Query 028437
Match_columns 209
No_of_seqs 176 out of 1586
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 11:31:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028437.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028437hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01337 MDH_glyoxysomal_mitoch 100.0 8.6E-40 1.9E-44 280.1 19.0 181 29-209 1-184 (310)
2 TIGR01772 MDH_euk_gproteo mala 100.0 1E-38 2.2E-43 273.8 18.3 180 30-209 1-183 (312)
3 PRK05442 malate dehydrogenase; 100.0 6.2E-38 1.3E-42 270.5 17.5 175 25-206 1-188 (326)
4 COG0039 Mdh Malate/lactate deh 100.0 1.4E-37 3E-42 264.5 18.0 173 29-208 1-180 (313)
5 TIGR01759 MalateDH-SF1 malate 100.0 1.8E-37 3.8E-42 267.4 18.6 174 26-206 1-187 (323)
6 PLN00106 malate dehydrogenase 100.0 9.3E-37 2E-41 262.6 21.5 181 28-208 18-201 (323)
7 cd05290 LDH_3 A subgroup of L- 100.0 1.8E-36 3.9E-41 259.7 19.0 171 30-208 1-181 (307)
8 cd05293 LDH_1 A subgroup of L- 100.0 4.2E-36 9E-41 258.1 19.1 177 27-209 2-183 (312)
9 PLN02602 lactate dehydrogenase 100.0 1E-35 2.2E-40 258.7 19.3 173 29-208 38-216 (350)
10 KOG1495 Lactate dehydrogenase 100.0 2.2E-35 4.7E-40 242.4 17.3 173 28-209 20-200 (332)
11 cd00704 MDH Malate dehydrogena 100.0 1.3E-35 2.9E-40 256.0 16.2 170 30-206 2-184 (323)
12 PLN00112 malate dehydrogenase 100.0 2.8E-35 6.1E-40 261.5 18.6 176 24-206 96-284 (444)
13 cd01338 MDH_choloroplast_like 100.0 6.4E-35 1.4E-39 251.6 18.1 172 28-206 2-186 (322)
14 PRK00066 ldh L-lactate dehydro 100.0 9.7E-35 2.1E-39 250.1 18.8 175 26-208 4-184 (315)
15 PTZ00325 malate dehydrogenase; 100.0 2E-34 4.4E-39 248.0 20.4 179 27-209 7-192 (321)
16 TIGR01757 Malate-DH_plant mala 100.0 1.1E-34 2.3E-39 254.3 18.7 177 23-206 39-228 (387)
17 KOG1494 NAD-dependent malate d 100.0 7.7E-35 1.7E-39 240.2 16.5 192 15-206 15-207 (345)
18 TIGR01771 L-LDH-NAD L-lactate 100.0 1.2E-34 2.6E-39 247.7 16.7 168 33-208 1-175 (299)
19 cd05291 HicDH_like L-2-hydroxy 100.0 1.1E-33 2.3E-38 242.9 17.9 171 29-208 1-179 (306)
20 PRK05086 malate dehydrogenase; 100.0 2.1E-33 4.6E-38 241.4 19.5 179 29-208 1-184 (312)
21 TIGR01758 MDH_euk_cyt malate d 100.0 1.7E-33 3.7E-38 243.0 17.8 172 30-206 1-183 (324)
22 cd01336 MDH_cytoplasmic_cytoso 100.0 1.8E-33 3.8E-38 243.1 17.5 172 27-206 1-186 (325)
23 cd00300 LDH_like L-lactate deh 100.0 2.8E-33 6E-38 239.7 17.6 171 31-208 1-177 (300)
24 cd05295 MDH_like Malate dehydr 100.0 1.4E-33 3E-38 250.7 16.2 177 23-206 118-308 (452)
25 PTZ00117 malate dehydrogenase; 100.0 1.2E-32 2.7E-37 237.5 20.4 174 27-208 4-184 (319)
26 cd00650 LDH_MDH_like NAD-depen 100.0 1.4E-32 3E-37 231.2 19.1 171 31-207 1-176 (263)
27 PTZ00082 L-lactate dehydrogena 100.0 2.6E-32 5.7E-37 235.5 19.6 177 25-209 3-191 (321)
28 TIGR01763 MalateDH_bact malate 100.0 1.7E-32 3.6E-37 235.3 18.1 174 29-209 2-181 (305)
29 PRK06223 malate dehydrogenase; 100.0 4.1E-32 8.8E-37 233.0 18.1 173 28-208 2-181 (307)
30 cd05294 LDH-like_MDH_nadp A la 100.0 5.1E-32 1.1E-36 232.7 18.3 175 29-209 1-184 (309)
31 cd05292 LDH_2 A subgroup of L- 100.0 1.2E-31 2.7E-36 230.3 18.3 173 29-209 1-179 (308)
32 cd01339 LDH-like_MDH L-lactate 100.0 1.2E-30 2.6E-35 223.4 18.0 170 31-208 1-177 (300)
33 PF00056 Ldh_1_N: lactate/mala 100.0 1.5E-30 3.3E-35 199.8 13.0 139 29-172 1-141 (141)
34 KOG1496 Malate dehydrogenase [ 100.0 2E-30 4.3E-35 210.4 11.7 179 25-207 1-189 (332)
35 TIGR01756 LDH_protist lactate 100.0 3.5E-28 7.6E-33 208.8 14.6 144 56-206 17-168 (313)
36 PLN00135 malate dehydrogenase 100.0 9E-28 2E-32 205.8 14.8 143 56-205 15-165 (309)
37 PRK15076 alpha-galactosidase; 99.9 1.3E-22 2.9E-27 181.3 15.3 165 28-206 1-200 (431)
38 cd05296 GH4_P_beta_glucosidase 99.9 2E-21 4.4E-26 173.0 15.3 166 29-205 1-196 (419)
39 cd05197 GH4_glycoside_hydrolas 99.9 5.9E-21 1.3E-25 170.3 16.5 168 29-206 1-197 (425)
40 cd05297 GH4_alpha_glucosidase_ 99.8 1.4E-19 2.9E-24 161.8 16.3 166 29-206 1-198 (423)
41 cd05298 GH4_GlvA_pagL_like Gly 99.8 3.6E-19 7.7E-24 159.2 16.8 168 29-206 1-197 (437)
42 PF02056 Glyco_hydro_4: Family 99.8 6.1E-19 1.3E-23 140.2 14.7 151 30-191 1-183 (183)
43 COG1486 CelF Alpha-galactosida 99.8 1.6E-17 3.4E-22 146.7 14.7 168 27-205 2-200 (442)
44 PF01073 3Beta_HSD: 3-beta hyd 99.2 7.7E-11 1.7E-15 100.2 10.5 115 32-147 1-117 (280)
45 KOG1502 Flavonol reductase/cin 99.2 2.2E-10 4.7E-15 98.4 11.9 118 27-147 5-129 (327)
46 PLN02166 dTDP-glucose 4,6-dehy 99.2 7.2E-10 1.6E-14 99.7 13.7 114 25-146 117-234 (436)
47 PLN02427 UDP-apiose/xylose syn 99.1 7.8E-10 1.7E-14 97.5 11.2 116 25-146 11-136 (386)
48 CHL00194 ycf39 Ycf39; Provisio 99.1 8.7E-10 1.9E-14 94.8 10.8 109 29-146 1-110 (317)
49 PRK15181 Vi polysaccharide bio 99.1 1.9E-09 4E-14 94.0 12.9 116 27-145 14-140 (348)
50 PLN02206 UDP-glucuronate decar 99.1 2.3E-09 4.9E-14 96.7 13.4 121 18-146 109-233 (442)
51 COG1250 FadB 3-hydroxyacyl-CoA 99.1 2.3E-09 5E-14 91.8 12.6 149 28-201 3-189 (307)
52 COG1004 Ugd Predicted UDP-gluc 99.1 3E-09 6.6E-14 93.0 13.4 113 29-153 1-129 (414)
53 PF02737 3HCDH_N: 3-hydroxyacy 99.1 5.9E-10 1.3E-14 88.9 7.7 117 30-174 1-136 (180)
54 PLN02662 cinnamyl-alcohol dehy 99.0 3.7E-09 8E-14 90.4 12.6 116 28-145 4-126 (322)
55 PLN02650 dihydroflavonol-4-red 99.0 4.3E-09 9.2E-14 91.6 12.2 117 28-146 5-128 (351)
56 PLN00198 anthocyanidin reducta 99.0 8.6E-09 1.9E-13 89.1 13.4 117 28-146 9-131 (338)
57 PRK08125 bifunctional UDP-gluc 99.0 4E-09 8.6E-14 99.5 11.9 113 25-146 312-432 (660)
58 PRK11908 NAD-dependent epimera 99.0 3.6E-09 7.7E-14 91.9 10.6 110 28-146 1-118 (347)
59 PRK07066 3-hydroxybutyryl-CoA 99.0 8.4E-09 1.8E-13 89.3 12.2 120 28-173 7-140 (321)
60 COG0451 WcaG Nucleoside-diphos 99.0 5.9E-09 1.3E-13 88.4 10.8 110 29-145 1-115 (314)
61 PLN02214 cinnamoyl-CoA reducta 99.0 7.6E-09 1.6E-13 90.0 11.4 111 28-146 10-127 (342)
62 PRK07819 3-hydroxybutyryl-CoA 98.9 4E-09 8.8E-14 89.9 9.4 123 27-173 4-142 (286)
63 PF03721 UDPG_MGDP_dh_N: UDP-g 98.9 1.1E-08 2.3E-13 82.1 10.8 122 29-164 1-140 (185)
64 TIGR03589 PseB UDP-N-acetylglu 98.9 1.4E-08 3.1E-13 87.6 11.7 116 28-145 4-124 (324)
65 TIGR01181 dTDP_gluc_dehyt dTDP 98.9 3.6E-08 7.7E-13 83.6 13.3 116 30-146 1-125 (317)
66 PLN02572 UDP-sulfoquinovose sy 98.9 1.7E-08 3.6E-13 91.0 11.7 116 27-145 46-190 (442)
67 TIGR01472 gmd GDP-mannose 4,6- 98.9 1.8E-08 3.9E-13 87.3 11.2 115 29-145 1-131 (343)
68 PLN02986 cinnamyl-alcohol dehy 98.9 3.6E-08 7.8E-13 84.6 12.8 117 28-146 5-128 (322)
69 TIGR03466 HpnA hopanoid-associ 98.9 2.3E-08 4.9E-13 85.4 11.3 113 29-146 1-113 (328)
70 PRK09987 dTDP-4-dehydrorhamnos 98.9 1.1E-08 2.4E-13 87.3 9.3 99 29-145 1-103 (299)
71 COG1087 GalE UDP-glucose 4-epi 98.9 1.9E-08 4E-13 85.3 10.2 105 29-139 1-112 (329)
72 PRK10217 dTDP-glucose 4,6-dehy 98.9 5.5E-08 1.2E-12 84.5 13.4 107 28-135 1-115 (355)
73 KOG2304 3-hydroxyacyl-CoA dehy 98.9 2.5E-09 5.3E-14 87.1 4.4 128 24-174 7-154 (298)
74 PLN02583 cinnamoyl-CoA reducta 98.9 3.6E-08 7.9E-13 84.1 11.9 114 29-146 7-128 (297)
75 PLN02695 GDP-D-mannose-3',5'-e 98.8 2.6E-08 5.7E-13 87.7 11.1 117 25-146 18-137 (370)
76 PLN02989 cinnamyl-alcohol dehy 98.8 9.1E-08 2E-12 82.2 13.9 117 28-146 5-129 (325)
77 PLN02896 cinnamyl-alcohol dehy 98.8 3.9E-08 8.5E-13 85.7 11.6 117 25-146 7-138 (353)
78 TIGR02622 CDP_4_6_dhtase CDP-g 98.8 9.7E-08 2.1E-12 83.1 13.6 116 29-146 5-127 (349)
79 PLN03209 translocon at the inn 98.8 5.3E-08 1.1E-12 89.7 12.1 117 27-146 79-208 (576)
80 PF02719 Polysacc_synt_2: Poly 98.8 1.8E-08 3.8E-13 85.8 8.0 119 31-150 1-137 (293)
81 PLN02778 3,5-epimerase/4-reduc 98.8 5.8E-08 1.3E-12 83.1 11.1 88 28-137 9-103 (298)
82 PRK08293 3-hydroxybutyryl-CoA 98.8 5.4E-08 1.2E-12 82.9 10.6 120 28-173 3-141 (287)
83 TIGR02437 FadB fatty oxidation 98.8 3.2E-08 6.9E-13 94.1 9.9 124 27-174 312-450 (714)
84 PRK10084 dTDP-glucose 4,6 dehy 98.8 5.2E-08 1.1E-12 84.6 10.4 106 29-135 1-114 (352)
85 PRK11730 fadB multifunctional 98.8 3.5E-08 7.5E-13 93.9 9.8 120 27-173 312-449 (715)
86 PRK10675 UDP-galactose-4-epime 98.8 1.1E-07 2.3E-12 82.0 12.0 115 29-146 1-124 (338)
87 PLN02653 GDP-mannose 4,6-dehyd 98.7 5.7E-08 1.2E-12 84.1 9.8 116 28-145 6-138 (340)
88 PLN02657 3,8-divinyl protochlo 98.7 1.3E-07 2.8E-12 84.0 12.2 120 21-146 53-182 (390)
89 TIGR01777 yfcH conserved hypot 98.7 4.5E-08 9.8E-13 82.2 8.7 98 31-137 1-102 (292)
90 PRK11150 rfaD ADP-L-glycero-D- 98.7 8.8E-08 1.9E-12 81.6 10.4 109 31-146 2-116 (308)
91 COG1086 Predicted nucleoside-d 98.7 8.2E-08 1.8E-12 87.4 10.6 125 25-150 247-385 (588)
92 PLN02260 probable rhamnose bio 98.7 2.3E-07 5E-12 87.6 13.9 119 28-146 6-132 (668)
93 PF13460 NAD_binding_10: NADH( 98.7 7.4E-08 1.6E-12 75.8 9.0 95 31-147 1-99 (183)
94 COG0240 GpsA Glycerol-3-phosph 98.7 3.6E-07 7.8E-12 78.7 13.7 69 28-104 1-79 (329)
95 TIGR02441 fa_ox_alpha_mit fatt 98.7 3.8E-08 8.2E-13 93.8 8.5 120 27-173 334-471 (737)
96 TIGR01214 rmlD dTDP-4-dehydror 98.7 8.5E-08 1.8E-12 80.7 9.6 95 30-145 1-99 (287)
97 KOG1430 C-3 sterol dehydrogena 98.7 9.5E-08 2.1E-12 83.5 9.9 119 26-147 2-127 (361)
98 PRK07530 3-hydroxybutyryl-CoA 98.7 1E-07 2.2E-12 81.3 9.4 101 27-150 3-122 (292)
99 TIGR02440 FadJ fatty oxidation 98.7 8.6E-08 1.9E-12 91.0 9.7 120 27-173 303-441 (699)
100 PRK11154 fadJ multifunctional 98.7 9.4E-08 2E-12 90.9 9.8 120 27-174 308-447 (708)
101 PLN02353 probable UDP-glucose 98.7 4.2E-07 9.1E-12 82.6 13.6 121 28-152 1-135 (473)
102 PRK08268 3-hydroxy-acyl-CoA de 98.7 8.8E-08 1.9E-12 87.8 9.2 121 27-174 6-144 (507)
103 COG2910 Putative NADH-flavin r 98.7 9E-08 2E-12 75.9 7.9 123 29-168 1-126 (211)
104 PF01370 Epimerase: NAD depend 98.7 4.1E-08 9E-13 79.8 6.2 112 31-146 1-116 (236)
105 PLN02686 cinnamoyl-CoA reducta 98.7 1.4E-07 3E-12 83.1 9.9 118 27-146 52-180 (367)
106 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.7 1.1E-07 2.3E-12 87.1 9.4 121 27-174 4-142 (503)
107 KOG1429 dTDP-glucose 4-6-dehyd 98.7 6.4E-08 1.4E-12 81.4 7.2 115 25-145 24-140 (350)
108 PRK06194 hypothetical protein; 98.7 3.8E-07 8.3E-12 76.8 11.7 115 29-147 7-149 (287)
109 PRK05808 3-hydroxybutyryl-CoA 98.6 1.6E-07 3.5E-12 79.7 9.4 102 28-151 3-122 (282)
110 PRK07201 short chain dehydroge 98.6 4E-07 8.8E-12 85.3 12.9 112 29-145 1-124 (657)
111 TIGR02197 heptose_epim ADP-L-g 98.6 2.2E-07 4.8E-12 78.9 10.1 110 31-146 1-114 (314)
112 PF01210 NAD_Gly3P_dh_N: NAD-d 98.6 1.3E-07 2.9E-12 73.6 7.9 117 30-170 1-127 (157)
113 PLN02240 UDP-glucose 4-epimera 98.6 5.3E-07 1.1E-11 78.1 12.0 115 28-146 5-132 (352)
114 PRK12320 hypothetical protein; 98.6 3.6E-07 7.7E-12 86.3 10.9 101 29-146 1-102 (699)
115 PRK06035 3-hydroxyacyl-CoA deh 98.6 2.5E-07 5.5E-12 78.9 9.1 117 29-173 4-142 (291)
116 PRK05865 hypothetical protein; 98.6 4.3E-07 9.3E-12 87.5 11.4 104 29-148 1-105 (854)
117 PLN02545 3-hydroxybutyryl-CoA 98.6 3.1E-07 6.7E-12 78.4 9.3 106 25-150 1-122 (295)
118 PRK06129 3-hydroxyacyl-CoA deh 98.6 4.7E-07 1E-11 77.9 10.4 102 28-150 2-121 (308)
119 PRK09260 3-hydroxybutyryl-CoA 98.6 3E-07 6.5E-12 78.3 9.0 101 29-150 2-120 (288)
120 PRK07531 bifunctional 3-hydrox 98.6 7.8E-07 1.7E-11 81.4 11.9 104 27-151 3-120 (495)
121 TIGR01915 npdG NADPH-dependent 98.5 1.9E-06 4.2E-11 70.5 12.4 100 29-150 1-106 (219)
122 COG1090 Predicted nucleoside-d 98.5 1.1E-06 2.3E-11 73.9 10.8 96 31-137 1-101 (297)
123 PRK06130 3-hydroxybutyryl-CoA 98.5 1.3E-06 2.9E-11 75.0 11.4 104 26-150 2-118 (311)
124 PRK12829 short chain dehydroge 98.5 2.7E-06 5.8E-11 70.4 12.8 124 19-145 3-146 (264)
125 PRK13394 3-hydroxybutyrate deh 98.5 8.2E-07 1.8E-11 73.4 9.0 114 29-146 8-144 (262)
126 PRK06180 short chain dehydroge 98.5 2.6E-06 5.5E-11 71.7 11.7 114 28-146 4-137 (277)
127 COG1088 RfbB dTDP-D-glucose 4, 98.5 1.8E-06 3.9E-11 73.2 10.5 117 29-145 1-125 (340)
128 PLN02996 fatty acyl-CoA reduct 98.5 3.7E-06 8E-11 76.9 13.4 116 29-145 12-160 (491)
129 PRK08267 short chain dehydroge 98.5 1.5E-06 3.2E-11 72.2 9.9 117 29-147 2-137 (260)
130 PRK06482 short chain dehydroge 98.4 5.4E-06 1.2E-10 69.4 13.3 113 29-146 3-135 (276)
131 PLN00141 Tic62-NAD(P)-related 98.4 1.5E-06 3.3E-11 72.1 9.8 112 27-145 16-131 (251)
132 PF04321 RmlD_sub_bind: RmlD s 98.4 2E-07 4.4E-12 79.3 4.5 96 29-145 1-100 (286)
133 TIGR03026 NDP-sugDHase nucleot 98.4 6.1E-06 1.3E-10 73.8 13.5 118 29-160 1-136 (411)
134 PRK07806 short chain dehydroge 98.4 2.2E-06 4.8E-11 70.4 9.5 114 29-146 7-135 (248)
135 PLN02253 xanthoxin dehydrogena 98.4 1.4E-05 3E-10 67.1 14.5 114 28-146 18-155 (280)
136 PRK06179 short chain dehydroge 98.4 3.5E-06 7.6E-11 70.3 10.5 113 27-147 3-133 (270)
137 PRK05993 short chain dehydroge 98.4 3.2E-06 7E-11 71.1 10.3 114 28-146 4-135 (277)
138 PRK06182 short chain dehydroge 98.4 4.3E-06 9.4E-11 70.0 10.9 114 28-146 3-133 (273)
139 TIGR01179 galE UDP-glucose-4-e 98.4 2.9E-06 6.2E-11 72.1 9.8 110 30-145 1-120 (328)
140 PLN02260 probable rhamnose bio 98.4 2.8E-06 6.1E-11 80.3 10.3 94 27-144 379-479 (668)
141 PLN02725 GDP-4-keto-6-deoxyman 98.3 1.5E-06 3.2E-11 73.6 7.5 95 32-145 1-100 (306)
142 PRK05653 fabG 3-ketoacyl-(acyl 98.3 3.8E-06 8.2E-11 68.4 9.4 115 28-146 5-141 (246)
143 COG1091 RfbD dTDP-4-dehydrorha 98.3 3.2E-06 6.9E-11 71.7 9.1 95 29-145 1-99 (281)
144 COG0300 DltE Short-chain dehyd 98.3 6.1E-06 1.3E-10 69.5 10.7 121 26-149 4-146 (265)
145 PRK12828 short chain dehydroge 98.3 5.4E-06 1.2E-10 67.3 10.1 117 28-146 7-141 (239)
146 PRK07067 sorbitol dehydrogenas 98.3 1.6E-05 3.5E-10 65.7 13.2 114 29-146 7-140 (257)
147 PF05368 NmrA: NmrA-like famil 98.3 1.6E-06 3.4E-11 71.1 7.0 94 31-136 1-94 (233)
148 PRK07102 short chain dehydroge 98.3 2.1E-05 4.6E-10 64.5 13.8 117 28-147 1-136 (243)
149 PRK07326 short chain dehydroge 98.3 4.6E-06 1E-10 68.0 9.7 114 29-147 7-141 (237)
150 TIGR01746 Thioester-redct thio 98.3 8.4E-06 1.8E-10 70.2 11.8 114 30-145 1-135 (367)
151 PF03446 NAD_binding_2: NAD bi 98.3 2.2E-06 4.8E-11 67.0 7.4 65 28-104 1-65 (163)
152 PRK12937 short chain dehydroge 98.3 2E-05 4.4E-10 64.4 13.4 116 27-146 4-140 (245)
153 PLN02503 fatty acyl-CoA reduct 98.3 8.2E-06 1.8E-10 76.2 12.1 118 27-145 118-267 (605)
154 KOG1371 UDP-glucose 4-epimeras 98.3 2.7E-06 5.9E-11 72.9 8.2 113 28-145 2-127 (343)
155 PRK10538 malonic semialdehyde 98.3 1.6E-05 3.5E-10 65.6 12.7 115 29-147 1-135 (248)
156 PRK12746 short chain dehydroge 98.3 3E-05 6.4E-10 63.9 14.2 114 29-146 7-147 (254)
157 PRK07666 fabG 3-ketoacyl-(acyl 98.3 2.2E-05 4.7E-10 64.2 13.3 116 29-148 8-145 (239)
158 PRK07774 short chain dehydroge 98.3 1.7E-05 3.6E-10 65.2 12.6 116 29-146 7-145 (250)
159 PRK07523 gluconate 5-dehydroge 98.3 7.3E-06 1.6E-10 67.8 10.5 115 29-147 11-147 (255)
160 PRK08219 short chain dehydroge 98.3 5.6E-06 1.2E-10 66.9 9.5 112 28-146 3-129 (227)
161 PRK08278 short chain dehydroge 98.3 4.6E-05 1E-09 64.0 15.4 115 29-147 7-150 (273)
162 PRK00094 gpsA NAD(P)H-dependen 98.3 1E-05 2.2E-10 69.5 11.6 98 28-149 1-109 (325)
163 PRK12367 short chain dehydroge 98.3 1.6E-05 3.4E-10 66.2 12.3 103 28-134 14-120 (245)
164 PRK12826 3-ketoacyl-(acyl-carr 98.3 9.1E-06 2E-10 66.5 10.8 115 28-146 6-142 (251)
165 PRK07856 short chain dehydroge 98.3 2.3E-05 5.1E-10 64.7 13.3 114 28-147 6-136 (252)
166 PRK07231 fabG 3-ketoacyl-(acyl 98.3 5.6E-06 1.2E-10 67.9 9.3 114 28-146 5-141 (251)
167 PRK12429 3-hydroxybutyrate deh 98.3 5E-06 1.1E-10 68.4 9.0 114 28-146 4-140 (258)
168 PRK05717 oxidoreductase; Valid 98.3 1.1E-05 2.4E-10 66.8 10.9 113 29-146 11-144 (255)
169 COG2085 Predicted dinucleotide 98.3 9.9E-06 2.1E-10 65.7 10.2 93 28-148 1-96 (211)
170 PRK11064 wecC UDP-N-acetyl-D-m 98.3 9.7E-06 2.1E-10 72.7 11.3 109 28-151 3-126 (415)
171 PRK15057 UDP-glucose 6-dehydro 98.3 1.4E-05 3.1E-10 71.0 12.0 111 29-151 1-124 (388)
172 PRK07069 short chain dehydroge 98.2 3E-05 6.5E-10 63.6 13.1 115 30-147 1-139 (251)
173 PRK08643 acetoin reductase; Va 98.2 0.00014 3E-09 60.1 17.1 115 29-147 3-140 (256)
174 PRK14618 NAD(P)H-dependent gly 98.2 1.5E-05 3.3E-10 69.0 11.5 71 26-104 2-82 (328)
175 PRK12827 short chain dehydroge 98.2 5.1E-05 1.1E-09 62.0 14.1 116 28-147 6-148 (249)
176 PRK12939 short chain dehydroge 98.2 1.9E-05 4.2E-10 64.6 11.5 114 29-146 8-143 (250)
177 PRK06924 short chain dehydroge 98.2 1.1E-05 2.3E-10 66.5 10.0 34 29-64 2-35 (251)
178 TIGR03206 benzo_BadH 2-hydroxy 98.2 2E-05 4.3E-10 64.7 11.5 115 28-146 3-139 (250)
179 PRK06172 short chain dehydroge 98.2 3.8E-05 8.3E-10 63.3 13.3 113 29-146 8-144 (253)
180 PF03807 F420_oxidored: NADP o 98.2 7.3E-06 1.6E-10 58.0 7.5 94 30-147 1-96 (96)
181 TIGR03649 ergot_EASG ergot alk 98.2 8.8E-06 1.9E-10 68.6 9.3 97 30-145 1-104 (285)
182 PRK12936 3-ketoacyl-(acyl-carr 98.2 3.8E-05 8.2E-10 62.7 12.8 115 28-147 6-140 (245)
183 PRK08642 fabG 3-ketoacyl-(acyl 98.2 3.8E-05 8.3E-10 63.1 12.9 117 27-147 4-147 (253)
184 PRK08213 gluconate 5-dehydroge 98.2 2.6E-05 5.7E-10 64.6 11.9 114 29-146 13-149 (259)
185 PRK08340 glucose-1-dehydrogena 98.2 3.3E-05 7.1E-10 64.1 12.3 117 29-147 1-139 (259)
186 PTZ00345 glycerol-3-phosphate 98.2 1.2E-05 2.7E-10 70.8 10.2 78 21-104 4-101 (365)
187 PLN00016 RNA-binding protein; 98.2 1.1E-05 2.4E-10 71.0 9.9 98 27-145 51-164 (378)
188 PRK05693 short chain dehydroge 98.2 1.3E-05 2.9E-10 67.0 10.0 114 29-147 2-131 (274)
189 TIGR01963 PHB_DH 3-hydroxybuty 98.2 3.3E-05 7.1E-10 63.5 12.1 113 29-146 2-137 (255)
190 PRK09135 pteridine reductase; 98.2 4.8E-06 1E-10 68.1 7.0 104 29-135 7-130 (249)
191 PRK05557 fabG 3-ketoacyl-(acyl 98.2 2.5E-05 5.4E-10 63.6 11.3 116 27-146 4-142 (248)
192 PRK07825 short chain dehydroge 98.2 6.9E-05 1.5E-09 62.6 14.2 114 29-148 6-139 (273)
193 PRK12745 3-ketoacyl-(acyl-carr 98.2 8.3E-05 1.8E-09 61.2 14.5 102 29-134 3-126 (256)
194 TIGR01832 kduD 2-deoxy-D-gluco 98.2 3.2E-05 7E-10 63.5 11.9 115 28-146 5-140 (248)
195 PRK12439 NAD(P)H-dependent gly 98.2 4.8E-05 1E-09 66.4 13.5 111 26-161 5-128 (341)
196 PRK06841 short chain dehydroge 98.2 1.4E-05 3.1E-10 65.9 9.7 116 28-146 15-148 (255)
197 PRK06398 aldose dehydrogenase; 98.2 2.5E-05 5.4E-10 65.0 11.2 109 29-146 7-131 (258)
198 PRK05875 short chain dehydroge 98.2 1.5E-05 3.3E-10 66.6 9.9 117 28-146 7-146 (276)
199 PRK07453 protochlorophyllide o 98.2 2.1E-05 4.6E-10 67.6 11.0 115 28-146 6-145 (322)
200 PRK06101 short chain dehydroge 98.2 1.8E-05 3.8E-10 65.1 10.0 114 29-146 2-128 (240)
201 PRK15182 Vi polysaccharide bio 98.2 5.5E-05 1.2E-09 68.1 13.9 121 27-160 5-136 (425)
202 COG1748 LYS9 Saccharopine dehy 98.2 6.6E-05 1.4E-09 66.5 14.0 146 28-201 1-153 (389)
203 PRK08265 short chain dehydroge 98.2 6.9E-05 1.5E-09 62.4 13.6 114 29-146 7-137 (261)
204 PRK14619 NAD(P)H-dependent gly 98.2 2.2E-05 4.7E-10 67.5 10.8 79 27-146 3-83 (308)
205 PRK07814 short chain dehydroge 98.2 3E-05 6.5E-10 64.6 11.3 115 28-146 10-147 (263)
206 PRK07890 short chain dehydroge 98.2 1.2E-05 2.6E-10 66.4 8.8 114 29-146 6-141 (258)
207 PRK06181 short chain dehydroge 98.2 3.1E-05 6.7E-10 64.2 11.3 115 29-147 2-138 (263)
208 PRK06914 short chain dehydroge 98.2 0.00013 2.7E-09 61.2 15.1 115 29-146 4-140 (280)
209 PRK12481 2-deoxy-D-gluconate 3 98.1 6.9E-05 1.5E-09 62.1 13.1 115 29-147 9-144 (251)
210 PRK05866 short chain dehydroge 98.1 4.1E-05 8.8E-10 65.2 11.9 115 29-146 41-178 (293)
211 PRK05884 short chain dehydroge 98.1 1.6E-05 3.4E-10 64.9 9.0 113 29-146 1-131 (223)
212 PRK07024 short chain dehydroge 98.1 1.3E-05 2.8E-10 66.5 8.6 113 28-146 2-138 (257)
213 PRK08945 putative oxoacyl-(acy 98.1 6.7E-05 1.5E-09 61.7 12.6 120 25-146 9-152 (247)
214 PRK09291 short chain dehydroge 98.1 7.2E-05 1.6E-09 61.6 12.8 115 29-146 3-132 (257)
215 PRK08264 short chain dehydroge 98.1 2.9E-05 6.2E-10 63.4 10.3 115 28-147 6-134 (238)
216 PF07993 NAD_binding_4: Male s 98.1 9.3E-06 2E-10 67.5 7.5 112 33-146 1-135 (249)
217 PRK07023 short chain dehydroge 98.1 8.3E-06 1.8E-10 66.9 7.1 35 28-64 1-35 (243)
218 PRK06196 oxidoreductase; Provi 98.1 4.2E-05 9E-10 65.6 11.7 112 29-146 27-156 (315)
219 PRK08263 short chain dehydroge 98.1 1.8E-05 3.9E-10 66.4 9.2 114 29-146 4-136 (275)
220 PRK06522 2-dehydropantoate 2-r 98.1 0.0001 2.2E-09 62.7 13.9 100 29-150 1-105 (304)
221 PRK12825 fabG 3-ketoacyl-(acyl 98.1 2.7E-05 5.8E-10 63.4 9.9 115 28-146 6-143 (249)
222 PRK07074 short chain dehydroge 98.1 4.1E-05 9E-10 63.2 11.2 116 29-146 3-136 (257)
223 PRK12742 oxidoreductase; Provi 98.1 0.00012 2.6E-09 59.6 13.8 115 29-146 7-132 (237)
224 TIGR03376 glycerol3P_DH glycer 98.1 3.6E-05 7.7E-10 67.4 11.2 69 30-104 1-90 (342)
225 PRK12921 2-dehydropantoate 2-r 98.1 7.6E-05 1.6E-09 63.6 13.0 99 29-149 1-106 (305)
226 PRK06138 short chain dehydroge 98.1 2.7E-05 5.9E-10 63.9 9.9 113 28-146 5-140 (252)
227 PRK08229 2-dehydropantoate 2-r 98.1 5.6E-05 1.2E-09 65.6 12.3 99 28-149 2-111 (341)
228 PRK08220 2,3-dihydroxybenzoate 98.1 7.5E-05 1.6E-09 61.3 12.5 110 29-146 9-135 (252)
229 PRK09186 flagellin modificatio 98.1 2.6E-05 5.6E-10 64.3 9.7 35 28-64 4-38 (256)
230 PRK12384 sorbitol-6-phosphate 98.1 0.0001 2.2E-09 61.0 13.2 117 29-147 3-142 (259)
231 TIGR01830 3oxo_ACP_reduc 3-oxo 98.1 6.6E-05 1.4E-09 60.9 11.8 115 31-147 1-136 (239)
232 PRK06953 short chain dehydroge 98.1 3.4E-05 7.3E-10 62.6 10.0 114 29-146 2-130 (222)
233 PRK07577 short chain dehydroge 98.1 1.7E-05 3.6E-10 64.5 8.3 108 29-146 4-127 (234)
234 PRK14620 NAD(P)H-dependent gly 98.1 4.5E-05 9.7E-10 66.0 11.2 97 29-149 1-110 (326)
235 PRK06197 short chain dehydroge 98.1 3.1E-05 6.7E-10 66.1 10.0 115 29-146 17-152 (306)
236 PRK07454 short chain dehydroge 98.1 4.9E-05 1.1E-09 62.2 10.7 115 28-147 6-143 (241)
237 PRK12935 acetoacetyl-CoA reduc 98.1 5.5E-05 1.2E-09 62.0 10.9 115 29-147 7-144 (247)
238 PRK05854 short chain dehydroge 98.1 3.8E-05 8.2E-10 66.0 10.3 115 29-147 15-151 (313)
239 PRK09134 short chain dehydroge 98.1 3.1E-05 6.8E-10 64.1 9.5 115 27-145 8-145 (258)
240 PRK07424 bifunctional sterol d 98.1 5.9E-05 1.3E-09 67.5 11.7 103 28-133 178-285 (406)
241 PRK07832 short chain dehydroge 98.1 0.00058 1.3E-08 57.1 17.2 118 29-148 1-140 (272)
242 PRK06057 short chain dehydroge 98.0 5.1E-05 1.1E-09 62.7 10.5 34 29-64 8-41 (255)
243 PRK08085 gluconate 5-dehydroge 98.0 4.7E-05 1E-09 62.9 10.2 117 28-146 9-145 (254)
244 PRK06463 fabG 3-ketoacyl-(acyl 98.0 9E-05 1.9E-09 61.3 11.9 115 28-146 7-138 (255)
245 PRK06249 2-dehydropantoate 2-r 98.0 0.00012 2.6E-09 63.1 13.0 103 27-149 4-110 (313)
246 PRK08251 short chain dehydroge 98.0 0.00026 5.7E-09 58.0 14.6 116 29-146 3-140 (248)
247 PRK07109 short chain dehydroge 98.0 0.00022 4.9E-09 61.9 14.6 115 29-146 9-144 (334)
248 PRK06935 2-deoxy-D-gluconate 3 98.0 4.9E-05 1.1E-09 63.0 10.1 115 29-147 16-151 (258)
249 PRK12747 short chain dehydroge 98.0 0.00029 6.3E-09 58.0 14.7 118 28-147 4-146 (252)
250 PRK06124 gluconate 5-dehydroge 98.0 4.6E-05 9.9E-10 62.9 9.8 119 28-148 11-149 (256)
251 PRK07576 short chain dehydroge 98.0 3.9E-05 8.5E-10 64.0 9.5 117 29-147 10-145 (264)
252 PRK05876 short chain dehydroge 98.0 6.5E-05 1.4E-09 63.3 10.8 114 29-146 7-143 (275)
253 PRK06500 short chain dehydroge 98.0 6.3E-05 1.4E-09 61.6 10.5 110 29-145 7-136 (249)
254 COG0677 WecC UDP-N-acetyl-D-ma 98.0 0.00013 2.9E-09 64.2 12.8 133 29-174 10-160 (436)
255 PRK05650 short chain dehydroge 98.0 7E-05 1.5E-09 62.5 10.9 116 29-147 1-137 (270)
256 PRK06171 sorbitol-6-phosphate 98.0 8.5E-05 1.8E-09 61.8 11.2 113 29-148 10-147 (266)
257 PRK05565 fabG 3-ketoacyl-(acyl 98.0 0.00011 2.3E-09 60.0 11.6 114 29-146 6-142 (247)
258 TIGR03325 BphB_TodD cis-2,3-di 98.0 3.2E-05 7E-10 64.3 8.6 35 28-64 5-39 (262)
259 PRK07063 short chain dehydroge 98.0 4.6E-05 9.9E-10 63.2 9.4 116 29-146 8-145 (260)
260 PRK12823 benD 1,6-dihydroxycyc 98.0 0.00015 3.2E-09 60.0 12.4 115 29-146 9-144 (260)
261 PRK07060 short chain dehydroge 98.0 2.3E-05 5.1E-10 64.0 7.4 113 29-146 10-137 (245)
262 PRK06128 oxidoreductase; Provi 98.0 9.2E-05 2E-09 63.1 11.3 114 29-146 56-192 (300)
263 PRK12744 short chain dehydroge 98.0 0.00031 6.6E-09 58.2 14.0 112 29-144 9-144 (257)
264 PRK08589 short chain dehydroge 98.0 0.00021 4.5E-09 59.9 13.2 115 29-147 7-142 (272)
265 PF10727 Rossmann-like: Rossma 98.0 4.6E-05 9.9E-10 57.4 8.0 97 28-150 10-109 (127)
266 PLN02780 ketoreductase/ oxidor 98.0 8.5E-05 1.8E-09 64.2 10.8 116 29-146 54-193 (320)
267 PF01118 Semialdhyde_dh: Semia 98.0 3.3E-05 7.1E-10 57.4 7.2 72 30-104 1-74 (121)
268 PRK08993 2-deoxy-D-gluconate 3 98.0 0.00015 3.2E-09 60.1 11.8 114 29-146 11-145 (253)
269 PRK06701 short chain dehydroge 98.0 0.00012 2.6E-09 62.2 11.5 114 29-146 47-182 (290)
270 PRK07904 short chain dehydroge 98.0 0.00014 3.1E-09 60.4 11.7 118 25-146 5-146 (253)
271 PRK06550 fabG 3-ketoacyl-(acyl 98.0 0.00015 3.2E-09 59.0 11.6 107 29-146 6-127 (235)
272 COG4221 Short-chain alcohol de 98.0 0.00015 3.3E-09 60.0 11.5 118 29-149 7-143 (246)
273 PRK08063 enoyl-(acyl carrier p 98.0 0.00019 4.2E-09 58.8 12.3 114 29-146 5-141 (250)
274 PRK07097 gluconate 5-dehydroge 98.0 0.00025 5.3E-09 59.1 13.0 116 29-148 11-148 (265)
275 TIGR02415 23BDH acetoin reduct 97.9 0.00021 4.5E-09 58.8 12.4 113 30-146 2-137 (254)
276 PRK07578 short chain dehydroge 97.9 0.00011 2.4E-09 58.6 10.3 102 29-146 1-112 (199)
277 PRK07478 short chain dehydroge 97.9 0.00023 5.1E-09 58.7 12.3 113 29-146 7-143 (254)
278 PRK08226 short chain dehydroge 97.9 8.2E-05 1.8E-09 61.7 9.5 113 29-145 7-140 (263)
279 PRK09072 short chain dehydroge 97.9 0.00016 3.6E-09 60.0 11.4 114 28-146 5-139 (263)
280 PRK11199 tyrA bifunctional cho 97.9 0.00018 3.8E-09 63.8 12.1 60 21-104 91-150 (374)
281 PRK08339 short chain dehydroge 97.9 0.00023 5.1E-09 59.4 12.3 115 29-147 9-145 (263)
282 PRK08655 prephenate dehydrogen 97.9 0.00021 4.5E-09 64.6 12.7 66 29-104 1-66 (437)
283 PRK06139 short chain dehydroge 97.9 0.00016 3.6E-09 62.8 11.4 115 29-146 8-143 (330)
284 COG0702 Predicted nucleoside-d 97.9 0.00013 2.7E-09 60.6 10.3 74 29-107 1-74 (275)
285 TIGR00872 gnd_rel 6-phosphoglu 97.9 0.00016 3.4E-09 62.0 11.1 95 29-148 1-96 (298)
286 PRK07985 oxidoreductase; Provi 97.9 0.00058 1.3E-08 58.1 14.5 115 29-147 50-187 (294)
287 PRK12824 acetoacetyl-CoA reduc 97.9 7.6E-05 1.6E-09 60.9 8.5 114 29-147 3-140 (245)
288 PRK08628 short chain dehydroge 97.9 0.00032 6.8E-09 58.0 12.3 114 29-146 8-140 (258)
289 PRK06523 short chain dehydroge 97.9 4.2E-05 9.2E-10 63.3 7.0 111 29-146 10-138 (260)
290 PRK08703 short chain dehydroge 97.9 0.0016 3.4E-08 53.2 16.2 116 29-146 7-147 (239)
291 PRK06077 fabG 3-ketoacyl-(acyl 97.9 0.00014 3E-09 59.7 9.8 116 29-146 7-141 (252)
292 PRK08177 short chain dehydroge 97.9 8.4E-05 1.8E-09 60.4 8.5 34 29-64 2-35 (225)
293 PRK05867 short chain dehydroge 97.9 0.00029 6.3E-09 58.1 11.9 113 29-145 10-145 (253)
294 PRK14982 acyl-ACP reductase; P 97.9 0.00013 2.8E-09 63.7 10.0 70 29-108 156-227 (340)
295 PRK06949 short chain dehydroge 97.9 0.00014 2.9E-09 60.0 9.7 34 29-64 10-43 (258)
296 PRK09009 C factor cell-cell si 97.9 0.00024 5.1E-09 57.9 11.0 75 29-108 1-79 (235)
297 COG0569 TrkA K+ transport syst 97.9 0.00012 2.5E-09 60.4 9.2 71 29-105 1-75 (225)
298 PRK07035 short chain dehydroge 97.8 0.00015 3.2E-09 59.7 9.9 116 29-146 9-145 (252)
299 PRK06928 pyrroline-5-carboxyla 97.8 0.00047 1E-08 58.5 13.0 99 28-149 1-102 (277)
300 PRK07677 short chain dehydroge 97.8 0.00019 4.2E-09 59.2 10.4 114 29-146 2-138 (252)
301 PRK05872 short chain dehydroge 97.8 0.00013 2.9E-09 62.0 9.7 113 29-146 10-143 (296)
302 PRK06483 dihydromonapterin red 97.8 0.00014 3E-09 59.4 9.3 34 29-64 3-36 (236)
303 PRK09242 tropinone reductase; 97.8 0.00035 7.6E-09 57.7 11.8 116 29-146 10-147 (257)
304 PRK07634 pyrroline-5-carboxyla 97.8 0.0003 6.4E-09 58.2 11.3 70 27-104 3-74 (245)
305 PRK08017 oxidoreductase; Provi 97.8 0.00014 3E-09 59.9 9.2 113 29-146 3-133 (256)
306 PRK12743 oxidoreductase; Provi 97.8 0.0008 1.7E-08 55.7 13.7 114 29-146 3-140 (256)
307 PRK05855 short chain dehydroge 97.8 0.00015 3.2E-09 66.6 10.1 117 28-146 315-452 (582)
308 PRK06200 2,3-dihydroxy-2,3-dih 97.8 0.00013 2.9E-09 60.5 9.0 35 28-64 6-40 (263)
309 PRK08936 glucose-1-dehydrogena 97.8 0.001 2.2E-08 55.1 14.2 114 29-146 8-145 (261)
310 PRK06114 short chain dehydroge 97.8 0.00028 6.1E-09 58.3 10.8 116 29-146 9-145 (254)
311 PRK06113 7-alpha-hydroxysteroi 97.8 0.0006 1.3E-08 56.3 12.7 117 28-146 11-146 (255)
312 PRK06198 short chain dehydroge 97.8 0.00073 1.6E-08 55.8 13.2 114 29-146 7-144 (260)
313 PLN02688 pyrroline-5-carboxyla 97.8 0.00027 5.8E-09 59.3 10.7 66 29-104 1-69 (266)
314 PRK07417 arogenate dehydrogena 97.8 0.00022 4.8E-09 60.5 10.2 65 29-104 1-65 (279)
315 PRK06947 glucose-1-dehydrogena 97.8 0.00027 5.9E-09 57.9 10.5 114 29-146 3-143 (248)
316 PRK08277 D-mannonate oxidoredu 97.8 0.00036 7.9E-09 58.4 11.4 34 29-64 11-44 (278)
317 PRK11880 pyrroline-5-carboxyla 97.8 0.00024 5.3E-09 59.5 10.3 96 28-149 2-98 (267)
318 PRK11559 garR tartronate semia 97.8 0.00021 4.5E-09 60.9 9.9 65 28-104 2-66 (296)
319 PRK06123 short chain dehydroge 97.8 0.00044 9.6E-09 56.6 11.5 116 30-147 4-144 (248)
320 PRK06484 short chain dehydroge 97.8 0.00047 1E-08 63.0 12.7 117 28-148 269-403 (520)
321 PRK08217 fabG 3-ketoacyl-(acyl 97.8 0.00027 5.9E-09 57.8 9.9 34 29-64 6-39 (253)
322 TIGR01505 tartro_sem_red 2-hyd 97.7 0.0002 4.3E-09 61.0 9.3 64 30-105 1-64 (291)
323 PRK07775 short chain dehydroge 97.7 0.0006 1.3E-08 57.2 12.1 114 29-146 11-146 (274)
324 PRK08261 fabG 3-ketoacyl-(acyl 97.7 0.00035 7.6E-09 62.9 11.1 116 28-146 210-343 (450)
325 COG2084 MmsB 3-hydroxyisobutyr 97.7 0.00031 6.6E-09 59.9 10.0 66 29-105 1-66 (286)
326 PRK12938 acetyacetyl-CoA reduc 97.7 0.00049 1.1E-08 56.3 11.0 116 29-146 4-140 (246)
327 PRK05786 fabG 3-ketoacyl-(acyl 97.7 0.00023 5E-09 57.9 9.0 34 29-64 6-39 (238)
328 PRK07680 late competence prote 97.7 0.00032 7E-09 59.2 10.1 97 29-149 1-100 (273)
329 PRK08324 short chain dehydroge 97.7 0.00045 9.7E-09 65.7 12.1 113 29-146 423-558 (681)
330 TIGR01831 fabG_rel 3-oxoacyl-( 97.7 0.00064 1.4E-08 55.4 11.5 114 31-148 1-138 (239)
331 PRK06545 prephenate dehydrogen 97.7 0.00034 7.4E-09 61.5 10.3 68 29-104 1-68 (359)
332 PRK03659 glutathione-regulated 97.7 0.00031 6.7E-09 65.9 10.5 140 28-196 400-541 (601)
333 PRK07792 fabG 3-ketoacyl-(acyl 97.7 0.00066 1.4E-08 58.1 11.7 101 28-132 12-131 (306)
334 PRK12490 6-phosphogluconate de 97.7 0.0008 1.7E-08 57.6 12.1 64 29-104 1-67 (299)
335 TIGR02685 pter_reduc_Leis pter 97.7 0.0033 7.1E-08 52.4 15.6 32 30-63 3-34 (267)
336 TIGR01829 AcAcCoA_reduct aceto 97.7 0.00077 1.7E-08 54.8 11.5 115 30-147 2-138 (242)
337 PRK06940 short chain dehydroge 97.7 0.00042 9.1E-09 58.3 10.1 112 30-146 4-126 (275)
338 PTZ00142 6-phosphogluconate de 97.7 0.00026 5.6E-09 64.5 9.4 98 28-148 1-104 (470)
339 PLN02968 Probable N-acetyl-gam 97.7 0.00015 3.3E-09 64.3 7.6 77 26-105 36-113 (381)
340 PRK07502 cyclohexadienyl dehyd 97.7 0.00061 1.3E-08 58.5 11.1 69 29-105 7-75 (307)
341 PRK07062 short chain dehydroge 97.7 0.0025 5.4E-08 52.9 14.5 115 29-146 9-146 (265)
342 TIGR02632 RhaD_aldol-ADH rhamn 97.7 0.00056 1.2E-08 65.1 11.6 116 29-146 415-553 (676)
343 PRK15461 NADH-dependent gamma- 97.7 0.00016 3.5E-09 61.9 7.3 64 29-104 2-65 (296)
344 PRK07201 short chain dehydroge 97.6 0.00065 1.4E-08 63.8 12.0 115 28-146 371-509 (657)
345 PLN02256 arogenate dehydrogena 97.6 0.0011 2.5E-08 57.0 12.4 65 27-104 35-100 (304)
346 PRK05671 aspartate-semialdehyd 97.6 0.00016 3.4E-09 63.2 7.1 73 26-105 2-75 (336)
347 TIGR02354 thiF_fam2 thiamine b 97.6 0.00068 1.5E-08 54.9 10.3 33 29-63 22-54 (200)
348 PRK08416 7-alpha-hydroxysteroi 97.6 0.006 1.3E-07 50.6 16.3 32 29-62 9-40 (260)
349 PRK09730 putative NAD(P)-bindi 97.6 0.00067 1.5E-08 55.3 10.3 116 29-146 2-142 (247)
350 PRK07679 pyrroline-5-carboxyla 97.6 0.00088 1.9E-08 56.8 11.1 68 29-104 4-73 (279)
351 PRK12480 D-lactate dehydrogena 97.6 0.00097 2.1E-08 58.1 11.5 63 26-104 144-206 (330)
352 PRK07041 short chain dehydroge 97.6 0.00032 6.9E-09 56.8 8.0 108 32-145 1-123 (230)
353 PRK08269 3-hydroxybutyryl-CoA 97.6 0.00021 4.6E-09 61.8 7.1 111 40-174 1-137 (314)
354 PF01113 DapB_N: Dihydrodipico 97.6 0.0016 3.5E-08 48.6 11.0 70 29-104 1-75 (124)
355 PF01488 Shikimate_DH: Shikima 97.6 0.00025 5.4E-09 53.8 6.6 73 28-107 12-86 (135)
356 PF02826 2-Hacid_dh_C: D-isome 97.6 0.00046 1E-08 54.7 8.4 69 24-105 32-100 (178)
357 PRK09599 6-phosphogluconate de 97.6 0.0015 3.2E-08 56.0 12.0 64 29-104 1-67 (301)
358 PRK06079 enoyl-(acyl carrier p 97.6 0.00038 8.2E-09 57.7 8.0 34 28-63 7-42 (252)
359 KOG1205 Predicted dehydrogenas 97.6 0.0021 4.6E-08 54.7 12.6 117 29-149 13-153 (282)
360 KOG1201 Hydroxysteroid 17-beta 97.6 0.002 4.3E-08 55.0 12.3 117 27-146 37-173 (300)
361 PRK06125 short chain dehydroge 97.5 0.0048 1E-07 51.0 14.6 114 29-146 8-140 (259)
362 PRK08818 prephenate dehydrogen 97.5 0.00092 2E-08 59.1 10.7 57 26-104 2-59 (370)
363 PF02558 ApbA: Ketopantoate re 97.5 0.00059 1.3E-08 52.1 8.4 116 31-173 1-122 (151)
364 cd01078 NAD_bind_H4MPT_DH NADP 97.5 0.00032 6.9E-09 56.2 7.0 74 29-105 29-106 (194)
365 PRK13243 glyoxylate reductase; 97.5 0.00074 1.6E-08 58.9 9.8 66 26-105 148-213 (333)
366 KOG2666 UDP-glucose/GDP-mannos 97.5 0.00028 6E-09 60.7 6.7 80 28-109 1-91 (481)
367 TIGR03443 alpha_am_amid L-amin 97.5 0.0015 3.3E-08 66.5 13.2 116 28-145 971-1108(1389)
368 PRK05599 hypothetical protein; 97.5 0.0083 1.8E-07 49.5 15.4 117 29-149 1-140 (246)
369 PRK08605 D-lactate dehydrogena 97.5 0.00049 1.1E-08 60.0 8.2 65 26-105 144-209 (332)
370 COG0345 ProC Pyrroline-5-carbo 97.5 0.0025 5.5E-08 53.8 12.0 96 28-148 1-98 (266)
371 PRK14874 aspartate-semialdehyd 97.5 0.00029 6.3E-09 61.4 6.5 72 28-106 1-73 (334)
372 PRK12491 pyrroline-5-carboxyla 97.5 0.00099 2.1E-08 56.5 9.6 66 29-104 3-71 (272)
373 PRK08040 putative semialdehyde 97.5 0.00034 7.5E-09 61.0 6.8 73 26-105 2-75 (336)
374 PRK03562 glutathione-regulated 97.5 0.0014 3E-08 61.8 11.4 138 28-196 400-541 (621)
375 PRK05708 2-dehydropantoate 2-r 97.4 0.0036 7.7E-08 53.9 13.0 115 28-173 2-125 (305)
376 PRK06484 short chain dehydroge 97.4 0.001 2.2E-08 60.8 10.1 114 29-146 6-141 (520)
377 PF03949 Malic_M: Malic enzyme 97.4 0.00049 1.1E-08 57.7 7.1 101 29-149 26-145 (255)
378 PRK15059 tartronate semialdehy 97.4 0.00044 9.5E-09 59.2 7.0 64 29-105 1-64 (292)
379 PRK08303 short chain dehydroge 97.4 0.01 2.2E-07 50.9 15.3 33 29-63 9-41 (305)
380 PLN02712 arogenate dehydrogena 97.4 0.0035 7.5E-08 59.6 13.4 65 27-104 51-116 (667)
381 COG0136 Asd Aspartate-semialde 97.4 0.0011 2.3E-08 57.6 9.0 74 28-106 1-76 (334)
382 PRK12748 3-ketoacyl-(acyl-carr 97.4 0.0058 1.3E-07 50.4 13.2 114 29-146 6-154 (256)
383 PRK12549 shikimate 5-dehydroge 97.4 0.001 2.2E-08 56.8 8.8 75 28-107 127-205 (284)
384 TIGR01289 LPOR light-dependent 97.4 0.0015 3.3E-08 56.1 9.9 114 29-146 4-143 (314)
385 PF03435 Saccharop_dh: Sacchar 97.4 0.0002 4.3E-09 63.3 4.5 73 31-106 1-77 (386)
386 PRK06505 enoyl-(acyl carrier p 97.4 0.013 2.9E-07 49.1 15.3 114 29-147 8-147 (271)
387 PRK06476 pyrroline-5-carboxyla 97.4 0.0016 3.5E-08 54.4 9.6 69 29-105 1-70 (258)
388 COG1712 Predicted dinucleotide 97.4 0.0022 4.7E-08 52.7 9.8 68 29-105 1-69 (255)
389 PRK15469 ghrA bifunctional gly 97.4 0.0015 3.2E-08 56.6 9.5 65 27-105 135-199 (312)
390 PRK07574 formate dehydrogenase 97.4 0.0016 3.4E-08 57.9 9.8 67 27-105 191-257 (385)
391 cd01487 E1_ThiF_like E1_ThiF_l 97.3 0.0026 5.6E-08 50.4 10.1 33 30-64 1-33 (174)
392 PRK07831 short chain dehydroge 97.3 0.0035 7.6E-08 51.9 11.4 115 29-145 18-156 (262)
393 PRK07791 short chain dehydroge 97.3 0.0046 9.9E-08 52.3 12.2 33 29-63 7-39 (286)
394 COG0287 TyrA Prephenate dehydr 97.3 0.0065 1.4E-07 51.8 12.9 68 28-106 3-74 (279)
395 PF00106 adh_short: short chai 97.3 0.0023 5E-08 49.1 9.4 116 30-149 2-138 (167)
396 PRK08507 prephenate dehydrogen 97.3 0.0024 5.1E-08 54.0 10.2 66 29-104 1-66 (275)
397 PRK06728 aspartate-semialdehyd 97.3 0.00069 1.5E-08 59.3 7.0 73 27-106 4-78 (347)
398 PRK07889 enoyl-(acyl carrier p 97.3 0.0068 1.5E-07 50.3 12.8 112 29-145 8-145 (256)
399 TIGR00873 gnd 6-phosphoglucona 97.3 0.0016 3.4E-08 59.4 9.6 70 30-104 1-71 (467)
400 PLN02383 aspartate semialdehyd 97.3 0.00068 1.5E-08 59.4 7.0 74 26-106 5-79 (344)
401 PRK08862 short chain dehydroge 97.3 0.0099 2.2E-07 48.7 13.6 114 29-146 6-144 (227)
402 PLN02712 arogenate dehydrogena 97.3 0.0053 1.1E-07 58.4 13.3 66 26-104 367-433 (667)
403 smart00822 PKS_KR This enzymat 97.3 0.0021 4.5E-08 49.0 8.9 113 30-146 2-136 (180)
404 PRK09496 trkA potassium transp 97.3 0.0014 3E-08 58.9 8.9 97 29-145 1-99 (453)
405 TIGR01327 PGDH D-3-phosphoglyc 97.3 0.0017 3.8E-08 60.0 9.6 68 25-105 135-202 (525)
406 TIGR01745 asd_gamma aspartate- 97.3 0.0015 3.3E-08 57.5 8.7 72 29-106 1-74 (366)
407 PRK07533 enoyl-(acyl carrier p 97.3 0.019 4E-07 47.7 15.0 113 29-146 11-149 (258)
408 PRK06598 aspartate-semialdehyd 97.3 0.002 4.2E-08 57.0 9.2 73 28-106 1-75 (369)
409 COG3967 DltE Short-chain dehyd 97.3 0.0046 9.9E-08 50.3 10.5 115 29-147 6-140 (245)
410 PRK06603 enoyl-(acyl carrier p 97.2 0.036 7.8E-07 46.1 16.4 117 29-147 9-148 (260)
411 TIGR01850 argC N-acetyl-gamma- 97.2 0.001 2.2E-08 58.3 7.2 74 29-105 1-77 (346)
412 cd01065 NAD_bind_Shikimate_DH 97.2 0.0017 3.6E-08 49.7 7.4 73 28-108 19-93 (155)
413 PF00899 ThiF: ThiF family; I 97.2 0.0018 4E-08 48.8 7.5 34 29-64 3-36 (135)
414 TIGR00518 alaDH alanine dehydr 97.2 0.0014 2.9E-08 58.1 7.7 75 27-107 166-241 (370)
415 KOG2711 Glycerol-3-phosphate d 97.2 0.0047 1E-07 53.6 10.7 129 20-168 13-167 (372)
416 KOG1208 Dehydrogenases with di 97.2 0.0095 2.1E-07 51.6 12.7 115 29-146 36-171 (314)
417 COG3320 Putative dehydrogenase 97.2 0.0031 6.6E-08 55.5 9.6 114 29-145 1-134 (382)
418 PLN02350 phosphogluconate dehy 97.2 0.0025 5.4E-08 58.4 9.5 69 27-104 5-80 (493)
419 PRK08644 thiamine biosynthesis 97.2 0.0034 7.3E-08 51.3 9.4 33 29-63 29-61 (212)
420 COG1893 ApbA Ketopantoate redu 97.2 0.0051 1.1E-07 53.1 10.9 97 29-149 1-105 (307)
421 cd05312 NAD_bind_1_malic_enz N 97.2 0.0027 5.9E-08 53.9 9.0 101 28-149 25-144 (279)
422 PRK08594 enoyl-(acyl carrier p 97.2 0.028 6.1E-07 46.7 14.9 33 29-63 8-42 (257)
423 PRK12859 3-ketoacyl-(acyl-carr 97.2 0.0097 2.1E-07 49.3 12.1 32 29-62 7-40 (256)
424 COG0111 SerA Phosphoglycerate 97.2 0.0025 5.4E-08 55.4 8.8 66 27-105 141-206 (324)
425 PRK08159 enoyl-(acyl carrier p 97.2 0.035 7.5E-07 46.6 15.6 113 29-146 11-149 (272)
426 PTZ00431 pyrroline carboxylate 97.2 0.0033 7.1E-08 52.8 9.2 60 29-104 4-65 (260)
427 PRK08415 enoyl-(acyl carrier p 97.1 0.01 2.3E-07 49.9 12.3 116 29-146 6-144 (274)
428 PRK05479 ketol-acid reductoiso 97.1 0.0036 7.9E-08 54.5 9.6 65 28-104 17-81 (330)
429 PF02254 TrkA_N: TrkA-N domain 97.1 0.0023 4.9E-08 46.6 7.2 95 31-146 1-97 (116)
430 PF00670 AdoHcyase_NAD: S-aden 97.1 0.0015 3.3E-08 51.1 6.5 69 25-106 20-88 (162)
431 PRK07984 enoyl-(acyl carrier p 97.1 0.025 5.3E-07 47.3 14.3 116 29-146 7-146 (262)
432 PRK10669 putative cation:proto 97.1 0.0024 5.2E-08 59.3 8.9 94 29-145 418-515 (558)
433 COG0002 ArgC Acetylglutamate s 97.1 0.0013 2.9E-08 57.1 6.5 74 28-104 2-78 (349)
434 PRK13581 D-3-phosphoglycerate 97.1 0.0028 6.1E-08 58.6 9.2 68 25-106 137-204 (526)
435 TIGR02356 adenyl_thiF thiazole 97.1 0.003 6.5E-08 51.2 8.3 33 29-63 22-54 (202)
436 PLN03139 formate dehydrogenase 97.1 0.006 1.3E-07 54.3 10.7 67 26-104 197-263 (386)
437 cd05213 NAD_bind_Glutamyl_tRNA 97.1 0.0063 1.4E-07 52.5 10.6 98 27-150 177-278 (311)
438 TIGR01500 sepiapter_red sepiap 97.1 0.0041 8.8E-08 51.5 9.1 33 30-64 2-38 (256)
439 PRK08690 enoyl-(acyl carrier p 97.1 0.084 1.8E-06 43.9 17.1 33 29-63 7-41 (261)
440 TIGR01724 hmd_rel H2-forming N 97.1 0.005 1.1E-07 53.3 9.6 56 40-104 31-89 (341)
441 KOG1200 Mitochondrial/plastidi 97.1 0.0086 1.9E-07 48.5 10.3 147 30-188 16-185 (256)
442 PRK00421 murC UDP-N-acetylmura 97.1 0.0062 1.3E-07 55.2 10.9 126 25-162 4-132 (461)
443 PRK07370 enoyl-(acyl carrier p 97.1 0.024 5.1E-07 47.1 13.5 33 29-63 7-41 (258)
444 PTZ00075 Adenosylhomocysteinas 97.1 0.0041 8.8E-08 56.6 9.4 67 27-106 253-319 (476)
445 KOG0409 Predicted dehydrogenas 97.1 0.0028 6.2E-08 54.1 7.8 68 28-107 35-102 (327)
446 PRK14806 bifunctional cyclohex 97.0 0.015 3.3E-07 55.7 13.8 69 29-105 4-72 (735)
447 PRK13304 L-aspartate dehydroge 97.0 0.0058 1.3E-07 51.5 9.8 69 28-105 1-70 (265)
448 PRK15409 bifunctional glyoxyla 97.0 0.0041 8.9E-08 54.0 9.0 66 26-105 143-209 (323)
449 TIGR01692 HIBADH 3-hydroxyisob 97.0 0.0038 8.2E-08 53.1 8.6 61 33-105 1-61 (288)
450 cd00401 AdoHcyase S-adenosyl-L 97.0 0.0087 1.9E-07 53.7 11.1 66 27-106 201-267 (413)
451 cd00762 NAD_bind_malic_enz NAD 97.0 0.00074 1.6E-08 56.5 4.1 99 28-149 25-145 (254)
452 PRK12475 thiamine/molybdopteri 97.0 0.0043 9.2E-08 54.3 9.0 74 29-104 25-124 (338)
453 PRK14106 murD UDP-N-acetylmura 97.0 0.0053 1.1E-07 55.3 9.8 124 28-162 5-133 (450)
454 KOG4039 Serine/threonine kinas 97.0 0.0028 6E-08 50.5 6.8 112 27-145 17-131 (238)
455 PRK06732 phosphopantothenate-- 97.0 0.031 6.8E-07 46.2 13.5 67 35-108 23-93 (229)
456 KOG1210 Predicted 3-ketosphing 97.0 0.012 2.6E-07 50.7 11.1 131 17-149 22-175 (331)
457 PRK07688 thiamine/molybdopteri 97.0 0.0049 1.1E-07 53.9 9.0 34 29-64 25-58 (339)
458 cd05311 NAD_bind_2_malic_enz N 97.0 0.011 2.4E-07 48.8 10.6 97 29-150 26-133 (226)
459 PRK09496 trkA potassium transp 97.0 0.013 2.8E-07 52.7 11.8 36 26-64 229-264 (453)
460 TIGR00936 ahcY adenosylhomocys 96.9 0.0067 1.5E-07 54.3 9.7 67 27-106 194-260 (406)
461 PLN02928 oxidoreductase family 96.9 0.005 1.1E-07 54.0 8.7 77 26-105 157-235 (347)
462 PRK00436 argC N-acetyl-gamma-g 96.9 0.0032 6.9E-08 55.1 7.5 33 28-61 2-35 (343)
463 PRK15116 sulfur acceptor prote 96.9 0.069 1.5E-06 45.2 15.2 33 29-63 31-63 (268)
464 PF02882 THF_DHG_CYH_C: Tetrah 96.9 0.0045 9.7E-08 48.5 7.4 56 27-107 35-90 (160)
465 TIGR01296 asd_B aspartate-semi 96.9 0.0016 3.4E-08 57.0 5.4 70 30-106 1-71 (339)
466 cd01483 E1_enzyme_family Super 96.9 0.011 2.3E-07 44.9 9.3 32 30-63 1-32 (143)
467 PLN00015 protochlorophyllide r 96.9 0.009 1.9E-07 51.1 9.9 112 32-147 1-138 (308)
468 PRK14194 bifunctional 5,10-met 96.9 0.0029 6.2E-08 54.4 6.7 55 28-107 159-213 (301)
469 PRK00048 dihydrodipicolinate r 96.9 0.0038 8.3E-08 52.4 7.4 66 28-104 1-68 (257)
470 TIGR00465 ilvC ketol-acid redu 96.9 0.0092 2E-07 51.7 9.7 64 29-104 4-67 (314)
471 PRK06407 ornithine cyclodeamin 96.9 0.0031 6.8E-08 54.2 6.8 95 4-105 95-191 (301)
472 PRK15438 erythronate-4-phospha 96.8 0.0051 1.1E-07 54.6 8.0 62 27-105 115-176 (378)
473 KOG1203 Predicted dehydrogenas 96.8 0.0099 2.2E-07 53.1 9.6 39 24-64 75-113 (411)
474 PRK09620 hypothetical protein; 96.8 0.0038 8.3E-08 51.6 6.6 74 28-107 3-98 (229)
475 TIGR02355 moeB molybdopterin s 96.8 0.0086 1.9E-07 49.9 8.7 34 29-64 25-58 (240)
476 PRK07340 ornithine cyclodeamin 96.8 0.0036 7.8E-08 53.9 6.5 92 5-105 103-197 (304)
477 cd00757 ThiF_MoeB_HesA_family 96.8 0.015 3.2E-07 47.9 9.9 34 29-64 22-55 (228)
478 KOG2865 NADH:ubiquinone oxidor 96.8 0.0035 7.6E-08 53.4 6.1 120 14-145 51-176 (391)
479 COG1052 LdhA Lactate dehydroge 96.8 0.014 3.1E-07 50.7 10.1 67 25-105 143-209 (324)
480 cd05212 NAD_bind_m-THF_DH_Cycl 96.8 0.0069 1.5E-07 46.4 7.1 55 28-107 28-82 (140)
481 PRK06436 glycerate dehydrogena 96.8 0.0068 1.5E-07 52.2 7.9 62 27-105 121-182 (303)
482 PRK13302 putative L-aspartate 96.8 0.0061 1.3E-07 51.6 7.5 69 28-106 6-77 (271)
483 KOG1014 17 beta-hydroxysteroid 96.7 0.022 4.7E-07 48.9 10.8 118 30-150 51-191 (312)
484 PRK01438 murD UDP-N-acetylmura 96.7 0.027 5.8E-07 51.3 12.2 138 14-162 3-147 (480)
485 cd01080 NAD_bind_m-THF_DH_Cycl 96.7 0.0057 1.2E-07 48.2 6.7 55 27-107 43-98 (168)
486 PRK00257 erythronate-4-phospha 96.7 0.0078 1.7E-07 53.5 8.2 62 27-105 115-176 (381)
487 PF07991 IlvN: Acetohydroxy ac 96.7 0.023 4.9E-07 44.5 9.8 65 28-104 4-68 (165)
488 PRK14192 bifunctional 5,10-met 96.7 0.0058 1.3E-07 52.2 7.0 56 27-107 158-213 (283)
489 PRK05690 molybdopterin biosynt 96.7 0.011 2.5E-07 49.3 8.6 33 29-63 33-65 (245)
490 PLN02494 adenosylhomocysteinas 96.7 0.02 4.4E-07 52.1 10.7 90 27-147 253-343 (477)
491 PRK14179 bifunctional 5,10-met 96.7 0.005 1.1E-07 52.5 6.4 57 27-108 157-213 (284)
492 cd01079 NAD_bind_m-THF_DH NAD 96.7 0.0065 1.4E-07 49.0 6.7 75 28-108 62-138 (197)
493 PRK00141 murD UDP-N-acetylmura 96.7 0.022 4.7E-07 52.0 11.0 134 14-162 5-146 (473)
494 PRK05476 S-adenosyl-L-homocyst 96.7 0.0063 1.4E-07 54.8 7.4 67 27-106 211-277 (425)
495 PRK08306 dipicolinate synthase 96.7 0.0059 1.3E-07 52.4 6.9 68 27-104 151-218 (296)
496 PRK06141 ornithine cyclodeamin 96.6 0.0053 1.2E-07 53.1 6.6 92 6-105 104-198 (314)
497 TIGR02853 spore_dpaA dipicolin 96.6 0.0049 1.1E-07 52.7 6.2 67 28-104 151-217 (287)
498 PRK06932 glycerate dehydrogena 96.6 0.016 3.4E-07 50.2 9.4 62 26-105 145-206 (314)
499 TIGR01082 murC UDP-N-acetylmur 96.6 0.017 3.7E-07 52.1 10.0 69 30-108 1-70 (448)
500 PRK08410 2-hydroxyacid dehydro 96.6 0.007 1.5E-07 52.3 7.1 62 27-105 144-205 (311)
No 1
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=8.6e-40 Score=280.05 Aligned_cols=181 Identities=67% Similarity=1.027 Sum_probs=164.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~ 108 (209)
|||+||||+|+||+++++.|+..++.+|++|+|++..+++++||.|...+..+.....++|++++++|||+||++||.|+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 69999999999999999999999998999999998667889999998744445432123456799999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEehhhHHHHHHHHHHH
Q 028437 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTFYAGK 188 (209)
Q Consensus 109 ~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~~lds~r~~~~la~~ 188 (209)
+||++|.|++..|.++++++++.+.+++|++++|++|||+|.+++++++++++.+++|++|++|+|.|||+|+++++|++
T Consensus 81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~ 160 (310)
T cd01337 81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL 160 (310)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred cCCCCCCeeEEEE--e-ccccccC
Q 028437 189 ANVNVAGLLKLLT--H-KNLVFIV 209 (209)
Q Consensus 189 l~v~~~~v~~~~i--~-g~~~~~~ 209 (209)
+|+++++|+++++ | |+++|++
T Consensus 161 l~v~~~~V~~~v~GeHsGds~vp~ 184 (310)
T cd01337 161 LGLDPAKVNVPVIGGHSGVTILPL 184 (310)
T ss_pred hCcCHHHEEEEEEecCCCCceecc
Confidence 9999999998888 7 7888863
No 2
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=1e-38 Score=273.82 Aligned_cols=180 Identities=61% Similarity=0.952 Sum_probs=162.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCCCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRK 109 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~~ 109 (209)
||+|+||+|.||+++++.|+..++++|++|+|+++..++++||.|......+..+.+.++++++++|||+||+++|.+++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~ 80 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK 80 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence 79999999999999999999999989999999987778889999976433444322223467899999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEehhhHHHHHHHHHHHc
Q 028437 110 PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKA 189 (209)
Q Consensus 110 ~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~~lds~r~~~~la~~l 189 (209)
+|++|.+++..|.++++++++.+.+++|++++|++|||+|.+++++++++++.++||++|+||+|.||++|+++++|+++
T Consensus 81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l 160 (312)
T TIGR01772 81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK 160 (312)
T ss_pred CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999898999999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEE--ecc-ccccC
Q 028437 190 NVNVAGLLKLLT--HKN-LVFIV 209 (209)
Q Consensus 190 ~v~~~~v~~~~i--~g~-~~~~~ 209 (209)
++++++|+++|+ ||. ++|++
T Consensus 161 ~v~~~~v~~~ViGeHg~~s~vp~ 183 (312)
T TIGR01772 161 GKDPMEVNVPVIGGHSGETIIPL 183 (312)
T ss_pred CCCHHHeEEEEEEecCCCccccc
Confidence 999999999988 765 77763
No 3
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=6.2e-38 Score=270.53 Aligned_cols=175 Identities=29% Similarity=0.365 Sum_probs=156.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEecCC----chhHHHhhcCCCCC--cceeEeecCCchhhh
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINTR--SEVAGYMGNDQLGQA 93 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~D~~~----~~~~~~dl~~~~~~--~~v~~~~~~~d~~~a 93 (209)
|++|+||+|+||+|.||+++++.|+..++++ +++|+|+++ ++++++||.|...+ ..+... + +.+++
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~-~~y~~ 77 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--D-DPNVA 77 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--c-ChHHH
Confidence 6788999999999999999999999999988 999999943 57789999998632 123322 2 34699
Q ss_pred cCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhC-CCCCCcEE
Q 028437 94 LEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAG-TYNEKKLF 171 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~-~~p~~~vi 171 (209)
++|||+||++||.++++|++|.|++..|+++++++++.+.+++ |++++|++|||+| ++++++++.+ +||++|+|
T Consensus 78 ~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvD----v~t~v~~k~s~g~p~~rVi 153 (326)
T PRK05442 78 FKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPAN----TNALIAMKNAPDLPAENFT 153 (326)
T ss_pred hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchH----HHHHHHHHHcCCCCHHHEE
Confidence 9999999999999999999999999999999999999999988 7999999999999 7888888887 99999999
Q ss_pred EEehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 172 GVTTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 172 g~~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
|+|.||++|+++++|++++++|++|++|+|||+++
T Consensus 154 G~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG 188 (326)
T PRK05442 154 AMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS 188 (326)
T ss_pred eeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence 99999999999999999999999999999877765
No 4
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=1.4e-37 Score=264.51 Aligned_cols=173 Identities=42% Similarity=0.627 Sum_probs=154.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCc--ceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRS--EVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~--~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+||+|+|| |+||+++++.|+.+++..|++|+|+++ .++.++||.|..... ..... .+.+ +++++|||+|+++|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~-~~~~-y~~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKIT-GDGD-YEDLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEe-cCCC-hhhhcCCCEEEEeC
Confidence 59999999 999999999998888877999999974 578899999987542 22222 2234 68899999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHHHH
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKT 183 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~~~ 183 (209)
|.|++|||+|.|++..|.++++++++++.+++|+++++++|||+| ++++++++.+++|++|+||. |.||++|+++
T Consensus 78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD----~~ty~~~k~sg~p~~rvig~gt~LDsaR~~~ 153 (313)
T COG0039 78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVD----ILTYIAMKFSGFPKNRVIGSGTVLDSARFRT 153 (313)
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHH----HHHHHHHHhcCCCccceecccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 88889999999999999999 7899999999
Q ss_pred HHHHHcCCCCCCeeEEEE--ecccccc
Q 028437 184 FYAGKANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 184 ~la~~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
+||+++++++++|+++|| ||.++|+
T Consensus 154 ~lae~~~v~~~~V~~~ViGeHGdt~vp 180 (313)
T COG0039 154 FLAEKLGVSPKDVHAYVIGEHGDTMVP 180 (313)
T ss_pred HHHHHhCCChhHceeeEeccCCCceEE
Confidence 999999999999999999 5666665
No 5
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=1.8e-37 Score=267.41 Aligned_cols=174 Identities=32% Similarity=0.395 Sum_probs=156.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEecCC----chhHHHhhcCCCCCc--ceeEeecCCchhhhc
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINTRS--EVAGYMGNDQLGQAL 94 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~D~~~----~~~~~~dl~~~~~~~--~v~~~~~~~d~~~a~ 94 (209)
++|.||+|+||+|+||+++++.|+..++++ |++|+|+++ .+++++|+.|...+. .... +.+.++++
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~~~~ 77 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA---TTDPEEAF 77 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE---ecChHHHh
Confidence 467899999999999999999999999998 999999953 578899999987321 2222 12346999
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCCcHHHHHHHHHHhC-CCCCCcEEE
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAG-TYNEKKLFG 172 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p-~~~viv~snP~~~~~~i~~~~~~~~~-~~p~~~vig 172 (209)
+|||+||++||.++++|++|.|++..|+++++++++++.+++| ++++|++|||+| ++++++++.+ +||++|+||
T Consensus 78 ~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvD----v~t~v~~k~s~g~p~~rViG 153 (323)
T TIGR01759 78 KDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPAN----TNALIASKNAPDIPPKNFSA 153 (323)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCHHHEEE
Confidence 9999999999999999999999999999999999999999998 999999999999 8888899988 999999999
Q ss_pred EehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 173 VTTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 173 ~~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
+|.||++|+++++|+++|++|++|++++|||+++
T Consensus 154 ~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG 187 (323)
T TIGR01759 154 MTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHS 187 (323)
T ss_pred eeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCC
Confidence 9999999999999999999999999998877764
No 6
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=9.3e-37 Score=262.65 Aligned_cols=181 Identities=72% Similarity=1.075 Sum_probs=166.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
+.||+||||+|.||+++++.|+.+++.+|++|+|+++..++++||.|......+..+..++|++++++|||+||++||.+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 35999999999999999999999999899999999877778889999876555554444567889999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEehhhHHHHHHHHHH
Q 028437 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTFYAG 187 (209)
Q Consensus 108 ~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~~lds~r~~~~la~ 187 (209)
++++++|.+.+..|.++++++++++++++|+++++++|||++.+++++++.+++.+++|++|++|+|.||++|+++++|+
T Consensus 98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~ 177 (323)
T PLN00106 98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAE 177 (323)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCeeEEEEecc---cccc
Q 028437 188 KANVNVAGLLKLLTHKN---LVFI 208 (209)
Q Consensus 188 ~l~v~~~~v~~~~i~g~---~~~~ 208 (209)
++|+++.+|+++|||++ ++|+
T Consensus 178 ~lgv~~~~V~~~ViGeHg~~s~vp 201 (323)
T PLN00106 178 KKGLDPADVDVPVVGGHAGITILP 201 (323)
T ss_pred HhCCChhheEEEEEEeCCCccEee
Confidence 99999999999999665 6665
No 7
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.8e-36 Score=259.71 Aligned_cols=171 Identities=28% Similarity=0.410 Sum_probs=154.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCC---cceeEeecCCchhhhcCCCCEEEEcC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR---SEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~---~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
||+|+|+ |.||+++++.|+.+++++|++|+|+++ .+++++||.|.... ..+... +.+ +++++|||+||++|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~--~~~-y~~~~~aDivvita 76 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR--AGD-YDDCADADIIVITA 76 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE--ECC-HHHhCCCCEEEECC
Confidence 7999999 999999999999999999999999975 57889999996531 233433 235 58999999999999
Q ss_pred CCCCCCCCC--hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHH
Q 028437 105 GVPRKPGMT--RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRA 181 (209)
Q Consensus 105 g~~~~~g~~--r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~ 181 (209)
|.+++||++ |.|++..|.++++++++.+.+++|++++|++|||+| ++++++++.++||++|+||+ |.|||+|+
T Consensus 77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvD----v~t~~~~k~sg~p~~rviG~gt~LDs~R~ 152 (307)
T cd05290 77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLD----IAVYIAATEFDYPANKVIGTGTMLDTARL 152 (307)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHH----HHHHHHHHHhCcChhheecccchHHHHHH
Confidence 999999998 699999999999999999999999999999999999 88899999999999999999 89999999
Q ss_pred HHHHHHHcCCCCCCeeEEEE--ecccccc
Q 028437 182 KTFYAGKANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 182 ~~~la~~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
++++|+++|+++++|++||+ ||+++|+
T Consensus 153 ~~~la~~l~v~~~~V~~~ViGeHGds~vp 181 (307)
T cd05290 153 RRIVADKYGVDPKNVTGYVLGEHGSHAFP 181 (307)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCCceEE
Confidence 99999999999999999966 6666665
No 8
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.2e-36 Score=258.06 Aligned_cols=177 Identities=28% Similarity=0.406 Sum_probs=156.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+.+||+|+|| |.||+++++.|+..++.+|++|+|+++ ..+.++||.|.........+..+.|+ ++++|||+||+++
T Consensus 2 ~~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~~~~~adivvita 79 (312)
T cd05293 2 PRNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-SVTANSKVVIVTA 79 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-HHhCCCCEEEECC
Confidence 3469999998 999999999999999999999999965 57889999998632111122223565 5699999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHHHH
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKT 183 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~~~ 183 (209)
|.++++|++|.+++..|+++++++++.+++++|++++|++|||++ ++++++++.+++|++|+||+ |.||++|+++
T Consensus 80 G~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d----~~t~~~~k~sg~p~~~viG~gt~Ld~~R~~~ 155 (312)
T cd05293 80 GARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVD----IMTYVAWKLSGLPKHRVIGSGCNLDSARFRY 155 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHH----HHHHHHHHHhCCCHHHEEecCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 88999999999999999999 8999999999
Q ss_pred HHHHHcCCCCCCeeEEEE--eccccccC
Q 028437 184 FYAGKANVNVAGLLKLLT--HKNLVFIV 209 (209)
Q Consensus 184 ~la~~l~v~~~~v~~~~i--~g~~~~~~ 209 (209)
++|+++++++++|+++++ ||+++|++
T Consensus 156 ~la~~l~v~~~~v~~~v~GeHG~s~vp~ 183 (312)
T cd05293 156 LIAERLGVAPSSVHGWIIGEHGDSSVPV 183 (312)
T ss_pred HHHHHhCCChhhEEEEEeecCCCCcccc
Confidence 999999999999999998 77777763
No 9
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=1e-35 Score=258.67 Aligned_cols=173 Identities=25% Similarity=0.423 Sum_probs=154.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCC-cceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~-~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
+||+|+|+ |.||+++++.|+..++.+|++|+|+++ ..++++||.|.... .... +..+.+ +++++|||+||++||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~~d-y~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILASTD-YAVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeCCC-HHHhCCCCEEEECCC
Confidence 69999998 999999999999999999999999975 57889999998632 1222 222345 467999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe-hhhHHHHHHH
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRAKTF 184 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~-~lds~r~~~~ 184 (209)
.++++|++|.|++..|+++++++++.+++++|++++|++|||+| ++++++++.++||++|+||++ .||++|++++
T Consensus 115 ~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvd----v~t~~~~k~sg~p~~rviG~gt~LDs~R~r~~ 190 (350)
T PLN02602 115 ARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVD----VLTYVAWKLSGFPANRVIGSGTNLDSSRFRFL 190 (350)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchH----HHHHHHHHHhCCCHHHEEeecchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 888888898899999999994 8999999999
Q ss_pred HHHHcCCCCCCeeEEEE--ecccccc
Q 028437 185 YAGKANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 185 la~~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
+|+++|+++++|+++|+ ||+++|+
T Consensus 191 lA~~l~v~~~~V~~~ViGeHGds~vp 216 (350)
T PLN02602 191 IADHLDVNAQDVQAYIVGEHGDSSVA 216 (350)
T ss_pred HHHHhCCCccceeeeEEecCCCceEe
Confidence 99999999999999977 6677765
No 10
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.2e-35 Score=242.43 Aligned_cols=173 Identities=27% Similarity=0.414 Sum_probs=157.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCC---cceeEeecCCchhhhcCCCCEEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR---SEVAGYMGNDQLGQALEDSDVVII 102 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~---~~v~~~~~~~d~~~a~~~aD~Vi~ 102 (209)
..||.|+|+ |.+|.+.+..++.+|+.+|++++|.++ +++..+||+|.... +++.. +.| +.+.+++++||+
