Query 028434
Match_columns 209
No_of_seqs 140 out of 865
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 11:28:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028434.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028434hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02314 pectinesterase 100.0 3.1E-33 6.7E-38 258.3 20.6 161 47-208 68-234 (586)
2 TIGR01614 PME_inhib pectineste 100.0 6E-33 1.3E-37 221.9 19.0 174 12-207 4-177 (178)
3 PLN02484 probable pectinestera 100.0 7.7E-33 1.7E-37 255.3 19.6 156 48-208 72-227 (587)
4 PLN02313 Pectinesterase/pectin 100.0 2E-32 4.4E-37 252.7 21.7 161 48-208 58-220 (587)
5 PLN02468 putative pectinestera 100.0 2.3E-32 5.1E-37 251.4 19.4 154 48-208 63-217 (565)
6 smart00856 PMEI Plant invertas 100.0 8E-32 1.7E-36 208.9 16.9 147 47-203 2-148 (148)
7 PLN02995 Probable pectinestera 100.0 6.7E-32 1.4E-36 247.0 19.0 182 11-208 9-191 (539)
8 PLN02217 probable pectinestera 100.0 1.2E-31 2.5E-36 249.1 19.6 158 47-208 51-208 (670)
9 PLN02990 Probable pectinestera 100.0 2.9E-31 6.4E-36 244.2 19.9 157 48-208 52-210 (572)
10 PLN02713 Probable pectinestera 100.0 1.6E-31 3.6E-36 245.6 17.4 154 50-206 33-188 (566)
11 PLN02506 putative pectinestera 100.0 9.2E-31 2E-35 239.2 19.0 167 39-208 24-192 (537)
12 PLN02745 Putative pectinestera 100.0 2E-30 4.3E-35 239.5 21.0 156 45-208 75-232 (596)
13 PLN02708 Probable pectinestera 100.0 1.5E-30 3.2E-35 239.0 19.5 157 43-207 38-195 (553)
14 PLN02416 probable pectinestera 100.0 1.9E-30 4.1E-35 237.5 19.6 165 38-208 27-192 (541)
15 PLN02197 pectinesterase 100.0 2.3E-30 4.9E-35 238.3 18.9 154 47-208 36-191 (588)
16 PLN02301 pectinesterase/pectin 100.0 1E-29 2.3E-34 232.6 19.7 154 45-208 46-201 (548)
17 PF04043 PMEI: Plant invertase 100.0 3.5E-29 7.5E-34 194.4 15.2 148 47-203 2-152 (152)
18 PLN02698 Probable pectinestera 100.0 3.1E-29 6.7E-34 227.8 17.2 157 44-208 17-177 (497)
19 PLN03043 Probable pectinestera 100.0 1.3E-28 2.7E-33 225.6 16.3 150 53-206 3-156 (538)
20 PLN02933 Probable pectinestera 99.9 5E-23 1.1E-27 187.6 18.1 127 77-208 48-182 (530)
21 PLN02201 probable pectinestera 99.9 7.3E-23 1.6E-27 186.5 15.3 125 80-207 37-163 (520)
22 PLN02488 probable pectinestera 99.9 1.4E-22 3.1E-27 182.8 14.3 150 54-208 3-160 (509)
23 PLN02170 probable pectinestera 99.9 5.9E-22 1.3E-26 180.1 14.2 173 8-208 12-185 (529)
24 PLN02916 pectinesterase family 99.7 1.7E-16 3.6E-21 144.1 11.3 86 110-208 56-141 (502)
25 KOG1733 Mitochondrial import i 69.3 39 0.00084 24.1 9.0 51 88-138 28-85 (97)
26 PF06404 PSK: Phytosulfokine p 63.9 7 0.00015 27.3 2.5 42 26-67 8-63 (81)
27 PF07870 DUF1657: Protein of u 56.5 47 0.001 20.8 6.4 45 89-134 3-47 (50)
28 KOG4514 Uncharacterized conser 51.3 91 0.002 25.3 7.1 58 77-139 121-179 (222)
29 PF02953 zf-Tim10_DDP: Tim10/D 47.4 56 0.0012 21.2 4.7 29 110-138 36-64 (66)
30 PF10907 DUF2749: Protein of u 44.6 19 0.00042 23.9 2.0 34 13-46 1-34 (66)
31 PF11172 DUF2959: Protein of u 43.0 1.6E+02 0.0034 24.2 7.4 83 55-139 6-89 (201)
32 PF14290 DUF4370: Domain of un 39.4 2.2E+02 0.0047 23.5 7.7 59 116-175 130-188 (239)
33 KOG4841 Dolichol-phosphate man 28.4 46 0.00099 23.5 1.9 27 117-143 65-91 (95)
34 PF15339 Afaf: Acrosome format 24.9 69 0.0015 25.7 2.5 20 11-30 137-156 (200)
35 PF09125 COX2-transmemb: Cytoc 23.2 1.3E+02 0.0028 17.7 2.8 15 12-26 18-32 (38)
36 PF08285 DPM3: Dolichol-phosph 22.7 60 0.0013 23.1 1.7 26 118-143 62-87 (91)
37 COG4383 Mu-like prophage prote 20.5 2.3E+02 0.0049 25.9 5.1 68 76-163 437-504 (517)
No 1
>PLN02314 pectinesterase
Probab=100.00 E-value=3.1e-33 Score=258.33 Aligned_cols=161 Identities=29% Similarity=0.510 Sum_probs=141.4
Q ss_pred chhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHH
Q 028434 47 SSTEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENT 126 (209)
Q Consensus 47 ~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely 126 (209)
.+...|+.+|++|+||++|+++|++.|.+...+|++|++++++++++++..+...+++++.. +.+++.+.||+||+|+|
T Consensus 68 ~~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-~~~~~~k~AL~DC~Ell 146 (586)
T PLN02314 68 TPATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-TNDERLKSALRVCETLF 146 (586)
T ss_pred CHHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHH
Confidence 35679999999999999999999999988788999999999999999999999999988754 47899999999999999
Q ss_pred HhHHHHHHHHHHHHhcCCCCc--chhhhhhHHHHHHHhhcChhhHhhhcCCCCC----CchhhhhHHHHHHHHHHHHHHH
Q 028434 127 RDSVDELQQSLQAMKDLKGPE--FEFKINDLQTWVSAALTNEDTCMDNFEGNGV----NGKVKDTIRGRIVRASQLISNA 200 (209)
Q Consensus 127 ~~a~d~L~~a~~~l~~~~~~~--~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~----~~~~~s~l~~~~~~~~~L~sna 200 (209)
++++|+|++++.+|...+... ..+.++|++||||||||||+||+|||++.+. ++.+++.|...+.++.+|+||+
T Consensus 147 ddAid~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNa 226 (586)
T PLN02314 147 DDAIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNS 226 (586)
T ss_pred HHHHHHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997543211 1346799999999999999999999986532 4568888989999999999999
Q ss_pred HHHHHhhc
Q 028434 201 LALINQLN 208 (209)
Q Consensus 201 Laii~~l~ 208 (209)
|||++++.
