Citrus Sinensis ID: 028444

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Secondary Structure (PSIPRED)
cEEEEEccccHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEEEEcccHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHcccccEEEEEHHHHHccc
Secondary Structure Prediction (SSPRO)
cEEEEEccHHHHHHHHHHHHHHcccEEEEEccccHHHHcccccccEEEEEEccccHHHHHHHHccccEEEEEEEEccccccccHHHHcHcHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccEEEEEEccccccEEEEEEEHHHHHcc
Coil and Loop (DISEMBL)
mkilvsgasgylgGRLCHALLKQGHSVRALVRrtsdisglpsegaleLVYGDVTDYRSLVDACFGCHVIFHTaalvepwlpdpsrffAVNVEGLKNVVQAAKETKTVEKIIYTSSffalgstdgyiadenqVHEEKYFCTQYERSKAVADKIALQAAseglpivpvypgviygpgklttGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Flexible Loop (DISEMBL)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRtsdisglpsegALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Low Complexity Region (SEG)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Disordered region (IsUnstruct)
***LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCH**
Disordered Region (DISOPRED)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Disordered Region (DISEMBL)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Disordered Region (DISPRO)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	209	2.2.26 [Sep-21-2011]
P73212	343	Putative dihydroflavonol-	N/A	no	0.856	0.521	0.343	6e-20
O53454	370	3 beta-hydroxysteroid deh	yes	no	0.822	0.464	0.335	9e-16
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.818	0.483	0.310	7e-14
Q9SEV0	340	Anthocyanidin reductase O	no	no	0.822	0.505	0.305	2e-12
P51102	382	Dihydroflavonol-4-reducta	no	no	0.985	0.539	0.273	2e-12
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.808	0.461	0.281	2e-12
P14721	446	Dihydroflavonol-4-reducta	N/A	no	0.947	0.443	0.273	7e-12
P51103	364	Dihydroflavonol-4-reducta	N/A	no	0.540	0.310	0.347	1e-11
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.818	0.491	0.289	2e-11
O46516	373	3 beta-hydroxysteroid deh	yes	no	0.827	0.463	0.310	2e-11

>sp|P73212|DFRA_SYNY3 Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1

 Score = 97.4 bits (241), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 13/192 (6%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVR---RTSDISGLPSEGALELVYGDVTDYRSLV 60
            V+G +G++G  L   LL+QG+ VRALVR   R  ++  LP    ++ V GD+ D   L 
Sbjct: 14  FVTGGTGFVGANLVRHLLEQGYQVRALVRASSRPDNLQNLP----IDWVVGDLND-GDLH 68

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               GC  +FH AA    W  D    +  NV G +N++  A++   +E+ +YTSS  A+G
Sbjct: 69  QQMQGCQGLFHVAAHYSLWQKDREALYRSNVLGTRNILACAQKAG-IERTVYTSSVAAIG 127

Query: 121 -STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT- 178
              DG  ADE+     +     Y++SK  A++ AL AA +G  IV V P    GP  +  
Sbjct: 128 VKGDGQRADESYQSPVEKLIGAYKQSKYWAEQEALTAAQQGQDIVIVNPSTPIGPWDIKP 187

Query: 179 --TGNLVAKLVR 188
             TG ++ + +R
Sbjct: 188 TPTGEIILRFLR 199

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9

>sp|O53454|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis GN=Rv1106c PE=1 SV=1

 Score = 83.6 bits (205), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 13/185 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+G +G++G  L   LL +GH VR+  R  S    LP+   LE++ GD+TD      
Sbjct: 16  RVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSL---LPAHPQLEVLQGDITDADVCAA 72

Query: 62  ACFGCHVIFHTAALVE----PWLPDP--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A  G   IFHTAA++E      + D    R FAVNV G +N++ A +    V++ +YTSS
Sbjct: 73  AVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSS 131

Query: 116 -FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL-QAASEGLPIVPVYPGVIYG 173
               +G  +    DE   + ++ F   Y  +K VA++  L Q   +G+    + P  I+G
Sbjct: 132 NSVVMGGQNIAGGDETLPYTDR-FNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG 190

Query: 174 PGKLT 178
            G  T
Sbjct: 191 NGDQT 195

3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively.

Mycobacterium tuberculosis (taxid: 1773)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 19/190 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLP-SEGALELVYGDVTD 55
           ++V+GASG++G  L   LL+ G++VRA VR      +T  +  LP ++  L +   D+++
Sbjct: 8   VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSE 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  ++    DP +      VEG+ ++++A KE  TV++I++TS
Sbjct: 68  DGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTS 127

Query: 115 SFFALG---------STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIV 164
           S  ++            D + +D +     K     Y  SKA+A+K A++ ASE GL  +
Sbjct: 128 SAGSVNIEERPRPAYDQDNW-SDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFI 186

Query: 165 PVYPGVIYGP 174
            + P ++ GP
Sbjct: 187 SIIPTLVVGP 196

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 18/190 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTD 55
           K  V G +G L   L   LL+ G+ V   VR      + + +  L   G L++   D+TD
Sbjct: 12  KACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTD 71

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S   +  GC  IFH A  +     DP +      ++G+ NV+++  ++K+V+++IYTS
Sbjct: 72  EDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTS 131

Query: 115 SFFALG----STDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASEG-LPI 163
           S  A+     S  G + +E        + EEK F   Y  SK +A+K A + A E  + +
Sbjct: 132 SAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINL 191

Query: 164 VPVYPGVIYG 173
           V V P +I G
Sbjct: 192 VTVIPALIAG 201

Involved in the biosynthesis of condensed tannins. Converts cyanidin into (-)-epicatechin as the major product.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 24/230 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPS-EGALELVYGDVTD 55
           + V+GASG++G  L   LL++G+ VRA VR   ++        LP+ +  L L   D+++
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLSE 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  DA  GC  +FH A  ++    DP +      V G+  +++A  + KTV + ++TS
Sbjct: 68  EGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTS 127

Query: 115 SFFALGSTD--GYIADENQVHEEKYFCTQ------YERSKAVADKIALQAASE-GLPIVP 165
           S   +   +    + DEN   + ++  ++      Y  SK +A+K A   A E GL  + 
Sbjct: 128 SAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFIS 187

Query: 166 VYPGVIYGPGKLTT--GNLVAKLVRLLFSQ-HFSLV----FFHCQITCHA 208
           + P ++ GP   T+   +L+  L  +  ++ H+S++    + H    C+A
Sbjct: 188 IIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNA 237

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 23/192 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G+ V A VR   D+        LP ++  L+L   D+T 
Sbjct: 9   VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQ 68

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GCH +FH A  ++    DP +      +EG+ +++++  + KTV+K+++TS
Sbjct: 69  EGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTS 128

Query: 115 SFFALGSTDG-----YIADENQ------VHEEKYFCTQYERSKAVADKIALQAAS-EGLP 162
           S    G+ +G     ++ DE+       ++ +K     Y  SK +A+K A  A     + 
Sbjct: 129 S---AGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNIS 185

Query: 163 IVPVYPGVIYGP 174
            + + P ++ GP
Sbjct: 186 FISIIPTLVVGP 197

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14721|DFRA_ANTMA Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1

 Score = 70.5 bits (171), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 25/223 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G++VRA VR   ++        LP ++  L L   D+T 
Sbjct: 20  VCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTV 79

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  +E    DP +      ++G+ N++++  + KTV+K I+T+
Sbjct: 80  EGSFDEAIQGCEGVFHLATSMEFDSVDPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTT 139

Query: 115 SFFALG----------STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPI 163
           S   +            TD   +D + ++ +K     Y  SK +A+K  ++AA E  +  
Sbjct: 140 SGGTVNVEEHQKPVYDETDS--SDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDF 197

Query: 164 VPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQ-HFSLVFFHCQ 203
           + + P ++ GP  + T   +L+  L  +  ++ H+S++   CQ
Sbjct: 198 ISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSII-KQCQ 239

Antirrhinum majus (taxid: 4151)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 8/121 (6%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G+ VRA VR   D+        LP +E  L L   D+T 
Sbjct: 9   VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADLTQ 68

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GCH +FH A  ++    DP +      +EG+ +++++  + KTV+K++YTS
Sbjct: 69  EGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTS 128

Query: 115 S 115
           S
Sbjct: 129 S 129

Callistephus chinensis (taxid: 13379)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 19/190 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLP-SEGALELVYGDVTD 55
           + V+GASG++G  L   LL+ G++VRA VR  ++      +  LP +E  L L   D+ D
Sbjct: 8   VCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLAD 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  ++    DP +      + GL ++++A ++ KTV K+++TS
Sbjct: 68  EGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTS 127

Query: 115 SFFALGSTDGY--IADENQVHEEKYFCTQ-------YERSKAVADKIALQAASE-GLPIV 164
           S   +   +    + DE+   + + FC         Y  SK +A++ A + A E  +  +
Sbjct: 128 SAGTVNVEEHQKPVYDESNWSDVE-FCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFI 186

Query: 165 PVYPGVIYGP 174
            + P ++ GP
Sbjct: 187 TIIPTLVIGP 196

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|O46516|3BHS_HORSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Equus caballus GN=HSD3B PE=2 SV=3

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%)

Query: 4   LVSGASGYLGGRLCHALL--KQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDY 56
           LV+GA G+LG R+   L+  K+   +RAL +        + S L S+  L ++ GD+ D 
Sbjct: 7   LVTGAGGFLGQRIVRLLVEEKEVQEIRALDKVFRPELREEFSKLQSKVKLTVLEGDILDE 66

Query: 57  RSLVDACFGCHVIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           + L  AC G   + HTA++++   L +P     VNVEG + +++A  +  +V   IYTSS
Sbjct: 67  QFLKRACQGASAVIHTASIIDVTNLFNPQVTMNVNVEGTQLLLEACSQA-SVPIFIYTSS 125

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA--ASEGLPI--------VP 165
             A+   + Y       HEE +  T++      + K+A +A  A+ GLP+          
Sbjct: 126 -VAVAGPNSYREIIQNGHEEAHLETKWSSPYPYSKKLAEKAVLAANGLPLKNGGTLYTCA 184

Query: 166 VYPGVIYGPGKLT 178
           + P  IYG G  T
Sbjct: 185 LRPMFIYGEGSPT 197

3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidative conversion of Delta(5)-ene-3-beta-hydroxy steroid, and the oxidative conversion of ketosteroids. The 3-beta-HSD enzymatic system plays a crucial role in the biosynthesis of all classes of hormonal steroids.

Equus caballus (taxid: 9796)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
255538356	334	dihydroflavonal-4-reductase, putative [R	0.894	0.559	0.780	2e-84
297798600	343	predicted protein [Arabidopsis lyrata su	0.885	0.539	0.780	1e-82
224067274	337	predicted protein [Populus trichocarpa]	0.894	0.554	0.789	2e-82
186515880	305	Rossmann-fold NAD(P)-binding domain-cont	0.885	0.606	0.748	4e-81
21450875	338	unknown protein [Arabidopsis thaliana]	0.885	0.547	0.748	6e-81
15234163	344	Rossmann-fold NAD(P)-binding domain-cont	0.885	0.537	0.748	7e-81
334187127	327	Rossmann-fold NAD(P)-binding domain-cont	0.885	0.565	0.748	1e-80
225458585	339	PREDICTED: putative dihydroflavonol-4-re	0.894	0.551	0.75	2e-80
147866715	339	hypothetical protein VITISV_023179 [Viti	0.894	0.551	0.75	2e-80
449498709	335	PREDICTED: LOW QUALITY PROTEIN: putative	0.894	0.558	0.755	3e-80

>gi|255538356|ref|XP_002510243.1| dihydroflavonal-4-reductase, putative [Ricinus communis] gi|223550944|gb|EEF52430.1| dihydroflavonal-4-reductase, putative [Ricinus communis]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 146/187 (78%), Positives = 174/187 (93%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK++V+GASGYLGGRLCHAL+++GHS+RALVRRTSD+S LP+  +LEL YGD+TDYRSL+
Sbjct: 1   MKVVVTGASGYLGGRLCHALIEEGHSIRALVRRTSDLSALPTADSLELAYGDITDYRSLL 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  GCHVIFHTAALVEPWLPDPS+FF+VNV GLKNV++AA+ETKT+EKIIYTSSFFALG
Sbjct: 61  AAFSGCHVIFHTAALVEPWLPDPSKFFSVNVGGLKNVLEAARETKTIEKIIYTSSFFALG 120

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
            TDG++ADE+QVH EK FCT+YERSKA ADKIALQAA++G+PIV VYPGVIYGPGKLTTG
Sbjct: 121 PTDGFVADESQVHPEKVFCTEYERSKATADKIALQAAADGVPIVMVYPGVIYGPGKLTTG 180

Query: 181 NLVAKLV 187
           N+VA+L+
Sbjct: 181 NVVAQLL 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798600|ref|XP_002867184.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313020|gb|EFH43443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 146/187 (78%), Positives = 169/187 (90%), Gaps = 2/187 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCHALL++GHSVRALVRRTSDIS LP E  +EL YGDVTDYRSL 
Sbjct: 12  MKILVTGSTGYLGARLCHALLRRGHSVRALVRRTSDISDLPPE--VELAYGDVTDYRSLT 69

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 70  DACSGCDIVFHAAALVEPWLPDPSRFVSVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 129

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+E+QVH E++FCT+YERSKA ADKIAL AASEG+PI+ +YPGVIYGPGKLTTG
Sbjct: 130 STDGSVANEDQVHSERFFCTEYERSKATADKIALNAASEGVPIILLYPGVIYGPGKLTTG 189

Query: 181 NLVAKLV 187
           N+VAKL+
Sbjct: 190 NMVAKLL 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067274|ref|XP_002302442.1| predicted protein [Populus trichocarpa] gi|222844168|gb|EEE81715.1| predicted protein [Populus trichocarpa]

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/190 (78%), Positives = 170/190 (89%), Gaps = 3/190 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYR 57
           MK LV+GASGYLGGRLCH LLKQGHSVRALVRRTSDIS LP   S G  EL YGD+TDY+
Sbjct: 1   MKALVTGASGYLGGRLCHGLLKQGHSVRALVRRTSDISELPPPSSGGVFELAYGDITDYQ 60

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           SL+DA  GC VIFH AA+VEPWLPDPS+FF+VNVEGL NV+QAAKET+T+EKIIYTSSFF
Sbjct: 61  SLLDAFSGCQVIFHAAAIVEPWLPDPSKFFSVNVEGLNNVLQAAKETETIEKIIYTSSFF 120

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL 177
           ALGSTDGY+ADE+QVH EK FCT+YERSK +ADKIA QAA+EG+PIV +YPGVIYGPGKL
Sbjct: 121 ALGSTDGYVADESQVHCEKRFCTEYERSKMIADKIASQAAAEGVPIVMLYPGVIYGPGKL 180

Query: 178 TTGNLVAKLV 187
           TTGN+VA+L+
Sbjct: 181 TTGNIVAQLL 190

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186515880|ref|NP_001119109.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332660814|gb|AEE86214.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 140/187 (74%), Positives = 168/187 (89%), Gaps = 2/187 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 13  MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 71  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query: 181 NLVAKLV 187
           N+VA+++
Sbjct: 191 NMVARML 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21450875|gb|AAK59445.2| unknown protein [Arabidopsis thaliana]

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 140/187 (74%), Positives = 168/187 (89%), Gaps = 2/187 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 7   MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 64

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 65  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 124

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 125 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 184

Query: 181 NLVAKLV 187
           N+VA+++
Sbjct: 185 NMVARML 191

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234163|ref|NP_195062.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|13926213|gb|AAK49584.1|AF370578_1 putative protein [Arabidopsis thaliana] gi|4490303|emb|CAB38794.1| putative protein [Arabidopsis thaliana] gi|7270284|emb|CAB80053.1| putative protein [Arabidopsis thaliana] gi|26983846|gb|AAN86175.1| unknown protein [Arabidopsis thaliana] gi|332660813|gb|AEE86213.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 140/187 (74%), Positives = 168/187 (89%), Gaps = 2/187 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 13  MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 71  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query: 181 NLVAKLV 187
           N+VA+++
Sbjct: 191 NMVARML 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187127|ref|NP_001190902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332660815|gb|AEE86215.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 140/187 (74%), Positives = 168/187 (89%), Gaps = 2/187 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 1   MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 58

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 59  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 118

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 119 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 178

Query: 181 NLVAKLV 187
           N+VA+++
Sbjct: 179 NMVARML 185

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458585|ref|XP_002284636.1| PREDICTED: putative dihydroflavonol-4-reductase [Vitis vinifera] gi|302142332|emb|CBI19535.3| unnamed protein product [Vitis vinifera]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/192 (75%), Positives = 168/192 (87%), Gaps = 5/192 (2%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTD 55
           MK+LV+GASGYLGGRLCHALL+ GH VRA VRR+SD+S LP      +GALEL YGDVT+
Sbjct: 1   MKVLVTGASGYLGGRLCHALLRHGHVVRAFVRRSSDLSCLPPVGGGDDGALELAYGDVTE 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           YR+++ AC GC V+FH AALVEPWLPDPSRF +VNV GLKNV+QA KETKTVEK+IYTSS
Sbjct: 61  YRAVLAACDGCQVVFHVAALVEPWLPDPSRFLSVNVGGLKNVLQAVKETKTVEKLIYTSS 120

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           FFALGSTDGY+ADE+Q+H EK+FCT+YERSK VADKIALQAA EG PIV VYPGVIYGPG
Sbjct: 121 FFALGSTDGYVADESQIHPEKFFCTEYERSKVVADKIALQAAVEGSPIVVVYPGVIYGPG 180

Query: 176 KLTTGNLVAKLV 187
           K+T GN+VA+++
Sbjct: 181 KVTAGNIVARML 192

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866715|emb|CAN78410.1| hypothetical protein VITISV_023179 [Vitis vinifera]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/192 (75%), Positives = 168/192 (87%), Gaps = 5/192 (2%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTD 55
           MK+LV+GASGYLGGRLCHALL+ GH VRA VRR+SD+S LP      +GALEL YGDVT+
Sbjct: 1   MKVLVTGASGYLGGRLCHALLRHGHVVRAFVRRSSDLSCLPPVGGGDDGALELAYGDVTE 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           YR+++ AC GC V+FH AALVEPWLPDPSRF +VNV GLKNV+QA KETKTVEK+IYTSS
Sbjct: 61  YRAVLAACDGCQVVFHVAALVEPWLPDPSRFLSVNVGGLKNVLQAVKETKTVEKLIYTSS 120

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           FFALGSTDGY+ADE+Q+H EK+FCT+YERSK VADKIALQAA EG PIV VYPGVIYGPG
Sbjct: 121 FFALGSTDGYVADESQIHPEKFFCTEYERSKVVADKIALQAAVEGSPIVVVYPGVIYGPG 180

Query: 176 KLTTGNLVAKLV 187
           K+T GN+VA+++
Sbjct: 181 KVTAGNIVARML 192

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449498709|ref|XP_004160612.1| PREDICTED: LOW QUALITY PROTEIN: putative dihydroflavonol-4-reductase-like [Cucumis sativus]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 142/188 (75%), Positives = 170/188 (90%), Gaps = 1/188 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL 59
           MKILV+GASGYLGGRLC ALL +G SVRALVR TSD+S LP +  ALELV+GD+TDY+SL
Sbjct: 1   MKILVTGASGYLGGRLCRALLNRGFSVRALVRPTSDLSSLPHDPSALELVHGDITDYQSL 60

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           ++AC GCHV+FH AA+VEPWLPDPS+F +VNV GL+NV+QA +ETKT+EKIIYTSSFFAL
Sbjct: 61  LEACSGCHVVFHAAAMVEPWLPDPSKFISVNVRGLQNVLQAVRETKTIEKIIYTSSFFAL 120

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
           GSTDGY+A E+QVH EK+FCT+YE+SKA ADKIALQAASEG+PIVPVYPGVIYG GK+T 
Sbjct: 121 GSTDGYVAVESQVHHEKFFCTEYEKSKATADKIALQAASEGIPIVPVYPGVIYGVGKVTA 180

Query: 180 GNLVAKLV 187
           GN+VA+++
Sbjct: 181 GNVVARML 188

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
TAIR|locus:2119161	344	FLDH "farnesol dehydrogenase"	0.885	0.537	0.748	2.7e-75
UNIPROTKB|Q60A54	328	MCA1017 "Nucleoside diphosphat	0.818	0.521	0.394	4.2e-24
UNIPROTKB|Q74FC2	328	hpnA "NAD-dependent nucleoside	0.866	0.551	0.336	3.9e-21
TIGR_CMR|GSU_0687	328	GSU_0687 "dihydroflavonol 4-re	0.866	0.551	0.336	3.9e-21
UNIPROTKB|P96816	340	Rv0139 "Dihydroflavonol-4-redu	0.789	0.485	0.348	7.2e-20
TAIR|locus:2171258	324	AT5G58490 [Arabidopsis thalian	0.803	0.518	0.354	6.3e-17
4-isomerase" [Mycobacterium tuberculosis (taxid:1773)]" target="_blank" href="http://amigo.geneontology.org/cgi-bin/amigo/gp-assoc.cgi?gp=UniProtKB:O53454&session_id=5777amigo1369096009">UNIPROTKB|O53454	370	MT1137 "3 beta-hydroxysteroid	0.904	0.510	0.317	8e-17
TIGR_CMR|GSU_1975	336	GSU_1975 "NAD-dependent epimer	0.803	0.5	0.353	1.4e-16
WB|WBGene00017429	343	F13D11.4 [Caenorhabditis elega	0.885	0.539	0.318	7.8e-16
ZFIN|ZDB-GENE-030131-5673	368	hsd3b7 "hydroxy-delta-5-steroi	0.727	0.413	0.296	2.9e-15

TAIR|locus:2119161 FLDH "farnesol dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 140/187 (74%), Positives = 168/187 (89%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct:    13 MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
             DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct:    71 DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query:   121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
             STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct:   131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query:   181 NLVAKLV 187
             N+VA+++
Sbjct:   191 NMVARML 197

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006721 "terpenoid metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0016487 "farnesol metabolic process" evidence=IDA

GO:0047886 "farnesol dehydrogenase activity" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

UNIPROTKB|Q60A54 MCA1017 "Nucleoside diphosphate sugar epimerase family protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 69/175 (39%), Positives = 99/175 (56%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSL 59
             M  LV+GA+G+LG  L  ALL +G  VRA +RR SD++ L  +G A+E  YGD+ D RS+
Sbjct:     1 MTTLVTGATGHLGANLVRALLARGEKVRAFIRRQSDVAAL--DGLAVERAYGDLRDRRSI 58