T Consensus 20 ~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~D-y~~sa~S~lvIi 94 (332)
T KOG1495|consen 20 HNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKD-YSVSANSKLVII 94 (332)
T ss_pred CceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCc-ccccCCCcEEEE
Confidence 369999999 999999999999999999999999975 67889999998642 23332 446 478899999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHH
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRA 181 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~ 181 (209)
+||..+++|++|.+++++|+.+++.+++++-+|+|+++++++|||+| ++||+.++.++||++|+||. |+|||.||
T Consensus 95 TAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVD----ilTYv~wKLSgfP~nRViGsGcnLDsaRF 170 (332)
T KOG1495|consen 95 TAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVD----ILTYVTWKLSGFPKNRVIGSGCNLDSARF 170 (332)
T ss_pred ecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchH----HHHHHHHHHcCCcccceeccCcCccHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999 89999999
Q ss_pred HHHHHHHcCCCCCCeeEEEE--eccccccC
Q 028437 182 KTFYAGKANVNVAGLLKLLT--HKNLVFIV 209 (209)
Q Consensus 182 ~~~la~~l~v~~~~v~~~~i--~g~~~~~~ 209 (209)
|++++++||++|+++++||| ||.+.-+|
T Consensus 171 ryLi~~~Lg~~pss~hgwIiGEHGdSsV~v 200 (332)
T KOG1495|consen 171 RYLIGNRLGVHPSSCHGWIIGEHGDSSVPV 200 (332)
T ss_pred HHHHHHHhCCCcccceEEEeeccCCcccee
Confidence 99999999999999999999 88876543
No 11
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.3e-35 Score=255.97 Aligned_cols=170 Identities=33% Similarity=0.419 Sum_probs=151.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEecCC----chhHHHhhcCCCCC--cceeEeecCCchhhhcCCCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSD 98 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~D~~~----~~~~~~dl~~~~~~--~~v~~~~~~~d~~~a~~~aD 98 (209)
||+||||+|+||++++..|+..++++ +++|+|+++ .++.++|+.|...+ ..... +.+.+++++|||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i---~~~~~~~~~~aD 78 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVI---TTDPEEAFKDVD 78 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEE---ecChHHHhCCCC
Confidence 89999999999999999999988877 599999975 46678899988532 11222 124479999999
Q ss_pred EEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCC-CCCCcEEEEehh
Q 028437 99 VVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGT-YNEKKLFGVTTL 176 (209)
Q Consensus 99 ~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~-~p~~~vig~~~l 176 (209)
+||++||.++++|++|.|++..|+++++++++.+++++ |++++|++|||+| ++++++++.++ +|++||||+|.|
T Consensus 79 iVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD----~~t~~~~k~sg~~p~~~vig~t~L 154 (323)
T cd00704 79 VAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPAN----TNALIALKNAPNLPPKNFTALTRL 154 (323)
T ss_pred EEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCHHHEEEeeHH
Confidence 99999999999999999999999999999999999996 9999999999999 88888999999 599999999999
Q ss_pred hHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 177 DVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 177 ds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
|++|++++||++++++|++|++++|||+++
T Consensus 155 Ds~R~r~~la~~l~v~~~~V~~~~V~GeHG 184 (323)
T cd00704 155 DHNRAKAQVARKLGVRVSDVKNVIIWGNHS 184 (323)
T ss_pred HHHHHHHHHHHHhCcCHHHceeeeEEeccc
Confidence 999999999999999999999988888864
No 12
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=2.8e-35 Score=261.48 Aligned_cols=176 Identities=28% Similarity=0.279 Sum_probs=156.1
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhC-------CCccEEEEEecCC--chhHHHhhcCCCCC--cceeEeecCCchhh
Q 028437 24 ESVPDRKVAVLGAAGGIGQPLALLMKLN-------PLVSRLALYDIAN--TPGVAADVGHINTR--SEVAGYMGNDQLGQ 92 (209)
Q Consensus 24 ~~~~~~kI~IiGasG~vG~~la~~L~~~-------g~~~ev~l~D~~~--~~~~~~dl~~~~~~--~~v~~~~~~~d~~~ 92 (209)
+.+++.||+||||+|+||+++++.|+.. ++..|++++|+++ ++++++||.|..++ ..+... +.+ ++
T Consensus 96 ~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~--~~~-ye 172 (444)
T PLN00112 96 SWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG--IDP-YE 172 (444)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe--cCC-HH
Confidence 3556789999999999999999999998 6666999999975 57889999998633 123221 334 68
Q ss_pred hcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHh-hCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEE
Q 028437 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAK-YCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLF 171 (209)
Q Consensus 93 a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~-~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vi 171 (209)
+++|||+||+++|.|+++|++|.|++..|.++++++++.+.+ ++|++++|++|||+| ++++++++.+++|++|+|
T Consensus 173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvD----v~t~v~~k~sg~~~~rVi 248 (444)
T PLN00112 173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCN----TNALICLKNAPNIPAKNF 248 (444)
T ss_pred HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHH----HHHHHHHHHcCCCCcceE
Confidence 999999999999999999999999999999999999999999 589999999999999 888889999999999999
Q ss_pred EE-ehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 172 GV-TTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 172 g~-~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
|. |.||++|++++||+++|+++++|++++||||++
T Consensus 249 GtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHG 284 (444)
T PLN00112 249 HALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS 284 (444)
T ss_pred EeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCC
Confidence 99 789999999999999999999999988888874
No 13
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=6.4e-35 Score=251.63 Aligned_cols=172 Identities=28% Similarity=0.378 Sum_probs=154.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEecCC----chhHHHhhcCCCCC--cceeEeecCCchhhhcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINTR--SEVAGYMGNDQLGQALED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~D~~~----~~~~~~dl~~~~~~--~~v~~~~~~~d~~~a~~~ 96 (209)
|+||+|+||+|.||+++++.|+..++++ |++|+|+++ ++++++|+.|...+ ..+... +.+ +++++|
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~d 78 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFKD 78 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhCC
Confidence 5799999999999999999999999999 999999943 57789999998632 223332 234 689999
Q ss_pred CCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhC-CCCCCcEEEEe
Q 028437 97 SDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAG-TYNEKKLFGVT 174 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~-~~p~~~vig~~ 174 (209)
||+||++||.++++|++|.+++..|+++++++++.+++++ |++++|++|||+| ++++++++.+ +||+++++|+|
T Consensus 79 aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD----~~t~~~~k~sg~~p~~~ViG~t 154 (322)
T cd01338 79 ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCN----TNALIAMKNAPDIPPDNFTAMT 154 (322)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHH----HHHHHHHHHcCCCChHheEEeh
Confidence 9999999999999999999999999999999999999999 5999999999999 7788888888 59999999999
Q ss_pred hhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 175 TLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 175 ~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
.||+.|+++++|+++|+++++|++++|||+++
T Consensus 155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 99999999999999999999999999988864
No 14
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=9.7e-35 Score=250.06 Aligned_cols=175 Identities=27% Similarity=0.402 Sum_probs=154.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCC-cceeEeecCCchhhhcCCCCEEEE
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVII 102 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~-~~v~~~~~~~d~~~a~~~aD~Vi~ 102 (209)
+..+||+|+|| |.||+++++.|+..++++|++|+|+++ .++.++|+.|.... ..+... +++ ++++++||+||+
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~-~~~~~~adivIi 79 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGD-YSDCKDADLVVI 79 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCC-HHHhCCCCEEEE
Confidence 34479999999 999999999999999999999999965 57889999998632 233332 234 578999999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHH
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRA 181 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~ 181 (209)
++|.+++||++|.|++..|+++++++++.+++++|++++|++|||++ ++++++++.+++|++|++|+ |.+|+.|+
T Consensus 80 tag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d----~~~~~~~k~sg~p~~~viG~gt~LDs~R~ 155 (315)
T PRK00066 80 TAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVD----ILTYATWKLSGFPKERVIGSGTSLDSARF 155 (315)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHH----HHHHHHHHHhCCCHHHEeecCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999 78888888889999999999 58999999
Q ss_pred HHHHHHHcCCCCCCeeEEEE--ecccccc
Q 028437 182 KTFYAGKANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 182 ~~~la~~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
++++|+++|+++++|+++++ ||+++|+
T Consensus 156 ~~~la~~l~v~~~~V~~~viGeHG~s~v~ 184 (315)
T PRK00066 156 RYMLSEKLDVDPRSVHAYIIGEHGDTEFP 184 (315)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCCccee
Confidence 99999999999999999866 4555554
No 15
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=2e-34 Score=247.96 Aligned_cols=179 Identities=55% Similarity=0.834 Sum_probs=157.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
+|.||+||||+|.||+.+++.|+..+..++++|+|++...++++||.|......+.......+++++++|||+||+++|.
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~ 86 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGV 86 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCC
Confidence 45699999999999999999999888888999999966678888999876543444332223446899999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHH----HHhCCCCCCcEEEEehhhHHHHH
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVF----KKAGTYNEKKLFGVTTLDVVRAK 182 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~----~~~~~~p~~~vig~~~lds~r~~ 182 (209)
+++++++|.+++..|+++++++++++++++|+++++++|||++ ++++++ ++.+++|+++++|++.|||+|++
T Consensus 87 ~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd----v~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r 162 (321)
T PTZ00325 87 PRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN----STVPIAAETLKKAGVYDPRKLFGVTTLDVVRAR 162 (321)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHhhhhhccCCChhheeechhHHHHHHH
Confidence 9999999999999999999999999999999999999999999 555555 47888999999999889999999
Q ss_pred HHHHHHcCCCCCCeeEEEE--ecc-ccccC
Q 028437 183 TFYAGKANVNVAGLLKLLT--HKN-LVFIV 209 (209)
Q Consensus 183 ~~la~~l~v~~~~v~~~~i--~g~-~~~~~ 209 (209)
+++|+++|++|++|++||+ ||+ ++|++
T Consensus 163 ~~la~~l~v~~~~V~~~VlGeHGd~s~v~~ 192 (321)
T PTZ00325 163 KFVAEALGMNPYDVNVPVVGGHSGVTIVPL 192 (321)
T ss_pred HHHHHHhCcChhheEEEEEeecCCcccccc
Confidence 9999999999999999999 898 78874
No 16
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=1.1e-34 Score=254.27 Aligned_cols=177 Identities=29% Similarity=0.306 Sum_probs=153.2
Q ss_pred CCCCCCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEE--ecCC--chhHHHhhcCCCCC--cceeEeecCCchh
Q 028437 23 SESVPDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALY--DIAN--TPGVAADVGHINTR--SEVAGYMGNDQLG 91 (209)
Q Consensus 23 ~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~--D~~~--~~~~~~dl~~~~~~--~~v~~~~~~~d~~ 91 (209)
++.+++.||+||||+|.||+++++.|+..++++ .++|+ |+++ .+++++||.|..++ ..+... +.+ +
T Consensus 39 ~~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y 115 (387)
T TIGR01757 39 KSWKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-Y 115 (387)
T ss_pred hcCCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-H
Confidence 345567899999999999999999999999988 56667 5543 57889999998632 122221 334 6
Q ss_pred hhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcE
Q 028437 92 QALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKL 170 (209)
Q Consensus 92 ~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~v 170 (209)
++++|||+||++||.|+++|++|.|++..|+++++++++.+.+++ |++++|++|||+| ++++++++.+++|++|+
T Consensus 116 ~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvD----v~t~v~~k~sg~~~~rv 191 (387)
T TIGR01757 116 EVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCN----TNALIAMKNAPNIPRKN 191 (387)
T ss_pred HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHH----HHHHHHHHHcCCCcccE
Confidence 899999999999999999999999999999999999999999987 9999999999999 78888889888999999
Q ss_pred EEE-ehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 171 FGV-TTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 171 ig~-~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
||+ |.||++|++++||+++++++++|+..+||||++
T Consensus 192 iG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHG 228 (387)
T TIGR01757 192 FHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHS 228 (387)
T ss_pred EEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCC
Confidence 999 789999999999999999999998777777753
No 17
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=7.7e-35 Score=240.22 Aligned_cols=192 Identities=68% Similarity=0.961 Sum_probs=179.6
Q ss_pred ccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhc
Q 028437 15 PAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL 94 (209)
Q Consensus 15 ~~~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~ 94 (209)
+..-|.|.+-..+..||+|.||+|.||+.|...|....+++++.|||+....+...|+.|.+....+..+.+.+.+++++
T Consensus 15 ~~~~~~~~~~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al 94 (345)
T KOG1494|consen 15 SGPKRVFSSGSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENAL 94 (345)
T ss_pred cCCcccccccccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHh
Confidence 34456688888888999999999999999999999999999999999988888999999999888888887777899999
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT 174 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~ 174 (209)
+++|+||+-||+|++|||+|+|++..|..++++++.++.++||++.+.++|||++++++++++++++.+.|+|.|++|+|
T Consensus 95 ~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVT 174 (345)
T KOG1494|consen 95 KGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVT 174 (345)
T ss_pred cCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccchHHHHHHHHcCCCCccceecee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHcCCCC-CCeeEEEEecccc
Q 028437 175 TLDVVRAKTFYAGKANVNV-AGLLKLLTHKNLV 206 (209)
Q Consensus 175 ~lds~r~~~~la~~l~v~~-~~v~~~~i~g~~~ 206 (209)
.||..|++.++++.++++| +++.-.+|+|-++
T Consensus 175 tLDvVRA~tFv~~~~~~~p~~~v~VPVIGGHaG 207 (345)
T KOG1494|consen 175 TLDVVRANTFVAEVLNLDPAEDVDVPVIGGHAG 207 (345)
T ss_pred hhhhhhHHHHHHHHhCCCchhcCCcceecCcCC
Confidence 9999999999999999999 6699889988664
No 18
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=1.2e-34 Score=247.72 Aligned_cols=168 Identities=27% Similarity=0.395 Sum_probs=151.0
Q ss_pred EEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCc--ceeEeecCCchhhhcCCCCEEEEcCCCCC
Q 028437 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRS--EVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (209)
Q Consensus 33 IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~--~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~ 108 (209)
|||+ |.||+++++.|+..++++|++|+|+++ .+++++||.|..... .+... ..+ +++++|||+||++||.++
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGD-YSDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCC-HHHHCCCCEEEECCCCCC
Confidence 6898 999999999999999999999999965 578899999986422 22322 234 589999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHHHHHHHH
Q 028437 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTFYAG 187 (209)
Q Consensus 109 ~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~~~~la~ 187 (209)
+||++|.|++..|+++++++++.+++++|++++|++|||+| ++++++++.+++|++|++|+ |.||++|+++++|+
T Consensus 77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d----~~t~~~~~~sg~p~~~viG~gt~LDs~R~~~~la~ 152 (299)
T TIGR01771 77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVD----ILTYVAWKLSGFPKNRVIGSGTVLDTARLRYLLAE 152 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHH----HHHHHHHHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 88889999999999999999 68999999999999
Q ss_pred HcCCCCCCeeEEEE--ecccccc
Q 028437 188 KANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 188 ~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
++++++++|+++++ ||+++|+
T Consensus 153 ~l~v~~~~V~~~v~GeHG~s~vp 175 (299)
T TIGR01771 153 KLGVDPQSVHAYIIGEHGDSEVP 175 (299)
T ss_pred HhCcCcCeEEEEEEecCCCceee
Confidence 99999999999977 6677776
No 19
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=1.1e-33 Score=242.87 Aligned_cols=171 Identities=31% Similarity=0.430 Sum_probs=149.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCC--cceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~--~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+||+|+|+ |.+|++++..|+..|+..+|+++|+++ .++.+.|+.+.... ...... ..+ ++++++||+||+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~-~~~l~~aDIVIita 76 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGD-YSDCKDADIVVITA 76 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCC-HHHhCCCCEEEEcc
Confidence 38999999 999999999999999767999999975 35677888776432 122222 234 46799999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHHHH
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKT 183 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~~~ 183 (209)
|.++++|++|.+++..|+++++++++.+++++|++++|++|||+| ++++++++.++||++|+||+ |.||++|+++
T Consensus 77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d----~~~~~~~~~~g~p~~~v~g~gt~LDs~R~~~ 152 (306)
T cd05291 77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVD----VITYVVQKLSGLPKNRVIGTGTSLDTARLRR 152 (306)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHH----HHHHHHHHHhCcCHHHEeeccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 88999999999999999999 6899999999
Q ss_pred HHHHHcCCCCCCeeEEEEecc---cccc
Q 028437 184 FYAGKANVNVAGLLKLLTHKN---LVFI 208 (209)
Q Consensus 184 ~la~~l~v~~~~v~~~~i~g~---~~~~ 208 (209)
++|+++++++++|+++ |||+ ++|+
T Consensus 153 ~la~~l~v~~~~v~~~-V~G~Hg~s~~~ 179 (306)
T cd05291 153 ALAEKLNVDPRSVHAY-VLGEHGDSQFV 179 (306)
T ss_pred HHHHHHCCCcccceEE-EEecCCCceee
Confidence 9999999999999996 6555 5554
No 20
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-33 Score=241.44 Aligned_cols=179 Identities=56% Similarity=0.840 Sum_probs=151.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHh-CCCccEEEEEecCC-chhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKL-NPLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~-~g~~~ev~l~D~~~-~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
|||+|+||+|.+|+++++.|.. .+...+++++|+++ ..+.++|+.|......+.. ...++++++++++|+||+++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~-~~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE-eCCCCHHHHcCCCCEEEEcCCC
Confidence 6999999999999999998865 45566999999864 3345578877432223332 1134667899999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEehhhHHHHHHHHH
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTFYA 186 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~~lds~r~~~~la 186 (209)
+++++++|.+++..|++++++++++|++++|+++++++|||+|.+++++.+.+++.+++|++|+||+|.||++|+++++|
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia 159 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA 159 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997777766667799999999999999999999999999
Q ss_pred HHcCCCCCCeeEEEE--ecc-cccc
Q 028437 187 GKANVNVAGLLKLLT--HKN-LVFI 208 (209)
Q Consensus 187 ~~l~v~~~~v~~~~i--~g~-~~~~ 208 (209)
+++|+++++|+++++ ||. ++|+
T Consensus 160 ~~l~~~~~~v~~~v~GeHg~~s~~p 184 (312)
T PRK05086 160 ELKGKQPGEVEVPVIGGHSGVTILP 184 (312)
T ss_pred HHhCCChhheEEEEEEecCCCceec
Confidence 999999999998887 533 6665
No 21
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=1.7e-33 Score=242.95 Aligned_cols=172 Identities=30% Similarity=0.370 Sum_probs=148.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEecCC----chhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEE
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVV 100 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~D~~~----~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~V 100 (209)
||+||||+|.||+++++.|...++++ +++|+|+++ ++++++|+.|...... .....+++.+++++|||+|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~-~~~~~~~~~~~~~~~aDiV 79 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLL-DGVVPTHDPAVAFTDVDVA 79 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhc-CceeccCChHHHhCCCCEE
Confidence 69999999999999999999988875 799999953 4577889999873321 1112223447899999999
Q ss_pred EEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhH
Q 028437 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDV 178 (209)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds 178 (209)
|++||.+++++++|.+++..|+++++++++++.+++ |++++|++|||+| ++++++++.+++++.++||+ |.||+
T Consensus 80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvD----v~t~v~~~~sg~~~~~vig~gt~LDs 155 (324)
T TIGR01758 80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPAN----TNALVLSNYAPSIPPKNFSALTRLDH 155 (324)
T ss_pred EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCcceEEEeeehHH
Confidence 999999999999999999999999999999999995 9999999999999 88889999887777789999 78999
Q ss_pred HHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 179 VRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 179 ~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
+|++++||++++++|++|++.+|||+++
T Consensus 156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG 183 (324)
T TIGR01758 156 NRALAQVAERAGVPVSDVKNVIIWGNHS 183 (324)
T ss_pred HHHHHHHHHHhCCChhhceEeEEEECCC
Confidence 9999999999999999999888877764
No 22
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.8e-33 Score=243.13 Aligned_cols=172 Identities=31% Similarity=0.397 Sum_probs=148.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEecCC----chhHHHhhcCCCCC--cceeEeecCCchhhhcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIAN----TPGVAADVGHINTR--SEVAGYMGNDQLGQALE 95 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~D~~~----~~~~~~dl~~~~~~--~~v~~~~~~~d~~~a~~ 95 (209)
+|.||+||||+|++|++++..|+..++++ +|+++|+++ +.+...|+.|...+ ..+.. +.+++++++
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~ 77 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK 77 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence 36799999999999999999999988764 999999953 35566788876422 12222 346779999
Q ss_pred CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHh-CCCCCCcEEEE
Q 028437 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKA-GTYNEKKLFGV 173 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~-~~~p~~~vig~ 173 (209)
|||+|||+||.+++++++|.+++..|+++++++++.+++++ |++++|++|||+| ++++++++. +++|+++ ||+
T Consensus 78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD----~~t~~~~k~~~~~~~~~-ig~ 152 (325)
T cd01336 78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPAN----TNALILLKYAPSIPKEN-FTA 152 (325)
T ss_pred CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHH----HHHHHHHHHcCCCCHHH-EEe
Confidence 99999999999999999999999999999999999999997 7999999999999 788888887 5788888 666
Q ss_pred -ehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 174 -TTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 174 -~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
|.||++|+++++|+++++++++|++++|||+++
T Consensus 153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG 186 (325)
T cd01336 153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHS 186 (325)
T ss_pred eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCC
Confidence 799999999999999999999999999988765
No 23
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=2.8e-33 Score=239.68 Aligned_cols=171 Identities=32% Similarity=0.502 Sum_probs=152.1
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCC-cceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~-~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
|+|+|+ |.||++++..|+..|++.+++++|+++ ..+.++||.|.... ...... .+++ ++++++||+||+++|.|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~-~~~~-~~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIV-RGGD-YADAADADIVVITAGAP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEE-ECCC-HHHhCCCCEEEEcCCCC
Confidence 689999 999999999999999888999999975 46788899988653 112222 1345 57999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHHHHHHH
Q 028437 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTFYA 186 (209)
Q Consensus 108 ~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~~~~la 186 (209)
++++++|.+++..|+++++++++.+++++|++++|++|||++ ++++++++.+++|++|++|+ |.+|+.|+++++|
T Consensus 78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d----~~~~~~~~~sg~~~~kviG~gt~lDs~r~~~~la 153 (300)
T cd00300 78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVD----ILTYVAQKLSGLPKNRVIGSGTLLDSARFRSLLA 153 (300)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHH----HHHHHHHHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 88999999999999999999 5799999999999
Q ss_pred HHcCCCCCCeeEEEE--ecccccc
Q 028437 187 GKANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 187 ~~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
+++++++++|+++++ ||+++|+
T Consensus 154 ~~l~v~~~~v~~~viGeHg~s~v~ 177 (300)
T cd00300 154 EKLDVDPQSVHAYVLGEHGDSQVV 177 (300)
T ss_pred HHhCCCcccEEEEEEeccCCceee
Confidence 999999999999988 6677765
No 24
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.4e-33 Score=250.68 Aligned_cols=177 Identities=18% Similarity=0.220 Sum_probs=153.9
Q ss_pred CCCCCCCeEEEEcCCCchHHHHHHHHHhCCCcc-----EEEEEecC--C--chhHHHhhcCCCCCc--ceeEeecCCchh
Q 028437 23 SESVPDRKVAVLGAAGGIGQPLALLMKLNPLVS-----RLALYDIA--N--TPGVAADVGHINTRS--EVAGYMGNDQLG 91 (209)
Q Consensus 23 ~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~-----ev~l~D~~--~--~~~~~~dl~~~~~~~--~v~~~~~~~d~~ 91 (209)
.+++++.+|+|+||+|.+|++|+..+++..+++ .++|+|++ . +++.++||.|+.++. .+... + +.+
T Consensus 118 ~~~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~-~~~ 194 (452)
T cd05295 118 RSKINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--T-DLD 194 (452)
T ss_pred hcCCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--E-CCH
Confidence 346678899999999999999999999876543 69999994 2 578899999986431 23332 2 347
Q ss_pred hhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCC--CeEEEEecCCCCCcHHHHHHHHHHhC-CCCCC
Q 028437 92 QALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP--NAIVNMISNPVNSTVPIAAEVFKKAG-TYNEK 168 (209)
Q Consensus 92 ~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p--~~~viv~snP~~~~~~i~~~~~~~~~-~~p~~ 168 (209)
++++|||+||+++|.|+++|++|.|++..|.++++++++++.+++| ++++|++|||+| ++++++++.+ ++|++
T Consensus 195 ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD----~~t~i~~k~apgiP~~ 270 (452)
T cd05295 195 VAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLN----LKTSILIKYAPSIPRK 270 (452)
T ss_pred HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHH----HHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999999999999999998 788888899999 6677777766 99999
Q ss_pred cEEEEehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 169 KLFGVTTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 169 ~vig~~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
||+|++.+|++|++++||+++|+++++|+..+||||++
T Consensus 271 rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG 308 (452)
T cd05295 271 NIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIG 308 (452)
T ss_pred HEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccC
Confidence 99999888899999999999999999999999999876
No 25
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-32 Score=237.49 Aligned_cols=174 Identities=34% Similarity=0.609 Sum_probs=151.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCc--ceeEeecCCchhhhcCCCCEEEE
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRS--EVAGYMGNDQLGQALEDSDVVII 102 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~--~v~~~~~~~d~~~a~~~aD~Vi~ 102 (209)
+.+||+|+|| |.+|+++++.++..++ .+|+|+|+++ ..+.++|+.+..... ... +..++|+ ++++|||+||+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~~~d~-~~l~~ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILGTNNY-EDIKDSDVVVI 79 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeE-EEeCCCH-HHhCCCCEEEE
Confidence 4569999999 9999999999999986 5899999975 356778888774321 122 2224576 48999999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe-hhhHHHH
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRA 181 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~-~lds~r~ 181 (209)
++|.+++++++|.|++..|.++++++++.++++||++++|++|||++ ++++.+++.+++|++|++|+| .+|++|+
T Consensus 80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~d----i~t~~~~~~s~~p~~rviG~gt~lds~R~ 155 (319)
T PTZ00117 80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLD----CMVKVFQEKSGIPSNKICGMAGVLDSSRF 155 (319)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHH----HHHHHHHHhhCCCcccEEEecchHHHHHH
Confidence 99999999999999999999999999999999999999999999999 778888899999999999997 7999999
Q ss_pred HHHHHHHcCCCCCCeeEEEE--ecccccc
Q 028437 182 KTFYAGKANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 182 ~~~la~~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
++++|+++|+++++|+++++ ||+++|+
T Consensus 156 ~~~la~~l~v~~~~v~~~viGeHg~~~v~ 184 (319)
T PTZ00117 156 RCNLAEKLGVSPGDVSAVVIGGHGDLMVP 184 (319)
T ss_pred HHHHHHHhCCCcccceEEEeecCCCcEEe
Confidence 99999999999999999999 6666655
No 26
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=1.4e-32 Score=231.25 Aligned_cols=171 Identities=35% Similarity=0.482 Sum_probs=148.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCC--CccEEEEEecCC--chhHHHhhcCCCCCc-ceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNP--LVSRLALYDIAN--TPGVAADVGHINTRS-EVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g--~~~ev~l~D~~~--~~~~~~dl~~~~~~~-~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|+|+||+|.+|.+++..|+..+ ...+|+|+|+++ +++...|+.+..... ..+ +..++|++++++|||+||+++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~-i~~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIK-VSITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcE-EEECCchHHHhCCCCEEEECCC
Confidence 6899999999999999999998 667999999975 456777887765432 122 2235677899999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEehhhHHHHHHHH
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTFY 185 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~~lds~r~~~~l 185 (209)
.++++|++|.+.+.+|++++++++++++++||++|+|++|||++ ++++++++.+++|++|+||+|.+|+.|+++++
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d----~~t~~~~~~sg~~~~kviG~~~ld~~r~~~~l 155 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVD----IITYLVWRYSGLPKEKVIGLGTLDPIRFRRIL 155 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHhCCCchhEEEeecchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 88889999999999999999779999999999
Q ss_pred HHHcCCCCCCeeEEEEeccccc
Q 028437 186 AGKANVNVAGLLKLLTHKNLVF 207 (209)
Q Consensus 186 a~~l~v~~~~v~~~~i~g~~~~ 207 (209)
|+++++++++|++ .+||++++
T Consensus 156 a~~l~v~~~~v~~-~v~G~hg~ 176 (263)
T cd00650 156 AEKLGVDPDDVKV-YILGEHGG 176 (263)
T ss_pred HHHhCCCccceEE-EEEEcCCC
Confidence 9999999999994 45555443
No 27
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=2.6e-32 Score=235.47 Aligned_cols=177 Identities=33% Similarity=0.612 Sum_probs=152.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCC--CcceeEeecCCchhhhcCCCCEE
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINT--RSEVAGYMGNDQLGQALEDSDVV 100 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~--~~~v~~~~~~~d~~~a~~~aD~V 100 (209)
|.+.+||+|+|| |.+|++++..++..|+ .+|+|+|+++. .+..+|+.+... ....+. ..++|+ ++++|||+|
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl-~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I-~~~~d~-~~l~~aDiV 78 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNL-GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKV-IGTNNY-EDIAGSDVV 78 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEE-EECCCH-HHhCCCCEE
Confidence 445579999998 9999999999999997 36999999763 456777777532 111222 224575 789999999
Q ss_pred EEcCCCCCCCCC-----ChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe-
Q 028437 101 IIPAGVPRKPGM-----TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT- 174 (209)
Q Consensus 101 i~~ag~~~~~g~-----~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~- 174 (209)
|+++|.++++++ +|.+.+..|+++++++++.+++++|++++|++|||++ ++++.+++.+++|++|++|+|
T Consensus 79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~d----i~t~~~~~~sg~p~~rviGlgt 154 (321)
T PTZ00082 79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLD----VMVKLLQEHSGLPKNKVCGMAG 154 (321)
T ss_pred EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHhcCCChhhEEEecC
Confidence 999999999999 9999999999999999999999999999999999999 788888999999999999997
Q ss_pred hhhHHHHHHHHHHHcCCCCCCeeEEEE--eccccccC
Q 028437 175 TLDVVRAKTFYAGKANVNVAGLLKLLT--HKNLVFIV 209 (209)
Q Consensus 175 ~lds~r~~~~la~~l~v~~~~v~~~~i--~g~~~~~~ 209 (209)
.+|+.|+++++|+++++++++|+++++ ||+++|++
T Consensus 155 ~lds~R~~~~la~~l~v~~~~v~~~viGeHg~s~v~~ 191 (321)
T PTZ00082 155 VLDSSRLRTYIAEKLGVNPRDVHASVIGAHGDKMVPL 191 (321)
T ss_pred cccHHHHHHHHHHHhCCCcccceeeEEecCCCceEec
Confidence 799999999999999999999999999 77788763
No 28
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=1.7e-32 Score=235.25 Aligned_cols=174 Identities=30% Similarity=0.528 Sum_probs=149.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcce-eEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEV-AGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v-~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|||+|+|+ |.+|..++..++..|+. +|+++|+.+. ++...|+.+....... ..+..++|++ .+++||+||+++|
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~-~~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA-DTANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH-HhCCCCEEEEcCC
Confidence 59999999 99999999999999886 8999999652 3455566654321111 1122245764 5899999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe-hhhHHHHHHH
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRAKTF 184 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~-~lds~r~~~~ 184 (209)
.|++++++|.+++..|.++++++++++.+++|++++|++|||+| ++++++++.+|+|++|+||+| .|||+|++++
T Consensus 79 ~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~d----i~t~~~~~~sg~~~~rviG~g~~lds~R~~~~ 154 (305)
T TIGR01763 79 LPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLD----AMTYVAWQKSGFPKERVIGQAGVLDSARFRTF 154 (305)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHHCcCHHHEEEeccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 889999999999999999996 7999999999
Q ss_pred HHHHcCCCCCCeeEEEE--eccccccC
Q 028437 185 YAGKANVNVAGLLKLLT--HKNLVFIV 209 (209)
Q Consensus 185 la~~l~v~~~~v~~~~i--~g~~~~~~ 209 (209)
+|+++++++++|+++++ ||+++|++
T Consensus 155 la~~l~v~~~~v~~~v~GeHg~s~~~~ 181 (305)
T TIGR01763 155 IAMELGVSVQDVTACVLGGHGDAMVPL 181 (305)
T ss_pred HHHHhCcCHHHeeeeEEecCCCcEEee
Confidence 99999999999999988 88888863
No 29
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=4.1e-32 Score=232.96 Aligned_cols=173 Identities=36% Similarity=0.631 Sum_probs=149.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCc--ceeEeecCCchhhhcCCCCEEEEc
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRS--EVAGYMGNDQLGQALEDSDVVIIP 103 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~--~v~~~~~~~d~~~a~~~aD~Vi~~ 103 (209)
||||+|+|| |.+|++++..++..|+. +|+++|+++ .++...|+.+..... ..+ +..++|+ +++++||+||++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITGTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEeCCCH-HHHCCCCEEEEC
Confidence 479999999 99999999999999877 999999975 345566666653211 111 2224565 679999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe-hhhHHHHH
Q 028437 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRAK 182 (209)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~-~lds~r~~ 182 (209)
+|.|++++++|.+.+.+|+++++++++.+++++|++++|++|||++ ++++++++.+++|++|++|+| .+|++|++
T Consensus 78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d----~~~~~~~~~s~~~~~~viG~gt~lds~r~~ 153 (307)
T PRK06223 78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVD----AMTYVALKESGFPKNRVIGMAGVLDSARFR 153 (307)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHhCCCcccEEEeCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999 888889999999999999996 79999999
Q ss_pred HHHHHHcCCCCCCeeEEEEe--cccccc
Q 028437 183 TFYAGKANVNVAGLLKLLTH--KNLVFI 208 (209)
Q Consensus 183 ~~la~~l~v~~~~v~~~~i~--g~~~~~ 208 (209)
++||+++++++++|+++++| |+++|+
T Consensus 154 ~~la~~l~v~~~~v~~~viGehg~s~~p 181 (307)
T PRK06223 154 TFIAEELNVSVKDVTAFVLGGHGDSMVP 181 (307)
T ss_pred HHHHHHhCcChhhCcccEEcCCCCcceE
Confidence 99999999999999999994 556654
No 30
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=5.1e-32 Score=232.69 Aligned_cols=175 Identities=30% Similarity=0.464 Sum_probs=152.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC----chhHHHhhcCCCCC--cceeEeecCCchhhhcCCCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN----TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~----~~~~~~dl~~~~~~--~~v~~~~~~~d~~~a~~~aD~Vi~ 102 (209)
|||+|+||+|.+|++++..|+..|+.++|+++|+++ +.+...|+.+.... ...+ +..+.| ++++++||+||+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~-i~~~~d-~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE-IKISSD-LSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE-EEECCC-HHHhCCCCEEEE
Confidence 699999999999999999999999988999999953 35566777765321 1122 222346 467999999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHH
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRA 181 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~ 181 (209)
++|.|++++++|.+++..|+++++++++.+.+++|++++|+++||++ ++++++++.+++|++|+||+ |.||++|+
T Consensus 79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd----~~t~~~~~~~g~~~~~viG~gt~LDs~R~ 154 (309)
T cd05294 79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVD----VMTYKALKESGFDKNRVFGLGTHLDSLRF 154 (309)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHHHhcCCCHHHEeeccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999 77888888888999999999 57999999
Q ss_pred HHHHHHHcCCCCCCeeEEEE--eccccccC
Q 028437 182 KTFYAGKANVNVAGLLKLLT--HKNLVFIV 209 (209)
Q Consensus 182 ~~~la~~l~v~~~~v~~~~i--~g~~~~~~ 209 (209)
+++||+++++++++|+++++ ||+++|++
T Consensus 155 ~~~la~~l~v~~~~v~~~viGeHg~s~~~~ 184 (309)
T cd05294 155 KVAIAKHFNVHISEVHTRIIGEHGDSMVPL 184 (309)
T ss_pred HHHHHHHHCcChHHeEEEEEecCCCceEee
Confidence 99999999999999999999 88888763
No 31
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.2e-31 Score=230.28 Aligned_cols=173 Identities=32% Similarity=0.462 Sum_probs=153.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCC-cceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~-~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|||+|+|+ |.+|.+++..|+..|+..+|+++|+++ ..+.+.|+.+.... ...... +.++ +++++||+||+++|
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~ 76 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG 76 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence 59999999 999999999999999877999999975 45677888877421 122222 3454 77999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHHHHH
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTF 184 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~~~~ 184 (209)
.+++++++|.+++..|+++++++++.+++++|++++++++||++ ++++++++.++||++|+||+ |.||++|++++
T Consensus 77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d----~~~~~~~~~sg~p~~~viG~gt~LDs~R~~~~ 152 (308)
T cd05292 77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVD----VLTYVAYKLSGLPPNRVIGSGTVLDTARFRYL 152 (308)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHHCcCHHHeecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999 78888899899999999999 78999999999
Q ss_pred HHHHcCCCCCCeeEEEE--eccccccC
Q 028437 185 YAGKANVNVAGLLKLLT--HKNLVFIV 209 (209)
Q Consensus 185 la~~l~v~~~~v~~~~i--~g~~~~~~ 209 (209)
+|+++++++++|+++|+ ||+++|++
T Consensus 153 la~~~~v~~~~v~~~viGeHg~~~~~~ 179 (308)
T cd05292 153 LGEHLGVDPRSVHAYIIGEHGDSEVAV 179 (308)
T ss_pred HHHHhCCCccceeceeeccCCCcEEec
Confidence 99999999999999988 77888764
No 32
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=99.97 E-value=1.2e-30 Score=223.41 Aligned_cols=170 Identities=36% Similarity=0.616 Sum_probs=145.8
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCC--cceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~--~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
|+|+|| |.+|+.++..++..++. +|+++|+++. .+...|+.+.... ...+ +..++| ++++++||+||+++|.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t~d-~~~l~dADiVIit~g~ 76 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGTND-YEDIAGSDVVVITAGI 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEcCC-HHHhCCCCEEEEecCC
Confidence 689999 99999999999999887 9999999863 3445566654321 1112 222356 4679999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe-hhhHHHHHHHH
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT-TLDVVRAKTFY 185 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~-~lds~r~~~~l 185 (209)
|++++++|.+.+..|+++++++++.+++++|++++|++|||++ ++++++++++++|++|++|+| .+|++|+++++
T Consensus 77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~d----i~t~~~~~~s~~~~~rviGlgt~lds~r~~~~l 152 (300)
T cd01339 77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLD----VMTYVAYKASGFPRNRVIGMAGVLDSARFRYFI 152 (300)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHHHHHhCCCHHHEEEecchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 888889999999999999997 79999999999
Q ss_pred HHHcCCCCCCeeEEEE--ecccccc
Q 028437 186 AGKANVNVAGLLKLLT--HKNLVFI 208 (209)
Q Consensus 186 a~~l~v~~~~v~~~~i--~g~~~~~ 208 (209)
|+++++++++|+++++ ||+++|+
T Consensus 153 a~~l~v~~~~v~~~v~G~hg~~~~~ 177 (300)
T cd01339 153 AEELGVSVKDVQAMVLGGHGDTMVP 177 (300)
T ss_pred HHHhCCCccceEEEEEeCCCCccee
Confidence 9999999999999999 5556654
No 33
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=99.97 E-value=1.5e-30 Score=199.83 Aligned_cols=139 Identities=42% Similarity=0.654 Sum_probs=123.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
|||+|+||+|.||++++..|++.++.+||+|+|+++ .++.++|+.|............. +.++++++||+||+++|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~~~~~aDivvitag~ 79 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYEALKDADIVVITAGV 79 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGGGGTTESEEEETTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-ccccccccccEEEEeccc
Confidence 699999999999999999999999999999999984 57788999998654322222222 347999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEE
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFG 172 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig 172 (209)
++++|++|.+++..|.++++++++++++++|+++++++|||+| ++++++++.+++|++|+||
T Consensus 80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd----~~t~~~~~~s~~~~~kviG 141 (141)
T PF00056_consen 80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVD----VMTYVAQKYSGFPPNKVIG 141 (141)
T ss_dssp SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHH----HHHHHHHHHHTSSGGGEEE
T ss_pred cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHH----HHHHHHHHhhCcCcccCcC
Confidence 9999999999999999999999999999999999999999999 8899999999999999998
No 34
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=99.97 E-value=2e-30 Score=210.36 Aligned_cols=179 Identities=30% Similarity=0.382 Sum_probs=156.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCc-----cEEEEEecCC----chhHHHhhcCCCCCcceeEeecCCchhhhcC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLV-----SRLALYDIAN----TPGVAADVGHINTRSEVAGYMGNDQLGQALE 95 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~-----~ev~l~D~~~----~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~ 95 (209)
|+++.+|+|+||+|.||++++..+++...+ -.++|+|+.+ +.+..++|+++.++. +..+..++|..++|+
T Consensus 1 ~~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~Pl-L~~Vvattd~~~afk 79 (332)
T KOG1496|consen 1 MKEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPL-LKGVVATTDEVEAFK 79 (332)
T ss_pred CCCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhH-HHhhhcccChhhhhc
Confidence 567889999999999999999998865332 2789999975 467789999997653 333333567889999
Q ss_pred CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEe
Q 028437 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVT 174 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~ 174 (209)
+.|+.|...+.|+++||+|.|++..|+++++.-..++++|+ |++++++++||+++++.++.++ ++++|++++.++|
T Consensus 80 dv~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~k~---ApsIP~kNfs~lT 156 (332)
T KOG1496|consen 80 DVDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILKKF---APSIPEKNFSALT 156 (332)
T ss_pred cCcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHhhh---CCCCchhcchhhh
Confidence 99999999999999999999999999999999999999998 8999999999999988765444 6789999999999
Q ss_pred hhhHHHHHHHHHHHcCCCCCCeeEEEEeccccc
Q 028437 175 TLDVVRAKTFYAGKANVNVAGLLKLLTHKNLVF 207 (209)
Q Consensus 175 ~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~~ 207 (209)
.||.+|+..+||.++||+.++|++++||||++.
T Consensus 157 RLDhNRA~~QlA~klgv~~~~VkNviIWGNHSs 189 (332)
T KOG1496|consen 157 RLDHNRALAQLALKLGVPVSDVKNVIIWGNHSS 189 (332)
T ss_pred hhchhhHHHHHHHhhCCchhhcceeEEeccccc
Confidence 999999999999999999999999999999864
No 35
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=99.96 E-value=3.5e-28 Score=208.76 Aligned_cols=144 Identities=28% Similarity=0.318 Sum_probs=126.0
Q ss_pred EEEEEecCC----chhHHHhhcCCCCC-cceeEeecCCchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHH
Q 028437 56 RLALYDIAN----TPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCS 130 (209)
Q Consensus 56 ev~l~D~~~----~~~~~~dl~~~~~~-~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~ 130 (209)
.++|+|+++ ++++++|+.|..+. ...... +++++++++|||+||++||.|+++|++|.+++..|+++++++++
T Consensus 17 ~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~--~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~ 94 (313)
T TIGR01756 17 CLHLLEIPPALNRLEALAMELEDCAFPNLAGTIV--TTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGE 94 (313)
T ss_pred EEEEecCCCccchhHhHHHHHHHhccccCCceEe--cCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence 899999965 46789999998722 112222 35667899999999999999999999999999999999999999
Q ss_pred HHHhhCC-CeEEEEecCCCCCcHHHHHHHH-HHhCCCCCCcEEEE-ehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 131 AIAKYCP-NAIVNMISNPVNSTVPIAAEVF-KKAGTYNEKKLFGV-TTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 131 ~i~~~~p-~~~viv~snP~~~~~~i~~~~~-~~~~~~p~~~vig~-~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
++++++| ++++|++|||+| ++++++ ++.++||++ +||+ |.||++|++++||++++++|++|++++||||++
T Consensus 95 ~i~~~a~~~~ivivvtNPvD----v~t~v~~~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG 168 (313)
T TIGR01756 95 ALSEYAKPTVKVLVIGNPVN----TNCLVAMLHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHA 168 (313)
T ss_pred HHHhhCCCCeEEEEeCCchH----HHHHHHHHHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCC
Confidence 9999995 588999999999 788888 689999998 9999 789999999999999999999999998877764
No 36
>PLN00135 malate dehydrogenase
Probab=99.95 E-value=9e-28 Score=205.79 Aligned_cols=143 Identities=26% Similarity=0.345 Sum_probs=124.2
Q ss_pred EEEEEecCC----chhHHHhhcCCCCC--cceeEeecCCchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHH
Q 028437 56 RLALYDIAN----TPGVAADVGHINTR--SEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLC 129 (209)
Q Consensus 56 ev~l~D~~~----~~~~~~dl~~~~~~--~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~ 129 (209)
.++|+|+++ ++++++|+.|...+ ..+. .+++.++++++||+||++||.++++|++|.+++..|++++++++
T Consensus 15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~---~~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~ 91 (309)
T PLN00135 15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVV---ATTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA 91 (309)
T ss_pred EEEEecCcccccchhhHHHHHHhhhHHhcCCcE---ecCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 899999865 46788999998632 1222 13454699999999999999999999999999999999999999
Q ss_pred HHHHhh-CCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE-ehhhHHHHHHHHHHHcCCCCCCeeEEEEeccc
Q 028437 130 SAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV-TTLDVVRAKTFYAGKANVNVAGLLKLLTHKNL 205 (209)
Q Consensus 130 ~~i~~~-~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~-~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~ 205 (209)
+.+.++ +|++++|++|||+| ++++++++.+++|++|+||+ |.||++|++++||+++++++++|+..+||||+
T Consensus 92 ~~i~~~~~p~aivivvsNPvD----v~t~~~~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeH 165 (309)
T PLN00135 92 SALEKHAAPDCKVLVVANPAN----TNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNH 165 (309)
T ss_pred HHHHHhcCCCeEEEEeCCcHH----HHHHHHHHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcC
Confidence 999996 89999999999999 88888999999999999999 78999999999999999999999655554444
No 37
>PRK15076 alpha-galactosidase; Provisional
Probab=99.89 E-value=1.3e-22 Score=181.25 Aligned_cols=165 Identities=20% Similarity=0.237 Sum_probs=125.7
Q ss_pred CCeEEEEcCCCchHHHHHH--HHH-hCCCc-cEEEEEecCCchhH-HHh-hcCC----CCCcceeEeecCCchhhhcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLAL--LMK-LNPLV-SRLALYDIANTPGV-AAD-VGHI----NTRSEVAGYMGNDQLGQALEDS 97 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~--~L~-~~g~~-~ev~l~D~~~~~~~-~~d-l~~~----~~~~~v~~~~~~~d~~~a~~~a 97 (209)
|+||+|+|| |.+|.+.+. .++ ..++. .+|+|+|+++.... ... +.+. ....++. .++|++++++||
T Consensus 1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l~~~~~~~~~~~~~i~---~ttD~~eal~dA 76 (431)
T PRK15076 1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIVARKLAESLGASAKIT---ATTDRREALQGA 76 (431)
T ss_pred CcEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE---EECCHHHHhCCC
Confidence 369999999 999988765 555 34443 39999999862211 111 1111 1122333 256888999999
Q ss_pred CEEEEcCCCC-CCCC--------------CChhHH--------HHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHH
Q 028437 98 DVVIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPI 154 (209)
Q Consensus 98 D~Vi~~ag~~-~~~g--------------~~r~~~--------~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i 154 (209)
|+||++++++ .+++ +++.+. ..+|++.++++++.|+++||++|+|++|||++ +
T Consensus 77 DfVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~d----i 152 (431)
T PRK15076 77 DYVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMA----M 152 (431)
T ss_pred CEEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHH----H
Confidence 9999999886 3333 334455 89999999999999999999999999999999 8
Q ss_pred HHHHHHHhCCCCCCcEEEEeh--hhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 155 AAEVFKKAGTYNEKKLFGVTT--LDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 155 ~~~~~~~~~~~p~~~vig~~~--lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
+++.++ ++|+.|+||+|+ +++. +.+|+.+|+++++|+.++.+=|+.
T Consensus 153 vt~~~~---~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH~ 200 (431)
T PRK15076 153 NTWAMN---RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINHM 200 (431)
T ss_pred HHHHHh---cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecch
Confidence 888887 478899999983 6764 889999999999999999866653
No 38
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.87 E-value=2e-21 Score=172.95 Aligned_cols=166 Identities=17% Similarity=0.177 Sum_probs=126.3
Q ss_pred CeEEEEcCCCchHH-HHHHHHHhC-C-C-ccEEEEEecC-Cchh-----HHHhhcCCCCCcceeEeecCCchhhhcCCCC
Q 028437 29 RKVAVLGAAGGIGQ-PLALLMKLN-P-L-VSRLALYDIA-NTPG-----VAADVGHINTRSEVAGYMGNDQLGQALEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~-~la~~L~~~-g-~-~~ev~l~D~~-~~~~-----~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD 98 (209)
|||+|+|| |+.-. .+...|++. . + .++|+|+|+| +.+- .+..+.... ...++.. .++|+++|++|||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~-~t~d~~~al~gad 77 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVH-LTTDRREALEGAD 77 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCC
Confidence 69999999 77633 356666653 2 3 5799999999 4211 111222211 1122322 2568999999999
Q ss_pred EEEEcCCCCCCCCCChhH--------------------HHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHH
Q 028437 99 VVIIPAGVPRKPGMTRDD--------------------LFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEV 158 (209)
Q Consensus 99 ~Vi~~ag~~~~~g~~r~~--------------------~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~ 158 (209)
+||++++++..+++++.+ +..+|+++++++++.++++||++|+|++|||++ +++++
T Consensus 78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~----ivt~a 153 (419)
T cd05296 78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAG----IVTEA 153 (419)
T ss_pred EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHH----HHHHH
Confidence 999998876655443332 367899999999999999999999999999999 88999
Q ss_pred HHHhCCCCCCcEEEEehhhHHHHHHHHHHHcCCCCCCeeEEEEeccc
Q 028437 159 FKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAGLLKLLTHKNL 205 (209)
Q Consensus 159 ~~~~~~~p~~~vig~~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~ 205 (209)
+++.+ +.|+||+|+. +.|+++++|+.+|+++++|+.++++=|+
T Consensus 154 ~~k~~---~~rviGlc~~-~~r~~~~ia~~lg~~~~~v~~~v~GlNH 196 (419)
T cd05296 154 VLRHT---GDRVIGLCNV-PIGLQRRIAELLGVDPEDVFIDYAGLNH 196 (419)
T ss_pred HHHhc---cCCEEeeCCc-HHHHHHHHHHHhCCCHHHceEEEEeccc
Confidence 98875 7899999987 4799999999999999999999986455
No 39
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.87 E-value=5.9e-21 Score=170.27 Aligned_cols=168 Identities=20% Similarity=0.168 Sum_probs=124.9
Q ss_pred CeEEEEcCCCch-HHHHHHHHHhCC--C-ccEEEEEecCCch-h----HHHhhcCCCCCcceeEeecCCchhhhcCCCCE
Q 028437 29 RKVAVLGAAGGI-GQPLALLMKLNP--L-VSRLALYDIANTP-G----VAADVGHINTRSEVAGYMGNDQLGQALEDSDV 99 (209)
Q Consensus 29 ~kI~IiGasG~v-G~~la~~L~~~g--~-~~ev~l~D~~~~~-~----~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~ 99 (209)
|||+|+|| |+. ...++..|+... + .++|+|+|+|+.. . .+..+.+.. ...++. ..|+|+++|++||||
T Consensus 1 ~KI~iIGg-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~-g~~~~v-~~ttD~~~Al~gADf 77 (425)
T cd05197 1 VKIAIIGG-GSSFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEV-GADIKF-EKTMDLEDAIIDADF 77 (425)
T ss_pred CEEEEECC-chHhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhh-CCCeEE-EEeCCHHHHhCCCCE
Confidence 69999999 765 223566666543 3 5799999998621 1 112222211 112332 225789999999999
Q ss_pred EEEcCCCCC------------CCCC--------ChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHH
Q 028437 100 VIIPAGVPR------------KPGM--------TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVF 159 (209)
Q Consensus 100 Vi~~ag~~~------------~~g~--------~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~ 159 (209)
||.+..+.. +.|. -...+..+|+++++++++.|+++||++|+|++|||++ ++|+++
T Consensus 78 Vi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~d----i~t~a~ 153 (425)
T cd05197 78 VINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAG----EVTEAV 153 (425)
T ss_pred EEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHH----HHHHHH
Confidence 999954321 2221 1233457899999999999999999999999999999 889999
Q ss_pred HHhCCCCCCcEEEEehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 160 KKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 160 ~~~~~~p~~~vig~~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
++. +|+.|+||+|.. +.|+++.+|+.+|+++++|+.++++=|++
T Consensus 154 ~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg 197 (425)
T cd05197 154 RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHG 197 (425)
T ss_pred HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCe
Confidence 887 478899999987 89999999999999999999888753553
No 40
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.83 E-value=1.4e-19 Score=161.82 Aligned_cols=166 Identities=19% Similarity=0.142 Sum_probs=126.3
Q ss_pred CeEEEEcCCCchHHHHHH--HHHhC-CC-ccEEEEEecCCc--hhHHHhhcCC----CCCcceeEeecCCchhhhcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLAL--LMKLN-PL-VSRLALYDIANT--PGVAADVGHI----NTRSEVAGYMGNDQLGQALEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~--~L~~~-g~-~~ev~l~D~~~~--~~~~~dl~~~----~~~~~v~~~~~~~d~~~a~~~aD 98 (209)
+||+|+|| |.+|++++. .++.. .. ..+|+|+|+++. .....++.+. ....++. .++|+++++++||
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~---~ttD~~eal~~AD 76 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE---ATTDRREALDGAD 76 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE---EeCCHHHHhcCCC
Confidence 58999999 999998765 44422 22 129999999862 2222222211 1122333 2568889999999
Q ss_pred EEEEcCCCCCCCCCCh----------------------hHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHH
Q 028437 99 VVIIPAGVPRKPGMTR----------------------DDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAA 156 (209)
Q Consensus 99 ~Vi~~ag~~~~~g~~r----------------------~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~ 156 (209)
+||++++....++.++ .....+|.+.+.++++.++++||+++++++|||++ +++
T Consensus 77 ~Vi~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~----i~t 152 (423)
T cd05297 77 FVINTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMA----ELT 152 (423)
T ss_pred EEEEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHH----HHH
Confidence 9999987654443322 23456789999999999999999999999999999 889
Q ss_pred HHHHHhCCCCCCcEEEEehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 157 EVFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 157 ~~~~~~~~~p~~~vig~~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
+++++.++ .|++|+|+. +.++++.+|+.+++++++|+.++++=|+.
T Consensus 153 ~~~~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~ 198 (423)
T cd05297 153 WALNRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHM 198 (423)
T ss_pred HHHHHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccH
Confidence 99988764 799999975 77899999999999999999999976664
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.82 E-value=3.6e-19 Score=159.20 Aligned_cols=168 Identities=20% Similarity=0.217 Sum_probs=123.3
Q ss_pred CeEEEEcCCCch-HHHHHHHHHhC--CC-ccEEEEEecCCch-h----HHHhhcCCCCCcceeEeecCCchhhhcCCCCE
Q 028437 29 RKVAVLGAAGGI-GQPLALLMKLN--PL-VSRLALYDIANTP-G----VAADVGHINTRSEVAGYMGNDQLGQALEDSDV 99 (209)
Q Consensus 29 ~kI~IiGasG~v-G~~la~~L~~~--g~-~~ev~l~D~~~~~-~----~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~ 99 (209)
|||+|||| |+. +..++..|++. .+ .++|+|+|+|+.. . .+..+.... ...++.. .|+|+++|++|||+
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~-g~~~~v~-~Ttdr~eAl~gADf 77 (437)
T cd05298 1 FKIVIAGG-GSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKEN-YPEIKFV-YTTDPEEAFTDADF 77 (437)
T ss_pred CeEEEECC-cHHHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EECCHHHHhCCCCE
Confidence 69999999 765 22356666655 23 5799999998621 1 122222211 1123322 25789999999999
Q ss_pred EEEcCCCCC------------CCCC---C-----hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHH
Q 028437 100 VIIPAGVPR------------KPGM---T-----RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVF 159 (209)
Q Consensus 100 Vi~~ag~~~------------~~g~---~-----r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~ 159 (209)
||.+..+.. +.|. + ..-+..+|++.+.++++.++++||++|+|++|||++ ++++++
T Consensus 78 Vi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~----~vt~~~ 153 (437)
T cd05298 78 VFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAA----IVAEAL 153 (437)
T ss_pred EEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHH----HHHHHH
Confidence 999964432 1221 1 223567999999999999999999999999999999 888898
Q ss_pred HHhCCCCCCcEEEEehhhHHHHHHHHHHHcCCCCCCeeEEEEecccc
Q 028437 160 KKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNVAGLLKLLTHKNLV 206 (209)
Q Consensus 160 ~~~~~~p~~~vig~~~lds~r~~~~la~~l~v~~~~v~~~~i~g~~~ 206 (209)
++. +|..|++|+|+.... ++..+|+.+|+++++++..+.+=|+.
