Your job contains 1 sequence.
>028433
MLINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC
KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL
RHNGGHGGHNGLKSVMNNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL
LLSKGLTESARHFNTIQKYKHIRLQNMPA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028433
(209 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2183234 - symbol:AT5G19830 species:3702 "Arabi... 684 2.4e-67 1
TAIR|locus:2181412 - symbol:AT5G16140 species:3702 "Arabi... 486 2.3e-46 1
TAIR|locus:2173298 - symbol:AT5G38290 species:3702 "Arabi... 483 4.8e-46 1
TAIR|locus:2014134 - symbol:AT1G18440 species:3702 "Arabi... 468 1.9e-44 1
TIGR_CMR|CHY_0196 - symbol:CHY_0196 "peptidyl-tRNA hydrol... 274 6.8e-24 1
UNIPROTKB|P65865 - symbol:pth "Peptidyl-tRNA hydrolase" s... 261 1.6e-22 1
TIGR_CMR|BA_0050 - symbol:BA_0050 "peptidyl-tRNA hydrolas... 259 2.6e-22 1
TIGR_CMR|DET_0595 - symbol:DET_0595 "peptidyl-tRNA hydrol... 256 5.5e-22 1
TIGR_CMR|GSU_0663 - symbol:GSU_0663 "peptidyl-tRNA hydrol... 231 2.5e-19 1
TIGR_CMR|SPO_0811 - symbol:SPO_0811 "peptidyl-tRNA hydrol... 209 5.3e-17 1
TIGR_CMR|VC_2184 - symbol:VC_2184 "peptidyl-tRNA hydrolas... 205 1.4e-16 1
TIGR_CMR|ECH_0141 - symbol:ECH_0141 "peptidyl-tRNA hydrol... 193 2.6e-15 1
TIGR_CMR|CPS_3559 - symbol:CPS_3559 "peptidyl-tRNA hydrol... 185 1.8e-14 1
TIGR_CMR|SO_1184 - symbol:SO_1184 "peptidyl-tRNA hydrolas... 185 1.8e-14 1
UNIPROTKB|P0A7D1 - symbol:pth "peptidyl-tRNA hydrolase" s... 184 2.3e-14 1
TIGR_CMR|NSE_0307 - symbol:NSE_0307 "peptidyl-tRNA hydrol... 177 1.3e-13 1
UNIPROTKB|E1BK88 - symbol:PTRH1 "Uncharacterized protein"... 171 5.6e-13 1
UNIPROTKB|F1RS13 - symbol:PTRH1 "Uncharacterized protein"... 170 7.1e-13 1
UNIPROTKB|F1RS14 - symbol:PTRH1 "Uncharacterized protein"... 170 7.1e-13 1
TIGR_CMR|CBU_1841 - symbol:CBU_1841 "peptidyl-tRNA hydrol... 169 9.1e-13 1
TIGR_CMR|APH_1301 - symbol:APH_1301 "peptidyl-tRNA hydrol... 164 3.1e-12 1
UNIPROTKB|Q86Y79 - symbol:PTRH1 "Probable peptidyl-tRNA h... 158 1.3e-11 1
TIGR_CMR|CJE_0357 - symbol:CJE_0357 "peptidyl-tRNA hydrol... 156 2.2e-11 1
UNIPROTKB|C9J7Z1 - symbol:PTRH1 "Probable peptidyl-tRNA h... 153 4.5e-11 1
RGD|1310165 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 hom... 151 7.4e-11 1
UNIPROTKB|E2RR88 - symbol:PTRH1 "Uncharacterized protein"... 150 9.4e-11 1
ZFIN|ZDB-GENE-050306-33 - symbol:ptrh1 "peptidyl-tRNA hyd... 147 3.9e-10 1
MGI|MGI:1913779 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1... 141 8.4e-10 1
DICTYBASE|DDB_G0280507 - symbol:DDB_G0280507 "Peptidyl-tR... 99 2.9e-08 2
SGD|S000001232 - symbol:PTH1 "One of two mitochondrially-... 132 3.8e-08 1
>TAIR|locus:2183234 [details] [associations]
symbol:AT5G19830 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006412 "translation"
evidence=ISS] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 HSSP:P0A7D1 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 EMBL:AF296838 EMBL:BT011605 EMBL:BT012252
EMBL:AK227887 IPI:IPI00521866 RefSeq:NP_197484.4 UniGene:At.31249
ProteinModelPortal:Q6NLS8 SMR:Q6NLS8 STRING:Q6NLS8
EnsemblPlants:AT5G19830.1 GeneID:832103 KEGG:ath:AT5G19830
TAIR:At5g19830 InParanoid:Q6NLS8 OMA:FRKNREF PhylomeDB:Q6NLS8
ProtClustDB:CLSN2681642 Genevestigator:Q6NLS8 Uniprot:Q6NLS8
Length = 219
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 140/213 (65%), Positives = 159/213 (74%)
Query: 2 LINRFLRRGFCTA-VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC 60
+++R RR +CT+ V RPWLF+GLGNPGDKYKGTRHN +GFEMID FAES GI MN V+
Sbjct: 1 MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHN-IGFEMIDVFAESVGIQMNLVNF 59
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXX 120
KA GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGV
Sbjct: 60 KAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRL 119
Query: 121 XXXXXXXXXXXXKSVMNNFRG----------IGRPPGQMDPKAFLLQKFNAIARERIDTA 170
KSVMN+FRG IG+PPGQMDPKAFLLQKF+ ARER+D A
Sbjct: 120 QEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKA 179
Query: 171 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 203
L EGV+ LKL+L+K ES R FN QKYKH++
Sbjct: 180 LAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212
>TAIR|locus:2181412 [details] [associations]
symbol:AT5G16140 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 EMBL:AL391148 EMBL:BT010650 EMBL:AK175292
IPI:IPI00533319 PIR:T51484 RefSeq:NP_001078593.1 RefSeq:NP_197118.1