Query:    60 VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
              DA  G   ++HTAA V     D    F VNV G + ++Q A+    V ++++TSSF A+
Sbjct:    59 RDALEGVERLYHTAAFVSIRDGDRQELFDVNVVGTRMLMQEARRAG-VRRVVHTSSFGAV 117

Query:   120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP 174
             G      ++E+         T YER+KAV++   +  A  GL +  V P  I GP
Sbjct:   118 GINPQGASNEHWTVSPFEPGTDYERTKAVSEHDVILEAVRGLDVTIVNPAAIVGP 172

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q74FC2 hpnA "NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 63/187 (33%), Positives = 99/187 (52%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MK+ V+GA+G++G  +   LLK G  VR L R  SD   L     +E+  GD+ D ++L 
Sbjct:     1 MKVFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLD-VEICEGDLRDRQALE 59

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 GC V++H AA    W   P+  +A NV+G +N+++AA   + + +++YTSS   LG
Sbjct:    60 HGLAGCEVLYHAAADYRLWTRTPAAMYAANVDGTRNILEAALR-RGIARVVYTSSVGTLG 118

Query:   121 ST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG--KL 177
             +  +G    E            Y++SK +A++ A    + GLP+V V P    GP   K 
Sbjct:   119 NPGNGTPGTETTPVTFADMVGHYKKSKFLAEREAEAFIARGLPLVIVNPSTPVGPHDVKP 178

Query:   178 T-TGNLV 183
             T TG ++
Sbjct:   179 TPTGKII 185

GO:0006694 "steroid biosynthetic process" evidence=ISS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS

TIGR_CMR|GSU_0687 GSU_0687 "dihydroflavonol 4-reductase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 63/187 (33%), Positives = 99/187 (52%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MK+ V+GA+G++G  +   LLK G  VR L R  SD   L     +E+  GD+ D ++L 
Sbjct:     1 MKVFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLD-VEICEGDLRDRQALE 59

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 GC V++H AA    W   P+  +A NV+G +N+++AA   + + +++YTSS   LG
Sbjct:    60 HGLAGCEVLYHAAADYRLWTRTPAAMYAANVDGTRNILEAALR-RGIARVVYTSSVGTLG 118

Query:   121 ST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG--KL 177
             +  +G    E            Y++SK +A++ A    + GLP+V V P    GP   K 
Sbjct:   119 NPGNGTPGTETTPVTFADMVGHYKKSKFLAEREAEAFIARGLPLVIVNPSTPVGPHDVKP 178

Query:   178 T-TGNLV 183
             T TG ++
Sbjct:   179 TPTGKII 185

GO:0006694 "steroid biosynthetic process" evidence=ISS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS

UNIPROTKB|P96816 Rv0139 "Dihydroflavonol-4-reductase" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 63/181 (34%), Positives = 95/181 (52%)

Query:     4 LVSGASGYLGGRLCHALLK----QGHSVRALVR---RTSDISGLPSEGALELVYGDVTDY 56
             LV GA+G+LG  +   L+     Q   VRA+VR    T  I  LP    L   +GDV D 
Sbjct:     6 LVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPAANTRSIDDLP----LTRFHGDVFDT 61

Query:    57 RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
              ++ +A  GC  +++       WL DPS  F  NV GL+NV+  A +  ++ + ++TSS+
Sbjct:    62 ATVAEAMAGCDDVYYCVVDTRAWLRDPSPLFRTNVAGLRNVLDVATDA-SLRRFVFTSSY 120

Query:   117 FALGSTDGYIA-DENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
               +G   G++A +E++V   K   T Y RS+  A+ + LQ A + GLP V +     YG 
Sbjct:   121 ATVGRRRGHVATEEDRVDTRKV--TPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGG 178

Query:   175 G 175
             G
Sbjct:   179 G 179

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 6.3e-17, P = 6.3e-17
 Identities = 68/192 (35%), Positives = 103/192 (53%)

Query:     3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSEGA---LELVYGDV 53
             + V+GASG +G  L H LL +G+SV A V+   D      + GL  EGA   L L   D+
Sbjct:     9 VCVTGASGCIGSWLVHQLLLRGYSVHATVKNLQDEKETKHLEGL--EGAATRLHLFEMDL 66

Query:    54 TDYRSLVDACFGCHVIFHTAA--LVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKI 110
               Y ++  A  GC  +FH A+  +V+  + DP +      V+G  NV+ AAKE  +V+++
Sbjct:    67 LQYDTVSAAINGCSGVFHLASPCIVDE-VQDPQKQLLDPAVKGTINVLTAAKEA-SVKRV 124

Query:   111 IYTSSFFALGSTDGYIADENQVHE---EKYFCTQ----YERSKAVADKIALQAASE-GLP 162
             + TSS  A+  +  + AD+ +  E    + +C Q    Y  SK +A+K A + A E GL 
Sbjct:   125 VVTSSISAITPSPNWPADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKGLD 184

Query:   163 IVPVYPGVIYGP 174
             +V V PG + GP
Sbjct:   185 VVVVNPGTVMGP 196

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

UNIPROTKB|O53454 MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 211 (79.3 bits), Expect = 8.0e-17, P = 8.0e-17
 Identities = 65/205 (31%), Positives = 103/205 (50%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
             ++LV+G +G++G  L   LL +GH VR+  R  S    LP+   LE++ GD+TD      
Sbjct:    16 RVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSL---LPAHPQLEVLQGDITDADVCAA 72

Query:    62 ACFGCHVIFHTAALVEPW----LPDP--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
             A  G   IFHTAA++E      + D    R FAVNV G +N++ A +    V++ +YTSS
Sbjct:    73 AVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSS 131

Query:   116 -FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL-QAASEGLPIVPVYPGVIYG 173
                 +G  +    DE   + ++ F   Y  +K VA++  L Q   +G+    + P  I+G
Sbjct:   132 NSVVMGGQNIAGGDETLPYTDR-FNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG 190

Query:   174 PGKLTTGNLVAKLVRLLFSQHFSLV 198
              G  T   +  KL   +   H  ++
Sbjct:   191 NGDQT---MFRKLFESVLKGHVKVL 212

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA

GO:0004769 "steroid delta-isomerase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0030283 "testosterone dehydrogenase [NAD(P)

GO:0070403 "NAD+ binding" evidence=IDA

TIGR_CMR|GSU_1975 GSU_1975 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 207 (77.9 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 65/184 (35%), Positives = 96/184 (52%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-G----LPSE--GALELVYGDVT 54
             KILV+GA G++G  L  ALL +G+  RA V   S  S G    L  E   +L++  GD+ 
Sbjct:     7 KILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFAGDIR 66

Query:    55 DYRSLVDACFGCHVIFHTAALVE-PW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
             D   + +A  GC V+ H AAL+  P+    P  +   NV+G  NVVQAA+E   V K+++
Sbjct:    67 DPHGVREAMKGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELG-VAKVVH 125

Query:   113 TSSFFALGSTDGY-IADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGV 170
             TS+    G+     I +E+ +  +    + Y  SK  AD+IA+   S    P+  + P  
Sbjct:   126 TSTSEVYGTARFVPITEEHPLQGQ----SPYSASKIGADQIAMSFYSSFDTPVAIIRPFN 181

Query:   171 IYGP 174
              YGP
Sbjct:   182 TYGP 185

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=ISS

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=ISS

WB|WBGene00017429 F13D11.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 201 (75.8 bits), Expect = 7.8e-16, P = 7.8e-16
 Identities = 64/201 (31%), Positives = 94/201 (46%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTD 55
             K+LV+GASG++G      LLK G+ VR  VR      +   I  L  +  LELV  D+ D
Sbjct:     7 KVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLNNKAKVQPIKKLDKKNHLELVEADLLD 66

Query:    56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                   A  GC  + H A+   P + D  R     VEG  NV++A  E   V K++ TSS
Sbjct:    67 STCWKKAVAGCDYVLHVASPF-PIVSD-ERCITTAVEGTMNVLKAIAEDGNVRKLVLTSS 124

Query:   116 FFAL--GSTDGYIADENQVHE-EKYFCTQYERSKAVADKIA---LQAASEG--LPIVPVY 167
               A+  G T   + DE+     E      Y +SK +A+K A   ++   E    P+  + 
Sbjct:   125 CAAVNEGYTQDRVFDEDSWSNLESDMVDCYIKSKTLAEKAAWDFIERLPEDKKFPMTVIN 184

Query:   168 PGVIYGPGKLTTGNLVAKLVR 188
             P +++GP  +T       L+R
Sbjct:   185 PTLVFGPAYITEQGASITLMR 205

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

ZFIN|ZDB-GENE-030131-5673 hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 2.9e-15, P = 2.9e-15
 Identities = 48/162 (29%), Positives = 85/162 (52%)

Query:     4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPSEGALE----LVYGDVTDYRS 58
             +++G  G+LG  L   LL++  +V+ +     ++   L SE   +    ++ GD+T Y  
Sbjct:    12 VITGGCGFLGQHLLRVLLEKKKNVKEIRLFDKNVFPSLQSESTEDVKVVIIQGDITKYED 71

Query:    59 LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
             + +A  G  ++FH A+LV+ W   P +  FAVNV+G +N ++A  E   ++ ++YTSS  
Sbjct:    72 VRNAFLGADLVFHAASLVDVWYKIPEKVIFAVNVQGTENAIKACVEIG-IQYLVYTSSME 130

Query:   118 ALGST---DGYIADENQVHEEKYFCTQYERSKAVADKIALQA 156
              +G     D ++          +    Y +SKA A+KI L+A
Sbjct:   131 VVGPNVKGDEFVRGNEDTPYNIFHEMPYPKSKAAAEKIVLEA 172

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	209
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-72
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	1e-46
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-33
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	5e-30
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	2e-27
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	6e-27
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	6e-27
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-24
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-24
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	4e-24
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	8e-24
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	7e-23
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-20
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	3e-20
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	3e-19
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-19
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	5e-19
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	3e-18
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	4e-18
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	7e-18
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	9e-18
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	2e-17
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	4e-17
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	6e-17
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	1e-16
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	3e-16
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	1e-15
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	2e-15
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	6e-15
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	6e-15
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	1e-14
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-14
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	4e-14
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	4e-14
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	7e-14
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	1e-13
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	2e-13
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	5e-13
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	6e-13
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-12
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	3e-12
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	6e-12
pfam05368	232	pfam05368, NmrA, NmrA-like family	7e-12
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-11
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	2e-11
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	3e-11
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	4e-11
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	4e-11
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-10
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	1e-10
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	3e-10
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	3e-10
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	6e-10
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	1e-09
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	1e-09
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	1e-09
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	1e-09
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	2e-09
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	4e-09
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	4e-09
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	2e-08
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	3e-08
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	3e-08
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	3e-08
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	3e-08
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	5e-08
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	6e-08
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-07
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-07
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	2e-07
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-07
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-07
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	5e-07
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	2e-06
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-05
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	1e-05
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-05
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	1e-05
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	2e-05
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-05
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	3e-05
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	4e-05
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	4e-05
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	7e-05
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	1e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	1e-04
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-04
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-04
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-04
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	3e-04
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	3e-04
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-04
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	3e-04
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	5e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	6e-04
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	8e-04
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	9e-04
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.001
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	0.002
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	0.002
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	0.002
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	0.002
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	0.003
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	0.003
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	0.004
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	0.004

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  221 bits (565), Expect = 3e-72
 Identities = 77/173 (44%), Positives = 100/173 (57%), Gaps = 2/173 (1%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G+LG  L  ALL QG+ VRALVR  SD   L     +E+V GD+TD  SL  A
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDGLP-VEVVEGDLTDAASLAAA 59

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             GC  +FH AA    W  D    +  NVEG +NV+ AA E   V ++++TSS  ALG  
Sbjct: 60  MKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAG-VRRVVHTSSIAALGGP 118

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
                DE     E+ F   Y RSK +A+   L+AA+EGL +V V P  ++GPG
Sbjct: 119 PDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVFGPG 171

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  155 bits (395), Expect = 1e-46
 Identities = 82/189 (43%), Positives = 110/189 (58%), Gaps = 9/189 (4%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK+LV+GA+G++G  +   LL+QG  VR LVR TSD   L      E+V GD+ D  SL 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDV-EIVEGDLRDPASLR 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  GC  +FH AA    W PDP   +A NVEG +N+++AA E   VE+++YTSS   LG
Sbjct: 60  KAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLG 118

Query: 121 -STDGYIADEN-QVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPG-- 175
              DG  ADE      +      Y+RSK +A++ AL+ A+E GLP+V V P    GP   
Sbjct: 119 VRGDGTPADETTPSSLDD-MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI 177

Query: 176 KLT-TGNLV 183
           K T TG ++
Sbjct: 178 KPTPTGRII 186

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  120 bits (303), Expect = 3e-33
 Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 11/181 (6%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+ILV+G +G++G  L   LL  GH VR L R        P    +E V  D+TD   + 
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDR--LRDGLDPLLSGVEFVVLDLTDRDLVD 58

Query: 61  DACFGCH-VIFHTAALVEPWL---PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           +   G    + H AA          DP+ F  VNV+G  N+++AA+    V++ ++ SS 
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSV 117

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
             + G       DE+           Y  SK  A+++    A   GLP+V + P  +YGP
Sbjct: 118 SVVYGDPPPLPIDED--LGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGP 175

Query: 175 G 175
           G
Sbjct: 176 G 176

Length = 314

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score =  112 bits (281), Expect = 5e-30
 Identities = 64/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           K+LV+GA+G++G  L   LL +G  VR  VR     +  PS    EL   D     S  D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN--AENAEPSVVLAELPDID-----SFTD 53

Query: 62  ACFGCHVIFHTAALV---EPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
              G   + H AA V        DP S +  VN E  + + +AA     V++ ++ SS  
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQ-GVKRFVFLSSVK 112

Query: 118 ALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIVPVYPGVIYGPG 175
             G  T G   DE      +     Y RSK  A++  L+  AS+G+ +V + P ++YGPG
Sbjct: 113 VNGEGTVGAPFDETDPPAPQ---DAYGRSKLEAERALLELGASDGMEVVILRPPMVYGPG 169

Query: 176 KLTTGNLVAKLVRLL 190
               GN  A+L+RL+
Sbjct: 170 --VRGNF-ARLMRLI 181

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  104 bits (263), Expect = 2e-27
 Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 20/188 (10%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLP-SEGALELVYGDVTDYR 57
           V+GASG++G  L   LL++G++VRA VR   D      +  L  ++  L+L   D+ DY 
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDYG 62

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS- 115
           S   A  GC  +FH A+ V+    DP        V+G  NV++A  + K+V+++++TSS 
Sbjct: 63  SFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFTSSV 122

Query: 116 ---FFALGSTDGYIADENQ-VHEEKYFCTQYER----SKAVADKIALQAASE-GLPIVPV 166
               +     +G + DE+     +  FC + +     SK +A+K A + A E GL +V V
Sbjct: 123 AAVVWNPNRGEGKVVDESCWSDLD--FCKKTKLWYALSKTLAEKAAWEFAEENGLDLVTV 180

Query: 167 YPGVIYGP 174
            P ++ GP
Sbjct: 181 NPSLVVGP 188

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  104 bits (261), Expect = 6e-27
 Identities = 59/184 (32%), Positives = 84/184 (45%), Gaps = 13/184 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSE---GALELVYGDVTDYR 57
            +LV+GA G++G  L   LL++GH VRAL    S  S GL           + GDV D  
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 58  SLVDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +      C V+FH AAL+        P  +   NV G  NV++AA      +++++TS+
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACV-LYRKRVVHTST 119

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQ---YERSKAVADKIALQ-AASEGLPIVPVYPGVI 171
               G+      DE+  H   Y       Y  SK  AD++A     S GLP+  + P   
Sbjct: 120 SEVYGTAQDVPIDED--HPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 172 YGPG 175
           YGP 
Sbjct: 178 YGPR 181

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  102 bits (256), Expect = 6e-27
 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 13/193 (6%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G +G++G  L   LL++G+ V  L RR    S   + G +    GD+TD  +L   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRR--SESLNTGRIRFHEGDLTDPDALERL 58

Query: 63  CFGC--HVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
                   + H AA   V     DP+ F   NV G   +++AA+    V++ ++ SS   
Sbjct: 59  LAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFVFASSSEV 117

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKL 177
            G        E+         + Y  +K  A+++    A   GL  V +    +YGPG  
Sbjct: 118 YGDVADPPITEDTPL---GPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPGNP 174

Query: 178 TT--GNLVAKLVR 188
                +++  L+R
Sbjct: 175 DPFVTHVIPALIR 187

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 97.7 bits (244), Expect = 1e-24
 Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 24/195 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELV-YGDV 53
            +LV+GA+G++   +   LLK G+ VR  VR  S  + L            LE V   D+
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFA-VNVEGLKNVVQAAKETKTVEKIIY 112
           T   +  +A  G   + H A+      PD         VEG  NV++AAK   +V++++ 
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVVL 120

Query: 113 TSSFFALGSTDGYIADENQVHEEK-----YFCTQ-----YERSKAVADKIA---LQAASE 159
           TSS  A+G  D    D  +V  E+               Y  SK +A+K A   ++    
Sbjct: 121 TSSVAAVG--DPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKP 178

Query: 160 GLPIVPVYPGVIYGP 174
              ++ + PG + GP
Sbjct: 179 KFELITINPGYVLGP 193

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 95.4 bits (238), Expect = 1e-24
 Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 19/168 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           K+LV GA+G +G  +   LL +G+ VRALVR  S    L + GA E+V GD+TD  SL  
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGA-EVVVGDLTDAESLAA 59

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS 121
           A  G   +   A           R  AV+ +G  N++ AAK+   V++ +  SS   +G+
Sbjct: 60  ALEGIDAVISAAGSGG---KGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSS---IGA 112

Query: 122 TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                  E            Y  +K  A+   L+A   GL    V PG
Sbjct: 113 DKPSHPLEALGP--------YLDAKRKAEDY-LRA--SGLDYTIVRPG 149

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 96.2 bits (240), Expect = 4e-24
 Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 22/186 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLPSEGALELVYGDVTD 55
           +LV+GA G++G  L  AL++QG+ VRA V   S       D S    +  +E+V GD+ D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRD 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLP----DPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
             S+  A  GC V+FH AAL+   +P     P  +   NV G  NV+QAA++   VEK++
Sbjct: 61  PDSVRKAMKGCDVVFHLAALIA--IPYSYIAPDSYVDTNVTGTLNVLQAARDLG-VEKVV 117

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYP 168
           +TS+    G T  Y+     + E+     Q  Y  SK  AD++AL    S   P+  + P
Sbjct: 118 HTSTSEVYG-TAQYVP----IDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRP 172

Query: 169 GVIYGP 174
              YGP
Sbjct: 173 FNTYGP 178

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 95.4 bits (237), Expect = 8e-24
 Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 20/191 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPS-EGALELVYGDVTD 55
           +LV+GASG++   +   LL++G+ VRA VR  S +        L +  G LEL   D+TD
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +S  +   GC  +FH A  V     DP+      + G  N ++AA   K+V++ + TSS
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTSS 120

Query: 116 FFALG----STDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQAASE-GLPI 163
             ++     + +G + DE   + E+ F +        Y  SK +A+K A + A E  + +
Sbjct: 121 AGSVLIPKPNVEGIVLDEKSWNLEE-FDSDPKKSAWVYAASKTLAEKAAWKFADENNIDL 179

Query: 164 VPVYPGVIYGP 174
           + V P +  G 
Sbjct: 180 ITVIPTLTIGT 190

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 93.6 bits (233), Expect = 7e-23
 Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 12/202 (5%)

Query: 3   ILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSL 59
           +LV+G SG+ G RL   LL++ G  VR+         +S       +E + GD+TD   +
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN-IEFLKGDITDRNDV 60

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FA 118
             A  G   +FHTAA+V    P    ++ VNV G +NV+ A +    V+K +YTSS    
Sbjct: 61  EQALSGADCVFHTAAIVPLAGPR-DLYWEVNVGGTQNVLDACQRCG-VQKFVYTSSSSVI 118

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIVPVYPGVIYGPGKL 177
            G  + +  DE   +        Y  +KA+A+ I L+A   + L    + P  I+GPG  
Sbjct: 119 FGGQNIHNGDETLPYPPL-DSDMYAETKAIAEIIVLEANGRDDLLTCALRPAGIFGPGDQ 177

Query: 178 TTGNLVAKLVRLLFSQHFSLVF 199
               LV  L           VF
Sbjct: 178 G---LVPILFEWAEKGLVKFVF 196

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 84.0 bits (208), Expect = 1e-20
 Identities = 61/171 (35%), Positives = 79/171 (46%), Gaps = 17/171 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           IL+ GA+G++G  L   LL+QGH V  LVR T  +S    E    +V GD+ D  SL DA
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA-VVEGDLRDLDSLSDA 59

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             G  V+ H A        D   F  V+VEG +NV++AAKE   V+  I+ SS  A G  
Sbjct: 60  VQGVDVVIHLAG----APRDTRDFCEVDVEGTRNVLEAAKEA-GVKHFIFISSLGAYGDL 114

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                            + Y   KA  + +        LP   V PGVIYG
Sbjct: 115 HEETEPSPS--------SPYLAVKAKTEAV---LREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 85.8 bits (213), Expect = 3e-20
 Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 23/204 (11%)

Query: 4   LVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALEL---VYGDVTDYRS 58
           LV+G  G+LG  +   LL++G    VR    R S    L     L++   + GDVTD + 
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSP-ELLEDFSKLQVITYIEGDVTDKQD 59

Query: 59  LVDACFGCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           L  A  G  V+ HTAA+++ +          VNV+G +NV+ A  +   V  ++YTSS  
Sbjct: 60  LRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVLVYTSSME 118

Query: 118 ALGSTDG----YIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI--------VP 165
            +G           DE   +E       Y  SKA+A+K+ L   + G  +          
Sbjct: 119 VVGPNSYGQPIVNGDETTPYEST-HQDPYPESKALAEKLVL--KANGSTLKNGGRLYTCA 175

Query: 166 VYPGVIYGPGKLTTGNLVAKLVRL 189
           + P  I+G G       + +L++ 
Sbjct: 176 LRPAGIFGEGDPFLFPFLVRLLKN 199

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 83.2 bits (206), Expect = 3e-19
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--------SGLPSEGALELVYGDVT 54
           + V+G +G+LG  L   LL+ G  V  LVR  S          +GL ++  + ++ GD+T
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADR-VRVLEGDLT 59