T Consensus 154 ~~~--~~~~kviGlC~~~~~-~~~~la~~lg~~~~~v~~~~~GlNH~ 197 (437)
T cd05298 154 RRL--FPNARILNICDMPIA-IMDSMAAILGLDRKDLEPDYFGLNHF 197 (437)
T ss_pred HHH--CCCCCEEEECCcHHH-HHHHHHHHhCCCHHHceEEEEeecch
Confidence 876 788999999985443 67889999999999999888766653
No 42
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.81 E-value=6.1e-19 Score=140.21 Aligned_cols=151 Identities=23% Similarity=0.263 Sum_probs=103.2
Q ss_pred eEEEEcCCCchHHHH--HHHHHhCC-C-ccEEEEEecCCch-----hHHHhhcCC-CCCcceeEeecCCchhhhcCCCCE
Q 028437 30 KVAVLGAAGGIGQPL--ALLMKLNP-L-VSRLALYDIANTP-----GVAADVGHI-NTRSEVAGYMGNDQLGQALEDSDV 99 (209)
Q Consensus 30 kI~IiGasG~vG~~l--a~~L~~~g-~-~~ev~l~D~~~~~-----~~~~dl~~~-~~~~~v~~~~~~~d~~~a~~~aD~ 99 (209)
||+|+|| |++-... ...+...+ + .++|+|+|+|+.+ ..+..+.+. ..+.++.. ++|+++|++|||+
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~~~~~~v~~---ttd~~eAl~gADf 76 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEAGADLKVEA---TTDRREALEGADF 76 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHCTTSSEEEE---ESSHHHHHTTESE
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcCCCeEEEE---eCCHHHHhCCCCE
Confidence 8999999 8876653 33444433 2 4599999998621 112222221 22333433 5789999999999
Q ss_pred EEEcCCC------------CCCCCCC----------hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHH
Q 028437 100 VIIPAGV------------PRKPGMT----------RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAE 157 (209)
Q Consensus 100 Vi~~ag~------------~~~~g~~----------r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~ 157 (209)
||++..+ |.+.|.. ......++++.+.++++.++++||++|++++|||+. ++++
T Consensus 77 Vi~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~----~vt~ 152 (183)
T PF02056_consen 77 VINQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMG----IVTE 152 (183)
T ss_dssp EEE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHH----HHHH
T ss_pred EEEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHH----HHHH
Confidence 9999654 2233321 223467899999999999999999999999999999 8888
Q ss_pred HHHHhCCCCCCcEEEEehhhHHHHHHHHHHHcCC
Q 028437 158 VFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANV 191 (209)
Q Consensus 158 ~~~~~~~~p~~~vig~~~lds~r~~~~la~~l~v 191 (209)
++.+. +|..|++|+|+... -....+|+.||.
T Consensus 153 a~~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 153 ALSRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp HHHHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred HHHHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 88876 46689999998654 367889998874
No 43
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.6e-17 Score=146.68 Aligned_cols=168 Identities=23% Similarity=0.254 Sum_probs=120.1
Q ss_pred CCCeEEEEcCCCchHHHH--HHHHHhCC-C-ccEEEEEecCCchh-----HHHhhcC-CCCCcceeEeecCCchhhhcCC
Q 028437 27 PDRKVAVLGAAGGIGQPL--ALLMKLNP-L-VSRLALYDIANTPG-----VAADVGH-INTRSEVAGYMGNDQLGQALED 96 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~l--a~~L~~~g-~-~~ev~l~D~~~~~~-----~~~dl~~-~~~~~~v~~~~~~~d~~~a~~~ 96 (209)
+.+||++||| |+.+... ...|.+.. + ..+|.|+|+++... .+..+.+ ...+.++.. ++|+++|++|
T Consensus 2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~g~~~kv~~---ttd~~eAl~g 77 (442)
T COG1486 2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEAGAPVKVEA---TTDRREALEG 77 (442)
T ss_pred CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhhCCCeEEEE---ecCHHHHhcC
Confidence 3469999999 9888773 23344332 3 46999999986321 1122222 222323332 5689999999
Q ss_pred CCEEEEcCCCC------------CCCCCC--------hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHH
Q 028437 97 SDVVIIPAGVP------------RKPGMT--------RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAA 156 (209)
Q Consensus 97 aD~Vi~~ag~~------------~~~g~~--------r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~ 156 (209)
||||+.+..+. .+.|.. ..-...++++.+.++++.|+++||++|++++|||++ ++|
T Consensus 78 AdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~----~vT 153 (442)
T COG1486 78 ADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAA----IVT 153 (442)
T ss_pred CCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHH----HHH
Confidence 99999996432 222211 112346899999999999999999999999999999 888
Q ss_pred HHHHHhCCCCCCcEEEEehhhHHHHHHHHHHHcCCCC-CCeeEEEEeccc
Q 028437 157 EVFKKAGTYNEKKLFGVTTLDVVRAKTFYAGKANVNV-AGLLKLLTHKNL 205 (209)
Q Consensus 157 ~~~~~~~~~p~~~vig~~~lds~r~~~~la~~l~v~~-~~v~~~~i~g~~ 205 (209)
++..+. +|..|++|+|+.... ....+|+.|++++ ++++.-+-+=|+
T Consensus 154 eAv~r~--~~~~K~VGlCh~~~g-~~~~lAe~L~~~~~~~l~~~~aGlNH 200 (442)
T COG1486 154 EAVRRL--YPKIKIVGLCHGPIG-IAMELAEVLGLEPREDLRYRVAGLNH 200 (442)
T ss_pred HHHHHh--CCCCcEEeeCCchHH-HHHHHHHHhCCCchhceeEEEeechh
Confidence 898886 464599999986443 6788999999975 999877665454
No 44
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.22 E-value=7.7e-11 Score=100.16 Aligned_cols=115 Identities=17% Similarity=0.198 Sum_probs=79.6
Q ss_pred EEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCC-cceeEeecCCchhhhcCCCCEEEEcCCCCCCC
Q 028437 32 AVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTR-SEVAGYMGNDQLGQALEDSDVVIIPAGVPRKP 110 (209)
Q Consensus 32 ~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~-~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~~~ 110 (209)
+||||+||+|++++..|+++|...+|..+|+.+......++...... ....+++..+++++++++||+|||+|+.....
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 48999999999999999999954599999986532221122222111 01111223457889999999999998765433
Q ss_pred C-CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 028437 111 G-MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 111 g-~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP 147 (209)
+ .+..+++..|+..++++++++.+.+.. ++|+.|..
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vk-rlVytSS~ 117 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVK-RLVYTSSI 117 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcCc
Confidence 4 456778999999999999999986533 45555543
No 45
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.20 E-value=2.2e-10 Score=98.44 Aligned_cols=118 Identities=16% Similarity=0.080 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh----HHHhhcCCCCCc--ceeEeecCCchhhhcCCCCEE
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG----VAADVGHINTRS--EVAGYMGNDQLGQALEDSDVV 100 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~----~~~dl~~~~~~~--~v~~~~~~~d~~~a~~~aD~V 100 (209)
..++|+|+||+||||+.++..|+++|| +|+..-|++... ...+|....-.. ...++...+.+.+|++|||.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence 457999999999999999999999999 999998876321 233344222110 111122345688999999999
Q ss_pred EEcCCCCCCCCC-ChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 028437 101 IIPAGVPRKPGM-TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 101 i~~ag~~~~~g~-~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP 147 (209)
||+|........ ...+++.-+++++.++++++.+.. ..+-+++|+.
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS 129 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSS 129 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEecc
Confidence 999876543332 244788999999999999999976 4444455544
No 46
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.15 E-value=7.2e-10 Score=99.74 Aligned_cols=114 Identities=13% Similarity=-0.018 Sum_probs=78.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEE
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVII 102 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~ 102 (209)
-.+.|||+||||+||||++|+..|+.+|+ +|+.+|+... ......+... ..++.+. .+-+++++.++|+|||
T Consensus 117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~~~~~~~~~~~~~---~~~~~~~-~Di~~~~~~~~D~ViH 190 (436)
T PLN02166 117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFTGRKENLVHLFGN---PRFELIR-HDVVEPILLEVDQIYH 190 (436)
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCccHhHhhhhccC---CceEEEE-CccccccccCCCEEEE
Confidence 44568999999999999999999999999 9999998531 1111111111 1222221 1123455789999999
Q ss_pred cCCCCC--CCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 103 PAGVPR--KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~--~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+|+... ....+..+++..|+..+.++++++++.+ .++|++|.
T Consensus 191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS 234 (436)
T PLN02166 191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTST 234 (436)
T ss_pred CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECc
Confidence 997542 1223456778899999999999999875 36776653
No 47
>PLN02427 UDP-apiose/xylose synthase
Probab=99.10 E-value=7.8e-10 Score=97.53 Aligned_cols=116 Identities=14% Similarity=0.080 Sum_probs=77.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEecCCchhHHHhhcCC---CCCcceeEe----ecCCchhhhcCC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTPGVAADVGHI---NTRSEVAGY----MGNDQLGQALED 96 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~-g~~~ev~l~D~~~~~~~~~dl~~~---~~~~~v~~~----~~~~d~~~a~~~ 96 (209)
..++|||+||||+||+|++++..|+++ ++ +|+.+|+.... ...+... .....++.+ ....++++++++
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~--~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 86 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDK--IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM 86 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchh--hhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc
Confidence 345579999999999999999999998 57 99999975321 1111111 001112221 112346678889
Q ss_pred CCEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+|+|||+|+..... ..+..+.+..|+..+.++++++++.. .++|++|.
T Consensus 87 ~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS 136 (386)
T PLN02427 87 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 136 (386)
T ss_pred CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence 99999999864321 12334556789999999999998754 46777764
No 48
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.09 E-value=8.7e-10 Score=94.81 Aligned_cols=109 Identities=11% Similarity=-0.018 Sum_probs=75.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhhcCCCCEEEEcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
|||+|+||||++|++++..|++.|+ +|+.++|+.... ..+...... .+. ++...++++++++++|+||++++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~v~-~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWGAE-LVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcCCE-EEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 5999999999999999999999999 999999864221 111111111 011 1112345778899999999987643
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 108 ~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
. .+..++...|.....++++++++.+.. ++|.+|.
T Consensus 76 ~---~~~~~~~~~~~~~~~~l~~aa~~~gvk-r~I~~Ss 110 (317)
T CHL00194 76 P---SDLYNAKQIDWDGKLALIEAAKAAKIK-RFIFFSI 110 (317)
T ss_pred C---CCccchhhhhHHHHHHHHHHHHHcCCC-EEEEecc
Confidence 2 122345677889999999999886543 6666664
No 49
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.08 E-value=1.9e-09 Score=93.97 Aligned_cols=116 Identities=16% Similarity=0.026 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCC---CCCcceeEee----cCCchhhhcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHI---NTRSEVAGYM----GNDQLGQALEDS 97 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~---~~~~~v~~~~----~~~d~~~a~~~a 97 (209)
.++||+|+||+||+|++|+..|+.+|+ +|+.+|+... .....++... .....+..+. ...++++.++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 346999999999999999999999998 9999998531 1111111100 0001111111 112355668899
Q ss_pred CEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 98 DVVIIPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 98 D~Vi~~ag~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
|+|||+|+....+ ..+..++...|+..+.++++.+++.... +++++|
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~v~~S 140 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAA 140 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEee
Confidence 9999999864322 1345567889999999999999886433 566665
No 50
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.07 E-value=2.3e-09 Score=96.67 Aligned_cols=121 Identities=13% Similarity=-0.042 Sum_probs=80.0
Q ss_pred cccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEeecCCchhhhcC
Q 028437 18 ARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYMGNDQLGQALE 95 (209)
Q Consensus 18 ~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~ 95 (209)
++.-+-...+.|||+|+||+||||++|+..|+++|+ +|+.+|+... .......... .+++.+.. +-+.+++.
T Consensus 109 ~~~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~~~~~~~~~~~---~~~~~i~~-D~~~~~l~ 182 (442)
T PLN02206 109 GKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGRKENVMHHFSN---PNFELIRH-DVVEPILL 182 (442)
T ss_pred CcCccccccCCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhhhhccC---CceEEEEC-CccChhhc
Confidence 333333334558999999999999999999999999 9999987521 1111111110 12222211 12345677
Q ss_pred CCCEEEEcCCCCCC--CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~--~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
++|+|||+|+.... ...+..+++..|+..+.++++++++.. .++|++|.
T Consensus 183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~SS 233 (442)
T PLN02206 183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTST 233 (442)
T ss_pred CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECC
Confidence 89999999975431 123456778899999999999998764 36776654
No 51
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=99.07 E-value=2.3e-09 Score=91.84 Aligned_cols=149 Identities=21% Similarity=0.275 Sum_probs=100.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hh------HHHhhcCCC------CCcceeEeecCCchhh
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PG------VAADVGHIN------TRSEVAGYMGNDQLGQ 92 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~------~~~dl~~~~------~~~~v~~~~~~~d~~~ 92 (209)
.+||+|+|| |.+|+.++..++..|+ +|+++|+++. .+ ....+.... ....+..+..++++ +
T Consensus 3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~ 78 (307)
T COG1250 3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A 78 (307)
T ss_pred ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence 469999999 9999999999999779 9999999741 11 111111111 11112222224455 4
Q ss_pred hcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEE
Q 028437 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLF 171 (209)
Q Consensus 93 a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vi 171 (209)
++++||+||.++ .+|.++.+++.+.+.+++ |++ |+.||.+.. .++++.... ..|+|++
T Consensus 79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl---~it~ia~~~--~rper~i 137 (307)
T COG1250 79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSL---SITELAEAL--KRPERFI 137 (307)
T ss_pred HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCC---CHHHHHHHh--CCchhEE
Confidence 899999999984 578899999999999998 565 469999986 445554443 3567888
Q ss_pred EEe-------------------hhhHHHHHHHHHHHcCCCC---CCeeEEEE
Q 028437 172 GVT-------------------TLDVVRAKTFYAGKANVNV---AGLLKLLT 201 (209)
Q Consensus 172 g~~-------------------~lds~r~~~~la~~l~v~~---~~v~~~~i 201 (209)
|++ .-++...-..+++.+|..| .|+.+||+
T Consensus 138 G~HFfNP~~~m~LVEvI~g~~T~~e~~~~~~~~~~~igK~~vv~~D~pGFi~ 189 (307)
T COG1250 138 GLHFFNPVPLMPLVEVIRGEKTSDETVERVVEFAKKIGKTPVVVKDVPGFIV 189 (307)
T ss_pred EEeccCCCCcceeEEEecCCCCCHHHHHHHHHHHHHcCCCCEeecCCCceeh
Confidence 884 1255555567778887543 55555553
No 52
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=99.07 E-value=3e-09 Score=93.02 Aligned_cols=113 Identities=20% Similarity=0.262 Sum_probs=80.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHH-------------HhhcCCC-CCcceeEeecCCchhhhc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVA-------------ADVGHIN-TRSEVAGYMGNDQLGQAL 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~-------------~dl~~~~-~~~~v~~~~~~~d~~~a~ 94 (209)
|||+|+|. |+||...+..|++.|| +|+++|+++.+-.. .++.... ...++.. |+|.++++
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f---Ttd~~~a~ 74 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF---TTDYEEAV 74 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE---EcCHHHHH
Confidence 79999998 9999999999999999 99999998532111 1111111 1123433 67899999
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEe--cCCCCCcHH
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI--SNPVNSTVP 153 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~--snP~~~~~~ 153 (209)
+++|++|++.|.|.++.. ..++..+...++.+.++.+...+++. |-|++++-.
T Consensus 75 ~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~ 129 (414)
T COG1004 75 KDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEE 129 (414)
T ss_pred hcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHH
Confidence 999999999999986632 23457777888888877765334443 677776443
No 53
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=99.05 E-value=5.9e-10 Score=88.87 Aligned_cols=117 Identities=23% Similarity=0.376 Sum_probs=77.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch-----hHHHh----hcC-CCC--------CcceeEeecCCchh
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-----GVAAD----VGH-INT--------RSEVAGYMGNDQLG 91 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~-----~~~~d----l~~-~~~--------~~~v~~~~~~~d~~ 91 (209)
||+|+|| |.+|..++..++..|+ +|+++|+++.. ....+ +.. ... ..++.. ++|++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~ 74 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE 74 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence 7999999 9999999999999999 99999998521 11111 111 110 123333 45777
Q ss_pred hhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcE
Q 028437 92 QALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKL 170 (209)
Q Consensus 92 ~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~v 170 (209)
++. +||+||.+. .++++..+++...+++.+ |+++ ++||.+.. .++++....+ .|+|+
T Consensus 75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl---~i~~la~~~~--~p~R~ 132 (180)
T PF02737_consen 75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDTI--LASNTSSL---SISELAAALS--RPERF 132 (180)
T ss_dssp GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS----HHHHHTTSS--TGGGE
T ss_pred HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCce--EEecCCCC---CHHHHHhccC--cCceE
Confidence 666 999999995 456789999999999998 5654 58998875 4455554432 56788
Q ss_pred EEEe
Q 028437 171 FGVT 174 (209)
Q Consensus 171 ig~~ 174 (209)
+|++
T Consensus 133 ig~H 136 (180)
T PF02737_consen 133 IGMH 136 (180)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8874
No 54
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.04 E-value=3.7e-09 Score=90.42 Aligned_cols=116 Identities=13% Similarity=0.054 Sum_probs=76.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcCC-CCCcceeE----eecCCchhhhcCCCCEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHI-NTRSEVAG----YMGNDQLGQALEDSDVVI 101 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~~-~~~~~v~~----~~~~~d~~~a~~~aD~Vi 101 (209)
.++|+|+||+||+|++++..|+++|+ +|++++++.... ....+... .....+.. +....+++++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 36899999999999999999999999 999888864211 11111110 00011111 112335677889999999
Q ss_pred EcCCCCCCCCCCh-hHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 102 IPAGVPRKPGMTR-DDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 102 ~~ag~~~~~g~~r-~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
|+|+......... .+++..|+..+.++++++.+...-.++|++|
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~S 126 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTS 126 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEcc
Confidence 9998643221222 3677889999999999988752223566655
No 55
>PLN02650 dihydroflavonol-4-reductase
Probab=99.01 E-value=4.3e-09 Score=91.57 Aligned_cols=117 Identities=13% Similarity=0.029 Sum_probs=77.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcC-CCCCcceeE----eecCCchhhhcCCCCEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGH-INTRSEVAG----YMGNDQLGQALEDSDVVI 101 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~-~~~~~~v~~----~~~~~d~~~a~~~aD~Vi 101 (209)
.++|+|+||+||+|++++..|++.|+ +|++++++.... ...++.. ......+.. +.....++++++++|.||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 35899999999999999999999999 999888864211 1111111 000001111 112234667888999999
Q ss_pred EcCCCCCCCCCC-hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 102 IPAGVPRKPGMT-RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 102 ~~ag~~~~~g~~-r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
|+|+.......+ ..+.+..|+..+.++++.+.+.....++|++|.
T Consensus 83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS 128 (351)
T PLN02650 83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSS 128 (351)
T ss_pred EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 999754322222 235778899999999999988653346777654
No 56
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.00 E-value=8.6e-09 Score=89.12 Aligned_cols=117 Identities=14% Similarity=0.116 Sum_probs=76.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch-hHHHhhcCCCCCcceeEe----ecCCchhhhcCCCCEEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHINTRSEVAGY----MGNDQLGQALEDSDVVII 102 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~-~~~~dl~~~~~~~~v~~~----~~~~d~~~a~~~aD~Vi~ 102 (209)
+++|+|+||+||+|++++..|++.|+ +|++++++... ....++........+..+ ....++.++++++|+|||
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 46899999999999999999999998 99888776421 111111110000012111 112345677889999999
Q ss_pred cCCCCCCCCCC-hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 103 PAGVPRKPGMT-RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~~~g~~-r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+|+.......+ ..+++..|+..+.++++++.+.....+++++|.
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS 131 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSS 131 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeec
Confidence 99854222122 234668899999999999987643346666654
No 57
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.99 E-value=4e-09 Score=99.47 Aligned_cols=113 Identities=14% Similarity=0.091 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEecCCchhHHHhhcCCCCCcceeE----eecCCc-hhhhcCCCC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTPGVAADVGHINTRSEVAG----YMGNDQ-LGQALEDSD 98 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~-g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~----~~~~~d-~~~a~~~aD 98 (209)
.++.|||+||||+||+|++++..|++. |+ +|+.+|++.... ..+.... .++. +....+ ++++++++|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~~--~~~~~~~---~~~~~~gDl~d~~~~l~~~l~~~D 384 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDAI--SRFLGHP---RFHFVEGDISIHSEWIEYHIKKCD 384 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchhh--hhhcCCC---ceEEEeccccCcHHHHHHHhcCCC
Confidence 556689999999999999999999985 78 999999864211 1111111 1111 111112 356788999
Q ss_pred EEEEcCCCCCC--CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 99 VVIIPAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~--~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+|||+|+.... ...+..+++..|+..+.+++++++++. .++|++|.
T Consensus 385 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS 432 (660)
T PRK08125 385 VVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPST 432 (660)
T ss_pred EEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcc
Confidence 99999986432 223455678899999999999999875 46666664
No 58
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.99 E-value=3.6e-09 Score=91.91 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=74.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEecCCchhHHHhhcCCCCCcceeEee-----cCCchhhhcCCCCEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-----GNDQLGQALEDSDVVI 101 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~-g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~-----~~~d~~~a~~~aD~Vi 101 (209)
||||+||||+||+|++|+..|++. |+ +|+.+|+... ...++.... .++.+. ....+.++++++|+||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~--~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTD--RLGDLVNHP---RMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHH--HHHHhccCC---CeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 469999999999999999999886 67 9999998532 111222111 111111 0112446678999999
Q ss_pred EcCCCCCC--CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 102 IPAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 102 ~~ag~~~~--~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
|+|+.... ...+....+..|+..+.++++++++.. .++|++|.
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS 118 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 118 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEec
Confidence 99875422 123445567889999999999998754 47777664
No 59
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.97 E-value=8.4e-09 Score=89.25 Aligned_cols=120 Identities=13% Similarity=0.141 Sum_probs=81.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-H--------HHhhcCCC-----CCcceeEeecCCchhhh
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-V--------AADVGHIN-----TRSEVAGYMGNDQLGQA 93 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~--------~~dl~~~~-----~~~~v~~~~~~~d~~~a 93 (209)
..||+|+|+ |.+|..++..++..|+ +|+++|+++... . ...+.... ...++.. +++++++
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~a 80 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEAC 80 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHH
Confidence 358999999 9999999999999999 999999975210 0 00111110 0112332 3578899
Q ss_pred cCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE
Q 028437 94 LEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~ 173 (209)
+++||+|+.++ .+|.+..+++...+.+.+|... |+.||.+.. .++++.... -.|+|++|+
T Consensus 81 v~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a-IlaSnTS~l---~~s~la~~~--~~p~R~~g~ 140 (321)
T PRK07066 81 VADADFIQESA--------------PEREALKLELHERISRAAKPDA-IIASSTSGL---LPTDFYARA--THPERCVVG 140 (321)
T ss_pred hcCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe-EEEECCCcc---CHHHHHHhc--CCcccEEEE
Confidence 99999999984 3567788888899999886432 679999874 234443333 235677665
No 60
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.96 E-value=5.9e-09 Score=88.35 Aligned_cols=110 Identities=16% Similarity=0.106 Sum_probs=74.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC-CcceeEeecCCchhhhcCCC-CEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-RSEVAGYMGNDQLGQALEDS-DVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~-~~~v~~~~~~~d~~~a~~~a-D~Vi~~ag~ 106 (209)
|+|+|+||+||+|++|+..|++.|+ +|+.+|+......... ..... ...+.. .....+.++++ |.|||+|+.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~~~~d~~~---~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEFVVLDLTD---RDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccceeeecccc---hHHHHHHHhcCCCEEEEcccc
Confidence 3599999999999999999999999 9999998542211111 01100 001111 12345566777 999999987
Q ss_pred CCCCCCC---hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 107 PRKPGMT---RDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 107 ~~~~g~~---r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
...++.. ..++...|+..++++++++++ +...++++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~s 115 (314)
T COG0451 75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFAS 115 (314)
T ss_pred CchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeC
Confidence 6544432 245889999999999999998 4444555533
No 61
>PLN02214 cinnamoyl-CoA reductase
Probab=98.95 E-value=7.6e-09 Score=90.04 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH---HHhhcCCCCCcceeE----eecCCchhhhcCCCCEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV---AADVGHINTRSEVAG----YMGNDQLGQALEDSDVV 100 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~---~~dl~~~~~~~~v~~----~~~~~d~~~a~~~aD~V 100 (209)
+++|+|+||+||+|++++..|+++|+ +|++++++..... ...+.... ..+.. +....++.++++++|+|
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGGK--ERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCCC--CcEEEEecCcCChHHHHHHHhcCCEE
Confidence 45899999999999999999999999 9999988642111 11221110 01111 11223567788999999
Q ss_pred EEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
||+|+... .+..+.+..|+..+.++++++.+.... +++++|.
T Consensus 86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~-r~V~~SS 127 (342)
T PLN02214 86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVK-RVVITSS 127 (342)
T ss_pred EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEecc
Confidence 99998642 234567888999999999999876533 5666654
No 62
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.95 E-value=4e-09 Score=89.91 Aligned_cols=123 Identities=14% Similarity=0.208 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-H--------HHhhcCCC-C-----CcceeEeecCCchh
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-V--------AADVGHIN-T-----RSEVAGYMGNDQLG 91 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~--------~~dl~~~~-~-----~~~v~~~~~~~d~~ 91 (209)
++.||+|+|+ |.+|..++..++..|+ +|+++|+++... . ...+.+.. . ...+..+..++++
T Consensus 4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~- 79 (286)
T PRK07819 4 AIQRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL- 79 (286)
T ss_pred CccEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-
Confidence 3459999999 9999999999999999 999999985211 0 00111111 0 0011111124576
Q ss_pred hhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcE
Q 028437 92 QALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKL 170 (209)
Q Consensus 92 ~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~v 170 (209)
+++++||+||.++ .++.+..+++...+++.+ +.. .|++||.+.... +... ... -.++|+
T Consensus 80 ~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~-~il~snTS~~~~---~~la-~~~-~~~~r~ 139 (286)
T PRK07819 80 GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPD-AVLASNTSSIPI---MKLA-AAT-KRPGRV 139 (286)
T ss_pred HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCC-cEEEECCCCCCH---HHHH-hhc-CCCccE
Confidence 6789999999994 456788888999999987 433 345888877532 2222 222 234566
Q ss_pred EEE
Q 028437 171 FGV 173 (209)
Q Consensus 171 ig~ 173 (209)
+|+
T Consensus 140 ~g~ 142 (286)
T PRK07819 140 LGL 142 (286)
T ss_pred EEE
Confidence 665
No 63
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.94 E-value=1.1e-08 Score=82.05 Aligned_cols=122 Identities=21% Similarity=0.302 Sum_probs=69.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC----------------CcceeEeecCCchhh
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT----------------RSEVAGYMGNDQLGQ 92 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~----------------~~~v~~~~~~~d~~~ 92 (209)
|||+|+|. |++|..++..|++.|+ +|+.+|.++. ....++.... ..++.. ++|.++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~--~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~ 72 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEE--KVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEE 72 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HH--HHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChH--HHHHHhhccccccccchhhhhccccccccchh---hhhhhh
Confidence 79999999 9999999999999999 9999999852 1112222110 123333 467888
Q ss_pred hcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCCCCcHHHHHHHHHHhCC
Q 028437 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMI-SNPVNSTVPIAAEVFKKAGT 164 (209)
Q Consensus 93 a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~-snP~~~~~~i~~~~~~~~~~ 164 (209)
+++++|++|+|++.|..++.. -+...+...++.+.++. ++..+++= |-|++++--++..++.+.++
T Consensus 73 ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~ 140 (185)
T PF03721_consen 73 AIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSG 140 (185)
T ss_dssp HHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCC
T ss_pred hhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcc
Confidence 899999999999888655321 12344455555555544 34433333 56677544344556666553
No 64
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.92 E-value=1.4e-08 Score=87.64 Aligned_cols=116 Identities=15% Similarity=0.161 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH--HHhhcCCCCCccee-EeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV--AADVGHINTRSEVA-GYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~--~~dl~~~~~~~~v~-~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.++|+|+||+|++|++++..|++.|...+|+++|++..... ..++...... .+. ++...++++++++++|+||++|
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLR-FFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999999998762228999998643211 1112111100 011 1112234667788999999999
Q ss_pred CCCCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 105 GVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 105 g~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
|....+ ..+..+++..|+..+.++++++.+.+. .++|++|
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~-~~iV~~S 124 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGV-KRVVALS 124 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEe
Confidence 865322 234567889999999999999997643 3566665
No 65
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.90 E-value=3.6e-08 Score=83.56 Aligned_cols=116 Identities=18% Similarity=0.145 Sum_probs=74.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch---hHHHhhcCCCCCcc-ee-EeecCCchhhhcCC--CCEEEE
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHINTRSE-VA-GYMGNDQLGQALED--SDVVII 102 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~---~~~~dl~~~~~~~~-v~-~~~~~~d~~~a~~~--aD~Vi~ 102 (209)
||+|+||+|++|++++..|++.+...+|+++|+.... ....++.... ... +. ++...+++.+++++ +|+||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNP-RYRFVKGDIGDRELVSRLFTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCC-CcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence 5899999999999999999987621288988864211 1111221110 001 11 11122345667776 899999
Q ss_pred cCCCCCC--CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 103 PAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~~--~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+|+.... .......++..|+..+.++++.+.+...+.+++++|.
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss 125 (317)
T TIGR01181 80 FAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHIST 125 (317)
T ss_pred cccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeec
Confidence 9986431 1223456778899999999999988655556776653
No 66
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.89 E-value=1.7e-08 Score=91.04 Aligned_cols=116 Identities=19% Similarity=0.190 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hh---------------HHHhhcCCCCCcceeEe----
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PG---------------VAADVGHINTRSEVAGY---- 84 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~---------------~~~dl~~~~~~~~v~~~---- 84 (209)
++|||+||||+||||++|+..|+++|+ +|+++|+... .. ....+.+.. ...+..+
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~Dl 122 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVGDI 122 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEECCC
Confidence 446899999999999999999999998 9999985311 00 000000000 0011111
Q ss_pred ecCCchhhhcC--CCCEEEEcCCCCCCCC--CCh---hHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 85 MGNDQLGQALE--DSDVVIIPAGVPRKPG--MTR---DDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 85 ~~~~d~~~a~~--~aD~Vi~~ag~~~~~g--~~r---~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
....+++++++ ++|+|||+|+....+- .+. ...+..|+..+.++++.+++.+...+++.+|
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~S 190 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLG 190 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEe
Confidence 11223455666 4899999986543211 111 2345789999999999999877555666554
No 67
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.88 E-value=1.8e-08 Score=87.34 Aligned_cols=115 Identities=9% Similarity=-0.001 Sum_probs=72.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch---hHHHhhcCCC---CCcceeE----eecCCchhhhcCC--
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHIN---TRSEVAG----YMGNDQLGQALED-- 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~---~~~~dl~~~~---~~~~v~~----~~~~~d~~~a~~~-- 96 (209)
++|+||||+||+|++++..|++.|+ +|+++|+.... .....+.... ....+.. +....++++++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 4899999999999999999999999 99999986421 1111111000 0001111 1112235566774
Q ss_pred CCEEEEcCCCCCCCC--CChhHHHHHHHHHHHHHHHHHHhhCC--CeEEEEec
Q 028437 97 SDVVIIPAGVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCP--NAIVNMIS 145 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p--~~~viv~s 145 (209)
+|+|||+|+...... .........|+..+.++++++.+.+- ..+++++|
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~S 131 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQAS 131 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEec
Confidence 599999998653221 12334556788899999999988652 23566554
No 68
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.88 E-value=3.6e-08 Score=84.63 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=75.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch-hHHHhhcCC-CCCcceeE----eecCCchhhhcCCCCEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHI-NTRSEVAG----YMGNDQLGQALEDSDVVI 101 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~-~~~~dl~~~-~~~~~v~~----~~~~~d~~~a~~~aD~Vi 101 (209)
.++|+|+||+|++|++++..|++.|+ +|++..++... .....+... .....+.. +....+++++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 36999999999999999999999999 89877665421 111222110 00111221 112234677789999999
Q ss_pred EcCCCCCCC-CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 102 IPAGVPRKP-GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 102 ~~ag~~~~~-g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
|+|+..... .....+++..|+..+.++++.+++...-.++|++|.
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS 128 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSS 128 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecc
Confidence 999864211 112234678899999999999886532236666654
No 69
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.87 E-value=2.3e-08 Score=85.37 Aligned_cols=113 Identities=15% Similarity=0.112 Sum_probs=77.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~ 108 (209)
|||+|+||+|++|++++..|++.|+ +|+++++++... .++..........++....++.++++++|.||++++...
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~ 76 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDR--RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYR 76 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCccc--cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecc
Confidence 5899999999999999999999998 999999964221 111111111000111112346678889999999987543
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 109 ~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
....+..+....|+..+.++++.+.+.... +++++|.
T Consensus 77 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 113 (328)
T TIGR03466 77 LWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTSS 113 (328)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEec
Confidence 233445677889999999999999876433 5666654
No 70
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.87 E-value=1.1e-08 Score=87.33 Aligned_cols=99 Identities=18% Similarity=0.203 Sum_probs=68.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC--CCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~--~aD~Vi~~ag~ 106 (209)
|||+|+||+||+|++++..|++.| +|+.+|+... ....|+.+ ...++++++ ++|+|||+|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~-~~~~Dl~d------------~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHST-DYCGDFSN------------PEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccc-cccCCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence 589999999999999999999888 5777877421 00011111 123455666 58999999986
Q ss_pred CCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 107 PRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 107 ~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
.... ..+.......|+..+.++++++++.+ .+++.+|
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~S 103 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYS 103 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Confidence 5322 12344556789999999999998864 3566554
No 71
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.87 E-value=1.9e-08 Score=85.30 Aligned_cols=105 Identities=17% Similarity=0.106 Sum_probs=73.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcC--CC-CCcceeEeecCCchhhhcC--CCCEEEEc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGH--IN-TRSEVAGYMGNDQLGQALE--DSDVVIIP 103 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~--~~-~~~~v~~~~~~~d~~~a~~--~aD~Vi~~ 103 (209)
|+|+|+|++|+||++.+..|++.|+ +|+++|+-. .+....+.. .. ...++.+ ..-+.+.++ ..|.|||.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~-~g~~~~v~~~~~~f~~gDi~D---~~~L~~vf~~~~idaViHF 74 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLS-NGHKIALLKLQFKFYEGDLLD---RALLTAVFEENKIDAVVHF 74 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCC-CCCHHHhhhccCceEEecccc---HHHHHHHHHhcCCCEEEEC
Confidence 6899999999999999999999999 999999953 111111111 11 0111211 112344443 68999999
Q ss_pred CCCCCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCe
Q 028437 104 AGVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNA 139 (209)
Q Consensus 104 ag~~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~ 139 (209)
||....+. .....|+..|+-.+..++++|.+.+.+.
T Consensus 75 Aa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~ 112 (329)
T COG1087 75 AASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKK 112 (329)
T ss_pred ccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCE
Confidence 98654222 3577899999999999999999988654
No 72
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.86 E-value=5.5e-08 Score=84.50 Aligned_cols=107 Identities=18% Similarity=0.160 Sum_probs=67.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeE----eecCCchhhhcCC--CCEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAG----YMGNDQLGQALED--SDVVI 101 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~~--aD~Vi 101 (209)
|+||+|+||+||+|++++..|+++|+ ..++++|+.........+........+.. +...+++++++++ +|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence 35899999999999999999999986 23556776422111111111100001111 1112345566664 89999
Q ss_pred EcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHHhh
Q 028437 102 IPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKY 135 (209)
Q Consensus 102 ~~ag~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~ 135 (209)
|+||..... .....++...|+..+.++++.+.++
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~ 115 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAY 115 (355)
T ss_pred ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHh
Confidence 999875321 1234567889999999999999874
No 73
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.86 E-value=2.5e-09 Score=87.14 Aligned_cols=128 Identities=16% Similarity=0.286 Sum_probs=88.5
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc------hhHHHhhcCC------CCC--------cceeE
Q 028437 24 ESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT------PGVAADVGHI------NTR--------SEVAG 83 (209)
Q Consensus 24 ~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~------~~~~~dl~~~------~~~--------~~v~~ 83 (209)
.|.++..|+|+|| |.+|+.+++..++.|+ .|.++|.++. ++....+.+. +-+ ..+..
T Consensus 7 ~~~~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~r 83 (298)
T KOG2304|consen 7 NMAEIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDR 83 (298)
T ss_pred ccccccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHH
Confidence 3566679999999 9999999999999999 9999999751 1111111110 000 01111
Q ss_pred eecCCchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhC
Q 028437 84 YMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAG 163 (209)
Q Consensus 84 ~~~~~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~ 163 (209)
+..+++..+++.++|+||.+ ..+|+++.+.+.+.+++.|+.. -|+.||.+... ++.++...
T Consensus 84 i~~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~-~il~tNTSSl~---lt~ia~~~- 144 (298)
T KOG2304|consen 84 IKTSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSS-TILATNTSSLS---LTDIASAT- 144 (298)
T ss_pred HHHcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccc-eEEeeccccee---HHHHHhhc-
Confidence 12246788899999999887 5789999999999999999654 35689998863 34443322
Q ss_pred CCCCCcEEEEe
Q 028437 164 TYNEKKLFGVT 174 (209)
Q Consensus 164 ~~p~~~vig~~ 174 (209)
-.+.|+.|++
T Consensus 145 -~~~srf~GlH 154 (298)
T KOG2304|consen 145 -QRPSRFAGLH 154 (298)
T ss_pred -cChhhhceee
Confidence 3566888874
No 74
>PLN02583 cinnamoyl-CoA reductase
Probab=98.85 E-value=3.6e-08 Score=84.05 Aligned_cols=114 Identities=12% Similarity=0.056 Sum_probs=76.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH----HHhhcCCCCCcceeE----eecCCchhhhcCCCCEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV----AADVGHINTRSEVAG----YMGNDQLGQALEDSDVV 100 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~----~~dl~~~~~~~~v~~----~~~~~d~~~a~~~aD~V 100 (209)
++|+|+||+|++|++++..|+++|+ +|++++++..... ..++.... ..+.. +....++.+++.++|.|
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~~~~~l~~~d~v 82 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCEE--ERLKVFDVDPLDYHSILDALKGCSGL 82 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccCC--CceEEEEecCCCHHHHHHHHcCCCEE
Confidence 4799999999999999999999999 9999887531111 12221111 11211 11223467889999999
Q ss_pred EEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 101 IIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 101 i~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
++.++.+........+++..|+..+.++++++.+...-.++|++|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS 128 (297)
T PLN02583 83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSS 128 (297)
T ss_pred EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Confidence 9877544321122456788999999999999987632246666654
No 75
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.85 E-value=2.6e-08 Score=87.66 Aligned_cols=117 Identities=13% Similarity=0.008 Sum_probs=74.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+...|||+|+||+||+|++++..|.+.|+ +|+.+|+.... ...+.... ......++....++.++++++|+|||+|
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~~~~~~~~-~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 93 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-HMSEDMFC-HEFHLVDLRVMENCLKVTKGVDHVFNLA 93 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-cccccccc-ceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence 33557999999999999999999999999 99999985311 00000000 0000001111123455678999999998
Q ss_pred CCCCCCC---CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 105 GVPRKPG---MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 105 g~~~~~g---~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+.....+ .+....+..|+..+.++++++++.... ++|++|.
T Consensus 94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk-~~V~~SS 137 (370)
T PLN02695 94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVK-RFFYASS 137 (370)
T ss_pred cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCC-EEEEeCc
Confidence 7532111 122345678999999999999876543 5666654
No 76
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.84 E-value=9.1e-08 Score=82.15 Aligned_cols=117 Identities=13% Similarity=0.077 Sum_probs=76.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcC-CCCCcceeE----eecCCchhhhcCCCCEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGH-INTRSEVAG----YMGNDQLGQALEDSDVVI 101 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~-~~~~~~v~~----~~~~~d~~~a~~~aD~Vi 101 (209)
.++|+|+||+|++|++++..|++.|+ +|++.++++... ....+.. ......+.. +....+++++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 46899999999999999999999999 998887764211 1111111 010011211 112234667788999999
Q ss_pred EcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 102 IPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 102 ~~ag~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
++||..... .....+.+..|+..+.++++.+.+.....+++++|.
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS 129 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSS 129 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 999864221 122345678899999999999987643346666654
No 77
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.83 E-value=3.9e-08 Score=85.65 Aligned_cols=117 Identities=13% Similarity=0.033 Sum_probs=74.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH--HHhhcCCCCCcceeEee----cCCchhhhcCCCC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV--AADVGHINTRSEVAGYM----GNDQLGQALEDSD 98 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~--~~dl~~~~~~~~v~~~~----~~~d~~~a~~~aD 98 (209)
....|+|+|+||+||+|++++..|++.|+ +|++++++..... ..++... ..+..+. ...+++++++++|
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~d 81 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKEG---DRLRLFRADLQEEGSFDEAVKGCD 81 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhccC---CeEEEEECCCCCHHHHHHHHcCCC
Confidence 34457999999999999999999999998 9999888642211 1122111 1122111 1123566778999
Q ss_pred EEEEcCCCCCCC---C-CChhH-----HHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 99 VVIIPAGVPRKP---G-MTRDD-----LFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~~---g-~~r~~-----~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
.|||+|+..... . .+..+ .+..|+..+.++++++.+.....+++++|.
T Consensus 82 ~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS 138 (353)
T PLN02896 82 GVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSS 138 (353)
T ss_pred EEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEec
Confidence 999999864321 1 12223 334456889999999887642346666654
No 78
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.82 E-value=9.7e-08 Score=83.05 Aligned_cols=116 Identities=17% Similarity=0.111 Sum_probs=75.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH-H-HhhcCCCCCccee-EeecCCchhhhcCC--CCEEEEc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-A-ADVGHINTRSEVA-GYMGNDQLGQALED--SDVVIIP 103 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~-~-~dl~~~~~~~~v~-~~~~~~d~~~a~~~--aD~Vi~~ 103 (209)
++|+|+||+|++|++++..|++.|+ +|+.+++++.... . ..+........+. ++....++.+.+++ .|+||++
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 5899999999999999999999999 9999998653111 1 1111110000011 11112234455654 5999999
Q ss_pred CCCCCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 104 AGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 104 ag~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
|+.+... ..+....+..|+....++++++.+.+...+++++|.
T Consensus 83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS 127 (349)
T TIGR02622 83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTS 127 (349)
T ss_pred CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 9854321 123456778999999999999987653346777764
No 79
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.81 E-value=5.3e-08 Score=89.72 Aligned_cols=117 Identities=19% Similarity=0.158 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcC-----CCC--CcceeE----eecCCchhhh
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGH-----INT--RSEVAG----YMGNDQLGQA 93 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~-----~~~--~~~v~~----~~~~~d~~~a 93 (209)
....|+|+||+|++|+.++..|++.|+ +|++++++.... ...++.+ ... ...+.. +...++++++
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 445899999999999999999999999 999999975321 1111111 000 001111 1112345677
Q ss_pred cCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 94 LEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+.++|+||+++|.......+....+..|...+.++++++.+.+. .+||++|.
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agV-gRIV~VSS 208 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKV-NHFILVTS 208 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCC-CEEEEEcc
Confidence 89999999999875432222334567788999999999987643 46666663
No 80
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.80 E-value=1.8e-08 Score=85.79 Aligned_cols=119 Identities=21% Similarity=0.260 Sum_probs=72.7
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhc----CCCCCcc----eeEeecCCchhhhcC--CCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVG----HINTRSE----VAGYMGNDQLGQALE--DSD 98 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~----~~~~~~~----v~~~~~~~d~~~a~~--~aD 98 (209)
|+||||+|++|+.|+..|++.+. .+|+++|+++. .....++. +...... +.++.+...+..+++ +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 78999999999999999999875 48999999862 22233342 1111101 111111223567788 999
Q ss_pred EEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEe----cCCCCC
Q 028437 99 VVIIPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI----SNPVNS 150 (209)
Q Consensus 99 ~Vi~~ag~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~----snP~~~ 150 (209)
+|||+|+.-..| .....+.+..|+-.++++++++.+++.+..+.+- .||.+.
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptnv 137 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNV 137 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcH
Confidence 999998764322 2356778899999999999999998766544444 478875
No 81
>PLN02778 3,5-epimerase/4-reductase
Probab=98.79 E-value=5.8e-08 Score=83.08 Aligned_cols=88 Identities=17% Similarity=0.141 Sum_probs=63.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC--CCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~--~aD~Vi~~ag 105 (209)
.|||+|+||+||+|++++..|.++|+ +|+....+. .+.. .++..++ ++|+|||+|+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~--------~~~~------------~v~~~l~~~~~D~ViH~Aa 66 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRL--------ENRA------------SLEADIDAVKPTHVFNAAG 66 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCcc--------CCHH------------HHHHHHHhcCCCEEEECCc
Confidence 37999999999999999999999998 876543221 1100 0112222 6899999998
Q ss_pred CCCCCC-----CChhHHHHHHHHHHHHHHHHHHhhCC
Q 028437 106 VPRKPG-----MTRDDLFNINAGIVKDLCSAIAKYCP 137 (209)
Q Consensus 106 ~~~~~g-----~~r~~~~~~N~~~~~~i~~~i~~~~p 137 (209)
....+. .+..+++..|+..+.++++.+++.+.
T Consensus 67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv 103 (298)
T PLN02778 67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL 103 (298)
T ss_pred ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 753221 24567889999999999999998753
No 82
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.78 E-value=5.4e-08 Score=82.86 Aligned_cols=120 Identities=21% Similarity=0.380 Sum_probs=75.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHH----hhc-----CCCC---------CcceeEeecCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAA----DVG-----HINT---------RSEVAGYMGND 88 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~----dl~-----~~~~---------~~~v~~~~~~~ 88 (209)
.+||+|+|+ |.+|..++..+++.|+ +|+++|+++... ... .+. .... ...+.. ++
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~ 76 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TT 76 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eC
Confidence 469999999 9999999999999999 999999975210 000 000 0000 012222 45
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~ 168 (209)
|+++++++||+||.++. ++.+..+++++.+.++.++.. ++++|.+.. .++++..... .++
T Consensus 77 d~~~a~~~aDlVieavp--------------e~~~~k~~~~~~l~~~~~~~~-ii~sntSt~---~~~~~~~~~~--~~~ 136 (287)
T PRK08293 77 DLAEAVKDADLVIEAVP--------------EDPEIKGDFYEELAKVAPEKT-IFATNSSTL---LPSQFAEATG--RPE 136 (287)
T ss_pred CHHHHhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCC-EEEECcccC---CHHHHHhhcC--Ccc
Confidence 77888999999999952 335666777888888775432 346777664 2233433321 244
Q ss_pred cEEEE
Q 028437 169 KLFGV 173 (209)
Q Consensus 169 ~vig~ 173 (209)
|++|+
T Consensus 137 r~vg~ 141 (287)
T PRK08293 137 KFLAL 141 (287)
T ss_pred cEEEE
Confidence 66654
No 83
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.78 E-value=3.2e-08 Score=94.06 Aligned_cols=124 Identities=17% Similarity=0.182 Sum_probs=84.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hh--HHH----hhcCCC------CCcceeEeecCCchh
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PG--VAA----DVGHIN------TRSEVAGYMGNDQLG 91 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~--~~~----dl~~~~------~~~~v~~~~~~~d~~ 91 (209)
+..||+|+|| |.+|..++..++..|+ +|+++|.++. .+ ... .+.+.. ....+..+..++++
T Consensus 312 ~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 387 (714)
T TIGR02437 312 DVKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPTLSY- 387 (714)
T ss_pred ccceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-
Confidence 4469999999 9999999999999999 9999999752 11 010 111110 00011112224565
Q ss_pred hhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEE
Q 028437 92 QALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLF 171 (209)
Q Consensus 92 ~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vi 171 (209)
+++++||+||.++ .++++..+++...+++.++.. .|++||.+.. .++++.... -.|+|++
T Consensus 388 ~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~-~ilasnTS~l---~i~~ia~~~--~~p~r~i 447 (714)
T TIGR02437 388 AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVRED-AILASNTSTI---SISLLAKAL--KRPENFC 447 (714)
T ss_pred HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCC-cEEEECCCCC---CHHHHHhhc--CCcccEE
Confidence 6789999999994 467899999999999998533 3469999886 345554433 2467888
Q ss_pred EEe
Q 028437 172 GVT 174 (209)
Q Consensus 172 g~~ 174 (209)
|++
T Consensus 448 g~H 450 (714)
T TIGR02437 448 GMH 450 (714)
T ss_pred EEe
Confidence 884
No 84
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.77 E-value=5.2e-08 Score=84.57 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=66.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee----EeecCCchhhhcC--CCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA----GYMGNDQLGQALE--DSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~----~~~~~~d~~~a~~--~aD~Vi~ 102 (209)
|||+|+||+|++|++++..|+++|. ..++.+|+.........+........+. ++...+++.++++ ++|+|||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 5899999999999999999999886 1466677532111111111100001111 1111224455665 4899999
Q ss_pred cCCCCCC--CCCChhHHHHHHHHHHHHHHHHHHhh
Q 028437 103 PAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKY 135 (209)
Q Consensus 103 ~ag~~~~--~g~~r~~~~~~N~~~~~~i~~~i~~~ 135 (209)
+|+.... ......+++..|+..+.++++.+.++
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 114 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY 114 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence 9986432 12234678899999999999999875
No 85
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.77 E-value=3.5e-08 Score=93.87 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=84.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hh--H----HHhhcCCC-C--------CcceeEeecCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PG--V----AADVGHIN-T--------RSEVAGYMGND 88 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~--~----~~dl~~~~-~--------~~~v~~~~~~~ 88 (209)
+..||+|+|| |.+|..++..++..|+ +|+++|+++. .+ . ...+.... . ..+++. ++
T Consensus 312 ~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~ 385 (715)
T PRK11730 312 PVKQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP---TL 385 (715)
T ss_pred ccceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eC
Confidence 3468999999 9999999999999999 9999999752 11 0 01111110 0 013332 45
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~ 168 (209)
|+ +++++||+||.++ .++++..+++...++++++.. .|++||.+.. .++++..... .|+
T Consensus 386 ~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~-~ilasNTSsl---~i~~la~~~~--~p~ 444 (715)
T PRK11730 386 DY-AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVRED-TILASNTSTI---SISLLAKALK--RPE 444 (715)
T ss_pred CH-HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCC-cEEEEcCCCC---CHHHHHhhcC--CCc
Confidence 66 6789999999984 467899999999999998543 3469999885 3455544332 466
Q ss_pred cEEEE
Q 028437 169 KLFGV 173 (209)
Q Consensus 169 ~vig~ 173 (209)
|++|+
T Consensus 445 r~~g~ 449 (715)
T PRK11730 445 NFCGM 449 (715)
T ss_pred cEEEE
Confidence 88886
No 86
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.77 E-value=1.1e-07 Score=82.03 Aligned_cols=115 Identities=19% Similarity=0.150 Sum_probs=73.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCC-CCcc-ee-EeecCCchhhhcC--CCCEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHIN-TRSE-VA-GYMGNDQLGQALE--DSDVVI 101 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~-~~~~-v~-~~~~~~d~~~a~~--~aD~Vi 101 (209)
|||+|+||+|++|++++..|++.|+ +|+++++... ......+.+.. .... +. ++....++.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 5899999999999999999999998 9999986421 11111111110 0001 11 1111122444554 689999
Q ss_pred EcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 102 IPAGVPRKP--GMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 102 ~~ag~~~~~--g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
++|+..... .....+++..|+..+.++++.+++... .+++++|.
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss 124 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANV-KNLIFSSS 124 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecc
Confidence 998865321 123457788999999999999987643 35666553
No 87
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.75 E-value=5.7e-08 Score=84.07 Aligned_cols=116 Identities=12% Similarity=-0.018 Sum_probs=73.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch---hHHHhhcCC--CCCcceeE----eecCCchhhhcCC--
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHI--NTRSEVAG----YMGNDQLGQALED-- 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~---~~~~dl~~~--~~~~~v~~----~~~~~d~~~a~~~-- 96 (209)
.++|+|+||+|++|++++..|++.|+ +|++++++... .....+... .....+.. +....++++++++
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 46899999999999999999999999 99999885321 111112110 00011111 1112234555664
Q ss_pred CCEEEEcCCCCCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCC----eEEEEec
Q 028437 97 SDVVIIPAGVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPN----AIVNMIS 145 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~----~~viv~s 145 (209)
.|+|||+|+...... .+....+..|+..+.++++.+.+.... .+++++|
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~S 138 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAG 138 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEec
Confidence 599999998743221 123445678999999999999887643 2555554
No 88
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.75 E-value=1.3e-07 Score=84.02 Aligned_cols=120 Identities=19% Similarity=0.122 Sum_probs=78.8
Q ss_pred ccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh----HHHhhcCCCCCcc-ee-EeecCCchhhhc
Q 028437 21 YSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG----VAADVGHINTRSE-VA-GYMGNDQLGQAL 94 (209)
Q Consensus 21 ~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~----~~~dl~~~~~~~~-v~-~~~~~~d~~~a~ 94 (209)
|-+++...+||+|+||+|++|++++..|+++|+ +|++++++.... ...++........ +. ++...+++++++
T Consensus 53 ~~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~ 130 (390)
T PLN02657 53 FRSKEPKDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVL 130 (390)
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHH
Confidence 777888889999999999999999999999999 999999864211 0111111000011 11 111223456666
Q ss_pred C----CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 95 E----DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 95 ~----~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+ ++|+||++++.+... ..+....|.....++++++++... .+++++|.
T Consensus 131 ~~~~~~~D~Vi~~aa~~~~~---~~~~~~vn~~~~~~ll~aa~~~gv-~r~V~iSS 182 (390)
T PLN02657 131 FSEGDPVDVVVSCLASRTGG---VKDSWKIDYQATKNSLDAGREVGA-KHFVLLSA 182 (390)
T ss_pred HHhCCCCcEEEECCccCCCC---CccchhhHHHHHHHHHHHHHHcCC-CEEEEEee
Confidence 6 599999998754211 123456788889999999987653 35666663
No 89
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.74 E-value=4.5e-08 Score=82.16 Aligned_cols=98 Identities=19% Similarity=0.224 Sum_probs=68.8
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCCCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKP 110 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~~~ 110 (209)
|+|+||+|++|++++..|++.|+ +|+.+++++..... +... .+..... .+..++++++|+||++|+.+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~~----~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKWE----GYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccce----eeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 58999999999999999999998 99999997532111 1000 0111111 23457789999999999875422
Q ss_pred C----CChhHHHHHHHHHHHHHHHHHHhhCC
Q 028437 111 G----MTRDDLFNINAGIVKDLCSAIAKYCP 137 (209)
Q Consensus 111 g----~~r~~~~~~N~~~~~~i~~~i~~~~p 137 (209)
+ ....++...|+..++++++.+++...
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 2 12345677899999999999998754
No 90
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.73 E-value=8.8e-08 Score=81.62 Aligned_cols=109 Identities=16% Similarity=0.196 Sum_probs=67.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCc-hhhhc-----CCCCEEEEcC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQ-LGQAL-----EDSDVVIIPA 104 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d-~~~a~-----~~aD~Vi~~a 104 (209)
|+|+||+||+|++|+..|++.|+ ..+.++|+.........+.+.+ +......++ +++++ .++|+|||+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLD----IADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhh----hhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 78999999999999999999997 2355566643211111111111 111000011 22222 3689999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+.+.....+...++..|+..+.++++.+.+.. .++|+.|.
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~~i~~SS 116 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--IPFLYASS 116 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcC--CcEEEEcc
Confidence 86443333445577889999999999998764 35666643
No 91
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.73 E-value=8.2e-08 Score=87.41 Aligned_cols=125 Identities=18% Similarity=0.225 Sum_probs=88.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCccee----EeecCCchhhhcCC--
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVA----GYMGNDQLGQALED-- 96 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~----~~~~~~d~~~a~~~-- 96 (209)
+-..++|.||||+|++|+.++..+++.+. .+|+++|+++.+ ....++.+.....++. ++.+.+.++.++++
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 33446899999999999999999988864 699999998632 1223344421111222 22223346788998
Q ss_pred CCEEEEcCCCCCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec----CCCCC
Q 028437 97 SDVVIIPAGVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS----NPVNS 150 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s----nP~~~ 150 (209)
.|+|+|+|+.-..|- .+..+-...|+-.++++++++.++.-+..+.+-| ||.+.
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNv 385 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNV 385 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchH
Confidence 999999998765554 3567778999999999999999887665554443 78775
No 92
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.73 E-value=2.3e-07 Score=87.60 Aligned_cols=119 Identities=13% Similarity=-0.005 Sum_probs=74.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEee-cCC---chhhhc--CCCCEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GND---QLGQAL--EDSDVVI 101 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~-~~~---d~~~a~--~~aD~Vi 101 (209)
+|||+|+||+||||++++..|++.+...+|+.+|+.........+........++.+. +-. .+.+.+ .++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 4699999999999999999999874222899998742111111111100001122211 011 122233 6899999
Q ss_pred EcCCCCCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 102 IPAGVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 102 ~~ag~~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
|+|+...... .+..++...|+..+.++++++++.+.-.++|++|.
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9998753221 23456778999999999999988754456777763
No 93
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.72 E-value=7.4e-08 Score=75.82 Aligned_cols=95 Identities=25% Similarity=0.264 Sum_probs=68.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEee----cCCchhhhcCCCCEEEEcCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM----GNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
|+|+||+|++|+.++..|+++|+ +|+++-|++.+.. + .. .++.+. ..+++.++++++|.||+++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~~--~--~~----~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKAE--D--SP----GVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGHH--H--CT----TEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhcc--c--cc----ccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 78999999999999999999998 9999999753222 2 11 122211 123467889999999999876
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP 147 (209)
+.+ ..+.++++++++++.+. .+++++|..
T Consensus 71 ~~~-----------~~~~~~~~~~a~~~~~~-~~~v~~s~~ 99 (183)
T PF13460_consen 71 PPK-----------DVDAAKNIIEAAKKAGV-KRVVYLSSA 99 (183)
T ss_dssp TTT-----------HHHHHHHHHHHHHHTTS-SEEEEEEET
T ss_pred hcc-----------ccccccccccccccccc-ccceeeecc
Confidence 542 16778899999988653 366666643
No 94
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.72 E-value=3.6e-07 Score=78.71 Aligned_cols=69 Identities=26% Similarity=0.477 Sum_probs=52.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC--C--------CCcceeEeecCCchhhhcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI--N--------TRSEVAGYMGNDQLGQALEDS 97 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~--~--------~~~~v~~~~~~~d~~~a~~~a 97 (209)
++||+|+|+ |..|.+|+..|.++|+ +|.+|.+++. ...++... . .+..+. .++|+++++++|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~~--~~~~i~~~~~N~~yLp~i~lp~~l~---at~Dl~~a~~~a 72 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDEE--IVAEINETRENPKYLPGILLPPNLK---ATTDLAEALDGA 72 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCHH--HHHHHHhcCcCccccCCccCCcccc---cccCHHHHHhcC
Confidence 479999999 9999999999999999 9999999852 22223322 1 122233 357899999999
Q ss_pred CEEEEcC
Q 028437 98 DVVIIPA 104 (209)
Q Consensus 98 D~Vi~~a 104 (209)
|+|++..
T Consensus 73 d~iv~av 79 (329)
T COG0240 73 DIIVIAV 79 (329)
T ss_pred CEEEEEC
Confidence 9999984
No 95
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.72 E-value=3.8e-08 Score=93.81 Aligned_cols=120 Identities=18% Similarity=0.238 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hh--HHH----hhcCCC-C--------CcceeEeecCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PG--VAA----DVGHIN-T--------RSEVAGYMGND 88 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~--~~~----dl~~~~-~--------~~~v~~~~~~~ 88 (209)
+..||+|+|| |.+|..++..++..|+ +|+++|+++. .+ ... .+.... . ..+++. ++
T Consensus 334 ~i~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~ 407 (737)
T TIGR02441 334 PVKTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTP---TL 407 (737)
T ss_pred cccEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eC
Confidence 4468999999 9999999999999999 9999999752 11 010 011100 0 013332 45
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~ 168 (209)
|+ +++++||+||.++ .+|.+..+++...++++++.. .|++||.+... ++++..... .|+
T Consensus 408 ~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~-~ilasNTSsl~---i~~la~~~~--~p~ 466 (737)
T TIGR02441 408 DY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPH-CIIASNTSALP---IKDIAAVSS--RPE 466 (737)
T ss_pred CH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCC-cEEEEcCCCCC---HHHHHhhcC--Ccc
Confidence 66 6799999999984 567899999999999998543 34589998863 344444332 457
Q ss_pred cEEEE
Q 028437 169 KLFGV 173 (209)
Q Consensus 169 ~vig~ 173 (209)
|++|+
T Consensus 467 r~ig~ 471 (737)
T TIGR02441 467 KVIGM 471 (737)
T ss_pred ceEEE
Confidence 88886
No 96
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.72 E-value=8.5e-08 Score=80.67 Aligned_cols=95 Identities=21% Similarity=0.270 Sum_probs=70.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCC--CEEEEcCCCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDS--DVVIIPAGVP 107 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~a--D~Vi~~ag~~ 107 (209)
||+|+||+|++|++++..|++.|+ +|+++++.. .|+.+ .++++++++++ |+||++++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence 689999999999999999999999 999998741 12221 12456667766 9999999865
Q ss_pred CCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 108 RKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 108 ~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
..+. ......+..|+..+.++++.+.+... +++++|
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 99 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS 99 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 3221 23456678899999999999987543 566655
No 97
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.71 E-value=9.5e-08 Score=83.54 Aligned_cols=119 Identities=19% Similarity=0.195 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCCCCCcceeE----eecCCchhhhcCCCCEE
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAG----YMGNDQLGQALEDSDVV 100 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~~aD~V 100 (209)
.++.+++|+||+||+|++++..|.+++...+|.++|..+. .....+.... ....++. +....++..+++++ .|
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~-~V 79 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA-VV 79 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-eE
Confidence 4567999999999999999999999985559999999653 1111111110 0111211 11234578899999 77
Q ss_pred EEcCCCCC-CCCC-ChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 028437 101 IIPAGVPR-KPGM-TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 101 i~~ag~~~-~~g~-~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP 147 (209)
+|+|..+. .... .+......|+..++++.+++.+.+-. ++|+.|+.
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~-~lIYtSs~ 127 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK-RLIYTSSA 127 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCC-EEEEecCc
Confidence 77755432 2222 47778899999999999999987643 45555543
No 98
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.69 E-value=1e-07 Score=81.33 Aligned_cols=101 Identities=23% Similarity=0.357 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-H-HHhh--------cCCCCC--------cceeEeecCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-V-AADV--------GHINTR--------SEVAGYMGND 88 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~-~~dl--------~~~~~~--------~~v~~~~~~~ 88 (209)
+.+||+|+|+ |.+|..++..|+..|+ +|+++|+++... . ...+ .....+ ..+.. ++
T Consensus 3 ~~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~ 76 (292)
T PRK07530 3 AIKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---AT 76 (292)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eC
Confidence 3469999999 9999999999999999 999999975211 1 0000 011000 11222 34
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCC
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS 150 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~ 150 (209)
++ +++++||+||.+... +....+.+.+.+.+.. +++. ++||.++.
T Consensus 77 ~~-~~~~~aD~Vieavpe--------------~~~~k~~~~~~l~~~~~~~~i--i~s~ts~~ 122 (292)
T PRK07530 77 DL-EDLADCDLVIEAATE--------------DETVKRKIFAQLCPVLKPEAI--LATNTSSI 122 (292)
T ss_pred CH-HHhcCCCEEEEcCcC--------------CHHHHHHHHHHHHhhCCCCcE--EEEcCCCC
Confidence 55 568999999999521 2233455556677766 4553 34677664
No 99
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.69 E-value=8.6e-08 Score=90.99 Aligned_cols=120 Identities=18% Similarity=0.261 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEecCCc---hh--HH----HhhcCCC-C--------CcceeEeecC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMK-LNPLVSRLALYDIANT---PG--VA----ADVGHIN-T--------RSEVAGYMGN 87 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~-~~g~~~ev~l~D~~~~---~~--~~----~dl~~~~-~--------~~~v~~~~~~ 87 (209)
+..||+|+|| |.+|..++..++ ..|+ +|+++|.++. .+ .. ..+.... . ..+++. +
T Consensus 303 ~i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~ 376 (699)
T TIGR02440 303 KIKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITG---T 376 (699)
T ss_pred cccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEE---e
Confidence 4469999999 999999999988 4899 9999999752 11 00 0111110 0 012332 4
Q ss_pred CchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCC
Q 028437 88 DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNE 167 (209)
Q Consensus 88 ~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~ 167 (209)
+++ +++++||+||.++ .++++..+++...++++++.. .|++||.+... ++++.... -.|
T Consensus 377 ~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~-~ilasnTS~l~---i~~la~~~--~~p 435 (699)
T TIGR02440 377 TDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAH-TIFASNTSSLP---IGQIAAAA--SRP 435 (699)
T ss_pred CCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCC-cEEEeCCCCCC---HHHHHHhc--CCc
Confidence 566 6799999999984 457899999999999999543 34689998863 34444333 246
Q ss_pred CcEEEE
Q 028437 168 KKLFGV 173 (209)
Q Consensus 168 ~~vig~ 173 (209)
+|++|+
T Consensus 436 ~r~~g~ 441 (699)
T TIGR02440 436 ENVIGL 441 (699)
T ss_pred ccEEEE
Confidence 678776
No 100
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.68 E-value=9.4e-08 Score=90.88 Aligned_cols=120 Identities=19% Similarity=0.312 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEecCCc---hh--HH----HhhcCCC-C--------CcceeEeecC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMK-LNPLVSRLALYDIANT---PG--VA----ADVGHIN-T--------RSEVAGYMGN 87 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~-~~g~~~ev~l~D~~~~---~~--~~----~dl~~~~-~--------~~~v~~~~~~ 87 (209)
+..||+|+|| |.+|..++..++ ..|+ +|+++|.++. .+ .. ..+.... . ..+++. +
T Consensus 308 ~i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~ 381 (708)
T PRK11154 308 PVNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---T 381 (708)
T ss_pred cccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---e
Confidence 4469999999 999999999998 7899 9999999741 11 01 0111110 0 113333 4
Q ss_pred CchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 028437 88 DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYN 166 (209)
Q Consensus 88 ~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p 166 (209)
+++ +++++||+||.++ .+|.+..+++...+++++ |++ |++||.+.. .++++.... -.
T Consensus 382 ~~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l---~i~~la~~~--~~ 439 (708)
T PRK11154 382 TDY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSL---PIGQIAAAA--AR 439 (708)
T ss_pred CCh-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCC---CHHHHHHhc--Cc
Confidence 566 6899999999984 567899999999999998 454 458999886 344444433 24
Q ss_pred CCcEEEEe
Q 028437 167 EKKLFGVT 174 (209)
Q Consensus 167 ~~~vig~~ 174 (209)
|+|++|++
T Consensus 440 p~r~ig~H 447 (708)
T PRK11154 440 PEQVIGLH 447 (708)
T ss_pred ccceEEEe
Confidence 56788773
No 101
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.68 E-value=4.2e-07 Score=82.60 Aligned_cols=121 Identities=14% Similarity=0.164 Sum_probs=75.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC-------CCCc-----ceeEeecCCchhhhcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI-------NTRS-----EVAGYMGNDQLGQALE 95 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~-------~~~~-----~v~~~~~~~d~~~a~~ 95 (209)
+|||+|+|+ |++|..++..|++.|+.-+|+.+|+++.+ ...++.. .... .-..+..+++++++++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~--v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~ 77 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR--IDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVA 77 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH--HHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHh
Confidence 579999999 99999999999988532289999998521 2222111 1000 0001222457778899
Q ss_pred CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEe--cCCCCCcH
Q 028437 96 DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI--SNPVNSTV 152 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~--snP~~~~~ 152 (209)
+||++|+|++.|........+ ..-++..+.+.++.+.++.++..+|+. |-|++++-
T Consensus 78 ~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~ 135 (473)
T PLN02353 78 EADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAE 135 (473)
T ss_pred cCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHH
Confidence 999999999988643210000 022445667777777776654444443 67777543
No 102
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.68 E-value=8.8e-08 Score=87.80 Aligned_cols=121 Identities=17% Similarity=0.235 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH-----H----HhhcCCCC---------CcceeEeecCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-----A----ADVGHINT---------RSEVAGYMGND 88 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~-----~----~dl~~~~~---------~~~v~~~~~~~ 88 (209)
+..||+|+|+ |.+|..++..++..|+ +|+++|+++.... . ..+..... -.++.. ++
T Consensus 6 ~i~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~ 79 (507)
T PRK08268 6 SIATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VE 79 (507)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eC
Confidence 4468999999 9999999999999999 9999999752110 0 01111110 012332 34
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~ 168 (209)
++ +++++||+||.++ .++.+..+.+...+++.++.. .|++||.+.... +++.... -.++
T Consensus 80 ~~-~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~-ailasntStl~i---~~la~~~--~~p~ 138 (507)
T PRK08268 80 AL-ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPD-CILATNTSSLSI---TAIAAAL--KHPE 138 (507)
T ss_pred CH-HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCC-cEEEECCCCCCH---HHHHhhc--CCcc
Confidence 65 5578999999984 345566677777888887433 244778776532 3333322 2356
Q ss_pred cEEEEe
Q 028437 169 KLFGVT 174 (209)
Q Consensus 169 ~vig~~ 174 (209)
|++|+.
T Consensus 139 r~~G~h 144 (507)
T PRK08268 139 RVAGLH 144 (507)
T ss_pred cEEEEe
Confidence 777764
No 103
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.68 E-value=9e-08 Score=75.85 Aligned_cols=123 Identities=13% Similarity=0.138 Sum_probs=78.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHH-Hh--hcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVA-AD--VGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~-~d--l~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|||+||||||.+|+.++.++.++|| ||+.+-|++.+-.+ .. +.+.+ +...+.+.+++.+-|+||.+.|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~~~~~~i~q~D-------ifd~~~~a~~l~g~DaVIsA~~ 71 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAARQGVTILQKD-------IFDLTSLASDLAGHDAVISAFG 71 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhccccccceeeccc-------ccChhhhHhhhcCCceEEEecc
Confidence 7999999999999999999999999 99999998632111 11 11111 1112344678999999999977
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~ 168 (209)
.+. ++. . ..-.+..+.+.+.++. +...++++++....+.+.. +..+.+.|.||++
T Consensus 72 ~~~-~~~--~---~~~~k~~~~li~~l~~-agv~RllVVGGAGSL~id~-g~rLvD~p~fP~e 126 (211)
T COG2910 72 AGA-SDN--D---ELHSKSIEALIEALKG-AGVPRLLVVGGAGSLEIDE-GTRLVDTPDFPAE 126 (211)
T ss_pred CCC-CCh--h---HHHHHHHHHHHHHHhh-cCCeeEEEEcCccceEEcC-CceeecCCCCchh
Confidence 653 221 1 1122335666666664 3466889998776542211 1233455666654
No 104
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.67 E-value=4.1e-08 Score=79.79 Aligned_cols=112 Identities=18% Similarity=0.188 Sum_probs=73.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCC--CEEEEcCCCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDS--DVVIIPAGVPR 108 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~a--D~Vi~~ag~~~ 108 (209)
|+|+||+|++|++++..|+++|+ +|+.+.+............ ......-.+...+++++++++. |.||++|+...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKL-NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSS 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHT-TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccc-eEEEEEeeccccccccccccccCceEEEEeecccc
Confidence 78999999999999999999999 8777766542221111111 1000000011122456667766 99999998753
Q ss_pred C--CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 109 K--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 109 ~--~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
. ...+..++...|+...+++++.+++... .++++.|.