UniGene:At.31709 HSSP:P0A7D1 ProteinModelPortal:Q9LF14 SMR:Q9LF14
STRING:Q9LF14 PRIDE:Q9LF14 EnsemblPlants:AT5G16140.1
EnsemblPlants:AT5G16140.2 GeneID:831471 KEGG:ath:AT5G16140
GeneFarm:2616 TAIR:At5g16140 eggNOG:COG0193 HOGENOM:HOG000004797
InParanoid:Q9LF14 KO:K01056 OMA:SEFINDF PhylomeDB:Q9LF14
ProtClustDB:CLSN2686133 Genevestigator:Q9LF14 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 Uniprot:Q9LF14
Length = 240
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 98/193 (50%), Positives = 125/193 (64%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY GTRHN VGFEMID A +G+ MNT+ KA G G + D P+LLA
Sbjct: 45 PWLIVGLGNPGNKYHGTRHN-VGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLA 103
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMN 137
KPQTYMN SGES G LA++Y++PL +L+ +D+M LP GV KSVM
Sbjct: 104 KPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMG 163
Query: 138 ------NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 187
NF GIG+PPG MD KAFLLQKF+ + +++I+ AL++G E +K L+ G
Sbjct: 164 HLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFN 223
Query: 188 ESARHFNTIQKYK 200
+ FN +QKYK
Sbjct: 224 QGISRFNLVQKYK 236
>TAIR|locus:2173298 [details] [associations]
symbol:AT5G38290 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 EMBL:CP002688
GO:GO:0004045 HOGENOM:HOG000004797 KO:K01056
ProtClustDB:CLSN2686133 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AB011481 IPI:IPI00516328
RefSeq:NP_974860.1 UniGene:At.30420 ProteinModelPortal:A8MQQ3
SMR:A8MQQ3 STRING:A8MQQ3 PRIDE:A8MQQ3 EnsemblPlants:AT5G38290.2
GeneID:833811 KEGG:ath:AT5G38290 OMA:FEMIDHI Genevestigator:A8MQQ3
Uniprot:A8MQQ3
Length = 250
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 101/193 (52%), Positives = 125/193 (64%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN +GFEMID A + ISMNT+ KA G G VG+ P+LL
Sbjct: 55 PWLIVGLGNPGLKYYGTRHN-IGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLV 113
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSV-- 135
KPQ YMN SGES GPLAAYY++PL +L+ +DDMGL GV K+V
Sbjct: 114 KPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTE 173
Query: 136 -MNNFRG-------IGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 187
+N RG IG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G +
Sbjct: 174 HLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFS 233
Query: 188 ESARHFNTIQKYK 200
+S FN QKYK
Sbjct: 234 DSISRFNLGQKYK 246
>TAIR|locus:2014134 [details] [associations]
symbol:AT1G18440 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006783 "heme biosynthetic process"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0009570 EMBL:AC013354
GO:GO:0004045 PIR:C86318 HSSP:P0A7D1 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AK119054
EMBL:BT005284 IPI:IPI00539130 RefSeq:NP_173279.2 UniGene:At.22357
ProteinModelPortal:Q8GW64 SMR:Q8GW64 STRING:Q8GW64 PaxDb:Q8GW64
PRIDE:Q8GW64 EnsemblPlants:AT1G18440.1 GeneID:838424
KEGG:ath:AT1G18440 TAIR:At1g18440 InParanoid:Q8GW64 OMA:VINWVLK
PhylomeDB:Q8GW64 ProtClustDB:CLSN2918163 Genevestigator:Q8GW64
Uniprot:Q8GW64
Length = 288
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 91/188 (48%), Positives = 127/188 (67%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY+GTRHN VGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LA
Sbjct: 94 PWLIVGLGNPGKKYQGTRHN-VGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLA 152
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMN 137
KPQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G +S+++
Sbjct: 153 KPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIID 212
Query: 138 NFRG----------IGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 187
+G IGRPPG+MD F+L++FN +E +D Q G+E +++LL +G
Sbjct: 213 RLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFN 272
Query: 188 ESARHFNT 195
+SA NT
Sbjct: 273 KSATFVNT 280
>TIGR_CMR|CHY_0196 [details] [associations]
symbol:CHY_0196 "peptidyl-tRNA hydrolase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 EMBL:AF244580 RefSeq:YP_359068.1
ProteinModelPortal:Q9F8Q3 STRING:Q9F8Q3 GeneID:3726668
KEGG:chy:CHY_0196 PATRIC:21273573 OMA:IKFKTGG
BioCyc:CHYD246194:GJCN-197-MONOMER Uniprot:Q9F8Q3
Length = 187
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 64/185 (34%), Positives = 97/185 (52%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL K