Query: 55  ---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
                      R L         + H AA  +   P     +  N++G ++V++ A    
Sbjct: 60  QPNLGLSAAASRELAG---KVDHVIHCAASYDFQAP-NEDAWRTNIDGTEHVLELAARLD 115

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
             ++  Y S+ +  G+ +G I  E +++  + F   YE+SKA A+++   AA++ +P+  
Sbjct: 116 I-QRFHYVSTAYVAGNREGNI-RETELNPGQNFKNPYEQSKAEAEQLVRAAATQ-IPLTV 172

Query: 166 VYPGVIYGPGKLTTGN 181
             P ++ G  K  TG 
Sbjct: 173 YRPSIVVGDSK--TGR 186

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 80.8 bits (200), Expect = 4e-19
 Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 41/192 (21%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G +G++G  L   LL++GH V  + R                              
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLD---------------------------- 32

Query: 63  CFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                V+ H AALV       +P   F  NV G  N+++AA++   V++ +Y SS    G
Sbjct: 33  -----VVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYASSASVYG 86

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVIYGPG-KLT 178
           S +G   +E          + Y  SK  A+ +      S GLP+V +    +YGPG +  
Sbjct: 87  SPEGLPEEE---ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPR 143

Query: 179 TGNLVAKLVRLL 190
              +V   +R  
Sbjct: 144 LDGVVNDFIRRA 155

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 81.9 bits (203), Expect = 5e-19
 Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 29/206 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG---ALELVYGDVTDYR 57
           M + V GA+G++G  + + L K+G  V    R  +    L   G    +  V  D+ D  
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDE 60

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           S+  A  G  V+ +    +  +      F  V+VEG + + +AAKE   VE++I+ S   
Sbjct: 61  SIRKALEGSDVVINLVGRL--YETKNFSFEDVHVEGPERLAKAAKEAG-VERLIHIS--- 114

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL 177
           ALG      AD N         ++Y RSKA  ++ A++ A     I  V P V++G    
Sbjct: 115 ALG------ADANSP-------SKYLRSKAEGEE-AVREAFPEATI--VRPSVVFGRE-- 156

Query: 178 TTGNLVAKLVRLLFSQHFSLVFFHCQ 203
                + +  +LL    F  +    Q
Sbjct: 157 --DRFLNRFAKLLAFLPFPPLIGGGQ 180

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 81.3 bits (201), Expect = 3e-18
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 34/201 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSD-------ISGLPSEG-------- 44
            +L++GA+G+LG  L   LL++     V  LVR  S+          L S          
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60

Query: 45  -ALELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGL 94
             +E+V GD++         ++  L +       I H  ALV  W+   S     NV G 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENV---DTIVHNGALVN-WVYPYSELRGANVLGT 116

Query: 95  KNVVQAAKETKTVEKIIYTSSFFAL--GSTDGYIADENQVHEEKYFCTQYERSKAVADKI 152
           + V++ A   +  + + Y S+              D+  V         Y +SK VA+ +
Sbjct: 117 REVLRLAASGRA-KPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSKWVAELL 175

Query: 153 ALQAASEGLPIVPVYPGVIYG 173
             +A+  GLP+  V PG I G
Sbjct: 176 VREASDRGLPVTIVRPGRILG 196

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 80.9 bits (200), Expect = 4e-18
 Identities = 58/223 (26%), Positives = 87/223 (39%), Gaps = 41/223 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP---------------SEG 44
             +L++GA+G+LG  L   LL +    V  LVR  SD + L                S  
Sbjct: 1   RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSAD 60

Query: 45  ALELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLK 95
            +E+V GD+           ++ L +      +I H AALV   +   S     NV G  
Sbjct: 61  RVEVVAGDLAEPDLGLSERTWQELAENV---DLIIHNAALVN-HVFPYSELRGANVLGTA 116

Query: 96  NVVQAAKETKTVEKIIYTSSFFALGSTDGY-------IADENQVHEEKYFCTQYERSKAV 148
            V++ A   K  + + Y SS     +                +   +      Y RSK V
Sbjct: 117 EVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLA-GGYGRSKWV 174

Query: 149 ADKIALQAASEGLPIVPVYPGVIYGP---GKLTTGNLVAKLVR 188
           A+K+  +A   GLP+    PG I G    G L T + + +LV 
Sbjct: 175 AEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVL 217

Length = 382

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 79.2 bits (196), Expect = 7e-18
 Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 43/207 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSD-------ISGLPSEGA------- 45
            +L++GA+G+LG  L   LLK+ +  +   LVR   +       I  L   G        
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 46  ---LELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEG 93
              +++V GD++         DY+ L +      VI H  A V  W+         NV G
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEEV---DVIIHNGANVN-WVYPYEELKPANVLG 116

Query: 94  LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSK 146
            K +++ A   K  + + + S+     + +    +     E              Y +SK
Sbjct: 117 TKELLKLAATGKL-KPLHFVSTLSVFSAEE---YNALDDEESDDMLESQNGLPNGYIQSK 172

Query: 147 AVADKIALQAASEGLPIVPVYPGVIYG 173
            VA+K+  +AA+ GLP+  + PG I+G
Sbjct: 173 WVAEKLLREAANRGLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 79.7 bits (196), Expect = 9e-18
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 19/203 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTD 55
           + V+GASGY+   +   LL +G++V+A VR  +D       L  +GA   L+L   D+ +
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S   A  GC  +FHTA+ V   + DP +      ++G  NV+   KET +V+++I TS
Sbjct: 68  ESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTS 127

Query: 115 SFFALGSTDGYIADENQVHEEKYF-----CTQ----YERSKAVADKIALQAASE-GLPIV 164
           S  A+      I + N V +E +F     C +    Y  SK +A+  A + A + G+ +V
Sbjct: 128 STAAVLFRQPPI-EANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMV 186

Query: 165 PVYPGVIYGPGKLTTGNLVAKLV 187
            + PG I GP    T N   +L+
Sbjct: 187 VLNPGFICGPLLQPTLNFSVELI 209

Length = 322

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 17/193 (8%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLP-SEGALELVYGDVTDYR 57
           V  ASGY+G  L   LL +G++V A V++  +      I GL   E  L++   D  DY 
Sbjct: 11  VMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYH 70

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           S++DA  GC  +F        +     +   V V    NV++A  +T T+EK+++TSS  
Sbjct: 71  SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130

Query: 118 ALGSTDGYIADENQVHEEKY----FCTQYERSKAVADKIALQAA-----SEGLPIVPVYP 168
           A+   D  I+ +  V E  +    FC +++   A+A  ++ + A       G+ +V +  
Sbjct: 131 AVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINA 190

Query: 169 GVIYGPGKLTTGN 181
           G++ GP  LT  N
Sbjct: 191 GLLMGPS-LTQHN 202

Length = 297

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 77.6 bits (192), Expect = 4e-17
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 13/186 (6%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDYR 57
           ++LV+G +G++G  L   LL++GH V  L      +  ++     +  ++ + GD+ D  
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLP--EVKPNVKFIEGDIRDDE 58

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +  A  G   +FH AA   V   + DP +   VNV G  N+++AA++   V++ +Y SS
Sbjct: 59  LVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG-VKRFVYASS 117

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA-LQAASEGLPIVPVYPGVIYGP 174
               G       DE+           Y  SK   +    + A   GLP V +    +YGP
Sbjct: 118 SSVYGDPPYLPKDEDHPPNPLS---PYAVSKYAGELYCQVFARLYGLPTVSLRYFNVYGP 174

Query: 175 GKLTTG 180
            +   G
Sbjct: 175 RQDPNG 180

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 76.1 bits (188), Expect = 6e-17
 Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 39/202 (19%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGL-----------PSEGALEL--- 48
           ++GA+G+LG  L   LL+    V+   LVR     S L             +    L   
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 49  --VYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNV 97
             V GD++         D++ L +      VI H AA V  ++   S   A NV G + V
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAE---EVDVIIHNAATVN-FVEPYSDLRATNVLGTREV 116

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE------KYFCTQYERSKAVADK 151
           ++ AK+ K +    + S+ +  G   G + ++    +E            Y +SK +A++
Sbjct: 117 LRLAKQMKKL-PFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQ 175

Query: 152 IALQAASEGLPIVPVYPGVIYG 173
           + ++ A+ GLP+V   P +I G
Sbjct: 176 L-VREAAGGLPVVIYRPSIITG 196

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 24/194 (12%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----------PSEGALELVYGDVT 54
           V+G   +LG  +   LL+ G+SVR  V    D   L           S   +  V  ++T
Sbjct: 58  VTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLT 117

Query: 55  DYRSLVDACFGCHVIFHTAALVEP-WLPDPSRFFA-VNVEGLKNVVQAAKETKTVEKIIY 112
           +  SL +A  GC  +FHT+A V+P  L   ++  A +  +  +NV++A   T++V K ++
Sbjct: 118 EPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVF 177

Query: 113 TSSFFALGSTDGY------IADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GL 161
           TSS  A      Y      + DE    +E  FC      Y   K  A+K A +AA   GL
Sbjct: 178 TSSLLACVWRQNYPHDLPPVIDEESWSDES-FCRDNKLWYALGKLKAEKAAWRAARGKGL 236

Query: 162 PIVPVYPGVIYGPG 175
            +  + P ++ GPG
Sbjct: 237 KLATICPALVTGPG 250

Length = 367

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 75.2 bits (185), Expect = 3e-16
 Identities = 59/228 (25%), Positives = 91/228 (39%), Gaps = 46/228 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
            +L++G  GY G RL  AL K G  V  L         LP    ++ +  DV D   L  
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSGVHV-ILFDIRRPQQELPEG--IKFIQADVRDLSQLEK 57

Query: 62  ACFGCHVIFHTAA------------LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           A  G   +FH A+            L+E           +NV G +N++Q     + V +
Sbjct: 58  AVAGVDCVFHIASYGMSGREQLNRELIE----------EINVRGTENIIQVCVRRR-VPR 106

Query: 110 IIYTSSF-FALGSTDGYIADEN----QVHEEKYFCTQYERSKAVADKIALQAASEGLP-- 162
           +IYTS+F    G       DE+     +         Y R+K++A+++ L+A +  LP  
Sbjct: 107 LIYTSTFNVIFGGQPIRNGDESLPYLPLDL---HVDHYSRTKSIAEQLVLKANNMPLPNN 163

Query: 163 -----IVPVYPGVIYGPGKL-----TTGNLVAKLVRLLFSQHFSLVFF 200
                   + P  IYGPG+          +   L   ++    SLV F
Sbjct: 164 GGVLRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFMFVYGDPKSLVEF 211

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 73.7 bits (181), Expect = 1e-15
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 29/195 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLP-SEGALELVYGDVTD 55
           + V+GASG++G  L   LL++G++VRA VR      +   +  LP +   L L   D+  
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  DA  GC  +FH A  ++    DP +      V G+ ++++A  + KTV +I++TS
Sbjct: 68  EGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS 127

Query: 115 SFFALGSTDGYIADENQ--VHEEKY-----FCTQ-------YERSKAVADKIALQAASE- 159
           S    G+ +    +E+Q  V++E       FC +       Y  SK +A+K A + A+E 
Sbjct: 128 S---AGTVN---VEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN 181

Query: 160 GLPIVPVYPGVIYGP 174
           GL  + + P ++ GP
Sbjct: 182 GLDFISIIPTLVVGP 196

Length = 351

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 73.4 bits (180), Expect = 2e-15
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 18/188 (9%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTDYRS 58
           V G +G+L   L   LL++G++V   VR      + + +  L   G L++   D+TD  S
Sbjct: 14  VIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEES 73

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
                 GC ++FH A  V     DP        ++G+ NV++A  + K+V+++I TSS  
Sbjct: 74  FEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA 133

Query: 118 ALG----STDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASEG-LPIVPV 166
           A+     S  G + +E        +  EK     Y  SK +A+K A + A E  + ++ V
Sbjct: 134 AVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITV 193

Query: 167 YPGVIYGP 174
            P ++ GP
Sbjct: 194 IPTLMAGP 201

Length = 338

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 71.6 bits (176), Expect = 6e-15
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 23/181 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
              V GASG +G  +   L ++G  VR + R  S ++ LP    +E+V  D  D  S++ 
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWLPG---VEIVAADAMDASSVIA 57

Query: 62  ACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           A  G  VI+H A      W      F  +    ++NVV AA+      K++   + +  G
Sbjct: 58  AARGADVIYHCANPAYTRW---EELFPPL----MENVVAAAEA--NGAKLVLPGNVYMYG 108

Query: 121 STDGYIADE---NQVHEEKYFCTQYERSKAVADKIALQAASEG-LPIVPVYPGVIYGPGK 176
              G    E    Q    K       R +A  ++  L A ++G +  + V     YGPG 
Sbjct: 109 PQAGSPITEDTPFQPTTRK------GRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGA 162

Query: 177 L 177
           +
Sbjct: 163 I 163

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 71.6 bits (176), Expect = 6e-15
 Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 18/182 (9%)

Query: 4   LVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           LV G SG+LG  L   LL++G+ +V     R +      S G ++   GD+TD + L  A
Sbjct: 3   LVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQDLEKA 62

Query: 63  --CFGCHVIFHTAALVEPWLPDPSR----FFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
               G +V+FHTA+      PD       ++ VNV+G +NV++A ++   V+K++YTSS 
Sbjct: 63  FNEKGPNVVFHTAS------PDHGSNDDLYYKVNVQGTRNVIEACRKC-GVKKLVYTSSA 115

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYG 173
             +    D    DE+  + +K     Y  +KA+A+K+ L+A     GL    + P  I+G
Sbjct: 116 SVVFNGQDIINGDESLPYPDK-HQDAYNETKALAEKLVLKANDPESGLLTCALRPAGIFG 174

Query: 174 PG 175
           PG
Sbjct: 175 PG 176

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 70.5 bits (173), Expect = 1e-14
 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+GA+GY+GGRL   LL++GH VRALVR    ++  P    + +V GD+ D  SL  A
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAA 60

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
             G    ++   LV         F   +    +N  +AA+    V++IIY       G
Sbjct: 61  LEGIDTAYY---LVHSMGSGGD-FEEADRRAARNFARAARAAG-VKRIIYLGGLIPKG 113

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 34/211 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           KIL++GA+G LG  L   L ++G+ V    R  + +  L           D+TD  ++ +
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKL-----------DLTDPDAVEE 49

Query: 62  ACFGC--HVIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A       VI + AA           DP   + VNV   +N+ +AAKE     ++I+ S+
Sbjct: 50  AIRDYKPDVIINCAAYTRVDKCES--DPELAYRVNVLAPENLARAAKEVGA--RLIHIST 105

Query: 116 --FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
              F  G    Y  +     +       Y +SK + +   L A    L I+      +YG
Sbjct: 106 DYVFD-GKKGPYKEE-----DAPNPLNVYGKSKLLGEVAVLNANPRYL-ILRT--SWLYG 156

Query: 174 PGKLTTGNLVAKLVRLLFSQHFSLVFFHCQI 204
             K    N V  ++RL   +   +   H QI
Sbjct: 157 ELKN-GENFVEWMLRLAAERK-EVNVVHDQI 185

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 69.5 bits (170), Expect = 4e-14
 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 25/193 (12%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALEL------VYGDV 53
           LV+G  G+LG  +   LL++   ++ +  R  D +  P         +       + GD+
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEI--RVLDKAFGPELIEHFEKSQGKTYVTDIEGDI 60

Query: 54  TDYRSLVDACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
            D   L  AC G  V+ HTAA+V+    P+      VNV G + V++A  +   V++++Y
Sbjct: 61  KDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQN-NVKRLVY 119

Query: 113 TSSFFALG-STDGYIADENQVHEEKYFCTQ---YERSKAVADKIALQA----ASEGLPIV 164
           TSS    G +  G     N V +  Y  T    Y  SK +A+ I L A      +G  +V
Sbjct: 120 TSSIEVAGPNFKGRPI-FNGVEDTPYEDTSTPPYASSKLLAENIVLNANGAPLKQGGYLV 178

Query: 165 --PVYPGVIYGPG 175
              + P  IYG G
Sbjct: 179 TCALRPMYIYGEG 191

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score = 69.4 bits (169), Expect = 4e-14
 Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 20/187 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL---PSEGALE---LVYGDVTDY 56
           + V+GA GY+   +   LL++G++V+  VR   D         EG  E   L   D+ DY
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            +L  A  GC  +FHTA+   P   DP +     V G K V+ AA E K V++++ TSS 
Sbjct: 73  EALKAAIDGCDGVFHTAS---PVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSI 128

Query: 117 FALGSTDGYIADENQVHEEKY----FCTQ----YERSKAVADKIALQAASE-GLPIVPVY 167
            A+   D     E  V E  +    FC      Y   K VA++ A + A E G+ +V + 
Sbjct: 129 GAV-YMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 168 PGVIYGP 174
           P ++ GP
Sbjct: 188 PVLVLGP 194

Length = 342

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 68.6 bits (168), Expect = 7e-14
 Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 21/187 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR-ALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+L++GASG++G RL   LL    + R  L+   S  +  PS               +L
Sbjct: 1   MKVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKA--PSGAPRVTQIAGDLAVPAL 58

Query: 60  VDACF--GCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           ++A       V+FH AA+V      D    + VNV+G +N+++A ++     + ++TSS 
Sbjct: 59  IEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFVFTSSL 118

Query: 117 --FALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-----EGLPIVPVYPG 169
             + L   +                + Y   KA+ + + L   S     +G  +    P 
Sbjct: 119 AVYGLPLPNPVTDHTALDPA-----SSYGAQKAMCE-LLLNDYSRRGFVDGRTLRL--PT 170

Query: 170 VIYGPGK 176
           V   PG+
Sbjct: 171 VCVRPGR 177

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 67.3 bits (165), Expect = 1e-13
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 16/118 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G LG  +   LL +  SV ALVR         ++G  E+  GD  D  +L  A
Sbjct: 1   ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGV-EVRQGDYDDPETLERA 59

Query: 63  CFGCHVIF--HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
             G   +     + L +             ++  KN + AAK+   V+ I+Y S+  A
Sbjct: 60  FEGVDRLLLISPSDLEDR------------IQQHKNFIDAAKQ-AGVKHIVYLSASGA 104

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTDYR 57
           V+GASGY+   L   LL++G++V+A VR  +D       L  +GA   L L   ++ +  
Sbjct: 9   VTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEG 68

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           S      GC  +FHTA+     + DP +      V+G  NV+++  +  +V++++ TSS 
Sbjct: 69  SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSM 128

Query: 117 FALG-----STDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GLPIVPV 166
            A+       T   + DE     +  FC +    Y  SK +A++ A + A E G+ +V +
Sbjct: 129 AAVAYNGKPLTPDVVVDETW-FSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTI 187

Query: 167 YPGVIYGPGKLTTGNLVAKLV 187
            P ++ GP    T N  A+ +
Sbjct: 188 NPAMVIGPLLQPTLNTSAEAI 208

Length = 322

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 66.4 bits (162), Expect = 5e-13
 Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 28/213 (13%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGA--LELVYGDVTDYRSLV 60
           V+GA+GY+G  L   LL++G++V A +R  +    L S  +    L L   D+ +  S  
Sbjct: 15  VTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD 74

Query: 61  DACFGCHVIFHTAALVEPWLPD---------PSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           +A  GC  +FH AA +E  +            S+     ++G  NV+++  ++KTV++++
Sbjct: 75  EAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVV 134

Query: 112 YTSSFFALGSTDG-----YIADEN-QVHEEKYFCTQ-----YERSKAVADKIALQAASE- 159
           +TSS   L + D       + DE  Q   +  + T+     Y  SK + ++ A + A E 
Sbjct: 135 FTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN 194

Query: 160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFS 192
           G+ +V V    + GP    T + V   +++L S
Sbjct: 195 GIDLVSVITTTVAGP--FLTPS-VPSSIQVLLS 224

Length = 353

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 65.3 bits (159), Expect = 6e-13
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+GA+G++GG +   LL +GH VRA VR     + L   G +E+V GD+ D +SLV
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL--AGGVEVVLGDLRDPKSLV 58

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +   + L++        F AV V  +    +AA     V+  +  S   A  
Sbjct: 59  AGAKGVDGVLLISGLLDG----SDAFRAVQVTAVVRAAEAAGA--GVKHGVSLSVLGADA 112

Query: 121 STDGYIADENQVHEE 135
           ++   +A      E 
Sbjct: 113 ASPSALARAKAAVEA 127

Length = 275

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 28/183 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           I V GA+G  G RL   LL +GH V AL R  S          +  V  D+ D   L +A
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKA----PAPGVTPVQKDLFDLADLAEA 56

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             G   +            D         +G+K+++ AA     V +I+  S+       
Sbjct: 57  LAGVDAVVDAFG---ARPDDS--------DGVKHLLDAAARAG-VRRIVVVSAAGLYRDE 104

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY----GPGKLT 178
            G    ++           Y R+KA A++  L+A   GL    V PG ++       ++ 
Sbjct: 105 PGTFRLDD-----APLFPPYARAKAAAEE-LLRA--SGLDWTIVRPGALFDEEGETYEIG 156

Query: 179 TGN 181
           T  
Sbjct: 157 TEG 159

Length = 182

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 63.5 bits (155), Expect = 3e-12
 Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 22/201 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-GDVTDYRSL 59
           MK+ V+GA+G++G  +   L+  GH V  L R  SD      E A   V+ GD+ D   L
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVVGLAR--SDAGAAKLEAAGAQVHRGDLEDLDIL 58

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFA---VNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             A      + H A        D   F     V+   ++ + +A + T   + +IYTS  
Sbjct: 59  RKAAAEADAVIHLAF-----THDFDNFAQACEVDRRAIEALGEALRGTG--KPLIYTSGI 111

Query: 117 FALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI-VPVYPGVIYGPG 175
           + LG T G   D     EE         ++AV++  AL+ A  G+   V   P V++G G
Sbjct: 112 WLLGPTGGQEED-----EEAPDDPPTPAARAVSEAAALELAERGVRASVVRLPPVVHGRG 166