T Consensus 227 LAIi~~l~ 234 (586)
T PLN02314 227 LAIVSKIL 234 (586)
T ss_pred HHHHhhhc
Confidence 99999864
No 2
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=6e-33 Score=221.95 Aligned_cols=174 Identities=36% Similarity=0.532 Sum_probs=150.6
Q ss_pred hhHHHHHHHHHHHHHHhhhcccccccCCCCCCCCcchhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHH
Q 028434 12 CYSLAIIITLLYFCTTTTCLPTRLLVQQSPVKSNSSSTEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVS 91 (209)
Q Consensus 12 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a 91 (209)
.|+++++++||.++.+..+ + +...+...|+.+|++|+||++|+++|.++|++...|+++++.++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a 71 (178)
T TIGR01614 4 SLSLLLFLLLLSLVATSSS-----------N-SLNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAA 71 (178)
T ss_pred hHHHHHHHHHHcccccccc-----------c-CCcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 4556666666555444333 3 456777899999999999999999999999887789999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhh
Q 028434 92 LNEAKSTSALVLKLSKGLELRPREASAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMD 171 (209)
Q Consensus 92 ~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~D 171 (209)
..+++.+...+.++.+.. +++..+.+++||.++|++++++|+++..+++. ++ ++|+++|||+|+++++||+|
T Consensus 72 ~~~~~~~~~~i~~l~~~~-~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~---~~----~~d~~~~ls~a~~~~~tC~d 143 (178)
T TIGR01614 72 LSNASDTLDHISKLLLTK-GDPRDKSALEDCVELYSDAVDALDKALASLKS---KD----YSDAETWLSSALTDPSTCED 143 (178)
T ss_pred HHHHHHHHHHHHHHHccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cc----hhHHHHHHHHHHcccchHHH
Confidence 999999999999997654 47889999999999999999999999999985 23 48999999999999999999
Q ss_pred hcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 028434 172 NFEGNGVNGKVKDTIRGRIVRASQLISNALALINQL 207 (209)
Q Consensus 172 gf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~l 207 (209)
||.+. ++..+++|..+++++.+|++|+|+|++++
T Consensus 144 ~f~~~--~~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 144 GFEEL--GGIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred HhccC--CCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99874 23568899999999999999999999886
No 3
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=7.7e-33 Score=255.32 Aligned_cols=156 Identities=33% Similarity=0.582 Sum_probs=136.5
Q ss_pred hhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHH
Q 028434 48 STEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENTR 127 (209)
Q Consensus 48 ~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely~ 127 (209)
+...|+.+|++|+||++|+++|++.|.+...+|++|++++++++++++.++......+.. .+.+++.+.||+||+|+|+
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-~~~~~r~k~AL~DClELld 150 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-VQMPPRVRSAYDSCLELLD 150 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Confidence 556999999999999999999999998777899999999999999999987766554433 4578899999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 028434 128 DSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQL 207 (209)
Q Consensus 128 ~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~l 207 (209)
+++|+|++++.+|...+. ....+|++||||||||||+||+|||++.+ ++.++++|.+.+.++.+|+||+|||++++
T Consensus 151 dAid~L~~Sl~~l~~~~~---~~~~~DvkTWLSAALTnq~TClDGF~e~~-~~~vk~~m~~~l~~l~~LtSNALAIi~~~ 226 (587)
T PLN02484 151 DSVDALSRALSSVVPSSG---GGSPQDVVTWLSAALTNHDTCTEGFDGVN-GGEVKDQMTGALKDLSELVSNCLAIFSAS 226 (587)
T ss_pred HHHHHHHHHHHHHhcccc---ccchHHHHhHHHHHhccHhhHHHHhhccc-ccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999985321 23569999999999999999999998642 35689999999999999999999999886
Q ss_pred c
Q 028434 208 N 208 (209)
Q Consensus 208 ~ 208 (209)
.
T Consensus 227 ~ 227 (587)
T PLN02484 227 N 227 (587)
T ss_pred c
Confidence 4
No 4
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2e-32 Score=252.73 Aligned_cols=161 Identities=30% Similarity=0.536 Sum_probs=141.1
Q ss_pred hhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCHhHHHHHHHHHHHH
Q 028434 48 STEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGL-ELRPREASAVKDCVENT 126 (209)
Q Consensus 48 ~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~-~~~~~~~~al~dC~ely 126 (209)
.+..|+.+|+.|+||++|+++|++.+.+...+++++++++++++++++..+...+++++... +.+++.+.||+||+|+|
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl 137 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI 137 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 55699999999999999999999988776779999999999999999999999999887532 56889999999999999
Q ss_pred HhHHHHHHHHHHHHhcCCC-CcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 028434 127 RDSVDELQQSLQAMKDLKG-PEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALIN 205 (209)
Q Consensus 127 ~~a~d~L~~a~~~l~~~~~-~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~ 205 (209)
++++|+|++++.++...+. +...++.+|++||||||||||+||+|||++.+.++.+++.|...+.++.+|+||+|||++
T Consensus 138 ddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv~ 217 (587)
T PLN02313 138 DETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIK 217 (587)
T ss_pred HHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999985322 222345799999999999999999999986544567889999999999999999999998
Q ss_pred hhc
Q 028434 206 QLN 208 (209)
Q Consensus 206 ~l~ 208 (209)
++.
T Consensus 218 ~~~ 220 (587)
T PLN02313 218 NMT 220 (587)
T ss_pred ccc
Confidence 764
No 5
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.3e-32 Score=251.38 Aligned_cols=154 Identities=29% Similarity=0.429 Sum_probs=136.6
Q ss_pred hhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCHhHHHHHHHHHHHH
Q 028434 48 STEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGL-ELRPREASAVKDCVENT 126 (209)
Q Consensus 48 ~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~-~~~~~~~~al~dC~ely 126 (209)
.+..|+.+|+.|+||++|+++|++.|.+...+|++|++++++++++++..+...+.++.... +.+++.+.|++||.|+|
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELl 142 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELL 142 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHH
Confidence 45699999999999999999999999877789999999999999999999998888776432 35789999999999999
Q ss_pred HhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 028434 127 RDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQ 206 (209)
Q Consensus 127 ~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~ 206 (209)
++++|+|++++.++.... . .+..+|++||||||||||+||+|||++. .++++|...+.++.+|+||+|||+++
T Consensus 143 ddaid~L~~Sl~~l~~~~--~-~~~~dDl~TWLSAAlTnq~TClDGF~e~----~vk~~~~~~l~n~~eLtSNaLAIi~~ 215 (565)
T PLN02468 143 DLAIDNLNNSLTSSGGVS--V-LDNVDDLRTWLSSAGTYQETCIDGLAEP----NLKSFGENHLKNSTELTSNSLAIITW 215 (565)
T ss_pred HHHHHHHHHHHHHHhccc--c-ccchHHHHHHHHHHhcchhhhhhhhccc----CchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999987432 1 3456999999999999999999999863 47889999999999999999999997
Q ss_pred hc
Q 028434 207 LN 208 (209)
Q Consensus 207 l~ 208 (209)
+.