Sbjct: 2 FIIAGLGNPGQEYENTRHN-AGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNN 138
PQTYMNLSG + ++YKLPL+R++V +DD+ LP G S+++
Sbjct: 61 PQTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISC 120
Query: 139 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 189
GIGRP D K ++LQ F RE ++ L+ E + + L++G ++
Sbjct: 121 LGSEEIPRLKIGIGRP-AVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKA 179
Query: 190 ARHFN 194
FN
Sbjct: 180 MTDFN 184
>UNIPROTKB|P65865 [details] [associations]
symbol:pth "Peptidyl-tRNA hydrolase" species:1773
"Mycobacterium tuberculosis" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005886 GO:GO:0005737 GO:GO:0040007
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 PIR:A70622 RefSeq:NP_215530.1
RefSeq:NP_335479.1 RefSeq:YP_006514375.1 PDB:2JRC PDB:2Z2I PDB:2Z2J
PDB:2Z2K PDB:3TCK PDB:3TCN PDB:3TD2 PDB:3TD6 PDBsum:2JRC
PDBsum:2Z2I PDBsum:2Z2J PDBsum:2Z2K PDBsum:3TCK PDBsum:3TCN
PDBsum:3TD2 PDBsum:3TD6 ProteinModelPortal:P65865 SMR:P65865
PRIDE:P65865 EnsemblBacteria:EBMYCT00000001706
EnsemblBacteria:EBMYCT00000072150 GeneID:13319576 GeneID:886037
GeneID:925158 KEGG:mtc:MT1042 KEGG:mtu:Rv1014c KEGG:mtv:RVBD_1014c
PATRIC:18124034 TubercuList:Rv1014c EvolutionaryTrace:P65865
Uniprot:P65865
Length = 191
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 66/189 (34%), Positives = 95/189 (50%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN +GF + D A G H + A G
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHN-LGFVVADLLAARLGAKFKA-HKRSGAEVATGRSAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXX 132
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G
Sbjct: 59 SLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGL 118
Query: 133 KSVM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 183
+SV+ +F+ GIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 119 RSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 184 KGLTESARH 192
+G+ E A++
Sbjct: 179 QGM-EPAQN 186
>TIGR_CMR|BA_0050 [details] [associations]
symbol:BA_0050 "peptidyl-tRNA hydrolase" species:198094
"Bacillus anthracis str. Ames" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:NP_842619.1 RefSeq:YP_016653.1
RefSeq:YP_026337.1 ProteinModelPortal:Q81VY9 DNASU:1087397
EnsemblBacteria:EBBACT00000008195 EnsemblBacteria:EBBACT00000017228
EnsemblBacteria:EBBACT00000022310 GeneID:1087397 GeneID:2819040
GeneID:2853113 KEGG:ban:BA_0050 KEGG:bar:GBAA_0050 KEGG:bat:BAS0050
OMA:KPETFMN BioCyc:BANT260799:GJAJ-57-MONOMER
BioCyc:BANT261594:GJ7F-59-MONOMER Uniprot:Q81VY9
Length = 186
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 64/185 (34%), Positives = 95/185 (51%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNN- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 139 ----FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 190
F+ GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIM 181
Query: 191 RHFNT 195
FN+
Sbjct: 182 NTFNS 186
>TIGR_CMR|DET_0595 [details] [associations]
symbol:DET_0595 "peptidyl-tRNA hydrolase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:YP_181337.1 ProteinModelPortal:Q3Z8W2
STRING:Q3Z8W2 GeneID:3230075 KEGG:det:DET0595 PATRIC:21608261
BioCyc:DETH243164:GJNF-596-MONOMER Uniprot:Q3Z8W2
Length = 189
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 63/188 (33%), Positives = 91/188 (48%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG +Y G RHN VGF+ + FA+ IS + C + G G + D ++LAKP
Sbjct: 3 LIIGLGNPGKEYSGNRHN-VGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNF 139
QTYMNLSG++ L Y L ++V DD+ LP G S++ +
Sbjct: 62 QTYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI 121
Query: 140 R---------GIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSKGLT 187
GIG+P + + + L F RE +D A+ E L LL+ GL
Sbjct: 122 GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGLD 181
Query: 188 ESARHFNT 195
++ FN+
Sbjct: 182 TASNRFNS 189
>TIGR_CMR|GSU_0663 [details] [associations]
symbol:GSU_0663 "peptidyl-tRNA hydrolase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:NP_951720.1 ProteinModelPortal:Q74FE6
GeneID:2685517 KEGG:gsu:GSU0663 PATRIC:22024085
BioCyc:GSUL243231:GH27-682-MONOMER Uniprot:Q74FE6
Length = 193
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 66/186 (35%), Positives = 92/186 (49%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY TRHN GF ++D A + G S+ FG+G +LL KP