Query: 176 KLTTGNLVAKLVRLLFSQHFS 196
                  V  L+ +   +  S
Sbjct: 167 DHG---FVPMLIAIAREKGVS 184

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score = 63.1 bits (153), Expect = 6e-12
 Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 21/208 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTD 55
           + V+GASGY+   +   LL +G+++ A VR   D       L  +GA   L+L   D+ D
Sbjct: 8   VCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVN--VEGLKNVVQAAKETKTVEKIIYT 113
             S   A  GC  +FHTA+ V   +    +   +N  V G  NV++   +  +V+++I T
Sbjct: 68  EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILT 127

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQ---------YERSKAVADKIALQAASEG-LPI 163
           SS  A+ + +  +   N V +E +F            Y  SK +A+  A + A +  + +
Sbjct: 128 SSMAAVLAPETKLG-PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDL 186

Query: 164 VPVYPGVIYGPGKLTTGNL-VAKLVRLL 190
           + + PG++ GP    T N  VA +V L+
Sbjct: 187 IVLNPGLVTGPILQPTLNFSVAVIVELM 214

Length = 325

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 61.9 bits (151), Expect = 7e-12
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 15/117 (12%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDIS-GLPSEGALELVYGDVTDYRSLV 60
           ILV GA+GY GG +  A LK GH VRALVR   S+++  L + G  ELV GD+ D+ SLV
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGV-ELVEGDLDDHESLV 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           +A  G  V+F               + +  +E  K +  AAKE   V+  I  S F 
Sbjct: 60  EALKGVDVVFSVTGF----------WLSKEIEDGKKLADAAKEAG-VKHFIP-SEFG 104

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 15/122 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTD- 55
            +IL++G +G+LG  LC  LL+ GH V  +      R  +I  L      E +  DVT+ 
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTEP 60

Query: 56  YRSLVDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
               VD       I+H A    P  +  +P +    NV G  N++  AK      +++  
Sbjct: 61  LYLEVD------QIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA--RVLLA 112

Query: 114 SS 115
           S+
Sbjct: 113 ST 114

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 18/128 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTD 55
           + L++G +G  G  L   LL++G+ V  +VRR+S  +         ++  + L YGD+TD
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGDLTD 60

Query: 56  YRSL------VDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
             SL      V        I+H AA   V+    DP     VN  G  N+++A +     
Sbjct: 61  SSSLRRAIEKVRP----DEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLD 116

Query: 108 EKIIYTSS 115
            +    SS
Sbjct: 117 ARFYQASS 124

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 3   ILVSGASGYLGGRLCHALLK-QGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLV 60
           ILV GA+G  GG +  ALLK  G  VRAL R   S  +   +   +E+V GD+ D  SL 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESLE 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
            A  G + +F      E    D        +   KNVV AAK    V+  +++S
Sbjct: 61  AALKGVYGVFLVTDFWEAGGED-------EIAQGKNVVDAAKRAG-VQHFVFSS 106

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 60.0 bits (146), Expect = 4e-11
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 8/104 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G +G ++   LL+ G  VRALVR     + L + GA E+V GD+ D   L  A
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGA-EVVVGDLDDPAVLAAA 59

Query: 63  CFGCHVIFHTA-----ALVEPWLPDPSRFFAVNVE--GLKNVVQ 99
             G   +F  A     A   P     +  FA  +   G+K VV 
Sbjct: 60  LAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVN 103

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+LV+G +GY+G      LLK GH V  L          L      +   GD+ D R+L
Sbjct: 1   MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQF-KFYEGDLLD-RAL 58

Query: 60  VDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           + A F  +    + H AA   V   + +P +++  NV G  N+++A  +T  V+K I++S
Sbjct: 59  LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSS 117

Query: 115 S 115
           +
Sbjct: 118 T 118

Length = 329

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 33/206 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISG-----LPSEGALELVYGD 52
           M++L++G +G++G  L    LKQG  V     L+RR S  +         +G +  V+GD
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEP---W-LPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
           + +   L D      +I HTAA  +P        P   F  N  G  NV++AA++     
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAA--QPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNA 118

Query: 109 KIIYTSS---FFALGSTDGYIADENQVH---EEKY------------FCTQYERSKAVAD 150
             I+TS+   +  L +       E +     E                 + Y  SK  AD
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178

Query: 151 KIALQ-AASEGLPIVPVYPGVIYGPG 175
           +   +     GL  V    G + GP 
Sbjct: 179 QYVQEYGRIFGLKTVVFRCGCLTGPR 204

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 59.7 bits (144), Expect = 1e-10
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 12/115 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I V+GASG LG  L   LL QGH V  + R   D    PS  + + +  D+ D  ++ 
Sbjct: 1   MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD--SWPS--SADFIAADIRDATAVE 56

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            A  G  V+ H A     W+   +    +N++G  NV++A  ET T  +I++TSS
Sbjct: 57  SAMTGADVVAHCA-----WVRGRND--HINIDGTANVLKAMAETGT-GRIVFTSS 103

Length = 854

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSE---GALELVYGDVTDYR 57
           KILV+G +GY+G      LL+ GH V  L          LP       +  V GD+ D R
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRD-R 59

Query: 58  SLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
            L+D  F  H    + H A L  V   +  P +++  NV G  N+++A ++   V+K I+
Sbjct: 60  ELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG-VKKFIF 118

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKI--ALQAASEGLPIV 164
           +SS    G           + E+        Y RSK ++++I   LQ A      V
Sbjct: 119 SSSAAVYGEP-----SSIPISEDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYV 169

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 57.9 bits (141), Expect = 3e-10
 Identities = 48/186 (25%), Positives = 70/186 (37%), Gaps = 36/186 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           +LV+G  G +G  LC  +LK               L     ++    ++  L    GDV 
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGDVR 60

Query: 55  DYRSLVDAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           D   L  A    G   +FH AA     LVE    +P      NV G +NV +AA E   V
Sbjct: 61  DRERLERAMEQHGVDTVFHAAALKHVPLVE---YNPMEAIKTNVLGTENVAEAAIENG-V 116

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
           EK +  S+  A+  T+   A                 +K +A+K+   A  E       +
Sbjct: 117 EKFVLISTDKAVNPTNVMGA-----------------TKRLAEKLFQAANRESGSGKTRF 159

Query: 168 PGVIYG 173
             V +G
Sbjct: 160 SVVRFG 165

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 56.9 bits (138), Expect = 6e-10
 Identities = 47/185 (25%), Positives = 65/185 (35%), Gaps = 35/185 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL+ G + ++G  L   LL  GH V    R  +       EG   +V GD  D  +L 
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD--LPEGVEHIV-GDRNDRDALE 57

Query: 61  DACFG------CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +   G         I +T   VE  L      F                   V++ I+ S
Sbjct: 58  ELLGGEDFDVVVDTIAYTPRQVERAL----DAFK----------------GRVKQYIFIS 97

Query: 115 SFFALGSTDGYIADENQVHEEKYFCT----QYERSKAVADKIALQAASEGLPIVPVYPGV 170
           S          I +   + E           Y R K  A+ + ++AA    P   V P  
Sbjct: 98  SASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAA--AFPYTIVRPPY 155

Query: 171 IYGPG 175
           IYGPG
Sbjct: 156 IYGPG 160

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 33/196 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV----------RRTSDISGLPSEGALELVY 50
           MKILV+G +G++G      LL +    + +               D+S  P       V 
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPR---YRFVK 57

Query: 51  GDVTDYRSLVDACFG---CHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           GD+ D   LVD  F       + H AA   V+  + DP  F   NV G   +++AA++  
Sbjct: 58  GDICDAE-LVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYG 116

Query: 106 TVEKIIYTSSFFALGSTD---GYIADENQVHEEKYFC--TQYERSKAVADKIALQAA-SE 159
            V++ ++        STD   G + D+ +  E       + Y  SKA AD +      + 
Sbjct: 117 -VKRFVHI-------STDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYHRTY 168

Query: 160 GLPIVPVYPGVIYGPG 175
           GLP+V       YGP 
Sbjct: 169 GLPVVITRCSNNYGPY 184

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 18/123 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQ----GHSVRALVRRTSDISGLPSEGA-LELVYGDVTDY 56
           KI + GA+G  G     A++++    GH V ALVR   D + LP+E   L++V GDV D 
Sbjct: 1   KIAIIGATGRTG----SAIVREALARGHEVTALVR---DPAKLPAEHEKLKVVQGDVLDL 53

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             + +A  G   +   +AL       P     ++ EG +N+V A K      ++I     
Sbjct: 54  EDVKEALEGQDAVI--SALGTRNDLSP---TTLHSEGTRNIVSAMKAAGVK-RLIVVGGA 107

Query: 117 FAL 119
            +L
Sbjct: 108 GSL 110

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 20/183 (10%)

Query: 3   ILVSGASGYLGGRLCHALLK--QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-L 59
           ILV+GA+G LG  L   L    +   V  L RR        S   +E V  D+ D  +  
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPP----GSPPKVEYVRLDIRDPAAAD 56

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           V        + H A +++P   D +    +NV+G +NV+ A      V +++ TSS    
Sbjct: 57  VFREREADAVVHLAFILDP-PRDGAERHRINVDGTQNVLDACAAAG-VPRVVVTSSVAVY 114

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-------ASEGLPIVPVYPGVIY 172
               G   D      E              DK  ++            L +  + P  I 
Sbjct: 115 ----GAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATIL 170

Query: 173 GPG 175
           GPG
Sbjct: 171 GPG 173

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 8/134 (5%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDYRS 58
           ILV+G +G++G  L   LL++G+ V  +      R  +I       A   V  D+ D   
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTAD 61

Query: 59  LVDACFGCHVIFHTAALVEPWL--PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            V A      +FH AA  +  L   DP      NV    NV++A +    V++I++ SS 
Sbjct: 62  KV-AKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKRIVFASSS 119

Query: 117 FALGSTDGYIADEN 130
              G        E+
Sbjct: 120 TVYGEAKVIPTPED 133

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 56.0 bits (136), Expect = 2e-09
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 32/133 (24%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVYG 51
           K+LV+G +GY+G      LL+ G+ V          R  + R   I        +E   G
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIR-------IEFYEG 53

Query: 52  DVTDYRSLVDACFGCH---VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAAK 102
           D+ D R+ +D  F  H    + H AAL      V+     P +++  NV G  N+++A +
Sbjct: 54  DIRD-RAALDKVFAEHKIDAVIHFAALKAVGESVQ----KPLKYYDNNVVGTLNLLEAMR 108

Query: 103 ETKTVEKIIYTSS 115
               V+  +++SS
Sbjct: 109 AHG-VKNFVFSSS 120

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 34/195 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  L    L     V A  R                   D+TD  +++
Sbjct: 1   MKILITGANGQLGTELR-RALPGEFEVIATDRAE----------------LDITDPDAVL 43

Query: 61  DACFGCH--VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           +        V+ + AA   V+    +P   FAVN  G +N+ +AA E     ++++ S+ 
Sbjct: 44  EVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA--RLVHISTD 101

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           +   G   G   + +  +        Y RSK   +  A++AA     I+      +YG  
Sbjct: 102 YVFDGEKGGPYKETDTPNPLNV----YGRSKLAGE-EAVRAAGPRHLILRT--SWVYGEY 154

Query: 176 KLTTGNLVAKLVRLL 190
                N V  ++RL 
Sbjct: 155 ---GNNFVKTMLRLA 166

Length = 281

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 40/169 (23%), Positives = 61/169 (36%), Gaps = 28/169 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           KI ++GA+G LGG +  ALL   G +V  L R +S  S       +++V  D   + SLV
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESLV 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +                           ++ AA     V++ I   S F + 
Sbjct: 61  AALKGVDAVISALGGAAI-------------GDQLKLIDAAIAAG-VKRFI--PSEFGVD 104

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                      + +EK         + V     L+A + GLP   V  G
Sbjct: 105 YDRIGALPLLDLFDEK---------RDVRR--YLRAKNAGLPWTYVSTG 142

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 13/119 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+L++G +G +G  L   LL++GH V  +    T     LP    L +V G + D ++L
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIAD-KAL 59

Query: 60  VDACFGC----HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           VD  FG      V+   AA  +P  W  D       NV G  NVVQAAK+   V+++IY
Sbjct: 60  VDKLFGDFKPDAVVHTAAAYKDPDDWYEDT----LTNVVGGANVVQAAKKA-GVKRLIY 113

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 20/131 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTSDISGLPSEGALE--LVYGDVTDYR 57
           +IL++G  G +G  L   L K+ G  +V A     SDI   P+   L     Y DV D++
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIA-----SDIRKPPAHVVLSGPFEYLDVLDFK 55

Query: 58  SLVDAC--FGCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           SL +         I H AAL+    E    +P   + VN+ GL NV++ A+E     +I 
Sbjct: 56  SLEEIVVNHKITWIIHLAALLSAVGEK---NPPLAWDVNMNGLHNVLELAREHN--LRIF 110

Query: 112 YTSSFFALGST 122
             S+  A G T
Sbjct: 111 VPSTIGAFGPT 121

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 44/186 (23%), Positives = 68/186 (36%), Gaps = 36/186 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           +LV+G  G +G  LC  +LK               L     ++     E  L    GDV 
Sbjct: 253 VLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVR 312

Query: 55  DYRSLVDA--CFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           D   +  A       ++FH AA     LVE    +P      NV G +NV +AA +   V
Sbjct: 313 DRDRVERAMEGHKVDIVFHAAALKHVPLVE---YNPEEAIKTNVLGTENVAEAAIKNG-V 368

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
           +K +  S+  A+  T+   A                 +K +A+K+   A          +
Sbjct: 369 KKFVLISTDKAVNPTNVMGA-----------------TKRLAEKLFQAANRNVSGTGTRF 411

Query: 168 PGVIYG 173
             V +G
Sbjct: 412 CVVRFG 417

Length = 588

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL--------VRRTSD-ISGLPSEGALELVYG 51
           MKILV+GA+G++G  +   LL++G  V  +        VR     +  L   G  + V G
Sbjct: 1   MKILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 52  DVTDYRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKT 106
           D+ D R  +   F  H    + H AA   V   L +P  +   N+ G  N+++  +    
Sbjct: 61  DLED-REALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFG- 118

Query: 107 VEKIIY--TSSFFAL 119
           V+ ++Y  +SS + L
Sbjct: 119 VKHLVYASSSSVYGL 133

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M +LV GA+G LG ++    L +G+ VR LVR     S L   GA ELVYGD++   +L 
Sbjct: 1   MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGA-ELVYGDLSLPETLP 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            +  G   I   A+   P   D      ++ +G   +++AAK  K +++ I+ S  
Sbjct: 60  PSFKGVTAII-DASTSRP--SDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSIL 111

Length = 317

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 43/134 (32%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           ILV+G +G +G  L   +LK G             L     ++        L  + GDV 
Sbjct: 5   ILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIGDVR 64

Query: 55  DYRSL--VDACFGCHVIFHTAAL--VEPWLPD-PSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D   L       G  ++FH AAL  V P + D P      NV G KNV+ AA E   VEK
Sbjct: 65  DKERLRRAFKERGPDIVFHAAALKHV-PSMEDNPEEAIKTNVLGTKNVIDAAIENG-VEK 122

Query: 110 IIYTSSFFALGSTD 123
                 F  + STD
Sbjct: 123 ------FVCI-STD 129

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 51.2 bits (123), Expect = 6e-08
 Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 23/186 (12%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +L+ G  GYLG RL   LL QG  V    R    ++     G   L   D+T    L D 
Sbjct: 1   VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLA-ADLTQPGLLADV 58

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
               H++           P    +      GL+ ++ A  +   V+++IY SS    G  
Sbjct: 59  ---DHLVISLP-------PPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ 108

Query: 123 DGYIADENQVHEEKYFCT-QYERSKAV--ADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
            G      +  +E        E  +A+  A++  L   S+   I  +    IYGPG+   
Sbjct: 109 QG------EWVDETSPPNPSTESGRALLEAEQALLALGSKPTTI--LRLAGIYGPGRHPL 160

Query: 180 GNLVAK 185
             L   
Sbjct: 161 RRLAQG 166

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 41/198 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--------DISGLPSEGALELVYGD 52
              LV+GAS  +G  +  AL ++G  V    RR+                 G    V  D
Sbjct: 6   KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAAD 65

Query: 53  VTDYRSLVDACF--------GCHVIFHTAALVEPWLP-------DPSRFFAVNVEGLKNV 97
           V+D    V+A             ++ + A +  P  P       D  R   VN+ G   +
Sbjct: 66  VSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLL 125

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIA 153
            +AA      ++I+  SS   LG   G  A              Y  SKA    +   +A
Sbjct: 126 TRAALPLMKKQRIVNISSVAGLGGPPGQAA--------------YAASKAALIGLTKALA 171

Query: 154 LQAASEGLPIVPVYPGVI 171
           L+ A  G+ +  V PG I
Sbjct: 172 LELAPRGIRVNAVAPGYI 189

Length = 251

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 42/206 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           IL++G +G++G  L   L K+GH V  L R        P  GA     G         D+
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRS-------PPPGANTKWEGYKPWAGEDADS 53

Query: 63  CFGCHVIFHTAA---LVEPWLPD------PSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
             G   + + A      + W  +       SR     ++  + +V+A    +   K+  +
Sbjct: 54  LEGADAVINLAGEPIADKRWTEERKQEIRDSR-----IDTTRLLVEAIAAAEQKPKVFIS 108

Query: 114 SSFFALG----STDGYIADENQVHEEKYF---CTQYERSKAVADKIALQAASEGLPIVPV 166
           +S  A+G    S D    +E+    + +    C  +E       + A  A   G  +V +
Sbjct: 109 AS--AVGYYGPSEDREYTEEDSPAGDDFLAELCRDWE-------EAAQAAEDLGTRVVLL 159

Query: 167 YPGVIYGPGKLTTGNLVAKLVRLLFS 192
             G++ GP     G  +AK+  L F 
Sbjct: 160 RTGIVLGPK----GGALAKM-LLPFR 180

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 33/172 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
           M++LV+G SGY+G   C  LL+ GH V          R+++     + G         V 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG----KHPTFVE 56

Query: 51  GDVTDYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           GD+ +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +   
Sbjct: 57  GDIRN-EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN 115

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI 152
            V+ +I++SS    G       D+ ++   + F T      Y +SK + ++I
Sbjct: 116 -VKNLIFSSSATVYG-------DQPKIPYVESFPTGTPQSPYGKSKLMVEQI 159

Length = 338

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++L+ G +G++G  L  ALL++G  VR   R           G ++ + GD  +   L  
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYE--LPLGGVDYIKGDYENRADLES 58

Query: 62  ACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A  G   + H A+   P     +P      NV     +++A      + KII+ SS
Sbjct: 59  ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAG-IGKIIFASS 113

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 20/139 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA--LELVYGDVTDYRSL- 59
           +L++G S  +G  L  AL  QG+ V A  R    +  L       LE++  DVTD  S+ 
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESIK 62

Query: 60  -----VDACFGCH-VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KE 103
                V   FG   V+ + A            + +    F VNV G   V +A     ++
Sbjct: 63  AAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRK 122

Query: 104 TKTVEKIIYTSSFFALGST 122
             +  +I+  SS   L  T
Sbjct: 123 QGS-GRIVNVSSVAGLVPT 140

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI + GASG  G R+    LK+GH V A+VR  S ++       L+    D+ D  SL 
Sbjct: 1   MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQ---KDIFDLTSLA 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
               G   +            D     + ++E L   ++ A   +
Sbjct: 58  SDLAGHDAVISA---FGAGASDNDELHSKSIEALIEALKGAGVPR 99

Length = 211

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 21/190 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV--------RRTSDISGLPSEGALELVYGD 52
           MKILV+G +G++G      +L +      +            + ++ +        V GD
Sbjct: 1   MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLEN-LADVEDSPRYRFVQGD 59

Query: 53  VTDYRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
           + D   +      +    + H AA   V+  +  P+ F   NV G   +++AA++     
Sbjct: 60  ICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKF 119

Query: 109 KIIYTSS---FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIV 164
           +  + S+   +  LG  D    +    +      + Y  SKA +D +      + GLP  
Sbjct: 120 RFHHISTDEVYGDLGLDDDAFTETTPYNPS----SPYSASKAASDLLVRAYVRTYGLPAT 175

Query: 165 PVYPGVIYGP 174
                  YGP
Sbjct: 176 ITRCSNNYGP 185

Length = 340

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 2  KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE 43
          KI+++G +G++G  L   L   GH V  L RR     GL   
Sbjct: 1  KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAEV 42

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 14/121 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVT 54
           K+LV+G +G+ G  L   LL+ G  V      + D    P+          +E  +GD+ 
Sbjct: 6   KVLVTGHTGFKGSWLSLWLLELGAEVYGY---SLDPPTSPNLFELLNLAKKIEDHFGDIR 62

Query: 55  DYRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           D   L  A   F   ++FH AA  LV     DP   F  NV G  N+++A +   +V+ +
Sbjct: 63  DAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAV 122

Query: 111 I 111
           +
Sbjct: 123 V 123

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVT 54
            +LV GA+GY+G  +   L+++G++V A+ R  S I G   +          E+V+GDVT
Sbjct: 62  TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVT 121

Query: 55  DYRSLVDACF 64
           D  SL    F
Sbjct: 122 DADSLRKVLF 131

Length = 390

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 52/168 (30%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG---HSVRALVR---------------RTSDISGLPS 42
             +L++GA+G+LG  L   LL+       +  L+R               +        +
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60

Query: 43  EGALEL-----VYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFA 88
              L       + GD++         D ++L++     ++I H AA V         F  
Sbjct: 61  LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEE---VNIIIHCAATV--------TFDE 109

Query: 89  -------VNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADE 129
                  +NV G   +++ AK  K ++  ++ S+ +   + D  + +E
Sbjct: 110 RLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYV--NGDRQLIEE 155

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 25/161 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDYR 57
           IL++G +G  G      LL+  +  + ++      +  ++        L    GDV D  
Sbjct: 7   ILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKE 66

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            L  A  G   + H AAL  V     +P      N+ G +NV+ AA +   V++++    
Sbjct: 67  RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAID-NGVKRVV---- 121

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA 156
             AL STD      N           Y  +K  +DK+ + A
Sbjct: 122 --AL-STDKAANPIN----------LYGATKLASDKLFVAA 149

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVT 54
           ++LV+G +G+ G  L   L + G  V        D    P+       +  +    GD+ 
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSL---DPPTNPNLFELANLDNKISSTRGDIR 62

Query: 55  DYRSLVDACFGCH--VIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           D  +L +A       ++FH AA  LV     DP   F  NV G  N+++A +ET +V+ +
Sbjct: 63  DLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAV 122