T Consensus 216 l~ 217 (565)
T PLN02468 216 IG 217 (565)
T ss_pred cc
Confidence 64
No 6
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=8e-32 Score=208.86 Aligned_cols=147 Identities=41% Similarity=0.675 Sum_probs=135.1
Q ss_pred chhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHH
Q 028434 47 SSTEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENT 126 (209)
Q Consensus 47 ~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely 126 (209)
...+.|+.+|++|+||++|+++|.++|++...|++++++++++.+++++..+...++++.+. +.+++.+.+++||.++|
T Consensus 2 ~~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~-~~~~~~~~al~~C~~~y 80 (148)
T smart00856 2 PTSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLKK-TKDPRLKAALKDCLELY 80 (148)
T ss_pred CHHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHH
Confidence 45788999999999999999999999988888999999999999999999999999998764 47899999999999999
Q ss_pred HhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHH
Q 028434 127 RDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALAL 203 (209)
Q Consensus 127 ~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLai 203 (209)
++++++|++++.++..+ + ++|+++|||+|++|++||+|||.+. ++.++++|...+.++.+|++|+|+|
T Consensus 81 ~~a~~~L~~a~~~l~~~---~----~~d~~~~lsaa~t~~~tC~d~f~~~--~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 81 DDAVDSLEKALEELKSG---D----YDDVATWLSAALTDQDTCLDGFEEN--DDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHHhc---c----hhHHHHHHHHHhcCcchHHhHhccC--CcchhHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999863 2 4899999999999999999999873 3567899999999999999999986
No 7
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=6.7e-32 Score=247.00 Aligned_cols=182 Identities=26% Similarity=0.334 Sum_probs=143.8
Q ss_pred chhHHHHHHHHHHHHHHhhhcccccccCCCCCCCCcchhHHHHhccCCCCChhhHHHhhhccCCCCC-CCHHHHHHHHHH
Q 028434 11 SCYSLAIIITLLYFCTTTTCLPTRLLVQQSPVKSNSSSTEFIKTSCRVTLYPDLCYNTLSSYASTIQ-TNPTELANAALS 89 (209)
Q Consensus 11 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~-~d~~~l~~~ai~ 89 (209)
+|+||.+||+|++++...+. ...++ ...|+..|+.|+||++|+++|.+.|.+.. .++.++++++++
T Consensus 9 ~~~~~~~ll~~~~~~~~~~~-----------~~~~~--~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~ 75 (539)
T PLN02995 9 SFLSLHLLLLLLLCVHPLTT-----------VADGN--STDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVE 75 (539)
T ss_pred hHHHHHHHHHHHHHhhhccc-----------CCCCh--hHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHH
Confidence 58888888887776554444 11111 34999999999999999999999887533 489999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhH
Q 028434 90 VSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTC 169 (209)
Q Consensus 90 ~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC 169 (209)
++++++..+...+..+.+. ..+++.+.|++||.|+|++++|+|++++.+++...........+|++|||||||||++||
T Consensus 76 aAl~~a~sa~~~i~~l~~~-~~~~r~~~AL~DC~ELl~DAvD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC 154 (539)
T PLN02995 76 AAMDRAISARDELTNSGKN-CTDFKKQAVLADCIDLYGDTIMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETC 154 (539)
T ss_pred HHHHHHHHHHHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhh
Confidence 9999999999999888543 367889999999999999999999999999975322111224579999999999999999
Q ss_pred hhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 028434 170 MDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQLN 208 (209)
Q Consensus 170 ~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~l~ 208 (209)
+|||++.+..+.+++.+. ..++.+|+||+|||++++.
T Consensus 155 ~DGF~~~~~~~~v~~~v~--~~~~~~ltSNaLAi~~~l~ 191 (539)
T PLN02995 155 RRGSSDLNVSDFITPIVS--NTKISHLISNCLAVNGALL 191 (539)
T ss_pred hhhhccccchhhhhhhhh--hhhHHHHHHHHHHHhhhhc
Confidence 999987533333333333 2689999999999998864
No 8
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.2e-31 Score=249.05 Aligned_cols=158 Identities=26% Similarity=0.480 Sum_probs=136.8
Q ss_pred chhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHH
Q 028434 47 SSTEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENT 126 (209)
Q Consensus 47 ~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely 126 (209)
+..+.|+..|+.|+||++|+++|+..+ ....+|++|++.+++++++++..+...++++... ..+++++.|++||+|+|
T Consensus 51 ~~~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~-~~~~r~k~AL~DClELl 128 (670)
T PLN02217 51 TSVKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIEL-QKDPRTKMALDQCKELM 128 (670)
T ss_pred hHHHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCChHHHHHHHHHHHHH
Confidence 445699999999999999999999987 4566999999999999999999999888888432 45789999999999999
Q ss_pred HhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 028434 127 RDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQ 206 (209)
Q Consensus 127 ~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~ 206 (209)
++++|+|++++.++...+...+....+|++||||||||||+||+|||++. ++.+++.|...+.++.+|+||+|||+++
T Consensus 129 ddAvDeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~--~~~vk~~m~~~l~nvseLtSNALAmv~~ 206 (670)
T PLN02217 129 DYAIGELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGT--QGNAGETIKKALKTAVQLTHNGLAMVSE 206 (670)
T ss_pred HHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhh--chHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999743222223456999999999999999999999863 3568889999999999999999999987
Q ss_pred hc
Q 028434 207 LN 208 (209)
Q Consensus 207 l~ 208 (209)
+.
T Consensus 207 ls 208 (670)
T PLN02217 207 MS 208 (670)
T ss_pred cc
Confidence 64
No 9
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=2.9e-31 Score=244.21 Aligned_cols=157 Identities=23% Similarity=0.417 Sum_probs=136.0
Q ss_pred hhHHHHhccCCCCChhhHHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCHhHHHHHHHHHHH
Q 028434 48 STEFIKTSCRVTLYPDLCYNTLSS-YASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKG-LELRPREASAVKDCVEN 125 (209)
Q Consensus 48 ~~~~I~~~C~~T~~p~lC~~tL~~-~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~-~~~~~~~~~al~dC~el 125 (209)
.+..|+.+|+.|+||++|+++|++ .+. ..+|++|++.+++++++++..+...+.+++.. .+.+++++.|++||+|+
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence 456999999999999999999998 443 46899999999999999999999888877643 25789999999999999
Q ss_pred HHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 028434 126 TRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALIN 205 (209)
Q Consensus 126 y~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~ 205 (209)
|++++|+|++++.+|+..+...+...++|++||||||||||+||+|||++. ++.+++.|...+.++.+|+||+|||++
T Consensus 130 lddAvdeL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~--~s~lk~~~~~~l~nv~~LtSNALAiv~ 207 (572)
T PLN02990 130 MNDATDDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEI--KSNLSQDMLKIFKTSRELTSNGLAMIT 207 (572)
T ss_pred HHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhcc--chhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999853323333457999999999999999999999863 356888999999999999999999999
Q ss_pred hhc
Q 028434 206 QLN 208 (209)
Q Consensus 206 ~l~ 208 (209)
++.
T Consensus 208 ~~~ 210 (572)
T PLN02990 208 NIS 210 (572)
T ss_pred hhh
Confidence 764
No 10
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1.6e-31 Score=245.61 Aligned_cols=154 Identities=23% Similarity=0.298 Sum_probs=133.1
Q ss_pred HHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--CCHhHHHHHHHHHHHHH
Q 028434 50 EFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLE--LRPREASAVKDCVENTR 127 (209)
Q Consensus 50 ~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~--~~~~~~~al~dC~ely~ 127 (209)
..++..|+.|+||++|+++|+.. ...+++++++++++++++++..+...++++.+..+ .+++++.|++||+|+|+
T Consensus 33 ~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC~ELld 109 (566)
T PLN02713 33 VSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDCQFLAG 109 (566)
T ss_pred CCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHH
Confidence 34577899999999999999862 24689999999999999999999999998876443 38899999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 028434 128 DSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQ 206 (209)
Q Consensus 128 ~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~ 206 (209)
+++|+|++++.+++..+...+.+..+|++||||||||||+||+|||.+.+.++.+++.|...+.++.+|+||+|||++.
T Consensus 110 davD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaLAlv~~ 188 (566)
T PLN02713 110 LNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSLALFTK 188 (566)
T ss_pred HHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999854322234567999999999999999999999876445567888999999999999999999986
No 11
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=9.2e-31 Score=239.21 Aligned_cols=167 Identities=29% Similarity=0.465 Sum_probs=140.5
Q ss_pred CCCCCCCcchhHHHHhccCCCCChhhHHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHH
Q 028434 39 QSPVKSNSSSTEFIKTSCRVTLYPDLCYNTLSSYAST-IQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREAS 117 (209)
Q Consensus 39 ~~~~~~~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~s-~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~ 117 (209)
++.+++-..+...|+..|+.|+||++|+++|++.... ...+|++++++++++++++++.+...++++... +.+++++.