Sbjct: 5 LIVGLGNPGPKYLWTRHN-AGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKP 63
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNF 139
QTYMNLSG S ++KLPL +V HDD+ +P G +S++
Sbjct: 64 QTYMNLSGRSVAEALRFHKLPLCDTIVIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQEL 123
Query: 140 RG---------IGRPPGQMDPKAFLLQKFNAIARERIDTA-LQEG-VEVLKLLLSKGLTE 188
G IGRP D ++L F+ E D A L +G +++L+ LL+ GL +
Sbjct: 124 GGAGFVRVRVGIGRPV-HGDVVNYVLTNFSQ--DEMADLAHLLDGTLDLLESLLTAGLPK 180
Query: 189 SARHFN 194
+ +N
Sbjct: 181 TMSLYN 186
>TIGR_CMR|SPO_0811 [details] [associations]
symbol:SPO_0811 "peptidyl-tRNA hydrolase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:KPETFMN RefSeq:YP_166064.1 ProteinModelPortal:Q5LV91
GeneID:3195572 KEGG:sil:SPO0811 PATRIC:23374899 Uniprot:Q5LV91
Length = 239
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 60/186 (32%), Positives = 88/186 (47%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG KY RHN +GF +D AE G V + +G +G VLL KP
Sbjct: 3 LFVGLGNPGAKYARNRHN-IGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMNNF 139
+T+MN SG+S G +YKL + V HD++ L G +S+ ++
Sbjct: 62 ETFMNRSGQSVGEAMRFYKLDSTDITVLHDELDLAPGKVKVKAGGGHAGHNGLRSIHDHI 121
Query: 140 R--------GIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 190
GIG P G+ + A ++L F + ++ L+ GV L+ G + A
Sbjct: 122 GAAYDRVRLGIGHP-GRKEAVAGYVLHDFARADEDWLEDVLR-GVSEGAPHLAAG--DGA 177
Query: 191 RHFNTI 196
R N++
Sbjct: 178 RFMNSV 183
>TIGR_CMR|VC_2184 [details] [associations]
symbol:VC_2184 "peptidyl-tRNA hydrolase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:C82107 RefSeq:NP_231815.1 ProteinModelPortal:Q9KQ21 SMR:Q9KQ21
DNASU:2613320 GeneID:2613320 KEGG:vch:VC2184 PATRIC:20083381
Uniprot:Q9KQ21
Length = 196
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 58/190 (30%), Positives = 93/190 (48%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAK 78
L VGL NPG +Y TRHN G +++ A +++ N G+ + + +
Sbjct: 7 LLVGLANPGPEYAKTRHN-AGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLI 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVM-- 136
P T+MNLSG++ LA +Y++ ++V HD++ LP GV K +
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 137 --NN---FR---GIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 187
NN +R GIG P G D A ++L K A +E +D A+ E V L++L+ GLT
Sbjct: 126 LGNNKEFYRLRLGIGHP-GHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLT 184
Query: 188 ESARHFNTIQ 197
++ +T +
Sbjct: 185 KAQNRLHTFK 194
>TIGR_CMR|ECH_0141 [details] [associations]
symbol:ECH_0141 "peptidyl-tRNA hydrolase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506969.1 ProteinModelPortal:Q2GHW4
STRING:Q2GHW4 GeneID:3927185 KEGG:ech:ECH_0141 PATRIC:20575827
OMA:YVLKPPR BioCyc:ECHA205920:GJNR-141-MONOMER Uniprot:Q2GHW4
Length = 198
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 61/197 (30%), Positives = 95/197 (48%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFA-ESQGISMNTVHCKATFGQGFVGDAPVLLA 77
+L GLGNPG KY+ +RHN GF ++DA A E S H A G + V+L
Sbjct: 3 YLLAGLGNPGKKYELSRHN-AGFMIVDAIASEFYFPSFRERH-NALISIGNIKSHRVILV 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVMN 137
KP T+MN SG +A+ YK+PL+ +++FHD++ + KS+ N
Sbjct: 61 KPWTFMNNSGAPIMSIASLYKIPLDNIIIFHDEVEINFCTIRVKKSGGNAGHNGLKSIDN 120
Query: 138 -----NFR---GIGRPPGQ----MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 185
+R GIGRP + +D ++L +F+ I + ++ + VE + LLL K
Sbjct: 121 LLGKDYWRVRFGIGRPINKTNLKIDLSYYVLSQFHNI--KAVNNTILNIVEHITLLLEKK 178
Query: 186 LTESARHFNTIQKYKHI 202
+ + KY+ I
Sbjct: 179 PSMFMEKVKNLIKYEDI 195
>TIGR_CMR|CPS_3559 [details] [associations]
symbol:CPS_3559 "peptidyl-tRNA hydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796
ProtClustDB:PRK05426 OMA:IKFKTGG RefSeq:YP_270233.1
ProteinModelPortal:Q47Y87 SMR:Q47Y87 STRING:Q47Y87 GeneID:3518514
KEGG:cps:CPS_3559 PATRIC:21470049
BioCyc:CPSY167879:GI48-3587-MONOMER Uniprot:Q47Y87
Length = 194
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 54/190 (28%), Positives = 88/190 (46%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAK 78
L GLGNPG +Y TRHN G ++ A S IS+ +G+G + V L
Sbjct: 5 LIAGLGNPGPEYSKTRHN-AGVWFVEELARSHNISLRPEKKYSGLYGKGLIAGNLVHLLI 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVM-- 136
P T+MN SG++ PLA +YK+ ++ +LV HD++ + GV + ++
Sbjct: 64 PTTFMNRSGQAVAPLANFYKISVDEILVAHDELDMLPGVCKIKKGGGHGGHNGLRDIIDR 123
Query: 137 --NN---FR---GIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 187