Query: 111 IYTSS 115
           +  +S
Sbjct: 123 VNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 35/196 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSL 59
           ILV+GA+G LG  L   L ++G  V AL R                   D+TD     +L
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVALDRPE----------------LDLTDPEAVAAL 44

Query: 60  VDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           V       V+ + AA   V+    +P   +AVN  G  N+ +A         +I+ S+ +
Sbjct: 45  VRE-ARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGA--PLIHISTDY 101

Query: 118 AL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK 176
              G+  G   +++           Y R+K   ++ A+ AA+    I+      +YG   
Sbjct: 102 VFDGAKGGPYREDDPTGPLNV----YGRTKLAGEQ-AVLAANPRHLILRT--AWVYGEYG 154

Query: 177 LTTGNLVAKLVRLLFS 192
               N V  ++RL   
Sbjct: 155 ---NNFVKTMLRLAAE 167

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLPSEG--ALELVY 50
           K+ L++G +G  G  L   LL++G+ V  + RR+S  +         P      L L Y
Sbjct: 2  GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHY 61

Query: 51 GDVTDYRSLV 60
          GD+TD  +L+
Sbjct: 62 GDLTDSSNLL 71

Length = 345

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVR---RTSDISGLPSEGALELVYGDVTDYRS 58
           +L++G +G  G  +    L      +R   R   +  D+    +   L+   GDV DYRS
Sbjct: 7   LLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVRDYRS 66

Query: 59  LVDACFGCHVIFHTAALVEPWLPD----PSRFFAVNVEGLKNVVQAA 101
           +++A  G   I+H AAL +  +P     P      NV G +NV++AA
Sbjct: 67  ILNATRGVDFIYHAAALKQ--VPSCEFHPMEAVKTNVLGTENVLEAA 111

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 60/232 (25%), Positives = 93/232 (40%), Gaps = 49/232 (21%)

Query: 2    KILVSGASGYLGGRLCHALLKQGHS----VRALVRRTSDISGL-----PSEG-------- 44
             + ++GA+G+LG  +   LL +  +    V A VR  S+ +GL                 
Sbjct: 973  TVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEW 1032

Query: 45   --ALELVYGDV---------TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEG 93
               +E+V GD+           +  L +      VI H  ALV  W+   S+    NV G
Sbjct: 1033 ASRIEVVLGDLSKEKFGLSDEKWSDLTNEV---DVIIHNGALVH-WVYPYSKLRDANVIG 1088

Query: 94   LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE---------------KYF 138
              NV+    E K  ++  + SS  AL  T+ Y+   +++ +                K  
Sbjct: 1089 TINVLNLCAEGKA-KQFSFVSSTSAL-DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGL 1146

Query: 139  CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLL 190
             T Y +SK VA+ I  +A   GL    V PG + G  K    N    L+R+L
Sbjct: 1147 GTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRML 1198

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS 35
          IL++G +G +G  L   L K GH V  L RR  
Sbjct: 1  ILITGGTGLIGRALTARLRKGGHQVTILTRRPP 33

Length = 297

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           I V+GA+G  GG +   LL +G   VRA+VR     + L  +G  E+  GD      L  
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATLADQGV-EVRQGDYNQPELLQK 59

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           A  G   +F    +  P   +        ++  KNV  AA+     + I  T   FA 
Sbjct: 60  AFAGASKLF---IITGPHYDNTLE-----IKQGKNVADAARRAGV-KHIYSTGYAFAE 108

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 22/134 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-------ISGLPSEGA-LELVYGDVT 54
           +L++G +G LG  L   L  +G     LV R          ++ L + GA + +   DV 
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDVA 62

Query: 55  DYRSL------VDACFGC-HVIFHTAALVEPWLP---DPSRF---FAVNVEGLKNVVQAA 101
           D  +L      + A  G    + H A +++        P RF    A  V G  N+ +  
Sbjct: 63  DRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHELT 122

Query: 102 KETKTVEKIIYTSS 115
           ++   +   +  SS
Sbjct: 123 RDLD-LGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 48/196 (24%), Positives = 69/196 (35%), Gaps = 59/196 (30%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+G SG +GG              A+ R       L S G+ +++   V   R     
Sbjct: 1   VLVTGGSGGIGG--------------AIARW------LASRGSPKVL---VVSRRD---- 33

Query: 63  CFGCHVIFHTAALVEPWLPD------PSRFFAVNVEGLKNVVQAAKE---TKTVEKIIYT 113
                V+ H AA+++             R    NV G + +++AA+E    K + + I  
Sbjct: 34  -----VVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILI 88

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE----GLPIVPVYPG 169
           SS   L    G                 Y  SKA  D +A Q ASE    GLP   V  G
Sbjct: 89  SSVAGLF---GAPGLGG-----------YAASKAALDGLAQQWASEGWGNGLPATAVACG 134

Query: 170 VIYGPGKLTTGNLVAK 185
              G G         +
Sbjct: 135 TWAGSGMAKGPVAPEE 150

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 25/150 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVT---DYR 57
            L++G    LG  L    + +G  V  L R    ++ L ++   A+  V GDV    D  
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSLADNE 66

Query: 58  SLVD---ACFGCHVIF--------HTAALVE-PWLPDPSRF---FAVNVEGLKNVVQAA- 101
             V      FG    F        ++ +LV+ P       F   F +NV+G     +AA 
Sbjct: 67  RAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGAKAAL 126

Query: 102 -KETKTVEKIIYT---SSFFALGSTDGYIA 127
                T   +I+T   + F+  G    Y A
Sbjct: 127 PALYATEGSVIFTVSNAGFYPGGGGPLYTA 156

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 6/128 (4%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTD-YRSL 59
            + V+GA+G  G R+   LL +G +V+A VR        LP + +L++V  DVT+    L
Sbjct: 19  TVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKL 78

Query: 60  VDACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           V+A       +         +  DP   + V+  G  N+V+A ++   V + I  SS   
Sbjct: 79  VEAIGDDSDAVICATGFRRSF--DPFAPWKVDNFGTVNLVEACRK-AGVTRFILVSSILV 135

Query: 119 LGSTDGYI 126
            G+  G I
Sbjct: 136 NGAAMGQI 143

Length = 251

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 27/207 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           +IL++GA+G LG  L   L  +G  V AL R   D++    E    L+     D      
Sbjct: 1   RILITGANGQLGRELVQQLSPEGRVVVALTRSQLDLTDP--EALERLLRAIRPD------ 52

Query: 62  ACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
                  + +TAA   V+    DP + FAVN    +N+ +AA         I T   F  
Sbjct: 53  ------AVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDG 106

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
                Y  +++  +        Y +SK +A + A++AA     IV      +YG G    
Sbjct: 107 EGKRPY-REDDATNPLNV----YGQSK-LAGEQAVRAAGPNALIVRT--SWLYGGG--GG 156

Query: 180 GNLVAKLVRLLFSQHFSLVFFHCQITC 206
            N V  ++RL   +   L     QI  
Sbjct: 157 RNFVRTMLRLA-GRGEELRVVDDQIGS 182

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 19/124 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           + LV+GA G++G  L   L  +GH VR    ++ +    P++   E    D+ +  + + 
Sbjct: 2   RALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTD-DDEFHLVDLREMENCLK 60

Query: 62  ACFGCHVIFHTAALVEPWLPD----------PSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           A  G   +FH AA       D           +     N     N+++AA+    VE+ +
Sbjct: 61  ATEGVDHVFHLAA-------DMGGMGYIQSNHAVIMYNNTLINFNMLEAARING-VERFL 112

Query: 112 YTSS 115
           + SS
Sbjct: 113 FASS 116

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 40/164 (24%), Positives = 59/164 (35%), Gaps = 40/164 (24%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA G++G  L   L +Q         R SD S L                    
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKDDDIFFYDRESDESELD------------------- 41

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           D   G   IFH A +  P   D + F + NV   + ++ A         I+ +SS  A  
Sbjct: 42  DFLQGADFIFHLAGVNRP--KDEAEFESGNVGLTERLLDALTRNGKKPPILLSSSIQAAL 99

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPI 163
                                Y +SK  A+++  + A E G P+
Sbjct: 100 D------------------NPYGKSKLAAEELLQEYARETGAPV 125

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 17/115 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYG---DVTDYRSL 59
            L++G S   G  L  A L  GH V   VR  +  +        +       DVTD+ ++
Sbjct: 7   WLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF-EALHPDRALARLLDVTDFDAI 65

Query: 60  ------VDACFG-CHVIF------HTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                  +A FG   V+       H  A+ E  L +  R F VNV G   + +A 
Sbjct: 66  DAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Length = 277

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
          IL++G S  +G     AL   G  V A  R+  D++ L +EG LE    D  +  S+   
Sbjct: 7  ILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEG-LEAFQLDYAEPESIAAL 65

Length = 277

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 48/192 (25%), Positives = 72/192 (37%), Gaps = 37/192 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE---GALELVYGDVTDYRSL 59
            L++GAS  +G     AL + G  V    RR   +  L  E   GA   +  DVTD  ++
Sbjct: 9   ALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAV 68

Query: 60  VDAC------FG-CHVIFHTA--ALVEPW----LPDPSRFFAVNVEGLKNVVQAA----K 102
             A       FG   ++ + A  AL +P     L D  R    NV+GL N  +A      
Sbjct: 69  EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMV 128

Query: 103 ETKTVEKIIYTSSFFALGSTDG---YIADENQVHEEKYFCTQYERSKAVADKIALQAASE 159
           E K+   II   S        G   Y A        K     +      +  +  + A  
Sbjct: 129 ERKSGH-IINLGSIAGRYPYPGGAVYGA-------TKAAVRAF------SLGLRQELAGT 174

Query: 160 GLPIVPVYPGVI 171
           G+ +  + PG++
Sbjct: 175 GIRVTVISPGLV 186

Length = 246

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 38.6 bits (90), Expect = 9e-04
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 10/108 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDY---R 57
           + LV+GA   +G     AL K G  V A+ R  +D+  L  E   +E V  D++D+    
Sbjct: 9   RALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCVDLSDWDATE 68

Query: 58  SLVDACFGCHVIFHTAALV--EPWLP----DPSRFFAVNVEGLKNVVQ 99
             + +     ++ + AA+   +P+L        R F VNV  + +V Q
Sbjct: 69  EALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTD---YRS 58
           LV+GAS  +G  +  AL + G+ V   +R   D++ L  S G +E V  D  D    R+
Sbjct: 3  ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDARA 62

Query: 59 LVDA 62
          LVDA
Sbjct: 63 LVDA 66

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 44/205 (21%), Positives = 72/205 (35%), Gaps = 47/205 (22%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----------ISGLPSEGALELVYG 51
            +L++G S  +G  L   L+K+G +V  +V R+                 S   +  +  
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANV-IIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 52  DVTDYRS-------LVDACFGCHVIFHTAALVEPWL---PDPSRF---FAVNVEGLKNVV 98
           D++DY          V+      ++ + A +  P L        F     VN  G  NV 
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 99  QAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VAD 150
            A     KE +    I++ SS  AL    GY              + Y  SK     +A+
Sbjct: 122 HAVLPLMKEQRPG-HIVFVSSQAALVGIYGY--------------SAYCPSKFALRGLAE 166

Query: 151 KIALQAASEGLPIVPVYPGVIYGPG 175
            +  +     + +  VYP     PG
Sbjct: 167 SLRQELKPYNIRVSVVYPPDTDTPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 20/165 (12%)

Query: 1   MKILVSGASGYLGGRLCHALL--KQGHSVRALVRRTSD------ISGLPSEGALELVYGD 52
           M+  V+G +G++G RL   LL  ++  +V  LVRR S        +   ++  + LV GD
Sbjct: 1   MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLV-GD 59

Query: 53  VTDYRSLVDACFGCHV-----IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +T+    +       +     + H AA+ +    + ++  A NV+G +NVV+ A+  +  
Sbjct: 60  LTEPGLGLSEADIAELGDIDHVVHLAAIYDLTADEEAQR-AANVDGTRNVVELAERLQAA 118

Query: 108 EKIIYTSSFFALGSTDGYIA----DENQVHEEKYFCTQYERSKAV 148
               + SS    G  +G       DE Q     Y  T++E  K V
Sbjct: 119 T-FHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLV 162

Length = 657

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 52/190 (27%), Positives = 72/190 (37%), Gaps = 40/190 (21%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           KILV+G  G +G  +   L ++G+    +V RTS           EL   D+TD +  V 
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYEN--VVFRTSK----------EL---DLTD-QEAVR 44

Query: 62  ACFGCH---VIFHTAALVEPW---LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A F       + H AA V      +  P+ F   N+    NV+ AA     V+K      
Sbjct: 45  AFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFG-VKK------ 97

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQY----ERSKAVADKIALQAASE------GLPIVP 165
              LGS+  Y     Q  +E    T          A+A K A     E      G   + 
Sbjct: 98  LVFLGSSCIYPDLAPQPIDESDLLTGPPEPTNEGYAIA-KRAGLKLCEAYRKQYGCDYIS 156

Query: 166 VYPGVIYGPG 175
           V P  +YGP 
Sbjct: 157 VMPTNLYGPH 166

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 10/70 (14%)

Query: 4  LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----------ISGLPSEGALELVYGDV 53
          L++G +G  G  L   LL +G+ V  ++RR+S+          I   P++  ++L YGD+
Sbjct: 10 LITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL 69

Query: 54 TDYRSLVDAC 63
          +D  SL    
Sbjct: 70 SDASSLRRWL 79

Length = 340

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSV-------RALVRRTSDISGLPSEGALELVYGDVTD 55
          IL++GA G +G  L  A+L+ G  V        AL      +        L LV  D+TD
Sbjct: 7  ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD 66

Query: 56 YRSL 59
            SL
Sbjct: 67 QESL 70

Length = 256

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 11/68 (16%)

Query: 4  LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGL------PSEGALELVYGD 52
          L++G +G  G  L   LL++G+ V  L+RR+S      I  +       ++  ++L YGD
Sbjct: 4  LITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGD 63

Query: 53 VTDYRSLV 60
          +TD  +L 
Sbjct: 64 LTDSSNLR 71

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 37.4 bits (86), Expect = 0.004
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 19/134 (14%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLPSE---GALELVYGDV 53
           L++G +G++G  L   LL    +V  L   ++       D+    SE        + GD+
Sbjct: 19  LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI 78

Query: 54  TDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
             +     AC     + H AAL  V   L DP    + N++G  N++ AA++        
Sbjct: 79  RKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA------- 131

Query: 112 YTSSFFALGSTDGY 125
           + SSF    S+  Y
Sbjct: 132 HVSSFTYAASSSTY 145

Length = 348

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 25/150 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVT---DYR 57
            L++G    +G  L    L +G  V  L R    ++ L       + +V GDVT   D +
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQ 68

Query: 58  SLVDAC---FG---CHV----IF-HTAALVE-PW-LPDPS--RFFAVNVEGLKNVVQAAK 102
             VD     FG   C V    I+ +  +LV+ P    D +    F VNV+G     +AA 
Sbjct: 69  RAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAAL 128

Query: 103 E--TKTVEKIIYT---SSFFALGSTDGYIA 127
                +   +I+T   SSF+  G    Y A
Sbjct: 129 PALKASGGSMIFTLSNSSFYPGGGGPLYTA 158

Length = 263

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	209
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.98
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.98
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.98
PLN02583	297	cinnamoyl-CoA reductase	99.97
PLN02206	442	UDP-glucuronate decarboxylase	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.97
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.97
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.97
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
PLN02653	340	GDP-mannose 4,6-dehydratase	99.97
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.97
PLN02996	491	fatty acyl-CoA reductase	99.97
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.96
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.96
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.96
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.96
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.96
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.95
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
CHL00194	317	ycf39 Ycf39; Provisional	99.95
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.95
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.94
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.94
PRK06482	276	short chain dehydrogenase; Provisional	99.94
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.94
PLN02778	298	3,5-epimerase/4-reductase	99.93
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.93
PRK07890	258	short chain dehydrogenase; Provisional	99.93
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.93
PRK06128	300	oxidoreductase; Provisional	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PRK06182	273	short chain dehydrogenase; Validated	99.93
PRK07067	257	sorbitol dehydrogenase; Provisional	99.93
PLN02503	605	fatty acyl-CoA reductase 2	99.93
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PRK06398	258	aldose dehydrogenase; Validated	99.92
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK08339	263	short chain dehydrogenase; Provisional	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PRK05865	854	hypothetical protein; Provisional	99.92
PRK05717	255	oxidoreductase; Validated	99.92
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.92
PLN02253	280	xanthoxin dehydrogenase	99.92
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.92
PRK09186	256	flagellin modification protein A; Provisional	99.92
PRK07985	294	oxidoreductase; Provisional	99.92
PRK09135	249	pteridine reductase; Provisional	99.92
PLN00016	378	RNA-binding protein; Provisional	99.92
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.92
PRK06500	249	short chain dehydrogenase; Provisional	99.92
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.92
PRK07060	245	short chain dehydrogenase; Provisional	99.92
PRK06179	270	short chain dehydrogenase; Provisional	99.92
PRK05875	276	short chain dehydrogenase; Provisional	99.92
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK05993	277	short chain dehydrogenase; Provisional	99.92
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.92
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.91
PRK05867	253	short chain dehydrogenase; Provisional	99.91
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.91
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.91
PRK05884	223	short chain dehydrogenase; Provisional	99.91
PRK07774	250	short chain dehydrogenase; Provisional	99.91
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12747	252	short chain dehydrogenase; Provisional	99.91
PRK07024	257	short chain dehydrogenase; Provisional	99.91
PRK12746	254	short chain dehydrogenase; Provisional	99.91
PRK06701	290	short chain dehydrogenase; Provisional	99.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.91
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.91
PRK05650	270	short chain dehydrogenase; Provisional	99.91
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.91
PRK05876	275	short chain dehydrogenase; Provisional	99.91
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.91
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK07856	252	short chain dehydrogenase; Provisional	99.91
PRK07063	260	short chain dehydrogenase; Provisional	99.91
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.91
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06138	252	short chain dehydrogenase; Provisional	99.91
PRK12827	249	short chain dehydrogenase; Provisional	99.91
PRK06101	240	short chain dehydrogenase; Provisional	99.91
PRK08265	261	short chain dehydrogenase; Provisional	99.91
PRK06057	255	short chain dehydrogenase; Provisional	99.91
PRK06196	315	oxidoreductase; Provisional	99.91
PRK07478	254	short chain dehydrogenase; Provisional	99.91
PRK10538	248	malonic semialdehyde reductase; Provisional	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PRK07074	257	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK07577	234	short chain dehydrogenase; Provisional	99.91
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.91
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.91
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK06114	254	short chain dehydrogenase; Provisional	99.91
PRK12829	264	short chain dehydrogenase; Provisional	99.91
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.91
PRK06523	260	short chain dehydrogenase; Provisional	99.91
PRK12939	250	short chain dehydrogenase; Provisional	99.9
PRK07023	243	short chain dehydrogenase; Provisional	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK08264	238	short chain dehydrogenase; Validated	99.9
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK05693	274	short chain dehydrogenase; Provisional	99.9
PRK06172	253	short chain dehydrogenase; Provisional	99.9
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.9
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.9
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.9
PRK06484	520	short chain dehydrogenase; Validated	99.9
PRK08589	272	short chain dehydrogenase; Validated	99.9
PRK07814	263	short chain dehydrogenase; Provisional	99.9
PRK06123	248	short chain dehydrogenase; Provisional	99.9
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.9
PRK07677	252	short chain dehydrogenase; Provisional	99.9
PRK06841	255	short chain dehydrogenase; Provisional	99.9
PRK06483	236	dihydromonapterin reductase; Provisional	99.9
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK07904	253	short chain dehydrogenase; Provisional	99.9
PRK09242	257	tropinone reductase; Provisional	99.9
PRK07825	273	short chain dehydrogenase; Provisional	99.9
PRK08643	256	acetoin reductase; Validated	99.9
PRK12320	699	hypothetical protein; Provisional	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.9
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.9
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.9
PRK12828	239	short chain dehydrogenase; Provisional	99.9
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK12743	256	oxidoreductase; Provisional	99.9
PRK06194	287	hypothetical protein; Provisional	99.89
PRK08267	260	short chain dehydrogenase; Provisional	99.89
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.89
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK07035	252	short chain dehydrogenase; Provisional	99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK06197	306	short chain dehydrogenase; Provisional	99.89
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.89
PRK08226	263	short chain dehydrogenase; Provisional	99.89
PRK05866	293	short chain dehydrogenase; Provisional	99.89
PRK09291	257	short chain dehydrogenase; Provisional	99.89
PRK06139	330	short chain dehydrogenase; Provisional	99.89
PRK12937	245	short chain dehydrogenase; Provisional	99.89
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.89
PRK06949	258	short chain dehydrogenase; Provisional	99.89
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.89
PRK07454	241	short chain dehydrogenase; Provisional	99.89
PRK08177	225	short chain dehydrogenase; Provisional	99.89
PRK07831	262	short chain dehydrogenase; Provisional	99.89
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK09134	258	short chain dehydrogenase; Provisional	99.89
PRK07062	265	short chain dehydrogenase; Provisional	99.89
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.89
PRK08628	258	short chain dehydrogenase; Provisional	99.89
PRK12742	237	oxidoreductase; Provisional	99.89
PRK06914	280	short chain dehydrogenase; Provisional	99.89
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.89
PRK05872	296	short chain dehydrogenase; Provisional	99.89
PRK05854	313	short chain dehydrogenase; Provisional	99.89
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.89
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.89
PRK07041	230	short chain dehydrogenase; Provisional	99.89
PRK06181	263	short chain dehydrogenase; Provisional	99.88
PRK06940	275	short chain dehydrogenase; Provisional	99.88
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK05855	582	short chain dehydrogenase; Validated	99.88
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07832	272	short chain dehydrogenase; Provisional	99.88
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PLN02260	668	probable rhamnose biosynthetic enzyme	99.88
PRK07069	251	short chain dehydrogenase; Validated	99.88
PRK08251	248	short chain dehydrogenase; Provisional	99.88
PRK05599	246	hypothetical protein; Provisional	99.88
PRK07578	199	short chain dehydrogenase; Provisional	99.88
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.88
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.88
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.88
PRK06198	260	short chain dehydrogenase; Provisional	99.88
PRK07576	264	short chain dehydrogenase; Provisional	99.88
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.88
PRK07326	237	short chain dehydrogenase; Provisional	99.88
PRK07109	334	short chain dehydrogenase; Provisional	99.88
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.88
PRK07791	286	short chain dehydrogenase; Provisional	99.87
PRK08324	681	short chain dehydrogenase; Validated	99.87
PLN02780	320	ketoreductase/ oxidoreductase	99.87
PRK12367	245	short chain dehydrogenase; Provisional	99.87
PRK06953	222	short chain dehydrogenase; Provisional	99.87
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.87
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.87
PRK09072	263	short chain dehydrogenase; Provisional	99.87
PRK12744	257	short chain dehydrogenase; Provisional	99.87
PRK08278	273	short chain dehydrogenase; Provisional	99.87
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.87
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.87
PRK06484	520	short chain dehydrogenase; Validated	99.87
PRK06924	251	short chain dehydrogenase; Provisional	99.87
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.87
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.87
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.86
PRK08703	239	short chain dehydrogenase; Provisional	99.86
PRK07201	657	short chain dehydrogenase; Provisional	99.86
PRK08017	256	oxidoreductase; Provisional	99.86
PRK08303	305	short chain dehydrogenase; Provisional	99.86
PRK06125	259	short chain dehydrogenase; Provisional	99.86
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.86
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.85
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
KOG0725	270	consensus Reductases with broad range of substrate	99.85
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.85
PRK08862	227	short chain dehydrogenase; Provisional	99.85
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.84
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.84
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.84
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.84
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.83
KOG1208	314	consensus Dehydrogenases with different specificit	99.83
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.82
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.82
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.82
PLN00015	308	protochlorophyllide reductase	99.82
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.81
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.79
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.79
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.79
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.79
COG1028	251	FabG Dehydrogenases with different specificities (	99.79
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.78
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.77
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.76
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.74
COG2910	211	Putative NADH-flavin reductase [General function p	99.74
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.73
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.72
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.7
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.69
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.67
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.66
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.65
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.48
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.47
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.41
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.4
KOG2774	366	consensus NAD dependent epimerase [General functio	99.34
PRK06720	169	hypothetical protein; Provisional	99.33
PTZ00325	321	malate dehydrogenase; Provisional	99.33
PRK08309	177	short chain dehydrogenase; Provisional	99.27
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.21
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.19
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.19
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.16
PLN00106	323	malate dehydrogenase	99.16
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	99.09
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.09
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.04
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.98
PRK05086	312	malate dehydrogenase; Provisional	98.98
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.95
PRK09620	229	hypothetical protein; Provisional	98.93
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.89
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.84
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.8
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.73
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.72
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.71
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.67
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.64
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.61
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.53
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.51
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.49
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.45
PRK14982	340	acyl-ACP reductase; Provisional	98.43
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.41
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.38
COG3268	382	Uncharacterized conserved protein [Function unknow	98.36
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.35
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	98.35
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.34
PRK05442	326	malate dehydrogenase; Provisional	98.31
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.29
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.27
PRK09496	453	trkA potassium transporter peripheral membrane com	98.26
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	98.25
PLN00112	444	malate dehydrogenase (NADP); Provisional	98.19
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	98.15
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	98.11
PTZ00117	319	malate dehydrogenase; Provisional	98.11
PLN02602	350	lactate dehydrogenase	98.09
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	98.07
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	98.01
PRK06223	307	malate dehydrogenase; Reviewed	98.01
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.01
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	98.01
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.99
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.99
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.95
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.94
PRK08655	437	prephenate dehydrogenase; Provisional	97.92
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.9
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.86
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.86
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.84
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.8
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.79
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.78
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.72
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.71
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.71
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.71
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.7
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.7
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.69
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.69
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.64
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.62
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.61
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.6
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.57
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.55
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.55
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.54
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.51
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.51
PRK09496	453	trkA potassium transporter peripheral membrane com	97.5
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.49
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.48
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.47
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.47
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.46
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.44
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.44
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.41
PRK04148	134	hypothetical protein; Provisional	97.4
PLN02383	344	aspartate semialdehyde dehydrogenase	97.38
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.38
PRK07417	279	arogenate dehydrogenase; Reviewed	97.36
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.35
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.35
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.34
PRK10669	558	putative cation:proton antiport protein; Provision	97.34
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.33
PRK08328	231	hypothetical protein; Provisional	97.3
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.29
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.29
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.29
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.29
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.27
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.27
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.25
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.24
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.24
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.23
PRK08223	287	hypothetical protein; Validated	97.23
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.21
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	97.2
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.2
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.2
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.16
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.16
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.15
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.15
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.13
PRK07574	385	formate dehydrogenase; Provisional	97.13
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.12
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.12
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.11
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.11
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	97.11
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.1
PLN02353	473	probable UDP-glucose 6-dehydrogenase	97.09
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.09
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.07
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.07
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.06
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.01
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.01
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.01
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.01
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.99
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.97
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.97
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.96
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.96
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.95
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.94
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.93
PRK08818	370	prephenate dehydrogenase; Provisional	96.93
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.92
PRK12480	330	D-lactate dehydrogenase; Provisional	96.92
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.92
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.91
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.9
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.9
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.88
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.88
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.85
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.84
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.84
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.82
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.82
PRK13243	333	glyoxylate reductase; Reviewed	96.82
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.81
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.79
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.79
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.79
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.79
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.78
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.78
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.76
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.76
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.73
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.73
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.72
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.71
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.71
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	96.71
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.71
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.7
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.7
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.7
PRK07411	390	hypothetical protein; Validated	96.7
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.7
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.69
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.69
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.68
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.68
PRK07877	722	hypothetical protein; Provisional	96.67
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.67
PLN00203	519	glutamyl-tRNA reductase	96.66
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.64
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.62
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.61
PRK06436	303	glycerate dehydrogenase; Provisional	96.61
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.61
PLN02688	266	pyrroline-5-carboxylate reductase	96.61
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.61
PRK06444	197	prephenate dehydrogenase; Provisional	96.6
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.6
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.6
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.59
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.59
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.55
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.55
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.55
PRK06487	317	glycerate dehydrogenase; Provisional	96.54
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.54
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.53
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.52
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.48
PRK08605	332	D-lactate dehydrogenase; Validated	96.47