T Consensus 24 ~~~~~~~~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~-~~~~r~~~ 102 (537)
T PLN02506 24 SSSPYQELNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNAL-SISYREQV 102 (537)
T ss_pred ccCchhhhhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHHH
Confidence 3444444666779999999999999999999986433 456899999999999999999999999988543 36789999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhcCCCC-cchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHH
Q 028434 118 AVKDCVENTRDSVDELQQSLQAMKDLKGP-EFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQL 196 (209)
Q Consensus 118 al~dC~ely~~a~d~L~~a~~~l~~~~~~-~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L 196 (209)
|++||.|+|++++++|.+++.+++....+ ......+|++|||||||||++||+|||++. ++.+++.|...+.++.+|
T Consensus 103 Al~DC~EllddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~--~~~~k~~v~~~l~nv~~L 180 (537)
T PLN02506 103 AIEDCKELLDFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGT--DRHLENFIKGSLKQVTQL 180 (537)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhc--chhHHHHHHHHHHHHHHH
Confidence 99999999999999999999998643221 111235899999999999999999999874 356788999999999999
Q ss_pred HHHHHHHHHhhc
Q 028434 197 ISNALALINQLN 208 (209)
Q Consensus 197 ~snaLaii~~l~ 208 (209)
+||+|||++++.
T Consensus 181 tSNALAiv~~l~ 192 (537)
T PLN02506 181 ISNVLAMYTQLH 192 (537)
T ss_pred HHHHHHHHhhcc
Confidence 999999998765
No 12
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2e-30 Score=239.48 Aligned_cols=156 Identities=28% Similarity=0.502 Sum_probs=136.5
Q ss_pred CcchhHHHHhccCCCCChhhHHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHH
Q 028434 45 NSSSTEFIKTSCRVTLYPDLCYNTLSSYAS--TIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDC 122 (209)
Q Consensus 45 ~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~--s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC 122 (209)
+.+..+.|+.+|+.|+||++|+++|++... +...+|++|++++|+++++++..+...+.++. +.+++.+.|++||
T Consensus 75 ~~~~~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~---~~~~r~k~Al~DC 151 (596)
T PLN02745 75 VSQVDKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK---FENPDEKDAIEDC 151 (596)
T ss_pred CchHHHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCHHHHHHHHHH
Confidence 456688999999999999999999998653 24568999999999999999999888887773 3678999999999
Q ss_pred HHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 028434 123 VENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALA 202 (209)
Q Consensus 123 ~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLa 202 (209)
.|+|++++|+|++++.++.. +.+.+.+.++|++|||||||||++||+|||++ +.++++|...+.++.+|+||+||
T Consensus 152 ~ELlddAid~L~~Sl~~l~~-~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e----~~l~s~m~~~l~~~~eLtSNALA 226 (596)
T PLN02745 152 KLLVEDAKEELKASISRIND-EVNKLAKNVPDLNNWLSAVMSYQETCIDGFPE----GKLKSEMEKTFKSSQELTSNSLA 226 (596)
T ss_pred HHHHHHHHHHHHHHHHHHhh-cccccccchHHHHHHHHHHhccHhHHHhhhcc----cchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999974 22234457899999999999999999999987 35789999999999999999999
Q ss_pred HHHhhc
Q 028434 203 LINQLN 208 (209)
Q Consensus 203 ii~~l~ 208 (209)
|++.+.
T Consensus 227 iv~~ls 232 (596)
T PLN02745 227 MVSSLT 232 (596)
T ss_pred HHhhhh
Confidence 998765
No 13
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.5e-30 Score=238.97 Aligned_cols=157 Identities=25% Similarity=0.379 Sum_probs=131.6
Q ss_pred CCCcchhHHHHhccCCCCChhhHHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHH
Q 028434 43 KSNSSSTEFIKTSCRVTLYPDLCYNTLSSYAS-TIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKD 121 (209)
Q Consensus 43 ~~~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~-s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~d 121 (209)
++...+...|+..|+.|+||++|+++|++.+. ....++.++++++|+++++++..+...++.+....+.+.....|++|
T Consensus 38 ~~~~~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~D 117 (553)
T PLN02708 38 PSSPSTPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATN 117 (553)
T ss_pred ccCCCccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHH
Confidence 34457788999999999999999999999885 34568999999999999999999999999887643223333589999
Q ss_pred HHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHH
Q 028434 122 CVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNAL 201 (209)
Q Consensus 122 C~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaL 201 (209)
|+|+|++++|+|++++.++.. . ..+|++||||||||||+||+|||.+.+..+.++..| ..+.++.+|+||+|
T Consensus 118 C~ELlddavd~L~~Sl~~L~~---~----~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSL 189 (553)
T PLN02708 118 CLEVLSNSEHRISSTDIALPR---G----KIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNAL 189 (553)
T ss_pred HHHHHHHHHHHHHHHHHHhhh---c----chHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHH
Confidence 999999999999999988863 1 359999999999999999999998642123456565 68899999999999
Q ss_pred HHHHhh
Q 028434 202 ALINQL 207 (209)
Q Consensus 202 aii~~l 207 (209)
||++++
T Consensus 190 Amv~~~ 195 (553)
T PLN02708 190 SMMASY 195 (553)
T ss_pred Hhhhcc
Confidence 999874
No 14
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.9e-30 Score=237.54 Aligned_cols=165 Identities=22% Similarity=0.383 Sum_probs=139.4
Q ss_pred CCCCCCCCcchhHHHHhccCCCCChhhHHHhhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHH
Q 028434 38 QQSPVKSNSSSTEFIKTSCRVTLYPDLCYNTLSSYASTI-QTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREA 116 (209)
Q Consensus 38 ~~~~~~~~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~-~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~ 116 (209)
.++.+-++.+..+.|+++|+.|+||++|+++|++.+... ..++.++++.+++.++..+..+...++.+....+.+++.+
T Consensus 27 ~~~~~~~~~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k 106 (541)
T PLN02416 27 NASYTTSLDPHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQR 106 (541)
T ss_pred ccccccCCchHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHH
Confidence 455566667778899999999999999999999987532 4577789999999999999888877776643333568899
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHH
Q 028434 117 SAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQL 196 (209)
Q Consensus 117 ~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L 196 (209)
.|++||.|+|++++|+|++++.+|+..+ . ++++|++|||||||||++||+|||++. ++.++++|...+.++.+|
T Consensus 107 ~AL~DC~El~~dAvD~L~~Sl~~L~~~~---~-~~~~DvqTWLSAALT~q~TC~DGF~~~--~~~~~~~i~~~~~~v~ql 180 (541)
T PLN02416 107 GTIQDCKELHQITVSSLKRSVSRIQAGD---S-RKLADARAYLSAALTNKNTCLEGLDSA--SGPLKPKLVNSFTSTYKH 180 (541)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc---c-cchhhHHHHHHHHhcchhhHHhhhhhc--CcchhhHHHHHHHHHHHH
Confidence 9999999999999999999999997532 2 367999999999999999999999874 356788999999999999
Q ss_pred HHHHHHHHHhhc
Q 028434 197 ISNALALINQLN 208 (209)
Q Consensus 197 ~snaLaii~~l~ 208 (209)
+||+|||++.+.