NN +R GI P G D +L K + + +I+ A+ E L + L L
Sbjct: 124 MANNKDFYRLRIGIDHP-GHRDKVTGHVLGKAPSAEQAKIEQAIDEASRCLDIWLKDDLK 182
Query: 188 ESARHFNTIQ 197
++ ++ +
Sbjct: 183 KAQNRLHSFK 192
>TIGR_CMR|SO_1184 [details] [associations]
symbol:SO_1184 "peptidyl-tRNA hydrolase" species:211586
"Shewanella oneidensis MR-1" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:IKFKTGG RefSeq:NP_716809.1 ProteinModelPortal:Q8EHN5 SMR:Q8EHN5
GeneID:1169013 KEGG:son:SO_1184 PATRIC:23522008 Uniprot:Q8EHN5
Length = 195
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFG---QGFVGDAPVLL 76
L VGL NPG +Y TRHN G ++ A G+S+ V FG + + V L
Sbjct: 6 LIVGLANPGAEYVQTRHN-AGAWYVEELARICGVSL--VADSKYFGLTARAVLHGKDVRL 62
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVM 136
P TYMNLSG++ G LA ++++ +LV HD++ +P GV K ++
Sbjct: 63 LIPTTYMNLSGKAVGALANFFRITPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDII 122
Query: 137 -------NNFR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 186
N +R GIG P + ++L K A +E I+ A+ E V ++L + +
Sbjct: 123 AKLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEILFKEDM 182
Query: 187 TESARHFNTIQ 197
++ ++ +
Sbjct: 183 VKAMTRLHSFK 193
>UNIPROTKB|P0A7D1 [details] [associations]
symbol:pth "peptidyl-tRNA hydrolase" species:83333
"Escherichia coli K-12" [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA;IMP]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006515
GO:GO:0004045 eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
HOGENOM:HOG000004796 EMBL:X61941 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:S16753 RefSeq:NP_415722.1 RefSeq:YP_489471.1 PDB:2PTH PDB:3VJR
PDBsum:2PTH PDBsum:3VJR ProteinModelPortal:P0A7D1 SMR:P0A7D1
DIP:DIP-35932N IntAct:P0A7D1 MINT:MINT-1225563 PRIDE:P0A7D1
EnsemblBacteria:EBESCT00000000501 EnsemblBacteria:EBESCT00000017627
GeneID:12933876 GeneID:945765 KEGG:ecj:Y75_p1176 KEGG:eco:b1204
PATRIC:32117660 EchoBASE:EB0778 EcoGene:EG10785
BioCyc:EcoCyc:EG10785-MONOMER BioCyc:ECOL316407:JW1195-MONOMER
BioCyc:MetaCyc:EG10785-MONOMER SABIO-RK:P0A7D1
EvolutionaryTrace:P0A7D1 Genevestigator:P0A7D1 Uniprot:P0A7D1
Length = 194
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFG---QGFVGDAPVLL 76
L VGL NPG +Y TRHN G +D AE + K FG + +G V L
Sbjct: 5 LIVGLANPGAEYAATRHN-AGAWFVDLLAERLRAPLRE-EAKF-FGYTSRVTLGGEDVRL 61
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVM 136
P T+MNLSG++ +A+++++ + +LV HD++ LP GV K ++
Sbjct: 62 LVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDII 121
Query: 137 N------NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 186
+ NF GIG P + F+L K ++ ID A+ E ++ + GL
Sbjct: 122 SKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGL 181
Query: 187 TESARHFNTIQ 197
T++ + +
Sbjct: 182 TKATNRLHAFK 192
>TIGR_CMR|NSE_0307 [details] [associations]
symbol:NSE_0307 "peptidyl-tRNA hydrolase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
GO:GO:0004045 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506197.1 ProteinModelPortal:Q2GE99
STRING:Q2GE99 GeneID:3931915 KEGG:nse:NSE_0307 PATRIC:22680705
OMA:LADIPIM BioCyc:NSEN222891:GHFU-333-MONOMER Uniprot:Q2GE99
Length = 194
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/186 (31%), Positives = 79/186 (42%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
R ++ GLGNPG +Y TRHN +GF +ID + G V + L
Sbjct: 5 RTFVLCGLGNPGLRYAQTRHN-LGFMLIDYVRYTFSFPEFLPKFSGLLSSGRVSSFLLYL 63
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKSVM 136
KP +MN SG L +YK+ L V+VFHDD+ L KS+
Sbjct: 64 FKPVAFMNNSGRPLVQLVNFYKVELENVIVFHDDIDLDFAKVKIKRGGGSGGHNGLKSLD 123
Query: 137 NN-------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 188
N FR G+GR G DP +L +F A+ ER++ L LLLS T
Sbjct: 124 FNLGRDYWRFRFGVGRGVG--DPAEHVLSRFTALELERLNKLFGFIGTNLPLLLSDIATR 181
Query: 189 SARHFN 194
+ N
Sbjct: 182 KEKFLN 187
>UNIPROTKB|E1BK88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:DAAA02032156 IPI:IPI00689946 Ensembl:ENSBTAT00000016930
Uniprot:E1BK88
Length = 216
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 54/194 (27%), Positives = 86/194 (44%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV 58
++R + R C RP WL GLGNPG GTRH+ VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPAGKRWLVAGLGNPG--LPGTRHS-VGMAVLGQLARRLGVAESWE 67
Query: 59 H---CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAY--YKLPLNRVLVFHDDMGL 113
C A Q +GDA ++L +P+ MNL+G S + L V + HD++