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~sS 116 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLSS 116 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccc-cccccccc
Confidence 1 1134567788999999999999998876 56666654
No 105
>PLN02686 cinnamoyl-CoA reductase
Probab=98.67 E-value=1.4e-07 Score=83.06 Aligned_cols=118 Identities=10% Similarity=0.091 Sum_probs=74.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcCC---C-CCcceeE----eecCCchhhhcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHI---N-TRSEVAG----YMGNDQLGQALEDS 97 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~~---~-~~~~v~~----~~~~~d~~~a~~~a 97 (209)
++++|+|+||+||+|++++..|+++|+ +|+++.++.... ...++... . ....+.. +...+++.++++++
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 346899999999999999999999999 998876653211 11122100 0 0001111 11123466778999
Q ss_pred CEEEEcCCCCCCCCC--ChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 98 DVVIIPAGVPRKPGM--TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~~g~--~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
|.||++++.....+. ...++...|+..+.++++++.+...-.++|++|.
T Consensus 130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS 180 (367)
T PLN02686 130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSS 180 (367)
T ss_pred cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Confidence 999999876432221 2234567799999999999987532225666654
No 106
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.67 E-value=1.1e-07 Score=87.13 Aligned_cols=121 Identities=21% Similarity=0.296 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH---------HHhhcCCCC---------CcceeEeecCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV---------AADVGHINT---------RSEVAGYMGND 88 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~---------~~dl~~~~~---------~~~v~~~~~~~ 88 (209)
+..||+|+|+ |.+|..++..++..|+ +|+++|+++.... ...+..... ..++.. ++
T Consensus 4 ~~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~ 77 (503)
T TIGR02279 4 NVVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VT 77 (503)
T ss_pred CccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eC
Confidence 4468999999 9999999999999999 9999999752110 011111110 012332 34
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCC
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEK 168 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~ 168 (209)
++ +++++||+||.++ .++.+..+.+...+.+.++.. .|++||.+.... +++..... .+.
T Consensus 78 ~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~-~IlasnTStl~i---~~iA~~~~--~p~ 136 (503)
T TIGR02279 78 DL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPAD-TIIASNTSSLSI---TAIAAGLA--RPE 136 (503)
T ss_pred CH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCC-eEEEECCCCCCH---HHHHHhcC--ccc
Confidence 66 5678999999984 345567777788888888654 346888887533 33333321 244
Q ss_pred cEEEEe
Q 028437 169 KLFGVT 174 (209)
Q Consensus 169 ~vig~~ 174 (209)
+++|++
T Consensus 137 r~~G~H 142 (503)
T TIGR02279 137 RVAGLH 142 (503)
T ss_pred ceEEEe
Confidence 666653
No 107
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.67 E-value=6.4e-08 Score=81.41 Aligned_cols=115 Identities=16% Similarity=0.096 Sum_probs=76.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
....++|+|+||+||||+||+..|+.+|+ +|..+|.... +....+.+......++.... +-.+..+.++|.|+++|
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~h-dv~~pl~~evD~IyhLA 99 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYFT-GRKENLEHWIGHPNFELIRH-DVVEPLLKEVDQIYHLA 99 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEecccc-cchhhcchhccCcceeEEEe-echhHHHHHhhhhhhhc
Confidence 34558999999999999999999999999 9999998532 11122233222222222111 11246788999999998
Q ss_pred CCCCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 105 GVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 105 g~~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
.....++ .+..+.+..|.-.+.++...+++.+ ++++.+|
T Consensus 100 apasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aS 140 (350)
T KOG1429|consen 100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLAS 140 (350)
T ss_pred cCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEee
Confidence 7543332 2344556677777788888877765 6777665
No 108
>PRK06194 hypothetical protein; Provisional
Probab=98.65 E-value=3.8e-07 Score=76.77 Aligned_cols=115 Identities=17% Similarity=0.166 Sum_probs=68.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEee----cCCchhhhcC-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM----GNDQLGQALE------- 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~~------- 95 (209)
++|+|+||+|++|++++..|+++|. +|+++|++.. .....++.... ..+..+. ..++++++++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQG--AEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999998 9999998642 12222332211 1121111 1122333333
Q ss_pred CCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHH----HHhhCCC-----eEEEEecCC
Q 028437 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSA----IAKYCPN-----AIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~----i~~~~p~-----~~viv~snP 147 (209)
..|+||++||..... ..+. ...+..|+.....+.+. +.+.+.. +.++++|..
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~ 149 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASM 149 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh
Confidence 479999999875321 1122 23466777666665555 5444332 567776643
No 109
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.65 E-value=1.6e-07 Score=79.68 Aligned_cols=102 Identities=20% Similarity=0.343 Sum_probs=68.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH---------HHhhcCCC-CC--------cceeEeecCCc
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV---------AADVGHIN-TR--------SEVAGYMGNDQ 89 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~---------~~dl~~~~-~~--------~~v~~~~~~~d 89 (209)
++||+|+|+ |.+|..++..++..|+ +|+++|+++.... ..++.+.. .. ..+.. +++
T Consensus 3 ~~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~ 76 (282)
T PRK05808 3 IQKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTD 76 (282)
T ss_pred ccEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCC
Confidence 358999999 9999999999999999 9999999752110 01111111 00 12222 346
Q ss_pred hhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCc
Q 028437 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNST 151 (209)
Q Consensus 90 ~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~ 151 (209)
+ +++++||+||.++ ..+....+++.+.+.++++...+ ++||.++..
T Consensus 77 ~-~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~i-l~s~ts~~~ 122 (282)
T PRK05808 77 L-DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAI-LATNTSSLS 122 (282)
T ss_pred H-HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcE-EEECCCCCC
Confidence 5 5689999999995 23456667888888888753333 378777753
No 110
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.64 E-value=4e-07 Score=85.35 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=71.9
Q ss_pred CeEEEEcCCCchHHHHHHHHH--hCCCccEEEEEecCCchhHHHhhcCCCCCcceeEee----c------CCchhhhcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMK--LNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM----G------NDQLGQALED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~--~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~----~------~~d~~~a~~~ 96 (209)
|||+|+||+||+|++++..|+ ..++ +|++++++.......++........++.+. . ..+++ .+++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~-~l~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA--TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA-ELGD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC--EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH-HhcC
Confidence 589999999999999999999 4677 999999964222221211100000111111 0 01222 2489
Q ss_pred CCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 97 SDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
+|+|||+|+.... ..+..++...|+..++++++.+.+... .+++++|
T Consensus 78 ~D~Vih~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~~-~~~v~~S 124 (657)
T PRK07201 78 IDHVVHLAAIYDL-TADEEAQRAANVDGTRNVVELAERLQA-ATFHHVS 124 (657)
T ss_pred CCEEEECceeecC-CCCHHHHHHHHhHHHHHHHHHHHhcCC-CeEEEEe
Confidence 9999999986432 234456778899999999999987643 3555554
No 111
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.64 E-value=2.2e-07 Score=78.94 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=69.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhh----cCCCCEEEEcCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQA----LEDSDVVIIPAGV 106 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a----~~~aD~Vi~~ag~ 106 (209)
|+|+||+|++|++++..|.+.|+ .+|.++++........++........+. ..+.++.. +.++|+|||+|+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI-TDILVVDNLRDGHKFLNLADLVIADYID---KEDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC-ceEEEEecCCCchhhhhhhheeeeccCc---chhHHHHHHhhccCCCCEEEECccc
Confidence 68999999999999999999995 2688888753211111111110000111 01122222 2589999999986
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
......+..+.+..|+..+.++++.+.+... +++++|.
T Consensus 77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~SS 114 (314)
T TIGR02197 77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYASS 114 (314)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEcc
Confidence 5333334556778999999999999987653 5666663
No 112
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.64 E-value=1.3e-07 Score=73.59 Aligned_cols=117 Identities=24% Similarity=0.371 Sum_probs=72.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCC--------CCcceeEeecCCchhhhcCCCCEEE
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN--------TRSEVAGYMGNDQLGQALEDSDVVI 101 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~--------~~~~v~~~~~~~d~~~a~~~aD~Vi 101 (209)
||+|+|| |..|.+++..|..+|+ +|.+|++++.......-.+.. .+..+. .++|++++++++|+|+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~---~t~dl~~a~~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIK---ATTDLEEALEDADIII 74 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEE---EESSHHHHHTT-SEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccc---cccCHHHHhCcccEEE
Confidence 8999999 9999999999999998 999999975211111111111 111222 2568999999999999
Q ss_pred EcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCC-CCcHHHHHHHHHHhCCCCCCcE
Q 028437 102 IPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPV-NSTVPIAAEVFKKAGTYNEKKL 170 (209)
Q Consensus 102 ~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~-~~~~~i~~~~~~~~~~~p~~~v 170 (209)
++. | ....+++++.+..+- ++..++.++.-- .....++++++.+. +|..++
T Consensus 75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~KG~~~~~~~~~~~~i~~~--~~~~~~ 127 (157)
T PF01210_consen 75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISATKGFEPGTLLLLSEVIEEI--LPIPRI 127 (157)
T ss_dssp E-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS-SEETTEEEEHHHHHHHH--HSSCGE
T ss_pred ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEecCCcccCCCccHHHHHHHH--hhhcce
Confidence 984 2 133467778888776 445555554322 11223556777664 344444
No 113
>PLN02240 UDP-glucose 4-epimerase
Probab=98.62 E-value=5.3e-07 Score=78.09 Aligned_cols=115 Identities=18% Similarity=0.139 Sum_probs=73.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hh---HHHhhcCCCCCcceeE----eecCCchhhhcC--C
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PG---VAADVGHINTRSEVAG----YMGNDQLGQALE--D 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~---~~~dl~~~~~~~~v~~----~~~~~d~~~a~~--~ 96 (209)
.+||+|+||+|++|++++..|++.|+ +|+++|+... .. ...+..... ...+.. +....+++++++ +
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDL-GDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhccc-CccceEEecCcCCHHHHHHHHHhCC
Confidence 46999999999999999999999998 9999987421 11 111111100 001111 111223444454 6
Q ss_pred CCEEEEcCCCCCCC-C-CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP-G-MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~-g-~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+|+||++|+..... . ....+++..|+....++++.+++.... +++++|.
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss 132 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCK-KLVFSSS 132 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcc
Confidence 89999999864321 1 234567889999999999998875433 5666653
No 114
>PRK12320 hypothetical protein; Provisional
Probab=98.59 E-value=3.6e-07 Score=86.34 Aligned_cols=101 Identities=14% Similarity=0.076 Sum_probs=69.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhhcCCCCEEEEcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
|||+|+||+||+|++++..|++.|+ +|+++|+.+.. ....... .+. ++.. ..+.++++++|+|||+++..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~ve-~v~~Dl~d-~~l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPRVD-YVCASLRN-PVLQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCCce-EEEccCCC-HHHHHHhcCCCEEEEcCccC
Confidence 5899999999999999999999999 99999985321 1111110 011 1111 12456678999999999753
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 108 ~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
. . +....|+..+.++++.+++.+. ++|++|.
T Consensus 72 ~--~----~~~~vNv~Gt~nLleAA~~~Gv--RiV~~SS 102 (699)
T PRK12320 72 T--S----APGGVGITGLAHVANAAARAGA--RLLFVSQ 102 (699)
T ss_pred c--c----chhhHHHHHHHHHHHHHHHcCC--eEEEEEC
Confidence 2 1 1124789999999999987653 5666663
No 115
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.59 E-value=2.5e-07 Score=78.87 Aligned_cols=117 Identities=15% Similarity=0.283 Sum_probs=72.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH-H-Hhhc----------CCCC---------CcceeEeecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-A-ADVG----------HINT---------RSEVAGYMGN 87 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~-~-~dl~----------~~~~---------~~~v~~~~~~ 87 (209)
.||+|+|+ |.+|..++..++..|+ +|+++|+++.... . ..+. +... ..++.. +
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~ 77 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRT---S 77 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEe---e
Confidence 58999999 9999999999999999 9999999752110 0 0111 1000 011221 3
Q ss_pred CchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCCcHHHHHHHHHHhCCCC
Q 028437 88 DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYN 166 (209)
Q Consensus 88 ~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p-~~~viv~snP~~~~~~i~~~~~~~~~~~p 166 (209)
+++ +++++||+||.++. .+.+..+++.+.+.++++ +++ ++||..... ++++..... .
T Consensus 78 ~~~-~~~~~aDlVieav~--------------e~~~~k~~~~~~l~~~~~~~~i--l~S~tsg~~---~~~la~~~~--~ 135 (291)
T PRK06035 78 TSY-ESLSDADFIVEAVP--------------EKLDLKRKVFAELERNVSPETI--IASNTSGIM---IAEIATALE--R 135 (291)
T ss_pred CCH-HHhCCCCEEEEcCc--------------CcHHHHHHHHHHHHhhCCCCeE--EEEcCCCCC---HHHHHhhcC--C
Confidence 455 67899999999952 223455777777887775 443 367776642 233333221 3
Q ss_pred CCcEEEE
Q 028437 167 EKKLFGV 173 (209)
Q Consensus 167 ~~~vig~ 173 (209)
++|++|+
T Consensus 136 ~~r~ig~ 142 (291)
T PRK06035 136 KDRFIGM 142 (291)
T ss_pred cccEEEE
Confidence 4566666
No 116
>PRK05865 hypothetical protein; Provisional
Probab=98.59 E-value=4.3e-07 Score=87.47 Aligned_cols=104 Identities=18% Similarity=0.106 Sum_probs=73.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhhcCCCCEEEEcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
|||+|+||+|++|++++..|+..|+ +|++++++.... +.. ... .+. ++...++++++++++|+|||+|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~~-~v~-~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WPS-SAD-FIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----ccc-Cce-EEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 5899999999999999999999999 999999863211 110 110 111 1111235667789999999998754
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC
Q 028437 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV 148 (209)
Q Consensus 108 ~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~ 148 (209)
. + ....|+..+.++++++++.+. .+++++|.+.
T Consensus 73 ~-~------~~~vNv~GT~nLLeAa~~~gv-kr~V~iSS~~ 105 (854)
T PRK05865 73 G-R------NDHINIDGTANVLKAMAETGT-GRIVFTSSGH 105 (854)
T ss_pred c-c------hHHHHHHHHHHHHHHHHHcCC-CeEEEECCcH
Confidence 2 1 357899999999999987653 3677777654
No 117
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.58 E-value=3.1e-07 Score=78.44 Aligned_cols=106 Identities=24% Similarity=0.302 Sum_probs=65.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH---------HHhhcCCCC-C-----cceeEeecCCc
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV---------AADVGHINT-R-----SEVAGYMGNDQ 89 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~---------~~dl~~~~~-~-----~~v~~~~~~~d 89 (209)
|.+..||+|+|+ |.+|..++..++..|+ +|+++|+++.... ..++.+... . ........+++
T Consensus 1 ~~~~~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 77 (295)
T PLN02545 1 MAEIKKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTN 77 (295)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCC
Confidence 344568999999 9999999999999998 9999999752110 011211110 0 00111111234
Q ss_pred hhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCC
Q 028437 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS 150 (209)
Q Consensus 90 ~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~ 150 (209)
. +++++||+||.++ .++.+....+.+.+.+.. +++ +++||.++.
T Consensus 78 ~-~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~--il~s~tS~i 122 (295)
T PLN02545 78 L-EELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSA--ILASNTSSI 122 (295)
T ss_pred H-HHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCc--EEEECCCCC
Confidence 4 6789999999995 223344556666677665 444 345777664
No 118
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.58 E-value=4.7e-07 Score=77.87 Aligned_cols=102 Identities=23% Similarity=0.327 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH-H--------HhhcCCCC---------CcceeEeecCCc
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-A--------ADVGHINT---------RSEVAGYMGNDQ 89 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~-~--------~dl~~~~~---------~~~v~~~~~~~d 89 (209)
+|||+|+|+ |.+|.+++..|++.|+ +|+++|+++.... . ..+..... ..++.. +.+
T Consensus 2 ~~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~ 75 (308)
T PRK06129 2 MGSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDS 75 (308)
T ss_pred CcEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECc
Confidence 468999998 9999999999999999 9999999752111 0 01211111 012222 357
Q ss_pred hhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 028437 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (209)
Q Consensus 90 ~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~ 150 (209)
+.+++++||+|+.+.. .+....+.+.+.+.+..++..+ +.||....
T Consensus 76 ~~~a~~~ad~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~i-i~ssts~~ 121 (308)
T PRK06129 76 LADAVADADYVQESAP--------------ENLELKRALFAELDALAPPHAI-LASSTSAL 121 (308)
T ss_pred HHHhhCCCCEEEECCc--------------CCHHHHHHHHHHHHHhCCCcce-EEEeCCCC
Confidence 7788999999999852 1223344555666666654433 35666553
No 119
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.57 E-value=3e-07 Score=78.30 Aligned_cols=101 Identities=20% Similarity=0.241 Sum_probs=63.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH-----HHhhc-----CCCC--------CcceeEeecCCch
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-----AADVG-----HINT--------RSEVAGYMGNDQL 90 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~-----~~dl~-----~~~~--------~~~v~~~~~~~d~ 90 (209)
.||+|+|+ |.+|..++..|++.|+ +|+++|+++.... ..++. .... ...+.. ++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 75 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL 75 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence 48999999 9999999999999999 9999999852110 00000 0000 011222 3467
Q ss_pred hhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 028437 91 GQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (209)
Q Consensus 91 ~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~ 150 (209)
++++++||+||.+.. .+....+.++..+.++++... ++++|.+..
T Consensus 76 ~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~-il~~~tSt~ 120 (288)
T PRK09260 76 KAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAEC-YIATNTSTM 120 (288)
T ss_pred HHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCc-EEEEcCCCC
Confidence 789999999999952 123344555566766664332 245565553
No 120
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.56 E-value=7.8e-07 Score=81.39 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=68.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH-HHh--------hc---CCCC--CcceeEeecCCchhh
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-AAD--------VG---HINT--RSEVAGYMGNDQLGQ 92 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~-~~d--------l~---~~~~--~~~v~~~~~~~d~~~ 92 (209)
+.|||+|+|+ |.+|+.++..|+..|+ +|+++|+++.... ..+ +. .... ...+.. ++++++
T Consensus 3 ~i~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~e 76 (495)
T PRK07531 3 MIMKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAE 76 (495)
T ss_pred CcCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHH
Confidence 4469999999 9999999999999999 9999999752211 000 00 1000 011222 356778
Q ss_pred hcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCc
Q 028437 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNST 151 (209)
Q Consensus 93 a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~ 151 (209)
++++||+|+.++. ++.+..+.+...+.+.+++. .++.||.++..
T Consensus 77 a~~~aD~Vieavp--------------e~~~vk~~l~~~l~~~~~~~-~iI~SsTsgi~ 120 (495)
T PRK07531 77 AVAGADWIQESVP--------------ERLDLKRRVLAEIDAAARPD-ALIGSSTSGFL 120 (495)
T ss_pred HhcCCCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCC-cEEEEcCCCCC
Confidence 9999999999841 22344556666677776544 34678777753
No 121
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.53 E-value=1.9e-06 Score=70.53 Aligned_cols=100 Identities=23% Similarity=0.221 Sum_probs=62.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcC----CCCCcceeEeecCCchhhhcCCCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGH----INTRSEVAGYMGNDQLGQALEDSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~----~~~~~~v~~~~~~~d~~~a~~~aD~Vi~ 102 (209)
|||+|+|++|.+|+.++..|.+.|+ +|.++++++... ...+..+ ......+.. .+.+++++++|+||+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~----~~~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG----ADNAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE----eChHHHHhcCCEEEE
Confidence 6899998559999999999999998 999999875221 1111111 111111111 134678899999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~ 150 (209)
++.. ....++++.+....++..+|-++||...
T Consensus 75 avp~----------------~~~~~~l~~l~~~l~~~vvI~~~ngi~~ 106 (219)
T TIGR01915 75 AVPW----------------DHVLKTLESLRDELSGKLVISPVVPLAS 106 (219)
T ss_pred ECCH----------------HHHHHHHHHHHHhccCCEEEEeccCcee
Confidence 9631 1123333444333334567788898763
No 122
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.53 E-value=1.1e-06 Score=73.87 Aligned_cols=96 Identities=20% Similarity=0.223 Sum_probs=66.4
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC-CCCEEEEcCCCCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE-DSDVVIIPAGVPRK 109 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~-~aD~Vi~~ag~~~~ 109 (209)
|+|+|+||+||++|+..|.+.|| +|+++-|++.+... ..+.... .. +.+++... ++|+||+.||.+-.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~~--~~~~~v~-~~------~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKASQ--NLHPNVT-LW------EGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchhh--hcCcccc-cc------chhhhcccCCCCEEEECCCCccc
Confidence 68999999999999999999999 99999997632221 1111100 11 12233333 79999999998742
Q ss_pred CC----CChhHHHHHHHHHHHHHHHHHHhhCC
Q 028437 110 PG----MTRDDLFNINAGIVKDLCSAIAKYCP 137 (209)
Q Consensus 110 ~g----~~r~~~~~~N~~~~~~i~~~i~~~~p 137 (209)
.. .......+.-+..++.+++.+.+...
T Consensus 70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~ 101 (297)
T COG1090 70 ERRWTEKQKEEIRQSRINTTEKLVELIAASET 101 (297)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhccC
Confidence 22 12445566678899999999997653
No 123
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.51 E-value=1.3e-06 Score=75.01 Aligned_cols=104 Identities=19% Similarity=0.313 Sum_probs=64.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH--HHh----hc---CCCC----CcceeEeecCCchhh
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV--AAD----VG---HINT----RSEVAGYMGNDQLGQ 92 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~--~~d----l~---~~~~----~~~v~~~~~~~d~~~ 92 (209)
.+.+||+|+|+ |.+|..++..|+..|+ +|+++|+++.... ... +. .... ...+.. ++++++
T Consensus 2 ~~~~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~ 75 (311)
T PRK06130 2 NPIQNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM---EAGLAA 75 (311)
T ss_pred CCccEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE---eCCHHH
Confidence 34579999999 9999999999999999 9999999752110 000 00 0000 001222 346677
Q ss_pred hcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 028437 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (209)
Q Consensus 93 a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~ 150 (209)
++++||+||.+... .......+.+.+....+.. .+++||.++.
T Consensus 76 ~~~~aDlVi~av~~--------------~~~~~~~v~~~l~~~~~~~-~ii~s~tsg~ 118 (311)
T PRK06130 76 AVSGADLVIEAVPE--------------KLELKRDVFARLDGLCDPD-TIFATNTSGL 118 (311)
T ss_pred HhccCCEEEEeccC--------------cHHHHHHHHHHHHHhCCCC-cEEEECCCCC
Confidence 89999999999521 1233455556666655433 2345666664
No 124
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.50 E-value=2.7e-06 Score=70.40 Aligned_cols=124 Identities=19% Similarity=0.236 Sum_probs=70.3
Q ss_pred ccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhh---
Q 028437 19 RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQA--- 93 (209)
Q Consensus 19 ~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a--- 93 (209)
|+++.++ +.++++|+||+|++|+.++..|+++|+ +|+++++++... ...++.........-++...+++.++
T Consensus 3 ~~~~~~~-~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (264)
T PRK12829 3 IDLLKPL-DGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDT 79 (264)
T ss_pred hhHhhcc-CCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHH
Confidence 3444443 336999999999999999999999999 999999974211 11112111000000001111122222
Q ss_pred ----cCCCCEEEEcCCCCCCCC----CC---hhHHHHHHHHHHHHHHHHHHhh---CCC-eEEEEec
Q 028437 94 ----LEDSDVVIIPAGVPRKPG----MT---RDDLFNINAGIVKDLCSAIAKY---CPN-AIVNMIS 145 (209)
Q Consensus 94 ----~~~aD~Vi~~ag~~~~~g----~~---r~~~~~~N~~~~~~i~~~i~~~---~p~-~~viv~s 145 (209)
+.++|+||+++|.....+ .+ ..+.+..|......+.+.+.+. ... .++++.|
T Consensus 80 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~s 146 (264)
T PRK12829 80 AVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALS 146 (264)
T ss_pred HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 347899999998752221 11 2344667777766666665332 222 4566555
No 125
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.48 E-value=8.2e-07 Score=73.44 Aligned_cols=114 Identities=19% Similarity=0.288 Sum_probs=69.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEee----cCCchhhhc-------C
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM----GNDQLGQAL-------E 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~-------~ 95 (209)
++++|+||+|++|++++..|++.|+ +|+++++++. .....++.+... ++..+. ...++++++ .
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAGG--KAIGVAMDVTNEDAVNAGIDKVAERFG 83 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcCc--eEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999 9999999752 122223332211 111111 111222222 3
Q ss_pred CCCEEEEcCCCCCCC---CC---ChhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKP---GM---TRDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~---~r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
+.|+||+++|..... .. ...+.+..|+.. ++.+.+.+.+..+...++++|.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss 144 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGS 144 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcc
Confidence 589999999874311 11 123445567766 6677777733344556777653
No 126
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.46 E-value=2.6e-06 Score=71.65 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=69.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeE----eecCCchhhhc-------CC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAG----YMGNDQLGQAL-------ED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~----~~~~~d~~~a~-------~~ 96 (209)
+++|+|+||+|++|++++..|++.|+ +|+++++++... .++..... ..+.. +...+++.+++ ..
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALHP-DRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 45799999999999999999999999 999999974221 12221110 01111 11111222222 35
Q ss_pred CCEEEEcCCCCCC---CCCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRK---PGMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~---~g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
.|+||+++|.... ...+. .+.+..|+....++.+.+.++ .....+|++|.
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS 137 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS 137 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEec
Confidence 8999999987431 11222 344778888887777775442 23346777764
No 127
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.46 E-value=1.8e-06 Score=73.25 Aligned_cols=117 Identities=21% Similarity=0.134 Sum_probs=78.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh---HHHhhcCCCCCcceeE-eecCCchhhhcC--CCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG---VAADVGHINTRSEVAG-YMGNDQLGQALE--DSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~---~~~dl~~~~~~~~v~~-~~~~~d~~~a~~--~aD~Vi~ 102 (209)
|+|+|+|++||||++.+..++.+..-.+|+.+|.---.+ ...++.+.+....++. +.+...+.+.++ +.|.|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 589999999999999999888876544688888742112 2234444332222222 111223445566 6899999
Q ss_pred cCCCCCC--CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 103 PAGVPRK--PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 103 ~ag~~~~--~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
.|+-... .=....+|++.|+-.+..++++++++...-+++.+|
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HIS 125 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIS 125 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEec
Confidence 9865421 113467899999999999999999998654565554
No 128
>PLN02996 fatty acyl-CoA reductase
Probab=98.46 E-value=3.7e-06 Score=76.92 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=73.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEecCCc--hh--H-HHhhcCCC------------C----CcceeEeec
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANT--PG--V-AADVGHIN------------T----RSEVAGYMG 86 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g-~~~ev~l~D~~~~--~~--~-~~dl~~~~------------~----~~~v~~~~~ 86 (209)
++|.|||||||+|++++..|+..+ -+.+|+++.|... .. . ..++...+ . ..++..+.+
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G 91 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG 91 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence 489999999999999999988754 3568888888531 00 0 01111100 0 012222221
Q ss_pred C----------Cc-hhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 87 N----------DQ-LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 87 ~----------~d-~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
. .+ +++.++++|+|||+|+.... ..+..+....|+..+.++++.+++...-.+++.+|
T Consensus 92 Dl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS 160 (491)
T PLN02996 92 DISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVS 160 (491)
T ss_pred ccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 1 11 34567899999999986542 33456678899999999999998753222455554
No 129
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.5e-06 Score=72.16 Aligned_cols=117 Identities=29% Similarity=0.357 Sum_probs=69.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhc--------CCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQAL--------EDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~--------~~aD 98 (209)
++++|+||+|++|..++..|+++|. +|+++++++... ...++.........-++....++++++ ...|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 4799999999999999999999998 999999875211 111222111100000011111223332 3569
Q ss_pred EEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 99 VVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 99 ~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
+||+++|...... .+ ..+.+..|+.....+.+.+.++ .+...++++|..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~ 137 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSA 137 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 9999998753211 11 3345777888777776665432 344566666544
No 130
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.44 E-value=5.4e-06 Score=69.41 Aligned_cols=113 Identities=14% Similarity=0.048 Sum_probs=69.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEee----cCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM----GNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~~a 97 (209)
++++|+||+|++|++++..|++.|+ +|.++++++.. ..++.... ...+..+. ..++++++ +.+.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999998 99999986421 11111110 00111111 11112222 3468
Q ss_pred CEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 98 DVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
|+||+++|...... .+ ....+..|+.....+++.+.++ ....+++++|.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS 135 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSS 135 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 99999998754221 11 2345678888888888887432 23356777764
No 131
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.44 E-value=1.5e-06 Score=72.10 Aligned_cols=112 Identities=18% Similarity=0.156 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee--Eeec-CCchhhhc-CCCCEEEE
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA--GYMG-NDQLGQAL-EDSDVVII 102 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~--~~~~-~~d~~~a~-~~aD~Vi~ 102 (209)
.+|||+|+||+|++|+.++..|++.|+ +|+++.+++..... .+.... ...+. ++.. ..++.+++ .++|+||+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~-~~~~~~-~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKT-SLPQDP-SLQIVRADVTEGSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHH-hcccCC-ceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence 347999999999999999999999998 99988876422111 111110 01111 1111 12345666 68999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
++|.....+ ..+....|.....++++.+.+... .+++++|
T Consensus 92 ~~g~~~~~~--~~~~~~~n~~~~~~ll~a~~~~~~-~~iV~iS 131 (251)
T PLN00141 92 ATGFRRSFD--PFAPWKVDNFGTVNLVEACRKAGV-TRFILVS 131 (251)
T ss_pred CCCCCcCCC--CCCceeeehHHHHHHHHHHHHcCC-CEEEEEc
Confidence 987643211 111234566677888888876543 3566654
No 132
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.44 E-value=2e-07 Score=79.34 Aligned_cols=96 Identities=24% Similarity=0.291 Sum_probs=62.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC--CCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~--~aD~Vi~~ag~ 106 (209)
|||+|+||+|++|+++...|.+.|+ +++.+++.. .|+.+.. .+.+.++ ..|+||++|+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~------------~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPE------------AVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHH------------HHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHH------------HHHHHHHHhCCCeEecccee
Confidence 7999999999999999999999998 888887641 2222221 1222222 47999999987
Q ss_pred CCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 107 PRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 107 ~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
..... .++.+....|+....++++.+.+. +.++|.+|
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~S 100 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEACKER--GARLIHIS 100 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEE
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEee
Confidence 53111 245567789999999999999875 35666665
No 133
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=98.41 E-value=6.1e-06 Score=73.77 Aligned_cols=118 Identities=25% Similarity=0.307 Sum_probs=70.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC----------------CcceeEeecCCchhh
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT----------------RSEVAGYMGNDQLGQ 92 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~----------------~~~v~~~~~~~d~~~ 92 (209)
|||+|+|. |.+|..++..|++.|+ +|+++|+++.. ..++..... ..++.. ++++.+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~ 72 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEK--VDKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED 72 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHH--HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence 58999999 9999999999999999 99999997532 222222110 011222 346677
Q ss_pred hcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEec-CCCCCcHHHHHHHHH
Q 028437 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMIS-NPVNSTVPIAAEVFK 160 (209)
Q Consensus 93 a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~s-nP~~~~~~i~~~~~~ 160 (209)
++++||+||++.+.+..... .-+...+.+.++.+.+.. +...++..| -|.++.-.+...++.
T Consensus 73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~ 136 (411)
T TIGR03026 73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILE 136 (411)
T ss_pred HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHH
Confidence 89999999999887653321 112334445555555443 444444443 444443333333433
No 134
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.39 E-value=2.2e-06 Score=70.44 Aligned_cols=114 Identities=16% Similarity=0.258 Sum_probs=70.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch---hHHHhhcCCCCCcceeE----eecCCchhhhc-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHINTRSEVAG----YMGNDQLGQAL------- 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~---~~~~dl~~~~~~~~v~~----~~~~~d~~~a~------- 94 (209)
++++|+||+|++|.+++..|++.|+ +|++++++... ....++..... .+.. +...+++++++
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAGG--RASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 5899999999999999999999998 99998885321 11122322110 1111 11111222222
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
.+.|+||+++|.......+..+.+..|+....++++.+.++. ..++++++|.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 368999999876432222233455678888888888887764 3456777754
No 135
>PLN02253 xanthoxin dehydrogenase
Probab=98.39 E-value=1.4e-05 Score=67.11 Aligned_cols=114 Identities=18% Similarity=0.294 Sum_probs=69.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhhcC------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQALE------ 95 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~------ 95 (209)
.++++|+||+|.+|.+++..|++.|. +|+++|+++.. ....++... .++.. +...++++++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGGE---PNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcCC---CceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999998 99999986421 112223211 11111 111122333333
Q ss_pred -CCCEEEEcCCCCCCC-----CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 -DSDVVIIPAGVPRKP-----GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 -~aD~Vi~~ag~~~~~-----g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..|++|++||..... ..+ ....+..|+.....+++.+.+. ...+.+++++.
T Consensus 93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS 155 (280)
T PLN02253 93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCS 155 (280)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecC
Confidence 689999999875321 112 2345777877766666655433 23456677664
No 136
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.38 E-value=3.5e-06 Score=70.27 Aligned_cols=113 Identities=18% Similarity=0.176 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCC-CCcceeEeecCCchhhhcC-------CCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN-TRSEVAGYMGNDQLGQALE-------DSD 98 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~-~~~~v~~~~~~~d~~~a~~-------~aD 98 (209)
+.++|+|+||+|++|++++..|+++|. +|++.++++.... ...... ...+ +...++++++++ ..|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~D---~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAA--PIPGVELLELD---VTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhcc--ccCCCeeEEee---cCCHHHHHHHHHHHHHhCCCCC
Confidence 345899999999999999999999998 9999999742111 111110 0011 111223334443 469
Q ss_pred EEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHH----HhhCCCeEEEEecCC
Q 028437 99 VVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAI----AKYCPNAIVNMISNP 147 (209)
Q Consensus 99 ~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i----~~~~p~~~viv~snP 147 (209)
++|+++|...... .+ ....+..|......+.+.+ ++.. .++++++|..
T Consensus 76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~ 133 (270)
T PRK06179 76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSV 133 (270)
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCc
Confidence 9999998754221 11 2345667776666555554 4333 3567776653
No 137
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.38 E-value=3.2e-06 Score=71.09 Aligned_cols=114 Identities=12% Similarity=0.102 Sum_probs=67.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhc--------CCCCE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL--------EDSDV 99 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~--------~~aD~ 99 (209)
+++|+|+||+|.+|.+++..|++.|. +|++.++++.. ..++.........-++...+++++++ ...|+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~--~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW--RVFATCRKEED--VAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 35799999999999999999999998 99999997421 11222211110000111111222222 24699
Q ss_pred EEEcCCCCCCCC---CC---hhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 100 VIIPAGVPRKPG---MT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 100 Vi~~ag~~~~~g---~~---r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
+|++||...... .+ ..+.+..|+.. ++.+++.+++.. .++++++|.
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS 135 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence 999998653211 12 23456677766 566667666543 346777754
No 138
>PRK06182 short chain dehydrogenase; Validated
Probab=98.37 E-value=4.3e-06 Score=69.97 Aligned_cols=114 Identities=15% Similarity=0.120 Sum_probs=67.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC-------CCCEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE-------DSDVV 100 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~-------~aD~V 100 (209)
.++|+|+||+|.+|.+++..|++.|+ +|++.++++.. ..++.........-++...++++++++ +.|++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~--l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDK--MEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 35899999999999999999999999 99999987421 112221111100011111123333333 78999
Q ss_pred EEcCCCCCCC---CC---ChhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 101 IIPAGVPRKP---GM---TRDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 101 i~~ag~~~~~---g~---~r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
|+++|..... .. +....+..|+.. ++.+++.+++.. .++++++|.
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS 133 (273)
T PRK06182 79 VNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISS 133 (273)
T ss_pred EECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcc
Confidence 9999875321 11 123445667654 556666666543 346666654
No 139
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.37 E-value=2.9e-06 Score=72.10 Aligned_cols=110 Identities=19% Similarity=0.106 Sum_probs=70.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch-h-HHHhhcCCCCCcceeEe----ecCCchhhhcC--CCCEEE
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-G-VAADVGHINTRSEVAGY----MGNDQLGQALE--DSDVVI 101 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~-~-~~~dl~~~~~~~~v~~~----~~~~d~~~a~~--~aD~Vi 101 (209)
||+|+||+|++|..++..|++.|+ +|+++|+.... . ....+.... .+..+ ....+++++++ +.|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERIT---RVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhcccc---ceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 689999999999999999999998 89988764211 1 111111110 11111 11123445554 689999
Q ss_pred EcCCCCCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 102 IPAGVPRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 102 ~~ag~~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
+++|...... .+..+.+..|+....++++.+.+.... .++++|
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~s 120 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVK-KFIFSS 120 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCC-EEEEec
Confidence 9998653221 234456788999999999998876533 455554
No 140
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.35 E-value=2.8e-06 Score=80.27 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=64.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC--CCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~--~aD~Vi~~a 104 (209)
+.|||+|+||+||+|++|+..|...|+ ++... . .++.+.. .+...++ +.|+|||+|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~~-~-------~~l~d~~------------~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEYG-K-------GRLEDRS------------SLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCC--eEEee-c-------cccccHH------------HHHHHHHhhCCCEEEECC
Confidence 347999999999999999999999887 76321 1 0111110 1122222 689999999
Q ss_pred CCCCCCC-----CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 028437 105 GVPRKPG-----MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 144 (209)
Q Consensus 105 g~~~~~g-----~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~ 144 (209)
+....+. .+..+.+..|+..+.++++.+++.+. +++++
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~--~~v~~ 479 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL--LMMNF 479 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC--eEEEE
Confidence 8653221 24567788999999999999998754 34444
No 141
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.34 E-value=1.5e-06 Score=73.64 Aligned_cols=95 Identities=13% Similarity=0.099 Sum_probs=64.9
Q ss_pred EEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC--CCCEEEEcCCCCCC
Q 028437 32 AVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE--DSDVVIIPAGVPRK 109 (209)
Q Consensus 32 ~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~--~aD~Vi~~ag~~~~ 109 (209)
+|+||+||+|++|+..|+..|+ +++++.... ..|+.+. .++++.++ +.|+|||+|+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~----~~Dl~~~------------~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF--TNLVLRTHK----ELDLTRQ------------ADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC--cEEEeeccc----cCCCCCH------------HHHHHHHhccCCCEEEEeeeeecc
Confidence 4899999999999999999998 666554321 1122221 23444444 57999999976421
Q ss_pred ---CCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 110 ---PGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 110 ---~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
...+..+++..|...+.++++.+++.... ++|++|
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~i~~S 100 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVK-KLLFLG 100 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC-eEEEeC
Confidence 12345567889999999999999986533 455554
No 142
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.33 E-value=3.8e-06 Score=68.43 Aligned_cols=115 Identities=20% Similarity=0.296 Sum_probs=68.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeE----eecCCchhhh-------c
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAG----YMGNDQLGQA-------L 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~----~~~~~d~~~a-------~ 94 (209)
+++|+|+||+|++|..++..|+++|+ +|.++++++... ...++..... .+.. +....++.++ +
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAAGG--EARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999 899999975321 1222221111 1111 1111122222 3
Q ss_pred CCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
...|.||+++|..... ..+ ..+.+..|+.....+.+.+.++ ....+++++|.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss 141 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISS 141 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 4569999998764221 112 2334667777777777666432 23346776663
No 143
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.33 E-value=3.2e-06 Score=71.71 Aligned_cols=95 Identities=24% Similarity=0.275 Sum_probs=69.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCC--CCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALED--SDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~--aD~Vi~~ag~ 106 (209)
|||+|+|++|++|+.|+..|. .+. +|+..++.. .|+.+.+ .+.+.++. -|+||++|+.
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence 579999999999999999887 556 888887743 3444332 23455554 4999999987
Q ss_pred CCCCC--CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 107 PRKPG--MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 107 ~~~~g--~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
..... .+++.-+..|.....++++++++.+ +++|.+|
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiS 99 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHIS 99 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEee
Confidence 65332 3455667899999999999999864 3455554
No 144
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.33 E-value=6.1e-06 Score=69.49 Aligned_cols=121 Identities=16% Similarity=0.184 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCC-CCcceeE--eecCCchhh-------h
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHIN-TRSEVAG--YMGNDQLGQ-------A 93 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~-~~~~v~~--~~~~~d~~~-------a 93 (209)
.+++.++|||||+.||..++..|+.+|+ +|+|+.|++ +.....++.+.. ..+.+.. +..+++++. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 3456899999999999999999999999 999999975 233344455432 1111111 111222222 1
Q ss_pred cCCCCEEEEcCCCCCCCC------CChhHHHHHHHHHHH----HHHHHHHhhCCCeEEEEecCCCC
Q 028437 94 LEDSDVVIIPAGVPRKPG------MTRDDLFNINAGIVK----DLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~~g------~~r~~~~~~N~~~~~----~i~~~i~~~~p~~~viv~snP~~ 149 (209)
....|+.|+.||...... .+..+++.-|+.... .+++.|.+. ..+.||+++.-++
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag 146 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAG 146 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhh
Confidence 236899999999864221 234567777865444 455555543 3456777764433
No 145
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.32 E-value=5.4e-06 Score=67.31 Aligned_cols=117 Identities=18% Similarity=0.172 Sum_probs=68.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEeecCCchhhh-------cCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~~~~d~~~a-------~~~aD 98 (209)
.++|+|+||+|++|+.++..|+++|+ +|+++++++.+ ....++.........-++...++++++ +.++|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 35899999999999999999999998 99999997522 112222221111000011111222222 33689
Q ss_pred EEEEcCCCCCCCC---CCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 99 VVIIPAGVPRKPG---MTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~~g---~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+||+++|...... .+. .+.+..|......+++.+.+. .+..+++++|.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 9999988642111 122 233556777666766665432 34456777664
No 146
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.32 E-value=1.6e-05 Score=65.74 Aligned_cols=114 Identities=20% Similarity=0.262 Sum_probs=69.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCccee-EeecCCchhhh-------cCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVA-GYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~-~~~~~~d~~~a-------~~~aD 98 (209)
++++|+||+|++|.+++..|+++|+ +|+++|++.... ...++.... . .+. ++...++.+++ +...|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA-I-AVSLDVTRQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce-E-EEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999999999 999999975321 112222110 0 000 01111122232 34689
Q ss_pred EEEEcCCCCCCC---CC---ChhHHHHHHHHHHHHHHHHHHhh----CCCeEEEEecC
Q 028437 99 VVIIPAGVPRKP---GM---TRDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~~---g~---~r~~~~~~N~~~~~~i~~~i~~~----~p~~~viv~sn 146 (209)
++|+++|..... .. +..+.+..|+.....+.+.+.++ ...+.++++|.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 140 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS 140 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999999864211 11 23345678888777777776543 23456777765
No 147
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.32 E-value=1.6e-06 Score=71.09 Aligned_cols=94 Identities=18% Similarity=0.170 Sum_probs=63.8
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCCCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKP 110 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~~~ 110 (209)
|+|+||+|.+|++++..|++.++ +|.++-|+........+...........+...+++.++++|+|.||++.+... +
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-~ 77 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-P 77 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-C
T ss_pred CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch-h
Confidence 79999999999999999999888 99999997643333344443321100011122457889999999999876432 1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhhC
Q 028437 111 GMTRDDLFNINAGIVKDLCSAIAKYC 136 (209)
Q Consensus 111 g~~r~~~~~~N~~~~~~i~~~i~~~~ 136 (209)
.-.+...++++++++.+
T Consensus 78 ---------~~~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 78 ---------SELEQQKNLIDAAKAAG 94 (233)
T ss_dssp ---------CHHHHHHHHHHHHHHHT
T ss_pred ---------hhhhhhhhHHHhhhccc
Confidence 12345577888888876
No 148
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.32 E-value=2.1e-05 Score=64.51 Aligned_cols=117 Identities=19% Similarity=0.123 Sum_probs=70.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc----CCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL----EDS 97 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~----~~a 97 (209)
|++|+|+||+|++|..++..|+++|+ +|+++++++.. ....++.... ..++..+. ...++++.+ +..
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALP 77 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence 35899999999999999999999998 99999997521 1122222111 01121111 112233333 245
Q ss_pred CEEEEcCCCCCCC---CCChh---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 98 DVVIIPAGVPRKP---GMTRD---DLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 98 D~Vi~~ag~~~~~---g~~r~---~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
|++|+++|..... ..+.+ +.+..|+.....+.+.+.++ ...+.++++|..
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 136 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSV 136 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 9999998864211 22222 34667887777777666553 234567777643
No 149
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.32 E-value=4.6e-06 Score=67.98 Aligned_cols=114 Identities=19% Similarity=0.173 Sum_probs=68.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEe----ecCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGY----MGNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~~ 95 (209)
++|+|+||+|.+|+.++..|++.|. +|+++++++... ...++.... .+..+ ....++.+. +.
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNKG---NVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhccC---cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999998 999999875221 122332211 11111 111122222 34
Q ss_pred CCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHHHHhh--CCCeEEEEecCC
Q 028437 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY--CPNAIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~i~~~--~p~~~viv~snP 147 (209)
.+|+||+++|..... ..+. .+.+..|+.....+.+.+.+. .....++++|..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 789999998864321 1122 234566776666666555433 234567777654
No 150
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.32 E-value=8.4e-06 Score=70.21 Aligned_cols=114 Identities=12% Similarity=0.078 Sum_probs=72.2
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH----H-Hhhc-----CCCCC-cceeEeecC----------C
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV----A-ADVG-----HINTR-SEVAGYMGN----------D 88 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~----~-~dl~-----~~~~~-~~v~~~~~~----------~ 88 (209)
+|+|+||+|++|++++..|++.|+..+|+++.+...... . ..+. +.... ..+..+.+. .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999999999999999999985338999988642111 0 0011 00000 122222111 1
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
++.+..+++|.||++|+.... ..+..++...|+..+.++++.+.+.... .++++|
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~-~~v~iS 135 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGRAK-PLHYVS 135 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCCCc-eEEEEc
Confidence 234556789999999886432 2334566778999999999998875443 355555
No 151
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.32 E-value=2.2e-06 Score=67.04 Aligned_cols=65 Identities=23% Similarity=0.341 Sum_probs=47.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|+||+++|. |.+|+.++..|+..|+ +|+.||+++. ...++.+.. ... ..++++++++||+|+.+.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~~--~~~~~~~~g----~~~---~~s~~e~~~~~dvvi~~v 65 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSPE--KAEALAEAG----AEV---ADSPAEAAEQADVVILCV 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSHH--HHHHHHHTT----EEE---ESSHHHHHHHBSEEEE-S
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccchh--hhhhhHHhh----hhh---hhhhhhHhhcccceEeec
Confidence 579999999 9999999999999999 9999999742 233334332 222 236788999999999984
No 152
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.31 E-value=2e-05 Score=64.42 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeEee----cCCchhhhc-----
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM----GNDQLGQAL----- 94 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~----- 94 (209)
+.++|+|+||+|.+|++++..|+++|+ +++++.++.. .....++..... ++..+. ..+++++++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAGG--RAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999998 8888776431 111222222111 111111 111233333
Q ss_pred --CCCCEEEEcCCCCCCCC---C---ChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 95 --EDSDVVIIPAGVPRKPG---M---TRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 95 --~~aD~Vi~~ag~~~~~g---~---~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
.+.|+||+++|...... . +....+..|+.....+.+.+.+.. +..+++++|.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 36899999998743111 1 123346678777777776665542 4457777764
No 153
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.31 E-value=8.2e-06 Score=76.22 Aligned_cols=118 Identities=19% Similarity=0.120 Sum_probs=73.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCch--h--HH-HhhcCC------------C----CCcceeEe
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTP--G--VA-ADVGHI------------N----TRSEVAGY 84 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~--~--~~-~dl~~~------------~----~~~~v~~~ 84 (209)
+.++|.|||||||+|..|+..|++.+. +.+|+++.+.... + .. .++.+. . ...++..+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 346999999999999999999997654 5688998885311 0 00 111110 0 01122222
Q ss_pred ec----C------CchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 85 MG----N------DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 85 ~~----~------~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
.+ . .+.+...+++|+|||+|+... ...+..+....|+..+.++++.+.+......++.+|
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vS 267 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVS 267 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEcc
Confidence 11 1 123344568999999998653 234556678899999999999998753323455544
No 154
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.30 E-value=2.7e-06 Score=72.87 Aligned_cols=113 Identities=16% Similarity=0.082 Sum_probs=74.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC-----chhHHHhhcCCCCCcceeE----eecCCchhhhcC--C
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-----TPGVAADVGHINTRSEVAG----YMGNDQLGQALE--D 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~-----~~~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~--~ 96 (209)
.++|+||||+|+||+|.+..|+.+|+ +|+++|+.. +-.....+.+... .+.. +.+...+++.++ .
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~~~--~v~f~~~Dl~D~~~L~kvF~~~~ 77 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGEGK--SVFFVEGDLNDAEALEKLFSEVK 77 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCCCC--ceEEEEeccCCHHHHHHHHhhcC
Confidence 35899999999999999999999999 999999842 1111223333211 1111 111123444443 4
Q ss_pred CCEEEEcCCCCCCC-C-CChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 97 SDVVIIPAGVPRKP-G-MTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 97 aD~Vi~~ag~~~~~-g-~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
-|-|+|.|+..... . +.+..+...|+-.+.++++.|++++ ...++..|
T Consensus 78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~ss 127 (343)
T KOG1371|consen 78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSS 127 (343)
T ss_pred CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEec
Confidence 68999998764321 1 2456788999999999999999987 33444443
No 155
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.30 E-value=1.6e-05 Score=65.60 Aligned_cols=115 Identities=14% Similarity=0.128 Sum_probs=65.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH--HHhhcCCCCCcceeE-eecCCchhhh-------cCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV--AADVGHINTRSEVAG-YMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~--~~dl~~~~~~~~v~~-~~~~~d~~~a-------~~~aD 98 (209)
|+|+|+||+|++|..++..|++.|+ +|+++++++.... ..++.. ... .+.. +...++++++ +.++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~Dl~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQELKDELGD-NLY-IAQLDVRNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcc-ceE-EEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999998 9999999752111 111111 100 0000 1011122222 34799
Q ss_pred EEEEcCCCCC--CC--CCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 99 VVIIPAGVPR--KP--GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 99 ~Vi~~ag~~~--~~--g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
.||+++|... .+ ..+. .+.+..|+.....+.+.+.++ .....++++|..
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~ 135 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGST 135 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCc
Confidence 9999998642 11 1222 334666766644444444332 233567777654
No 156
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.30 E-value=3e-05 Score=63.93 Aligned_cols=114 Identities=18% Similarity=0.182 Sum_probs=67.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEE-ecCCc--hhHHHhhcCCCCCcceeE----eecCCchhhhcC------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALY-DIANT--PGVAADVGHINTRSEVAG----YMGNDQLGQALE------ 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~-D~~~~--~~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~------ 95 (209)
++|+|+||+|++|++++..|+++|. +|.+. .++.. .....++..... .+.. +...+++.++++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNGG--KAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999998 88775 44321 111122221110 1111 111112222222
Q ss_pred -------CCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 96 -------DSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 96 -------~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
+.|++|+++|...... .+ ....+..|+.....+.+.+.++. ..+.++++|.
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS 147 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISS 147 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 5899999998753211 11 13345678888888888877653 2346666654
No 157
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.30 E-value=2.2e-05 Score=64.22 Aligned_cols=116 Identities=18% Similarity=0.238 Sum_probs=69.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc-------C
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL-------E 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~-------~ 95 (209)
++++|+|++|.+|..++..|++.|+ +|+++++++.. ....++.... ..+..+. ...++++++ .
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAYG--VKVVIATADVSDYEEVTAAIEQLKNELG 83 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999998 99999997421 1122332211 1121111 111233333 3
Q ss_pred CCCEEEEcCCCCCCCC---CCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCC
Q 028437 96 DSDVVIIPAGVPRKPG---MTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP~ 148 (209)
++|+||+++|...... .+. .+.+..|+.....+.+.+.++ .....++++|...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~ 145 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTA 145 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchh
Confidence 7899999998753211 122 344677777666666665543 2234666666543
No 158
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.30 E-value=1.7e-05 Score=65.17 Aligned_cols=116 Identities=20% Similarity=0.146 Sum_probs=69.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCc-ceeE-eecCCchhh-------hcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRS-EVAG-YMGNDQLGQ-------ALEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~-~v~~-~~~~~d~~~-------a~~~a 97 (209)
++++|+||+|++|.+++..|++.|+ +|+++++++.. ....++.+..... .+.. +...+++++ .+...
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999998 99999997421 1122222211000 0110 111111222 22468
Q ss_pred CEEEEcCCCCCC----C--CCC---hhHHHHHHHHHHHHHHHHHHhhC---CCeEEEEecC
Q 028437 98 DVVIIPAGVPRK----P--GMT---RDDLFNINAGIVKDLCSAIAKYC---PNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~----~--g~~---r~~~~~~N~~~~~~i~~~i~~~~---p~~~viv~sn 146 (209)
|+||+++|.... + ..+ ..+.+..|+....++.+.+.++. +.+.++++|.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSS 145 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEec
Confidence 999999997421 1 112 22356678877777777766542 2456777764
No 159
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.30 E-value=7.3e-06 Score=67.76 Aligned_cols=115 Identities=18% Similarity=0.199 Sum_probs=71.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~~ 95 (209)
++|+|+||+|++|..++..|+++|+ +|++.++++.+ .....+..... ++..+ ...++++++ +.
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQGL--SAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCc--eEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999998 99999997521 11222322111 11111 111122222 34
Q ss_pred CCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhhC---CCeEEEEecCC
Q 028437 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC---PNAIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~~---p~~~viv~snP 147 (209)
..|++|+++|..... ..+ ..+.+..|+.....+.+.+.++. ..++++++|..
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 147 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV 147 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence 579999999875311 111 23456688877777777776542 34677777654
No 160
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.29 E-value=5.6e-06 Score=66.87 Aligned_cols=112 Identities=19% Similarity=0.176 Sum_probs=63.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC--CCCcceeEeecCCchhhhcC---CCCEEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI--NTRSEVAGYMGNDQLGQALE---DSDVVII 102 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~--~~~~~v~~~~~~~d~~~a~~---~aD~Vi~ 102 (209)
+++++|+||+|++|+.++..|+++ + +|++++++.... .++.+. ......-++...++++++++ +.|.||+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H--TLLLGGRPAERL--DELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHHH--HHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 458999999999999999999988 7 899999864221 111110 11000000111123444454 5899999
Q ss_pred cCCCCCCCC---CC---hhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 103 PAGVPRKPG---MT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~~~g---~~---r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
++|...... .+ ....+..|+.. .+.+.+.+++. ...++++|.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss 129 (227)
T PRK08219 78 NAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINS 129 (227)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcc
Confidence 998753211 11 22335566665 44444544433 345666653
No 161
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.29 E-value=4.6e-05 Score=63.98 Aligned_cols=115 Identities=18% Similarity=0.194 Sum_probs=69.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch---------hHHHhhcCCCCCcceeE----eecCCchhhhc-
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---------GVAADVGHINTRSEVAG----YMGNDQLGQAL- 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~---------~~~~dl~~~~~~~~v~~----~~~~~d~~~a~- 94 (209)
++++|+||+|++|.+++..|+++|. +|++++++... ....++..... ++.. +...+++++.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG--QALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHH
Confidence 5899999999999999999999998 99999986421 11122222111 1111 11112222333
Q ss_pred ------CCCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 95 ------EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 95 ------~~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
...|++|+++|..... ..+. ...+..|+.....+.+.+..+ ...+.++++|.+
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 150 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP 150 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 3679999999864311 1222 334567777777777666543 234567777644
No 162
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=98.29 E-value=1e-05 Score=69.54 Aligned_cols=98 Identities=19% Similarity=0.361 Sum_probs=63.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC----C------CCcceeEeecCCchhhhcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI----N------TRSEVAGYMGNDQLGQALEDS 97 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~----~------~~~~v~~~~~~~d~~~a~~~a 97 (209)
||||+|+|+ |.+|..++..|++.|+ +|.++|+++.... .+... . .+..... +.+.+++++++
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 72 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAA--EINADRENPRYLPGIKLPDNLRA---TTDLAEALADA 72 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHH--HHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCC
Confidence 469999999 9999999999999999 9999999742211 11111 0 0011221 34666788999
Q ss_pred CEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCC
Q 028437 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVN 149 (209)
Q Consensus 98 D~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~ 149 (209)
|+||++... ..+.++++.+.+.. ++..++..+|..+
T Consensus 73 D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~ 109 (325)
T PRK00094 73 DLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE 109 (325)
T ss_pred CEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence 999999531 12344445555543 5666777776544
No 163
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.29 E-value=1.6e-05 Score=66.21 Aligned_cols=103 Identities=15% Similarity=0.208 Sum_probs=64.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhhcCCCCEEEEcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
.++++|+||+|.+|.+++..|++.|. +|+++++++........ +.. ...+. ++...++.++.+.+.|++|++||.
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~~~-~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSESND-ESP-NEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhhhc-cCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 35899999999999999999999998 99999986521111111 111 00111 111122345567789999999987
Q ss_pred CCCCCCC---hhHHHHHHHHHHHHHHHHHHh
Q 028437 107 PRKPGMT---RDDLFNINAGIVKDLCSAIAK 134 (209)
Q Consensus 107 ~~~~g~~---r~~~~~~N~~~~~~i~~~i~~ 134 (209)
......+ ..+.+..|+.....+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 90 NPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4322222 334567788766666665443
No 164
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.29 E-value=9.1e-06 Score=66.53 Aligned_cols=115 Identities=21% Similarity=0.246 Sum_probs=68.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
.++|+|+||+|++|.+++..|+++|+ +|++++++.. .....++..... .+..+. ...++++.+
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAGG--KARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999998 9999999742 111222322111 111111 111233333
Q ss_pred CCCCEEEEcCCCCCC-C--CCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~-~--g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..+|+||+++|.... + ..+. .+.+..|+.....+.+.+.++ ....+++++|.
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss 142 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSS 142 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEec
Confidence 368999999876532 1 1222 334667777766666665422 22346666653
No 165
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.29 E-value=2.3e-05 Score=64.68 Aligned_cols=114 Identities=17% Similarity=0.111 Sum_probs=68.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhc-------CCCCEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL-------EDSDVV 100 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~-------~~aD~V 100 (209)
.++++|+||+|.+|.+++..|++.|. +|+++++++.. ...........-++...+++++++ ...|+|
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35899999999999999999999998 99999996422 011100000000010111233333 356999
Q ss_pred EEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh----CCCeEEEEecCC
Q 028437 101 IIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISNP 147 (209)
Q Consensus 101 i~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~----~p~~~viv~snP 147 (209)
|+++|...... .+ ....+..|+.....+.+.+.++ ...+.+|++|..
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~ 136 (252)
T PRK07856 80 VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSV 136 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Confidence 99998643111 11 2345677887777777666542 233577777653
No 166
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.28 E-value=5.6e-06 Score=67.91 Aligned_cols=114 Identities=18% Similarity=0.247 Sum_probs=66.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
.++|+|+||+|++|..++..|+++|+ +|+++++++.. ....++.+ . ..+..+. ...++.+++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNEEAAERVAAEILA-G--GRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-C--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999999 99999997521 11223322 1 0111111 111232232
Q ss_pred CCCCEEEEcCCCCCCCC----CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG----MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g----~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
...|.||+++|...... .+ ..+.+..|+.....+.+.+.++ .....++++|.
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 141 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAS 141 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 35799999998642111 11 2345666766555555444432 23355666654
No 167
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.27 E-value=5e-06 Score=68.44 Aligned_cols=114 Identities=15% Similarity=0.251 Sum_probs=66.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhh-------c
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQA-------L 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~ 94 (209)
.++|+|+||+|++|.+++..|++.|+ +|+++++++.. ....++.... .++..+ ...++++++ +
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999 99999997521 1222332111 011111 111122222 3
Q ss_pred CCCCEEEEcCCCCCCCC---CC---hhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG---MT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
.+.|+||+++|...... .+ ..+.+..|+.. ++.+.+.+++.. ..+++++|.
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss 140 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMAS 140 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 46899999998643211 11 22344556665 555556665443 446666654
No 168
>PRK05717 oxidoreductase; Validated
Probab=98.27 E-value=1.1e-05 Score=66.81 Aligned_cols=113 Identities=21% Similarity=0.283 Sum_probs=69.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH--HHhhcCCC--CCcceeEeecCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV--AADVGHIN--TRSEVAGYMGNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~--~~dl~~~~--~~~~v~~~~~~~d~~~a-------~~~a 97 (209)
++++|+||+|++|++++..|++.|. +|+++|+++.... ..++.... ...++. ...+++++ +...
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKVAKALGENAWFIAMDVA---DEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHcCCceEEEEccCC---CHHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999998 9999998642211 11121110 001111 11112111 2357
Q ss_pred CEEEEcCCCCCCCC-----CC---hhHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecC
Q 028437 98 DVVIIPAGVPRKPG-----MT---RDDLFNINAGIVKDLCSAIAKYC--PNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~~g-----~~---r~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~sn 146 (209)
|++|+++|...... .+ ..+.+..|+.....+.+.+.++- ..+.+|++|.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS 144 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLAS 144 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcc
Confidence 99999998753211 12 23567788888888888886532 3456777654
No 169
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=98.27 E-value=9.9e-06 Score=65.70 Aligned_cols=93 Identities=23% Similarity=0.329 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh---HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG---VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~---~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
||+|+|+|+ |.+|+.++..+...|+ ||.+-.++..+. ....+... +.. .+.++|.+++|+||.+.
T Consensus 1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l~~~-----i~~----~~~~dA~~~aDVVvLAV 68 (211)
T COG2085 1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAALGPL-----ITG----GSNEDAAALADVVVLAV 68 (211)
T ss_pred CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhhccc-----ccc----CChHHHHhcCCEEEEec
Confidence 578999998 9999999999999999 999987754222 12222221 222 24578999999999985
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV 148 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~ 148 (209)
.. +.+..++++++..-.+.++|=.+||.
T Consensus 69 P~----------------~a~~~v~~~l~~~~~~KIvID~tnp~ 96 (211)
T COG2085 69 PF----------------EAIPDVLAELRDALGGKIVIDATNPI 96 (211)
T ss_pred cH----------------HHHHhHHHHHHHHhCCeEEEecCCCc
Confidence 21 22344445555433466778889983
No 170
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=98.27 E-value=9.7e-06 Score=72.67 Aligned_cols=109 Identities=19% Similarity=0.218 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCC---cce----------eEeecCCchhhhc
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTR---SEV----------AGYMGNDQLGQAL 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~---~~v----------~~~~~~~d~~~a~ 94 (209)
+|||+|+|. |++|..++..|++.|+ +|+.+|+++.... .+.....+ ..+ .....+++ .
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~--~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~----~ 73 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVD--TINRGEIHIVEPDLDMVVKTAVEGGYLRATTT----P 73 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHH--HHHCCCCCcCCCCHHHHHHHHhhcCceeeecc----c
Confidence 479999999 9999999999999999 9999999753211 22211100 000 00111112 3
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCCCCc
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMI-SNPVNST 151 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~-snP~~~~ 151 (209)
++||+||++...|..... ..++..+.+.++.+.++. +...+|.- |.|.+++
T Consensus 74 ~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt 126 (415)
T PRK11064 74 EPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGAT 126 (415)
T ss_pred ccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHH
Confidence 589999999887753321 122344455556666554 34444444 4466643
No 171
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=98.25 E-value=1.4e-05 Score=70.98 Aligned_cols=111 Identities=21% Similarity=0.297 Sum_probs=64.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC------------CcceeEeecCCchhhhcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT------------RSEVAGYMGNDQLGQALED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~------------~~~v~~~~~~~d~~~a~~~ 96 (209)
|||+|+|+ |++|..++..++. |+ +|+.+|+++.+ ...+..... ....+ +..+.+.+++.++
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~-l~~t~~~~~~~~~ 73 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIH-FNATLDKNEAYRD 73 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCc-EEEecchhhhhcC
Confidence 58999999 9999999977764 88 99999998521 122222100 00111 2223455677899
Q ss_pred CCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEe-cCCCCCc
Q 028437 97 SDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI-SNPVNST 151 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~-snP~~~~ 151 (209)
||+||++.+.+...... .-++..+.+.++.+.+..++..+++- |-|++++
T Consensus 74 ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt 124 (388)
T PRK15057 74 ADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFT 124 (388)
T ss_pred CCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhcCCCCEEEEeeecCCchH
Confidence 99999997765311111 12334445555555543444444333 5666643
No 172
>PRK07069 short chain dehydrogenase; Validated
Probab=98.25 E-value=3e-05 Score=63.60 Aligned_cols=115 Identities=22% Similarity=0.233 Sum_probs=68.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC-Cc--hhHHHhhcCCCCCcc---ee-EeecCCchh-------hhcC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA-NT--PGVAADVGHINTRSE---VA-GYMGNDQLG-------QALE 95 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~-~~--~~~~~dl~~~~~~~~---v~-~~~~~~d~~-------~a~~ 95 (209)
||+|+||+|++|.+++..|+++|. +|++.+++ .. .....++........ +. ++...++++ +.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999998 99999986 32 111222222110000 11 111111222 2245
Q ss_pred CCCEEEEcCCCCCCCC---CCh---hHHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCC
Q 028437 96 DSDVVIIPAGVPRKPG---MTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~----~~~~i~~~i~~~~p~~~viv~snP 147 (209)
..|+||+++|...... .+. ...+..|+. .++.+.+.+++.. ...++++|..
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~ 139 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSV 139 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecCh
Confidence 6899999998653211 122 234566766 7778888887643 3566666643
No 173
>PRK08643 acetoin reductase; Validated
Probab=98.24 E-value=0.00014 Score=60.05 Aligned_cols=115 Identities=25% Similarity=0.274 Sum_probs=66.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a-------~~ 95 (209)
++++|+||+|++|.+++..|++.|. +|++++++... ....++..... .+.. +...++++++ +.
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDGG--KAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3789999999999999999999998 99999987421 11222322110 1111 1111112222 34
Q ss_pred CCCEEEEcCCCCCC-CC--CC---hhHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecCC
Q 028437 96 DSDVVIIPAGVPRK-PG--MT---RDDLFNINAGIVKDLCSA----IAKYCPNAIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~-~g--~~---r~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~snP 147 (209)
+.|.+|+++|.... +- .+ ....+..|+.....+++. +.+..+.++++++|..
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 140 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQ 140 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcc
Confidence 68999999986432 11 11 123456677655444444 4333345677777653
No 174
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.24 E-value=1.5e-05 Score=68.99 Aligned_cols=71 Identities=23% Similarity=0.290 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC--------C--CCcceeEeecCCchhhhcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI--------N--TRSEVAGYMGNDQLGQALE 95 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~--------~--~~~~v~~~~~~~d~~~a~~ 95 (209)
..+|||+|+|+ |.+|..++..|+..|+ +|.++++++.... ++... . .+..+.. +++++++++
T Consensus 2 ~~~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~--~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~ 73 (328)
T PRK14618 2 HHGMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAA--ALAAERENREYLPGVALPAELYP---TADPEEALA 73 (328)
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHhCcccccCCCCcCCCCeEE---eCCHHHHHc
Confidence 34679999999 9999999999999999 9999999743211 12111 1 0111222 346677889
Q ss_pred CCCEEEEcC
Q 028437 96 DSDVVIIPA 104 (209)
Q Consensus 96 ~aD~Vi~~a 104 (209)
++|+||++.
T Consensus 74 ~aD~Vi~~v 82 (328)
T PRK14618 74 GADFAVVAV 82 (328)
T ss_pred CCCEEEEEC
Confidence 999999985
No 175
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.23 E-value=5.1e-05 Score=62.00 Aligned_cols=116 Identities=19% Similarity=0.295 Sum_probs=69.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhH----HHhhcCCCCCcceeEee----cCCchhhhc---
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGV----AADVGHINTRSEVAGYM----GNDQLGQAL--- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~----~~dl~~~~~~~~v~~~~----~~~d~~~a~--- 94 (209)
.++|+|+||+|++|+.++..|+++|+ +|+++++... ... ..++.... ..+..+. ...++++.+
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAAG--GKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHH
Confidence 36899999999999999999999999 9999876421 111 11222111 1111111 111222222
Q ss_pred ----CCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHh----hCCCeEEEEecCC
Q 028437 95 ----EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAK----YCPNAIVNMISNP 147 (209)
Q Consensus 95 ----~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~----~~p~~~viv~snP 147 (209)
.+.|.||+++|..... ..+ ....+..|......+++.+.+ ......++++|..
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~ 148 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASV 148 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCc
Confidence 4689999999875421 112 233567788888888888761 2233466666654
No 176
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.23 E-value=1.9e-05 Score=64.62 Aligned_cols=114 Identities=17% Similarity=0.169 Sum_probs=69.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEee----cCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM----GNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~ 95 (209)
++|+|+||+|.+|++++..|++.|+ +|+++++++. .....++..... .+..+. ..++++++ +.
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAGG--RAHAIAADLADPASVQRFFDAAAAALG 83 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999 9999988642 112223322111 111111 11122222 25
Q ss_pred CCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+.|+||+++|...... .+ ..+.+..|+.....+.+.+.++ .+.++++++|.
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 7899999998753211 12 2234567777777777666543 23457777765
No 177
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.23 E-value=1.1e-05 Score=66.47 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=31.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
++|+|+||+|.+|+.++..|+++|. +|+++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence 4799999999999999999999998 999999865
No 178
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.23 E-value=2e-05 Score=64.67 Aligned_cols=115 Identities=21% Similarity=0.276 Sum_probs=68.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
.++|+|+||+|++|+.++..|++.|+ +|++++++.... ...++..... ++..+. ..+++++++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKGG--NAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999998 999999874211 1122222111 111111 111222322
Q ss_pred CCCCEEEEcCCCCCCCC---CCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG---MTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
...|++|+++|...... .+. ...+..|+.....+.+.+.+. .+...++++|.
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss 139 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS 139 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence 36899999998642111 122 234677887777766665432 23456776764
No 179
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.22 E-value=3.8e-05 Score=63.29 Aligned_cols=113 Identities=16% Similarity=0.134 Sum_probs=66.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhcC-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQALE------- 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~~------- 95 (209)
++|+|+||+|.+|..++..|++.|. +|+++++++.. ....++..... .+..+. ..++++++++
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAGG--EALFVACDVTRDAEVKALVEQTIAAYG 83 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999998 99999997421 12222322211 111111 1112333333
Q ss_pred CCCEEEEcCCCCCCC----CCCh---hHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKP----GMTR---DDLFNINAGIVKDLCSA----IAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~----g~~r---~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~sn 146 (209)
..|++|+++|..... ..+. .+.+..|+.....+.+. +.+. ....++++|.
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS 144 (253)
T PRK06172 84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTAS 144 (253)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence 459999999874321 1122 33456777666554443 3322 3356666664
No 180
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=98.21 E-value=7.3e-06 Score=58.02 Aligned_cols=94 Identities=21% Similarity=0.291 Sum_probs=58.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCC-ccEEEEE-ecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPL-VSRLALY-DIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~-D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
||+|+|+ |.+|.+++..|+..|. ..+|.++ ++++. ...++.... . .... ..+..++++++|+||++.-.