T Consensus 181 tSNALAlv~~~~ 192 (541)
T PLN02416 181 VSNSLSMLPKSR 192 (541)
T ss_pred HHHHHHHhcccc
Confidence 999999998754
No 15
>PLN02197 pectinesterase
Probab=99.97 E-value=2.3e-30 Score=238.34 Aligned_cols=154 Identities=18% Similarity=0.364 Sum_probs=132.3
Q ss_pred chhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCCHhHHHHHHHHHH
Q 028434 47 SSTEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLS--KGLELRPREASAVKDCVE 124 (209)
Q Consensus 47 ~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~--~~~~~~~~~~~al~dC~e 124 (209)
+..+.|+.+|+.|+||++|+++|++.+ ..+|+++++.++++++++++.+...++.+. ...+.+++++.|++||.|
T Consensus 36 ~~~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~e 112 (588)
T PLN02197 36 PQMKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKR 112 (588)
T ss_pred hhHHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHH
Confidence 345589999999999999999999987 358999999999999999999999888664 223458899999999999
Q ss_pred HHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 028434 125 NTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALI 204 (209)
Q Consensus 125 ly~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii 204 (209)
+|++++|+|++++.++.. +........+|++||||||||||+||+|||.+. .+++.|...+.++++|+||+|||+
T Consensus 113 Ll~davd~L~~Sl~~l~~-~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~----~~k~~v~~~l~nv~~LtSNaLAiv 187 (588)
T PLN02197 113 VFMYALEDLSTIVEEMGE-DLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED----DLRKTIGEGIANSKILTSNAIDIF 187 (588)
T ss_pred HHHHHHHHHHHHHHHHhh-cccccccchhhHHHHHHHHHhChhhhhccccCc----chHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999973 111223356999999999999999999999863 467888999999999999999999
Q ss_pred Hhhc
Q 028434 205 NQLN 208 (209)
Q Consensus 205 ~~l~ 208 (209)
+.+.
T Consensus 188 ~~ls 191 (588)
T PLN02197 188 HSVV 191 (588)
T ss_pred hccc
Confidence 8764
No 16
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1e-29 Score=232.56 Aligned_cols=154 Identities=24% Similarity=0.392 Sum_probs=134.5
Q ss_pred CcchhHHHHhccCCCCChhhHHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHH
Q 028434 45 NSSSTEFIKTSCRVTLYPDLCYNTLSSYAST--IQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDC 122 (209)
Q Consensus 45 ~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~s--~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC 122 (209)
+....+.|+..|+.|+||++|+++|++.+.. ...+|.+|++.+++++++++..+...++++.. .+.+++.+.|++||
T Consensus 46 ~~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-~~~~~~~~aAL~DC 124 (548)
T PLN02301 46 SSSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-RINDPRDKAALADC 124 (548)
T ss_pred CCCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCChHHHHHHHHH
Confidence 3455689999999999999999999998754 34589999999999999999999999998843 45788999999999
Q ss_pred HHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 028434 123 VENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALA 202 (209)
Q Consensus 123 ~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLa 202 (209)
.|+|++++|+|++++.+++.... ...+|++|||||||||++||+|||.+. .+++|...+.++.+|++|+||
T Consensus 125 ~ELl~davd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TC~DGF~~~-----~~~~~~~~l~n~~qL~SNsLA 195 (548)
T PLN02301 125 VELMDLSKDRIKDSVEALGNVTS----KSHADAHTWLSSVLTNHVTCLDGINGP-----SRQSMKPGLKDLISRARTSLA 195 (548)
T ss_pred HHHHHHHHHHHHHHHHHhhcccc----cchHHHHHHHHHHhcchhhHHhhhhhh-----hhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999875432 235899999999999999999999863 257889999999999999999
Q ss_pred HHHhhc
Q 028434 203 LINQLN 208 (209)
Q Consensus 203 ii~~l~ 208 (209)
|++.+.
T Consensus 196 iv~~l~ 201 (548)
T PLN02301 196 ILVSVS 201 (548)
T ss_pred hhcccc
Confidence 998764
No 17
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.96 E-value=3.5e-29 Score=194.38 Aligned_cols=148 Identities=43% Similarity=0.637 Sum_probs=127.4
Q ss_pred chhHHHHhccCCCCChh-hHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHH
Q 028434 47 SSTEFIKTSCRVTLYPD-LCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVEN 125 (209)
Q Consensus 47 ~~~~~I~~~C~~T~~p~-lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~el 125 (209)
+..+.|+++|++|+||. +|+.+|.+++.....|+++|++++|++++.++..+..+++++.+..+.++..+.+|++|.++
T Consensus 2 s~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~ 81 (152)
T PF04043_consen 2 STSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQEL 81 (152)
T ss_dssp --HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHH
T ss_pred chHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHH
Confidence 46789999999999777 99999999977788899999999999999999999999999987645789999999999999
Q ss_pred HHhHHHHHHHHHHHH--hcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHH
Q 028434 126 TRDSVDELQQSLQAM--KDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALAL 203 (209)
Q Consensus 126 y~~a~d~L~~a~~~l--~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLai 203 (209)
|++++++|++++.++ .. ++ ++++++|||+|+++++||+|||.+. .+.++++|...+.++.+|++|+|+|
T Consensus 82 y~~a~~~l~~a~~~l~~~~---~~----~~~~~~~lsaa~~~~~tC~~~f~~~--~~~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 82 YDDAVDSLQRALEALNSKN---GD----YDDARTWLSAALTNQDTCEDGFEEA--GSPVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHHHHHHHHHHH--HH---T-----HHHHHHHHHHHHHHHHHHHHHC-TT--SSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccc---ch----hHHHHHHHHHHHHHHHHHHHHhccc--CCCccchHHHHHHHHHHHHHHHhhC
Confidence 999999999999999 44 33 4899999999999999999999521 2457899999999999999999997
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=3.1e-29 Score=227.78 Aligned_cols=157 Identities=26% Similarity=0.398 Sum_probs=136.4
Q ss_pred CCcchhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--CHhHHHHHHH
Q 028434 44 SNSSSTEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLEL--RPREASAVKD 121 (209)
Q Consensus 44 ~~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~--~~~~~~al~d 121 (209)
-+.+....|+..|+.|+||++|+++|++.+. +|+++++.++++++.+++.+...++++....+. +++.+.+++|
T Consensus 17 ~~~~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~D 92 (497)
T PLN02698 17 MPFAYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDS 92 (497)
T ss_pred CchhHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHH
Confidence 3467889999999999999999999999773 899999999999999999999999988654333 4788899999
Q ss_pred HHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCC--CCchhhhhHHHHHHHHHHHHHH
Q 028434 122 CVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNG--VNGKVKDTIRGRIVRASQLISN 199 (209)
Q Consensus 122 C~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~--~~~~~~s~l~~~~~~~~~L~sn 199 (209)
|.|+|++++++|++++.+|..... +.++|++|||||||||++||+|||.+.. .++.+++.|.+.+.++.+|+||
T Consensus 93 C~Ell~dsvd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSN 168 (497)
T PLN02698 93 CERLMKMSLKRLRQSLLALKGSSR----KNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSN 168 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccc----cchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876321 3569999999999999999999995421 1346889999999999999999
Q ss_pred HHHHHHhhc
Q 028434 200 ALALINQLN 208 (209)
Q Consensus 200 aLaii~~l~ 208 (209)
+|||++.+.