Sbjct: 68 RDRRCAADLAQASLGDAQLVLLRPRRLMNLNGHSVAQAGQVELFGLTAEEVYLVHDELDK 127
Query: 114 PCGVXXXXXXXXXXXXXXXKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIAR 164
P G +S M+ GIGRP + +A++L +F+ +
Sbjct: 128 PLGKVALKLGGSARGHNGVRSCMSCLNSNAMPRLQVGIGRPTHRDAVQAYVLGRFSPAEQ 187
Query: 165 ERIDTALQEGVEVL 178
E + L+ V++L
Sbjct: 188 ELLPPVLERAVDLL 201
>UNIPROTKB|F1RS13 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:FSSKHNA GeneTree:ENSGT00390000004247
EMBL:CU407281 Ensembl:ENSSSCT00000006175 Uniprot:F1RS13
Length = 213
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 54/192 (28%), Positives = 83/192 (43%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-- 56
++R + R C RP WL GLGNPG GTRH+ VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWLVAGLGNPG--LPGTRHS-VGMAVLGQLARRLGVAESWA 67
Query: 57 -TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 115
C A +GDA V+L +P+ MN +G S A + L V + HD++ P
Sbjct: 68 RDARCAADLALASLGDAQVVLLRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPL 127
Query: 116 GVXXXXXXXXXXXXXXXKS--------VMNNFR-GIGRPPGQMDPKAFLLQKFNAIARER 166
G +S M R GIGRP +A++L +F+ +E
Sbjct: 128 GKLALKLGGSARGHNGVRSCISCLNSNAMPRLRVGIGRPTHPDTVQAYVLGRFSLAEQEL 187
Query: 167 IDTALQEGVEVL 178
+ L+ ++L
Sbjct: 188 LPPLLERATDLL 199
>UNIPROTKB|F1RS14 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01196 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 GeneTree:ENSGT00390000004247 EMBL:CU407281
Ensembl:ENSSSCT00000006174 Uniprot:F1RS14
Length = 204
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 54/192 (28%), Positives = 83/192 (43%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-- 56
++R + R C RP WL GLGNPG GTRH+ VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWLVAGLGNPG--LPGTRHS-VGMAVLGQLARRLGVAESWA 67
Query: 57 -TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 115
C A +GDA V+L +P+ MN +G S A + L V + HD++ P
Sbjct: 68 RDARCAADLALASLGDAQVVLLRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPL 127
Query: 116 GVXXXXXXXXXXXXXXXKS--------VMNNFR-GIGRPPGQMDPKAFLLQKFNAIARER 166
G +S M R GIGRP +A++L +F+ +E
Sbjct: 128 GKLALKLGGSARGHNGVRSCISCLNSNAMPRLRVGIGRPTHPDTVQAYVLGRFSLAEQEL 187
Query: 167 IDTALQEGVEVL 178
+ L+ ++L
Sbjct: 188 LPPLLERATDLL 199
>TIGR_CMR|CBU_1841 [details] [associations]
symbol:CBU_1841 "peptidyl-tRNA hydrolase" species:227377
"Coxiella burnetii RSA 493" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:FSSKHNA RefSeq:NP_820820.1 ProteinModelPortal:Q83AP0
PRIDE:Q83AP0 GeneID:1209753 KEGG:cbu:CBU_1841 PATRIC:17932413
BioCyc:CBUR227377:GJ7S-1815-MONOMER Uniprot:Q83AP0
Length = 187
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 38/98 (38%), Positives = 54/98 (55%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA-PVLLAK 78
L GLGNPGD+Y TRHN VG ++ A+ + S+ K GFV L K
Sbjct: 7 LIAGLGNPGDQYARTRHN-VGAWFLETLAQQRNQSL----AKENKFHGFVAKCNDYWLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
P T+MN SG++ LA +YK+ + +L+ HD++ P G
Sbjct: 62 PTTFMNESGQAVAALAHFYKIKPSEILIAHDELDFPAG 99
>TIGR_CMR|APH_1301 [details] [associations]
symbol:APH_1301 "peptidyl-tRNA hydrolase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
RefSeq:YP_505815.1 ProteinModelPortal:Q2GII6 STRING:Q2GII6
GeneID:3930906 KEGG:aph:APH_1301 PATRIC:20951398 OMA:GDESGFM
ProtClustDB:PRK05426 BioCyc:APHA212042:GHPM-1303-MONOMER
Uniprot:Q2GII6
Length = 183
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN VGF +IDA A A G +G V+L KP
Sbjct: 3 LLVGLGNPGKRYAETRHN-VGFMIIDAVARGFFFPEFCSKHDALVSIGNIGTHRVMLMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
YMN SG S + +K+ + VFHDD+ L G
Sbjct: 62 LLYMNRSGTSVLSCTSMHKIAPEHITVFHDDVELQPG 98
>UNIPROTKB|Q86Y79 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:KPETFMN EMBL:BC047012
IPI:IPI00048572 RefSeq:NP_001002913.1 UniGene:Hs.653265
ProteinModelPortal:Q86Y79 SMR:Q86Y79 IntAct:Q86Y79 STRING:Q86Y79
PhosphoSite:Q86Y79 DMDM:74750555 PaxDb:Q86Y79 PRIDE:Q86Y79
DNASU:138428 Ensembl:ENST00000419060 Ensembl:ENST00000543175
GeneID:138428 KEGG:hsa:138428 UCSC:uc004bro.3 CTD:138428
GeneCards:GC09M130475 HGNC:HGNC:27039 HPA:HPA021223
neXtProt:NX_Q86Y79 PharmGKB:PA134917129 HOVERGEN:HBG067636
InParanoid:Q86Y79 OrthoDB:EOG4X3H2J PhylomeDB:Q86Y79
GenomeRNAi:138428 NextBio:83788 ArrayExpress:Q86Y79 Bgee:Q86Y79
CleanEx:HS_PTRH1 Genevestigator:Q86Y79 GermOnline:ENSG00000187024
Uniprot:Q86Y79
Length = 214