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~--~~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav~p- 71 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPE--KAAELAKEY-G--VQAT--ADDNEEAAQEADVVILAVKP- 71 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHH--HHHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S-G-
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHH--HHHHHHHhh-c--cccc--cCChHHhhccCCEEEEEECH-
Confidence 7999999 9999999999999981 2299966 77653 222222211 0 1111 12457889999999999621
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 028437 108 RKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 108 ~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP 147 (209)
..+.++++.+....++..+|-++||
T Consensus 72 ---------------~~~~~v~~~i~~~~~~~~vis~~ag 96 (96)
T PF03807_consen 72 ---------------QQLPEVLSEIPHLLKGKLVISIAAG 96 (96)
T ss_dssp ---------------GGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred ---------------HHHHHHHHHHhhccCCCEEEEeCCC
Confidence 1124555666444467777766664
No 181
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.21 E-value=8.8e-06 Score=68.59 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=61.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhc------CC-CCEEEE
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL------ED-SDVVII 102 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~------~~-aD~Vi~ 102 (209)
||+|+||||++|++++..|++.|+ +|.++.|++..... .......-++...+++.+++ ++ +|.|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~~~~~~-----~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSSSSSAG-----PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCCccccC-----CCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 589999999999999999999998 99999997532110 01000000122233466677 67 999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
+++... . .....+++++++++.+-. ++++.|
T Consensus 74 ~~~~~~--~---------~~~~~~~~i~aa~~~gv~-~~V~~S 104 (285)
T TIGR03649 74 VAPPIP--D---------LAPPMIKFIDFARSKGVR-RFVLLS 104 (285)
T ss_pred eCCCCC--C---------hhHHHHHHHHHHHHcCCC-EEEEee
Confidence 865321 1 123445677777765433 566665
No 182
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.21 E-value=3.8e-05 Score=62.70 Aligned_cols=115 Identities=22% Similarity=0.301 Sum_probs=67.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeE--eecCCchhh-------hcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAG--YMGNDQLGQ-------ALED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~--~~~~~d~~~-------a~~~ 96 (209)
.++++|+||+|++|+.++..|+++|. .|.+.+++.... ...++.. . ..... +...+++++ .+..
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~-~--~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELGE-R--VKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCC-c--eEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999998 888888764211 1112211 0 01100 100112222 2456
Q ss_pred CCEEEEcCCCCCCC---C---CChhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 97 SDVVIIPAGVPRKP---G---MTRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 97 aD~Vi~~ag~~~~~---g---~~r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
.|.||+++|..... . .+..+.+..|+.....+++.+.+. .+...++++|..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 140 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV 140 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence 89999999874321 1 123345677777766666655432 244567777654
No 183
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.21 E-value=3.8e-05 Score=63.06 Aligned_cols=117 Identities=12% Similarity=0.052 Sum_probs=65.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeE----eecCCchhhhcC-------
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAG----YMGNDQLGQALE------- 95 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~------- 95 (209)
+.++|+|+||+|++|++++..|++.|. +|++.+++... ...++.... ..++.. +...++++++++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQSED-AAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFG 79 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCCCHH-HHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 345899999999999999999999998 88876553211 111111100 001111 111112333332
Q ss_pred C-CCEEEEcCCCCCC---------CCCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 96 D-SDVVIIPAGVPRK---------PGMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 96 ~-aD~Vi~~ag~~~~---------~g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
. .|++|+.+|.... ...+. .+.+..|+.....+.+.+.++ ...+.+++++..
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 147 (253)
T PRK08642 80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTN 147 (253)
T ss_pred CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 2 8999999975310 11122 234667777666666665432 234677777653
No 184
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.20 E-value=2.6e-05 Score=64.56 Aligned_cols=114 Identities=17% Similarity=0.191 Sum_probs=70.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~ 95 (209)
++|+|+||+|++|++++..|++.|+ +|++++++..+ ....++..... ++..+. ..++++++ +.
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~~--~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALGI--DALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999998 99999986421 11122222111 111111 11122221 24
Q ss_pred CCCEEEEcCCCCCCCC---C---ChhHHHHHHHHHHHHHHHHHHhh----CCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPG---M---TRDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~---~r~~~~~~N~~~~~~i~~~i~~~----~p~~~viv~sn 146 (209)
..|.||+++|...... . ...+.+..|+.....+.+.+.++ .+...++++|.
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS 149 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS 149 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 6799999998642111 1 12345678888888888877654 24456777764
No 185
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.20 E-value=3.3e-05 Score=64.13 Aligned_cols=117 Identities=17% Similarity=0.138 Sum_probs=65.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCccee-EeecCCchhhh-------cCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVA-GYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~-~~~~~~d~~~a-------~~~aD 98 (209)
|+++|+||+|.+|..++..|+++|. +|++.++++.. ....++.+......+. ++...++.+++ +...|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999999999998 99999997521 1222332211000000 01111122222 34689
Q ss_pred EEEEcCCCCCC-C----CCChhHH---HHHHHH----HHHHHHHHHHhhCCCeEEEEecCC
Q 028437 99 VVIIPAGVPRK-P----GMTRDDL---FNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 99 ~Vi~~ag~~~~-~----g~~r~~~---~~~N~~----~~~~i~~~i~~~~p~~~viv~snP 147 (209)
++|+++|.... + ..+..++ +..|+. ..+.++..+.+....+.++++|..
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~ 139 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSV 139 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCc
Confidence 99999986421 1 1122222 233432 234455555433345677777643
No 186
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.19 E-value=1.2e-05 Score=70.78 Aligned_cols=78 Identities=18% Similarity=0.325 Sum_probs=54.7
Q ss_pred ccCCCCCCCeEEEEcCCCchHHHHHHHHHhCC-------CccEEEEEecCCc---hhHHHhhcCC--C--------CCcc
Q 028437 21 YSSESVPDRKVAVLGAAGGIGQPLALLMKLNP-------LVSRLALYDIANT---PGVAADVGHI--N--------TRSE 80 (209)
Q Consensus 21 ~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g-------~~~ev~l~D~~~~---~~~~~dl~~~--~--------~~~~ 80 (209)
|-+.-..++||+|+|+ |..|.+++..|..++ + +|.+|.+++. .....++++. . .+..
T Consensus 4 ~~~~~~~~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~--~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~n 80 (365)
T PTZ00345 4 FQKLRCGPLKVSVIGS-GNWGSAISKVVGENTQRNYIFHN--EVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDN 80 (365)
T ss_pred hhhcccCCCeEEEECC-CHHHHHHHHHHHhcCCcccCCCC--eEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCc
Confidence 3334456689999999 999999999999887 5 9999998752 1123333321 1 1223
Q ss_pred eeEeecCCchhhhcCCCCEEEEcC
Q 028437 81 VAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 81 v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+.. ++|+++++++||+||++.
T Consensus 81 i~~---tsdl~eav~~aDiIvlAV 101 (365)
T PTZ00345 81 IVA---VSDLKEAVEDADLLIFVI 101 (365)
T ss_pred eEE---ecCHHHHHhcCCEEEEEc
Confidence 332 457888999999999985
No 187
>PLN00016 RNA-binding protein; Provisional
Probab=98.19 E-value=1.1e-05 Score=71.05 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=62.3
Q ss_pred CCCeEEEE----cCCCchHHHHHHHHHhCCCccEEEEEecCCchhHH---------HhhcCCCCCcceeEee-cCCchhh
Q 028437 27 PDRKVAVL----GAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVA---------ADVGHINTRSEVAGYM-GNDQLGQ 92 (209)
Q Consensus 27 ~~~kI~Ii----GasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~---------~dl~~~~~~~~v~~~~-~~~d~~~ 92 (209)
.++||+|+ ||+|++|++++..|++.|+ +|++++++...... .++.... ++.+. +..|+++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~----v~~v~~D~~d~~~ 124 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGKEPSQKMKKEPFSRFSELSSAG----VKTVWGDPADVKS 124 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCCcchhhhccCchhhhhHhhhcC----ceEEEecHHHHHh
Confidence 34689999 9999999999999999999 99999997532110 0111111 11111 1123344
Q ss_pred hc--CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 93 AL--EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 93 a~--~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
.+ .++|+||++++.. ...++.+++++++.+.. ++|++|
T Consensus 125 ~~~~~~~d~Vi~~~~~~--------------~~~~~~ll~aa~~~gvk-r~V~~S 164 (378)
T PLN00016 125 KVAGAGFDVVYDNNGKD--------------LDEVEPVADWAKSPGLK-QFLFCS 164 (378)
T ss_pred hhccCCccEEEeCCCCC--------------HHHHHHHHHHHHHcCCC-EEEEEc
Confidence 44 5799999986421 23457788888765433 566665
No 188
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.19 E-value=1.3e-05 Score=67.01 Aligned_cols=114 Identities=18% Similarity=0.124 Sum_probs=65.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhh-------cCCCCEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQA-------LEDSDVV 100 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a-------~~~aD~V 100 (209)
++++|+||+|++|..++..|++.|+ +|++.+++... ..++...... .+. ++...+++++. +.+.|+|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~--~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKAED--VEALAAAGFT-AVQLDVNDGAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHCCCe-EEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5799999999999999999999998 99999986421 1122211111 011 11111122222 2468999
Q ss_pred EEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecCC
Q 028437 101 IIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC--PNAIVNMISNP 147 (209)
Q Consensus 101 i~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~snP 147 (209)
|+++|..... ..+ ....+..|+.....+.+.+.... ..+.++++|..
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~ 131 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSV 131 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCc
Confidence 9999864311 112 22345667766655555543321 23456666543
No 189
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.19 E-value=3.3e-05 Score=63.46 Aligned_cols=113 Identities=19% Similarity=0.216 Sum_probs=66.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEe----ecCC-------chhhhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGY----MGND-------QLGQALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~----~~~~-------d~~~a~~ 95 (209)
++|+|+||+|++|+.++..|+++|+ +|++++++.... ...++..... ++... ...+ ..++.+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDAGG--SVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999999 999999974211 1112221111 11111 1111 2233456
Q ss_pred CCCEEEEcCCCCCC-C--CCC---hhHHHHHHHHHHHHHHHHH----HhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAI----AKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~-~--g~~---r~~~~~~N~~~~~~i~~~i----~~~~p~~~viv~sn 146 (209)
+.|+||+++|.... + ..+ ..+.+..|......+.+.+ ++.. ..+++++|.
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss 137 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIAS 137 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 78999999986431 1 111 2334556776655565555 4333 346666654
No 190
>PRK09135 pteridine reductase; Provisional
Probab=98.19 E-value=4.8e-06 Score=68.12 Aligned_cols=104 Identities=22% Similarity=0.231 Sum_probs=64.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
++|+|+||+|++|++++..|+++|+ +|+++++... .....++.+... ..+..+. ..+++.+++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999999 9999998531 111122222110 0111111 111222333
Q ss_pred CCCCEEEEcCCCCCC-C--C---CChhHHHHHHHHHHHHHHHHHHhh
Q 028437 95 EDSDVVIIPAGVPRK-P--G---MTRDDLFNINAGIVKDLCSAIAKY 135 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~-~--g---~~r~~~~~~N~~~~~~i~~~i~~~ 135 (209)
...|+||+++|.... + . .+..+++..|+.....+.+.+.++
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 357999999986321 1 1 123456778998888888887654
No 191
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.19 E-value=2.5e-05 Score=63.62 Aligned_cols=116 Identities=20% Similarity=0.298 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch---hHHHhhcCCCCCcceeEe----ecCCchhhh------
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHINTRSEVAGY----MGNDQLGQA------ 93 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~---~~~~dl~~~~~~~~v~~~----~~~~d~~~a------ 93 (209)
..++|+|+|++|++|++++..|++.|+ +|++..++... ....++..... .+..+ ...+++.++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALGG--KALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999998 88777765321 11222221111 11111 111122222
Q ss_pred -cCCCCEEEEcCCCCCCCC---CCh---hHHHHHHHHHHHHHHHHHHhhC---CCeEEEEecC
Q 028437 94 -LEDSDVVIIPAGVPRKPG---MTR---DDLFNINAGIVKDLCSAIAKYC---PNAIVNMISN 146 (209)
Q Consensus 94 -~~~aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~~~~~i~~~i~~~~---p~~~viv~sn 146 (209)
+.+.|.||+++|...... .+. ...+..|+.....+.+.+.++. +..+++++|.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 246899999998643211 121 2345678877777777776543 2356766664
No 192
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.19 E-value=6.9e-05 Score=62.59 Aligned_cols=114 Identities=21% Similarity=0.197 Sum_probs=66.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCC-CcceeEeecCCc-------hhhhcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINT-RSEVAGYMGNDQ-------LGQALEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~-~~~v~~~~~~~d-------~~~a~~~aD 98 (209)
++|+|+||+|.+|..++..|++.|. +|++.++++... ...++..... .+++. ..++ ..+.+.+.|
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~~id 80 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVVGGPLDVT---DPASFAAFLDAVEADLGPID 80 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccceEEEccCC---CHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999998 899999874221 1122221110 01111 1111 122245789
Q ss_pred EEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHH----HHHHhhCCCeEEEEecCCC
Q 028437 99 VVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLC----SAIAKYCPNAIVNMISNPV 148 (209)
Q Consensus 99 ~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~----~~i~~~~p~~~viv~snP~ 148 (209)
++|+++|...... .+ ....+..|+.....+. +.+.+. +.+.++++|...
T Consensus 81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~ 139 (273)
T PRK07825 81 VLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASLA 139 (273)
T ss_pred EEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCcc
Confidence 9999998753211 11 2334566776555444 444432 345777777543
No 193
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.19 E-value=8.3e-05 Score=61.25 Aligned_cols=102 Identities=25% Similarity=0.230 Sum_probs=61.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh---HHHhhcCCCCCcceeEe----ecCCchhh-------hc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG---VAADVGHINTRSEVAGY----MGNDQLGQ-------AL 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~---~~~dl~~~~~~~~v~~~----~~~~d~~~-------a~ 94 (209)
++|+|+||+|++|+.++..|+++|. +|+++++..... ...++..... ++..+ ....++.+ .+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPDDEELAATQQELRALGV--EVIFFPADVADLSAHEAMLDAAQAAW 78 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4799999999999999999999998 999999753211 1122222111 11111 11111212 22
Q ss_pred CCCCEEEEcCCCCCC---C--CCC---hhHHHHHHHHHHHHHHHHHHh
Q 028437 95 EDSDVVIIPAGVPRK---P--GMT---RDDLFNINAGIVKDLCSAIAK 134 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~---~--g~~---r~~~~~~N~~~~~~i~~~i~~ 134 (209)
...|+||+++|.... + ..+ ..+.+..|+.....+.+.+.+
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (256)
T PRK12745 79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK 126 (256)
T ss_pred CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence 468999999987421 1 112 234567787777777666544
No 194
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.18 E-value=3.2e-05 Score=63.45 Aligned_cols=115 Identities=19% Similarity=0.228 Sum_probs=68.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEe----ecCCchh-------hhcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGY----MGNDQLG-------QALED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~----~~~~d~~-------~a~~~ 96 (209)
.++|+|+||+|.+|.+++..|++.|+ +|+++++++.......+..... .+..+ ...++++ +....
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALGR--RFLSLTADLSDIEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcCC--ceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999999 9999998642222222222110 11111 0111222 22346
Q ss_pred CCEEEEcCCCCCCCC---C---ChhHHHHHHHHHHHHHHHHHHhh----CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKPG---M---TRDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g---~---~r~~~~~~N~~~~~~i~~~i~~~----~p~~~viv~sn 146 (209)
.|++|+++|...... . ...+.+..|+.....+.+.+.+. ...+.++++|.
T Consensus 81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS 140 (248)
T TIGR01832 81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS 140 (248)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 899999998743111 1 22345667777666666665432 22467777654
No 195
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.18 E-value=4.8e-05 Score=66.43 Aligned_cols=111 Identities=16% Similarity=0.197 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC----C-------CCcceeEeecCCchhhhc
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI----N-------TRSEVAGYMGNDQLGQAL 94 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~----~-------~~~~v~~~~~~~d~~~a~ 94 (209)
+.+|||+|+|+ |.+|..++..|.+.| +++++.+++. ...++... . .+..+. .++|+.+++
T Consensus 5 ~~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~--~~~~i~~~~~~~~~l~~~~~l~~~i~---~t~d~~~a~ 75 (341)
T PRK12439 5 KREPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAE--TADDINDNHRNSRYLGNDVVLSDTLR---ATTDFAEAA 75 (341)
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHH--HHHHHHhcCCCcccCCCCcccCCCeE---EECCHHHHH
Confidence 34589999999 999999999999887 4677777642 12222211 0 011222 245777889
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCc-HHHHHHHHHH
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNST-VPIAAEVFKK 161 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~-~~i~~~~~~~ 161 (209)
+++|+||++.. ...++++++.+..+- ++..++.++|-.+.. ...+++.+.+
T Consensus 76 ~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~ 128 (341)
T PRK12439 76 NCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEE 128 (341)
T ss_pred hcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHH
Confidence 99999999852 123455666666543 555677777765531 1233455544
No 196
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.18 E-value=1.4e-05 Score=65.88 Aligned_cols=116 Identities=22% Similarity=0.269 Sum_probs=69.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcCCCCCccee-EeecCCchhhh-------cCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHINTRSEVA-GYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~~~~~~~v~-~~~~~~d~~~a-------~~~aD 98 (209)
.++|+|+||+|.+|.+++..|+++|. +|++.++++... ...++...... .+. ++...+++++. +...|
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLGGNAK-GLVCDVSDSQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 35899999999999999999999998 999999874211 11222211100 000 01111122222 34679
Q ss_pred EEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 99 VVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+||+++|...... .+ ....+..|+.....+.+.+.++ ...++++++|.
T Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 9999998753211 11 2235677887777777776553 23456777654
No 197
>PRK06398 aldose dehydrogenase; Validated
Probab=98.17 E-value=2.5e-05 Score=65.01 Aligned_cols=109 Identities=17% Similarity=0.262 Sum_probs=65.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhh-------hcCCCCEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQ-------ALEDSDVVI 101 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~-------a~~~aD~Vi 101 (209)
++++|+||+|.+|.+++..|++.|+ +|++.+++............+ +. ..+++++ .+...|++|
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~D----~~---~~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYNDVDYFKVD----VS---NKEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccCceEEEEcc----CC---CHHHHHHHHHHHHHHcCCCCEEE
Confidence 5899999999999999999999999 999999864211100000111 10 0112222 234689999
Q ss_pred EcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 102 IPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 102 ~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+++|..... ..+. ...+..|+.....+.+.+.++ ...+.+|++|.
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 131 (258)
T PRK06398 78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIAS 131 (258)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCc
Confidence 999875321 1222 234677777665555554432 34567777754
No 198
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.17 E-value=1.5e-05 Score=66.59 Aligned_cols=117 Identities=17% Similarity=0.141 Sum_probs=68.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhhcC------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQALE------ 95 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a~~------ 95 (209)
.++|+|+||+|++|++++..|++.|+ +|+++++++.. ....++........+..+ ...+++++.++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999 99999986421 122222211100111111 11112223333
Q ss_pred -CCCEEEEcCCCCCCC----CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 -DSDVVIIPAGVPRKP----GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 -~aD~Vi~~ag~~~~~----g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..|++|+++|..... ..+ ..+.+..|+.....+.+.+.+. ...+.++++|.
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS 146 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISS 146 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 689999999854211 122 2334566777777776655443 23456777764
No 199
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.17 E-value=2.1e-05 Score=67.59 Aligned_cols=115 Identities=15% Similarity=0.096 Sum_probs=67.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhhcC------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQALE------ 95 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~------ 95 (209)
.++|+|+||+|+||.+++..|++.|. +|++.+++... ....++.... ..+.. +...++.+++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIPP--DSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhccC--CceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45799999999999999999999998 99999987422 1222332111 11111 111112223332
Q ss_pred -CCCEEEEcCCCCCC----CCCC---hhHHHHHHHHHHHHHHHHHH----hhCC-CeEEEEecC
Q 028437 96 -DSDVVIIPAGVPRK----PGMT---RDDLFNINAGIVKDLCSAIA----KYCP-NAIVNMISN 146 (209)
Q Consensus 96 -~aD~Vi~~ag~~~~----~g~~---r~~~~~~N~~~~~~i~~~i~----~~~p-~~~viv~sn 146 (209)
..|++|+.||.... ...+ ....+..|+.....+.+.+. +... .++|+++|.
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS 145 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGT 145 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcc
Confidence 48999999986421 1122 23456777766555555444 3322 347777763
No 200
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.17 E-value=1.8e-05 Score=65.07 Aligned_cols=114 Identities=18% Similarity=0.164 Sum_probs=69.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcc-ee-EeecCCchhhhcCC----CCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSE-VA-GYMGNDQLGQALED----SDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~-v~-~~~~~~d~~~a~~~----aD~Vi~ 102 (209)
.+++|+||+|.+|..++..|+.+|+ +|+++++++.. ..++.+...... +. ++...+++++++++ .|.+|+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSV--LDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 4799999999999999999999998 99999997421 111211110000 11 11111233444443 478888
Q ss_pred cCCCCCCC---CCCh---hHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 103 PAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
.+|..... ..+. .+.+..|+....++.+.+...- +..+++++|.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS 128 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGS 128 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEec
Confidence 88753211 1222 3457889888888888877642 3456666654
No 201
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=98.17 E-value=5.5e-05 Score=68.08 Aligned_cols=121 Identities=13% Similarity=0.153 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCC------c---ceeEeecCCchhhhcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTR------S---EVAGYMGNDQLGQALEDS 97 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~------~---~v~~~~~~~d~~~a~~~a 97 (209)
++|||+|+|- |++|..++..|+. ++ +|+.+|+++. .+..+.....+ . ....+..+++. +++++|
T Consensus 5 ~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~--~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~-~~~~~a 77 (425)
T PRK15182 5 DEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKK--RILELKNGVDVNLETTEEELREARYLKFTSEI-EKIKEC 77 (425)
T ss_pred CCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHH--HHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCH-HHHcCC
Confidence 3479999998 9999999999877 57 9999999853 23333322110 0 00011113344 568999
Q ss_pred CEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-ecCCCCCcHHHHHHHHH
Q 028437 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNM-ISNPVNSTVPIAAEVFK 160 (209)
Q Consensus 98 D~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv-~snP~~~~~~i~~~~~~ 160 (209)
|++|++.+.|.+.... .++..+....+.+.++. +...+|. .|-|.+++--++...+.
T Consensus 78 dvvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~~~~~l~ 136 (425)
T PRK15182 78 NFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEECVPILA 136 (425)
T ss_pred CEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHHHHHHHH
Confidence 9999999887533211 12233343344454443 3333333 35566543323333333
No 202
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.16 E-value=6.6e-05 Score=66.51 Aligned_cols=146 Identities=19% Similarity=0.087 Sum_probs=82.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
||||+|+|| |+||+.++..|++++- .+|++.|+...+. .+.+.......+..-+....+.+.+++++.|+||+++..
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 579999999 9999999999999984 4999999974321 222222111111111111223567889999999999753
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE---eh---hhHHH
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV---TT---LDVVR 180 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~---~~---lds~r 180 (209)
.. + ..+++++.+..-+ ++-.|+-.... +-+-..+.++ .+.++ .. +...
T Consensus 79 ~~------------~----~~i~ka~i~~gv~--yvDts~~~~~~-~~~~~~a~~A------git~v~~~G~dPGi~nv- 132 (389)
T COG1748 79 FV------------D----LTILKACIKTGVD--YVDTSYYEEPP-WKLDEEAKKA------GITAVLGCGFDPGITNV- 132 (389)
T ss_pred hh------------h----HHHHHHHHHhCCC--EEEcccCCchh-hhhhHHHHHc------CeEEEcccCcCcchHHH-
Confidence 31 1 2455666655543 33455544422 3344444443 23222 11 2222
Q ss_pred HHHHHHHHcCCCCCCeeEEEE
Q 028437 181 AKTFYAGKANVNVAGLLKLLT 201 (209)
Q Consensus 181 ~~~~la~~l~v~~~~v~~~~i 201 (209)
+-.+.++++.-..++++-++.
T Consensus 133 ~a~~a~~~~~~~i~si~iy~g 153 (389)
T COG1748 133 LAAYAAKELFDEIESIDIYVG 153 (389)
T ss_pred HHHHHHHHhhccccEEEEEEe
Confidence 344455666546667765554
No 203
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.16 E-value=6.9e-05 Score=62.40 Aligned_cols=114 Identities=22% Similarity=0.231 Sum_probs=66.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCccee-EeecCCchhhh-------cCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVA-GYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~-~~~~~~d~~~a-------~~~aD 98 (209)
++++|+||+|.+|..++..|++.|. +|++.|+++... ...++... .. .+. ++...++++++ +...|
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~Dl~~~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLGER-AR-FIATDITDDAAIERAVATVVARFGRVD 82 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCe-eE-EEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999 999999975211 11222110 00 000 01111122222 34679
Q ss_pred EEEEcCCCCCCCC--CCh---hHHHHHHHHHHHHHHHHHHhh--CCCeEEEEecC
Q 028437 99 VVIIPAGVPRKPG--MTR---DDLFNINAGIVKDLCSAIAKY--CPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~~g--~~r---~~~~~~N~~~~~~i~~~i~~~--~p~~~viv~sn 146 (209)
++|+++|...... .+. .+.+..|+.....+.+.+.+. .+.+.++++|.
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS 137 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS 137 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 9999998643221 222 234556776665555554432 34566777764
No 204
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.16 E-value=2.2e-05 Score=67.54 Aligned_cols=79 Identities=24% Similarity=0.385 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
..|||+|+|+ |.+|.+++..|...|+ +|.++++++. .+++++++++|+||++...
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp~ 57 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAVSM 57 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEECCh
Confidence 4579999999 9999999999999999 9999998631 1345677889998888421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhh--CCCeEEEEecC
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKY--CPNAIVNMISN 146 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~--~p~~~viv~sn 146 (209)
..++++++.+..+ .++.+++..++
T Consensus 58 ----------------~~~~~v~~~l~~~~~~~~~ivi~~s~ 83 (308)
T PRK14619 58 ----------------KGVRPVAEQVQALNLPPETIIVTATK 83 (308)
T ss_pred ----------------HHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 2234445555442 34566666665
No 205
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.16 E-value=3e-05 Score=64.58 Aligned_cols=115 Identities=18% Similarity=0.175 Sum_probs=70.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhh-------c
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQA-------L 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~ 94 (209)
.++++|+||+|++|.+++..|+++|. +|+++++++.. ....++.... ..+..+ ...++++++ +
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999998 99999997421 1122232211 111111 111112222 3
Q ss_pred CCCCEEEEcCCCCCCCC---C---ChhHHHHHHHHHHHHHHHHHHh----hCCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG---M---TRDDLFNINAGIVKDLCSAIAK----YCPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g---~---~r~~~~~~N~~~~~~i~~~i~~----~~p~~~viv~sn 146 (209)
...|+||++||...... . +..+.+..|+.....+.+.+.+ ..+.+.++++|.
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS 147 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS 147 (263)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 46899999998643211 1 1334567777777777766654 244567777765
No 206
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.16 E-value=1.2e-05 Score=66.38 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=68.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhh-------hcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQ-------ALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~-------a~~ 95 (209)
++|+|+||+|++|++++..|+++|. +|+++++++.. ....++..... ++..+ ...++++. .+.
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLGR--RALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhCC--ceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999998 99999987521 11222221110 11111 11112222 234
Q ss_pred CCCEEEEcCCCCCC--C--CCC---hhHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRK--P--GMT---RDDLFNINAGIVKDLCSAIAKYC--PNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~--~--g~~---r~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~sn 146 (209)
..|+||+++|.... + ..+ ....+..|+.....+.+.+.++- ....+|++|.
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 68999999986421 1 122 23446777777777777776532 1246777654
No 207
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.15 E-value=3.1e-05 Score=64.22 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=69.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc-------C
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL-------E 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~-------~ 95 (209)
++|+|+||+|++|..++..|++.|+ +|+++++++.. ....++..... .+..+. ..+++++++ .
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHGG--EALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999998 99999987421 11222322211 111111 111222222 3
Q ss_pred CCCEEEEcCCCCCCCC---C-Ch---hHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecCC
Q 028437 96 DSDVVIIPAGVPRKPG---M-TR---DDLFNINAGIVKDLCSAIAKYC--PNAIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~-~r---~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~snP 147 (209)
+.|+||+++|...... . +. .+.+..|+.....+.+.+.++. ..+.++++|..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~ 138 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL 138 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 6799999998643221 1 22 2346778888777777765432 23566666543
No 208
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.15 E-value=0.00013 Score=61.19 Aligned_cols=115 Identities=14% Similarity=0.125 Sum_probs=65.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee-cCCc---hh------hhcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM-GNDQ---LG------QALED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~-~~~d---~~------~a~~~ 96 (209)
+.++|+||+|++|++++..|+++|+ +|+++++++.. ....++.+......+..+. +-+| ++ +.+..
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999998 99999986421 1111222211111121111 1112 21 12345
Q ss_pred CCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHH----HhhCCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAI----AKYCPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i----~~~~p~~~viv~sn 146 (209)
.|+||+++|..... ..+ ..+.+..|+.....+++.+ ++.. ...++++|.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS 140 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISS 140 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECc
Confidence 79999999865311 111 2334567777766666554 4332 345666654
No 209
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.14 E-value=6.9e-05 Score=62.09 Aligned_cols=115 Identities=19% Similarity=0.280 Sum_probs=66.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeE----eecCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAG----YMGNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~----~~~~~d~~~a-------~~~a 97 (209)
++++|+||+|.+|..++..|++.|. +|++++++........+..... ++.. +...++.+++ +...
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALGR--KFHFITADLIQQKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcCC--eEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999 9999988542222222221111 1111 1111122222 3457
Q ss_pred CEEEEcCCCCCCCC---CC---hhHHHHHHHHHHH----HHHHHHHhhCCCeEEEEecCC
Q 028437 98 DVVIIPAGVPRKPG---MT---RDDLFNINAGIVK----DLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 98 D~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~----~i~~~i~~~~p~~~viv~snP 147 (209)
|++|++||...... .+ ....+..|+.... .+.+.+.+....+.+|++|..
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~ 144 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASM 144 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCCh
Confidence 99999998753211 12 2234556665444 444444443334677777653
No 210
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.13 E-value=4.1e-05 Score=65.23 Aligned_cols=115 Identities=13% Similarity=0.132 Sum_probs=65.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcce-e-EeecCCchhhhc-------CCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEV-A-GYMGNDQLGQAL-------EDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v-~-~~~~~~d~~~a~-------~~a 97 (209)
++|+|+||+|.+|..++..|++.|+ +|++++++... ....++......... . ++...++.++++ .+.
T Consensus 41 k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999998 99999997421 112222211110000 0 011111222333 378
Q ss_pred CEEEEcCCCCCCCC--C---C---hhHHHHHHHHHHHHHHH----HHHhhCCCeEEEEecC
Q 028437 98 DVVIIPAGVPRKPG--M---T---RDDLFNINAGIVKDLCS----AIAKYCPNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~~g--~---~---r~~~~~~N~~~~~~i~~----~i~~~~p~~~viv~sn 146 (209)
|++|++||...... . + ....+..|+.....+++ .+++. ..+.++++|.
T Consensus 119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS 178 (293)
T PRK05866 119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVAT 178 (293)
T ss_pred CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECC
Confidence 99999998753211 0 1 12345566655444444 44433 3456666653
No 211
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.13 E-value=1.6e-05 Score=64.95 Aligned_cols=113 Identities=10% Similarity=0.067 Sum_probs=65.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhcC----CCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQALE----DSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~~----~aD~Vi~ 102 (209)
||++|+||+|.+|++++..|++.|. +|+++++++.+. ...++.......++. ..++++++++ ..|++|+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARRDDLEVAAKELDVDAIVCDNT---DPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhccCcEEecCCC---CHHHHHHHHHHHhhcCcEEEE
Confidence 4899999999999999999999998 999999864211 111121100011111 1122333332 5799999
Q ss_pred cCCCCC---CCC--------CChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 103 PAGVPR---KPG--------MTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~---~~g--------~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
++|... .+. .+....+..|+...-.+.+.+.+.- ..+.++++|.
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS 131 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVP 131 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEec
Confidence 987421 110 1123345667766556655554432 3466777753
No 212
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.13 E-value=1.3e-05 Score=66.49 Aligned_cols=113 Identities=24% Similarity=0.192 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
+++|+|+||+|.+|..++..|++.|. +|++++++... ....++.... ++..+. ..+++++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~i~~~~~~~~~~~ 76 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA--TLGLVARRTDALQAFAARLPKAA---RVSVYAADVRDADALAAAAADFIAAH 76 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcccCC---eeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 35899999999999999999999998 99999987421 1112222111 111111 111222322
Q ss_pred CCCCEEEEcCCCCCCCC----CC---hhHHHHHHHHHHHHHHH----HHHhhCCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG----MT---RDDLFNINAGIVKDLCS----AIAKYCPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g----~~---r~~~~~~N~~~~~~i~~----~i~~~~p~~~viv~sn 146 (209)
...|++|+++|...... .+ ....+..|+.....+.+ .+++.. .+.++++|.
T Consensus 77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS 138 (257)
T PRK07024 77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIAS 138 (257)
T ss_pred CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEec
Confidence 23699999998753211 11 23345667665555444 554433 356666654
No 213
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.12 E-value=6.7e-05 Score=61.67 Aligned_cols=120 Identities=20% Similarity=0.241 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCC-cceeEeec----CC-------ch
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTR-SEVAGYMG----ND-------QL 90 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~-~~v~~~~~----~~-------d~ 90 (209)
+.+.++|+|+|++|++|.+++..|++.|. +|++++++... ....++.+.... ..+..... .+ .+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 33456899999999999999999999998 99999997521 122233322110 11110000 00 12
Q ss_pred hhhcCCCCEEEEcCCCCCC--C--CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 91 GQALEDSDVVIIPAGVPRK--P--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 91 ~~a~~~aD~Vi~~ag~~~~--~--g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
.+.+...|.||++||.... + ..+ ..+.+..|+.....+.+.+.++ .+...++++|.
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 2334568999999986421 1 112 2345667877666666655432 34556776664
No 214
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.12 E-value=7.2e-05 Score=61.63 Aligned_cols=115 Identities=18% Similarity=0.173 Sum_probs=65.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCccee--EeecCCchhhhcC-CCCEEEEc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVA--GYMGNDQLGQALE-DSDVVIIP 103 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~--~~~~~~d~~~a~~-~aD~Vi~~ 103 (209)
++|+|+||+|.+|+.++..|++.|. +|++.++++... .............+. ++....++++++. +.|+||++
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 4799999999999999999999998 999998864211 111111111111111 1111223445554 89999999
Q ss_pred CCCCCCCC---CCh---hHHHHHHHHHHH----HHHHHHHhhCCCeEEEEecC
Q 028437 104 AGVPRKPG---MTR---DDLFNINAGIVK----DLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 104 ag~~~~~g---~~r---~~~~~~N~~~~~----~i~~~i~~~~p~~~viv~sn 146 (209)
+|...... .+. ...+..|+.... .+.+.+.+... .+++++|.
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~SS 132 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK-GKVVFTSS 132 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-ceEEEEcC
Confidence 98753211 112 223445655443 34444444333 56777764
No 215
>PRK08264 short chain dehydrogenase; Validated
Probab=98.12 E-value=2.9e-05 Score=63.38 Aligned_cols=115 Identities=15% Similarity=0.069 Sum_probs=68.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhhcC---CCCEEEEc
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQALE---DSDVVIIP 103 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a~~---~aD~Vi~~ 103 (209)
.++|+|+||+|.+|+.++..|++.|. .+|++++++..+.. + ...... .+. ++...+++++.++ ..|+||++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~--~-~~~~~~-~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVT--D-LGPRVV-PLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhh--h-cCCceE-EEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 35899999999999999999999885 37888988642211 1 111100 011 1111123333333 57999999
Q ss_pred CCCCCCCC----CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 104 AGVPRKPG----MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 104 ag~~~~~g----~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
+|.....+ .+ ..+.+..|+.....+.+.+.+. .....++++|..
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 134 (238)
T PRK08264 81 AGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSV 134 (238)
T ss_pred CCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCh
Confidence 98732111 12 2334567777777777765543 234567777654
No 216
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.12 E-value=9.3e-06 Score=67.52 Aligned_cols=112 Identities=18% Similarity=0.150 Sum_probs=61.2
Q ss_pred EEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--h--HH-HhhcCCC--------CCcceeEeecC----------Cc
Q 028437 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--G--VA-ADVGHIN--------TRSEVAGYMGN----------DQ 89 (209)
Q Consensus 33 IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~--~~-~dl~~~~--------~~~~v~~~~~~----------~d 89 (209)
|||||||+|++++..|++.+...+|+++.|.... + .. ..+.+.. ...+++.+.+. ++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 6999999999999999987752289999886421 1 11 1111111 02234433211 12
Q ss_pred hhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 90 LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 90 ~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
+++..+++|.|||+|+.... ..+..++...|+..++++++.+.+.... +++++|.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~-~~~~~~~~~~NV~gt~~ll~la~~~~~~-~~~~iST 135 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNF-NAPYSELRAVNVDGTRNLLRLAAQGKRK-RFHYIST 135 (249)
T ss_dssp HHHHHHH--EEEE--SS-SB-S-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEE
T ss_pred hhccccccceeeecchhhhh-cccchhhhhhHHHHHHHHHHHHHhccCc-ceEEecc
Confidence 33344789999999876432 2234457789999999999999854333 7777764
No 217
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.12 E-value=8.3e-06 Score=66.94 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
||+|+|+||+|++|..++..|++.|+ +|++++++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~ 35 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR 35 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence 46999999999999999999999998 999999864
No 218
>PRK06196 oxidoreductase; Provisional
Probab=98.11 E-value=4.2e-05 Score=65.63 Aligned_cols=112 Identities=19% Similarity=0.141 Sum_probs=66.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCC-CCcceeEeecCCchhhh-------cCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHIN-TRSEVAGYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~-~~~~v~~~~~~~d~~~a-------~~~aD 98 (209)
++|+|+||+|++|.+++..|++.|+ +|++.++++... ...++.... ...++.. .++.+++ +.+.|
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d---~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVEVVMLDLAD---LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC---HHHHHHHHHHHHhcCCCCC
Confidence 5799999999999999999999999 999999974221 112222111 0111111 1122222 34689
Q ss_pred EEEEcCCCCCCCC----CChhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 99 VVIIPAGVPRKPG----MTRDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~~g----~~r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
++|++||....+. ......+..|+.. ++.+.+.+++. ..++++++|.
T Consensus 102 ~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS 156 (315)
T PRK06196 102 ILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSS 156 (315)
T ss_pred EEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECC
Confidence 9999998643221 1123445666655 45555555543 3457777764
No 219
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.11 E-value=1.8e-05 Score=66.36 Aligned_cols=114 Identities=13% Similarity=-0.032 Sum_probs=65.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhH-HHhhcCCCCCcceeE-eecCCchhh-------hcCCCCE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGV-AADVGHINTRSEVAG-YMGNDQLGQ-------ALEDSDV 99 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~-~~dl~~~~~~~~v~~-~~~~~d~~~-------a~~~aD~ 99 (209)
++|+|+||+|++|++++..|+++|+ +|++.++++.... ..+....... .+.. +....++++ .+...|.
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATLADLAEKYGDRLL-PLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHhccCCee-EEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4799999999999999999999998 9999998742211 1111111100 0000 100112222 2346799
Q ss_pred EEEcCCCCCCCC---C---ChhHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecC
Q 028437 100 VIIPAGVPRKPG---M---TRDDLFNINAGIVKDLCSA----IAKYCPNAIVNMISN 146 (209)
Q Consensus 100 Vi~~ag~~~~~g---~---~r~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~sn 146 (209)
||+++|...... . +..+.+..|+.....+.+. +++.. ...++++|.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS 136 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISS 136 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcC
Confidence 999999753211 1 2334567787765555544 44433 345666653
No 220
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=98.11 E-value=0.0001 Score=62.70 Aligned_cols=100 Identities=20% Similarity=0.256 Sum_probs=61.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC---CcceeE-eecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT---RSEVAG-YMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~---~~~v~~-~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|||+|+|+ |.+|..++..|.+.|+ +|.++++++... ..+..... ...... ....++.++ .+++|+||++.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~ 74 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHL--DALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAV 74 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHH--HHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEec
Confidence 58999999 9999999999999998 999999954211 11111111 001110 011234444 48999999996
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCC
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNS 150 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~-~p~~~viv~snP~~~ 150 (209)
... .+.++++.+..+ .++..++...|..+.
T Consensus 75 k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~ 105 (304)
T PRK06522 75 KAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGH 105 (304)
T ss_pred ccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCc
Confidence 321 123444555543 356678888898773
No 221
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.11 E-value=2.7e-05 Score=63.41 Aligned_cols=115 Identities=20% Similarity=0.250 Sum_probs=65.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh---HHHhhcCCCCCcceeEee----cCCchhhh-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG---VAADVGHINTRSEVAGYM----GNDQLGQA------- 93 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~---~~~dl~~~~~~~~v~~~~----~~~d~~~a------- 93 (209)
+++|+|+||+|.+|+.++..|+++|+ ++.+..+..... ...++.... ..+..+. ..++++++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEALG--RRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCcCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999999 877765543211 111121111 1111111 11122222
Q ss_pred cCCCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 94 LEDSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+.+.|.||+++|...... .+ ..+.+..|+.....+.+.+.++ .....++++|.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS 143 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISS 143 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 246799999998643211 12 2345667777777777666322 23346666654
No 222
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.11 E-value=4.1e-05 Score=63.24 Aligned_cols=116 Identities=26% Similarity=0.233 Sum_probs=65.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhcC-------CCCE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQALE-------DSDV 99 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~~-------~aD~ 99 (209)
.+++|+||+|++|..++..|++.|. +|+++++++... ...++.........-+....+++.++++ +.|+
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3799999999999999999999998 999999874221 1222321111000000111112223333 5799
Q ss_pred EEEcCCCCCCCC---CChhH---HHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 100 VIIPAGVPRKPG---MTRDD---LFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 100 Vi~~ag~~~~~g---~~r~~---~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
||+++|...... .+..+ .+..|......+++.+... .+...++++|.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 136 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGS 136 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 999998643211 12222 2456666666666555332 23456666664
No 223
>PRK12742 oxidoreductase; Provisional
Probab=98.11 E-value=0.00012 Score=59.55 Aligned_cols=115 Identities=17% Similarity=0.224 Sum_probs=63.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcC-CCCCcceeEeecCCchhhh---cCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGH-INTRSEVAGYMGNDQLGQA---LEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~-~~~~~~v~~~~~~~d~~~a---~~~aD~Vi~~a 104 (209)
++|+|+||+|.+|+.++..|++.|. +|++.++.... ...++.. .......-+.....++.+. ....|++|+++
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 5899999999999999999999998 88887653211 1111111 0110000001000112222 34579999999
Q ss_pred CCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecC
Q 028437 105 GVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISN 146 (209)
Q Consensus 105 g~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~-~p~~~viv~sn 146 (209)
|...... .+ ....+..|+.....++..+.+. .+.+.++++|.
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 132 (237)
T PRK12742 84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGS 132 (237)
T ss_pred CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 8753211 12 2345667776666665444443 23456766654
No 224
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=98.11 E-value=3.6e-05 Score=67.36 Aligned_cols=69 Identities=17% Similarity=0.324 Sum_probs=48.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCC--------CccEEEEEecCC---chhHHHhhcCC--C--------CCcceeEeecCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNP--------LVSRLALYDIAN---TPGVAADVGHI--N--------TRSEVAGYMGND 88 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g--------~~~ev~l~D~~~---~~~~~~dl~~~--~--------~~~~v~~~~~~~ 88 (209)
||+|+|+ |..|.+++..|..++ + +|.+|.+++ .......++.. . .+..+.. ++
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~--~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~ 74 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEE--SVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VP 74 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCc--eEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---EC
Confidence 6999999 999999999999988 7 999999843 11222222211 1 1222332 46
Q ss_pred chhhhcCCCCEEEEcC
Q 028437 89 QLGQALEDSDVVIIPA 104 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~a 104 (209)
|+++++++||+||++.
T Consensus 75 dl~eal~~ADiIIlAV 90 (342)
T TIGR03376 75 DLVEAAKGADILVFVI 90 (342)
T ss_pred CHHHHHhcCCEEEEEC
Confidence 8889999999999984
No 225
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=98.10 E-value=7.6e-05 Score=63.63 Aligned_cols=99 Identities=11% Similarity=0.104 Sum_probs=61.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC-----Cccee-EeecCCchhhhcCCCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-----RSEVA-GYMGNDQLGQALEDSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~-----~~~v~-~~~~~~d~~~a~~~aD~Vi~ 102 (209)
|||+|+|+ |.+|..++..|.+.|+ +|.++++ +.. ...+.+... ..... .....++.+++.+++|+||+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PKR--AKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HHH--HHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence 68999999 9999999999999999 9999998 321 111222110 00000 00012344555689999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCC
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVN 149 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~ 149 (209)
+.... ...++++.+..+. ++..++.+.|..+
T Consensus 75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~ 106 (305)
T PRK12921 75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIG 106 (305)
T ss_pred Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCC
Confidence 96322 1233445555433 5567777889876
No 226
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.10 E-value=2.7e-05 Score=63.92 Aligned_cols=113 Identities=19% Similarity=0.212 Sum_probs=66.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
.++++|+||+|.+|++++..|+++|+ +|++++++... ....++. .. ..+..+. ...++++++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-AG--GRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-cC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999998 99999987421 1122222 11 1111111 111223332
Q ss_pred CCCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSA----IAKYCPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~sn 146 (209)
.+.|+||+++|..... ..+. .+.+..|+.....+.+. +++. ....++++|.
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS 140 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTAS 140 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECC
Confidence 3789999999864311 1122 23356777666554444 4433 3456666654
No 227
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=98.10 E-value=5.6e-05 Score=65.61 Aligned_cols=99 Identities=23% Similarity=0.268 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCC-----c-ce----eEeecCCchhhhcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTR-----S-EV----AGYMGNDQLGQALEDS 97 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~-----~-~v----~~~~~~~d~~~a~~~a 97 (209)
+|||+|+|+ |.+|..++..|.+.|+ +|.++|+++.. ..+...... . .. ..+..+++. ++++++
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 74 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG---DELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATA 74 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH---HHHHhcCceeecCCCcceecccceeEeccCh-hhccCC
Confidence 479999999 9999999999999999 99999985421 111111100 0 00 011113344 578899
Q ss_pred CEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCC
Q 028437 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVN 149 (209)
Q Consensus 98 D~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~-~p~~~viv~snP~~ 149 (209)
|+||++...+. ..++++.+... .++..++..+|..+
T Consensus 75 D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~ 111 (341)
T PRK08229 75 DLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVR 111 (341)
T ss_pred CEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCC
Confidence 99999963221 12334445444 35666777788776
No 228
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.10 E-value=7.5e-05 Score=61.34 Aligned_cols=110 Identities=22% Similarity=0.239 Sum_probs=65.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhh-------cCCCCEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQA-------LEDSDVV 100 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a-------~~~aD~V 100 (209)
++++|+||+|++|+.++..|++.|+ +|++++++... ....... .+. ++...+++++. +...|+|
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~~~-----~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAFLT-----QEDYPFA-TFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecchhh-----hcCCceE-EEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999 99999986410 0000000 000 01011122232 3357999
Q ss_pred EEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 101 IIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 101 i~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
|+++|..... ..+ ....+..|+.....+++.+... ...+.++++|.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss 135 (252)
T PRK08220 81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGS 135 (252)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 9999875311 112 2345677777666666665432 23456666664
No 229
>PRK09186 flagellin modification protein A; Provisional
Probab=98.10 E-value=2.6e-05 Score=64.29 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.++|+|+||+|.+|.+++..|++.|+ +|++.++++
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~ 38 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK 38 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence 45899999999999999999999999 999998864
No 230
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.09 E-value=0.0001 Score=60.99 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=66.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~ 95 (209)
++|+|+||+|++|.+++..|++.|+ +|+++|++... ....++........+..+. ..++++++ +.
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3799999999999999999999998 99999986421 1112222110000111111 11112222 24
Q ss_pred CCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHH----HHHHHHHhhCCCeEEEEecCC
Q 028437 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVK----DLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~----~i~~~i~~~~p~~~viv~snP 147 (209)
..|+||+++|.+... ..+. ...+..|+.... .+.+.+.+..+.+.++++|..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~ 142 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK 142 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence 679999999875421 1222 233566766544 444444444434677777553
No 231
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.09 E-value=6.6e-05 Score=60.95 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=69.0
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeE--eecCCchhhhc-------CCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAG--YMGNDQLGQAL-------EDSD 98 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~--~~~~~d~~~a~-------~~aD 98 (209)
|+|+|++|++|+.++..|+++|+ +|++++++.. .....++.+......... +....++++++ ...|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 57999999999999999999998 9999988531 112222322211111111 11111223333 3469
Q ss_pred EEEEcCCCCCCC---C---CChhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 99 VVIIPAGVPRKP---G---MTRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 99 ~Vi~~ag~~~~~---g---~~r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
+||+++|..... . .+..+.+..|+.....+.+.+.++ .....++++|..
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 999999864311 1 123445678888888888877654 234567777654
No 232
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.09 E-value=3.4e-05 Score=62.58 Aligned_cols=114 Identities=16% Similarity=0.207 Sum_probs=67.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhh---cC--CCCEEEEc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQA---LE--DSDVVIIP 103 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a---~~--~aD~Vi~~ 103 (209)
++++|+||+|.+|++++..|++.|. +|+++++++.. ..++.........-++....++++. +. ..|+||++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAA--LAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHH--HHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEEC
Confidence 4799999999999999999999998 99999987421 1122221111000001111122222 33 47999999
Q ss_pred CCCCCC---C--CCC---hhHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecC
Q 028437 104 AGVPRK---P--GMT---RDDLFNINAGIVKDLCSAIAKYC--PNAIVNMISN 146 (209)
Q Consensus 104 ag~~~~---~--g~~---r~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~sn 146 (209)
+|.... + ..+ ....+..|+.....+.+.+.++- ..+.+++++.
T Consensus 78 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS 130 (222)
T PRK06953 78 AGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS 130 (222)
T ss_pred CCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence 987521 1 112 23456788888788877776532 2345555543
No 233
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.09 E-value=1.7e-05 Score=64.53 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=62.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC------CCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE------DSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~------~aD~Vi~ 102 (209)
++|+|+||+|.+|..++..|+++|+ +|++++++.......++... ++...++.+++++ +.|+||+
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGH--QVIGIARSAIDDFPGELFAC-------DLADIEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCcccccCceEEEe-------eCCCHHHHHHHHHHHHHhCCCcEEEE
Confidence 5899999999999999999999998 99999996532100000000 0111112222232 6899999
Q ss_pred cCCCCCCCC---CCh---hHHHHHHHHHHHHHH----HHHHhhCCCeEEEEecC
Q 028437 103 PAGVPRKPG---MTR---DDLFNINAGIVKDLC----SAIAKYCPNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~~~g---~~r---~~~~~~N~~~~~~i~----~~i~~~~p~~~viv~sn 146 (209)
++|.....- .+. .+.+..|+.....+. +.+++. ...+++++|-
T Consensus 75 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS 127 (234)
T PRK07577 75 NVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNICS 127 (234)
T ss_pred CCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcc
Confidence 998743211 122 233455655544444 444443 3356666653
No 234
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.08 E-value=4.5e-05 Score=65.98 Aligned_cols=97 Identities=14% Similarity=0.362 Sum_probs=62.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC----------CCCcceeEeecCCchhhhc-CCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI----------NTRSEVAGYMGNDQLGQAL-EDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~----------~~~~~v~~~~~~~d~~~a~-~~a 97 (209)
|||+|+|| |.+|..++..|.+.|+ +|.++++++. ....+... ..+..+.. ++++++++ .++
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~--~~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~ 72 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHT--TFESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA 72 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHH--HHHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence 58999999 9999999999999998 9999999642 12222211 01112222 34666666 589
Q ss_pred CEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHh-h-CCCeEEEEecCCCC
Q 028437 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAK-Y-CPNAIVNMISNPVN 149 (209)
Q Consensus 98 D~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~-~-~p~~~viv~snP~~ 149 (209)
|+||++.-. ..+.++++.+.. + .++..++..+|-.+
T Consensus 73 Dliiiavks----------------~~~~~~l~~l~~~~l~~~~~vv~~~nGi~ 110 (326)
T PRK14620 73 TCIILAVPT----------------QQLRTICQQLQDCHLKKNTPILICSKGIE 110 (326)
T ss_pred CEEEEEeCH----------------HHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence 999998521 223445555554 3 35556677777654
No 235
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.07 E-value=3.1e-05 Score=66.06 Aligned_cols=115 Identities=22% Similarity=0.156 Sum_probs=67.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEee----cCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYM----GNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~ 95 (209)
++|+|+||+|++|.+++..|++.|. +|++++++.... ...++........+..+. ..++.+++ +.
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5899999999999999999999998 999999874221 122232110001111111 11112222 33
Q ss_pred CCCEEEEcCCCCCCCC----CChhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPG----MTRDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g----~~r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
..|++|++||....+. ......+..|+.. ++.+.+.+++. ..+++|++|.
T Consensus 95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS 152 (306)
T PRK06197 95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSS 152 (306)
T ss_pred CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECC
Confidence 6899999998643211 1123345666665 66666666653 3457777764
No 236
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.07 E-value=4.9e-05 Score=62.21 Aligned_cols=115 Identities=23% Similarity=0.303 Sum_probs=66.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
+++++|+|++|.+|..++..|+++|. +|+++++++.. ....++..... .+..+. ..+++++++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRSTGV--KAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhCCC--cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999998 99999997421 11122222111 111111 111222222
Q ss_pred CCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecCC
Q 028437 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSA----IAKYCPNAIVNMISNP 147 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~snP 147 (209)
...|++|+++|..... ..+ ....+..|+.....+.+. +.+. ....++++|..
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~ 143 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSI 143 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccH
Confidence 3589999999864321 111 233456666655544444 4432 23567777643
No 237
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.06 E-value=5.5e-05 Score=62.05 Aligned_cols=115 Identities=17% Similarity=0.284 Sum_probs=68.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC-c--hhHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-T--PGVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~-~--~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
.+++|+||+|.+|++++..|++.|. ++++.++.. . .....++.+... ++..+. ...++.+++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEGH--DVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999998 887765432 1 112223332211 111111 111222333
Q ss_pred CCCCEEEEcCCCCCCCC------CChhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 95 EDSDVVIIPAGVPRKPG------MTRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g------~~r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
...|+||+++|...... .+..+.+..|+.....+.+.+.++ .....++++|..
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 144 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSI 144 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcch
Confidence 34799999998753211 123445678888777777776653 234567777653
No 238
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.06 E-value=3.8e-05 Score=66.02 Aligned_cols=115 Identities=18% Similarity=0.111 Sum_probs=65.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEe----ecCCchhh-------hcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGY----MGNDQLGQ-------ALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~----~~~~d~~~-------a~~ 95 (209)
++++|+||+|.+|..++..|++.|. +|++.+++..+. ...++........+..+ ...++.++ ...
T Consensus 15 k~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999998 999999975321 22233221100111111 01111222 234
Q ss_pred CCCEEEEcCCCCCCCC-----CChhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCC
Q 028437 96 DSDVVIIPAGVPRKPG-----MTRDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g-----~~r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~snP 147 (209)
..|++|+.||....+. ......+..|... ++.+.+.+++. .++++++|.-
T Consensus 93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~ 151 (313)
T PRK05854 93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSI 151 (313)
T ss_pred CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEech
Confidence 5899999998743221 1223345556554 44555555432 3566666643
No 239
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.06 E-value=3.1e-05 Score=64.14 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeEee----cCCchhhhc-----
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM----GNDQLGQAL----- 94 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~----- 94 (209)
..++++|+||+|++|.+++..|++.|. ++++.++... .....++.... ..+..+. ..+++++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 345899999999999999999999998 8888766421 11112222111 1121111 111222233
Q ss_pred --CCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhhC---CCeEEEEec
Q 028437 95 --EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC---PNAIVNMIS 145 (209)
Q Consensus 95 --~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~~---p~~~viv~s 145 (209)
...|+||+++|..... ..+ ....+..|+.....+.+.+.++. ....+++++
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 3479999999864321 112 23457788887777777766543 234555553
No 240
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.05 E-value=5.9e-05 Score=67.46 Aligned_cols=103 Identities=18% Similarity=0.219 Sum_probs=64.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcc-ee-EeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSE-VA-GYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~-v~-~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
.++|+|+||+|.+|++++..|++.|. +|+++++++... ...+.+...... +. ++...+++++.+.+.|++|+.||
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~l-~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDKI-TLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHH-HHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 45899999999999999999999998 999999864211 111211111111 11 11111234556789999999998
Q ss_pred CCCCCCCCh---hHHHHHHHHHHHHHHHHHH
Q 028437 106 VPRKPGMTR---DDLFNINAGIVKDLCSAIA 133 (209)
Q Consensus 106 ~~~~~g~~r---~~~~~~N~~~~~~i~~~i~ 133 (209)
.......+. .+.++.|+.....+.+.+.
T Consensus 255 i~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 255 INVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 754333332 3456778776666666544
No 241
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.05 E-value=0.00058 Score=57.08 Aligned_cols=118 Identities=22% Similarity=0.195 Sum_probs=68.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCc-c-ee-EeecCCch-------hhhcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRS-E-VA-GYMGNDQL-------GQALED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~-~-v~-~~~~~~d~-------~~a~~~ 96 (209)
++++|+||+|.+|..++..|++.|. +|+++++++.. ....++....... . +. ++...++. .+.+..
T Consensus 1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 3799999999999999999999998 89999986421 1122332211100 0 00 11101111 122446
Q ss_pred CCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHh----hCCCeEEEEecCCC
Q 028437 97 SDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAK----YCPNAIVNMISNPV 148 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~----~~p~~~viv~snP~ 148 (209)
.|++|+++|...... .+ ....+..|+.....+++.+.. ....+.++++|...
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 140 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA 140 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence 899999998643111 12 234567777777666666543 22345777776543
No 242
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.04 E-value=5.1e-05 Score=62.74 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
++|+|+||+|++|.+++..|++.|+ +|+++++++
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~ 41 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP 41 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence 5899999999999999999999998 999999864
No 243
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.04 E-value=4.7e-05 Score=62.86 Aligned_cols=117 Identities=22% Similarity=0.311 Sum_probs=67.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE--eecCCchhhh-------cCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG--YMGNDQLGQA-------LED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~--~~~~~d~~~a-------~~~ 96 (209)
.++++|+||+|.+|.+++..|++.|. +|++.++++.. ....++.+......... ....+++++. +..
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 34899999999999999999999998 99999987421 12223332211000000 1011112222 345
Q ss_pred CCEEEEcCCCCCC-C--CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~-~--g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
.|+||+++|.... + ..+ ....+..|+.....+.+.+.++ ...++++++|.
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS 145 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 7999999986421 1 112 2335677776666666555543 23456777654
No 244
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.04 E-value=9e-05 Score=61.29 Aligned_cols=115 Identities=15% Similarity=0.175 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhh-------cCCCCEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQA-------LEDSDVV 100 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a-------~~~aD~V 100 (209)
.++++|+||+|.+|..++..|++.|. +|++.+++.. ....++.+.......-++....+++++ +...|++
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 36899999999999999999999998 8888766431 112222221110000011111122222 3467999
Q ss_pred EEcCCCCCCC---CCC---hhHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 101 IIPAGVPRKP---GMT---RDDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 101 i~~ag~~~~~---g~~---r~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
|+++|..... ..+ ....+..|+.. ++.+++.+++. ..+.+|++|.
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS 138 (255)
T PRK06463 84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIAS 138 (255)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 9999875311 112 22345667666 45666666543 3456777663
No 245
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=98.04 E-value=0.00012 Score=63.09 Aligned_cols=103 Identities=14% Similarity=0.221 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHH---hhcCCCCCcceeEeecCCchhhhcCCCCEEEEc
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAA---DVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~---dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ 103 (209)
.+|||+|+|+ |.+|..++..|.+.|+ +|.++.+++...... .+........+......++. ++...+|+||++
T Consensus 4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vila 79 (313)
T PRK06249 4 ETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQAYRSA-EDMPPCDWVLVG 79 (313)
T ss_pred cCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceEEcch-hhcCCCCEEEEE
Confidence 4479999999 9999999999999999 999999975221111 01100000011001111222 356789999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCC
Q 028437 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVN 149 (209)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~-~p~~~viv~snP~~ 149 (209)
.-... ..+.++.+... .++..++...|-.+
T Consensus 80 vK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~ 110 (313)
T PRK06249 80 LKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLG 110 (313)
T ss_pred ecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCC
Confidence 53221 12233334333 36677777888766
No 246
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.04 E-value=0.00026 Score=58.03 Aligned_cols=116 Identities=20% Similarity=0.208 Sum_probs=66.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee-cCCc---h-------hhhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM-GNDQ---L-------GQALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~-~~~d---~-------~~a~~ 95 (209)
++++|+||+|.+|.+++..|++.|. +|++.++++.. ....++........+..+. +.++ + .+.+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999998 99999987521 1122222211011111111 1111 1 22345
Q ss_pred CCCEEEEcCCCCCCCCC---C---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPGM---T---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g~---~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..|++|+++|....... + ..+.+..|+.....+.+.+.+. .....++++|.
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 140 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISS 140 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 78999999987532211 1 1234567776666666554322 22345666654
No 247
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.03 E-value=0.00022 Score=61.91 Aligned_cols=115 Identities=14% Similarity=0.135 Sum_probs=65.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcc-ee-EeecCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSE-VA-GYMGNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~-v~-~~~~~~d~~~a-------~~~a 97 (209)
++|+|+||+|.+|..++..|++.|+ +|+++++++. .....++........ +. ++...++++++ +...
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 5899999999999999999999998 9999998742 112223322111100 00 11111122222 3468
Q ss_pred CEEEEcCCCCCCC---CCChh---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEecC
Q 028437 98 DVVIIPAGVPRKP---GMTRD---DLFNINA----GIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~~---g~~r~---~~~~~N~----~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
|++|+++|..... ..+.. ..+..|+ ..++.+.+.+.+. ..+.+|++|.
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS 144 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGS 144 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCC
Confidence 9999999864311 11222 2344444 3445566666543 3456777764
No 248
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.03 E-value=4.9e-05 Score=62.99 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=66.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCCCCCcceeEee----cCCchhhhc-------CC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYM----GNDQLGQAL-------ED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~~~~~~v~~~~----~~~d~~~a~-------~~ 96 (209)
++|+|+||+|.+|..++..|++.|+ +|++++++.. ......+.... ..+..+. ..++.++.+ ..
T Consensus 16 k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999 9999988631 11111222111 1111111 111222233 36
Q ss_pred CCEEEEcCCCCCC-C--CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 028437 97 SDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNP 147 (209)
Q Consensus 97 aD~Vi~~ag~~~~-~--g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP 147 (209)
.|++|+++|.... + ..+ ..+.+..|+.....+.+.+.++ ...+.++++|..
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~ 151 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASM 151 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCH
Confidence 7999999986431 1 112 2334566766655555444432 234567777654
No 249
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.03 E-value=0.00029 Score=58.03 Aligned_cols=118 Identities=19% Similarity=0.182 Sum_probs=66.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEec-CCc--hhHHHhhcCCCCC-----cceeEeecC----Cchhhhc-
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI-ANT--PGVAADVGHINTR-----SEVAGYMGN----DQLGQAL- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~-~~~--~~~~~dl~~~~~~-----~~v~~~~~~----~d~~~a~- 94 (209)
.++++|+||+|++|.+++..|++.|. +|.+.+. +.. .....++...... .++...... .+..+.+
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 35899999999999999999999998 8888753 221 1112223221100 011100000 0111111
Q ss_pred -----CCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCC
Q 028437 95 -----EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNP 147 (209)
Q Consensus 95 -----~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP 147 (209)
...|++|++||..... ..+ ....+..|+.....+++++.+.- ..+.+|++|..
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~ 146 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 146 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence 2689999999964211 112 23445678777777666655442 34677777644
No 250
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.02 E-value=4.6e-05 Score=62.94 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=69.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCccee--EeecCCchhhhc-------CC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVA--GYMGNDQLGQAL-------ED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~--~~~~~~d~~~a~-------~~ 96 (209)
.++|+|+||+|.+|+.++..|++.|. +|+++++++. .....++.......... ++...+++++++ ..
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999998 9999999742 11222232211100000 011111222222 34
Q ss_pred CCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCC
Q 028437 97 SDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (209)
Q Consensus 97 aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP~ 148 (209)
.|.+|+++|..... ..+ ..+.+..|+.....+.+.+.+. ...+.++++|...
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 149 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIA 149 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeech
Confidence 69999999864311 111 2234667777666666555432 2345677776543
No 251
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.02 E-value=3.9e-05 Score=64.03 Aligned_cols=117 Identities=18% Similarity=0.182 Sum_probs=68.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE--eecCCchhhhc-------CCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG--YMGNDQLGQAL-------EDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~--~~~~~d~~~a~-------~~a 97 (209)
.+|+|+||+|.+|..++..|+..|+ +|+++++++.. ....++........+.. +...+++++++ ...
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999998 99999986421 11122222111000000 11111222322 357
Q ss_pred CEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecCC
Q 028437 98 DVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKYC--PNAIVNMISNP 147 (209)
Q Consensus 98 D~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~snP 147 (209)
|++|+++|..... ..+. ...+..|+.....+.+++.+.- +.+.++++|.+
T Consensus 88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~ 145 (264)
T PRK07576 88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAP 145 (264)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECCh
Confidence 9999998754211 1222 2345678777777776665431 34577777654
No 252
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.02 E-value=6.5e-05 Score=63.28 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=67.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEe----ecCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGY----MGNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~~ 95 (209)
+.++|+||+|.+|++++..|++.|. +|++.|+++. .....++..... ++..+ ...++++++ +.
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEGF--DVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4699999999999999999999998 9999998742 112223332211 11111 111122222 23
Q ss_pred CCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHHHH----hhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIA----KYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~i~----~~~p~~~viv~sn 146 (209)
..|++|+.||..... ..+. ...+..|+.....+.+.+. +....+.++++|.
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS 143 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS 143 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 579999999874311 1222 2345677766666555543 3333456777764
No 253
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.02 E-value=6.3e-05 Score=61.63 Aligned_cols=110 Identities=22% Similarity=0.213 Sum_probs=68.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee-cCCc----------hhhhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM-GNDQ----------LGQALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~-~~~d----------~~~a~~ 95 (209)
++|+|+||+|++|+.++..|++.|. +|+++++++.. ....++.. .+..+. +..+ .++.+.
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAELGE-----SALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHhCC-----ceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4899999999999999999999998 99999986421 11111211 111110 0111 122235
Q ss_pred CCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEec
Q 028437 96 DSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMIS 145 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~s 145 (209)
..|++|+++|...... .+ ....+..|+.....+.+++.++- ....+++++
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~ 136 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG 136 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 7899999998643211 12 23457788888888888887542 223455554
No 254
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.02 E-value=0.00013 Score=64.24 Aligned_cols=133 Identities=17% Similarity=0.225 Sum_probs=79.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHH-----HhhcCCCC---------CcceeEeecCCchhhhc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVA-----ADVGHINT---------RSEVAGYMGNDQLGQAL 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~-----~dl~~~~~---------~~~v~~~~~~~d~~~a~ 94 (209)
++|+|+|- |+||..++..++..|+ +|..+|+++..-.. ..+.+.+. ..+++. |+|. +.+
T Consensus 10 ~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~l 82 (436)
T COG0677 10 ATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EEL 82 (436)
T ss_pred eEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hhc
Confidence 69999999 9999999999999999 99999998521100 00111110 123333 4565 557
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCe--EEEEecCCCCCcHHHHHHHHHHhCCC--CCCcE
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNA--IVNMISNPVNSTVPIAAEVFKKAGTY--NEKKL 170 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~--~viv~snP~~~~~~i~~~~~~~~~~~--p~~~v 170 (209)
+.||++++|+-.|-....+ -.+..+.+-++.+.++-..+ .++=.|-|.+++--++-.++...+|+ +.+..
T Consensus 83 ~~~dv~iI~VPTPl~~~~~------pDls~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL~~~~Df~ 156 (436)
T COG0677 83 KECDVFIICVPTPLKKYRE------PDLSYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGLKFGEDFY 156 (436)
T ss_pred ccCCEEEEEecCCcCCCCC------CChHHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCCcccceee
Confidence 7999999998776543221 12344455556666554333 33334677776544444444443543 44555
Q ss_pred EEEe
Q 028437 171 FGVT 174 (209)
Q Consensus 171 ig~~ 174 (209)
+++|
T Consensus 157 lays 160 (436)
T COG0677 157 LAYS 160 (436)
T ss_pred EeeC
Confidence 6665
No 255
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.01 E-value=7e-05 Score=62.52 Aligned_cols=116 Identities=22% Similarity=0.186 Sum_probs=65.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE--eecCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG--YMGNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~--~~~~~d~~~a-------~~~a 97 (209)
|+|+|+||+|.+|..++..|++.|. +|++.+++... ....++........... +...+++++. +...
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999998 99999986421 11222322211100000 1001122222 2468
Q ss_pred CEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHH----HHHHHHhhCCCeEEEEecCC
Q 028437 98 DVVIIPAGVPRKP---GMTR---DDLFNINAGIVKD----LCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 98 D~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~----i~~~i~~~~p~~~viv~snP 147 (209)
|++|+++|..... ..+. ...+..|+..... +.+.+++.. ...++++|..
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~ 137 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASM 137 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECCh
Confidence 9999999865321 1122 2245667554444 444454433 3466666543
No 256
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.01 E-value=8.5e-05 Score=61.76 Aligned_cols=113 Identities=19% Similarity=0.297 Sum_probs=67.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchh-------hhcCCCCEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLG-------QALEDSDVVI 101 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~-------~a~~~aD~Vi 101 (209)
++++|+||+|.+|..++..|+++|. +|++.++++.......... ...++. ..++++ +.+...|++|
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~--~~~D~~---~~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHGGDGQHENYQF--VPTDVS---SAEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCccccccCceEE--EEccCC---CHHHHHHHHHHHHHHcCCCCEEE
Confidence 5899999999999999999999999 9999998642111000000 000111 011222 2234679999
Q ss_pred EcCCCCCCC------------CCCh---hHHHHHHHHHHHHHHHHHHhhC---CCeEEEEecCCC
Q 028437 102 IPAGVPRKP------------GMTR---DDLFNINAGIVKDLCSAIAKYC---PNAIVNMISNPV 148 (209)
Q Consensus 102 ~~ag~~~~~------------g~~r---~~~~~~N~~~~~~i~~~i~~~~---p~~~viv~snP~ 148 (209)
++||..... ..+. ...+..|+.....+.+.+.++- +.+.++++|...