T Consensus 169 ALAmv~~l~ 177 (497)
T PLN02698 169 SLALVNRIT 177 (497)
T ss_pred HHHHHhhhh
Confidence 999999875
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.96 E-value=1.3e-28 Score=225.63 Aligned_cols=150 Identities=23% Similarity=0.366 Sum_probs=129.6
Q ss_pred HhccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCHhHHHHHHHHHHHHHh
Q 028434 53 KTSCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSK----GLELRPREASAVKDCVENTRD 128 (209)
Q Consensus 53 ~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~----~~~~~~~~~~al~dC~ely~~ 128 (209)
...|+.|+||++|+++|++.+... .+|.++++.+|+++++++..+...++++.. ..+.+++++.|++||+|++++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~~-~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELldd 81 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSSP-SDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSEL 81 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHH
Confidence 467999999999999999877543 589999999999999999999999998863 224678899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHh
Q 028434 129 SVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQ 206 (209)
Q Consensus 129 a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~ 206 (209)
++|+|++++.+|...+. ......+|++||||||||||+||+|||.+. ++.+++.|...+.++.+|+||+|||++.
T Consensus 82 SvD~L~~Sl~~L~~~~~-~~~~~~~DvqTWLSAALTnqdTClDGF~~~--~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 82 NVDYLETISSELKSAEL-MTDALVERVTSLLSGVVTNQQTCYDGLVDS--KSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHHhcccc-ccccchhhHHHhHHHhhcChhhhhchhhcc--chhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999975421 113356899999999999999999999864 3567888999999999999999999985
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=5e-23 Score=187.56 Aligned_cols=127 Identities=25% Similarity=0.447 Sum_probs=110.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCHhHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhh
Q 028434 77 QTNPTELANAALSVSLNEAKSTSALVLKLSKGL--ELRPREASAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKIND 154 (209)
Q Consensus 77 ~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~--~~~~~~~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d 154 (209)
..+|.+|++.+|+++++++..+...++++.... +.+++++.|++||.|+|++++++|++++.++.... ..++|
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~~-----~~~~D 122 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSSS-----PEFND 122 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----cchhH
Confidence 468999999999999999999999999886532 46889999999999999999999999999987521 13599
Q ss_pred HHHHHHHhhcChhhHhhhcCCCC------CCchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 028434 155 LQTWVSAALTNEDTCMDNFEGNG------VNGKVKDTIRGRIVRASQLISNALALINQLN 208 (209)
Q Consensus 155 ~~twLSAAlt~~~TC~Dgf~~~~------~~~~~~s~l~~~~~~~~~L~snaLaii~~l~ 208 (209)
++|||||||||++||+|||++.+ .++.+++.|...+.++.+|+||+|||++++.
T Consensus 123 v~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls 182 (530)
T PLN02933 123 VSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNIS 182 (530)
T ss_pred HHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999998643 1235788899999999999999999998764
No 21
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=7.3e-23 Score=186.47 Aligned_cols=125 Identities=26% Similarity=0.460 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCc--chhhhhhHHH
Q 028434 80 PTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENTRDSVDELQQSLQAMKDLKGPE--FEFKINDLQT 157 (209)
Q Consensus 80 ~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~--~~~~~~d~~t 157 (209)
+..++++++++++++++.+...++++.+. ..+++++.|++||+|++++++|+|++++.+|+..++.. .....+|++|
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~~-~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~DvqT 115 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDKV-FGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLRT 115 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHH
Confidence 44778889999999999999999988653 35789999999999999999999999999997543211 1235699999
Q ss_pred HHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 028434 158 WVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQL 207 (209)
Q Consensus 158 wLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~l 207 (209)
||||||||++||+|||++. ++.+++.+...+.++.+|+||+|||++..
T Consensus 116 WLSAALTnq~TClDGF~~~--~~~~k~~v~~~l~nvt~LtSNaLALv~~~ 163 (520)
T PLN02201 116 WLSAALSNQDTCIEGFDGT--NGIVKKLVAGSLSQVGSTVRELLTMVHPP 163 (520)
T ss_pred HHHhhhcchhhhhhhhhcc--ccchhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999874 35677888899999999999999999763
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.4e-22 Score=182.80 Aligned_cols=150 Identities=21% Similarity=0.215 Sum_probs=125.9
Q ss_pred hccCCCCChhhHHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHH----HHH
Q 028434 54 TSCRVTLYPDLCYNTLSSYA----STIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDC----VEN 125 (209)
Q Consensus 54 ~~C~~T~~p~lC~~tL~~~~----~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC----~el 125 (209)
..|++++||+.|...++... .....++.++++++++.++.++..+...+..+......+++++.|++|| +|+
T Consensus 3 ~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~el 82 (509)
T PLN02488 3 GVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFEEM 82 (509)
T ss_pred eecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHHHH
Confidence 57999999999999987766 3334468999999999999999999999998876542388999999999 999
Q ss_pred HHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 028434 126 TRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALIN 205 (209)
Q Consensus 126 y~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~ 205 (209)
+++++|+|.+++..+...+... ....+|++||||||||||+||+|||.+ +.++..|...+.++++|+||+|||++
T Consensus 83 ~~~~~~~l~~s~~~~~~~~~~~-~~~~~d~~twLSa~lt~q~TC~dg~~~----~~~~~~~~~~l~~~~~~~sn~La~~~ 157 (509)
T PLN02488 83 MESAKDRMIRSVEELLGGESPN-LGSYENVHTWLSGVLTSYITCIDEIGE----GAYKRRVEPELEDLISRARVALAIFI 157 (509)
T ss_pred HHHHHHHHHHHHHHhhcccccc-cCcHHHHHHHHHHhHhchhhHhccccC----cchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999996321111 123589999999999999999999953 35778888999999999999999998
Q ss_pred hhc
Q 028434 206 QLN 208 (209)
Q Consensus 206 ~l~ 208 (209)
.+.
T Consensus 158 ~~~ 160 (509)
T PLN02488 158 SIS 160 (509)
T ss_pred ccc
Confidence 653
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.88 E-value=5.9e-22 Score=180.12 Aligned_cols=173 Identities=21% Similarity=0.277 Sum_probs=116.8
Q ss_pred cCCchhHHHHHHHHHHHHHHhhhcccccccC-CCCCCCCcchhHHHHhccCCCCChhhHHHhhhccCCCCCCCHHHHHHH
Q 028434 8 KFPSCYSLAIIITLLYFCTTTTCLPTRLLVQ-QSPVKSNSSSTEFIKTSCRVTLYPDLCYNTLSSYASTIQTNPTELANA 86 (209)
Q Consensus 8 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~I~~~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ 86 (209)
+||-.+-|++++-|+.++....+-..+--|+ +++-+++. +.+++. +||+.|+.+|++... .-|+.+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~s~~~~---~~~~~~~~~ 81 (529)
T PLN02170 12 KFPITLMFLLILNFLYLSAVVFASNSNSHFSKFSRHPNSD---SSSRSS----PSSSSKQGFLSSVQE---SMNHALFAR 81 (529)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhccCCCCCchhccCCCcc---ccccCC----CCcchhhhhhhhhhc---cChHHHHHh
Confidence 4555555555555555555554433332222 11112222 222332 999999999998743 337777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcCh
Q 028434 87 ALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNE 166 (209)
Q Consensus 87 ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~ 166 (209)
+++..+..... ..+ ....+|++||+|++++++|+|++++..... .+..+|++||||||||||
T Consensus 82 ~~~~~~~~~~~---------~~~---~~~~~Al~DC~ELlddavd~L~~S~~~~~~------~~~~~DvqTWLSAALTnq 143 (529)
T PLN02170 82 SLAFNLTLSHR---------TVQ---THTFDPVNDCLELLDDTLDMLSRIVVIKHA------DHDEEDVHTWLSAALTNQ 143 (529)
T ss_pred hhHhhhhhhhh---------hcc---cchhHHHHHHHHHHHHHHHHHHHHHHhhcc------ccchhHHHHHHHHHHhch
Confidence 77765441111 111 112679999999999999999999955332 235799999999999999
Q ss_pred hhHhhhcCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 028434 167 DTCMDNFEGNGVNGKVKDTIRGRIVRASQLISNALALINQLN 208 (209)
Q Consensus 167 ~TC~Dgf~~~~~~~~~~s~l~~~~~~~~~L~snaLaii~~l~ 208 (209)
+||+|||++.+....++..+...+.++.+|+||+|||++.+.