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/192 (27%), Positives = 81/192 (42%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV 58
++R + R C RP W+ GLGNPG GTRH+ VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWMVAGLGNPG--LPGTRHS-VGMAVLGQLARRLGVAESWT 67
Query: 59 ---HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 115
HC A +GDA ++L +P+ MN +G S A + L V + HD++ P
Sbjct: 68 RDRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPL 127
Query: 116 GVXXXXXXXXXXXXXXXKS--------VMNNFR-GIGRPPGQMDPKAFLLQKFNAIARER 166
G +S M R GIGRP +A +L F+ +E
Sbjct: 128 GRLALKLGGSARGHNGVRSCISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQEL 187
Query: 167 IDTALQEGVEVL 178
+ L +++
Sbjct: 188 LPLLLDRATDLI 199
>TIGR_CMR|CJE_0357 [details] [associations]
symbol:CJE_0357 "peptidyl-tRNA hydrolase" species:195099
"Campylobacter jejuni RM1221" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_178376.1 ProteinModelPortal:Q5HWF9
STRING:Q5HWF9 GeneID:3231119 KEGG:cjr:CJE0357 PATRIC:20042418
OMA:FSSKHNA BioCyc:CJEJ195099:GJC0-362-MONOMER Uniprot:Q5HWF9
Length = 181
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/97 (41%), Positives = 55/97 (56%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G +Y+ TRHN VGF +ID + + N + K G+ F + +LL KP
Sbjct: 3 LVVGLGNIGVEYENTRHN-VGFMLIDLLLKESNFT-NLTNSKFK-GELFKIGSSLLLLKP 59
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
TYMN SG S + +YK R++V HDD+ + G
Sbjct: 60 STYMNNSGLSVKAVNDFYKC--ERMIVIHDDIDINLG 94
>UNIPROTKB|C9J7Z1 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] InterPro:IPR001328 Pfam:PF01195
GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
HGNC:HGNC:27039 OrthoDB:EOG4X3H2J EMBL:AL162426 IPI:IPI00945330
ProteinModelPortal:C9J7Z1 SMR:C9J7Z1 STRING:C9J7Z1
Ensembl:ENST00000423807 UCSC:uc010mxm.3 ArrayExpress:C9J7Z1
Bgee:C9J7Z1 Uniprot:C9J7Z1
Length = 182
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV 58
++R + R C RP W+ GLGNPG GTRH+ VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWMVAGLGNPG--LPGTRHS-VGMAVLGQLARRLGVAESWT 67
Query: 59 ---HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPC 115
HC A +GDA ++L +P+ MN +G S A + L V + HD++ P
Sbjct: 68 RDRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPL 127
Query: 116 G 116
G
Sbjct: 128 G 128
>RGD|1310165 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001328 Pfam:PF01195 RGD:1310165
RGD:1359111 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 IPI:IPI00780687 Ensembl:ENSRNOT00000060258
ArrayExpress:F1M8A9 Uniprot:F1M8A9
Length = 208
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVL 75
WL GLGNPG GTRH+ VG ++ A+ G++ N C A GDA ++
Sbjct: 34 WLVAGLGNPG--MPGTRHS-VGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLV 90
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
L +P+ MN++G S A + L + + HD++ P G
Sbjct: 91 LLRPRRLMNVNGRSVAKAAELFGLSAEEIYLVHDELDKPLG 131
>UNIPROTKB|E2RR88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:AAEX03006864 Ensembl:ENSCAFT00000032028 Uniprot:E2RR88
Length = 215
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 48/173 (27%), Positives = 71/173 (41%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVL 75
WL GLGNPG TRH+ VG ++ A G++ C A + DA ++
Sbjct: 31 WLVAGLGNPG--LPSTRHS-VGLAVLGQLARRLGVADGWARDRRCAADLALASLDDAQLV 87
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXX--- 132
L +P+ MN +G S A + L V + HD++ P G
Sbjct: 88 LLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALKLGGSSRRGHNGVRS 147
Query: 133 ------KSVMNNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 178
S M R GIGRP KA++L F+A +E + L+ ++L
Sbjct: 148 CISCLNSSAMPRLRVGIGRPTEPDTVKAYVLGCFSAAEQELLPPLLERATDLL 200
>ZFIN|ZDB-GENE-050306-33 [details] [associations]
symbol:ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
ZFIN:ZDB-GENE-050306-33 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 HOVERGEN:HBG067636
OrthoDB:EOG4X3H2J GeneTree:ENSGT00390000004247 EMBL:BX001023
IPI:IPI00481323 RefSeq:NP_001119866.1 UniGene:Dr.88889
Ensembl:ENSDART00000142927 KEGG:dre:559192 InParanoid:A2BDR2
OMA:GKGLIGD NextBio:20882835 Uniprot:A2BDR2
Length = 266
Score = 147 (56.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 52/195 (26%), Positives = 86/195 (44%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG---DAPVLL 76
+ VGLGNPG G+RH+ VG ++ AE G + G+ V D ++L
Sbjct: 58 MVVGLGNPG--MTGSRHS-VGMAVLTTLAERLGAPDGWRSDRKVSGEVVVTQLQDVQLVL 114