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 147 (266)
T PRK06171 83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEA 147 (266)
T ss_pred ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccc
Confidence 999864210 1122 2356678777777776665442 335677776543
No 257
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.00 E-value=0.00011 Score=59.98 Aligned_cols=114 Identities=20% Similarity=0.311 Sum_probs=66.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEE-ecCCch--hHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALY-DIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~-D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
++|+|+||+|++|..++..|++.|+ ++++. ++++.. .....+.... ..+..+. ..+++.+.+
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEEG--GDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4899999999999999999999998 88888 886421 1112222211 1111111 011222223
Q ss_pred CCCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhhC---CCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKYC---PNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~~---p~~~viv~sn 146 (209)
.+.|.||+++|...... .+ ..+.+..|......+.+.+.... ....++++|.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 142 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS 142 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 27899999998752111 11 23456678877666666655432 2345666654
No 258
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.00 E-value=3.2e-05 Score=64.30 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.++++|+||+|.+|.+++..|++.|. +|++++++.
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 39 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA 39 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35899999999999999999999999 999999864
No 259
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.00 E-value=4.6e-05 Score=63.17 Aligned_cols=116 Identities=22% Similarity=0.226 Sum_probs=67.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEe----ecCCchhhhc-------C
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGY----MGNDQLGQAL-------E 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~----~~~~d~~~a~-------~ 95 (209)
++++|+||+|.+|.+++..|++.|. +|+++++++. .....++.......++..+ ...+++++++ .
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5799999999999999999999998 9999999742 1222233321001111111 1111222332 4
Q ss_pred CCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..|++|++||..... ..+ ....+..|+.....+.+.+.++ ...+.++++|.
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 145 (260)
T PRK07063 86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS 145 (260)
T ss_pred CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECC
Confidence 689999999864311 112 2234556766655555554322 23467777754
No 260
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.00 E-value=0.00015 Score=60.02 Aligned_cols=115 Identities=21% Similarity=0.195 Sum_probs=64.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCCCCCcc-ee-EeecCCchhhh-------cCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSE-VA-GYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~~~~~~-v~-~~~~~~d~~~a-------~~~aD 98 (209)
++++|+||+|++|.+++..|++.|. +|+++|+++. .....++........ +. ++...++.+++ +...|
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 5899999999999999999999998 9999999642 111222322111100 01 11111112222 34689
Q ss_pred EEEEcCCCCC--CC--CCCh---hHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 99 VVIIPAGVPR--KP--GMTR---DDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~--~~--g~~r---~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
++|++||... .+ ..+. ...+..|+.. ++.+.+.+.+.. .++++++|.
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS 144 (260)
T PRK12823 87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSS 144 (260)
T ss_pred EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcC
Confidence 9999998532 11 1122 2234555543 445555555433 346666654
No 261
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.99 E-value=2.3e-05 Score=64.04 Aligned_cols=113 Identities=19% Similarity=0.189 Sum_probs=68.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC-CCCccee-EeecCCchhhhc---CCCCEEEEc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI-NTRSEVA-GYMGNDQLGQAL---EDSDVVIIP 103 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~-~~~~~v~-~~~~~~d~~~a~---~~aD~Vi~~ 103 (209)
++++|+||+|++|.+++..|++.|+ +|+++++++... .++... ... .+. ++...+++++++ ...|+||++
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCE-PLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCe-EEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 5899999999999999999999998 999999864211 111111 000 011 111111233333 357999999
Q ss_pred CCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhhC----CCeEEEEecC
Q 028437 104 AGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKYC----PNAIVNMISN 146 (209)
Q Consensus 104 ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~~----p~~~viv~sn 146 (209)
+|...... .+ ..+.+..|+.....+++.+.+.. ...+++++|.
T Consensus 85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 137 (245)
T PRK07060 85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137 (245)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence 98753211 12 22345677777777777665532 2356777764
No 262
>PRK06128 oxidoreductase; Provisional
Probab=97.99 E-value=9.2e-05 Score=63.07 Aligned_cols=114 Identities=22% Similarity=0.232 Sum_probs=70.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc----hhHHHhhcCCCCCcceeEe----ecCCchhh-------h
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT----PGVAADVGHINTRSEVAGY----MGNDQLGQ-------A 93 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~----~~~~~dl~~~~~~~~v~~~----~~~~d~~~-------a 93 (209)
++|+|+||+|.+|.+++..|++.|. +|++.+++.. ......+..... ++..+ ...++.++ .
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEGR--KAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcCC--eEEEEecCCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999998 8888776431 111122222111 11111 01112222 2
Q ss_pred cCCCCEEEEcCCCCCCC----CCC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 94 LEDSDVVIIPAGVPRKP----GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~~----g~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
+...|++|++||..... ..+ ....+..|+.....+++.+.++- +...+|++|.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 34689999999864211 112 34467888888888888887653 3457777654
No 263
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.98 E-value=0.00031 Score=58.15 Aligned_cols=112 Identities=13% Similarity=0.190 Sum_probs=63.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chh----HHHhhcCCCCCcceeEe----ecCCchhhh-----
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPG----VAADVGHINTRSEVAGY----MGNDQLGQA----- 93 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~----~~~dl~~~~~~~~v~~~----~~~~d~~~a----- 93 (209)
++++|+||+|.+|.+++..|++.|. ++++++++. ... ...++..... ++..+ ...+++++.
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAGA--KAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhCC--cEEEEecCcCCHHHHHHHHHHHH
Confidence 5899999999999999999999998 877776532 111 1122221111 11111 111122222
Q ss_pred --cCCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe
Q 028437 94 --LEDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMI 144 (209)
Q Consensus 94 --~~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~ 144 (209)
+...|++|++||..... ..+ ....+..|+.....+++.+.+.. +.+.++++
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~ 144 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTL 144 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEE
Confidence 24679999999874211 112 23456678777766777666543 33444444
No 264
>PRK08589 short chain dehydrogenase; Validated
Probab=97.98 E-value=0.00021 Score=59.91 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=65.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCCCCCcc-ee-EeecCCchhh-------hcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSE-VA-GYMGNDQLGQ-------ALEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~~~~~~-v~-~~~~~~d~~~-------a~~~aD 98 (209)
++++|+||+|.+|..++..|++.|. +|+++++++. .....++.+...... +. ++...++.++ .+...|
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD 84 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence 4899999999999999999999998 9999998731 112223332211100 10 0111112222 234579
Q ss_pred EEEEcCCCCCCCC----CCh---hHHHHHHHHHHH----HHHHHHHhhCCCeEEEEecCC
Q 028437 99 VVIIPAGVPRKPG----MTR---DDLFNINAGIVK----DLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 99 ~Vi~~ag~~~~~g----~~r---~~~~~~N~~~~~----~i~~~i~~~~p~~~viv~snP 147 (209)
++|++||.....+ .+. ...+..|+.... .+.+.+.+. .+.++++|..
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~ 142 (272)
T PRK08589 85 VLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSF 142 (272)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCch
Confidence 9999998753211 122 223455655444 444444432 3677777654
No 265
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.97 E-value=4.6e-05 Score=57.42 Aligned_cols=97 Identities=25% Similarity=0.350 Sum_probs=55.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
.+||.|||+ |.+|.+|+..|.+.|+ +|..+-... .....++...... .. ..++++.++++|++|+++ |
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~~~--~~----~~~~~~~~~~aDlv~iav--p 77 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFIGA--GA----ILDLEEILRDADLVFIAV--P 77 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC--TT-----------TTGGGCC-SEEEE-S---
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccccc--cc----ccccccccccCCEEEEEe--c
Confidence 369999999 9999999999999999 887765432 1122222222111 11 124567889999999995 2
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhh--C-CCeEEEEecCCCCC
Q 028437 108 RKPGMTRDDLFNINAGIVKDLCSAIAKY--C-PNAIVNMISNPVNS 150 (209)
Q Consensus 108 ~~~g~~r~~~~~~N~~~~~~i~~~i~~~--~-p~~~viv~snP~~~ 150 (209)
+ +.+.++++++..+ . |+..++-.|...++
T Consensus 78 ---D-----------daI~~va~~La~~~~~~~g~iVvHtSGa~~~ 109 (127)
T PF10727_consen 78 ---D-----------DAIAEVAEQLAQYGAWRPGQIVVHTSGALGS 109 (127)
T ss_dssp ---C-----------CHHHHHHHHHHCC--S-TT-EEEES-SS--G
T ss_pred ---h-----------HHHHHHHHHHHHhccCCCCcEEEECCCCChH
Confidence 1 2346777888766 2 55566666665443
No 266
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.97 E-value=8.5e-05 Score=64.24 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=67.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeE--eecCCc-------hhhhcCC-
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAG--YMGNDQ-------LGQALED- 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~--~~~~~d-------~~~a~~~- 96 (209)
..++|+||+|.+|.+++..|+++|. +|+++++++. +....++........+.. .+-+++ +.+.+.+
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5899999999999999999999998 9999999752 222233332110011111 111111 2233343
Q ss_pred -CCEEEEcCCCCCC---C--CCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 97 -SDVVIIPAGVPRK---P--GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 97 -aD~Vi~~ag~~~~---~--g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
.|++|+.||.... + ..+. .+.+..|+.....+.+.+... ...+.++++|.
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS 193 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS 193 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 5599999987531 1 1222 235667776666555554332 23456777764
No 267
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.97 E-value=3.3e-05 Score=57.43 Aligned_cols=72 Identities=25% Similarity=0.362 Sum_probs=45.0
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHH-HhhcCC-CCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVA-ADVGHI-NTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~-~dl~~~-~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
||+|+||+|++|+.++..|.....+.-+.++++....++. .+.... .....+... ..+ .+.+.++|+||.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVE--DAD-PEELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEE--ETS-GHHHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEe--ecc-hhHhhcCCEEEecC
Confidence 7999999999999999999997767667777775422221 111111 111122221 123 46679999999995
No 268
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.96 E-value=0.00015 Score=60.08 Aligned_cols=114 Identities=20% Similarity=0.244 Sum_probs=67.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEee----cCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM----GNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~~a 97 (209)
+.++|+|++|.+|.+++..|++.|. +|+++|+........++..... .+..+. ..++.++. +...
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALGR--RFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999998 9998887542222222322110 111110 11122222 2368
Q ss_pred CEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHh----hCCCeEEEEecC
Q 028437 98 DVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAK----YCPNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~----~~p~~~viv~sn 146 (209)
|++|++||..... ..+ ....+..|+.....+.+.+.+ ..+.+.++++|.
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS 145 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS 145 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECc
Confidence 9999999875311 112 334566777766655555443 234567777664
No 269
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.96 E-value=0.00012 Score=62.17 Aligned_cols=114 Identities=14% Similarity=0.126 Sum_probs=71.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch---hHHHhhcCCCCCcceeEee----cCCchhhhc-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHINTRSEVAGYM----GNDQLGQAL------- 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~---~~~~dl~~~~~~~~v~~~~----~~~d~~~a~------- 94 (209)
++|+|+||+|.+|++++..|++.|. +|++++++... .....+.... .++..+. ..+++++.+
T Consensus 47 k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKEG--VKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999998 99999886421 1122222211 1111110 111222222
Q ss_pred CCCCEEEEcCCCCCCC----CCC---hhHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKP----GMT---RDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~----g~~---r~~~~~~N~~~~~~i~~~i~~~-~p~~~viv~sn 146 (209)
...|+||++||..... ..+ ....+..|+.....+++.+.+. .+.+.+|++|.
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 3579999999864211 112 2345778888888888887764 24456777764
No 270
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.96 E-value=0.00014 Score=60.45 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEecCCch---hHHHhhcCCCCCcceeEe--e--cCCch----hh
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTP---GVAADVGHINTRSEVAGY--M--GNDQL----GQ 92 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g-~~~ev~l~D~~~~~---~~~~dl~~~~~~~~v~~~--~--~~~d~----~~ 92 (209)
..+.++|+|+||+|.+|.+++..|+++| . +|+++++++.. ....++..... .++..+ . ..++. ++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~ 81 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAGA-SSVEVIDFDALDTDSHPKVIDA 81 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcCC-CceEEEEecCCChHHHHHHHHH
Confidence 3456789999999999999999999885 7 99999987532 12233332211 011111 1 11121 22
Q ss_pred hc--CCCCEEEEcCCCCCCCCC---Ch---hHHHHHHHHHH----HHHHHHHHhhCCCeEEEEecC
Q 028437 93 AL--EDSDVVIIPAGVPRKPGM---TR---DDLFNINAGIV----KDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 93 a~--~~aD~Vi~~ag~~~~~g~---~r---~~~~~~N~~~~----~~i~~~i~~~~p~~~viv~sn 146 (209)
+. .+.|++|+++|....... +. .+.+..|+... +.+.+.+++.+ .+.++++|.
T Consensus 82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS 146 (253)
T PRK07904 82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSS 146 (253)
T ss_pred HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 22 378999999887532111 11 12466676544 44666666544 356666654
No 271
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.96 E-value=0.00015 Score=59.00 Aligned_cols=107 Identities=20% Similarity=0.191 Sum_probs=66.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEee-cC----CchhhhcCCCCEEEEc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYM-GN----DQLGQALEDSDVVIIP 103 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~-~~----~d~~~a~~~aD~Vi~~ 103 (209)
++++|+||+|.+|.+++..|+++|+ +|+++++++... .. . .+..+. +- ....+.+...|++|++
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~~-~----~~~~~~~D~~~~~~~~~~~~~~id~lv~~ 74 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----LS-G----NFHFLQLDLSDDLEPLFDWVPSVDILCNT 74 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----cC-C----cEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence 4899999999999999999999998 999999864211 00 0 111110 00 1122335678999999
Q ss_pred CCCCC--CC--CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 104 AGVPR--KP--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 104 ag~~~--~~--g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+|... .+ ..+ ....+..|+.....+.+.+... .+.+.++++|.
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 127 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS 127 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 98642 11 112 2335677877766666665432 23456766664
No 272
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.96 E-value=0.00015 Score=60.04 Aligned_cols=118 Identities=14% Similarity=0.163 Sum_probs=76.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCcceeEeecC-------CchhhhcCCCCE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGYMGN-------DQLGQALEDSDV 99 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~~v~~~~~~-------~d~~~a~~~aD~ 99 (209)
+-++|+|||+.+|..++..|.+.|+ +|++..|+. ++..+.++.+........++++. ..+.+.+...|+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 3578999999999999999999999 999999974 34455556631111111111111 123455678999
Q ss_pred EEEcCCCCCCCC------CChhHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecCCCC
Q 028437 100 VIIPAGVPRKPG------MTRDDLFNINAGIVKDLCSA----IAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 100 Vi~~ag~~~~~g------~~r~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~snP~~ 149 (209)
+|+.||...... .+...++..|++.+.+...+ |.+. ..+.||++|.-.+
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG 143 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAG 143 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccccc
Confidence 999999864311 13456788898776655544 4433 3557888875443
No 273
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.95 E-value=0.00019 Score=58.84 Aligned_cols=114 Identities=18% Similarity=0.207 Sum_probs=65.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEE-ecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhhc-------
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALY-DIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQAL------- 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~-D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a~------- 94 (209)
++++|+||+|++|..++..|++.|. +|++. +++..+ ....++..... .+..+ ....++++++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALGR--KALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999998 87664 554321 11222322111 11111 1111222333
Q ss_pred CCCCEEEEcCCCCCC-C--CCChh---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRK-P--GMTRD---DLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~-~--g~~r~---~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
...|+||+.+|.... + ..+.. ..+..|......+++++.++ .+.++++++|.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS 141 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS 141 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 357999999986421 1 11222 23456776666666666553 23457777764
No 274
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.95 E-value=0.00025 Score=59.06 Aligned_cols=116 Identities=17% Similarity=0.208 Sum_probs=65.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~ 95 (209)
++++|+||+|.+|.+++..|++.|+ +|++.++++.. ....++..... ++..+. ...+++++ +.
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELGI--EAHGYVCDVTDEDGVQAMVSQIEKEVG 86 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999998 99999886421 11222322111 111110 01112222 34
Q ss_pred CCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCC
Q 028437 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISNPV 148 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~snP~ 148 (209)
..|++|+++|..... ..+ ....+..|+.....+.+.+.++ ...+.++++|...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 148 (265)
T PRK07097 87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM 148 (265)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc
Confidence 579999999874311 112 2233456665544444443321 3456777777543
No 275
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.95 E-value=0.00021 Score=58.76 Aligned_cols=113 Identities=22% Similarity=0.308 Sum_probs=65.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhh-------cCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQA-------LED 96 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~~~ 96 (209)
+++|+|++|.+|..++..|++.|. +|++++++... ....++..... .+..+ ...++++++ +..
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQAGG--KAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999998 99999986421 11222322111 11111 111122222 345
Q ss_pred CCEEEEcCCCCCC-C--CCChh---HHHHHHHHHHH----HHHHHHHhhCCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRK-P--GMTRD---DLFNINAGIVK----DLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~-~--g~~r~---~~~~~N~~~~~----~i~~~i~~~~p~~~viv~sn 146 (209)
.|+||+++|.... + ..+.. ..+..|+.... .+.+.+++.+....++++|.
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 137 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAAS 137 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 7999999987431 1 22222 34566665444 44455554444466776653
No 276
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.94 E-value=0.00011 Score=58.57 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=63.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhh---hcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQ---ALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~---a~~~aD~Vi~~ag 105 (209)
|+++|+||+|.+|..++..|.++ . +|++.++++. ....|+.+. +++++ .+...|++|+++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~------------~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDP------------ASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCCh------------HHHHHHHHhcCCCCEEEECCC
Confidence 48999999999999999999988 5 9999988531 011122221 11222 2347899999998
Q ss_pred CCCCC---CCChh---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 106 VPRKP---GMTRD---DLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 106 ~~~~~---g~~r~---~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
..... ..+.. ..+..|+....++.+.+.++- +.+.++++|.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss 112 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSG 112 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcc
Confidence 64311 12222 335667776666776665442 3456666653
No 277
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00023 Score=58.67 Aligned_cols=113 Identities=16% Similarity=0.175 Sum_probs=65.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~~ 95 (209)
++++|+||+|.+|..++..|++.|. +|++.++++.. ....++.+... ++..+ ...++.+++ +.
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEGG--EAVALAGDVRDEAYAKALVALAVERFG 82 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999998 99999986421 12223332211 11111 111122222 23
Q ss_pred CCCEEEEcCCCCC--CC--CCC---hhHHHHHHHHHH----HHHHHHHHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPR--KP--GMT---RDDLFNINAGIV----KDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~--~~--g~~---r~~~~~~N~~~~----~~i~~~i~~~~p~~~viv~sn 146 (209)
..|++|++||... .+ ..+ ....+..|+... +.+.+.+.+. ..+.++++|.
T Consensus 83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS 143 (254)
T PRK07478 83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTST 143 (254)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 6899999998632 11 122 234467777544 4445555443 3456666654
No 278
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.92 E-value=8.2e-05 Score=61.68 Aligned_cols=113 Identities=23% Similarity=0.272 Sum_probs=66.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCCCCCcceeEee----cCCchhhh-------cCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRSEVAGYM----GNDQLGQA-------LED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~~ 96 (209)
++++|+||+|.+|+.++..|++.|. +|++++++.. .....++..... ++..+. ...+++++ +..
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGRGH--RCTAVVADVRDPASVAAAIKRAKEKEGR 82 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhCC--ceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999998 9999998642 111222221110 111111 01122222 335
Q ss_pred CCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEec
Q 028437 97 SDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMIS 145 (209)
Q Consensus 97 aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~s 145 (209)
.|+||+++|..... ..+ ..+.+..|+.....+.+.+.++ ...+.++++|
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is 140 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMS 140 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 79999999864211 111 2334667877777666665543 2334566664
No 279
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00016 Score=59.99 Aligned_cols=114 Identities=25% Similarity=0.266 Sum_probs=68.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhh------cC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQA------LE 95 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a------~~ 95 (209)
.++|+|+||+|++|..++..|+++|. +|+++++++.. ....++... ..+..+. ..++.++. +.
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPYP---GRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 35899999999999999999999998 99999997421 111222111 1111111 01111111 35
Q ss_pred CCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..|++|+++|...... .+ ..+.+..|+.....+.+.+.++ .+.+.++++|.
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 6799999998753211 11 2345667877777777666543 22355666654
No 280
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.92 E-value=0.00018 Score=63.77 Aligned_cols=60 Identities=20% Similarity=0.415 Sum_probs=47.6
Q ss_pred ccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEE
Q 028437 21 YSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVV 100 (209)
Q Consensus 21 ~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~V 100 (209)
|-..++.+++|+|+|+.|.+|..++..|.+.|+ +|.++|++.. ++.++++++||+|
T Consensus 91 ~~~~~~~~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlV 146 (374)
T PRK11199 91 FKTLNPDLRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMV 146 (374)
T ss_pred ccccCcccceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEE
Confidence 333445568999999669999999999999999 9999998420 1245678899999
Q ss_pred EEcC
Q 028437 101 IIPA 104 (209)
Q Consensus 101 i~~a 104 (209)
|+++
T Consensus 147 ilav 150 (374)
T PRK11199 147 IVSV 150 (374)
T ss_pred EEeC
Confidence 9995
No 281
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00023 Score=59.42 Aligned_cols=115 Identities=11% Similarity=0.170 Sum_probs=66.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhhc------CC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQAL------ED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a~------~~ 96 (209)
+.++|+||+|.+|..++..|++.|. +|++.++++.. ....++.... ..++.. +...++.++.+ ..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999999999999999999998 99999997421 1222232210 111111 11111232333 35
Q ss_pred CCEEEEcCCCCCCC---CCChh---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEecCC
Q 028437 97 SDVVIIPAGVPRKP---GMTRD---DLFNINA----GIVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 97 aD~Vi~~ag~~~~~---g~~r~---~~~~~N~----~~~~~i~~~i~~~~p~~~viv~snP 147 (209)
.|++|+++|..... ..+.. ..+..|+ ..++.+.+.+++. ..+.+|++|..
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~ 145 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSV 145 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCc
Confidence 79999999875321 12222 3344554 3456666666553 34567777543
No 282
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.91 E-value=0.00021 Score=64.59 Aligned_cols=66 Identities=24% Similarity=0.372 Sum_probs=47.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|||+|+||+|.+|..++..|...|+ +|.++|+++.... ++.... .+.. +.+.+++++++|+||+++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~~--~~a~~~---gv~~---~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKGK--EVAKEL---GVEY---ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHHH--HHHHHc---CCee---ccCHHHHhccCCEEEEec
Confidence 5899999669999999999999998 9999999753211 111110 0111 235677889999999986
No 283
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00016 Score=62.77 Aligned_cols=115 Identities=21% Similarity=0.154 Sum_probs=66.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcce--eEeecCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEV--AGYMGNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v--~~~~~~~d~~~a-------~~~a 97 (209)
++|+|+||+|.+|..++..|++.|. +|+++++++. .....++........+ .++...++.+++ +...
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999999999998 9999999752 1122233222111111 011111122222 2468
Q ss_pred CEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecC
Q 028437 98 DVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSA----IAKYCPNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~sn 146 (209)
|++|++||..... ..+ ..+.+..|+.....+.+. +.+. ..+.+|+++.
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS 143 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMIS 143 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence 9999999875321 112 223466676655554444 4433 3456666653
No 284
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00013 Score=60.58 Aligned_cols=74 Identities=15% Similarity=0.101 Sum_probs=53.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
|+|+|+||||++|++++..|+..|+ +|+..-+++...... . ........++.....+..+++|.|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~~--~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAAL--A-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHhh--c-CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 5899999999999999999999998 999998875322222 2 211112222333446778899999999987644
No 285
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.90 E-value=0.00016 Score=62.05 Aligned_cols=95 Identities=20% Similarity=0.204 Sum_probs=60.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~ 108 (209)
|||+|+|. |.+|.+++..|.+.|+ +|.++|+++.. ...+...... ......++.+.++++|+|+++...
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~~----~~~s~~~~~~~~~~~dvIi~~vp~-- 69 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRTT----GVANLRELSQRLSAPRVVWVMVPH-- 69 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCCc----ccCCHHHHHhhcCCCCEEEEEcCc--
Confidence 58999999 9999999999999999 99999997532 2223322111 010012334456789999998421
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCC
Q 028437 109 KPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPV 148 (209)
Q Consensus 109 ~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~ 148 (209)
..++++++.+.... ++..+|..||..
T Consensus 70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 12344444554443 556677777654
No 286
>PRK07985 oxidoreductase; Provisional
Probab=97.89 E-value=0.00058 Score=58.09 Aligned_cols=115 Identities=18% Similarity=0.139 Sum_probs=68.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh---HHHh-hcCCCCCcceeEee-cCCc---h-------hhh
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG---VAAD-VGHINTRSEVAGYM-GNDQ---L-------GQA 93 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~---~~~d-l~~~~~~~~v~~~~-~~~d---~-------~~a 93 (209)
++++|+||+|.+|.+++..|++.|. +|++.+++.... ...+ +..... .+..+. +.++ + .+.
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEECGR--KAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHcCC--eEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999998 999887643111 1111 111110 111110 0111 1 123
Q ss_pred cCCCCEEEEcCCCCCC--C--CCC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCC
Q 028437 94 LEDSDVVIIPAGVPRK--P--GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNP 147 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~--~--g~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP 147 (209)
+...|++|+.+|.... + ..+ ....+..|+.....+++.+.++- ..+.+|++|..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 4567999999986321 1 122 23456788887777777766542 34677777654
No 287
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.88 E-value=7.6e-05 Score=60.90 Aligned_cols=114 Identities=20% Similarity=0.242 Sum_probs=66.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch-h--HHHhhcCCCCCcceeEee----cCCchhhh-------c
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-G--VAADVGHINTRSEVAGYM----GNDQLGQA-------L 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~-~--~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~ 94 (209)
.+++|+|++|.+|++++..|+++|. +|++.+++... . ....+.... .++..+. ..++++++ +
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGNDCAKDWFEEYGFTE--DQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhhccC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3899999999999999999999998 99999987421 1 111111111 1111111 11122222 2
Q ss_pred CCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHH----HHHhhCCCeEEEEecCC
Q 028437 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCS----AIAKYCPNAIVNMISNP 147 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~----~i~~~~p~~~viv~snP 147 (209)
...|++|+++|..... ..+ ....+..|+.....+.+ .+++. +..+++++|..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~ 140 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV 140 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECCh
Confidence 3589999999865311 111 23345677776666544 44433 45577777654
No 288
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00032 Score=57.97 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=67.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcCCCCCcceeEe----ecCCchhhhc-------CC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHINTRSEVAGY----MGNDQLGQAL-------ED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~~~~~~~v~~~----~~~~d~~~a~-------~~ 96 (209)
.+|+|+||+|.+|..++..|++.|. ++++.++++... ...++..... .+..+ ...+++++++ ..
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQP--RAEFVQVDLTDDAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4899999999999999999999998 899998865321 1222322111 11111 1111233333 36
Q ss_pred CCEEEEcCCCCCCCCC-----ChhHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKPGM-----TRDDLFNINAGIVKDLCSAIAKYC--PNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g~-----~r~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~sn 146 (209)
.|+||+++|....... +..+.+..|+.....+.+.+.++. ....++++|.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (258)
T PRK08628 84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISS 140 (258)
T ss_pred CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECC
Confidence 7999999986432221 123456677776666666554432 2345666653
No 289
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.87 E-value=4.2e-05 Score=63.29 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=63.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCC--CCcceeEeec----CCchhhhcCCCCEEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHIN--TRSEVAGYMG----NDQLGQALEDSDVVII 102 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~--~~~~v~~~~~----~~d~~~a~~~aD~Vi~ 102 (209)
++|+|+||+|.+|+.++..|++.|. +|+++++++... ..... ...++..... .....+.+...|+||+
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGA--RVVTTARSRPDD----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCChhhh----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5899999999999999999999998 999999864211 11100 0001110000 0012233457899999
Q ss_pred cCCCCCCC-C----CC---hhHHHHHHHHHHHHH----HHHHHhhCCCeEEEEecC
Q 028437 103 PAGVPRKP-G----MT---RDDLFNINAGIVKDL----CSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 103 ~ag~~~~~-g----~~---r~~~~~~N~~~~~~i----~~~i~~~~p~~~viv~sn 146 (209)
++|....+ + .+ ....+..|+.....+ .+.+++.. .+.+|++|.
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS 138 (260)
T PRK06523 84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTS 138 (260)
T ss_pred CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence 99854211 1 11 233456676655444 45554432 356777664
No 290
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.0016 Score=53.24 Aligned_cols=116 Identities=20% Similarity=0.221 Sum_probs=65.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCC-Cc-cee-Eeec--CCchhh-------hc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINT-RS-EVA-GYMG--NDQLGQ-------AL 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~-~~-~v~-~~~~--~~d~~~-------a~ 94 (209)
++|+|+||+|++|.+++..|++.|. +|+++++++.. ....++..... .. .+. ++.. .+++++ .+
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 5899999999999999999999998 99999997521 11222221110 00 011 0100 011111 22
Q ss_pred -CCCCEEEEcCCCCC--CC--CCCh---hHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 95 -EDSDVVIIPAGVPR--KP--GMTR---DDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 95 -~~aD~Vi~~ag~~~--~~--g~~r---~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
...|.||+++|... .+ ..+. .+.+..|+.....+.+.+.+. .+.+.+++++.
T Consensus 85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss 147 (239)
T PRK08703 85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGE 147 (239)
T ss_pred CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 46799999998642 11 1122 234567776655555544432 23456666654
No 291
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.86 E-value=0.00014 Score=59.72 Aligned_cols=116 Identities=14% Similarity=0.094 Sum_probs=64.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCccee--EeecCCch-------hhhcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVA--GYMGNDQL-------GQALED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~--~~~~~~d~-------~~a~~~ 96 (209)
.+|+|+||+|++|++++..|+++|+ ++++..+... ......+.......... ++...+++ .+.+..
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999998 8777654321 11111222111000000 01111112 222346
Q ss_pred CCEEEEcCCCCCCCC---CCh---hHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKPG---MTR---DDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
.|+||+++|...... .+. .+.+..|+.....+++.+.++- ....++++|.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS 141 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence 899999998643211 122 2345667666666666655442 2356666654
No 292
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.86 E-value=8.4e-05 Score=60.36 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=31.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
++++|+||+|.+|+.++..|++.|. +|+++++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence 4799999999999999999999998 999999975
No 293
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00029 Score=58.14 Aligned_cols=113 Identities=21% Similarity=0.219 Sum_probs=65.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~~ 95 (209)
++++|+||+|.+|..++..|++.|. +|++.+++... ....++..... ++..+ ...++.+++ +.
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSGG--KVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcCC--eEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5799999999999999999999999 99999987421 12222322111 11111 111122222 34
Q ss_pred CCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHH----hhCCCeEEEEec
Q 028437 96 DSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIA----KYCPNAIVNMIS 145 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~----~~~p~~~viv~s 145 (209)
..|++|+++|..... ..+ ..+.+..|+.....+.+.+. +....+.++++|
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s 145 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA 145 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 789999999865321 112 22345667665555555543 322235566664
No 294
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.86 E-value=0.00013 Score=63.69 Aligned_cols=70 Identities=29% Similarity=0.423 Sum_probs=49.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
++|+|+||+|++|+.++..|...+-+.+++++++++... ...++... .+ .++++++.++|+||++++.
T Consensus 156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~----~i------~~l~~~l~~aDiVv~~ts~ 225 (340)
T PRK14982 156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGG----KI------LSLEEALPEADIVVWVASM 225 (340)
T ss_pred CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccc----cH------HhHHHHHccCCEEEECCcC
Confidence 489999999999999999998642234899999864211 11222211 11 2467889999999999987
Q ss_pred CC
Q 028437 107 PR 108 (209)
Q Consensus 107 ~~ 108 (209)
+.
T Consensus 226 ~~ 227 (340)
T PRK14982 226 PK 227 (340)
T ss_pred Cc
Confidence 64
No 295
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00014 Score=60.03 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=31.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
++|+|+||+|++|++++..|++.|. +|+++++++
T Consensus 10 k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~ 43 (258)
T PRK06949 10 KVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV 43 (258)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999999998 999999874
No 296
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=97.85 E-value=0.00024 Score=57.88 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=45.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCc---hhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQ---LGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d---~~~a~~~aD~Vi~~a 104 (209)
|+|+|+||+|.+|+.++..|++++....+.+.+++.... ....... .+. ++...++ +.+.+.+.|++|+++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~-~~~~Dls~~~~~~~~~~~~~~id~li~~a 75 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQHDNVQ-WHALDVTDEAEIKQLSEQFTQLDWLINCV 75 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----cccCceE-EEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence 589999999999999999999885422666666643211 1111000 000 0100111 233466889999999
Q ss_pred CCCC
Q 028437 105 GVPR 108 (209)
Q Consensus 105 g~~~ 108 (209)
|...
T Consensus 76 G~~~ 79 (235)
T PRK09009 76 GMLH 79 (235)
T ss_pred cccc
Confidence 9753
No 297
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.85 E-value=0.00012 Score=60.43 Aligned_cols=71 Identities=25% Similarity=0.462 Sum_probs=47.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHh-hcC-CCCCcceeEee-cCCchhhh-cCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAAD-VGH-INTRSEVAGYM-GNDQLGQA-LEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~d-l~~-~~~~~~v~~~~-~~~d~~~a-~~~aD~Vi~~a 104 (209)
|+|+|+|+ |.+|+++|..|.+.|+ +|+++|+++.. ..+ +.+ .... -+.... ..+-++++ +.++|+++.+.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~--~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEER--VEEFLADELDTH-VVIGDATDEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHH--HHHHhhhhcceE-EEEecCCCHHHHHhcCCCcCCEEEEee
Confidence 68999999 9999999999999999 99999998632 222 121 1111 111110 11124444 78899999986
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
|
T Consensus 75 ~ 75 (225)
T COG0569 75 G 75 (225)
T ss_pred C
Confidence 4
No 298
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00015 Score=59.73 Aligned_cols=116 Identities=15% Similarity=0.121 Sum_probs=66.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcc-eeE-eecCCchhhh-------cCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSE-VAG-YMGNDQLGQA-------LEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~-v~~-~~~~~d~~~a-------~~~a 97 (209)
++|+|+||+|++|.+++..|++.|. +|++++++.. .....++.+...... +.. +....+.+++ +...
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999998 9999998642 112222322111000 100 1011122222 3458
Q ss_pred CEEEEcCCCCC--CC--CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 98 DVVIIPAGVPR--KP--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 98 D~Vi~~ag~~~--~~--g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
|++|+++|... .+ ..+ ....+..|+.....+.+.+.++ .....++++|.
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 145 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS 145 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence 99999998532 11 122 2234667776666555555433 23356666654
No 299
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.84 E-value=0.00047 Score=58.50 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=61.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCc--cEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLV--SRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~--~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|+||+|+|+ |.+|..++..|.+.+.. .+|.+++++... ....+.... . .+.. +.+..++++++|+||++..
T Consensus 1 m~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~~-~-~~~~---~~~~~e~~~~aDvVilavp 73 (277)
T PRK06928 1 MEKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDKY-P-TVEL---ADNEAEIFTKCDHSFICVP 73 (277)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHHc-C-CeEE---eCCHHHHHhhCCEEEEecC
Confidence 468999999 99999999999988721 389999986421 112222111 0 1111 2355677889999999853
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCC
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVN 149 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~ 149 (209)
. ..+.++++.+..+- ++..+|.+.+-..
T Consensus 74 p----------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~ 102 (277)
T PRK06928 74 P----------------LAVLPLLKDCAPVLTPDRHVVSIAAGVS 102 (277)
T ss_pred H----------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 1 22345555555443 4556666666655
No 300
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00019 Score=59.19 Aligned_cols=114 Identities=11% Similarity=0.139 Sum_probs=67.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEee----cCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM----GNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~ 95 (209)
++++|+||+|.+|.+++..|++.|. .|++.+++.. .....++.... ..+..+. ..++.+++ +.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999998 9999998742 11222232211 1111111 11122222 24
Q ss_pred CCCEEEEcCCCCCC-C--CCCh---hHHHHHHHHHHHHHHHHHHh----hCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRK-P--GMTR---DDLFNINAGIVKDLCSAIAK----YCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~-~--g~~r---~~~~~~N~~~~~~i~~~i~~----~~p~~~viv~sn 146 (209)
..|++|+++|.... + ..+. ...+..|+.....+.+.+.+ ....+.++++|.
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 138 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA 138 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 67999999985321 1 1222 34567777666666666643 233467777764
No 301
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00013 Score=62.01 Aligned_cols=113 Identities=25% Similarity=0.271 Sum_probs=68.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhh-------hcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQ-------ALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~-------a~~ 95 (209)
++++|+||+|.+|..++..|++.|. +|++.++++.. ....++.... .+.. +...++.++ .+.
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 10 KVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGGDD---RVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCCC---cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999998 99999997421 1222332211 1111 111111222 235
Q ss_pred CCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHHHHhhC--CCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSAIAKYC--PNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~i~~~~--p~~~viv~sn 146 (209)
..|+||+++|..... ..+. .+.+..|+.....+++.+..+- ..+.++++|.
T Consensus 85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 689999999974311 1122 3346678777777666654431 2456777764
No 302
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.83 E-value=0.00014 Score=59.39 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=31.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
++++|+||+|.+|.+++..|++.|. +|++.++++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 36 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH 36 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence 4799999999999999999999999 999999875
No 303
>PRK09242 tropinone reductase; Provisional
Probab=97.83 E-value=0.00035 Score=57.74 Aligned_cols=116 Identities=14% Similarity=0.153 Sum_probs=67.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCc-------hhhhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQ-------LGQALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d-------~~~a~~ 95 (209)
++++|+||+|.+|..++..|++.|. +|++++++... ....++.......++..+. ..++ ..+.+.
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999998 99999987421 1122232210011111111 0111 123345
Q ss_pred CCCEEEEcCCCCCC-C--CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRK-P--GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~-~--g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..|+||+++|.... + ..+ ....+..|+.....+++.+.++ .+.+.++++|.
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS 147 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGS 147 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECc
Confidence 78999999986321 1 112 2234566777666665555432 33456777654
No 304
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.83 E-value=0.0003 Score=58.17 Aligned_cols=70 Identities=10% Similarity=0.202 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~--~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+.+||+|+|+ |.+|..++..++..+. ..++++++++.. ....++.+.. . +.. +.+.++.++++|+||++.
T Consensus 3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~-~--~~~---~~~~~~~~~~~DiViiav 74 (245)
T PRK07634 3 KKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY-N--VST---TTDWKQHVTSVDTIVLAM 74 (245)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc-C--cEE---eCChHHHHhcCCEEEEec
Confidence 4579999999 9999999999988763 334777876321 1122222211 1 111 235677889999999985
No 305
>PRK08017 oxidoreductase; Provisional
Probab=97.82 E-value=0.00014 Score=59.88 Aligned_cols=113 Identities=18% Similarity=0.141 Sum_probs=63.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhc--------CCCCEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL--------EDSDVV 100 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~--------~~aD~V 100 (209)
++|+|+||+|++|.+++..|++.|+ +|++++++.... .++.+.......-++...+++++++ ...|.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~i 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY--RVLAACRKPDDV--ARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGL 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHh--HHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEE
Confidence 3799999999999999999999998 999998864211 1111111110000011011111111 356899
Q ss_pred EEcCCCCCC-C--CCC---hhHHHHHHHHHHHH----HHHHHHhhCCCeEEEEecC
Q 028437 101 IIPAGVPRK-P--GMT---RDDLFNINAGIVKD----LCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 101 i~~ag~~~~-~--g~~---r~~~~~~N~~~~~~----i~~~i~~~~p~~~viv~sn 146 (209)
++.+|.... + ..+ ..+.+..|+..... +++.+.+.. ...++++|.
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss 133 (256)
T PRK08017 79 FNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSS 133 (256)
T ss_pred EECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcC
Confidence 999886431 1 112 22456677765544 455555443 345666664
No 306
>PRK12743 oxidoreductase; Provisional
Probab=97.81 E-value=0.0008 Score=55.67 Aligned_cols=114 Identities=18% Similarity=0.166 Sum_probs=66.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC-ch--hHHHhhcCCCCCcceeEe----ecCCchhhh-------c
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN-TP--GVAADVGHINTRSEVAGY----MGNDQLGQA-------L 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~-~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~ 94 (209)
.+++|+||+|.+|.+++..|++.|+ +|++.++.. .. ....++..... .+..+ ...++++++ +
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHGV--RAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3799999999999999999999998 888876532 11 11222222111 11111 111112222 2
Q ss_pred CCCCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh----CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~----~p~~~viv~sn 146 (209)
...|.+|+++|..... ..+ ..+.+..|+.....+.+.+.++ ...++++++|.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS 140 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS 140 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence 4579999999875321 112 2345667777666666655443 23467777764
No 307
>PRK05855 short chain dehydrogenase; Validated
Probab=97.81 E-value=0.00015 Score=66.56 Aligned_cols=117 Identities=18% Similarity=0.206 Sum_probs=68.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE--eecCCchhhh-------cCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG--YMGNDQLGQA-------LED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~--~~~~~d~~~a-------~~~ 96 (209)
.++++|+||+|++|.+++..|++.|. +|++.+++... ....++........... +...++.++. +..
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 36899999999999999999999999 99999997421 12222322111000000 1011112222 235
Q ss_pred CCEEEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSA----IAKYCPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~sn 146 (209)
.|++|++||..... ..+. ...+..|+....++.+. +.+....+.+|++|.
T Consensus 393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS 452 (582)
T PRK05855 393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS 452 (582)
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 79999999975321 1122 23456776655555544 444444567777764
No 308
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.81 E-value=0.00013 Score=60.53 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.++++|+||+|.+|.+++..|++.|+ +|+++++++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 40 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA 40 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35899999999999999999999999 999999974
No 309
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.80 E-value=0.001 Score=55.09 Aligned_cols=114 Identities=15% Similarity=0.206 Sum_probs=65.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeE----eecCCchhhh-------c
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAG----YMGNDQLGQA-------L 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~----~~~~~d~~~a-------~ 94 (209)
++++|+||+|.+|..++..|++.|. .+++..++.. .....++..... .+.. +...+++.+. +
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAGG--EAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcCC--eEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999998 8888777431 112222322111 1111 1111112222 3
Q ss_pred CCCCEEEEcCCCCCCC---CCCh---hHHHHHHHHHH----HHHHHHHHhhCCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKP---GMTR---DDLFNINAGIV----KDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~~~----~~i~~~i~~~~p~~~viv~sn 146 (209)
...|++|+.+|..... ..+. ...+..|+... +.+++.+.+....+.++++|.
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS 145 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSS 145 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 3579999999874321 1122 23456675443 445555555544567777754
No 310
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00028 Score=58.31 Aligned_cols=116 Identities=23% Similarity=0.300 Sum_probs=65.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCc-cee-EeecCCchhhh-------cCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRS-EVA-GYMGNDQLGQA-------LED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~-~v~-~~~~~~d~~~a-------~~~ 96 (209)
+.++|+|++|.+|.+++..|++.|+ +|++.+++.. .....++.+..... .+. ++...++++++ +..
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4899999999999999999999998 9999998642 11222333221110 011 01111122222 334
Q ss_pred CCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
.|++|+++|...... .+ ....+..|+.....+.+.+.+. ...+.++++|.
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK06114 87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIAS 145 (254)
T ss_pred CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECc
Confidence 699999998753211 12 2334566766665544443322 23456666643
No 311
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.80 E-value=0.0006 Score=56.33 Aligned_cols=117 Identities=16% Similarity=0.249 Sum_probs=68.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE--eecCCchhh-------hcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG--YMGNDQLGQ-------ALED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~--~~~~~d~~~-------a~~~ 96 (209)
.++|+|+||+|.+|.+++..|++.|. ++++.+++... ....++.+......... +...++.++ .+..
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999998 99999886421 11222322111100000 111112222 2346
Q ss_pred CCEEEEcCCCCCCC--CCChh---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP--GMTRD---DLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~--g~~r~---~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
.|++|+++|..... ..+.. +.+..|+.....+.+.+..+ ...+.++++|.
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 79999999864211 12222 33677887777777776532 23346666654
No 312
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00073 Score=55.78 Aligned_cols=114 Identities=14% Similarity=0.170 Sum_probs=65.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccE-EEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhh-------c
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSR-LALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQA-------L 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~e-v~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a-------~ 94 (209)
++|+|+||+|.+|..++..|++.|. + |+++++++.. ....++.... ..+.. +...++++++ +
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEALG--AKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999998 7 9999986421 1122232211 11111 1111112222 2
Q ss_pred CCCCEEEEcCCCCCCCC---CCh---hHHHHHHHHHHHHHHHHH----HhhCCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG---MTR---DDLFNINAGIVKDLCSAI----AKYCPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~~~~~i~~~i----~~~~p~~~viv~sn 146 (209)
.+.|++|+++|...... .+. ...+..|+.....+.+.+ .+....+.++++|.
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss 144 (260)
T PRK06198 83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS 144 (260)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 46899999998753211 122 234566776655555444 33322355666654
No 313
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.79 E-value=0.00027 Score=59.25 Aligned_cols=66 Identities=20% Similarity=0.274 Sum_probs=46.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEE-ecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPL--VSRLALY-DIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~--~~ev~l~-D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|||+++|. |.+|..++..|++.|+ ..+|+++ |+++.. ...+.... +.. ..+..++++++|+||++.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~g----~~~---~~~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSLG----VKT---AASNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHcC----CEE---eCChHHHHhcCCEEEEEE
Confidence 68999998 9999999999999886 3478888 775422 22232221 111 134567788999999996
No 314
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.79 E-value=0.00022 Score=60.49 Aligned_cols=65 Identities=22% Similarity=0.254 Sum_probs=45.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|||+|+|. |.+|..++..|.+.|+ +|.++|+++.. ...+..... +.. .+++. +++++||+||++.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~--~~~a~~~g~---~~~--~~~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRREST--CERAIERGL---VDE--ASTDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHCCC---ccc--ccCCH-hHhcCCCEEEEcC
Confidence 58999998 9999999999999998 99999997521 111111110 000 12233 5688999999995
No 315
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.79 E-value=0.00027 Score=57.95 Aligned_cols=114 Identities=16% Similarity=0.153 Sum_probs=62.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEec-CCc--hhHHHhhcCCCCCcceeEe----ecCCchhhh-------c
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI-ANT--PGVAADVGHINTRSEVAGY----MGNDQLGQA-------L 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~-~~~--~~~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~ 94 (209)
++|+|+||+|++|+.++..|++.|. +|++.+. ++. .....++..... ++..+ ...++++++ +
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW--SVGINYARDAAAAEETADAVRAAGG--RACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4899999999999999999999998 8877654 321 112222322111 11111 111122222 3
Q ss_pred CCCCEEEEcCCCCCCC----CCCh---hHHHHHHHHHHHHHHHHHHhh----C--CCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKP----GMTR---DDLFNINAGIVKDLCSAIAKY----C--PNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~----g~~r---~~~~~~N~~~~~~i~~~i~~~----~--p~~~viv~sn 146 (209)
...|++|+++|..... ..+. ...+..|+.....+++++.+. . +.+.+|++|.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS 143 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSS 143 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 4689999999864211 1122 234566766655554433322 1 1356777664
No 316
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.79 E-value=0.00036 Score=58.37 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=31.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
++++|+||+|.+|++++..|++.|. +|++++++.
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~ 44 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQ 44 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5799999999999999999999999 999999964
No 317
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.78 E-value=0.00024 Score=59.54 Aligned_cols=96 Identities=15% Similarity=0.232 Sum_probs=59.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
||||+|+|+ |.+|..++..|.+.+. ..+|.++|+++.. ...+.+.. . +.. +.+.++.++++|+||++...
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~~-g--~~~---~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEEY-G--VRA---ATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHhc-C--Cee---cCChHHHHhcCCEEEEEcCH
Confidence 579999999 9999999999998872 1289999997522 12222210 0 111 23456678899999998521
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
..++++++.+..+. +..++.++|...
T Consensus 73 ----------------~~~~~v~~~l~~~~-~~~vvs~~~gi~ 98 (267)
T PRK11880 73 ----------------QVMEEVLSELKGQL-DKLVVSIAAGVT 98 (267)
T ss_pred ----------------HHHHHHHHHHHhhc-CCEEEEecCCCC
Confidence 12344445554433 345666666554
No 318
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.78 E-value=0.00021 Score=60.90 Aligned_cols=65 Identities=23% Similarity=0.301 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+|||+|+|. |.+|..++..|.+.|+ +|.++|+++.. ...+.... ... .+++++++++||+||++.
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~--~~~~~~~g----~~~---~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEA--VAEVIAAG----AET---ASTAKAVAEQCDVIITML 66 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 368999999 9999999999999998 99999997532 12222211 111 235677889999999995
No 319
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00044 Score=56.61 Aligned_cols=116 Identities=17% Similarity=0.153 Sum_probs=65.5
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcce-e-EeecCCchhhhc-------CCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEV-A-GYMGNDQLGQAL-------EDS 97 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v-~-~~~~~~d~~~a~-------~~a 97 (209)
.++|+||+|++|++++..|++.|. +|++.+++.. .....++......... . ++...+++++++ ...
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 699999999999999999999998 7887765321 1111223221111001 1 011112233333 367
Q ss_pred CEEEEcCCCCCCC----CCC---hhHHHHHHHHHHHHHHHHHHhhC------CCeEEEEecCC
Q 028437 98 DVVIIPAGVPRKP----GMT---RDDLFNINAGIVKDLCSAIAKYC------PNAIVNMISNP 147 (209)
Q Consensus 98 D~Vi~~ag~~~~~----g~~---r~~~~~~N~~~~~~i~~~i~~~~------p~~~viv~snP 147 (209)
|+||+++|..... ..+ ..+.+..|+.....+.+.+.+.- ..+.++++|..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~ 144 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM 144 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECch
Confidence 9999999875321 112 22456778877666655554331 13567776654
No 320
>PRK06484 short chain dehydrogenase; Validated
Probab=97.77 E-value=0.00047 Score=63.02 Aligned_cols=117 Identities=21% Similarity=0.261 Sum_probs=71.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCccee-EeecCCchhhh-------cCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVA-GYMGNDQLGQA-------LEDS 97 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~-~~~~~~d~~~a-------~~~a 97 (209)
.++++|+||+|.+|..++..|+++|. +|++.++++... ...++.... . .+. ++...++.++. +...
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGDEH-L-SVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCce-e-EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999999999999999999998 999999974211 111221110 0 010 01111122222 2457
Q ss_pred CEEEEcCCCCCC--C--CCC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCC
Q 028437 98 DVVIIPAGVPRK--P--GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPV 148 (209)
Q Consensus 98 D~Vi~~ag~~~~--~--g~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~ 148 (209)
|++|++||.... + ..+ ....+..|+.....+.+.+..+- ..+.++++|...
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 999999997521 1 122 23456778877777776665543 346788887543
No 321
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.75 E-value=0.00027 Score=57.81 Aligned_cols=34 Identities=26% Similarity=0.528 Sum_probs=31.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.+++|+|++|.+|..++..|+++|. +|+++++++
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~ 39 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ 39 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999999998 899999875
No 322
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.74 E-value=0.0002 Score=60.96 Aligned_cols=64 Identities=22% Similarity=0.333 Sum_probs=47.6
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
||+|+|. |.+|..++..|+..|+ +|+++|+++. ....+..... .. .++.++++++||+||++..
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~--~~~~~~~~g~----~~---~~~~~~~~~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPE--VADELLAAGA----VT---AETARQVTEQADVIFTMVP 64 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHH--HHHHHHHCCC----cc---cCCHHHHHhcCCEEEEecC
Confidence 5999999 9999999999999999 9999999752 2222332221 00 2356788999999999953
No 323
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.0006 Score=57.17 Aligned_cols=114 Identities=17% Similarity=0.167 Sum_probs=65.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEee----cCCchhhh-------cC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYM----GNDQLGQA-------LE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~ 95 (209)
+.++|+||+|++|.+++..|+++|. +|++.+++... ....++.... ..+..+. ..++++++ +.
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRVEKCEELVDKIRADG--GEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999998 99999885421 1111122111 0111111 11122222 34
Q ss_pred CCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
..|.+|+++|...... .+ ..+.+..|+.....+.+.+.+. ...+.++++|.
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS 146 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGS 146 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECC
Confidence 6799999998653211 12 2234567777666666665432 22345666654
No 324
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.73 E-value=0.00035 Score=62.90 Aligned_cols=116 Identities=20% Similarity=0.259 Sum_probs=70.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcC-CCCCccee-EeecCCchhhh-------cCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGH-INTRSEVA-GYMGNDQLGQA-------LEDSD 98 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~-~~~~~~v~-~~~~~~d~~~a-------~~~aD 98 (209)
.++++|+||+|.+|..++..|++.|. +|+++|+........++.. .... .+. ++...++.++. +...|
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGT-ALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCe-EEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 35899999999999999999999998 9999988532211112111 1100 011 11111112221 23689
Q ss_pred EEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 99 VVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+||+++|..... ..+ ....+..|+.....+.+.+.+. .+.++++++|.
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 999999975421 112 2345678888888888887652 24467777763
No 325
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.73 E-value=0.00031 Score=59.93 Aligned_cols=66 Identities=21% Similarity=0.267 Sum_probs=50.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
+||++||- |.+|+.++..|++.|+ +++++|+++.+. ...+...... . ..+..++.+++|+||.+..
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~Ga~----~---a~s~~eaa~~aDvVitmv~ 66 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAGAT----V---AASPAEAAAEADVVITMLP 66 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcCCc----c---cCCHHHHHHhCCEEEEecC
Confidence 58999998 9999999999999999 999999986432 2233332211 1 1345789999999999854
No 326
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.72 E-value=0.00049 Score=56.34 Aligned_cols=116 Identities=17% Similarity=0.137 Sum_probs=63.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEec-CCc--hhHHHhhcCCCCCcceeE--eecCCchhhh-------cCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI-ANT--PGVAADVGHINTRSEVAG--YMGNDQLGQA-------LED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~-~~~--~~~~~dl~~~~~~~~v~~--~~~~~d~~~a-------~~~ 96 (209)
+.++|+|++|++|..++..|++.|. ++++... +.. .....++........... +...++++++ +..
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999998 8877543 221 111222222111100000 1111122222 346
Q ss_pred CCEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
.|+||+++|..... ..+ ....+..|+.....+.+.+.+. .+..+++++|.
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS 140 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS 140 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence 89999999875321 112 2344667776644444444332 23356777664
No 327
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.72 E-value=0.00023 Score=57.93 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=31.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.+|+|+||+|++|+.++..|++.|. +|++.++++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~ 39 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE 39 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4899999999999999999999999 999999965
No 328
>PRK07680 late competence protein ComER; Validated
Probab=97.72 E-value=0.00032 Score=59.20 Aligned_cols=97 Identities=15% Similarity=0.214 Sum_probs=62.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~--~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
|||+|+|+ |.+|..++..|.+.|+ ..+|.++|+++.. ...+.+.. . .+.. ..+.+++++++|+||++.-
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~--~~~~~~~~-~-g~~~---~~~~~~~~~~aDiVilav~- 71 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAK--AYHIKERY-P-GIHV---AKTIEEVISQSDLIFICVK- 71 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHH--HHHHHHHc-C-CeEE---ECCHHHHHHhCCEEEEecC-
Confidence 58999998 9999999999998884 2479999997522 12222210 0 1121 2345677889999999961
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCC
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVN 149 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~ 149 (209)
+ ..+.++++.+..+- ++..++-++++..
T Consensus 72 p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 72 P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 1 11244445554443 4567778888765
No 329
>PRK08324 short chain dehydrogenase; Validated
Probab=97.72 E-value=0.00045 Score=65.69 Aligned_cols=113 Identities=21% Similarity=0.264 Sum_probs=67.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhhc-------C
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQAL-------E 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a~-------~ 95 (209)
++|+|+||+|++|..++..|++.|. +|+++|++... ....++.... .+.. +...+++++++ .
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~~---~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGPD---RALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhccC---cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999998 99999997521 1122232210 1111 11111222223 3
Q ss_pred CCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHH----hhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIA----KYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~----~~~p~~~viv~sn 146 (209)
+.|+||+++|...... .+ ....+..|+.....+++.+. +....+.++++|.
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS 558 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIAS 558 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 7899999998653211 12 22345667766666655443 3322356776654
No 330
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=97.71 E-value=0.00064 Score=55.41 Aligned_cols=114 Identities=13% Similarity=0.139 Sum_probs=65.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeEee----cCCchhhh-------cCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM----GNDQLGQA-------LED 96 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~~~ 96 (209)
|+|+||+|++|.+++..|+++|. +|+++++... .....++.+... ++..+. ..++.+++ +..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQGG--NARLLQFDVADRVACRTLLEADIAEHGA 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcCC--eEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999998 8888876431 111222322211 111111 11122222 235
Q ss_pred CCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHH----hhCCCeEEEEecCCC
Q 028437 97 SDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIA----KYCPNAIVNMISNPV 148 (209)
Q Consensus 97 aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~----~~~p~~~viv~snP~ 148 (209)
.|.+|+++|...... .+ ....+..|+.....+.+.+. +..+.+.++++|...
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS 138 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence 699999998653221 12 33456778777766665431 223456777776543
No 331
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.70 E-value=0.00034 Score=61.54 Aligned_cols=68 Identities=21% Similarity=0.265 Sum_probs=47.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
++|+|+|. |.+|..++..|...|+ ++.++++++.......-...... .. .++++++++++||+||+++
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~~~~---~~--~~~~~~~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGFGVI---DE--LAADLQRAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcCCCC---cc--cccCHHHHhcCCCEEEEeC
Confidence 37999999 9999999999999998 88889887532221111111110 00 1235678889999999995
No 332
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.69 E-value=0.00031 Score=65.89 Aligned_cols=140 Identities=12% Similarity=0.110 Sum_probs=84.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchh-hhcCCCCEEEEcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLG-QALEDSDVVIIPAGV 106 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~-~a~~~aD~Vi~~ag~ 106 (209)
.++|.|+|. |.+|+.++..|.+.|+ +++++|.|+. ....+.+...+.-..+.+..+-++ .-+++||.+|.+.+.
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~--~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDIS--AVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHH--HHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC
Confidence 368999999 9999999999999999 9999999863 222333332211111111111122 236789999998421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEe-cCCCCCcHHHHHHHHHHhCCCCCCcEEEEehhhHHHHHHHH
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI-SNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKTFY 185 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~-snP~~~~~~i~~~~~~~~~~~p~~~vig~~~lds~r~~~~l 185 (209)
-+.| ..++..+++.+|+.+++.- .|+.+ .+.+++.+ .+.++--+...+.++-...
T Consensus 475 -----------~~~n----~~i~~~~r~~~p~~~IiaRa~~~~~------~~~L~~~G---a~~vv~e~~es~l~l~~~~ 530 (601)
T PRK03659 475 -----------PEDT----MKIVELCQQHFPHLHILARARGRVE------AHELLQAG---VTQFSRETFSSALELGRKT 530 (601)
T ss_pred -----------HHHH----HHHHHHHHHHCCCCeEEEEeCCHHH------HHHHHhCC---CCEEEccHHHHHHHHHHHH
Confidence 1334 3466667788898766544 45433 34455543 4444433444445555566
Q ss_pred HHHcCCCCCCe
Q 028437 186 AGKANVNVAGL 196 (209)
Q Consensus 186 a~~l~v~~~~v 196 (209)
-..+|++++++
T Consensus 531 L~~lg~~~~~~ 541 (601)
T PRK03659 531 LVSLGMHPHQA 541 (601)
T ss_pred HHHcCCCHHHH
Confidence 67777777654
No 333
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.69 E-value=0.00066 Score=58.08 Aligned_cols=101 Identities=20% Similarity=0.241 Sum_probs=60.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeEee----cCCchhhh------c
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYM----GNDQLGQA------L 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~~~----~~~d~~~a------~ 94 (209)
.++++|+||+|.+|..++..|++.|. +|++.|+... .....++.... ..+..+. ..++.++. +
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAAG--AKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 35899999999999999999999998 9999987431 12223333211 1111111 01112222 3
Q ss_pred CCCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHH
Q 028437 95 EDSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAI 132 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i 132 (209)
...|++|++||...... .+ ....+..|+.....+.+.+
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~ 131 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNA 131 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 46899999999764321 22 2335667777666666554
No 334
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.68 E-value=0.0008 Score=57.64 Aligned_cols=64 Identities=14% Similarity=0.330 Sum_probs=45.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCC---CCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALED---SDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~---aD~Vi~~a 104 (209)
|||+++|. |.+|++++..|.+.|+ +|+++|+++.. ...+.+.. ... ..+.++.+++ +|+|+++.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEA--VDVAGKLG----ITA---RHSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence 58999999 9999999999999998 99999997532 22232221 111 2345566555 68999985
No 335
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.68 E-value=0.0033 Score=52.38 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=28.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
.++|+||+|.+|.+++..|+++|. +|++.+++
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~ 34 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR 34 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence 689999999999999999999998 89887653
No 336
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.68 E-value=0.00077 Score=54.79 Aligned_cols=115 Identities=19% Similarity=0.196 Sum_probs=63.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEec-CCch--hHHHhhcCCCCCcceeE--eecCCch-------hhhcCCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI-ANTP--GVAADVGHINTRSEVAG--YMGNDQL-------GQALEDS 97 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~-~~~~--~~~~dl~~~~~~~~v~~--~~~~~d~-------~~a~~~a 97 (209)
.++|+||+|.+|..++..|++.|+ ++++..+ ++.. ....++........+.. +....++ .+.+...
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999998 8888877 3211 11112211110101111 1001112 2224568
Q ss_pred CEEEEcCCCCCCC---CCC---hhHHHHHHHHHHHHH----HHHHHhhCCCeEEEEecCC
Q 028437 98 DVVIIPAGVPRKP---GMT---RDDLFNINAGIVKDL----CSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 98 D~Vi~~ag~~~~~---g~~---r~~~~~~N~~~~~~i----~~~i~~~~p~~~viv~snP 147 (209)
|.||+++|..... ..+ ..+.+..|+.....+ .+.+++. +...++++|..
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~ 138 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSV 138 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch
Confidence 9999999865311 111 233456677655544 4444433 34567777643
No 337
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00042 Score=58.32 Aligned_cols=112 Identities=17% Similarity=0.204 Sum_probs=65.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcc-ee-EeecCCchhhhc------CCCCE
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSE-VA-GYMGNDQLGQAL------EDSDV 99 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~-v~-~~~~~~d~~~a~------~~aD~ 99 (209)
.++|+|| |.+|.+++..|. .|. +|++.|+++.. ....++........ +. ++...++.++++ ...|+
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 5678887 899999999996 787 99999997421 12223322111100 11 111111222222 45899
Q ss_pred EEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 100 VIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 100 Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
+|++||... ...+..+.+..|+.....+++.+.+.- +.+.+++++.
T Consensus 80 li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS 126 (275)
T PRK06940 80 LVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS 126 (275)
T ss_pred EEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence 999999753 223455678889888777777766542 2334455543
No 338
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.67 E-value=0.00026 Score=64.49 Aligned_cols=98 Identities=15% Similarity=0.202 Sum_probs=61.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC--CcceeEeecCCchhhhcC---CCCEEEE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT--RSEVAGYMGNDQLGQALE---DSDVVII 102 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~--~~~v~~~~~~~d~~~a~~---~aD~Vi~ 102 (209)
+.+|+|+|. |.+|.+++..|+..|+ +|.++|+++.. ..++..... ...+.. ..+++++++ ++|+|++
T Consensus 1 ~~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil 72 (470)
T PTZ00142 1 MSDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVIL 72 (470)
T ss_pred CCEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEE
Confidence 358999999 9999999999999999 99999997532 222222100 001222 245666665 5898888
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCC
Q 028437 103 PAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPV 148 (209)
Q Consensus 103 ~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~-~p~~~viv~snP~ 148 (209)
++-.+ +.++++++.+..+ .++.++|-.||-.
T Consensus 73 ~v~~~---------------~~v~~vi~~l~~~L~~g~iIID~gn~~ 104 (470)
T PTZ00142 73 LIKAG---------------EAVDETIDNLLPLLEKGDIIIDGGNEW 104 (470)
T ss_pred EeCCh---------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 84221 2334444444443 3566777777643
No 339
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.67 E-value=0.00015 Score=64.32 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=46.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC-CcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-RSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~-~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.+++||+|+||||++|..++..|..+... +|.++.++...++.....+... ......+. ..+ .+.++++|+||++.
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~-~~~~~~~DvVf~Al 112 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVK-DADFSDVDAVFCCL 112 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhhCccccCcccccee-cCC-HHHhcCCCEEEEcC
Confidence 46679999999999999999999888432 8888877532222111111100 00111110 112 23368999999986
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
+
T Consensus 113 p 113 (381)
T PLN02968 113 P 113 (381)
T ss_pred C
Confidence 5
No 340
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.66 E-value=0.00061 Score=58.49 Aligned_cols=69 Identities=22% Similarity=0.257 Sum_probs=47.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
+||+|+|+ |.+|..++..|.+.|+..+|.++|+++... ..+...... ... ..+.++++++||+||+++.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~--~~a~~~g~~--~~~---~~~~~~~~~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETR--ARARELGLG--DRV---TTSAAEAVKGADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHH--HHHHhCCCC--cee---cCCHHHHhcCCCEEEECCC
Confidence 69999998 999999999999888544899999975211 111111110 011 1245677899999999964
No 341
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.0025 Score=52.85 Aligned_cols=115 Identities=14% Similarity=0.170 Sum_probs=64.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEe----ecCCchh-------hhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGY----MGNDQLG-------QALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~----~~~~d~~-------~a~~ 95 (209)
+.++|+||+|.+|..++..|++.|. +|++.++++. .....++.......++..+ ...++.+ +.+.
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999999 9999999752 1122223221101111111 1111121 1234
Q ss_pred CCCEEEEcCCCCCCC---CCCh---hHHHHHHHH----HHHHHHHHHHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKP---GMTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~---g~~r---~~~~~~N~~----~~~~i~~~i~~~~p~~~viv~sn 146 (209)
..|++|++||..... ..+. ...+..|+. .++.+.+.+++. ..+.++++|.
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS 146 (265)
T PRK07062 87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNS 146 (265)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecc
Confidence 679999999875321 1121 223344433 445555555543 3456777654
No 342
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.65 E-value=0.00056 Score=65.06 Aligned_cols=116 Identities=20% Similarity=0.225 Sum_probs=65.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhhc-------C
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQAL-------E 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a~-------~ 95 (209)
++++|+||+|++|.+++..|++.|. +|+++|++... ....++........+.. +....+.++++ .
T Consensus 415 kvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999998 99999997421 11122221100001111 11111233333 3
Q ss_pred CCCEEEEcCCCCCCCC---CCh---hHHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPG---MTR---DDLFNINAGI----VKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~~----~~~i~~~i~~~~p~~~viv~sn 146 (209)
+.|++|++||...... .+. ...+..|+.. .+.+++.+++....+.++++|.
T Consensus 493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS 553 (676)
T TIGR02632 493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIAS 553 (676)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 6899999999753211 121 1223444443 3455555555443455666654
No 343
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.65 E-value=0.00016 Score=61.89 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=47.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+||+|+|. |.+|..++..|++.|+ +|.++|+++.. ..++..... .. ..+..+++++||+||++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g~----~~---~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKGA----TP---AASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcCC----cc---cCCHHHHHhcCCEEEEec
Confidence 48999999 9999999999999999 99999997532 222332211 11 235567889999999985
No 344
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00065 Score=63.84 Aligned_cols=115 Identities=14% Similarity=0.123 Sum_probs=67.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhhc-------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQAL------- 94 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a~------- 94 (209)
.++++|+||+|.+|.+++..|++.|. +|+++++++.. ....++..... ++.. +...++.++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKGG--TAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999998 99999997421 11222322111 1111 11112233333
Q ss_pred CCCCEEEEcCCCCCCCC--------CChhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRKPG--------MTRDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g--------~~r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
...|++|++||...... .+....+..|+.....+.+.+.+. ...+.++++|.
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS 509 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSS 509 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 36899999998642111 112334667776655554444322 23456777764
No 345
>PLN02256 arogenate dehydrogenase
Probab=97.64 E-value=0.0011 Score=57.01 Aligned_cols=65 Identities=20% Similarity=0.219 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhc-CCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL-EDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~-~~aD~Vi~~a 104 (209)
++|||+|+|. |.+|+.++..|.+.|+ +|+.+|++.....+.++ .. .. .++.++.+ .++|+||+++
T Consensus 35 ~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~---gv----~~---~~~~~e~~~~~aDvVilav 100 (304)
T PLN02256 35 RKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL---GV----SF---FRDPDDFCEEHPDVVLLCT 100 (304)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc---CC----ee---eCCHHHHhhCCCCEEEEec
Confidence 3479999998 9999999999998887 99999987522112211 11 11 13455555 4799999985
No 346
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.64 E-value=0.00016 Score=63.21 Aligned_cols=73 Identities=19% Similarity=0.318 Sum_probs=46.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.+|+||+|+||||++|..++..|.++++ ..++..+......++...+.. ....+.. . +. +.++++|+||++.
T Consensus 2 ~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~--~~l~~~~---~-~~-~~~~~vD~vFla~ 74 (336)
T PRK05671 2 SQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG--KNLRVRE---V-DS-FDFSQVQLAFFAA 74 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC--cceEEee---C-Ch-HHhcCCCEEEEcC
Confidence 3458999999999999999999997665 346667755432232222222 1112221 1 22 3368999999986
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
+
T Consensus 75 p 75 (336)
T PRK05671 75 G 75 (336)
T ss_pred C
Confidence 4
No 347
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.63 E-value=0.00068 Score=54.94 Aligned_cols=33 Identities=30% Similarity=0.545 Sum_probs=30.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
.||+|+|+ |.+|+.++..|++.|. ++++++|.+
T Consensus 22 ~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D 54 (200)
T TIGR02354 22 ATVAICGL-GGLGSNVAINLARAGI-GKLILVDFD 54 (200)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 48999999 9999999999999997 589999998
No 348
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.63 E-value=0.006 Score=50.57 Aligned_cols=32 Identities=16% Similarity=0.337 Sum_probs=29.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEec
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI 62 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~ 62 (209)
++++|+||++.+|.+++..|++.|. +|++.++
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~ 40 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYN 40 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcC
Confidence 5899999999999999999999998 8888765
No 349
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.62 E-value=0.00067 Score=55.33 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=61.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEE-ecCCc--hhHHHhhcCCCCCcc-eeE-eecCCchhhh-------cCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALY-DIANT--PGVAADVGHINTRSE-VAG-YMGNDQLGQA-------LED 96 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~-D~~~~--~~~~~dl~~~~~~~~-v~~-~~~~~d~~~a-------~~~ 96 (209)
..++|+||+|++|+.++..|++.|+ +|.+. ++++. .....++........ +.. +...++++++ ...
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY--TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 3689999999999999999999998 88764 44331 111222222110000 000 1111122333 335
Q ss_pred CCEEEEcCCCCCCC----CCC---hhHHHHHHHHHHHHHHHHHHh----h--CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP----GMT---RDDLFNINAGIVKDLCSAIAK----Y--CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~----g~~---r~~~~~~N~~~~~~i~~~i~~----~--~p~~~viv~sn 146 (209)
.|+||+++|..... ..+ ....+..|+.....+++.+.+ . +..+.++++|.