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2.3e-35  Score=239.73  Aligned_cols=205  Identities=20%  Similarity=0.263  Sum_probs=160.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CC------CCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP------SEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~------~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |+|+|||||||||++|+++|+++|++|++++|.......    ..      ...++.++.+|++|.+.+..+++++|+||
T Consensus        16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~Vi   95 (348)
T PRK15181         16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVL   95 (348)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEEE
Confidence            589999999999999999999999999999985432111    00      01357899999999999999999999999


Q ss_pred             EcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      |+|+....  ...++...+++|+.++.+++++|++. +.++|||+||..+|+.....+..|+.+.   .|.++|+.+|.+
T Consensus        96 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~---~p~~~Y~~sK~~  171 (348)
T PRK15181         96 HQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPDLPKIEERIG---RPLSPYAVTKYV  171 (348)
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCCCCCCCCCCC---CCCChhhHHHHH
Confidence            99996432  33567788999999999999999987 5789999999999986544444443322   234679999999


Q ss_pred             HHHHHHHHh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          149 ADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       149 ~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +|.+++.+. +++++++++||+++|||+....   ..+++.++.....++         ....|+|++|+|+++
T Consensus       172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~  245 (348)
T PRK15181        172 NELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN  245 (348)
T ss_pred             HHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence            999988876 4589999999999999976322   245677766655433         345789999999874

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=4.4e-35  Score=230.78  Aligned_cols=203  Identities=36%  Similarity=0.519  Sum_probs=154.9

Q ss_pred             EEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCC--CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCC
Q 028444            4 LVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (209)
Q Consensus         4 lItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (209)
                      |||||+||||++|+++|+++|  ++|.+++++.....  ........+++++|++|.+++.++++++|+|||+|++...+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  79999988764322  22222234499999999999999999999999999986554


Q ss_pred             C-CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccC---Cccc-cCCCccccccccCChHHHHHHHHHHHHH
Q 028444           80 L-PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST---DGYI-ADENQVHEEKYFCTQYERSKAVADKIAL  154 (209)
Q Consensus        80 ~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~---~~~~-~~e~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (209)
                      . ..+++++++|+.||.+|+++|++. ++++|||+||..++++.   .+.. .+|..+.+ ..+...|+.||.++|++.+
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~-~~~~~~Y~~SK~~AE~~V~  158 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP-SSPLDPYAESKALAEKAVL  158 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCCCcccCCcCCccc-ccccCchHHHHHHHHHHHH
Confidence            4 445679999999999999999988 68999999999998862   2221 23443332 2355679999999999998


Q ss_pred             HHhh------cCCCEEEEecCceecCCCCCcchhHHHHHHHH------hcCCceEEEEEEeeeeec
Q 028444          155 QAAS------EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLL------FSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       155 ~~~~------~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~dva~~  208 (209)
                      +...      ..+++++|||+.||||++......+..+.+..      ..+.....++|++|+|.|
T Consensus       159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~a  224 (280)
T PF01073_consen  159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHA  224 (280)
T ss_pred             hhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHH
Confidence            8765      24899999999999998744333333333221      123445678999999876

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-34  Score=221.90  Aligned_cols=204  Identities=23%  Similarity=0.283  Sum_probs=166.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccC--
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV--   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~--   76 (209)
                      |+||||||+|+||++.+.+|++.|++|+++++-.....+.......+++++|+.|.+.+.+.++  ++|+|||+||..  
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V   80 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV   80 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence            8999999999999999999999999999998754322221111116899999999999999986  599999999963  


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                      ..+.++|.++++.|+.+|..|+++|+++ ++++|||.||+.+||.+...|..|+.+..+   .++|++||.+.|++++.+
T Consensus        81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~~PI~E~~~~~p---~NPYG~sKlm~E~iL~d~  156 (329)
T COG1087          81 GESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTTSPISETSPLAP---INPYGRSKLMSEEILRDA  156 (329)
T ss_pred             chhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCCcccCCCCCCCC---CCcchhHHHHHHHHHHHH
Confidence            5567899999999999999999999999 589999999999999988888888776553   478999999999999998


Q ss_pred             hh-cCCCEEEEecCceecCCC--------CCcchhHHHHHHHHhcCCce----------------EEEEEEeeeeec
Q 028444          157 AS-EGLPIVPVYPGVIYGPGK--------LTTGNLVAKLVRLLFSQHFS----------------LVFFHCQITCHA  208 (209)
Q Consensus       157 ~~-~~~~~~~~rp~~v~g~~~--------~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~dva~~  208 (209)
                      ++ .+++++++|-+++-|-..        .+...+++..++..+.+++.                +.++||.|+|+|
T Consensus       157 ~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~a  233 (329)
T COG1087         157 AKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADA  233 (329)
T ss_pred             HHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHH
Confidence            74 589999999999987532        22345677666666644442                357999999875

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.6e-34  Score=224.87  Aligned_cols=208  Identities=34%  Similarity=0.491  Sum_probs=164.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC------CCCCC-CCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI------SGLPS-EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~------~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|+|||||||||+.|+++|+++||+|+++.|++.+.      ..++. .++...+.+|++|++++.++++++|+|+|.|
T Consensus         7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~A   86 (327)
T KOG1502|consen    7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHTA   86 (327)
T ss_pred             cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEeC
Confidence            5899999999999999999999999999999987652      22221 2468999999999999999999999999999


Q ss_pred             ccCCCCCCCcc-chhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccC-----CccccCCCcccccccc---CChHHH
Q 028444           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF---CTQYER  144 (209)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~-----~~~~~~e~~~~~~~~~---~~~Y~~  144 (209)
                      .++.....+++ +.++..+.|+.+++++|++...++|+|++||..+...+     +....+|+.+......   ..-|..
T Consensus        87 sp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~  166 (327)
T KOG1502|consen   87 SPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYAL  166 (327)
T ss_pred             ccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHH
Confidence            98777555555 79999999999999999998668999999998765432     2334555554332211   134999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC------ceEEEEEEeeeeec
Q 028444          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH------FSLVFFHCQITCHA  208 (209)
Q Consensus       145 sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~  208 (209)
                      +|.++|+.++++++ .+++.+.+.|+.|+||...+........+..++.|.      ...-|+|++|||+|
T Consensus       167 sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~A  237 (327)
T KOG1502|consen  167 SKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALA  237 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHH
Confidence            99999999999985 579999999999999987554344444555555552      22358999999976

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=3.4e-34  Score=232.90  Aligned_cols=207  Identities=20%  Similarity=0.296  Sum_probs=160.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCC-CHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++|+++|+++ |++|++++|+..+...+....+++++.+|++ +.+.+.++++++|+|||+|+...+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~   81 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATP   81 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCCh
Confidence            58999999999999999999986 6999999986543333322246999999998 777888888999999999997543


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc----cccccCChHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~e~~  152 (209)
                        ...++...+++|+.++.++++++++. + ++|||+||..+|+.....+.+|+...    +...+.+.|+.+|.++|++
T Consensus        82 ~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         82 ATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             HHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence              34677788999999999999999987 3 69999999999986544334443221    2223456799999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCC-------cchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLT-------TGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++.+. +.+++++++||+.+|||+...       ...++..++..+..++         +...|+|++|+|+++
T Consensus       160 ~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~  233 (347)
T PRK11908        160 IWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDAL  233 (347)
T ss_pred             HHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHH
Confidence            98876 568999999999999997521       2345666666655443         445689999999763

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=6.6e-34  Score=234.26  Aligned_cols=207  Identities=20%  Similarity=0.239  Sum_probs=155.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|||||||||||++|+++|+++ |++|++++|+..+...+..      ..+++++.+|++|.+.+.++++++|+|||+|
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlA   94 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLA   94 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcc
Confidence            78999999999999999999998 5999999987543322111      1368999999999999999999999999999


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc------------------
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH------------------  133 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~------------------  133 (209)
                      +...+  +..++.+.+..|+.++.++++++++. + ++|||+||..+||.......+|+.+.                  
T Consensus        95 a~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~  172 (386)
T PLN02427         95 AICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIF  172 (386)
T ss_pred             cccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccccc
Confidence            97543  23455567789999999999999876 3 79999999999986432222221110                  


Q ss_pred             -cccccCChHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCC----------cchhHHHHHHHHhcCC-------
Q 028444          134 -EEKYFCTQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLT----------TGNLVAKLVRLLFSQH-------  194 (209)
Q Consensus       134 -~~~~~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~----------~~~~~~~~~~~~~~~~-------  194 (209)
                       +...+.+.|+.+|.++|.++..+. +.+++++++||+++|||+...          ...++..++..+..++       
T Consensus       173 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~  252 (386)
T PLN02427        173 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDG  252 (386)
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECC
Confidence             111234579999999999998876 458999999999999997421          1234444555554433       


Q ss_pred             --ceEEEEEEeeeeecC
Q 028444          195 --FSLVFFHCQITCHAI  209 (209)
Q Consensus       195 --~~~~~~~~~dva~~i  209 (209)
                        ....|+|++|+|+++
T Consensus       253 g~~~r~~i~V~Dva~ai  269 (386)
T PLN02427        253 GQSQRTFVYIKDAIEAV  269 (386)
T ss_pred             CCceECcEeHHHHHHHH
Confidence              345789999999874

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.6e-33  Score=228.13  Aligned_cols=208  Identities=28%  Similarity=0.421  Sum_probs=153.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC------CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|+||||+||||++++++|+++|++|+++.|+.....      .+....+++++.+|++|.+++.++++++|+|||+|+
T Consensus        10 ~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   89 (338)
T PLN00198         10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVAT   89 (338)
T ss_pred             CeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeCC
Confidence            47999999999999999999999999999888754321      111112588999999999999999999999999999


Q ss_pred             cCCCCCCCcc-chhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC----ccccCCCccc------cccccCChHH
Q 028444           75 LVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD----GYIADENQVH------EEKYFCTQYE  143 (209)
Q Consensus        75 ~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~----~~~~~e~~~~------~~~~~~~~Y~  143 (209)
                      .......++. .++++|+.++.++++++.+..++++||++||..+|+...    +.+.+|+...      ...+|.++|+
T Consensus        90 ~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~  169 (338)
T PLN00198         90 PVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYP  169 (338)
T ss_pred             CCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhH
Confidence            6433323443 467999999999999998864568999999999998432    2233443211      1123456799


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC-cchhHHHHHHHHhcCC----------c----eEEEEEEeeeee
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT-TGNLVAKLVRLLFSQH----------F----SLVFFHCQITCH  207 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~-~~~~~~~~~~~~~~~~----------~----~~~~~~~~dva~  207 (209)
                      .||.++|.+++.+.+ ++++++++||+++|||+... .+..+. ++.....++          +    ...|+|++|+|+
T Consensus       170 ~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~  248 (338)
T PLN00198        170 ASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCR  248 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHHHHHH
Confidence            999999999998864 69999999999999997532 122222 222222221          1    147999999998


Q ss_pred             cC
Q 028444          208 AI  209 (209)
Q Consensus       208 ~i  209 (209)
                      ++
T Consensus       249 a~  250 (338)
T PLN00198        249 AH  250 (338)
T ss_pred             HH
Confidence            63

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.1e-34  Score=216.11  Aligned_cols=205  Identities=21%  Similarity=0.252  Sum_probs=168.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcC-----CCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRR-----TSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~-----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~   71 (209)
                      |++|||||+||||+++++.++++.  ++|+.++.-     .+.+..+...++..++++|+.|.+.+.++++  ++|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            899999999999999999999886  557777652     2223334444689999999999999999998  5999999


Q ss_pred             cCccC--CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc--cccCCCccccccccCChHHHHHH
Q 028444           72 TAALV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG--YIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        72 ~a~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~--~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      .|+-+  +.+..+|..++++|+.||.+|+|++++....-||+++|+..|||+...  ...+|.++..   |.+||++||+
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~---PsSPYSASKA  157 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYN---PSSPYSASKA  157 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCC---CCCCcchhhh
Confidence            99964  667789999999999999999999999854358999999999997542  2344544433   3488999999


Q ss_pred             HHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       148 ~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      .++.+.+.|.+ +|+++++.|+++-|||.+.+ ..+++.++.+.+.|+         +...|+||+|-|+||
T Consensus       158 asD~lVray~~TYglp~~ItrcSNNYGPyqfp-EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai  228 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQFP-EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAI  228 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCCCCcCCCcCc-hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHH
Confidence            99999999874 69999999999999998864 578888888877555         445799999998875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.7e-33  Score=226.81  Aligned_cols=209  Identities=25%  Similarity=0.314  Sum_probs=159.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |++|||||+||||++++++|+++|++|+++.|+.......       ....+++++.+|++|.+.+.++++++|+|||||
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A   85 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHTA   85 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEeC
Confidence            5799999999999999999999999999988876543211       011368899999999999999999999999999


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC-----ccccCCCcccccc---ccCChHH
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-----GYIADENQVHEEK---YFCTQYE  143 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~-----~~~~~e~~~~~~~---~~~~~Y~  143 (209)
                      +....  ...++.+.+++|+.++.++++++.+..+.++||++||..+|+...     ..+.+|+.+..+.   .+.+.|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            96432  223456789999999999999998864467999999988775432     2234555433221   1235799


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce-----EEEEEEeeeeecC
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS-----LVFFHCQITCHAI  209 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~dva~~i  209 (209)
                      .+|.++|.+++.+.+ .+++++++||+.+|||+......+...++..++.++.+     ..|+|++|+|+++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~  237 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAH  237 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHH
Confidence            999999999988764 58999999999999998643333455566666655544     3699999999863

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=9.4e-34  Score=227.92  Aligned_cols=209  Identities=26%  Similarity=0.348  Sum_probs=155.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC------C-CCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------P-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+||||||+||||++++++|+++|++|++++|+.......      . ...+++++.+|++|++.+..+++++|+|||+|
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   84 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHTA   84 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEeC
Confidence            5899999999999999999999999999999875432110      0 11368899999999999999999999999999


Q ss_pred             ccCCCCCCCcc-chhhhHHHHHHHHHHHHHhcCCccEEEEEccce--eeccC---CccccCCCcccccc---ccCChHHH
Q 028444           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF--ALGST---DGYIADENQVHEEK---YFCTQYER  144 (209)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~--~~~~~---~~~~~~e~~~~~~~---~~~~~Y~~  144 (209)
                      +.......++. .++++|+.++.++++++++..++++||++||..  +|++.   ...+.+|+.+..+.   ...+.|+.
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            97544444554 789999999999999998764568999999976  36532   12234444332221   11246999


Q ss_pred             HHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC-----ceEEEEEEeeeeecC
Q 028444          145 SKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH-----FSLVFFHCQITCHAI  209 (209)
Q Consensus       145 sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~i  209 (209)
                      +|.++|++++.+. +.+++++++||+.+|||+...........+..+..+.     ....|+|++|+|+++
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  235 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAH  235 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHH
Confidence            9999999998876 4699999999999999975332223333444444332     346799999999874

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-33  Score=226.42  Aligned_cols=209  Identities=29%  Similarity=0.377  Sum_probs=155.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC---C----CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---L----PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~---~----~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      ++|+||||+||||++++++|+++|++|+++.|+..+...   +    ....+++++.+|++|.+.+.++++++|+|||+|
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A   85 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHTA   85 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEeC
Confidence            479999999999999999999999999999987654221   1    011368999999999999999999999999999


Q ss_pred             ccCCCCCCCc-cchhhhHHHHHHHHHHHHHhcCCccEEEEEccceee--ccC---CccccCCCcccccc---ccCChHHH
Q 028444           74 ALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL--GST---DGYIADENQVHEEK---YFCTQYER  144 (209)
Q Consensus        74 ~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~--~~~---~~~~~~e~~~~~~~---~~~~~Y~~  144 (209)
                      +.......++ .+.++.|+.++.++++++++..++++||++||..+|  +..   .+.+.+|+.+..+.   .+.+.|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            9754333344 357899999999999999876457899999998764  322   12234444332221   23467999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC-----ceEEEEEEeeeeecC
Q 028444          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH-----FSLVFFHCQITCHAI  209 (209)
Q Consensus       145 sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~i  209 (209)
                      +|.++|.+++++.+ ++++++++||+.+|||+..........++..+..++     ....|+|++|+|+++
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~  236 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAH  236 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHH
Confidence            99999999998864 589999999999999975322222334444444443     235799999999863