T Consensus 144 ~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~ 185 (529)
T PLN02170 144 ETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVK 185 (529)
T ss_pred hhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999999987543345666777788999999999999998764
No 24
>PLN02916 pectinesterase family protein
Probab=99.69 E-value=1.7e-16 Score=144.06 Aligned_cols=86 Identities=26% Similarity=0.419 Sum_probs=70.4
Q ss_pred CCCHhHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCCCCCCchhhhhHHHH
Q 028434 110 ELRPREASAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEGNGVNGKVKDTIRGR 189 (209)
Q Consensus 110 ~~~~~~~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~s~l~~~ 189 (209)
|.+-....|++||+|+|++++|+|.+++..+... ..+|++||||||||||+||+|||++.+ ... ...
T Consensus 56 ~~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~~-------~~~DvqTWLSAALTnq~TClDGf~~~~---~~~---~~~ 122 (502)
T PLN02916 56 GSYYNLGEALSDCEKLYDESEARLSKLLVSHENF-------TVEDARTWLSGVLANHHTCLDGLEQKG---QGH---KPM 122 (502)
T ss_pred CCcccHhHHHHHHHHHHHHHHHHHHHHHHhhccC-------chHHHHHHHHHHHhCHhHHHHhhhhcc---ccc---hHH
Confidence 3445578899999999999999999999876431 259999999999999999999998642 112 234
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 028434 190 IVRASQLISNALALINQLN 208 (209)
Q Consensus 190 ~~~~~~L~snaLaii~~l~ 208 (209)
+.++.+|+||+|||++++.
T Consensus 123 v~nvt~ltSNaLAlv~~~~ 141 (502)
T PLN02916 123 AHNVTFVLSEALALYKKSR 141 (502)
T ss_pred HHHHHHHHHHHHHHhhhhh
Confidence 6799999999999998764
No 25
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=69.29 E-value=39 Score=24.12 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHh-----hcCC--CCCHhHHHHHHHHHHHHHhHHHHHHHHHH
Q 028434 88 LSVSLNEAKSTSALVLKL-----SKGL--ELRPREASAVKDCVENTRDSVDELQQSLQ 138 (209)
Q Consensus 88 i~~a~~~a~~~~~~i~~l-----~~~~--~~~~~~~~al~dC~ely~~a~d~L~~a~~ 138 (209)
.+++..+|......++.- +..+ +.+..++.|++-|.+-|.++-.-+.++..
T Consensus 28 qqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawniVSrty~ 85 (97)
T KOG1733|consen 28 QQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWNIVSRTYI 85 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346667777766666532 2223 35788999999999999999988877754
No 26
>PF06404 PSK: Phytosulfokine precursor protein (PSK); InterPro: IPR009438 This family consists of several plant specific phytosulfokine precursor proteins. Phytosulfokines, are active as either a pentapeptide or a C-terminally truncated tetrapeptide. These compounds were first isolated because of their ability to stimulate cell division in somatic embryo cultures of Asparagus officinalis [].; GO: 0008083 growth factor activity, 0008283 cell proliferation, 0005576 extracellular region
Probab=63.89 E-value=7 Score=27.25 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=24.0
Q ss_pred HHhhhcccccccCCCCCCCCc---chhH-----------HHHhccCCCCChhhHHH
Q 028434 26 TTTTCLPTRLLVQQSPVKSNS---SSTE-----------FIKTSCRVTLYPDLCYN 67 (209)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~---~~~~-----------~I~~~C~~T~~p~lC~~ 67 (209)
.++...++|++|...+..... .... .....|.....-+-|+.
T Consensus 8 ~~~~~~AARp~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~E~Ceg~~~eEECL~ 63 (81)
T PF06404_consen 8 SSTSAAAARPLPASQGAEPVKSEEVQSAGVDEDEVVSELMGEESCEGGEGEEECLM 63 (81)
T ss_pred HhhHhhhcCCCCCccccccccccchhhcchhhhhhHHHhhhhccccCCCCchHHHH
Confidence 445567889998877654332 1111 12337887666666754
No 27
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=56.47 E-value=47 Score=20.77 Aligned_cols=45 Identities=9% Similarity=0.136 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHHhHHHHHH
Q 028434 89 SVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENTRDSVDELQ 134 (209)
Q Consensus 89 ~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely~~a~d~L~ 134 (209)
+.++..++.+.+.+..+.-. ..|+.-+..+..|.+..+..+++|+
T Consensus 3 kq~lAslK~~qA~Le~fal~-T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 3 KQTLASLKKAQADLETFALQ-TQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHHHhhHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 34455556666666666433 2578888889999888888887775
No 28
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=51.35 E-value=91 Score=25.26 Aligned_cols=58 Identities=28% Similarity=0.344 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHHHHhHHHHHHHHHHH
Q 028434 77 QTNPTELANAALSVSLNEAKSTSALVLKLSKGLEL-RPREASAVKDCVENTRDSVDELQQSLQA 139 (209)
Q Consensus 77 ~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~-~~~~~~al~dC~ely~~a~d~L~~a~~~ 139 (209)
..||.-|..+-. .++...+.+..++..-|+ -.....---+|++.|.++++.|.+++++
T Consensus 121 ~vDp~VL~DlE~-----~~~el~~~vD~llr~lgg~lh~is~lt~~~vq~yr~aV~kl~d~~Da 179 (222)
T KOG4514|consen 121 EVDPSVLSDLEL-----EAQELASSVDNLLRNLGGLLHSISSLTADNVQVYRNAVNKLTDTLDA 179 (222)
T ss_pred CCChHHHHHHHH-----HHHHHHHHHHHHHHHhhhHHHHHHHhhhhHHHHHHHHHHHHHHHhhh
Confidence 357765544322 345555556666553222 2334556679999999999999988875
No 29
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=47.41 E-value=56 Score=21.21 Aligned_cols=29 Identities=24% Similarity=0.487 Sum_probs=23.2
Q ss_pred CCCHhHHHHHHHHHHHHHhHHHHHHHHHH
Q 028434 110 ELRPREASAVKDCVENTRDSVDELQQSLQ 138 (209)
Q Consensus 110 ~~~~~~~~al~dC~ely~~a~d~L~~a~~ 138 (209)
..+..+..|++.|.+-|-++-..+.+...
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999988877654
No 30
>PF10907 DUF2749: Protein of unknown function (DUF2749); InterPro: IPR024475 This bacterial family of proteins represent the TrbJ and TrbK genes of the Ti plasmid conjugative transfer operon [].
Probab=44.56 E-value=19 Score=23.94 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHHHhhhcccccccCCCCCCCCc
Q 028434 13 YSLAIIITLLYFCTTTTCLPTRLLVQQSPVKSNS 46 (209)
Q Consensus 13 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (209)
||..+|+.|++........++-+++++.+...|.