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXKS-- 134
+P+ MN++G S A+ Y + +L+ HD++ P G +S
Sbjct: 115 LRPKLLMNVNGVSVAKAASRYLIQPEHILLIHDELDKPLGKFGIKHGGSARGHNGVRSCV 174
Query: 135 ------VMNNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL--SKG 185
VM R GIGRP + ++L +F+ + +D+ +++ ++VL L S+
Sbjct: 175 DCLQTDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQNVLDSVIKQSLDVLLDYLTDSRS 234
Query: 186 LTESARHFNTIQKYK 200
T A QK K
Sbjct: 235 QTSPAEGRRAAQKKK 249
>MGI|MGI:1913779 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 MGI:MGI:1913779 GO:GO:0005739 GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:FSSKHNA CTD:138428
HOVERGEN:HBG067636 OrthoDB:EOG4X3H2J EMBL:AK075833 EMBL:BC098218
IPI:IPI00225955 RefSeq:NP_848710.1 UniGene:Mm.268037
ProteinModelPortal:Q8BW00 SMR:Q8BW00 STRING:Q8BW00
PhosphoSite:Q8BW00 PaxDb:Q8BW00 PRIDE:Q8BW00
Ensembl:ENSMUST00000066352 GeneID:329384 KEGG:mmu:329384
GeneTree:ENSGT00390000004247 ChiTaRS:PTRH1 NextBio:398724
Bgee:Q8BW00 CleanEx:MM_PTRH1 Genevestigator:Q8BW00
GermOnline:ENSMUSG00000053746 Uniprot:Q8BW00
Length = 204
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVL 75
WL GLGN G GTRH+ VG ++ A G++ N C A +GDA ++
Sbjct: 21 WLVAGLGNHG--MPGTRHS-VGMAVLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLV 77
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
L +P+ MN++G S A + L + + HD++ P G
Sbjct: 78 LLRPRRLMNVNGRSVARAAELFGLTAEEIYLVHDELDKPLG 118
>DICTYBASE|DDB_G0280507 [details] [associations]
symbol:DDB_G0280507 "Peptidyl-tRNA hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
dictyBase:DDB_G0280507 EMBL:AAFI02000036 GO:GO:0004045
eggNOG:COG0193 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 RefSeq:XP_641213.1 ProteinModelPortal:Q54V95
STRING:Q54V95 EnsemblProtists:DDB0205243 GeneID:8622594
KEGG:ddi:DDB_G0280507 InParanoid:Q54V95 Uniprot:Q54V95
Length = 452
Score = 99 (39.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 32/110 (29%), Positives = 46/110 (41%)
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVXXXXXXXXXXXXXXXK 133
V+L KP TYMN SG + Y +PL +LV DD+ GV +
Sbjct: 322 VILLKPMTYMNASGNPLRTIQQKYNVPLQNILVLVDDISTDIGVIKMRTKGGSAGQKGIE 381
Query: 134 SVMNNFR---------GIGRPPGQMDPKAFLLQKFNA----IARERIDTA 170
SV++ G+G P F+L+KF+ + +E ID A
Sbjct: 382 SVISRLGTEKFSRIKFGVGVPNAGEIRSNFVLKKFSREKEHLLKESIDKA 431
Score = 91 (37.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAE 49
V ++ VGLGNPG +Y TRHN +GF ID E
Sbjct: 162 VKNRYIIVGLGNPGTEYVNTRHN-IGFSAIDHLCE 195
>SGD|S000001232 [details] [associations]
symbol:PTH1 "One of two mitochondrially-localized
peptidyl-tRNA hydrolases" species:4932 "Saccharomyces cerevisiae"
[GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA;IGI;IDA] [GO:0032543 "mitochondrial translation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
SGD:S000001232 GO:GO:0005739 EMBL:BK006934 GO:GO:0032543
EMBL:U00030 GO:GO:0004045 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 KO:K11270 RefSeq:NP_012061.3 GeneID:856598
KEGG:sce:YHR191C RefSeq:NP_012059.3 GeneID:856596 KEGG:sce:YHR189W
GeneTree:ENSGT00390000004247 OrthoDB:EOG4GXJXH PIR:S46683
ProteinModelPortal:P38876 SMR:P38876 DIP:DIP-5239N MINT:MINT-556852
STRING:P38876 PRIDE:P38876 EnsemblFungi:YHR189W CYGD:YHR189w
OMA:KYTLLQS NextBio:982484 Genevestigator:P38876 GermOnline:YHR189W
Uniprot:P38876
Length = 190
Score = 132 (51.5 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 50/173 (28%), Positives = 73/173 (42%)
Query: 19 WLFV--GLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQ-GFVGDAP- 73
W V G+GNP +Y GTRHN VG M++ + G+ T T G+ ++ D
Sbjct: 5 WRLVLTGIGNPEPQYAGTRHN-VGLYMLELLRKRLGLQGRTYSPVPNTGGKVHYIEDEHC 63
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG-VXXXXXXXXXXXXXXX 132
+L YMNLSGE + A Y R +V HD++ + CG V
Sbjct: 64 TILRSDGQYMNLSGEQVCKVWARYAKYQARHVVIHDELSVACGKVQLRAPSTSIRGHNGL 123
Query: 133 KSVMN------NFR----GIGRPPGQM--DPKAFLLQKFNAIARERIDTALQE 173
+S++ F GIGR PG DP + A+ + + T L +
Sbjct: 124 RSLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLLTQ 176
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 194 0.00076 111 3 11 22 0.42 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 591 (63 KB)
Total size of DFA: 155 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.91u 0.13s 15.04t Elapsed: 00:00:01
Total cpu time: 14.91u 0.14s 15.05t Elapsed: 00:00:01
Start: Fri May 10 20:17:47 2013 End: Fri May 10 20:17:48 2013