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=7e-33  Score=241.51  Aligned_cols=207  Identities=20%  Similarity=0.293  Sum_probs=161.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHH-HHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|||||||||||++|+++|+++ |++|++++|............+++++.+|++|.+. +.++++++|+|||+|+...+
T Consensus       316 ~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~  395 (660)
T PRK08125        316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATP  395 (660)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccccCc
Confidence            68999999999999999999986 79999999976543322222478999999998655 56778899999999997543


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc----cccccCChHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~e~~  152 (209)
                        +..++...+++|+.++.+++++|++. + ++|||+||..+||.....+.+|+.+.    +...+.+.|+.+|.++|.+
T Consensus       396 ~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~  473 (660)
T PRK08125        396 IEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRV  473 (660)
T ss_pred             hhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHH
Confidence              34566778999999999999999987 3 69999999999986544455555432    2223446799999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCC-------cchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLT-------TGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++.+. +++++++++||+++|||+...       ....+..++.....++         +...|+|++|+|+++
T Consensus       474 ~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~  547 (660)
T PRK08125        474 IWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_pred             HHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHH
Confidence            99986 459999999999999997531       1245666766665443         345689999999863

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.4e-33  Score=226.34  Aligned_cols=208  Identities=26%  Similarity=0.365  Sum_probs=152.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |+||||||+||||++++++|+++|++|++++|+..+...    +....+++++.+|++|.+.+.++++++|+|||+|+..
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~   90 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAASM   90 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCccc
Confidence            789999999999999999999999999999987543221    1112368899999999999999999999999999975


Q ss_pred             CCC----CCCccc-----hhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC--c---cccCCCccccc------c
Q 028444           77 EPW----LPDPSR-----FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD--G---YIADENQVHEE------K  136 (209)
Q Consensus        77 ~~~----~~~~~~-----~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~--~---~~~~e~~~~~~------~  136 (209)
                      ...    ..++..     .++.|+.++.++++++++.++.++||++||..+|+...  +   .+.+|+...+.      .
T Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~  170 (353)
T PLN02896         91 EFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTK  170 (353)
T ss_pred             cCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccC
Confidence            322    123433     45566799999999998875468999999999998432  1   23444422211      1


Q ss_pred             ccCChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc-chhHHHHHHHHhcCCc--------------eEEEE
Q 028444          137 YFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQHF--------------SLVFF  200 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~~~--------------~~~~~  200 (209)
                      .+.++|+.||.++|+++..+.+ .+++++++||+++|||+.... ...+..++.. ..++.              ...|+
T Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~dfi  249 (353)
T PLN02896        171 ASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSP-ITGDSKLFSILSAVNSRMGSIALV  249 (353)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHH-hcCCccccccccccccccCceeEE
Confidence            2345799999999999999874 689999999999999976321 2233333322 12221              23799


Q ss_pred             EEeeeeecC
Q 028444          201 HCQITCHAI  209 (209)
Q Consensus       201 ~~~dva~~i  209 (209)
                      |++|+|+++
T Consensus       250 ~v~Dva~a~  258 (353)
T PLN02896        250 HIEDICDAH  258 (353)
T ss_pred             eHHHHHHHH
Confidence            999999864

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.8e-32  Score=222.28  Aligned_cols=205  Identities=28%  Similarity=0.412  Sum_probs=154.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCC-CCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPS-EGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|+||||+||||++++++|+++|++|++++|+.++..     .+.. ..+++++.+|++|.+.+.++++++|+|||+|+
T Consensus        11 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~   90 (342)
T PLN02214         11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHTAS   90 (342)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEecC
Confidence            47999999999999999999999999999999755321     1111 12588999999999999999999999999999


Q ss_pred             cCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc-eeeccCCc---cccCCCcccc---ccccCChHHHHHH
Q 028444           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FALGSTDG---YIADENQVHE---EKYFCTQYERSKA  147 (209)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~-~~~~~~~~---~~~~e~~~~~---~~~~~~~Y~~sK~  147 (209)
                      ..   ..++.+.+++|+.++.++++++++. ++++||++||. .+|+....   .+.+|+.+.+   +..+.+.|+.+|.
T Consensus        91 ~~---~~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~  166 (342)
T PLN02214         91 PV---TDDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKM  166 (342)
T ss_pred             CC---CCCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHH
Confidence            64   3456788999999999999999987 47899999996 57874321   2345553221   1124467999999


Q ss_pred             HHHHHHHHHh-hcCCCEEEEecCceecCCCCCc-chhHHHHHHHHhc-----CCceEEEEEEeeeeecC
Q 028444          148 VADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFS-----QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       148 ~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~i  209 (209)
                      ++|.+++.+. +++++++++||+++|||+.... ...+..++..+..     +.....|+|++|+|+++
T Consensus       167 ~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~  235 (342)
T PLN02214        167 VAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAH  235 (342)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHH
Confidence            9999999886 4699999999999999976321 1122223322221     22345799999999864

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=2.3e-32  Score=222.45  Aligned_cols=207  Identities=30%  Similarity=0.421  Sum_probs=152.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC------C-CCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------P-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+||||||+||||++++++|+++|++|++++|+.......      . ...+++++.+|++|.+.+.++++++|+|||+|
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A   85 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHVA   85 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEeC
Confidence            4899999999999999999999999999999875443211      0 11257899999999999999999999999999


Q ss_pred             ccCCCCCCCc-cchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC-ccc-cCCCccc------cccccCChHHH
Q 028444           74 ALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYI-ADENQVH------EEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~-~~~-~~e~~~~------~~~~~~~~Y~~  144 (209)
                      +.......++ ...+++|+.++.++++++.+.+.+++|||+||..+|+... ..+ .+|....      +...+.++|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            9654333344 4689999999999999999874467999999987776432 122 2443221      11122357999


Q ss_pred             HHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCC--cchhHHHHHHHHhcCC-------ceEEEEEEeeeeecC
Q 028444          145 SKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLFSQH-------FSLVFFHCQITCHAI  209 (209)
Q Consensus       145 sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~i  209 (209)
                      ||.++|.+++.+. +++++++++||+++|||+...  ...++..+ .. ..+.       ....|+|++|+|+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~r~~v~V~Dva~a~  238 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITAL-SL-ITGNEAHYSIIKQGQFVHLDDLCNAH  238 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHH-HH-hcCCccccCcCCCcceeeHHHHHHHH
Confidence            9999999999887 459999999999999997532  11222221 11 1111       225899999999874

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=3.2e-32  Score=227.07  Aligned_cols=208  Identities=22%  Similarity=0.215  Sum_probs=151.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-------CCCC---------------CCCceEEEEccCCCHHH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-------SGLP---------------SEGALELVYGDVTDYRS   58 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-------~~~~---------------~~~~~~~~~~Dl~~~~~   58 (209)
                      |+||||||+||||++|+++|+++|++|++++|...+.       +...               ...+++++.+|++|.+.
T Consensus        48 k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~  127 (442)
T PLN02572         48 KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEF  127 (442)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHH
Confidence            5899999999999999999999999999987532110       0000               01258899999999999


Q ss_pred             HHHHhc--CcCEEEEcCccCCC--CCC---CccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCC--
Q 028444           59 LVDACF--GCHVIFHTAALVEP--WLP---DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADE--  129 (209)
Q Consensus        59 ~~~~~~--~~d~vi~~a~~~~~--~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e--  129 (209)
                      +.++++  ++|+|||+|+....  ...   ++...+++|+.++.++++++++.+...+||++||..+||.... +.+|  
T Consensus       128 v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~-~~~E~~  206 (442)
T PLN02572        128 LSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI-DIEEGY  206 (442)
T ss_pred             HHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC-CCcccc
Confidence            999887  58999999976322  112   2345678999999999999998742248999999999985421 1221  


Q ss_pred             ---------CccccccccCChHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCc----------------chhH
Q 028444          130 ---------NQVHEEKYFCTQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT----------------GNLV  183 (209)
Q Consensus       130 ---------~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~----------------~~~~  183 (209)
                               +....+..|.++|+.+|.++|.+++.+. ++|++++++||+++|||+....                ...+
T Consensus       207 i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i  286 (442)
T PLN02572        207 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTAL  286 (442)
T ss_pred             cccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHH
Confidence                     1111123345789999999999998876 4599999999999999985321                1345


Q ss_pred             HHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          184 AKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       184 ~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ..++.....++         ....|+|++|+|+++
T Consensus       287 ~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~  321 (442)
T PLN02572        287 NRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCI  321 (442)
T ss_pred             HHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHH
Confidence            55555544443         345789999999874

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.2e-32  Score=222.49  Aligned_cols=206  Identities=23%  Similarity=0.287  Sum_probs=158.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~   74 (209)
                      |+|+||||+||||++++++|+++|++|++++|+.......    ....++.++.+|++|.+.+.+++++  +|+|||+|+
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~   84 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAA   84 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECCc
Confidence            5899999999999999999999999999999876532211    1112577899999999999998874  699999999


Q ss_pred             cC--CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc-cccCCCccccccccCChHHHHHHHHHH
Q 028444           75 LV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        75 ~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      ..  .....++...+++|+.++.++++++++....++||++||..+|+.... .+.+|+.+.   .+.++|+.+|.++|.
T Consensus        85 ~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~---~p~~~Y~~sK~~~e~  161 (349)
T TIGR02622        85 QPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPL---GGHDPYSSSKACAEL  161 (349)
T ss_pred             ccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCC---CCCCcchhHHHHHHH
Confidence            63  223456778899999999999999987643679999999999986432 233343322   234679999999999


Q ss_pred             HHHHHhh--------cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC--------ceEEEEEEeeeeecC
Q 028444          152 IALQAAS--------EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH--------FSLVFFHCQITCHAI  209 (209)
Q Consensus       152 ~~~~~~~--------~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~~i  209 (209)
                      +++.+.+        .+++++++||+++|||+......+++.++.....++        ....|+|++|+|+++
T Consensus       162 ~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~  235 (349)
T TIGR02622       162 VIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGY  235 (349)
T ss_pred             HHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHH
Confidence            9887653        289999999999999976433456777777766543        345689999998763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=1e-31  Score=216.33  Aligned_cols=206  Identities=38%  Similarity=0.605  Sum_probs=161.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+++||||+||||++++++|+++|++|++++|+......+.. .+++++.+|++|.+++.++++++|+|||+|+....+.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            799999999999999999999999999999998665433322 3688999999999999999999999999998655555


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc-CCccccCCCccccccccCChHHHHHHHHHHHHHHHhh-
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS-TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-  158 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~-~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-  158 (209)
                      .++.+.+++|+.++.++++++.+. +++++|++||..+|+. ..+.+.+|+.+..+....+.|+.+|.++|++++.+.+ 
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  158 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE  158 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh
Confidence            667888999999999999999987 4789999999999985 3334455554443333346799999999999998865 


Q ss_pred             cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC------ceEEEEEEeeeeecC
Q 028444          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH------FSLVFFHCQITCHAI  209 (209)
Q Consensus       159 ~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~i  209 (209)
                      .+++++++||+.+|||+.... .....++.....+.      ....|+|++|+|+++
T Consensus       159 ~~~~~~ilR~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  214 (328)
T TIGR03466       159 KGLPVVIVNPSTPIGPRDIKP-TPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGH  214 (328)
T ss_pred             cCCCEEEEeCCccCCCCCCCC-CcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHH
Confidence            589999999999999976321 11222333332222      224689999999863

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.8e-31  Score=218.41  Aligned_cols=206  Identities=17%  Similarity=0.144  Sum_probs=153.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC--
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (209)
                      |+|+|||||||||++++++|.++|++|++++|......... ....+++.+|++|.+.+..++.++|+|||+|+....  
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~  100 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSED-MFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMG  100 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccc-cccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCcc
Confidence            78999999999999999999999999999998643211111 113678899999999998888999999999986432  


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCcc----ccCCCccccccccCChHHHHHHHHHHHH
Q 028444           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY----IADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~----~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                       ...++...++.|+.++.+|++++++. +.++|||+||..+|+.....    +..|+... +..|.+.|+.+|..+|+++
T Consensus       101 ~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~-p~~p~s~Yg~sK~~~E~~~  178 (370)
T PLN02695        101 FIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQLETNVSLKESDAW-PAEPQDAYGLEKLATEELC  178 (370)
T ss_pred             ccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCccccCcCCCcCcccCC-CCCCCCHHHHHHHHHHHHH
Confidence             22345567889999999999999987 57899999999999864321    22232211 2234578999999999999


Q ss_pred             HHHh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHh----------cCCceEEEEEEeeeeecC
Q 028444          154 LQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLF----------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~dva~~i  209 (209)
                      +.+. +.+++++++||+++|||+....   ......++...+          .++....|+|++|+++++
T Consensus       179 ~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai  248 (370)
T PLN02695        179 KHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGV  248 (370)
T ss_pred             HHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHH
Confidence            8876 4599999999999999965211   112334444332          244556789999999864

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=9.9e-33  Score=212.43  Aligned_cols=203  Identities=31%  Similarity=0.461  Sum_probs=163.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCc--CEEEEcCccCC--C
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGC--HVIFHTAALVE--P   78 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vi~~a~~~~--~   78 (209)
                      |||||||||||++++++|+++|++|+.+.|+...........+++++.+|+.|.+.+.++++..  |+|||+|+...  .
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            7999999999999999999999999998887654321111126899999999999999999865  99999999742  2


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                      +..++...++.|+.++.++++++.+.. .+++|++||..+|+...+.+.+|+.+.   .+.++|+.+|..+|++++.+.+
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~---~~~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPI---NPLSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGC---CHSSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccc
Confidence            225667889999999999999999984 589999999999998765555555544   3457799999999999998874


Q ss_pred             -cCCCEEEEecCceecCC--CCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          159 -EGLPIVPVYPGVIYGPG--KLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       159 -~~~~~~~~rp~~v~g~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                       .+++++++||+.+|||+  ......++..++..+..++         ....|+|++|+|+++
T Consensus       157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  219 (236)
T PF01370_consen  157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAI  219 (236)
T ss_dssp             HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHH
Confidence             59999999999999998  1223567777887776544         446789999999863

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.3e-31  Score=222.60  Aligned_cols=202  Identities=20%  Similarity=0.270  Sum_probs=153.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |||+|||||||||++|+++|+++|++|++++|......    ......+++++.+|+.+.     .+.++|+|||+|+..
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa~~  195 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  195 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECceec
Confidence            79999999999999999999999999999987532111    111123688889998765     346899999999964


Q ss_pred             CC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc--cccccCChHHHHHHHHHHH
Q 028444           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~~  152 (209)
                      .+  ...++...+++|+.++.+|+++|++..  .+||++||..+|+.....+.+|+...  .+..+.+.|+.+|..+|++
T Consensus       196 ~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~  273 (436)
T PLN02166        196 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  273 (436)
T ss_pred             cchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHH
Confidence            33  234677889999999999999999874  38999999999997554455554321  1222346799999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-cchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-TGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~~-~~~~~~~~rp~~v~g~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++.+.+ .+++++++||+++|||+... ...++..++.....++         ....|+|++|+|+++
T Consensus       274 ~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai  341 (436)
T PLN02166        274 AMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGL  341 (436)
T ss_pred             HHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence            998864 58999999999999997532 2345666666655443         345789999999864

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=4e-31  Score=211.57  Aligned_cols=203  Identities=30%  Similarity=0.431  Sum_probs=157.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCc-CEEEEcCccCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGC-HVIFHTAALVEPW   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-d~vi~~a~~~~~~   79 (209)
                      |+|||||||||||++|+++|+++|++|++++|...+.....  .++.++.+|+++.+.+..+.++. |+|||+|+.....
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~   78 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVP   78 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchh
Confidence            78999999999999999999999999999999766544433  37889999999998888888888 9999999975433


Q ss_pred             CC---CccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccC-CccccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           80 LP---DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        80 ~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~-~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      ..   ++..++++|+.++.++++++++. ++++|||.||..+|+.. .+.+.+|+.  .+..|.++|+.+|.++|.++..
T Consensus        79 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~~~~~~~~E~~--~~~~p~~~Yg~sK~~~E~~~~~  155 (314)
T COG0451          79 DSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDPPPLPIDEDL--GPPRPLNPYGVSKLAAEQLLRA  155 (314)
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCCCCCCCccccc--CCCCCCCHHHHHHHHHHHHHHH
Confidence            22   34568999999999999999995 68999998887877754 233455553  2222234799999999999999


Q ss_pred             Hhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcCCc----------eEEEEEEeeeeec
Q 028444          156 AAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQHF----------SLVFFHCQITCHA  208 (209)
Q Consensus       156 ~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~dva~~  208 (209)
                      +.+ .+++++++||+.+|||+....  ..+...++.....+..          ...++|++|++++
T Consensus       156 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  221 (314)
T COG0451         156 YARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA  221 (314)
T ss_pred             HHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHH
Confidence            875 689999999999999987532  1344444444443332          2358999999875

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.98  E-value=3.3e-31  Score=215.95  Aligned_cols=205  Identities=18%  Similarity=0.234  Sum_probs=153.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCC--CC---CCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSD--IS---GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~--~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~   72 (209)
                      |+|||||||||||++++++|+++|++++++ +|....  ..   ......++.++.+|++|.+.+.+++++  +|+|||+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~   81 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL   81 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence            389999999999999999999999876554 443221  11   111113578899999999999998874  8999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhc--------CCccEEEEEccceeeccCC--ccccCCCccccccccCC
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKET--------KTVEKIIYTSSFFALGSTD--GYIADENQVHEEKYFCT  140 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~i~~ss~~~~~~~~--~~~~~e~~~~~~~~~~~  140 (209)
                      ||....  ...++..++++|+.++.++++++.+.        .+.++||++||..+|+...  ..+.+|+.+..   +.+
T Consensus        82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~---p~s  158 (355)
T PRK10217         82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA---PSS  158 (355)
T ss_pred             CcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCC---CCC
Confidence            997533  23466789999999999999999863        1346899999999998532  22344443322   346


Q ss_pred             hHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          141 QYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      .|+.||.++|.+++.++ +.+++++++||+++|||+... ..+++.++.....+.         ....|+|++|+|+++
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~  236 (355)
T PRK10217        159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAL  236 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-ccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHH
Confidence            79999999999999886 568999999999999998642 345566655554433         345689999999874

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.98  E-value=4.7e-31  Score=214.14  Aligned_cols=206  Identities=21%  Similarity=0.177  Sum_probs=155.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-----CCCCCC------CCceEEEEccCCCHHHHHHHhcC--cC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPS------EGALELVYGDVTDYRSLVDACFG--CH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~--~d   67 (209)
                      |+||||||+||||++++++|+++|++|++++|++..     ...+..      ..+++++++|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999987532     111110      13588999999999999999884  69


Q ss_pred             EEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        68 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      +|||+|+....  ...++...+++|+.++.+++++|++...  ..+|||+||..+||.....+.+|+.+.   .|.++|+
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~---~p~~~Y~  157 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPF---YPRSPYA  157 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCC---CCCChhH
Confidence            99999997532  2334567788999999999999998632  248999999999996544445554432   2347899


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC--cchhHHHHHHHHhc----------CCceEEEEEEeeeeecC
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLFS----------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~~dva~~i  209 (209)
                      .||.++|.+++.+.+ .++++...|+..+|||+...  ....+..++..+..          |+....|+|++|+|+++
T Consensus       158 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~  236 (343)
T TIGR01472       158 AAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAM  236 (343)
T ss_pred             HHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHH
Confidence            999999999988864 58999999999999996421  12333444443332          34456789999999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=3.5e-31  Score=210.89  Aligned_cols=206  Identities=26%  Similarity=0.361  Sum_probs=149.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC------CCCC-CCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI------SGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~------~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      ++|+|||||||||++++++|+++|++|+++.|+..+.      ..+. ...+++++++|++|.+.+.+++.++|.|+|.+
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~   86 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCCF   86 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEeC
Confidence            3699999999999999999999999999999863221      1111 11368899999999999999999999999988


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc--C---CccccCCCcccccc---ccCChHHHH
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS--T---DGYIADENQVHEEK---YFCTQYERS  145 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~--~---~~~~~~e~~~~~~~---~~~~~Y~~s  145 (209)
                      +.......++.+++++|+.++.++++++.+..+.++||++||..++..  .   ...+.+|+.+.++.   .+...|+.|
T Consensus        87 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  166 (297)
T PLN02583         87 DPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALA  166 (297)
T ss_pred             ccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHH
Confidence            754332234567899999999999999998755689999999876531  1   12234454432211   112359999


Q ss_pred             HHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          146 KAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       146 K~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |.++|++++.+. +.+++++++||+++|||+.......+....  ...+.....|+|++|+|++
T Consensus       167 K~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~--~~~~~~~~~~v~V~Dva~a  228 (297)
T PLN02583        167 KTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAA--QMYENGVLVTVDVNFLVDA  228 (297)
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCc--ccCcccCcceEEHHHHHHH
Confidence            999999998886 459999999999999997632211111100  0111223469999999986

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.97  E-value=7e-31  Score=218.66  Aligned_cols=202  Identities=19%  Similarity=0.267  Sum_probs=152.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-CC---CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |||||||||||||++|+++|+++|++|++++|...... ..   ....+++++.+|+.+.     ++.++|+|||+|+..
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~  194 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLACPA  194 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeeeec
Confidence            79999999999999999999999999999987532111 11   1123688899999775     346899999999975


Q ss_pred             CC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc--cccccCChHHHHHHHHHHH
Q 028444           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~~  152 (209)
                      .+  ...++.+.+++|+.++.+|+++|++.+ . +||++||..+|++....+.+|+.+.  .+..+.+.|+.+|.++|++
T Consensus       195 ~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~  272 (442)
T PLN02206        195 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETL  272 (442)
T ss_pred             chhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHH
Confidence            43  334677889999999999999999874 3 8999999999986544445554321  1222346799999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCC-cchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLT-TGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +..+. +.+++++++||+.+|||+... ...++..++.....++         ....|+|++|+|+++
T Consensus       273 ~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai  340 (442)
T PLN02206        273 TMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL  340 (442)
T ss_pred             HHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHH
Confidence            98876 458999999999999997431 2345566666655433         344689999999864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=1.8e-30  Score=227.12  Aligned_cols=205  Identities=22%  Similarity=0.345  Sum_probs=155.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCC--CCCCCC---CCCCceEEEEccCCCHHHHHHHh--cCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT--SDISGL---PSEGALELVYGDVTDYRSLVDAC--FGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~--~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi~   71 (209)
                      |+|||||||||||++++++|+++  +++|++++|..  .+...+   ....+++++.+|++|.+.+..++  .++|+|||
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViH   86 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIMH   86 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEEE
Confidence            68999999999999999999988  68999988742  111111   11237899999999998887765  57999999