T Consensus 1 ms~~viIaL~~avaa~a~~atwviVq~~~a~~p~ 34 (66)
T PF10907_consen 1 MSRRVIIALVVAVAAAAGAATWVIVQPRPAGNPA 34 (66)
T ss_pred CCcchhHHHHHHHHhhhceeEEEEECCCCCCCCC
Confidence 4556666666665555555666778887544443
No 31
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=42.99 E-value=1.6e+02 Score=24.21 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=52.8
Q ss_pred ccCCCCChhhHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-HhHHHHHHHHHHHHHhHHHHH
Q 028434 55 SCRVTLYPDLCYNTLSSYASTIQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELR-PREASAVKDCVENTRDSVDEL 133 (209)
Q Consensus 55 ~C~~T~~p~lC~~tL~~~~~s~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~-~~~~~al~dC~ely~~a~d~L 133 (209)
-|+ +.|+..|.. +.-+.+..-.|-.+=++-+.+-+.++...++..++.+..-.|++ ......+++=.|.-..+.+++
T Consensus 6 gCq-saYY~amEk-vG~hKRdilvdrVe~Ardsq~eaqeQF~sALe~f~sl~~~~ggdLe~~Y~~ln~~ye~s~~~A~~V 83 (201)
T PF11172_consen 6 GCQ-SAYYSAMEK-VGVHKRDILVDRVEDARDSQQEAQEQFKSALEQFKSLVNFDGGDLEDKYNALNDEYESSEDAAEEV 83 (201)
T ss_pred HhH-HHHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 476 568888877 55555444456667788889999999999999999988765554 233344444444444444444
Q ss_pred HHHHHH
Q 028434 134 QQSLQA 139 (209)
Q Consensus 134 ~~a~~~ 139 (209)
.+-+.+
T Consensus 84 ~~RI~~ 89 (201)
T PF11172_consen 84 SDRIDA 89 (201)
T ss_pred HHHHHH
Confidence 443333
No 32
>PF14290 DUF4370: Domain of unknown function (DUF4370)
Probab=39.37 E-value=2.2e+02 Score=23.51 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhHHHHHHHhhcChhhHhhhcCC
Q 028434 116 ASAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKINDLQTWVSAALTNEDTCMDNFEG 175 (209)
Q Consensus 116 ~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~ 175 (209)
..|-+.|.|.++. +..|.-.++++-...+.+....-+..+.-|.++-.-..+=+|.|..
T Consensus 130 fRAAeAvEeFgG~-L~tLrm~idDl~GlsGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp 188 (239)
T PF14290_consen 130 FRAAEAVEEFGGI-LVTLRMEIDDLCGLSGENVKPLPDYIENALRTAYKRYMTYLDSFGP 188 (239)
T ss_pred HHHHHHHHHhhhh-HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3455668777776 7888888888876655444434456666677777777888999975
No 33
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=28.39 E-value=46 Score=23.52 Aligned_cols=27 Identities=11% Similarity=0.304 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhcC
Q 028434 117 SAVKDCVENTRDSVDELQQSLQAMKDL 143 (209)
Q Consensus 117 ~al~dC~ely~~a~d~L~~a~~~l~~~ 143 (209)
.-..||.|-+-+-+.++++|.++++.+
T Consensus 65 ATfnDc~eA~veL~~~IkEAr~~L~rk 91 (95)
T KOG4841|consen 65 ATFNDCEEAAVELQSQIKEARADLARK 91 (95)
T ss_pred eccCCcHHHHHHHHHHHHHHHHHHHHc
Confidence 357899999999999999999999863
No 34
>PF15339 Afaf: Acrosome formation-associated factor
Probab=24.91 E-value=69 Score=25.68 Aligned_cols=20 Identities=35% Similarity=0.619 Sum_probs=14.9
Q ss_pred chhHHHHHHHHHHHHHHhhh
Q 028434 11 SCYSLAIIITLLYFCTTTTC 30 (209)
Q Consensus 11 ~~~s~~~~~~~~~~~~~~~~ 30 (209)
+.|.|+++++||.||.++.-
T Consensus 137 sLmTl~lfv~Ll~~c~atly 156 (200)
T PF15339_consen 137 SLMTLFLFVILLAFCSATLY 156 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 46788888888888776554
No 35
>PF09125 COX2-transmemb: Cytochrome C oxidase subunit II, transmembrane; InterPro: IPR015209 This N-terminal domain forms the transmembrane region in subunit II of cytochrome c oxidase from Thermus thermophilus. This domain adopts a tertiary structure consisting of two antiparallel transmembrane helices, in a transmembrane helix hairpin fold []. ; PDB: 1EHK_B 2QPE_B 3S8F_B 4EV3_B 3BVD_B 3S8G_B 3EH3_B 3S3C_B 3S39_B 3QJQ_B ....
Probab=23.22 E-value=1.3e+02 Score=17.69 Aligned_cols=15 Identities=20% Similarity=0.552 Sum_probs=11.3
Q ss_pred hhHHHHHHHHHHHHH
Q 028434 12 CYSLAIIITLLYFCT 26 (209)
Q Consensus 12 ~~s~~~~~~~~~~~~ 26 (209)
+|+++.++||+.+..
T Consensus 18 ~F~l~mi~vFi~li~ 32 (38)
T PF09125_consen 18 AFALAMILVFIALIG 32 (38)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 688888888887743
No 36
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=22.74 E-value=60 Score=23.06 Aligned_cols=26 Identities=15% Similarity=0.438 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhcC
Q 028434 118 AVKDCVENTRDSVDELQQSLQAMKDL 143 (209)
Q Consensus 118 al~dC~ely~~a~d~L~~a~~~l~~~ 143 (209)
-.+||.|-|.+-..++++|-++++.+
T Consensus 62 tFnDcpeA~~eL~~eI~eAK~dLr~k 87 (91)
T PF08285_consen 62 TFNDCPEAAKELQKEIKEAKADLRKK 87 (91)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 57789999999999999999999863
No 37
>COG4383 Mu-like prophage protein gp29 [Function unknown]
Probab=20.48 E-value=2.3e+02 Score=25.89 Aligned_cols=68 Identities=18% Similarity=0.233 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCcchhhhhhH
Q 028434 76 IQTNPTELANAALSVSLNEAKSTSALVLKLSKGLELRPREASAVKDCVENTRDSVDELQQSLQAMKDLKGPEFEFKINDL 155 (209)
Q Consensus 76 ~~~d~~~l~~~ai~~a~~~a~~~~~~i~~l~~~~~~~~~~~~al~dC~ely~~a~d~L~~a~~~l~~~~~~~~~~~~~d~ 155 (209)
....|++++..++..+ -+....+.+.-++ ....+|++.| .|+++...|......|+. ..+
T Consensus 437 ~~~e~~d~ld~~~d~a--~a~~~~~~idPll------r~vv~Al~~~--~yeea~~~L~~lY~~ldd----------a~l 496 (517)
T COG4383 437 RQGEPQDILDGALDDA--VAPDLQSQIDPLL------RPVVAALNAG--SYEEAQAALNALYPELDD----------AEL 496 (517)
T ss_pred cCCChHHHhhhccccc--cchhhHhhhhHHH------HHHHHHHHhc--CHHHHHHHHHHhhhccCh----------HHH
Confidence 3456777776666543 1112222222222 1245788999 899999998877777754 688
Q ss_pred HHHHHHhh
Q 028434 156 QTWVSAAL 163 (209)
Q Consensus 156 ~twLSAAl 163 (209)
+|.|+-||
T Consensus 497 ~T~l~~ai 504 (517)
T COG4383 497 RTLLQRAI 504 (517)
T ss_pred HHHHHHHH
Confidence 88888775
Done!