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS 142 (247)
T PRK09730 80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSS 142 (247)
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 68999999864211 111 223456676665544443332 2 12345666654
No 350
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.61 E-value=0.00088 Score=56.75 Aligned_cols=68 Identities=15% Similarity=0.276 Sum_probs=46.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~--~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|||+++|+ |.+|.+++..|++.|. ..+|+++|+++. ....++.... . +.. +.+..+++++||+||++.
T Consensus 4 mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~-g--~~~---~~~~~e~~~~aDvVilav 73 (279)
T PRK07679 4 QNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY-G--VKG---THNKKELLTDANILFLAM 73 (279)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc-C--ceE---eCCHHHHHhcCCEEEEEe
Confidence 69999998 9999999999998871 238999988542 1122222211 1 111 234567788999999996
No 351
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.60 E-value=0.00097 Score=58.12 Aligned_cols=63 Identities=24% Similarity=0.387 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
-..++|+|+|. |.+|+.++..|...|. +|+.+|+++.. ..+. ... ..++++++++||+|+++.
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~--~~~~--------~~~---~~~l~ell~~aDiVil~l 206 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNK--DLDF--------LTY---KDSVKEAIKDADIISLHV 206 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhH--hhhh--------hhc---cCCHHHHHhcCCEEEEeC
Confidence 34469999999 9999999999999998 99999986421 1111 011 235788999999999985
No 352
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00032 Score=56.85 Aligned_cols=108 Identities=17% Similarity=0.196 Sum_probs=64.8
Q ss_pred EEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeE----eecCCchhhhcC---CCCEEEE
Q 028437 32 AVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAG----YMGNDQLGQALE---DSDVVII 102 (209)
Q Consensus 32 ~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~----~~~~~d~~~a~~---~aD~Vi~ 102 (209)
+|+||+|++|..++..|++.|. +|+++++++.. ....++.... .+.. +...++++++++ ..|++|+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGGGA---PVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcCC---ceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 4899999999999999999998 99999997421 1122222111 1111 111123344443 4799999
Q ss_pred cCCCCCCC---CC---ChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 103 PAGVPRKP---GM---TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 103 ~ag~~~~~---g~---~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
.+|..... .. +..+.+..|+.....+.+.. ...+.+.++++|
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~~~~~g~iv~~s 123 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA-RIAPGGSLTFVS 123 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhh-hhcCCeEEEEEC
Confidence 99864321 11 13345677877777777733 233445666665
No 353
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.58 E-value=0.00021 Score=61.79 Aligned_cols=111 Identities=14% Similarity=0.200 Sum_probs=69.3
Q ss_pred hHHHHHHHHHhCCCccEEEEEecCCch----------hH--HH----hhcCCC-C--------CcceeEeecCCchhhhc
Q 028437 40 IGQPLALLMKLNPLVSRLALYDIANTP----------GV--AA----DVGHIN-T--------RSEVAGYMGNDQLGQAL 94 (209)
Q Consensus 40 vG~~la~~L~~~g~~~ev~l~D~~~~~----------~~--~~----dl~~~~-~--------~~~v~~~~~~~d~~~a~ 94 (209)
+|..++..++..|+ +|+++|.++.. +. .. .+.... . ..+++... +.+.++++
T Consensus 1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~~a~ 77 (314)
T PRK08269 1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVA-RDGAADAL 77 (314)
T ss_pred CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeec-CcchHHHh
Confidence 47889999999999 99999997621 10 00 011110 0 12333321 12356889
Q ss_pred CCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE
Q 028437 95 EDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCP-NAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p-~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~ 173 (209)
++||+||.++ .++.+..+.+...+.+.++ ++++ +||.+... ++++..... .|+|++|+
T Consensus 78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~---~~~la~~~~--~p~r~~g~ 136 (314)
T PRK08269 78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFL---VTDLQRHVA--HPERFLNA 136 (314)
T ss_pred ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCC---HHHHHhhcC--CcccEEEE
Confidence 9999999994 4566778888888988874 5443 88887753 333433332 35677776
Q ss_pred e
Q 028437 174 T 174 (209)
Q Consensus 174 ~ 174 (209)
+
T Consensus 137 H 137 (314)
T PRK08269 137 H 137 (314)
T ss_pred e
Confidence 4
No 354
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.57 E-value=0.0016 Score=48.57 Aligned_cols=70 Identities=27% Similarity=0.366 Sum_probs=43.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHh-CCCccEE-EEEecCCc--hh-HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEc
Q 028437 29 RKVAVLGAAGGIGQPLALLMKL-NPLVSRL-ALYDIANT--PG-VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~-~g~~~ev-~l~D~~~~--~~-~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ 103 (209)
|||+|+|++|.+|+.++..+.+ .++ ++ -.+|+++. .+ ...++.... ...+.. ++++++.++.+|++|-.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~--~lv~~v~~~~~~~~g~d~g~~~~~~-~~~~~v---~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGF--ELVGAVDRKPSAKVGKDVGELAGIG-PLGVPV---TDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTE--EEEEEEETTTSTTTTSBCHHHCTSS-T-SSBE---BS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCc--EEEEEEecCCcccccchhhhhhCcC-Cccccc---chhHHHhcccCCEEEEc
Confidence 6999999999999999999988 555 54 45556431 11 111222221 112222 35788999999999887
Q ss_pred C
Q 028437 104 A 104 (209)
Q Consensus 104 a 104 (209)
.
T Consensus 75 T 75 (124)
T PF01113_consen 75 T 75 (124)
T ss_dssp S
T ss_pred C
Confidence 3
No 355
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.57 E-value=0.00025 Score=53.76 Aligned_cols=73 Identities=21% Similarity=0.378 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..+++|+|| |.+|+.++..|...|. .+|++++|+..+. ....+... .+.... .+++.+.+.++|+||.+.+
T Consensus 12 ~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra~~l~~~~~~~----~~~~~~-~~~~~~~~~~~DivI~aT~ 84 (135)
T PF01488_consen 12 GKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERAEALAEEFGGV----NIEAIP-LEDLEEALQEADIVINATP 84 (135)
T ss_dssp TSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHHHHHHHHHTGC----SEEEEE-GGGHCHHHHTESEEEE-SS
T ss_pred CCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHcCcc----ccceee-HHHHHHHHhhCCeEEEecC
Confidence 359999999 9999999999999986 4799999975322 22333111 122221 2466678899999999976
Q ss_pred CC
Q 028437 106 VP 107 (209)
Q Consensus 106 ~~ 107 (209)
.+
T Consensus 85 ~~ 86 (135)
T PF01488_consen 85 SG 86 (135)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 356
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.57 E-value=0.00046 Score=54.70 Aligned_cols=69 Identities=23% Similarity=0.369 Sum_probs=47.8
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEc
Q 028437 24 ESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (209)
Q Consensus 24 ~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ 103 (209)
..-...+|+|+|. |.||+.++..|..-|. +|+.+|+...... ...+.. +. ..++++.++.||+|+++
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~~----~~----~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEFG----VE----YVSLDELLAQADIVSLH 98 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHTT----EE----ESSHHHHHHH-SEEEE-
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hccccc----ce----eeehhhhcchhhhhhhh
Confidence 3444569999999 9999999999999999 9999999753222 111111 11 13678999999999998
Q ss_pred CC
Q 028437 104 AG 105 (209)
Q Consensus 104 ag 105 (209)
..
T Consensus 99 ~p 100 (178)
T PF02826_consen 99 LP 100 (178)
T ss_dssp SS
T ss_pred hc
Confidence 64
No 357
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.56 E-value=0.0015 Score=56.04 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=44.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC---CCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE---DSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~---~aD~Vi~~a 104 (209)
|||+++|. |.+|+.++..|+..|+ +|.++|+++.. ..++.+.. ... ..++++.++ ++|+|+.+.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEA--VEALAEEG----ATG---ADSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence 58999999 9999999999999999 99999997532 22232221 111 123445554 469999885
No 358
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.55 E-value=0.00038 Score=57.73 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=30.4
Q ss_pred CCeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEecC
Q 028437 28 DRKVAVLGAA--GGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 28 ~~kI~IiGas--G~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
.+.++|+||+ +.+|..++..|++.|. +|++.+++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~ 42 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQN 42 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCc
Confidence 3579999997 6899999999999998 99999886
No 359
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.55 E-value=0.0021 Score=54.67 Aligned_cols=117 Identities=20% Similarity=0.292 Sum_probs=75.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCCCcceeEe----ecCCchh-------hhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINTRSEVAGY----MGNDQLG-------QALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~~~~v~~~----~~~~d~~-------~a~~ 95 (209)
+.|+|||||..||.++|.+|+..|. .++++.+.. ++....++.......++... ...++.+ ..+.
T Consensus 13 kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 13 KVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 4688999999999999999999998 888887753 22222333333211111111 1112223 3467
Q ss_pred CCCEEEEcCCCCCCCC-C---C---hhHHHHHH----HHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 96 DSDVVIIPAGVPRKPG-M---T---RDDLFNIN----AGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g-~---~---r~~~~~~N----~~~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
+.|+.|+.||... .+ . + ..+.++.| +-.++..++.|++.+ ++.|++++...+
T Consensus 91 ~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG 153 (282)
T KOG1205|consen 91 RVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAG 153 (282)
T ss_pred CCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccc
Confidence 8999999999876 32 1 1 22334444 567788888888876 788888887665
No 360
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.55 E-value=0.002 Score=54.98 Aligned_cols=117 Identities=18% Similarity=0.312 Sum_probs=73.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCC----CCcceeEe----ecCCchhhhcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHIN----TRSEVAGY----MGNDQLGQALED 96 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~----~~~~v~~~----~~~~d~~~a~~~ 96 (209)
....|+||||++.+|+.++.+++++|- .++++|++.. ...+..+.+.. +.+++... ......++.+.+
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 335899999988999999999999998 9999999852 22333333321 11111110 001234566779
Q ss_pred CCEEEEcCCCCC-CCC--CChhH---HHHHH----HHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 97 SDVVIIPAGVPR-KPG--MTRDD---LFNIN----AGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~-~~g--~~r~~---~~~~N----~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
.|++|+.||... ++- .++++ .++.| .-.++++++.|.+.+ ++.++.++.
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS 173 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIAS 173 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehh
Confidence 999999999754 222 22222 23344 456788999998754 555655553
No 361
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.0048 Score=51.03 Aligned_cols=114 Identities=18% Similarity=0.184 Sum_probs=65.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchhh---hcCCCCE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLGQ---ALEDSDV 99 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~~---a~~~aD~ 99 (209)
++++|+|++|.+|..++..|++.|. +|+++++++.. ....++.... ..++..+ ...++.++ .+...|+
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 5899999999999999999999998 99999987421 1122232211 0111111 11112222 2457899
Q ss_pred EEEcCCCCCCC---CCCh---hHHHHHHHHHHHHHHHH----HHhhCCCeEEEEecC
Q 028437 100 VIIPAGVPRKP---GMTR---DDLFNINAGIVKDLCSA----IAKYCPNAIVNMISN 146 (209)
Q Consensus 100 Vi~~ag~~~~~---g~~r---~~~~~~N~~~~~~i~~~----i~~~~p~~~viv~sn 146 (209)
+|+++|..... ..+. ...+..|+.....+.+. +.+. ..+.++++|.
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss 140 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG 140 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence 99999874311 1122 23456666654444444 4432 2356666653
No 362
>PRK08818 prephenate dehydrogenase; Provisional
Probab=97.54 E-value=0.00092 Score=59.11 Aligned_cols=57 Identities=26% Similarity=0.359 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~-g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
...++|+|+|.+|.+|..++..|.+. ++ +|+.+|+. +.. ..+.++.+++||+||+|+
T Consensus 2 ~~~~~I~IIGl~GliGgslA~alk~~~~~--~V~g~D~~----------d~~----------~~~~~~~v~~aDlVilav 59 (370)
T PRK08818 2 IAQPVVGIVGSAGAYGRWLARFLRTRMQL--EVIGHDPA----------DPG----------SLDPATLLQRADVLIFSA 59 (370)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCC--EEEEEcCC----------ccc----------cCCHHHHhcCCCEEEEeC
Confidence 34569999999999999999999875 66 89999873 110 124567789999999995
No 363
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=97.54 E-value=0.00059 Score=52.07 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=69.1
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHh-----hcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAAD-----VGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~d-----l~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|+|+|+ |.+|..++..|.+.|+ +|.++++.+ ...... +........+.......+..+..+.+|+||++.-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence 789999 9999999999999999 999999964 111111 1111100111111111111245678999999953
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~ 173 (209)
.. ...+.++.++.+. ++..++.+-|-.+. . +.+.+. +|++++++-
T Consensus 77 a~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~----~-~~l~~~--~~~~~v~~g 122 (151)
T PF02558_consen 77 AY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGN----E-EVLAEY--FPRPRVLGG 122 (151)
T ss_dssp GG----------------GHHHHHHHHCTGEETTEEEEEESSSSSH----H-HHHHCH--STGSGEEEE
T ss_pred cc----------------chHHHHHHHhhccCCCcEEEEEeCCCCc----H-HHHHHH--cCCCcEEEE
Confidence 21 1144566677665 67788889998872 2 333333 566777443
No 364
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.53 E-value=0.00032 Score=56.16 Aligned_cols=74 Identities=22% Similarity=0.278 Sum_probs=48.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEe--ecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGY--MGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~--~~~~d~~~a~~~aD~Vi~~a 104 (209)
++++|+|++|.+|+.++..|.+.|. +|++++++..+. ...++.+.. ...+... ...+++.++++++|+||.+.
T Consensus 29 ~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 29 KTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 5899999999999999999999887 999999874221 222232111 1112211 11123457889999988875
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
.
T Consensus 106 ~ 106 (194)
T cd01078 106 A 106 (194)
T ss_pred C
Confidence 4
No 365
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.53 E-value=0.00074 Score=58.90 Aligned_cols=66 Identities=24% Similarity=0.378 Sum_probs=48.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
-..++|+|+|. |.||+.++..|...|. +|..+|+........+. . .. ..++++.+++||+|+++..
T Consensus 148 L~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~---~----~~----~~~l~ell~~aDiV~l~lP 213 (333)
T PRK13243 148 VYGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEAEKEL---G----AE----YRPLEELLRESDFVSLHVP 213 (333)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhHHHc---C----CE----ecCHHHHHhhCCEEEEeCC
Confidence 34469999999 9999999999999998 99999986422111111 1 11 1257888999999999963
No 366
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=97.51 E-value=0.00028 Score=60.66 Aligned_cols=80 Identities=20% Similarity=0.346 Sum_probs=50.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCccEEEEEecCCch--h---HHHhhcCCCCC-----cceeEeecCCchhhhcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANTP--G---VAADVGHINTR-----SEVAGYMGNDQLGQALED 96 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~-g~~~ev~l~D~~~~~--~---~~~dl~~~~~~-----~~v~~~~~~~d~~~a~~~ 96 (209)
++||+.+|| |+||...+..++.+ ..+ +|.++|.+... + ..+.+.+...+ ++=+.+..++|.++++++
T Consensus 1 ~~kicciga-gyvggptcavia~kcp~i-~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~crgknlffstdiekai~e 78 (481)
T KOG2666|consen 1 MVKICCIGA-GYVGGPTCAVIALKCPDI-EVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTDIEKAIKE 78 (481)
T ss_pred CceEEEecC-cccCCcchheeeecCCce-EEEEEecCchHhhcccCCCCcccCCCHHHHHHHhcCCceeeecchHHHhhh
Confidence 469999999 99999887655443 322 89999986421 0 01112222110 111111225689999999
Q ss_pred CCEEEEcCCCCCC
Q 028437 97 SDVVIIPAGVPRK 109 (209)
Q Consensus 97 aD~Vi~~ag~~~~ 109 (209)
+|+|++++..|.+
T Consensus 79 adlvfisvntptk 91 (481)
T KOG2666|consen 79 ADLVFISVNTPTK 91 (481)
T ss_pred cceEEEEecCCcc
Confidence 9999999887754
No 367
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.51 E-value=0.0015 Score=66.47 Aligned_cols=116 Identities=13% Similarity=0.048 Sum_probs=70.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC--CccEEEEEecCCchhH-HHhhcC---------CCCCcceeEeec---------
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNP--LVSRLALYDIANTPGV-AADVGH---------INTRSEVAGYMG--------- 86 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g--~~~ev~l~D~~~~~~~-~~dl~~---------~~~~~~v~~~~~--------- 86 (209)
+++|+|+||+||+|++++..|++.+ ...+|++..+...... ...+.+ .....++..+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4799999999999999999999876 2237787777532111 111110 000011222111
Q ss_pred -CCchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 87 -NDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 87 -~~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
...+++..+++|+|||+|+... ......++...|+..+.++++.+.+.... +++++|
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~-~~v~vS 1108 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVH-WVYPYSKLRDANVIGTINVLNLCAEGKAK-QFSFVS 1108 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEec-CccCHHHHHHhHHHHHHHHHHHHHhCCCc-eEEEEe
Confidence 1123445578999999987653 22334445567999999999999865433 455555
No 368
>PRK05599 hypothetical protein; Provisional
Probab=97.50 E-value=0.0083 Score=49.45 Aligned_cols=117 Identities=13% Similarity=0.168 Sum_probs=64.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeE----eecCCch-------hhhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAG----YMGNDQL-------GQALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~----~~~~~d~-------~~a~~ 95 (209)
|.++|+||++.+|..++..|. +|. +|++.++++. +....++...... .+.. +...++. .+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE--DVVLAARRPEAAQGLASDLRQRGAT-SVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhccCC-ceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999998 476 9999998642 2222333322110 1111 1111111 22235
Q ss_pred CCCEEEEcCCCCCCCC---CCh---hHHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 96 DSDVVIIPAGVPRKPG---MTR---DDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g---~~r---~~~~~~N~~----~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
..|++|+.+|...... .+. .+....|+. ..+.+.+.+.+....+.++++|....
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~ 140 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAG 140 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 6899999998743211 111 122333433 33344555654433567787775443
No 369
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.49 E-value=0.00049 Score=59.98 Aligned_cols=65 Identities=29% Similarity=0.383 Sum_probs=46.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMK-LNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~-~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
-..++|+|+|. |.+|+.++..|+ ..|. +|+.+|+...... . .. +.. ..++++++++||+|+++.
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~~g~--~V~~~d~~~~~~~-~---~~-----~~~---~~~l~ell~~aDvIvl~l 208 (332)
T PRK08605 144 IKDLKVAVIGT-GRIGLAVAKIFAKGYGS--DVVAYDPFPNAKA-A---TY-----VDY---KDTIEEAVEGADIVTLHM 208 (332)
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCccHhH-H---hh-----ccc---cCCHHHHHHhCCEEEEeC
Confidence 34579999999 999999999984 3466 9999998642211 1 10 111 236788999999999986
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
.
T Consensus 209 P 209 (332)
T PRK08605 209 P 209 (332)
T ss_pred C
Confidence 3
No 370
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=97.48 E-value=0.0025 Score=53.84 Aligned_cols=96 Identities=17% Similarity=0.241 Sum_probs=61.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~--~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
+|||+++|+ |.+|..++..|...|. ..+|++.++++.+.. ++... +.... +.+..++.+++|+||.+.
T Consensus 1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~-~g~~~-----~~~~~~~~~~advv~Lav- 70 (266)
T COG0345 1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAE-YGVVT-----TTDNQEAVEEADVVFLAV- 70 (266)
T ss_pred CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHH-cCCcc-----cCcHHHHHhhCCEEEEEe-
Confidence 479999999 9999999999999882 348888888643221 22221 11111 235568889999999996
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPV 148 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~ 148 (209)
+| +.+.++++.++...++..+|-+.-.+
T Consensus 71 ---KP------------q~~~~vl~~l~~~~~~~lvISiaAGv 98 (266)
T COG0345 71 ---KP------------QDLEEVLSKLKPLTKDKLVISIAAGV 98 (266)
T ss_pred ---Ch------------HhHHHHHHHhhcccCCCEEEEEeCCC
Confidence 22 22356666666533455554444333
No 371
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.47 E-value=0.00029 Score=61.45 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
++||+|+||+|++|..++..|.++++ ..++..+.++...++...+... .+... .. + ..+++++|+||++.|.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~----~i~v~-d~-~-~~~~~~vDvVf~A~g~ 73 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGK----ELKVE-DL-T-TFDFSGVDIALFSAGG 73 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCc----eeEEe-eC-C-HHHHcCCCEEEECCCh
Confidence 46999999999999999999998776 2377777665333332222221 12211 11 1 2356799999999764
No 372
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.46 E-value=0.00099 Score=56.47 Aligned_cols=66 Identities=11% Similarity=0.254 Sum_probs=46.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC--ccEEEEEecCCchhHHHhhcC-CCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPL--VSRLALYDIANTPGVAADVGH-INTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~--~~ev~l~D~~~~~~~~~dl~~-~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+||++||+ |.+|++++..|++.|+ ..+|+++|+++.. ...+.+ .. +.. .++..+.+++||+||++.
T Consensus 3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~--~~~l~~~~g----~~~---~~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSN--LKNASDKYG----ITI---TTNNNEVANSADILILSI 71 (272)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHH--HHHHHHhcC----cEE---eCCcHHHHhhCCEEEEEe
Confidence 48999999 9999999999998885 3479999986422 222222 11 111 124457788999999996
No 373
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=97.46 E-value=0.00034 Score=61.04 Aligned_cols=73 Identities=21% Similarity=0.295 Sum_probs=47.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.+.+||+|+||||++|..+...|.++.| ..+|..+..+...++...+... .+... .. + +.++.++|+||+++
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~----~~~v~-~~-~-~~~~~~~Dvvf~a~ 74 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGK----SVTVQ-DA-A-EFDWSQAQLAFFVA 74 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCc----ceEEE-eC-c-hhhccCCCEEEECC
Confidence 4567999999999999999999988544 3488888665433333222221 12211 11 1 23457899999986
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
+
T Consensus 75 p 75 (336)
T PRK08040 75 G 75 (336)
T ss_pred C
Confidence 5
No 374
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.46 E-value=0.0014 Score=61.77 Aligned_cols=138 Identities=13% Similarity=0.149 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCc---hh-hhcCCCCEEEEc
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQ---LG-QALEDSDVVIIP 103 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d---~~-~a~~~aD~Vi~~ 103 (209)
..+|.|+|. |.+|+.++..|.++|+ +++++|.|+. .+..+.+..... +.+ +.++ ++ .-+++||.+|.+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~--~v~~~~~~g~~v-~~G--Dat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGV--KMTVLDHDPD--HIETLRKFGMKV-FYG--DATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCC--CEEEEECCHH--HHHHHHhcCCeE-EEE--eCCCHHHHHhcCCCcCCEEEEE
Confidence 368999999 9999999999999999 9999999863 222333322211 111 1122 22 335689999998
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEEehhhHHHHHH
Q 028437 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGVTTLDVVRAKT 183 (209)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~~~lds~r~~~ 183 (209)
... -+.| ..++..+++.+|+.+++.-++... -.+.+.+.+ .+.++--+...+.++.+
T Consensus 472 ~~d-----------~~~n----~~i~~~ar~~~p~~~iiaRa~d~~-----~~~~L~~~G---ad~v~~e~~e~sl~l~~ 528 (621)
T PRK03562 472 IDD-----------PQTS----LQLVELVKEHFPHLQIIARARDVD-----HYIRLRQAG---VEKPERETFEGALKSGR 528 (621)
T ss_pred eCC-----------HHHH----HHHHHHHHHhCCCCeEEEEECCHH-----HHHHHHHCC---CCEEehhhHhHHHHHHH
Confidence 421 1344 345666777788876655443222 123344432 34443334444555666
Q ss_pred HHHHHcCCCCCCe
Q 028437 184 FYAGKANVNVAGL 196 (209)
Q Consensus 184 ~la~~l~v~~~~v 196 (209)
.+-+.+|++++++
T Consensus 529 ~~L~~lg~~~~~~ 541 (621)
T PRK03562 529 LVLESLGLGPYEA 541 (621)
T ss_pred HHHHHcCCCHHHH
Confidence 6667777776544
No 375
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=97.45 E-value=0.0036 Score=53.85 Aligned_cols=115 Identities=16% Similarity=0.102 Sum_probs=67.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC--------CCCcceeEeecCCchhhhcCCCCE
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI--------NTRSEVAGYMGNDQLGQALEDSDV 99 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~--------~~~~~v~~~~~~~d~~~a~~~aD~ 99 (209)
.|||+|+|+ |.||..++..|.+.|+ +|+++++.+. ....+... .....+... ..+ .+....+|+
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~--~~~~i~~~~Gl~i~~~g~~~~~~~~--~~~-~~~~~~~D~ 73 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQ--RLAAYQQAGGLTLVEQGQASLYAIP--AET-ADAAEPIHR 73 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechH--HHHHHhhcCCeEEeeCCcceeeccC--CCC-cccccccCE
Confidence 369999999 9999999999999998 9999999531 11111111 000001100 011 123457899
Q ss_pred EEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCCcHHHHHHHHHHhCCCCCCcEEEE
Q 028437 100 VIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKY-CPNAIVNMISNPVNSTVPIAAEVFKKAGTYNEKKLFGV 173 (209)
Q Consensus 100 Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~-~p~~~viv~snP~~~~~~i~~~~~~~~~~~p~~~vig~ 173 (209)
||++.-.. -..+.++.+..+ .++..++.+-|-++..- .+.+. +|.+++++-
T Consensus 74 viv~vK~~----------------~~~~al~~l~~~l~~~t~vv~lQNGv~~~e-----~l~~~--~~~~~v~~g 125 (305)
T PRK05708 74 LLLACKAY----------------DAEPAVASLAHRLAPGAELLLLQNGLGSQD-----AVAAR--VPHARCIFA 125 (305)
T ss_pred EEEECCHH----------------hHHHHHHHHHhhCCCCCEEEEEeCCCCCHH-----HHHHh--CCCCcEEEE
Confidence 99985211 113344455544 37788888899887322 23332 566666543
No 376
>PRK06484 short chain dehydrogenase; Validated
Probab=97.45 E-value=0.001 Score=60.79 Aligned_cols=114 Identities=22% Similarity=0.205 Sum_probs=65.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCccee-EeecCCchhh-------hcCCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVA-GYMGNDQLGQ-------ALEDSD 98 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~-~~~~~~d~~~-------a~~~aD 98 (209)
+.++|+||++.+|..++..|++.|. +|++++++... ....++.... . .+. ++...+++++ .+...|
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNVERARERADSLGPDH-H-ALAMDVSDEAQIREGFEQLHREFGRID 81 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCce-e-EEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999998 99999986421 1122221110 0 000 0111112222 234689
Q ss_pred EEEEcCCCCC---CC--CCC---hhHHHHHHHHHHHHHHHHHHhh----CCCeEEEEecC
Q 028437 99 VVIIPAGVPR---KP--GMT---RDDLFNINAGIVKDLCSAIAKY----CPNAIVNMISN 146 (209)
Q Consensus 99 ~Vi~~ag~~~---~~--g~~---r~~~~~~N~~~~~~i~~~i~~~----~p~~~viv~sn 146 (209)
++|+++|... .+ ..+ ....+..|+.....+.+.+.++ ...+.++++|.
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS 141 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS 141 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 9999998731 11 122 2345667766555555544433 23336777764
No 377
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=97.43 E-value=0.00049 Score=57.70 Aligned_cols=101 Identities=22% Similarity=0.261 Sum_probs=68.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhC----CCc-----cEEEEEecCCc--------hhHHHhhcCCCCCcceeEeecCCchh
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLN----PLV-----SRLALYDIANT--------PGVAADVGHINTRSEVAGYMGNDQLG 91 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~----g~~-----~ev~l~D~~~~--------~~~~~dl~~~~~~~~v~~~~~~~d~~ 91 (209)
.||++.|| |..|..++..|... |+- ++++++|++-+ .....++.+...+. .. ..++.
T Consensus 26 ~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~--~~---~~~L~ 99 (255)
T PF03949_consen 26 QRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPE--KD---WGSLL 99 (255)
T ss_dssp -EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTT--T-----SSHH
T ss_pred cEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCccc--cc---ccCHH
Confidence 49999999 99999998877654 873 68999999631 11122222222111 10 13789
Q ss_pred hhcCCC--CEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 92 QALEDS--DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 92 ~a~~~a--D~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
++++++ |++|=+.+.+. -+.+++++.|.++++..+|.-.|||..
T Consensus 100 eav~~~kPtvLIG~S~~~g--------------~ft~evv~~Ma~~~erPIIF~LSNPt~ 145 (255)
T PF03949_consen 100 EAVKGAKPTVLIGLSGQGG--------------AFTEEVVRAMAKHNERPIIFPLSNPTP 145 (255)
T ss_dssp HHHHCH--SEEEECSSSTT--------------SS-HHHHHHCHHHSSSEEEEE-SSSCG
T ss_pred HHHHhcCCCEEEEecCCCC--------------cCCHHHHHHHhccCCCCEEEECCCCCC
Confidence 999999 99998876542 245788999999999888888899976
No 378
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=97.43 E-value=0.00044 Score=59.20 Aligned_cols=64 Identities=22% Similarity=0.335 Sum_probs=46.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|||++||. |.+|..++..|++.|+ +|.++|+++. ..++..... .. ..+..++.++||+||++..
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~g~----~~---~~s~~~~~~~advVi~~v~ 64 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSLGA----VS---VETARQVTEASDIIFIMVP 64 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHcCC----ee---cCCHHHHHhcCCEEEEeCC
Confidence 48999999 9999999999999998 9999998652 122322211 11 1245677889999999853
No 379
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.01 Score=50.93 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=30.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
+.++|+||++.+|..++..|++.|. +|++.+++
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~ 41 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGA--TVYVTGRS 41 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecc
Confidence 5789999999999999999999998 99999986
No 380
>PLN02712 arogenate dehydrogenase
Probab=97.41 E-value=0.0035 Score=59.58 Aligned_cols=65 Identities=18% Similarity=0.156 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhc-CCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQAL-EDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~-~~aD~Vi~~a 104 (209)
++|||+|+|. |.+|..++..|.+.|+ +|..+|++.....+.++ . +.. ..+.++.+ +++|+||++.
T Consensus 51 ~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~---G----v~~---~~d~~e~~~~~aDvViLav 116 (667)
T PLN02712 51 TQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSL---G----VSF---FLDPHDLCERHPDVILLCT 116 (667)
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHc---C----CEE---eCCHHHHhhcCCCEEEEcC
Confidence 4479999998 9999999999999998 99999986322122211 1 111 12455544 5799999995
No 381
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.40 E-value=0.0011 Score=57.57 Aligned_cols=74 Identities=30% Similarity=0.399 Sum_probs=47.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHH-HhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVA-ADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~-~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
++||+|+||+|.||+.++..|.++.+ +.++.++-..+..++. .++...... +... ..+ ...++++|+|++++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~--v~~~--~~~-~~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIG--VPED--AAD-EFVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCcccc--Cccc--ccc-ccccccCCEEEEeCc
Confidence 46999999999999999999998654 6667777765433333 333332111 1100 012 245669999999986
Q ss_pred C
Q 028437 106 V 106 (209)
Q Consensus 106 ~ 106 (209)
.
T Consensus 76 ~ 76 (334)
T COG0136 76 G 76 (334)
T ss_pred h
Confidence 3
No 382
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.39 E-value=0.0058 Score=50.42 Aligned_cols=114 Identities=16% Similarity=0.167 Sum_probs=66.3
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEecCCc-----------hh--HHHhhcCCCCCcceeEee----cCCc
Q 028437 29 RKVAVLGAAG--GIGQPLALLMKLNPLVSRLALYDIANT-----------PG--VAADVGHINTRSEVAGYM----GNDQ 89 (209)
Q Consensus 29 ~kI~IiGasG--~vG~~la~~L~~~g~~~ev~l~D~~~~-----------~~--~~~dl~~~~~~~~v~~~~----~~~d 89 (209)
++|.|+||+| .+|..++..|++.|. +|+++++++. .. ...++.... .++..+. ...+
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGI--DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG--VRCEHMEIDLSQPYA 81 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCC--cEEEEcCCccccccccccchhhHHHHHHHHHhcC--CeEEEEECCCCCHHH
Confidence 4799999985 699999999999998 9999987611 01 111221111 1111111 0111
Q ss_pred hhh-------hcCCCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 028437 90 LGQ-------ALEDSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKY---CPNAIVNMISN 146 (209)
Q Consensus 90 ~~~-------a~~~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~---~p~~~viv~sn 146 (209)
+++ .+...|+||+++|...... .+ ....+..|+.....+.+.+.+. .+...++++|.
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss 154 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS 154 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECC
Confidence 112 2345799999998642111 12 2344678888777777776543 23456777764
No 383
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.39 E-value=0.001 Score=56.82 Aligned_cols=75 Identities=23% Similarity=0.386 Sum_probs=50.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEc--
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP-- 103 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~-- 103 (209)
..||+|+|+ |.+|++++..|...|. .+|+++|++..+ ..+.++.+......+.. .+++++.++++|+||++
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~-~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~---~~~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGV-ERLTIFDVDPARAAALADELNARFPAARATA---GSDLAAALAAADGLVHATP 201 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhCCCeEEEe---ccchHhhhCCCCEEEECCc
Confidence 358999999 9999999999999885 589999997532 23334433211111111 23455678899999999
Q ss_pred CCCC
Q 028437 104 AGVP 107 (209)
Q Consensus 104 ag~~ 107 (209)
+|..
T Consensus 202 ~Gm~ 205 (284)
T PRK12549 202 TGMA 205 (284)
T ss_pred CCCC
Confidence 4543
No 384
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.39 E-value=0.0015 Score=56.09 Aligned_cols=114 Identities=15% Similarity=0.064 Sum_probs=65.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEecCCchh--HHHhhcCCCCCcceeEe----ecCCchhhh-------c
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPG--VAADVGHINTRSEVAGY----MGNDQLGQA-------L 94 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g-~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~----~~~~d~~~a-------~ 94 (209)
+.++|+||++.+|.+++..|++.| + +|++.+++.... ...++.... ..+..+ ...++.+++ +
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEW--HVIMACRDFLKAEQAAKSLGMPK--DSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCC--EEEEEeCCHHHHHHHHHHhcCCC--CeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 378999999999999999999999 8 999999864211 122232111 111111 001112211 3
Q ss_pred CCCCEEEEcCCCCCC----CCCCh---hHHHHHHHHH----HHHHHHHHHhhCC-CeEEEEecC
Q 028437 95 EDSDVVIIPAGVPRK----PGMTR---DDLFNINAGI----VKDLCSAIAKYCP-NAIVNMISN 146 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~----~g~~r---~~~~~~N~~~----~~~i~~~i~~~~p-~~~viv~sn 146 (209)
...|++|+.||.... +..+. ...+..|+.. ++.+.+.+++... .++||++|.
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS 143 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGS 143 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence 468999999986421 11222 2345566654 4555666654322 357777764
No 385
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.38 E-value=0.0002 Score=63.34 Aligned_cols=73 Identities=25% Similarity=0.292 Sum_probs=45.1
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeE--ee--cCCchhhhcCCCCEEEEcCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAG--YM--GNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~--~~--~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
|+|+|+ |++|+.++..|++.+...+|++.|++..+.. .+........+.. .. ..+++++.++++|+||+++|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAE--RLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHH--HHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHH--HHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 789999 9999999999999886558999999853222 1111100011111 11 122467789999999999864
No 386
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.37 E-value=0.013 Score=49.11 Aligned_cols=114 Identities=14% Similarity=0.141 Sum_probs=63.4
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEecCCch-hHHHhhcCC-C----CCcceeEeecCCch-------hhh
Q 028437 29 RKVAVLGAAG--GIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHI-N----TRSEVAGYMGNDQL-------GQA 93 (209)
Q Consensus 29 ~kI~IiGasG--~vG~~la~~L~~~g~~~ev~l~D~~~~~-~~~~dl~~~-~----~~~~v~~~~~~~d~-------~~a 93 (209)
+.++|+||++ .+|..++..|++.|. +|++.+++... ....++... . ...++.. .++. .+.
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d---~~~v~~~~~~~~~~ 82 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGA--ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED---IASVDAVFEALEKK 82 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCC--EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC---HHHHHHHHHHHHHH
Confidence 4789999975 899999999999998 99999886321 111222111 1 0111111 1111 122
Q ss_pred cCCCCEEEEcCCCCCC-----C--CCChh---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCC
Q 028437 94 LEDSDVVIIPAGVPRK-----P--GMTRD---DLFNINAGIVKDLCSAIAKYC-PNAIVNMISNP 147 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~-----~--g~~r~---~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP 147 (209)
+...|++|++||.... + ..+.+ ..+..|+.....+.+.+..+- ..+.+|++|..
T Consensus 83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~ 147 (271)
T PRK06505 83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYG 147 (271)
T ss_pred hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCC
Confidence 3568999999997531 1 12222 335566665544444433221 23667777643
No 387
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.37 E-value=0.0016 Score=54.43 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=45.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|||+|+|+ |.+|+.++..|.+.|+ ..++.++++++.. ..++.... . .... ..+..++++++|+||++..
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~-~-~~~~---~~~~~~~~~~aDvVilav~ 70 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF-P-KVRI---AKDNQAVVDRSDVVFLAVR 70 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc-C-CceE---eCCHHHHHHhCCEEEEEeC
Confidence 48999999 9999999999998875 3456788876422 22222211 0 0111 1345677889999999963
No 388
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=97.36 E-value=0.0022 Score=52.74 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=43.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g-~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|||.++|. |.+|..++..+.... -+.-+.++|++..+.. ++...-..+. .+++.+.+.+.|.++.+|+
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~--~~~~~~~~~~------~s~ide~~~~~DlvVEaAS 69 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKAK--ELEASVGRRC------VSDIDELIAEVDLVVEAAS 69 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHHH--HHHhhcCCCc------cccHHHHhhccceeeeeCC
Confidence 58999999 999999998776553 3567888898753222 2222211100 1345566678888888874
No 389
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.36 E-value=0.0015 Score=56.57 Aligned_cols=65 Identities=22% Similarity=0.321 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..++|+|+|. |.||+.++..|..-|. +|..+|+..... ..... +....++++.+++||+|+++..
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~--~~~~~---------~~~~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW--PGVQS---------FAGREELSAFLSQTRVLINLLP 199 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC--CCcee---------ecccccHHHHHhcCCEEEECCC
Confidence 3469999999 9999999999999998 999999853210 00000 0012367899999999999853
No 390
>PRK07574 formate dehydrogenase; Provisional
Probab=97.36 E-value=0.0016 Score=57.95 Aligned_cols=67 Identities=21% Similarity=0.253 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..++|+|+|. |.||+.++..|..-|. +|..+|+........ .... +.. ..++++.+++||+|+++..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~~--~~~g----~~~---~~~l~ell~~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEVE--QELG----LTY---HVSFDSLVSVCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhhH--hhcC----cee---cCCHHHHhhcCCEEEEcCC
Confidence 4469999999 9999999999999998 999999864211111 1111 111 1357899999999999853
No 391
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.35 E-value=0.0026 Score=50.36 Aligned_cols=33 Identities=36% Similarity=0.633 Sum_probs=30.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
||+|+|+ |.+|+.++..|+..|. ++++++|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 6899999 9999999999999997 5899999973
No 392
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0035 Score=51.91 Aligned_cols=115 Identities=20% Similarity=0.181 Sum_probs=63.0
Q ss_pred CeEEEEcCCC-chHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEee----cCCchhhh-------c
Q 028437 29 RKVAVLGAAG-GIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM----GNDQLGQA-------L 94 (209)
Q Consensus 29 ~kI~IiGasG-~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~----~~~d~~~a-------~ 94 (209)
++++|+||+| .+|..++..|++.|. +|++.|++.. .....++........+..+. ..++.+++ +
T Consensus 18 k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5899999987 599999999999998 8999998642 11222232210000111111 11122222 2
Q ss_pred CCCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHH----hhCCCeEEEEec
Q 028437 95 EDSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIA----KYCPNAIVNMIS 145 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~----~~~p~~~viv~s 145 (209)
...|++|+++|...... .+ ..+.+..|+.....+++.+. +....+.+++++
T Consensus 96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~s 156 (262)
T PRK07831 96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNA 156 (262)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 46799999998643111 11 22334566665555444443 322245666654
No 393
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0046 Score=52.33 Aligned_cols=33 Identities=42% Similarity=0.611 Sum_probs=30.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
+.++|+||++.+|..++..|++.|. +|++.+++
T Consensus 7 k~~lITGas~GIG~aia~~la~~G~--~vii~~~~ 39 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIG 39 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEeeCC
Confidence 5799999999999999999999998 89998875
No 394
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.33 E-value=0.0065 Score=51.77 Aligned_cols=68 Identities=25% Similarity=0.405 Sum_probs=45.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHH---HhhcCCCCCcceeEeecCCc-hhhhcCCCCEEEEc
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVA---ADVGHINTRSEVAGYMGNDQ-LGQALEDSDVVIIP 103 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~---~dl~~~~~~~~v~~~~~~~d-~~~a~~~aD~Vi~~ 103 (209)
+++|+|+|. |.+|..++..|...|+ .+.+++++...+.. .++.-.+ .. +.+ ..++.+++|+||.+
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv~d---~~-----~~~~~~~~~~~aD~Viva 71 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGVID---EL-----TVAGLAEAAAEADLVIVA 71 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCccc---cc-----ccchhhhhcccCCEEEEe
Confidence 469999998 9999999999999999 66666665422211 1122111 00 112 25778889999999
Q ss_pred CCC
Q 028437 104 AGV 106 (209)
Q Consensus 104 ag~ 106 (209)
+-+
T Consensus 72 vPi 74 (279)
T COG0287 72 VPI 74 (279)
T ss_pred ccH
Confidence 643
No 395
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.33 E-value=0.0023 Score=49.05 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=72.3
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--c--hhHHHhhcCCCCCcceeEee-c-C--C-------chhhhc
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--T--PGVAADVGHINTRSEVAGYM-G-N--D-------QLGQAL 94 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~--~~~~~dl~~~~~~~~v~~~~-~-~--~-------d~~~a~ 94 (209)
.++|+||+|.+|..++..|+++|- ..|+++++++ . .....++.... ..+..+. + + + ...+..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA-RVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT-EEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc-eEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 589999999999999999999943 2888888872 1 11222333222 1122111 0 1 1 112234
Q ss_pred CCCCEEEEcCCCCCCCCC------ChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 95 EDSDVVIIPAGVPRKPGM------TRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 95 ~~aD~Vi~~ag~~~~~g~------~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
...|++|+++|....... ...+.+..|+.....+.+.+.. .+.+.++++|...+
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~ 138 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAG 138 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGG
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhh
Confidence 578999999998752211 1234567787777777777777 55778888875544
No 396
>PRK08507 prephenate dehydrogenase; Validated
Probab=97.32 E-value=0.0024 Score=54.00 Aligned_cols=66 Identities=20% Similarity=0.299 Sum_probs=44.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|||+|+|. |.+|..++..|.+.|+..+|+.+|+++.. ...+...... .. ..+.+++ .++|+||++.
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~--~~~~~~~g~~---~~---~~~~~~~-~~aD~Vilav 66 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELH--LKKALELGLV---DE---IVSFEEL-KKCDVIFLAI 66 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHH--HHHHHHCCCC---cc---cCCHHHH-hcCCEEEEeC
Confidence 58999998 99999999999998864478899986422 1122222110 00 1234444 4599999996
No 397
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.32 E-value=0.00069 Score=59.35 Aligned_cols=73 Identities=21% Similarity=0.344 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHh-CCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKL-NPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~-~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+.+||+|+||||++|+.++..|.. ..+ +.++.++......++...+... ...+.. .+ .+.++++|+||+++
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~--~l~v~~----~~-~~~~~~~Divf~a~ 76 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGR--EIIIQE----AK-INSFEGVDIAFFSA 76 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCc--ceEEEe----CC-HHHhcCCCEEEECC
Confidence 447999999999999999999985 444 3458888765433333333322 112221 13 24568999999987
Q ss_pred CC
Q 028437 105 GV 106 (209)
Q Consensus 105 g~ 106 (209)
+.
T Consensus 77 ~~ 78 (347)
T PRK06728 77 GG 78 (347)
T ss_pred Ch
Confidence 53
No 398
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.32 E-value=0.0068 Score=50.35 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=62.7
Q ss_pred CeEEEEcC--CCchHHHHHHHHHhCCCccEEEEEecCCchh----HHHhhcCCC--CCcceeEeecCCch-------hhh
Q 028437 29 RKVAVLGA--AGGIGQPLALLMKLNPLVSRLALYDIANTPG----VAADVGHIN--TRSEVAGYMGNDQL-------GQA 93 (209)
Q Consensus 29 ~kI~IiGa--sG~vG~~la~~L~~~g~~~ev~l~D~~~~~~----~~~dl~~~~--~~~~v~~~~~~~d~-------~~a 93 (209)
+.++|+|| ++.+|..++..|++.|. .|++.+++.... ...++.... ...++.. .++. .+.
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~i~~~~~~~~~~ 82 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQGA--EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN---EEHLASLADRVREH 82 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCCC--EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC---HHHHHHHHHHHHHH
Confidence 47999998 78999999999999998 999998753111 111222110 0111111 1111 122
Q ss_pred cCCCCEEEEcCCCCCC-----C--CCChh---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEec
Q 028437 94 LEDSDVVIIPAGVPRK-----P--GMTRD---DLFNINAGIVKDLCSAIAKYC-PNAIVNMIS 145 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~-----~--g~~r~---~~~~~N~~~~~~i~~~i~~~~-p~~~viv~s 145 (209)
+...|++|+.||.... + ..+.+ ..+..|+.....+.+.+...- +.+.+++++
T Consensus 83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is 145 (256)
T PRK07889 83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLD 145 (256)
T ss_pred cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEe
Confidence 4568999999987521 1 11222 246677665554444443322 335565554
No 399
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=97.31 E-value=0.0016 Score=59.39 Aligned_cols=70 Identities=17% Similarity=0.289 Sum_probs=45.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC-CCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI-NTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~-~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+|+++|. |.+|.+++..|+..|+ +|.++|+++.+ ..++... .....+.......++.+.++++|+|+.+.
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v 71 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMV 71 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEEC
Confidence 4899999 9999999999999999 99999997532 2223221 00001111111123333456799999985
No 400
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.31 E-value=0.00068 Score=59.43 Aligned_cols=74 Identities=19% Similarity=0.297 Sum_probs=46.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
..++||+|+||+|++|..++..|..++| ..++..+......++..+... ....+.. .+ .++++++|+||+++
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~--~~~~v~~----~~-~~~~~~~D~vf~a~ 77 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEG--RDYTVEE----LT-EDSFDGVDIALFSA 77 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecC--ceeEEEe----CC-HHHHcCCCEEEECC
Confidence 3457999999999999999999988665 346766655432222222211 1111111 12 35678999999987
Q ss_pred CC
Q 028437 105 GV 106 (209)
Q Consensus 105 g~ 106 (209)
+.
T Consensus 78 p~ 79 (344)
T PLN02383 78 GG 79 (344)
T ss_pred Cc
Confidence 64
No 401
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0099 Score=48.66 Aligned_cols=114 Identities=11% Similarity=0.149 Sum_probs=64.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcceeEe----ecCCchh-------hhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEVAGY----MGNDQLG-------QALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~~~----~~~~d~~-------~a~~ 95 (209)
+.++|+||++.+|..++..|++.|. +|+++++++.. ....++..... .+..+ ...++.+ +.+.
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALTD--NVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcCC--CeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4899999999999999999999999 99999987521 12222322111 11111 1111222 2234
Q ss_pred -CCCEEEEcCCCCCCCC----CChhH---HHHHHHH----HHHHHHHHHHhhCCCeEEEEecC
Q 028437 96 -DSDVVIIPAGVPRKPG----MTRDD---LFNINAG----IVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 -~aD~Vi~~ag~~~~~g----~~r~~---~~~~N~~----~~~~i~~~i~~~~p~~~viv~sn 146 (209)
..|++|+++|....++ .+..+ .+..|.. ..+.+.+.+.+....+.++++|.
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 144 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS 144 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 6899999997432211 22222 2333433 33445555655443567777764
No 402
>PLN02712 arogenate dehydrogenase
Probab=97.30 E-value=0.0053 Score=58.36 Aligned_cols=66 Identities=21% Similarity=0.255 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcC-CCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALE-DSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~-~aD~Vi~~a 104 (209)
..+|||+|||. |.+|..++..|...|+ +|+.+|++.......++ . +.. ..++++.++ ++|+||++.
T Consensus 367 ~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~~---G----v~~---~~~~~el~~~~aDvVILav 433 (667)
T PLN02712 367 GSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQKL---G----VSY---FSDADDLCEEHPEVILLCT 433 (667)
T ss_pred CCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHHc---C----CeE---eCCHHHHHhcCCCEEEECC
Confidence 35579999998 9999999999999898 99999997421111111 1 111 135556564 589999995
No 403
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=97.30 E-value=0.0021 Score=48.96 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=65.7
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--H---HHhhcCCCCCcceeEee-c---CCchhhhc------
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--V---AADVGHINTRSEVAGYM-G---NDQLGQAL------ 94 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~---~~dl~~~~~~~~v~~~~-~---~~d~~~a~------ 94 (209)
++.|+||+|++|.+++..|.++|. ..|.+.++++... . ..++..... .+..+. + ..++++.+
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA-RHLVLLSRSGPDAPGAAELLAELEALGA--EVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhC-CeEEEEeCCCCCCccHHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHHH
Confidence 689999999999999999998885 1577777753211 1 122222111 111111 0 11122222
Q ss_pred -CCCCEEEEcCCCCCCCC---CC---hhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 95 -EDSDVVIIPAGVPRKPG---MT---RDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 95 -~~aD~Vi~~ag~~~~~g---~~---r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
...|.+|+++|...... .+ ....+..|+.....+.+.+.+..+ .+++++|.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~ii~~ss 136 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPL-DFFVLFSS 136 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCc-ceEEEEcc
Confidence 33699999998643111 11 234567788888888888865443 45666653
No 404
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.28 E-value=0.0014 Score=58.92 Aligned_cols=97 Identities=20% Similarity=0.221 Sum_probs=58.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcC-CCCCcceeEeecCCchhhh-cCCCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGH-INTRSEVAGYMGNDQLGQA-LEDSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~-~~~~~~v~~~~~~~d~~~a-~~~aD~Vi~~ag~ 106 (209)
|||.|+|+ |.+|..++..|...|+ +++++|+++.. ...+.. ...............++++ ++++|.||.+.+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~--~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEER--LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 58999999 9999999999999998 99999997532 222222 1111000001011234555 7899999998531
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 107 PRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 107 ~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
...|. .++..+++.+|+..++..+
T Consensus 76 -----------~~~n~----~~~~~~r~~~~~~~ii~~~ 99 (453)
T PRK09496 76 -----------DETNM----VACQIAKSLFGAPTTIARV 99 (453)
T ss_pred -----------hHHHH----HHHHHHHHhcCCCeEEEEE
Confidence 12343 2444455555665555544
No 405
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.28 E-value=0.0017 Score=59.96 Aligned_cols=68 Identities=25% Similarity=0.364 Sum_probs=49.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.-..++|+|+|. |.+|+.++..|...|. +|..+|+........++. +.. .+++++.+++||+|+.+.
T Consensus 135 ~l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 135 ELYGKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQLG-------VEL---VDDLDELLARADFITVHT 201 (525)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhcC-------CEE---cCCHHHHHhhCCEEEEcc
Confidence 334469999999 9999999999998898 999999843222222221 111 135788999999999986
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
.
T Consensus 202 P 202 (525)
T TIGR01327 202 P 202 (525)
T ss_pred C
Confidence 4
No 406
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=97.28 E-value=0.0015 Score=57.54 Aligned_cols=72 Identities=19% Similarity=0.265 Sum_probs=46.5
Q ss_pred CeEEEEcCCCchHHHHHHHHH-hCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMK-LNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~-~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
+||+|+||+|.||+.+...|. ++.+ ..+++++......+....+.... ..+.. .++ .+.++++|++++++|.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~--~~v~~---~~~-~~~~~~vDivffa~g~ 74 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTT--GTLQD---AFD-IDALKALDIIITCQGG 74 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCc--ceEEc---Ccc-cccccCCCEEEEcCCH
Confidence 489999999999999999888 5555 36788887643322222222211 12222 112 2468899999999863
No 407
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.28 E-value=0.019 Score=47.72 Aligned_cols=113 Identities=12% Similarity=0.056 Sum_probs=64.0
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEecCCch-hHHHh----hcCCC-CCcceeEeecCCch-------hhh
Q 028437 29 RKVAVLGAA--GGIGQPLALLMKLNPLVSRLALYDIANTP-GVAAD----VGHIN-TRSEVAGYMGNDQL-------GQA 93 (209)
Q Consensus 29 ~kI~IiGas--G~vG~~la~~L~~~g~~~ev~l~D~~~~~-~~~~d----l~~~~-~~~~v~~~~~~~d~-------~~a 93 (209)
+.++|+||+ +.+|..++..|++.|. +|++.+++... ....+ +.... ..+++.. .++. .+.
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~ 85 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALGA--ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE---PGQLEAVFARIAEE 85 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC---HHHHHHHHHHHHHH
Confidence 478899996 4899999999999998 99999986421 11112 21110 0111111 1112 122
Q ss_pred cCCCCEEEEcCCCCCCC-------CCC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 94 LEDSDVVIIPAGVPRKP-------GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~~-------g~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
+...|++|++||..... ..+ ..+.+..|+.....+.+.+..+- ..+.++++|.
T Consensus 86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss 149 (258)
T PRK07533 86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSY 149 (258)
T ss_pred cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 35679999999874310 112 23445667766665555544332 2356666654
No 408
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.26 E-value=0.002 Score=56.96 Aligned_cols=73 Identities=21% Similarity=0.269 Sum_probs=44.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLN-PL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~-g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|++|+|+||||++|+.+...++.+ .+ ..++.++......+...++.... ..+.. ..+ .+.++++|+||++++
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~~--~~v~~---~~~-~~~~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGKE--GTLQD---AFD-IDALKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCCc--ceEEe---cCC-hhHhcCCCEEEECCC
Confidence 369999999999999999855554 44 34577776532212222222211 11111 122 245789999999975
Q ss_pred C
Q 028437 106 V 106 (209)
Q Consensus 106 ~ 106 (209)
.
T Consensus 75 ~ 75 (369)
T PRK06598 75 G 75 (369)
T ss_pred H
Confidence 3
No 409
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.26 E-value=0.0046 Score=50.33 Aligned_cols=115 Identities=20% Similarity=0.235 Sum_probs=69.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch-hHHHhhcCCCCCcceeEeecCCc-------hhhhcCCCCEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAADVGHINTRSEVAGYMGNDQ-------LGQALEDSDVV 100 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~-~~~~dl~~~~~~~~v~~~~~~~d-------~~~a~~~aD~V 100 (209)
..|+|+|++..||..++..+.+.|. +|.+..|++.. ..+..... .....+-++.+.++ +.+..-+-+++
T Consensus 6 nTiLITGG~sGIGl~lak~f~elgN--~VIi~gR~e~~L~e~~~~~p-~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELGN--TVIICGRNEERLAEAKAENP-EIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhCC--EEEEecCcHHHHHHHHhcCc-chheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 5899999999999999999999998 99999997521 11111111 11111111111111 22334577999
Q ss_pred EEcCCCCCCCCCC--------hhHHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCC
Q 028437 101 IIPAGVPRKPGMT--------RDDLFNINAG----IVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 101 i~~ag~~~~~g~~--------r~~~~~~N~~----~~~~i~~~i~~~~p~~~viv~snP 147 (209)
|+.||..+..+.. -.+-+..|+. .+..+.+.+.+ .|++.+|++|.-
T Consensus 83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~-q~~a~IInVSSG 140 (245)
T COG3967 83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR-QPEATIINVSSG 140 (245)
T ss_pred eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHh-CCCceEEEeccc
Confidence 9999986543311 1223444544 44455555554 478999999753
No 410
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.24 E-value=0.036 Score=46.07 Aligned_cols=117 Identities=10% Similarity=0.064 Sum_probs=64.3
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCC-CCCccee-EeecCCchh-------hhcCC
Q 028437 29 RKVAVLGAAG--GIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHI-NTRSEVA-GYMGNDQLG-------QALED 96 (209)
Q Consensus 29 ~kI~IiGasG--~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~-~~~~~v~-~~~~~~d~~-------~a~~~ 96 (209)
+.++|+||++ .+|..++..|++.|. +|++.+++.. .....++... .....+. ++...++.+ +.+..
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~--~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGA--ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCC--EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999975 699999999999998 8999887631 1122223211 1000000 011111122 22456
Q ss_pred CCEEEEcCCCCCC-----C--CCCh---hHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCC
Q 028437 97 SDVVIIPAGVPRK-----P--GMTR---DDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNP 147 (209)
Q Consensus 97 aD~Vi~~ag~~~~-----~--g~~r---~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP 147 (209)
.|++|+.+|.... + ..+. ...+..|+.....+.+.+...- ..+.|+++|..
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~ 148 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYY 148 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecC
Confidence 8999999886421 1 1122 2345566665555555443322 34677777654
No 411
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.23 E-value=0.001 Score=58.31 Aligned_cols=74 Identities=26% Similarity=0.337 Sum_probs=43.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEE-EEecCCchhH-HHh-hcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLA-LYDIANTPGV-AAD-VGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~-l~D~~~~~~~-~~d-l~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
|||+|+||||++|..++..|.+.... ++. +++.+...++ ..+ ..+........ +. ..+.++..+++|+||++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLN-LE-PIDEEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCce-ee-cCCHHHhhcCCCEEEECCC
Confidence 58999999999999999999877433 666 5576432222 111 11111000111 11 1133444568999999864
No 412
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.21 E-value=0.0017 Score=49.66 Aligned_cols=73 Identities=22% Similarity=0.361 Sum_probs=49.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
.++|+|+|+ |.+|..++..|.+.| ..+|.++|+++... ...++..... ... ..+.++.++++|+||.+..
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELGI--AIA----YLDLEELLAEADLIINTTP 90 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhccc--cee----ecchhhccccCCEEEeCcC
Confidence 468999999 999999999999886 23899999975322 1222222100 011 1245566899999999976
Q ss_pred CCC
Q 028437 106 VPR 108 (209)
Q Consensus 106 ~~~ 108 (209)
...
T Consensus 91 ~~~ 93 (155)
T cd01065 91 VGM 93 (155)
T ss_pred CCC
Confidence 543
No 413
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.21 E-value=0.0018 Score=48.77 Aligned_cols=34 Identities=26% Similarity=0.517 Sum_probs=30.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.||+|+|+ |.+|+.++..|+..|. +++.++|.+.
T Consensus 3 ~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~ 36 (135)
T PF00899_consen 3 KRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDI 36 (135)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSB
T ss_pred CEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcc
Confidence 58999999 9999999999999997 6999999973
No 414
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.20 E-value=0.0014 Score=58.08 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCccee-EeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVA-GYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~-~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
++.+|+|+|+ |.+|...+..+...|. +|.++|+++... ..+.... ...+. .....+++.+.++++|+||.+++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRADLLIGAVL 239 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCCEEEEccc
Confidence 4568999999 9999999999999998 899999975221 1111110 00111 01112346778899999999986
Q ss_pred CC
Q 028437 106 VP 107 (209)
Q Consensus 106 ~~ 107 (209)
.+
T Consensus 240 ~~ 241 (370)
T TIGR00518 240 IP 241 (370)
T ss_pred cC
Confidence 54
No 415
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=97.20 E-value=0.0047 Score=53.60 Aligned_cols=129 Identities=17% Similarity=0.346 Sum_probs=73.5
Q ss_pred cccCCCCCCCeEEEEcCCCchHHHHHHHHHhC----C-CccEEEEEecCCc-hh---HHHhh-cC--CC--------CCc
Q 028437 20 GYSSESVPDRKVAVLGAAGGIGQPLALLMKLN----P-LVSRLALYDIANT-PG---VAADV-GH--IN--------TRS 79 (209)
Q Consensus 20 ~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~----g-~~~ev~l~D~~~~-~~---~~~dl-~~--~~--------~~~ 79 (209)
..-+....+.||+|+|+ |..|++++..+... . +-.+|.++-..+. .+ ...|. +. .. .+.
T Consensus 13 ~~~~~~~~~~kV~ivGs-GnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee~i~~~~~~L~eiIN~~heN~KYlpg~~lP~ 91 (372)
T KOG2711|consen 13 NLGKAERDPLKVCIVGS-GNWGSAIAKIVGENVKEFPIFDPQVRMWVFEEEINGEAEKLTEIINSRHENVKYLPGIKLPE 91 (372)
T ss_pred ccCchhcCceEEEEEcc-ChHHHHHHHHHhhhhhhccccCceeeEEEeccccCChhHHHHHHhccccccccccCCccCCC
Confidence 33344445679999998 99999999876543 1 1347777776531 11 11111 11 11 122
Q ss_pred ceeEeecCCchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCC-----cHH
Q 028437 80 EVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVNS-----TVP 153 (209)
Q Consensus 80 ~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~~-----~~~ 153 (209)
.+.. .+|+.+++++||++|+.. |. +++.++++++..+- |++..|-.+.-..+ ..-
T Consensus 92 NvvA---v~dl~ea~~dADilvf~v--Ph--------------Qf~~~ic~~l~g~vk~~~~aISL~KG~e~~~~g~~i~ 152 (372)
T KOG2711|consen 92 NVVA---VPDLVEAAKDADILVFVV--PH--------------QFIPRICEQLKGYVKPGATAISLIKGVEVGEEGPGIR 152 (372)
T ss_pred CeEe---cchHHHHhccCCEEEEeC--Ch--------------hhHHHHHHHHhcccCCCCeEEEeecceeccCCCCcee
Confidence 3332 468999999999999984 21 34456667776654 45554444322221 012
Q ss_pred HHHHHHHHhCCCCCC
Q 028437 154 IAAEVFKKAGTYNEK 168 (209)
Q Consensus 154 i~~~~~~~~~~~p~~ 168 (209)
+++++..+..++|-.
T Consensus 153 liS~iI~~~lgI~~~ 167 (372)
T KOG2711|consen 153 LISQIIHRALGIPCS 167 (372)
T ss_pred ehHHHHHHHhCCCce
Confidence 556666665555543
No 416
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.20 E-value=0.0095 Score=51.60 Aligned_cols=115 Identities=18% Similarity=0.171 Sum_probs=71.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCCCcceeEee-c----------CCchhhhcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINTRSEVAGYM-G----------NDQLGQALE 95 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~~~~v~~~~-~----------~~d~~~a~~ 95 (209)
..+.||||+..+|..++..|+.+|. +|++..|+.. .....++........+.... + .+.++....
T Consensus 36 ~~~vVTGansGIG~eta~~La~~Ga--~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALRGA--HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 4788999999999999999999997 9999999852 22233444421111111100 0 112233345
Q ss_pred CCCEEEEcCCCCCCCCC---C-hhHHHHHH----HHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 96 DSDVVIIPAGVPRKPGM---T-RDDLFNIN----AGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 96 ~aD~Vi~~ag~~~~~g~---~-r~~~~~~N----~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
.-|+.|+.||+...+.. + .+..+..| .-.+..+.+.+++..| .+||++|.
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~-~RIV~vsS 171 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP-SRIVNVSS 171 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC-CCEEEEcC
Confidence 77999999998653332 1 11223344 3456677777776656 78888865
No 417
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.20 E-value=0.0031 Score=55.48 Aligned_cols=114 Identities=18% Similarity=0.146 Sum_probs=66.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hh--H---HHh-hc--CCCCCcceeEeec----------CC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PG--V---AAD-VG--HINTRSEVAGYMG----------ND 88 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~--~---~~d-l~--~~~~~~~v~~~~~----------~~ 88 (209)
++|.+||||||+|..++.+|+.+-.. +|++.-|-.. .+ . ..+ .. +.....+++.+.+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~-kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDA-KVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCC-cEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 37999999999999999999887653 6666655321 11 1 111 00 0111123333221 12
Q ss_pred chhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 89 QLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 89 d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
++.+-.++.|.|||++.... .-.+..++...|+..+.++++.+..--+.. ++++|
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp-~~yVS 134 (382)
T COG3320 80 TWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATGKPKP-LHYVS 134 (382)
T ss_pred HHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcCCCce-eEEEe
Confidence 34444567999999976432 112234566789999999999876532332 55554
No 418
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=97.19 E-value=0.0025 Score=58.45 Aligned_cols=69 Identities=16% Similarity=0.205 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCC----CCCcceeEeecCCchhhhcC---CCCE
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHI----NTRSEVAGYMGNDQLGQALE---DSDV 99 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~----~~~~~v~~~~~~~d~~~a~~---~aD~ 99 (209)
++++|.++|- |.+|.+++..|+..|+ +|.++|+++.+ ..++.+. ... .+.. ..+++++.+ .+|+
T Consensus 5 ~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k--~~~l~~~~~~~Ga~-~~~~---a~s~~e~v~~l~~~dv 75 (493)
T PLN02350 5 ALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSK--VDETVERAKKEGNL-PLYG---FKDPEDFVLSIQKPRS 75 (493)
T ss_pred CCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHH--HHHHHHhhhhcCCc-cccc---CCCHHHHHhcCCCCCE
Confidence 4468999998 9999999999999999 99999997532 2222221 110 1111 234555555 4999
Q ss_pred EEEcC
Q 028437 100 VIIPA 104 (209)
Q Consensus 100 Vi~~a 104 (209)
||.+.
T Consensus 76 Ii~~v 80 (493)
T PLN02350 76 VIILV 80 (493)
T ss_pred EEEEC
Confidence 99985
No 419
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.19 E-value=0.0034 Score=51.31 Aligned_cols=33 Identities=33% Similarity=0.596 Sum_probs=30.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
.||+|+|+ |.+|+.++..|+..|. ++++++|.|
T Consensus 29 ~~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D 61 (212)
T PRK08644 29 AKVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFD 61 (212)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence 48999999 9999999999999997 589999997
No 420
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=97.19 E-value=0.0051 Score=53.10 Aligned_cols=97 Identities=20% Similarity=0.286 Sum_probs=62.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCC-----Cc--ceeEeecCCchhhhcCCCCEEE
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINT-----RS--EVAGYMGNDQLGQALEDSDVVI 101 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~-----~~--~v~~~~~~~d~~~a~~~aD~Vi 101 (209)
|||+|+|+ |-+|+-++..|.+.|. +|.++.+++. ...+..... .. ..... .+.+ .+....+|+||
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~---~~~l~~~GL~i~~~~~~~~~~~~-~~~~-~~~~~~~Dlvi 72 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRR---LEALKKKGLRIEDEGGNFTTPVV-AATD-AEALGPADLVI 72 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHH---HHHHHhCCeEEecCCCccccccc-cccC-hhhcCCCCEEE
Confidence 69999999 9999999999999996 8888888642 112222110 00 01111 1122 45667999999
Q ss_pred EcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCC
Q 028437 102 IPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISNPVN 149 (209)
Q Consensus 102 ~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~snP~~ 149 (209)
++.-..+ ..+.++.+..+. ++.+++..=|-.+
T Consensus 73 v~vKa~q----------------~~~al~~l~~~~~~~t~vl~lqNG~g 105 (307)
T COG1893 73 VTVKAYQ----------------LEEALPSLAPLLGPNTVVLFLQNGLG 105 (307)
T ss_pred EEecccc----------------HHHHHHHhhhcCCCCcEEEEEeCCCc
Confidence 9953221 245556666665 5667888888877
No 421
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=97.18 E-value=0.0027 Score=53.90 Aligned_cols=101 Identities=25% Similarity=0.348 Sum_probs=69.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC----CCc-----cEEEEEecCCc--------hhHHHhhcCCCCCcceeEeecCCch
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLN----PLV-----SRLALYDIANT--------PGVAADVGHINTRSEVAGYMGNDQL 90 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~----g~~-----~ev~l~D~~~~--------~~~~~dl~~~~~~~~v~~~~~~~d~ 90 (209)
..||++.|| |..|..++..|... |+- .+++++|++-. .....++.+.. .. . ...++
T Consensus 25 d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~--~~-~---~~~~L 97 (279)
T cd05312 25 DQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD--EE-K---EGKSL 97 (279)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc--Cc-c---cCCCH
Confidence 359999999 99999998877654 652 58999999631 11111122211 00 0 12478
Q ss_pred hhhcC--CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 91 GQALE--DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 91 ~~a~~--~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
+++++ ++|++|=+.+.+ | -+.+++++.|.++++..+|.-.|||..
T Consensus 98 ~e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 98 LEVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred HHHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 99999 889998876543 2 234788899999998888888899975
No 422
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.16 E-value=0.028 Score=46.70 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=29.3
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAA--GGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGas--G~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
+.++|+||+ +.+|..++..|++.|. +|++.+++
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~--~v~~~~r~ 42 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGA--KLVFTYAG 42 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEecCc
Confidence 478999996 7999999999999998 99998764
No 423
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.0097 Score=49.26 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=27.9
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEec
Q 028437 29 RKVAVLGAAG--GIGQPLALLMKLNPLVSRLALYDI 62 (209)
Q Consensus 29 ~kI~IiGasG--~vG~~la~~L~~~g~~~ev~l~D~ 62 (209)
++|+|+||+| .+|.+++..|++.|. +|++.++
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G~--~vi~~~~ 40 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAGA--DIFFTYW 40 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEec
Confidence 4899999974 799999999999998 8888753
No 424
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.16 E-value=0.0025 Score=55.42 Aligned_cols=66 Identities=23% Similarity=0.337 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..+++.|+|. |.||+.++..|..-|. +|..||+........ .... .. ..++++.++.||+|++...
T Consensus 141 ~gkTvGIiG~-G~IG~~va~~l~afgm--~v~~~d~~~~~~~~~--~~~~-----~~---~~~Ld~lL~~sDiv~lh~P 206 (324)
T COG0111 141 AGKTVGIIGL-GRIGRAVAKRLKAFGM--KVIGYDPYSPRERAG--VDGV-----VG---VDSLDELLAEADILTLHLP 206 (324)
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEECCCCchhhhc--cccc-----ee---cccHHHHHhhCCEEEEcCC
Confidence 3469999999 9999999999999999 999999943211111 1110 00 1357888999999998753
No 425
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.15 E-value=0.035 Score=46.62 Aligned_cols=113 Identities=12% Similarity=0.126 Sum_probs=64.9
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCC-C----CCcceeEeecCCch-------hhh
Q 028437 29 RKVAVLGAA--GGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHI-N----TRSEVAGYMGNDQL-------GQA 93 (209)
Q Consensus 29 ~kI~IiGas--G~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~-~----~~~~v~~~~~~~d~-------~~a 93 (209)
+.++|+||+ +.+|..++..|++.|. +|++.+++.. .....++... . ...++.. .++. .+.
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~--~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~---~~~v~~~~~~~~~~ 85 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGA--ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD---EASIDAVFETLEKK 85 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC---HHHHHHHHHHHHHh
Confidence 479999996 6899999999999999 9988877521 1112222111 1 0111111 1112 222
Q ss_pred cCCCCEEEEcCCCCCC-----C--CCC---hhHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 94 LEDSDVVIIPAGVPRK-----P--GMT---RDDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 94 ~~~aD~Vi~~ag~~~~-----~--g~~---r~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
+...|++|+.||.... + ..+ ....+..|+.....+.+.+.+.- ..+.++++|.
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss 149 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTY 149 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 3467999999987531 1 122 23345677766666666555432 2466776664
No 426
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=97.15 E-value=0.0033 Score=52.83 Aligned_cols=60 Identities=12% Similarity=0.229 Sum_probs=42.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCc--cEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLV--SRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~--~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
|||+|+|+ |.+|++++..|.+.+.. .+++.+|+++.. + . ... ..+..++++++|+||++.
T Consensus 4 mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~---~----~~~---~~~~~~~~~~~D~Vilav 65 (260)
T PTZ00431 4 IRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T---P----FVY---LQSNEELAKTCDIIVLAV 65 (260)
T ss_pred CEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C---C----eEE---eCChHHHHHhCCEEEEEe
Confidence 69999999 99999999999988742 258888875321 1 0 111 123456678999999984
No 427
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.15 E-value=0.01 Score=49.95 Aligned_cols=116 Identities=14% Similarity=0.119 Sum_probs=63.9
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCC-CCCccee-EeecCCchh-------hhcCC
Q 028437 29 RKVAVLGAA--GGIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHI-NTRSEVA-GYMGNDQLG-------QALED 96 (209)
Q Consensus 29 ~kI~IiGas--G~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~-~~~~~v~-~~~~~~d~~-------~a~~~ 96 (209)
+.++|+||+ +.+|..++..|++.|. +|++.+++.. .....++... .....+. ++...++.+ +.+..
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGA--ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 6899999999999998 9999998631 1111222111 1000010 011111111 22356
Q ss_pred CCEEEEcCCCCCC-----C--CCCh---hHHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 028437 97 SDVVIIPAGVPRK-----P--GMTR---DDLFNINAGIVKDLCSAIAKYC-PNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~-----~--g~~r---~~~~~~N~~~~~~i~~~i~~~~-p~~~viv~sn 146 (209)
.|++|+.||.... + ..+. ...+..|+.....+.+.+...- ..+.|+++|.
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS 144 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY 144 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence 7999999997421 1 1222 2346677665555554444322 2456777653
No 428
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.14 E-value=0.0036 Score=54.50 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=46.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.++|+|+|. |.+|.+++..|...|+ +|++.+++....... ...... .. .+.++++++||+|+++.
T Consensus 17 gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~~~-A~~~G~----~~----~s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 17 GKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSWKK-AEADGF----EV----LTVAEAAKWADVIMILL 81 (330)
T ss_pred CCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhHHH-HHHCCC----ee----CCHHHHHhcCCEEEEcC
Confidence 358999999 9999999999999998 888887753211111 111111 11 25678899999999995
No 429
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.14 E-value=0.0023 Score=46.57 Aligned_cols=95 Identities=18% Similarity=0.222 Sum_probs=57.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeE-eecCCch-hhhcCCCCEEEEcCCCCC
Q 028437 31 VAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAG-YMGNDQL-GQALEDSDVVIIPAGVPR 108 (209)
Q Consensus 31 I~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~-~~~~~d~-~~a~~~aD~Vi~~ag~~~ 108 (209)
|.|+|. |.+|..++..|.+.+. +++++|.++.. ...+...... .+.+ ......+ +..+++||.|+.+.+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~--~vvvid~d~~~--~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~-- 72 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGI--DVVVIDRDPER--VEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDD-- 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS--EEEEEESSHHH--HHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSS--
T ss_pred eEEEcC-CHHHHHHHHHHHhCCC--EEEEEECCcHH--HHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCC--
Confidence 679999 9999999999999776 99999998532 2222222211 1111 0000112 2346789999998531
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 028437 109 KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISN 146 (209)
Q Consensus 109 ~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~sn 146 (209)
-..| ..++..+++.+|+.+++...+
T Consensus 73 ---------d~~n----~~~~~~~r~~~~~~~ii~~~~ 97 (116)
T PF02254_consen 73 ---------DEEN----LLIALLARELNPDIRIIARVN 97 (116)
T ss_dssp ---------HHHH----HHHHHHHHHHTTTSEEEEEES
T ss_pred ---------HHHH----HHHHHHHHHHCCCCeEEEEEC
Confidence 1344 355566677788776665554
No 430
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.13 E-value=0.0015 Score=51.10 Aligned_cols=69 Identities=25% Similarity=0.418 Sum_probs=44.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+..-++++|+|- |.+|+.+|..|...|. .|.++|+||......-+... .+ .+++++++.+|++|.+.
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga--~V~V~e~DPi~alqA~~dGf----~v------~~~~~a~~~adi~vtaT 86 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGA--RVTVTEIDPIRALQAAMDGF----EV------MTLEEALRDADIFVTAT 86 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT---EEEEE-SSHHHHHHHHHTT-----EE------E-HHHHTTT-SEEEE-S
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCC--EEEEEECChHHHHHhhhcCc----Ee------cCHHHHHhhCCEEEECC
Confidence 334458999999 9999999999999998 99999999743322212111 11 24688999999999886
Q ss_pred CC
Q 028437 105 GV 106 (209)
Q Consensus 105 g~ 106 (209)
|.
T Consensus 87 G~ 88 (162)
T PF00670_consen 87 GN 88 (162)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 431
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.12 E-value=0.025 Score=47.34 Aligned_cols=116 Identities=15% Similarity=0.157 Sum_probs=62.6
Q ss_pred CeEEEEcCCC--chHHHHHHHHHhCCCccEEEEEecCCc-hhHHHhhcCCCCCc-cee-EeecCCchhh-------hcCC
Q 028437 29 RKVAVLGAAG--GIGQPLALLMKLNPLVSRLALYDIANT-PGVAADVGHINTRS-EVA-GYMGNDQLGQ-------ALED 96 (209)
Q Consensus 29 ~kI~IiGasG--~vG~~la~~L~~~g~~~ev~l~D~~~~-~~~~~dl~~~~~~~-~v~-~~~~~~d~~~-------a~~~ 96 (209)
+.++|+||++ .+|..++..|++.|. .|++.+++.. .....++....... .+. ++...++.++ .+..
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 4789999964 799999999999998 8999888531 12223332211000 000 0111112222 2345
Q ss_pred CCEEEEcCCCCCCC--------CCChh---HHHHHHHHHHHHHHHHHHhh-CCCeEEEEecC
Q 028437 97 SDVVIIPAGVPRKP--------GMTRD---DLFNINAGIVKDLCSAIAKY-CPNAIVNMISN 146 (209)
Q Consensus 97 aD~Vi~~ag~~~~~--------g~~r~---~~~~~N~~~~~~i~~~i~~~-~p~~~viv~sn 146 (209)
.|++|++||..... ..+.+ ..+..|+.....+.+.+... .+.+.++++|.
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss 146 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY 146 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 79999999864311 11222 23455665444444443322 23466777764
No 432
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.12 E-value=0.0024 Score=59.34 Aligned_cols=94 Identities=12% Similarity=0.191 Sum_probs=59.3
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCc---hh-hhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQ---LG-QALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d---~~-~a~~~aD~Vi~~a 104 (209)
.+|.|+|+ |.+|+.++..|.++|+ +++++|.|+. ...++.+.+... +.+ +.+| ++ .-++++|.++.+.
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~--~vvvId~d~~--~~~~~~~~g~~~-i~G--D~~~~~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGI--PLVVIETSRT--RVDELRERGIRA-VLG--NAANEEIMQLAHLDCARWLLLTI 489 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCC--CEEEEECCHH--HHHHHHHCCCeE-EEc--CCCCHHHHHhcCccccCEEEEEc
Confidence 58999999 9999999999999999 9999999853 233333332211 111 1122 22 2356889888874
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
+.. .+|. +++..+++.+|+.+++.-.
T Consensus 490 ~~~-----------~~~~----~iv~~~~~~~~~~~iiar~ 515 (558)
T PRK10669 490 PNG-----------YEAG----EIVASAREKRPDIEIIARA 515 (558)
T ss_pred CCh-----------HHHH----HHHHHHHHHCCCCeEEEEE
Confidence 211 2333 3445556667887666554
No 433
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.12 E-value=0.0013 Score=57.14 Aligned_cols=74 Identities=27% Similarity=0.303 Sum_probs=45.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCC--cceeEeecCCchhh-hcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTR--SEVAGYMGNDQLGQ-ALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~--~~v~~~~~~~d~~~-a~~~aD~Vi~~a 104 (209)
|+||+|+||+|+.|..|...|.....+ |+.++...+..++...-.+.... ..+... +.|.++ ..++||+||.+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFlal 78 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLAL 78 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEec
Confidence 679999999999999999999998765 68888765433322211222111 111111 112233 355699999984
No 434
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.12 E-value=0.0028 Score=58.59 Aligned_cols=68 Identities=22% Similarity=0.333 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.-..++|+|+|. |.+|+.++..|...|. +|+.+|+........++ . +.. .++++.+++||+|+.+.
T Consensus 137 ~l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~----~~l~ell~~aDiV~l~l 202 (526)
T PRK13581 137 ELYGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQL---G----VEL----VSLDELLARADFITLHT 202 (526)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc---C----CEE----EcHHHHHhhCCEEEEcc
Confidence 344569999999 9999999999999998 99999985322221111 1 111 14788899999999986
Q ss_pred CC
Q 028437 105 GV 106 (209)
Q Consensus 105 g~ 106 (209)
..
T Consensus 203 P~ 204 (526)
T PRK13581 203 PL 204 (526)
T ss_pred CC
Confidence 43
No 435
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.11 E-value=0.003 Score=51.17 Aligned_cols=33 Identities=30% Similarity=0.570 Sum_probs=30.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
.||+|+|+ |.+|+.++..|+..|. ++++++|.+
T Consensus 22 ~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d 54 (202)
T TIGR02356 22 SHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDD 54 (202)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCC
Confidence 48999999 9999999999999996 699999997
No 436
>PLN03139 formate dehydrogenase; Provisional
Probab=97.10 E-value=0.006 Score=54.32 Aligned_cols=67 Identities=24% Similarity=0.260 Sum_probs=48.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
-..++|+|+|. |.||+.++..|..-|. +|..+|+........ .+.. +.. ..++++.+++||+|+++.
T Consensus 197 L~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~g----~~~---~~~l~ell~~sDvV~l~l 263 (386)
T PLN03139 197 LEGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KETG----AKF---EEDLDAMLPKCDVVVINT 263 (386)
T ss_pred CCCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhcC----cee---cCCHHHHHhhCCEEEEeC
Confidence 44569999999 9999999999998888 999999864211111 1111 111 136788999999999985
No 437
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.10 E-value=0.0063 Score=52.53 Aligned_cols=98 Identities=21% Similarity=0.353 Sum_probs=62.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+.++|+|+|+ |.+|..++..|...|. .+|.++++++.+. .+..+.. .... .+++++++.++|+||.+.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~-~~V~v~~r~~~ra~~la~~~g~-----~~~~---~~~~~~~l~~aDvVi~at 246 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGV-AEITIANRTYERAEELAKELGG-----NAVP---LDELLELLNEADVVISAT 246 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHcCC-----eEEe---HHHHHHHHhcCCEEEECC
Confidence 4569999999 9999999998887653 3899999975322 2222221 1111 135677889999999998
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHH-HHhh-CCCeEEEEecCCCCC
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSA-IAKY-CPNAIVNMISNPVNS 150 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~-i~~~-~p~~~viv~snP~~~ 150 (209)
+.+.. .++.+. ++.. .+...++=+++|-+.
T Consensus 247 ~~~~~----------------~~~~~~~~~~~~~~~~~viDlavPrdi 278 (311)
T cd05213 247 GAPHY----------------AKIVERAMKKRSGKPRLIVDLAVPRDI 278 (311)
T ss_pred CCCch----------------HHHHHHHHhhCCCCCeEEEEeCCCCCC
Confidence 76531 111122 2211 245678888999883
No 438
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.09 E-value=0.0041 Score=51.48 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=29.1
Q ss_pred eEEEEcCCCchHHHHHHHHHh----CCCccEEEEEecCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKL----NPLVSRLALYDIAN 64 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~----~g~~~ev~l~D~~~ 64 (209)
.++|+||++.+|..++..|++ .|. .|++.++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~--~V~~~~r~~ 38 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS--VLVLSARND 38 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc--EEEEEEcCH
Confidence 478999999999999999986 677 999999874
No 439
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.09 E-value=0.084 Score=43.89 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=28.5
Q ss_pred CeEEEEcC--CCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGA--AGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGa--sG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
+.++|+|| ++.+|..++..|++.|. +|++.+++
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~--~v~~~~~~ 41 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGA--ELAFTYVV 41 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCc
Confidence 47999996 56899999999999998 88887664
No 440
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=97.08 E-value=0.005 Score=53.30 Aligned_cols=56 Identities=9% Similarity=0.057 Sum_probs=39.1
Q ss_pred hHHHHHHHHHhCCCccEEEEEecCCch---hHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 40 IGQPLALLMKLNPLVSRLALYDIANTP---GVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 40 vG~~la~~L~~~g~~~ev~l~D~~~~~---~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
-|+++|..|++.|+ +|+++|+++.. .....+.+... .. .++..++.+++|+||.+.
T Consensus 31 gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaGA----~~---AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 31 GGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAGV----KV---VSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred CHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCCC----ee---cCCHHHHHhCCCEEEEec
Confidence 48899999999999 99999986421 12223443321 11 235678999999999995
No 441
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.07 E-value=0.0086 Score=48.45 Aligned_cols=147 Identities=22% Similarity=0.264 Sum_probs=85.9
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCC----CCcceeEeecC----CchhhhcCCCCE
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHIN----TRSEVAGYMGN----DQLGQALEDSDV 99 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~----~~~~v~~~~~~----~d~~~a~~~aD~ 99 (209)
...|+|++..||++++..|...|. .|...|.+.. ++.+.+|.... +.+++..-.+. +..++.+---++
T Consensus 16 ~~~vtGg~sGIGrAia~~la~~Ga--rv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 16 VAAVTGGSSGIGRAIAQLLAKKGA--RVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred eeEEecCCchHHHHHHHHHHhcCc--EEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 677999988999999999999999 9999999853 33445555432 22222211000 112233445699
Q ss_pred EEEcCCCCCCCC------CChhHHHHHHHHHHHHHHHHHHh----hC-CCeEEEEecCCCCCcHHHHHHHHHHhCCC--C
Q 028437 100 VIIPAGVPRKPG------MTRDDLFNINAGIVKDLCSAIAK----YC-PNAIVNMISNPVNSTVPIAAEVFKKAGTY--N 166 (209)
Q Consensus 100 Vi~~ag~~~~~g------~~r~~~~~~N~~~~~~i~~~i~~----~~-p~~~viv~snP~~~~~~i~~~~~~~~~~~--p 166 (209)
+|+|||..+..- .+..+.+..|+..+-.+.++..+ .. ....||++|.-++. +.-.-+ ++| .
T Consensus 94 lVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk----iGN~GQ--tnYAAs 167 (256)
T KOG1200|consen 94 LVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK----IGNFGQ--TNYAAS 167 (256)
T ss_pred EEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc----cccccc--hhhhhh
Confidence 999999876432 13455677787665544444333 22 33478888866652 211111 012 2
Q ss_pred CCcEEEEehhhHHHHHHHHHHH
Q 028437 167 EKKLFGVTTLDVVRAKTFYAGK 188 (209)
Q Consensus 167 ~~~vig~~~lds~r~~~~la~~ 188 (209)
+.-+||++.- +.+.+|++
T Consensus 168 K~GvIgftkt----aArEla~k 185 (256)
T KOG1200|consen 168 KGGVIGFTKT----AARELARK 185 (256)
T ss_pred cCceeeeeHH----HHHHHhhc
Confidence 4458898752 23556554
No 442
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=97.07 E-value=0.0062 Score=55.22 Aligned_cols=126 Identities=16% Similarity=0.254 Sum_probs=70.3
Q ss_pred CCCCCeEEEEcCCCchHHH-HHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEc
Q 028437 25 SVPDRKVAVLGAAGGIGQP-LALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~-la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ 103 (209)
+.+.++|.|+|. |..|.+ ++..|.+.|+ +|.+.|.+... ...+|.... +..+. ..+ .+.++++|+||.+
T Consensus 4 ~~~~~~v~viG~-G~sG~s~~a~~L~~~G~--~V~~~D~~~~~-~~~~l~~~g----i~~~~-~~~-~~~~~~~d~vv~s 73 (461)
T PRK00421 4 LRRIKRIHFVGI-GGIGMSGLAEVLLNLGY--KVSGSDLKESA-VTQRLLELG----AIIFI-GHD-AENIKDADVVVYS 73 (461)
T ss_pred cCCCCEEEEEEE-chhhHHHHHHHHHhCCC--eEEEECCCCCh-HHHHHHHCC----CEEeC-CCC-HHHCCCCCEEEEC
Confidence 344568999999 999999 7999999999 99999986432 222343322 11111 112 3557789999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC--CcHHHHHHHHHHh
Q 028437 104 AGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN--STVPIAAEVFKKA 162 (209)
Q Consensus 104 ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~--~~~~i~~~~~~~~ 162 (209)
-|.+...-. .......+++++.+. +.+.+..++.++|-+|...+ +++.++..+++..
T Consensus 74 pgi~~~~~~-~~~a~~~~i~i~~~~-e~~~~~~~~~~~I~ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 74 SAIPDDNPE-LVAARELGIPVVRRA-EMLAELMRFRTSIAVAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCCCCCCHH-HHHHHHCCCcEEeHH-HHHHHHHccCcEEEEECCCCHHHHHHHHHHHHHhc
Confidence 888742110 111112233332221 11222222224566665543 2346666666554
No 443
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.06 E-value=0.024 Score=47.14 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=28.3
Q ss_pred CeEEEEcCC--CchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAA--GGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGas--G~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
+.++|+||+ +.+|..++..|++.|. +|++.+++
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~--~v~~~~~~ 41 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGA--ELGITYLP 41 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEEecC
Confidence 478999985 6899999999999998 88887653
No 444
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.06 E-value=0.0041 Score=56.58 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
...+|+|+|. |.+|+.++..|...|. +|+++|+++....... .+ .+ .. .+++++++++|+|+.+.|.
T Consensus 253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~-~~-G~----~~----~~leell~~ADIVI~atGt 319 (476)
T PTZ00075 253 AGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAA-ME-GY----QV----VTLEDVVETADIFVTATGN 319 (476)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHH-hc-Cc----ee----ccHHHHHhcCCEEEECCCc
Confidence 3459999999 9999999999999998 9999988763221111 11 11 11 2467889999999998764
No 445
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=97.05 E-value=0.0028 Score=54.10 Aligned_cols=68 Identities=24% Similarity=0.412 Sum_probs=52.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
.++|..||- |.+|++++..|+..|| .|++||++.. ...++.+.... +. .++.|..+++|+||.+.+.+
T Consensus 35 ~~~iGFIGL-G~MG~~M~~nLik~G~--kVtV~dr~~~--k~~~f~~~Ga~--v~-----~sPaeVae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 35 KTRIGFIGL-GNMGSAMVSNLIKAGY--KVTVYDRTKD--KCKEFQEAGAR--VA-----NSPAEVAEDSDVVITMVPNP 102 (327)
T ss_pred cceeeEEee-ccchHHHHHHHHHcCC--EEEEEeCcHH--HHHHHHHhchh--hh-----CCHHHHHhhcCEEEEEcCCh
Confidence 479999998 9999999999999999 9999999742 44455555421 11 24578889999999987643
No 446
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=97.05 E-value=0.015 Score=55.71 Aligned_cols=69 Identities=20% Similarity=0.299 Sum_probs=47.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
.||+|+|+ |.+|..++..|.+.|+..+|+++|+++... ....+.... .. ..++++++++++|+||++..
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~--~~a~~~g~~--~~---~~~~~~~~~~~aDvVilavp 72 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSL--ELAVSLGVI--DR---GEEDLAEAVSGADVIVLAVP 72 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHH--HHHHHCCCC--Cc---ccCCHHHHhcCCCEEEECCC
Confidence 58999998 999999999999988433899999975321 111111110 00 12356778899999999863
No 447
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=97.05 E-value=0.0058 Score=51.55 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=44.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCC-CccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g-~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
||||+|+|. |.+|..++..+.+.+ ...-+.++|+++.. ..++.+. .. ...+ +++++.+.++|+|++++.
T Consensus 1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~-~~--~~~~---~~~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASK-TG--AKAC---LSIDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHh-cC--CeeE---CCHHHHhcCCCEEEEcCC
Confidence 469999999 999999999888764 22235577876422 2222221 11 1111 356676789999999974
No 448
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.04 E-value=0.0041 Score=54.04 Aligned_cols=66 Identities=20% Similarity=0.200 Sum_probs=46.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHH-hCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMK-LNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~-~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
-..++++|+|. |.||+.++..+. .-|. +|..+|+........+.. ... .++++.+++||+|++..
T Consensus 143 L~gktvGIiG~-G~IG~~va~~l~~~fgm--~V~~~~~~~~~~~~~~~~-------~~~----~~l~ell~~sDvv~lh~ 208 (323)
T PRK15409 143 VHHKTLGIVGM-GRIGMALAQRAHFGFNM--PILYNARRHHKEAEERFN-------ARY----CDLDTLLQESDFVCIIL 208 (323)
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHhcCCC--EEEEECCCCchhhHHhcC-------cEe----cCHHHHHHhCCEEEEeC
Confidence 34469999999 999999999887 6677 999888753211111111 111 25788999999999985
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
.
T Consensus 209 p 209 (323)
T PRK15409 209 P 209 (323)
T ss_pred C
Confidence 4
No 449
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=97.03 E-value=0.0038 Score=53.12 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=44.9
Q ss_pred EEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 33 VLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 33 IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
++|. |.+|..++..|+..|+ +|.++|+++. ...++..... .. +.+..++++++|+||++..
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~--~~~~l~~~g~----~~---~~s~~~~~~~advVil~vp 61 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPD--AVEEAVAAGA----QA---AASPAEAAEGADRVITMLP 61 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHH--HHHHHHHcCC----ee---cCCHHHHHhcCCEEEEeCC
Confidence 4788 9999999999999999 9999999753 2223332221 11 2356788999999999964
No 450
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=97.02 E-value=0.0087 Score=53.70 Aligned_cols=66 Identities=17% Similarity=0.234 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
.-.+|+|+|+ |.+|..++..+...|. +|+++|+++.+. .+..+ .+ .. .+.+++++++|+||.+.|
T Consensus 201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~~---G~----~~----~~~~e~v~~aDVVI~atG 266 (413)
T cd00401 201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAME---GY----EV----MTMEEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHhc---CC----EE----ccHHHHHcCCCEEEECCC
Confidence 3469999999 9999999999999998 899999976322 22211 11 11 124577889999999875
Q ss_pred C
Q 028437 106 V 106 (209)
Q Consensus 106 ~ 106 (209)
.
T Consensus 267 ~ 267 (413)
T cd00401 267 N 267 (413)
T ss_pred C
Confidence 3
No 451
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=97.02 E-value=0.00074 Score=56.55 Aligned_cols=99 Identities=21% Similarity=0.246 Sum_probs=69.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC----CC-----ccEEEEEecCCc----h----hHHHh---hcCCCCCcceeEeecC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLN----PL-----VSRLALYDIANT----P----GVAAD---VGHINTRSEVAGYMGN 87 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~----g~-----~~ev~l~D~~~~----~----~~~~d---l~~~~~~~~v~~~~~~ 87 (209)
..||++.|| |..|..++..|.+. |+ -++++++|++-+ . ..... +.+.. . ..
T Consensus 25 d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~-----~---~~ 95 (254)
T cd00762 25 EHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPE-----R---ES 95 (254)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcc-----c---cc
Confidence 359999999 99999999877654 33 138999999631 0 00111 11110 0 12
Q ss_pred CchhhhcC--CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 88 DQLGQALE--DSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 88 ~d~~~a~~--~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
.++.++++ +.|++|=+.+.+ | -+++++++.|.++++..+|.-.|||..
T Consensus 96 ~~L~eav~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~ 145 (254)
T cd00762 96 GDLEDAVEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEINERPVIFALSNPTS 145 (254)
T ss_pred CCHHHHHHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcCCCCEEEECCCcCC
Confidence 47899999 999998876644 2 244788899999998888888899976
No 452
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.02 E-value=0.0043 Score=54.29 Aligned_cols=74 Identities=19% Similarity=0.331 Sum_probs=49.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc-----hh--------------H----HHhhcCCCCCcceeEee
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT-----PG--------------V----AADVGHINTRSEVAGYM 85 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~-----~~--------------~----~~dl~~~~~~~~v~~~~ 85 (209)
.||+|+|+ |.+|+.++..|+..|+ +++.++|.|.. .. + ...+........+..+.
T Consensus 25 ~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 25 KHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 38999999 9999999999999996 69999999731 00 0 11222222222333332
Q ss_pred c---CCchhhhcCCCCEEEEcC
Q 028437 86 G---NDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 86 ~---~~d~~~a~~~aD~Vi~~a 104 (209)
. .+++++.++++|+||.+.
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~ 124 (338)
T PRK12475 103 TDVTVEELEELVKEVDLIIDAT 124 (338)
T ss_pred ccCCHHHHHHHhcCCCEEEEcC
Confidence 1 134567789999999984
No 453
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.01 E-value=0.0053 Score=55.28 Aligned_cols=124 Identities=23% Similarity=0.322 Sum_probs=70.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh---HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG---VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~---~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.++|+|+|+ |.+|..++..|+..|+ +|+++|++.... ...++.... +..+.. ....+...++|+||.++
T Consensus 5 ~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~~----~~~~~~-~~~~~~~~~~d~vv~~~ 76 (450)
T PRK14106 5 GKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGELG----IELVLG-EYPEEFLEGVDLVVVSP 76 (450)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC----CEEEeC-CcchhHhhcCCEEEECC
Confidence 358999999 8899999999999999 999999964211 122332211 111111 11124457899999998
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCC--cHHHHHHHHHHh
Q 028437 105 GVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS--TVPIAAEVFKKA 162 (209)
Q Consensus 105 g~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~--~~~i~~~~~~~~ 162 (209)
|.+.... .....-+.++++...+....+. .+ .++|-+|...+= ++.+++.++...
T Consensus 77 g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~-~~-~~vI~ITGS~GKTTt~~~l~~iL~~~ 133 (450)
T PRK14106 77 GVPLDSP-PVVQAHKKGIEVIGEVELAYRF-SK-APIVAITGTNGKTTTTTLLGEIFKNA 133 (450)
T ss_pred CCCCCCH-HHHHHHHCCCcEEeHHHHHHhh-cC-CCEEEEeCCCchHHHHHHHHHHHHHc
Confidence 8643111 1111122344444444333322 22 456667666443 335666676553
No 454
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.00 E-value=0.0028 Score=50.48 Aligned_cols=112 Identities=21% Similarity=0.234 Sum_probs=68.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch-hHHHh-hcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP-GVAAD-VGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~-~~~~d-l~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.+|...|.||+|-.|+.+...+.+.+.++.|+++-|.+.. +...+ +.+ ...++.--+++.++.++.|+.+.+-
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q-----~~vDf~Kl~~~a~~~qg~dV~FcaL 91 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQ-----VEVDFSKLSQLATNEQGPDVLFCAL 91 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceeee-----EEechHHHHHHHhhhcCCceEEEee
Confidence 3468999999999999999999999999999999886321 00000 001 0011110124567788999999997
Q ss_pred CCCC-CCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 105 GVPR-KPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 105 g~~~-~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
|..+ +.|-+ .++...-+++...++..++.+-...+++.|
T Consensus 92 gTTRgkaGad--gfykvDhDyvl~~A~~AKe~Gck~fvLvSS 131 (238)
T KOG4039|consen 92 GTTRGKAGAD--GFYKVDHDYVLQLAQAAKEKGCKTFVLVSS 131 (238)
T ss_pred cccccccccC--ceEeechHHHHHHHHHHHhCCCeEEEEEec
Confidence 7655 22211 123333355566666666554344444444
No 455
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.00 E-value=0.031 Score=46.16 Aligned_cols=67 Identities=18% Similarity=0.205 Sum_probs=41.7
Q ss_pred cCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecC----CchhhhcCCCCEEEEcCCCCC
Q 028437 35 GAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGN----DQLGQALEDSDVVIIPAGVPR 108 (209)
Q Consensus 35 GasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~----~d~~~a~~~aD~Vi~~ag~~~ 108 (209)
.+||++|.+++..|+.+|+ +|++++++.. ........ ..+...... ..+.+.++++|+||++||+..
T Consensus 23 ~SSG~iG~aLA~~L~~~G~--~V~li~r~~~---~~~~~~~~--v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGH--EVTLVTTKTA---VKPEPHPN--LSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred ccchHHHHHHHHHHHhCCC--EEEEEECccc---ccCCCCCC--eEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 4579999999999999999 9999987421 00000001 111111111 123355678999999999863
No 456
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.00 E-value=0.012 Score=50.65 Aligned_cols=131 Identities=18% Similarity=0.280 Sum_probs=78.0
Q ss_pred ccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc--hhHHHhhcCCCC-------CcceeEeecC
Q 028437 17 GARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT--PGVAADVGHINT-------RSEVAGYMGN 87 (209)
Q Consensus 17 ~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~--~~~~~dl~~~~~-------~~~v~~~~~~ 87 (209)
..|+|+.+.++..+|+|+|++-.+|..++.++..+|. .|.+.-++.. .....+++.... ..++..+...
T Consensus 22 ~~~~~~~~~k~~~hi~itggS~glgl~la~e~~~~ga--~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v 99 (331)
T KOG1210|consen 22 DHRSFIVKPKPRRHILITGGSSGLGLALALECKREGA--DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSV 99 (331)
T ss_pred HHHhhhcccCccceEEEecCcchhhHHHHHHHHHccC--ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHH
Confidence 3577888888778999999999999999999999999 8888888631 111112221110 1122211100
Q ss_pred Cchhhhc----CCCCEEEEcCCCCC---CCCCChh---HHHHHH----HHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 028437 88 DQLGQAL----EDSDVVIIPAGVPR---KPGMTRD---DLFNIN----AGIVKDLCSAIAKYCPNAIVNMISNPVN 149 (209)
Q Consensus 88 ~d~~~a~----~~aD~Vi~~ag~~~---~~g~~r~---~~~~~N----~~~~~~i~~~i~~~~p~~~viv~snP~~ 149 (209)
++.-+.+ ---|.+|++||..- ..+.+.. ..+..| +-..++.+..+++.++.+++++++.-.+
T Consensus 100 ~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a 175 (331)
T KOG1210|consen 100 SKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA 175 (331)
T ss_pred HHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh
Confidence 1111222 24599999999752 1112222 223344 4455666777777677778887775443
No 457
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.97 E-value=0.0049 Score=53.91 Aligned_cols=34 Identities=21% Similarity=0.425 Sum_probs=31.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.||+|+|+ |.+|+.++..|+..|. ++|.++|.+.
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~ 58 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY 58 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence 48999999 9999999999999997 6999999973
No 458
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.97 E-value=0.011 Score=48.75 Aligned_cols=97 Identities=23% Similarity=0.355 Sum_probs=61.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCcc--EEEEEecCC----chh-----HHHhhcCCCCCcceeEeecCCchhhhcCCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVS--RLALYDIAN----TPG-----VAADVGHINTRSEVAGYMGNDQLGQALEDS 97 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~--ev~l~D~~~----~~~-----~~~dl~~~~~~~~v~~~~~~~d~~~a~~~a 97 (209)
+||+|+|| |.+|..++..|...|. + +|+++|++. ... ...++.+...... . ..+++++++++
T Consensus 26 ~rvlvlGA-GgAg~aiA~~L~~~G~-~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~~~ 98 (226)
T cd05311 26 VKIVINGA-GAAGIAIARLLLAAGA-KPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALKGA 98 (226)
T ss_pred CEEEEECc-hHHHHHHHHHHHHcCc-CcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHhcC
Confidence 59999999 9999999999998886 4 799999973 111 1111211110000 1 12566888999
Q ss_pred CEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 028437 98 DVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (209)
Q Consensus 98 D~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP~~~ 150 (209)
|++|.+.+ +|+- + .+.++.| ++..+++..+||...
T Consensus 99 dvlIgaT~----~G~~-------~----~~~l~~m---~~~~ivf~lsnP~~e 133 (226)
T cd05311 99 DVFIGVSR----PGVV-------K----KEMIKKM---AKDPIVFALANPVPE 133 (226)
T ss_pred CEEEeCCC----CCCC-------C----HHHHHhh---CCCCEEEEeCCCCCc
Confidence 99999865 2320 1 2333444 355566677899753
No 459
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.96 E-value=0.013 Score=52.67 Aligned_cols=36 Identities=28% Similarity=0.455 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
..+++|.|+|+ |.+|..++..|...|+ +++++|.++
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~--~v~vid~~~ 264 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGY--SVKLIERDP 264 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCH
Confidence 34579999999 9999999999999999 999999975
No 460
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.94 E-value=0.0067 Score=54.30 Aligned_cols=67 Identities=18% Similarity=0.202 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
...+|+|+|. |.+|..++..+...|. +|+++|+++....... .+ .+ .. .+++++++++|+||.+.|.
T Consensus 194 ~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A~-~~-G~----~v----~~leeal~~aDVVItaTG~ 260 (406)
T TIGR00936 194 AGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEAA-MD-GF----RV----MTMEEAAKIGDIFITATGN 260 (406)
T ss_pred CcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHHH-hc-CC----Ee----CCHHHHHhcCCEEEECCCC
Confidence 4469999999 9999999999998888 9999998863221111 11 11 11 1346788999999988664
No 461
>PLN02928 oxidoreductase family protein
Probab=96.94 E-value=0.005 Score=54.03 Aligned_cols=77 Identities=18% Similarity=0.203 Sum_probs=49.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhh--cCCCCCcceeEeecCCchhhhcCCCCEEEEc
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADV--GHINTRSEVAGYMGNDQLGQALEDSDVVIIP 103 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl--~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ 103 (209)
-..++|+|+|. |.||+.++..|..-|. +|..+|+.........+ ................++++.+++||+|+.+
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 34469999999 9999999999998898 99999985321111111 0000000000000123688999999999998
Q ss_pred CC
Q 028437 104 AG 105 (209)
Q Consensus 104 ag 105 (209)
..
T Consensus 234 lP 235 (347)
T PLN02928 234 CT 235 (347)
T ss_pred CC
Confidence 64
No 462
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.94 E-value=0.0032 Score=55.12 Aligned_cols=33 Identities=30% Similarity=0.367 Sum_probs=26.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEE-Ee
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLAL-YD 61 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l-~D 61 (209)
|+||+|+||+|++|..++..|...... +++. .+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~-elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEV-EIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEEC
Confidence 479999999999999999988876433 6544 54
No 463
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.93 E-value=0.069 Score=45.25 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=30.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
.+|+|+|+ |.+|+.++..|++.|. ++++++|.|
T Consensus 31 s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D 63 (268)
T PRK15116 31 AHICVVGI-GGVGSWAAEALARTGI-GAITLIDMD 63 (268)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCC
Confidence 48999999 9999999999999996 599999987
No 464
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.92 E-value=0.0045 Score=48.47 Aligned_cols=56 Identities=25% Similarity=0.468 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
+.++|+|+|.++.+|..++..|..++- .|.+.+.+ +.++++.+++||+||.++|.
T Consensus 35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G~ 89 (160)
T PF02882_consen 35 EGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVGK 89 (160)
T ss_dssp TT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SSS
T ss_pred CCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeecc
Confidence 446999999989999999999999987 77776542 12466778889999999887
Q ss_pred C
Q 028437 107 P 107 (209)
Q Consensus 107 ~ 107 (209)
+
T Consensus 90 ~ 90 (160)
T PF02882_consen 90 P 90 (160)
T ss_dssp T
T ss_pred c
Confidence 6
No 465
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.92 E-value=0.0016 Score=56.98 Aligned_cols=70 Identities=21% Similarity=0.390 Sum_probs=44.1
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCC-ccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPL-VSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~-~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
||+|+||+|++|..++..|.++++ ..++.++.+....+....+... .+... ..+ .++++++|+||+++|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~----~~~~~--~~~-~~~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGK----ELEVN--EAK-IESFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCe----eEEEE--eCC-hHHhcCCCEEEECCCH
Confidence 689999999999999999988766 2366666554322222222211 11111 112 2456899999999764
No 466
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.91 E-value=0.011 Score=44.93 Aligned_cols=32 Identities=28% Similarity=0.614 Sum_probs=29.8
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
||+|+|+ |.+|+.++..|+..|. +++.++|.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCC
Confidence 6899999 9999999999999997 689999987
No 467
>PLN00015 protochlorophyllide reductase
Probab=96.91 E-value=0.009 Score=51.09 Aligned_cols=112 Identities=16% Similarity=0.075 Sum_probs=64.1
Q ss_pred EEEcCCCchHHHHHHHHHhCC-CccEEEEEecCCchh--HHHhhcCCCCCcceeE----eecCCchhhh-------cCCC
Q 028437 32 AVLGAAGGIGQPLALLMKLNP-LVSRLALYDIANTPG--VAADVGHINTRSEVAG----YMGNDQLGQA-------LEDS 97 (209)
Q Consensus 32 ~IiGasG~vG~~la~~L~~~g-~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~----~~~~~d~~~a-------~~~a 97 (209)
+|+||++.+|..++..|++.| . .|++.+++.... ...++..... .+.. +...++.+++ ....
T Consensus 1 lITGas~GIG~aia~~l~~~G~~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 76 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW--HVVMACRDFLKAERAAKSAGMPKD--SYTVMHLDLASLDSVRQFVDNFRRSGRPL 76 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHhcCCCC--eEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 489999999999999999999 7 899998864211 2223322111 1111 1111112222 2457
Q ss_pred CEEEEcCCCCCC----CCCCh---hHHHHHHHHH----HHHHHHHHHhhCC-CeEEEEecCC
Q 028437 98 DVVIIPAGVPRK----PGMTR---DDLFNINAGI----VKDLCSAIAKYCP-NAIVNMISNP 147 (209)
Q Consensus 98 D~Vi~~ag~~~~----~g~~r---~~~~~~N~~~----~~~i~~~i~~~~p-~~~viv~snP 147 (209)
|++|+.||.... ...+. ...+..|+.. ++.+++.+.+... .++||++|.-
T Consensus 77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~ 138 (308)
T PLN00015 77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSI 138 (308)
T ss_pred CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecc
Confidence 999999987421 11222 2345666654 5555666654321 4677777643
No 468
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.90 E-value=0.0029 Score=54.38 Aligned_cols=55 Identities=18% Similarity=0.376 Sum_probs=45.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
.++|+|+|.+|.+|..++..|++.|. +|+++++.. .++++..++||+||.+.|.+
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsavg~~ 213 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAVGRP 213 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecCCh
Confidence 36999999977999999999999998 999997631 13567788899999998765
No 469
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.90 E-value=0.0038 Score=52.41 Aligned_cols=66 Identities=36% Similarity=0.419 Sum_probs=43.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC-CCccEEE-EEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLN-PLVSRLA-LYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~-g~~~ev~-l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+|||+|+|++|.+|+.++..+.+. ++ +++ ++|+++..... .... .+.. .+|+++.++++|+||.+.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~--elvav~d~~~~~~~~--~~~~----~i~~---~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDL--ELVAAVDRPGSPLVG--QGAL----GVAI---TDDLEAVLADADVLIDFT 68 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCC--EEEEEEecCCccccc--cCCC----Cccc---cCCHHHhccCCCEEEECC
Confidence 479999999999999999887764 44 555 47765421111 1111 1111 346777788899999765
No 470
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=96.88 E-value=0.0092 Score=51.69 Aligned_cols=64 Identities=16% Similarity=0.187 Sum_probs=44.2
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
+||+|+|+ |.+|.+++..|...|+ ++++.++..... ...+.... +.. . +..+++++||+|+++.
T Consensus 4 kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~-~~~a~~~G----v~~---~-s~~ea~~~ADiVvLaV 67 (314)
T TIGR00465 4 KTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGAS-WKKATEDG----FKV---G-TVEEAIPQADLIMNLL 67 (314)
T ss_pred CEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhh-HHHHHHCC----CEE---C-CHHHHHhcCCEEEEeC
Confidence 58999999 9999999999999998 777665532111 11122211 111 1 3567889999999996
No 471
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.87 E-value=0.0031 Score=54.24 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=63.3
Q ss_pred hhhhhhhccccccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCch--hHHHhhcCCCCCcce
Q 028437 4 SVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTP--GVAADVGHINTRSEV 81 (209)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v 81 (209)
+.+-.++|-|-.+-+-+++. +...+++|+|+ |..+...+..+..--.+.+|.++++++.+ ....++.+. ....+
T Consensus 95 ~~lT~~RTaA~salaa~~l~--~da~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~-~~~~v 170 (301)
T PRK06407 95 NRLGQIRTGAVTAYATSILH--KNVENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKE-FGVDI 170 (301)
T ss_pred chHHHHHHHHHHHHHHHHhh--cCCcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHh-cCCcE
Confidence 44555666555555555664 35679999999 99999877766664446899999998532 233444432 12233
Q ss_pred eEeecCCchhhhcCCCCEEEEcCC
Q 028437 82 AGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 82 ~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
... ++.++++++||+|+.+..
T Consensus 171 ~~~---~~~~eav~~aDIV~taT~ 191 (301)
T PRK06407 171 RPV---DNAEAALRDADTITSITN 191 (301)
T ss_pred EEe---CCHHHHHhcCCEEEEecC
Confidence 332 467899999999998744
No 472
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=96.84 E-value=0.0051 Score=54.56 Aligned_cols=62 Identities=19% Similarity=0.354 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..++|+|+|. |.||+.++..|..-|. +|..+|+.... . ... .. ..++++.+++||+|++...
T Consensus 115 ~gktvGIIG~-G~IG~~vA~~l~a~G~--~V~~~dp~~~~--~---~~~-----~~----~~~L~ell~~sDiI~lh~P 176 (378)
T PRK15438 115 HDRTVGIVGV-GNVGRRLQARLEALGI--KTLLCDPPRAD--R---GDE-----GD----FRSLDELVQEADILTFHTP 176 (378)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCcccc--c---ccc-----cc----cCCHHHHHhhCCEEEEeCC
Confidence 4469999999 9999999999999998 99999863210 0 000 00 1357888999999998754
No 473
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=96.81 E-value=0.0099 Score=53.09 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=34.6
Q ss_pred CCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 24 ESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 24 ~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.+.++++|+|+||+|.+|+-++..|+++|+ .+...-++.
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf--~vra~VRd~ 113 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGF--SVRALVRDE 113 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCC--eeeeeccCh
Confidence 366778999999999999999999999998 888887864
No 474
>PRK09620 hypothetical protein; Provisional
Probab=96.81 E-value=0.0038 Score=51.64 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=45.8
Q ss_pred CCeEEEEcCC----------------CchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecC----
Q 028437 28 DRKVAVLGAA----------------GGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGN---- 87 (209)
Q Consensus 28 ~~kI~IiGas----------------G~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~---- 87 (209)
.+||+||+|. |++|++++..|+.+|+ +|++++.... .....+.. ...+..+...
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga--~V~li~g~~~-~~~~~~~~---~~~~~~V~s~~d~~ 76 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA--HVIYLHGYFA-EKPNDINN---QLELHPFEGIIDLQ 76 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC--eEEEEeCCCc-CCCcccCC---ceeEEEEecHHHHH
Confidence 3589999775 9999999999999999 9999987321 00000000 0011111111
Q ss_pred Cchhhhc--CCCCEEEEcCCCC
Q 028437 88 DQLGQAL--EDSDVVIIPAGVP 107 (209)
Q Consensus 88 ~d~~~a~--~~aD~Vi~~ag~~ 107 (209)
+.+.+.+ .++|+|||+|++.
T Consensus 77 ~~l~~~~~~~~~D~VIH~AAvs 98 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAAGS 98 (229)
T ss_pred HHHHHHhcccCCCEEEECcccc
Confidence 1234445 3689999999875
No 475
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.80 E-value=0.0086 Score=49.87 Aligned_cols=34 Identities=24% Similarity=0.492 Sum_probs=31.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.||+|+|+ |.+|+.++..|+..|. ++++++|.|.
T Consensus 25 ~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 58 (240)
T TIGR02355 25 SRVLIVGL-GGLGCAASQYLAAAGV-GNLTLLDFDT 58 (240)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence 49999999 9999999999999996 6999999973
No 476
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.79 E-value=0.0036 Score=53.91 Aligned_cols=92 Identities=13% Similarity=0.108 Sum_probs=59.6
Q ss_pred hhhhhhccccccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHh-CCCccEEEEEecCCch--hHHHhhcCCCCCcce
Q 028437 5 VLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKL-NPLVSRLALYDIANTP--GVAADVGHINTRSEV 81 (209)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~-~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v 81 (209)
.+-.++|-|-.+-+-.++.+. ...+++|+|+ |..|...+..+.. .+. .+|.++++++.+ ..+.++.... ..+
T Consensus 103 ~lT~~RTaA~sala~~~La~~-~~~~v~IiGa-G~qa~~~~~al~~~~~~-~~v~v~~r~~~~a~~~a~~~~~~~--~~~ 177 (304)
T PRK07340 103 TVTGRRTAAVSLLAARTLAPA-PPGDLLLIGT-GVQARAHLEAFAAGLPV-RRVWVRGRTAASAAAFCAHARALG--PTA 177 (304)
T ss_pred hHHHHHHHHHHHHHHHHhCCC-CCCEEEEECC-cHHHHHHHHHHHHhCCC-CEEEEEcCCHHHHHHHHHHHHhcC--Cee
Confidence 344555555555555555442 4468999999 9999999888865 443 599999998532 2333343221 112
Q ss_pred eEeecCCchhhhcCCCCEEEEcCC
Q 028437 82 AGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 82 ~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
. ..+.+++++++|+|+.+..
T Consensus 178 ~----~~~~~~av~~aDiVitaT~ 197 (304)
T PRK07340 178 E----PLDGEAIPEAVDLVVTATT 197 (304)
T ss_pred E----ECCHHHHhhcCCEEEEccC
Confidence 2 1367889999999999854
No 477
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.78 E-value=0.015 Score=47.92 Aligned_cols=34 Identities=35% Similarity=0.562 Sum_probs=30.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN 64 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~ 64 (209)
.||+|+|+ |.+|+.++..|+..|. ++++++|.+.
T Consensus 22 ~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 55 (228)
T cd00757 22 ARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV 55 (228)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 49999999 9999999999999996 6999999873
No 478
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=96.78 E-value=0.0035 Score=53.43 Aligned_cols=120 Identities=18% Similarity=0.165 Sum_probs=75.3
Q ss_pred cccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEec-CCc----hhHHHhhcCCCCC-cceeEeecC
Q 028437 14 KPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDI-ANT----PGVAADVGHINTR-SEVAGYMGN 87 (209)
Q Consensus 14 ~~~~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~-~~~----~~~~~dl~~~~~~-~~v~~~~~~ 87 (209)
|-+|||+=.+- .=.+|.|||||+|..++..|...|- ++.+==+ ++. .....||.+..+. -+++ +.
T Consensus 51 kGtGGRsS~sG----iVaTVFGAtGFlGryvvnklak~GS--QviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~---De 121 (391)
T KOG2865|consen 51 KGTGGRSSVSG----IVATVFGATGFLGRYVVNKLAKMGS--QVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLR---DE 121 (391)
T ss_pred CCCCCcccccc----eEEEEecccccccHHHHHHHhhcCC--eEEEeccCCccchhheeecccccceeeeccCCC---CH
Confidence 44566653222 2457999999999999999999996 6655433 221 1112345544321 1222 23
Q ss_pred CchhhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 028437 88 DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMIS 145 (209)
Q Consensus 88 ~d~~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~s 145 (209)
++++++++.+++||+..|.-...+ ..++.+.|..+.+.++..+++.+-+ ++|.+|
T Consensus 122 dSIr~vvk~sNVVINLIGrd~eTk--nf~f~Dvn~~~aerlAricke~GVe-rfIhvS 176 (391)
T KOG2865|consen 122 DSIRAVVKHSNVVINLIGRDYETK--NFSFEDVNVHIAERLARICKEAGVE-RFIHVS 176 (391)
T ss_pred HHHHHHHHhCcEEEEeeccccccC--CcccccccchHHHHHHHHHHhhChh-heeehh
Confidence 467889999999999987542111 2345677888888888888876544 344443
No 479
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.77 E-value=0.014 Score=50.73 Aligned_cols=67 Identities=21% Similarity=0.291 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 25 SVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 25 ~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
...-+++.|+|. |.||+.++..+..-|. +|..+|+.+. ......... .. .++++.++++|+|+..+
T Consensus 143 ~l~gktvGIiG~-GrIG~avA~r~~~Fgm--~v~y~~~~~~-~~~~~~~~~------~y----~~l~ell~~sDii~l~~ 208 (324)
T COG1052 143 DLRGKTLGIIGL-GRIGQAVARRLKGFGM--KVLYYDRSPN-PEAEKELGA------RY----VDLDELLAESDIISLHC 208 (324)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhcCCC--EEEEECCCCC-hHHHhhcCc------ee----ccHHHHHHhCCEEEEeC
Confidence 344579999999 9999999999996666 9999999753 122111111 11 13688899999999886
Q ss_pred C
Q 028437 105 G 105 (209)
Q Consensus 105 g 105 (209)
.
T Consensus 209 P 209 (324)
T COG1052 209 P 209 (324)
T ss_pred C
Confidence 4
No 480
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.76 E-value=0.0069 Score=46.37 Aligned_cols=55 Identities=31% Similarity=0.477 Sum_probs=45.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVP 107 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~ 107 (209)
.++|+|+|.+..+|..++..|.++|. ++..++.+ +.++++++++||+||.+.|.+
T Consensus 28 gk~v~VvGrs~~vG~pla~lL~~~ga--tV~~~~~~-----------------------t~~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 28 GKKVLVVGRSGIVGAPLQCLLQRDGA--TVYSCDWK-----------------------TIQLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEeCCC-----------------------CcCHHHHHhhCCEEEEecCCC
Confidence 35999999999999999999999987 88888652 124577889999999998876
No 481
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.75 E-value=0.0068 Score=52.23 Aligned_cols=62 Identities=24% Similarity=0.333 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..++|+|+|- |.||+.++..|..-|. +|..+|+.... .... .. ..++++.+++||+|+++..
T Consensus 121 ~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~--------~~~~---~~---~~~l~ell~~aDiv~~~lp 182 (303)
T PRK06436 121 YNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN--------DGIS---SI---YMEPEDIMKKSDFVLISLP 182 (303)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc--------cCcc---cc---cCCHHHHHhhCCEEEECCC
Confidence 4469999999 9999999998887788 99999985311 0000 00 1257888999999999864
No 482
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.75 E-value=0.0061 Score=51.65 Aligned_cols=69 Identities=25% Similarity=0.231 Sum_probs=44.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhC--CCccEEE-EEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLN--PLVSRLA-LYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~--g~~~ev~-l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
++||+|+|. |.+|+.++..|... ++ ++. ++|+++... .++.... . .... .+++++.++++|+|++++
T Consensus 6 ~irIGIIG~-G~IG~~~a~~L~~~~~~~--el~aV~dr~~~~a--~~~a~~~-g-~~~~---~~~~eell~~~D~Vvi~t 75 (271)
T PRK13302 6 ELRVAIAGL-GAIGKAIAQALDRGLPGL--TLSAVAVRDPQRH--ADFIWGL-R-RPPP---VVPLDQLATHADIVVEAA 75 (271)
T ss_pred eeEEEEECc-cHHHHHHHHHHHhcCCCe--EEEEEECCCHHHH--HHHHHhc-C-CCcc---cCCHHHHhcCCCEEEECC
Confidence 479999999 99999999888763 55 665 677764322 2221110 0 0001 135667788999999997
Q ss_pred CC
Q 028437 105 GV 106 (209)
Q Consensus 105 g~ 106 (209)
..
T Consensus 76 p~ 77 (271)
T PRK13302 76 PA 77 (271)
T ss_pred Cc
Confidence 53
No 483
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.75 E-value=0.022 Score=48.91 Aligned_cols=118 Identities=16% Similarity=0.217 Sum_probs=72.4
Q ss_pred eEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCC--chhHHHhhcCCCC-CcceeEeec-CCc-----hhhhcCCCC--
Q 028437 30 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIAN--TPGVAADVGHINT-RSEVAGYMG-NDQ-----LGQALEDSD-- 98 (209)
Q Consensus 30 kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~--~~~~~~dl~~~~~-~~~v~~~~~-~~d-----~~~a~~~aD-- 98 (209)
=-+|+||+..||...+.+|+++|+ .|+|+.|++ +.....|+.+... ..+...++. ..+ +++.+.+-|
T Consensus 51 WAVVTGaTDGIGKayA~eLAkrG~--nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 51 WAVVTGATDGIGKAYARELAKRGF--NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred EEEEECCCCcchHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 356999999999999999999999 999999985 3344445554431 112111111 122 455566655
Q ss_pred EEEEcCCCCC-CCCC----Ch---hHHHHHH----HHHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 028437 99 VVIIPAGVPR-KPGM----TR---DDLFNIN----AGIVKDLCSAIAKYCPNAIVNMISNPVNS 150 (209)
Q Consensus 99 ~Vi~~ag~~~-~~g~----~r---~~~~~~N----~~~~~~i~~~i~~~~p~~~viv~snP~~~ 150 (209)
+.|+.+|... .|.. +. .+.+..| ...++-+...|.+ .+.+.+++++.-.+.
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~-r~~G~IvnigS~ag~ 191 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVE-RKKGIIVNIGSFAGL 191 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhc-CCCceEEEecccccc
Confidence 4777888754 2220 11 1222233 2456667777775 567788888766554
No 484
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.75 E-value=0.027 Score=51.26 Aligned_cols=138 Identities=18% Similarity=0.180 Sum_probs=74.3
Q ss_pred cccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCc---hhHHHhhcCCCCCcceeEeecCCch
Q 028437 14 KPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANT---PGVAADVGHINTRSEVAGYMGNDQL 90 (209)
Q Consensus 14 ~~~~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~---~~~~~dl~~~~~~~~v~~~~~~~d~ 90 (209)
.|.+--+|.... ...+|+|+|+ |.+|..++..|.+.|+ +|+++|..+. ......+.... +....+. +.
T Consensus 3 ~~~~~~~~~~~~-~~~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~g----v~~~~~~-~~ 73 (480)
T PRK01438 3 RPPGLTSWHSDW-QGLRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEALG----ATVRLGP-GP 73 (480)
T ss_pred cccchhhcccCc-CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHcC----CEEEECC-Cc
Confidence 455555555544 3458999999 9999999999999998 9999997531 11112233322 1222111 11
Q ss_pred hhhcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHH--HHHHHHhhCCCeEEEEecCCCCC--cHHHHHHHHHHh
Q 028437 91 GQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKD--LCSAIAKYCPNAIVNMISNPVNS--TVPIAAEVFKKA 162 (209)
Q Consensus 91 ~~a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~--i~~~i~~~~p~~~viv~snP~~~--~~~i~~~~~~~~ 162 (209)
+...++|+||.+.|.+..... .......+++++.+ ++-.+.+...+.++|-+|...+= ++.+++.+++..
T Consensus 74 -~~~~~~D~Vv~s~Gi~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~~ 147 (480)
T PRK01438 74 -TLPEDTDLVVTSPGWRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRAA 147 (480)
T ss_pred -cccCCCCEEEECCCcCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHHc
Confidence 134579999999888642210 00111223333222 22122111123446667666543 336667776553
No 485
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.72 E-value=0.0057 Score=48.23 Aligned_cols=55 Identities=27% Similarity=0.522 Sum_probs=43.6
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGG-IGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~-vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
...||+|+|+ |. +|..++..|...|. +|++++++. +++.+.+++||+||.+.+
T Consensus 43 ~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat~ 96 (168)
T cd01080 43 AGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVAVG 96 (168)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEcCC
Confidence 3359999999 76 58889999999887 888887731 145677889999999977
Q ss_pred CC
Q 028437 106 VP 107 (209)
Q Consensus 106 ~~ 107 (209)
.+
T Consensus 97 ~~ 98 (168)
T cd01080 97 KP 98 (168)
T ss_pred CC
Confidence 65
No 486
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=96.72 E-value=0.0078 Score=53.49 Aligned_cols=62 Identities=23% Similarity=0.314 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..++|+|+|. |.||+.++..|...|. +|..+|+.... . .. . .. ..++++.+++||+|++...
T Consensus 115 ~gktvGIIG~-G~IG~~va~~l~a~G~--~V~~~Dp~~~~--~---~~-~----~~----~~~l~ell~~aDiV~lh~P 176 (381)
T PRK00257 115 AERTYGVVGA-GHVGGRLVRVLRGLGW--KVLVCDPPRQE--A---EG-D----GD----FVSLERILEECDVISLHTP 176 (381)
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCcccc--c---cc-C----cc----ccCHHHHHhhCCEEEEeCc
Confidence 3468999999 9999999999999999 99999874211 0 00 0 01 1257888999999999854
No 487
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.72 E-value=0.023 Score=44.55 Aligned_cols=65 Identities=17% Similarity=0.210 Sum_probs=42.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
.++|+|+|. |..|...+..|...|+ +|.+-.+........ -....+ + ..+.+|+.+.+|+|+++.
T Consensus 4 ~k~IAViGy-GsQG~a~AlNLrDSG~--~V~Vglr~~s~s~~~-A~~~Gf----~----v~~~~eAv~~aDvV~~L~ 68 (165)
T PF07991_consen 4 GKTIAVIGY-GSQGHAHALNLRDSGV--NVIVGLREGSASWEK-AKADGF----E----VMSVAEAVKKADVVMLLL 68 (165)
T ss_dssp TSEEEEES--SHHHHHHHHHHHHCC---EEEEEE-TTCHHHHH-HHHTT-----E----CCEHHHHHHC-SEEEE-S
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCC--CEEEEecCCCcCHHH-HHHCCC----e----eccHHHHHhhCCEEEEeC
Confidence 358999999 9999999999999999 988888764322211 111111 1 135689999999999984
No 488
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.69 E-value=0.0058 Score=52.17 Aligned_cols=56 Identities=16% Similarity=0.428 Sum_probs=44.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
...+|+|+|++|.+|..++..|+..|. +|++++++ +.++.+.++++|+||.+.|.
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~-----------------------t~~L~~~~~~aDIvI~AtG~ 212 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR-----------------------TQNLPELVKQADIIVGAVGK 212 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC-----------------------chhHHHHhccCCEEEEccCC
Confidence 346999999966699999999999987 88888651 12456667899999999874
Q ss_pred C
Q 028437 107 P 107 (209)
Q Consensus 107 ~ 107 (209)
+
T Consensus 213 ~ 213 (283)
T PRK14192 213 P 213 (283)
T ss_pred C
Confidence 4
No 489
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.68 E-value=0.011 Score=49.28 Aligned_cols=33 Identities=27% Similarity=0.485 Sum_probs=30.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecC
Q 028437 29 RKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIA 63 (209)
Q Consensus 29 ~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~ 63 (209)
.||+|+|+ |.+|+.++..|+..|. ++++++|.|
T Consensus 33 ~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D 65 (245)
T PRK05690 33 ARVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFD 65 (245)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCC
Confidence 49999999 9999999999999996 699999987
No 490
>PLN02494 adenosylhomocysteinase
Probab=96.68 E-value=0.02 Score=52.07 Aligned_cols=90 Identities=21% Similarity=0.235 Sum_probs=59.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh-HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG-VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~-~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
...+|+|+|. |.+|+.++..+...|. +|+++|+++... .+.. + .+. . .+++++++++|+||.+.|
T Consensus 253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~~--~-G~~----v----v~leEal~~ADVVI~tTG 318 (477)
T PLN02494 253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQALM--E-GYQ----V----LTLEDVVSEADIFVTTTG 318 (477)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHHh--c-CCe----e----ccHHHHHhhCCEEEECCC
Confidence 3469999999 9999999999998888 899999876321 2111 1 111 1 135678899999998755
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 028437 106 VPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMISNP 147 (209)
Q Consensus 106 ~~~~~g~~r~~~~~~N~~~~~~i~~~i~~~~p~~~viv~snP 147 (209)
... . .| . +.+....+.+++++++-+
T Consensus 319 t~~--------v--I~----~---e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 319 NKD--------I--IM----V---DHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred Ccc--------c--hH----H---HHHhcCCCCCEEEEcCCC
Confidence 321 0 01 1 233333467888888874
No 491
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.67 E-value=0.005 Score=52.50 Aligned_cols=57 Identities=18% Similarity=0.371 Sum_probs=46.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
...+|+|+|.||.+|..++..|++.|. +|+++... +.++++.+++||+||.++|.
T Consensus 157 ~Gk~v~vIG~S~ivG~Pla~lL~~~ga--tVtv~~s~-----------------------t~~l~~~~~~ADIVI~avg~ 211 (284)
T PRK14179 157 EGKHAVVIGRSNIVGKPMAQLLLDKNA--TVTLTHSR-----------------------TRNLAEVARKADILVVAIGR 211 (284)
T ss_pred CCCEEEEECCCCcCcHHHHHHHHHCCC--EEEEECCC-----------------------CCCHHHHHhhCCEEEEecCc
Confidence 336999999999999999999999998 88877221 12456788999999999887
Q ss_pred CC
Q 028437 107 PR 108 (209)
Q Consensus 107 ~~ 108 (209)
+.
T Consensus 212 ~~ 213 (284)
T PRK14179 212 GH 213 (284)
T ss_pred cc
Confidence 63
No 492
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.67 E-value=0.0065 Score=48.98 Aligned_cols=75 Identities=23% Similarity=0.313 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchh--HHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPG--VAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~--~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
.++|+|+|-|.-||..++..|++++- .|+++|++...- ....+.|...+ .... +.++.+.+++||+||.++|
T Consensus 62 GK~vvVIGrS~iVGkPla~lL~~~~A--tVti~~~~~~~~~~~~~~~~hs~t~--~~~~--~~~l~~~~~~ADIVIsAvG 135 (197)
T cd01079 62 GKTITIINRSEVVGRPLAALLANDGA--RVYSVDINGIQVFTRGESIRHEKHH--VTDE--EAMTLDCLSQSDVVITGVP 135 (197)
T ss_pred CCEEEEECCCccchHHHHHHHHHCCC--EEEEEecCccccccccccccccccc--ccch--hhHHHHHhhhCCEEEEccC
Confidence 35999999999999999999999997 999998753110 01111222100 0000 1126688999999999998
Q ss_pred CCC
Q 028437 106 VPR 108 (209)
Q Consensus 106 ~~~ 108 (209)
.+.
T Consensus 136 ~~~ 138 (197)
T cd01079 136 SPN 138 (197)
T ss_pred CCC
Confidence 774
No 493
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.67 E-value=0.022 Score=51.99 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=76.2
Q ss_pred cccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhh-cCCCCCcceeEeecCCchhh
Q 028437 14 KPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADV-GHINTRSEVAGYMGNDQLGQ 92 (209)
Q Consensus 14 ~~~~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl-~~~~~~~~v~~~~~~~d~~~ 92 (209)
.|--+|.+++.. ||+|+|+ |..|.+++..|...|. +|.+.|++.... .++ .... +..+....+ .+
T Consensus 5 ~~~~~~~~~~~~----~v~v~G~-G~sG~a~a~~L~~~G~--~V~~~D~~~~~~--~~~l~~~g----i~~~~~~~~-~~ 70 (473)
T PRK00141 5 VPLSALPQELSG----RVLVAGA-GVSGRGIAAMLSELGC--DVVVADDNETAR--HKLIEVTG----VADISTAEA-SD 70 (473)
T ss_pred ChhhhcccccCC----eEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCChHHH--HHHHHhcC----cEEEeCCCc-hh
Confidence 455666676663 7999999 9999999999999998 999999854211 121 2211 112211112 34
Q ss_pred hcCCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHHHHH-----hhCCCeEEEEecCCCCC--cHHHHHHHHHHh
Q 028437 93 ALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIA-----KYCPNAIVNMISNPVNS--TVPIAAEVFKKA 162 (209)
Q Consensus 93 a~~~aD~Vi~~ag~~~~~g~~r~~~~~~N~~~~~~i~~~i~-----~~~p~~~viv~snP~~~--~~~i~~~~~~~~ 162 (209)
.+.++|+||.+.|++...- ........+++++.++.-... .+....++|-+|...+= ++.+++.+++..
T Consensus 71 ~~~~~d~vV~Spgi~~~~p-~~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~ 146 (473)
T PRK00141 71 QLDSFSLVVTSPGWRPDSP-LLVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEG 146 (473)
T ss_pred HhcCCCEEEeCCCCCCCCH-HHHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhc
Confidence 4678999999988874221 111112333444433332211 12212246667666543 336667776654
No 494
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.67 E-value=0.0063 Score=54.79 Aligned_cols=67 Identities=19% Similarity=0.263 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGV 106 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~ 106 (209)
...+|+|+|+ |.+|..++..|...|. +|+++|+++.+...... . .+ .+ .+++++++++|+||.+.|.
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A~~-~-G~--~v------~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQAAM-D-GF--RV------MTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHHHh-c-CC--Ee------cCHHHHHhCCCEEEECCCC
Confidence 3458999999 9999999999999998 99999997632211111 1 11 11 1356788899999998764
No 495
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.66 E-value=0.0059 Score=52.41 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
...|++|+|+ |.+|..++..|...|. +|.++|+++.. ......... .... ..++.+.++++|+||.++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~--~~~~~~~G~--~~~~---~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAH--LARITEMGL--SPFH---LSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC--eeec---HHHHHHHhCCCCEEEECC
Confidence 3469999999 9999999999999997 99999997421 111111111 1111 135677889999999985
No 496
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.65 E-value=0.0053 Score=53.06 Aligned_cols=92 Identities=20% Similarity=0.276 Sum_probs=55.8
Q ss_pred hhhhhccccccccccccCCCCCCCeEEEEcCCCchHHHHHHHHHh-CCCccEEEEEecCCch--hHHHhhcCCCCCccee
Q 028437 6 LRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKL-NPLVSRLALYDIANTP--GVAADVGHINTRSEVA 82 (209)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~kI~IiGasG~vG~~la~~L~~-~g~~~ev~l~D~~~~~--~~~~dl~~~~~~~~v~ 82 (209)
+-.++|-|-.+-+=+++.+ ....+|+|+|+ |.+|...+..+.. .+ +.+|+++++++.+ ....++.+.. ..+.
T Consensus 104 lT~~RTaa~sala~~~La~-~~~~~v~iiG~-G~~a~~~~~al~~~~~-~~~V~V~~Rs~~~a~~~a~~~~~~g--~~~~ 178 (314)
T PRK06141 104 LTARRTAAASALAASYLAR-KDASRLLVVGT-GRLASLLALAHASVRP-IKQVRVWGRDPAKAEALAAELRAQG--FDAE 178 (314)
T ss_pred hhcchhHHHHHHHHHHhCC-CCCceEEEECC-cHHHHHHHHHHHhcCC-CCEEEEEcCCHHHHHHHHHHHHhcC--CceE
Confidence 3344444444444334433 24468999998 9999999876554 44 3599999997532 2233333221 1222
Q ss_pred EeecCCchhhhcCCCCEEEEcCC
Q 028437 83 GYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 83 ~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
. ..+.++++++||+|+.+..
T Consensus 179 ~---~~~~~~av~~aDIVi~aT~ 198 (314)
T PRK06141 179 V---VTDLEAAVRQADIISCATL 198 (314)
T ss_pred E---eCCHHHHHhcCCEEEEeeC
Confidence 2 2467789999999977644
No 497
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.63 E-value=0.0049 Score=52.68 Aligned_cols=67 Identities=19% Similarity=0.226 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcC
Q 028437 28 DRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPA 104 (209)
Q Consensus 28 ~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~a 104 (209)
..+|+|+|+ |.+|..++..|...|. +|+++++++... ........ ..+. ..++++.++++|+||++.
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g~----~~~~-~~~l~~~l~~aDiVint~ 217 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMGL----IPFP-LNKLEEKVAEIDIVINTI 217 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCCC----eeec-HHHHHHHhccCCEEEECC
Confidence 459999999 9999999999999997 999999975211 11111111 1110 135677889999999985
No 498
>PRK06932 glycerate dehydrogenase; Provisional
Probab=96.63 E-value=0.016 Score=50.23 Aligned_cols=62 Identities=15% Similarity=0.281 Sum_probs=46.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 26 VPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 26 ~~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
...++|+|+|. |.||+.++..+..-|. +|..+|+... .+... . ..++++.+++||+|++...
T Consensus 145 l~gktvgIiG~-G~IG~~va~~l~~fg~--~V~~~~~~~~----~~~~~-------~----~~~l~ell~~sDiv~l~~P 206 (314)
T PRK06932 145 VRGSTLGVFGK-GCLGTEVGRLAQALGM--KVLYAEHKGA----SVCRE-------G----YTPFEEVLKQADIVTLHCP 206 (314)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHhcCCC--EEEEECCCcc----ccccc-------c----cCCHHHHHHhCCEEEEcCC
Confidence 34469999999 9999999999988888 9999886321 01100 0 1257899999999999864
No 499
>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.
Probab=96.62 E-value=0.017 Score=52.13 Aligned_cols=69 Identities=26% Similarity=0.514 Sum_probs=47.9
Q ss_pred eEEEEcCCCchHHH-HHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCCCCC
Q 028437 30 KVAVLGAAGGIGQP-LALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPR 108 (209)
Q Consensus 30 kI~IiGasG~vG~~-la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag~~~ 108 (209)
+|.++|. |..|.+ ++..|.+.|+ +|...|..... ...+|.... +..+.+ .+ .+.++++|+||.+.|.+.
T Consensus 1 ~~~~iGi-ggsGm~~la~~L~~~G~--~v~~~D~~~~~-~~~~l~~~g----i~~~~g-~~-~~~~~~~d~vV~spgi~~ 70 (448)
T TIGR01082 1 KIHFVGI-GGIGMSGIAEILLNRGY--QVSGSDIAENA-TTKRLEALG----IPIYIG-HS-AENLDDADVVVVSAAIKD 70 (448)
T ss_pred CEEEEEE-CHHHHHHHHHHHHHCCC--eEEEECCCcch-HHHHHHHCc----CEEeCC-CC-HHHCCCCCEEEECCCCCC
Confidence 5889999 999998 9999999999 99999975432 222343322 112111 23 355778999999988764
No 500
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.61 E-value=0.007 Score=52.28 Aligned_cols=62 Identities=21% Similarity=0.329 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHhCCCccEEEEEecCCchhHHHhhcCCCCCcceeEeecCCchhhhcCCCCEEEEcCC
Q 028437 27 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAG 105 (209)
Q Consensus 27 ~~~kI~IiGasG~vG~~la~~L~~~g~~~ev~l~D~~~~~~~~~dl~~~~~~~~v~~~~~~~d~~~a~~~aD~Vi~~ag 105 (209)
..++|+|+|- |.||+.++..+..-|. +|..+|+.... . +.. +.. .++++.++.||+|++...
T Consensus 144 ~gktvGIiG~-G~IG~~vA~~~~~fgm--~V~~~d~~~~~---~---~~~----~~~----~~l~ell~~sDvv~lh~P 205 (311)
T PRK08410 144 KGKKWGIIGL-GTIGKRVAKIAQAFGA--KVVYYSTSGKN---K---NEE----YER----VSLEELLKTSDIISIHAP 205 (311)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhcCC--EEEEECCCccc---c---ccC----cee----ecHHHHhhcCCEEEEeCC
Confidence 4469999999 9999999999987787 99999984211 0 111 111 257899999999999864
Done!