Q ss_pred             cCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccc---cCCCccccccccCChHHHHH
Q 028444           72 TAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI---ADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~---~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      +|+....  ...++..++++|+.++.++++++++...+++|||+||..+|+.....+   .+|+.+.   .|.+.|+.+|
T Consensus        87 lAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~---~p~~~Y~~sK  163 (668)
T PLN02260         87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL---LPTNPYSATK  163 (668)
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC---CCCCCcHHHH
Confidence            9997543  234556788999999999999999875478999999999998654321   1222221   2346799999


Q ss_pred             HHHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcC---------CceEEEEEEeeeeecC
Q 028444          147 AVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQ---------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       147 ~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~i  209 (209)
                      .++|.+++.+. +.+++++++||+++|||+... ..+++.++.....+         +....|+|++|+|+++
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~  235 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-EKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAF  235 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-ccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHH
Confidence            99999998876 468999999999999998643 34555555554443         3345789999999864

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=2.4e-30  Score=210.68  Aligned_cols=205  Identities=19%  Similarity=0.236  Sum_probs=151.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCC--CCCC---CCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTS--DISG---LPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~--~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      ||||||||+||||++++++|+++|++ |+++++...  ....   +....++.++.+|++|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            89999999999999999999999976 555554321  1111   1111357889999999999999886  48999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcC--------CccEEEEEccceeeccCCc----------cccCCCcc
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFALGSTDG----------YIADENQV  132 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~i~~ss~~~~~~~~~----------~~~~e~~~  132 (209)
                      |+....  ...++.+++++|+.++.+++++|++.+        +.++||++||..+|+....          .+.+|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            997532  334577899999999999999998741        3468999999999985321          11233322


Q ss_pred             ccccccCChHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcC---------CceEEEEEE
Q 028444          133 HEEKYFCTQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQ---------HFSLVFFHC  202 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  202 (209)
                      .   .|.+.|+.+|.++|.+++.++ +.+++++++||+.+|||+... ..+++.++.....+         +....|+|+
T Consensus       161 ~---~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  236 (352)
T PRK10084        161 Y---APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (352)
T ss_pred             C---CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-cchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence            2   244679999999999999886 458999999999999998632 24555555554433         334568999


Q ss_pred             eeeeecC
Q 028444          203 QITCHAI  209 (209)
Q Consensus       203 ~dva~~i  209 (209)
                      +|+|+++
T Consensus       237 ~D~a~a~  243 (352)
T PRK10084        237 EDHARAL  243 (352)
T ss_pred             HHHHHHH
Confidence            9999874

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.97  E-value=4.9e-30  Score=204.49  Aligned_cols=172  Identities=19%  Similarity=0.202  Sum_probs=137.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      |+||||||+||||++++++|+++| +|++++|...            .+.+|++|.+.+.++++  ++|+|||||+....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            899999999999999999999999 7988887532            23579999999999887  58999999997543


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        +..++...+++|+.++.+|+++|++.+  .++||+||..+|+.....+.+|+.+.   .|.+.|+.+|.++|++++.+
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~Ss~~Vy~~~~~~p~~E~~~~---~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYSTDYVFPGTGDIPWQETDAT---APLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEccceEECCCCCCCcCCCCCC---CCCCHHHHHHHHHHHHHHHh
Confidence              335667778999999999999999884  48999999999987655556565433   23477999999999998776


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS  196 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  196 (209)
                      ..   +.+++||+++|||+.   ..++..+++.+..++..
T Consensus       143 ~~---~~~ilR~~~vyGp~~---~~~~~~~~~~~~~~~~~  176 (299)
T PRK09987        143 CA---KHLIFRTSWVYAGKG---NNFAKTMLRLAKEREEL  176 (299)
T ss_pred             CC---CEEEEecceecCCCC---CCHHHHHHHHHhcCCCe
Confidence            43   579999999999975   35667777666655443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=4.1e-30  Score=205.90  Aligned_cols=204  Identities=21%  Similarity=0.277  Sum_probs=155.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCC-----CCCCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS-----DISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~   72 (209)
                      +|+||||||+||++++++|+++|  ++|++++|...     +...+....+++++.+|++|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999987  78988876321     111111123688999999999999999987  8999999


Q ss_pred             CccCC--CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCcc-ccCCCccccccccCChHHHHHHHH
Q 028444           73 AALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY-IADENQVHEEKYFCTQYERSKAVA  149 (209)
Q Consensus        73 a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~-~~~e~~~~~~~~~~~~Y~~sK~~~  149 (209)
                      |+...  ....++..++++|+.++.++++++.+.....++|++||..+|+..... +.+|..+..   +.+.|+.+|..+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~---~~~~Y~~sK~~~  157 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLA---PSSPYSASKAAS  157 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCC---CCCchHHHHHHH
Confidence            99643  233466778999999999999999886433489999999999865432 344443222   236799999999


Q ss_pred             HHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          150 DKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       150 e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      |.+++.+. +.+++++++||+.+|||+... ..+++.++.....+.         ....|+|++|+|+++
T Consensus       158 e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~  226 (317)
T TIGR01181       158 DHLVRAYHRTYGLPALITRCSNNYGPYQFP-EKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI  226 (317)
T ss_pred             HHHHHHHHHHhCCCeEEEEeccccCCCCCc-ccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHH
Confidence            99998876 468999999999999997643 345666666655443         334789999998763

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.97  E-value=2.7e-30  Score=206.77  Aligned_cols=197  Identities=21%  Similarity=0.228  Sum_probs=139.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHH-HHHhc-----CcCEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSL-VDACF-----GCHVIFHTA   73 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~-~~~~~-----~~d~vi~~a   73 (209)
                      |+||||+||||++|+++|+++|++++++.|+......     ...+.++|+.|.   +.+ ..+++     ++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-----HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            7999999999999999999999987777765432111     012334566554   332 33332     689999999


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                      +.......++..+++.|+.++.+|+++|++.. + +|||+||..+|+...+.+.+|..+.   .|.+.|+.+|.++|+++
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~~~E~~~~---~p~~~Y~~sK~~~E~~~  151 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDFIEEREYE---KPLNVYGYSKFLFDEYV  151 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCCCccCCCC---CCCCHHHHHHHHHHHHH
Confidence            86433333445689999999999999999874 4 6999999999987544344444322   23467999999999999


Q ss_pred             HHHh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC----------ceEEEEEEeeeeecC
Q 028444          154 LQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH----------FSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~----------~~~~~~~~~dva~~i  209 (209)
                      +.+. +.+++++++||+++|||+....   ......+.+....++          ....|+|++|+|+++
T Consensus       152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~  221 (308)
T PRK11150        152 RQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVN  221 (308)
T ss_pred             HHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHH
Confidence            8876 4589999999999999976322   122333334444332          245789999999863

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.97  E-value=1.7e-29  Score=204.59  Aligned_cols=172  Identities=23%  Similarity=0.320  Sum_probs=136.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----C--CCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P--SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |+|+||||+||||++++++|+++|++|++++|........    .  ...++.++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            8999999999999999999999999999987643221110    0  11246788999999999988886  58999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      |+....  ...++...+++|+.++.++++++++. +.++||++||..+|+.....+.+|+.+.  ..+.+.|+.+|.++|
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~~~~~~E~~~~--~~p~~~Y~~sK~~~E  157 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQPKIPYVESFPT--GTPQSPYGKSKLMVE  157 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCCCCccccccCC--CCCCChhHHHHHHHH
Confidence            986432  23455678999999999999999987 4789999999999986544445555432  123477999999999


Q ss_pred             HHHHHHhh--cCCCEEEEecCceecCC
Q 028444          151 KIALQAAS--EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       151 ~~~~~~~~--~~~~~~~~rp~~v~g~~  175 (209)
                      ++++.+.+  .+++++++|++.+|||.
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~g~~  184 (338)
T PRK10675        158 QILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_pred             HHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence            99998864  37899999999999974

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=3e-30  Score=210.99  Aligned_cols=209  Identities=25%  Similarity=0.325  Sum_probs=148.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----------CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |+||||||+||||++++++|+++|++|+++.|+..+.+.+..          ..++.++.+|++|.+.+.++++++|+|+
T Consensus        54 k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d~V~  133 (367)
T PLN02686         54 RLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCAGVF  133 (367)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhccEEE
Confidence            479999999999999999999999999998886543211100          1257889999999999999999999999


Q ss_pred             EcCccCCCCC--CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc--eeeccC--Cc--cccCCCcccc---ccccC
Q 028444           71 HTAALVEPWL--PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF--FALGST--DG--YIADENQVHE---EKYFC  139 (209)
Q Consensus        71 ~~a~~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~--~~~~~~--~~--~~~~e~~~~~---~~~~~  139 (209)
                      |+|+......  ..+....++|+.++.++++++++..++++||++||.  .+|+..  ..  ...+|+.+..   +..+.
T Consensus       134 hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~  213 (367)
T PLN02686        134 HTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK  213 (367)
T ss_pred             ecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhccccc
Confidence            9999753321  122456789999999999999876457899999996  467631  11  2234433221   12234


Q ss_pred             ChHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCc-chhHHHHHHH--HhcCCceEEEEEEeeeeecC
Q 028444          140 TQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRL--LFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~dva~~i  209 (209)
                      +.|+.+|.++|.+++.+. +++++++++||+++|||+.... ...+...+..  ...+.-...|+|++|+|+++
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~  287 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEAH  287 (367)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHHH
Confidence            579999999999998876 4699999999999999975321 1111111111  01122223599999999873

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=5.4e-30  Score=206.35  Aligned_cols=187  Identities=22%  Similarity=0.271  Sum_probs=145.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCC---CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+++||||+||||++++++|+++|  ++|++++|+..+...+   ....++.++.+|++|.+.+.++++++|+|||+||.
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~   84 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAAL   84 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECccc
Confidence            479999999999999999999986  7899998875432111   01136889999999999999999999999999996


Q ss_pred             CCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                      ...  ...++.+++++|+.++.++++++.+. +.++||++||...+.                 |.++|+.+|.++|.++
T Consensus        85 ~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~~-----------------p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        85 KQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAAN-----------------PINLYGATKLASDKLF  146 (324)
T ss_pred             CCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-----------------CCCHHHHHHHHHHHHH
Confidence            422  23456688999999999999999987 467999999853211                 1256999999999988


Q ss_pred             HHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          154 LQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +.++    +.|++++++|||++|||+.    .+++.+......+.         ....|+|++|+|+++
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~  211 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFV  211 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHH
Confidence            7643    4589999999999999964    34555554444333         334689999998864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=2.6e-29  Score=203.67  Aligned_cols=205  Identities=20%  Similarity=0.140  Sum_probs=154.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-----CCCCC-----CCCceEEEEccCCCHHHHHHHhcC--cCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLP-----SEGALELVYGDVTDYRSLVDACFG--CHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   68 (209)
                      |+||||||+||||++++++|+++|++|++++|+...     ++.+.     ...+++++.+|++|.+.+..++++  +|+
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   86 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDE   86 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCCE
Confidence            589999999999999999999999999999986532     11111     113588999999999999988874  799


Q ss_pred             EEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCc----cEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV----EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||||+....  ...++...+++|+.++.++++++++.+..    .+||++||..+||.... +.+|+.+.   .|.+.|
T Consensus        87 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~---~p~~~Y  162 (340)
T PLN02653         87 VYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPF---HPRSPY  162 (340)
T ss_pred             EEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCC---CCCChh
Confidence            9999997432  33456777899999999999999987422    38999999999997554 44454432   234779


Q ss_pred             HHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCC--cchhHHHHHHHHhc----------CCceEEEEEEeeeeecC
Q 028444          143 ERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLFS----------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       143 ~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~~dva~~i  209 (209)
                      +.||.++|.+++.+. +.++++...|+..+|||+...  ....+..++..+..          ++....|+|++|+|+++
T Consensus       163 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~  242 (340)
T PLN02653        163 AVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAM  242 (340)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHH
Confidence            999999999998886 458888889999999996432  12233333333333          23345789999999874

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.97  E-value=6.4e-30  Score=204.16  Aligned_cols=190  Identities=19%  Similarity=0.182  Sum_probs=143.7

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC---
Q 028444            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP---   78 (209)
Q Consensus         4 lItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~---   78 (209)
                      ||||||||||++|+++|+++|++|+++.+.               ..+|++|.+++.++++  ++|+|||||+....   
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            699999999999999999999988766432               1369999999998876  57999999997432   


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcccc-ccccCC-hHHHHHHHHHHHHHHH
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYFCT-QYERSKAVADKIALQA  156 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~-~~~~~~-~Y~~sK~~~e~~~~~~  156 (209)
                      ...++...++.|+.++.+|+++|++. +.+++|++||..+|++....+.+|+.+.. +..|.+ .|+.+|.++|++++++
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~  144 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAY  144 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence            33566778999999999999999987 47899999999999875555566654221 122223 4999999999988877


Q ss_pred             h-hcCCCEEEEecCceecCCCCC---cchhHHHHHHH----Hh----------cCCceEEEEEEeeeeecC
Q 028444          157 A-SEGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRL----LF----------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~-~~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~----~~----------~~~~~~~~~~~~dva~~i  209 (209)
                      . +.+++++++||+.+|||+...   ...+++.++..    ..          .+.....|+|++|+|+++
T Consensus       145 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~  215 (306)
T PLN02725        145 RIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAV  215 (306)
T ss_pred             HHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHH
Confidence            5 458999999999999997531   12233333322    21          234455789999999864

>PLN02996 fatty acyl-CoA reductase

Probab=99.97  E-value=3.7e-29  Score=210.81  Aligned_cols=206  Identities=21%  Similarity=0.242  Sum_probs=150.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEEEcCCCCCC---CCC-----------------C------CCceEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDIS---GLP-----------------S------EGALELVYG   51 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~~r~~~~~~---~~~-----------------~------~~~~~~~~~   51 (209)
                      ++|+|||||||||+.++++|++.+   -+|+++.|.++...   ++.                 .      ..+++++.+
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            479999999999999999998764   36899999764211   000                 0      046899999


Q ss_pred             cCC-------CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc
Q 028444           52 DVT-------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG  124 (209)
Q Consensus        52 Dl~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~  124 (209)
                      |++       +.+.+..+++++|+|||+|+..... .++...+++|+.++.++++++++..+.++|||+||..+||...+
T Consensus        92 Dl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~  170 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG  170 (491)
T ss_pred             ccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc
Confidence            998       4455677888999999999976543 46778899999999999999988645789999999999986432


Q ss_pred             cccCCCccc-----------------------------------------------c--ccccCChHHHHHHHHHHHHHH
Q 028444          125 YIADENQVH-----------------------------------------------E--EKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus       125 ~~~~e~~~~-----------------------------------------------~--~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      .. +|...+                                               +  ...+.+.|+.||+++|+++..
T Consensus       171 ~i-~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~  249 (491)
T PLN02996        171 LI-LEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGN  249 (491)
T ss_pred             ee-eeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHH
Confidence            11 110000                                               0  112346799999999999987


Q ss_pred             HhhcCCCEEEEecCceecCCCCCcchhH------HHHHHHHhc---------CCceEEEEEEeeeeecC
Q 028444          156 AASEGLPIVPVYPGVIYGPGKLTTGNLV------AKLVRLLFS---------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       156 ~~~~~~~~~~~rp~~v~g~~~~~~~~~~------~~~~~~~~~---------~~~~~~~~~~~dva~~i  209 (209)
                      +. .+++++++||+++|||...+...++      ..++.....         ++....++|+||+|+++
T Consensus       250 ~~-~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~  317 (491)
T PLN02996        250 FK-ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAM  317 (491)
T ss_pred             hc-CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHH
Confidence            75 4899999999999999764433333      223332232         34456899999999874

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.96  E-value=6.6e-29  Score=198.97  Aligned_cols=200  Identities=17%  Similarity=0.170  Sum_probs=147.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc----CcCEEEEcCccCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALVE   77 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~~a~~~~   77 (209)
                      |||||||||||++++++|.++|+ +|++++|..... .+... ....+..|+.+.+.+..+.+    ++|+|||+|+...
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL-ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh-hheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            68999999999999999999997 788887654321 11111 12456778888877776654    7999999999765


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                      ....++...+++|+.++.++++++.+.. . +||++||..+|+.......+++.+   ..+.+.|+.+|..+|.+++++.
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~~e~~~~---~~p~~~Y~~sK~~~e~~~~~~~  153 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGFREGREL---ERPLNVYGYSKFLFDQYVRRRV  153 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCcccccCc---CCCCCHHHHHHHHHHHHHHHHh
Confidence            5556677789999999999999999874 3 799999999998654332233221   1245779999999999998753


Q ss_pred             -h--cCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcC---------------CceEEEEEEeeeeecC
Q 028444          158 -S--EGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQ---------------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       158 -~--~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~---------------~~~~~~~~~~dva~~i  209 (209)
                       +  .+++++++||+.+|||+....   ..++..++.....+               +....|+|++|+++++
T Consensus       154 ~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i  226 (314)
T TIGR02197       154 LPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVN  226 (314)
T ss_pred             HhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHH
Confidence             2  257999999999999985321   23455555544433               3345799999999864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=1.1e-28  Score=200.73  Aligned_cols=171  Identities=20%  Similarity=0.247  Sum_probs=136.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-------CCC--CCCceEEEEccCCCHHHHHHHhc--CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLP--SEGALELVYGDVTDYRSLVDACF--GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-------~~~--~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   69 (209)
                      ++|+||||+||||++++++|+++|++|++++|......       ...  ...++.++.+|++|++.+..+++  ++|+|
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v   85 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV   85 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence            37999999999999999999999999999987532110       000  11257899999999999988876  68999


Q ss_pred             EEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        70 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      ||+|+....  ...++.+.+++|+.++.++++++++. +.++||++||..+|+.....+.+|+.+..   +.+.|+.+|.
T Consensus        86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~---~~~~Y~~sK~  161 (352)
T PLN02240         86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQPEEVPCTEEFPLS---ATNPYGRTKL  161 (352)
T ss_pred             EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCCC---CCCHHHHHHH
Confidence            999996432  33466778999999999999999887 46799999999999865555556654332   3467999999


Q ss_pred             HHHHHHHHHhh--cCCCEEEEecCceecCC
Q 028444          148 VADKIALQAAS--EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       148 ~~e~~~~~~~~--~~~~~~~~rp~~v~g~~  175 (209)
                      ++|.+++.+.+  .+++++++|++.+||++
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~  191 (352)
T PLN02240        162 FIEEICRDIHASDPEWKIILLRYFNPVGAH  191 (352)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence            99999988753  47899999999999974

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.96  E-value=3.2e-29  Score=198.33  Aligned_cols=181  Identities=26%  Similarity=0.309  Sum_probs=136.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      ||||||||+|+||++|.++|.++|++|+.++|+                ..|++|.+.+.+.++  ++|+|||||+...+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            999999999999999999999999999998776                249999999999886  58999999997543


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        ++.+++..+++|+.++.+|+++|...+  .++||+||..||.+..+.+..|+....   |.+.||.+|..+|+.++..
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~~~y~E~d~~~---P~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKGGPYTEDDPPN---PLNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSSB-TTS-------SSHHHHHHHHHHHHHHHH
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcccccccCCCCC---CCCHHHHHHHHHHHHHHHh
Confidence              456788999999999999999999874  599999999999877666556654433   3478999999999998874


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce-------EEEEEEeeeeec
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS-------LVFFHCQITCHA  208 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva~~  208 (209)
                      .+   +..++|++++||+..   .+++..++..+..++..       ...++++|+|++
T Consensus       140 ~~---~~~IlR~~~~~g~~~---~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~  192 (286)
T PF04321_consen  140 CP---NALILRTSWVYGPSG---RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARV  192 (286)
T ss_dssp             -S---SEEEEEE-SEESSSS---SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHH
T ss_pred             cC---CEEEEecceecccCC---CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHH
Confidence            33   699999999999943   46788777777765533       356889998875

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.96  E-value=1.8e-28  Score=194.26  Aligned_cols=182  Identities=25%  Similarity=0.260  Sum_probs=142.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCc--CEEEEcCccCCC-
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGC--HVIFHTAALVEP-   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vi~~a~~~~~-   78 (209)
                      ||+|||||||||++++++|+++|++|+++.|+                .+|+.|.+.+.+++++.  |+|||+|+.... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            68999999999999999999999999999875                35999999999998864  999999997432 


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                       ...++...+++|+.++.++++++++..  .++|++||..+|++....+.+|+.+.   .+.+.|+.+|..+|.+++.+ 
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~E~~~~---~~~~~Y~~~K~~~E~~~~~~-  138 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGKRPYREDDAT---NPLNVYGQSKLAGEQAIRAA-  138 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeeecCCCCCCCCCCCCC---CCcchhhHHHHHHHHHHHHh-
Confidence             223456789999999999999998874  38999999999987555555555432   23467999999999988765 


Q ss_pred             hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCc-------eEEEEEEeeeeecC
Q 028444          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHF-------SLVFFHCQITCHAI  209 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~i  209 (209)
                        +.+++++||+++|||+..  ..++..++.....+..       ...++|++|+|+++
T Consensus       139 --~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~  193 (287)
T TIGR01214       139 --GPNALIVRTSWLYGGGGG--RNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVI  193 (287)
T ss_pred             --CCCeEEEEeeecccCCCC--CCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHH
Confidence              678999999999999752  2445555555443332       23568899998763

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=8.8e-28  Score=191.61  Aligned_cols=189  Identities=34%  Similarity=0.489  Sum_probs=150.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCC---CCC--CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS---GLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~---~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++||||+||+|++++++|++++  .+|++++..+....   +..  ....++.+++|+.|..++.++++++ .|+|||+
T Consensus         6 ~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa   84 (361)
T KOG1430|consen    6 SVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHCAA   84 (361)
T ss_pred             EEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEecc
Confidence            69999999999999999999998  89999988664211   111  1347899999999999999999999 8888887


Q ss_pred             cCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc-cccCCCccccccccCChHHHHHHHHHH
Q 028444           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      ...+  ...+++..+++|+.||.+++++|++. +++++||+||..|..+..+ ...+|..+.| ......|+.||+.+|+
T Consensus        85 ~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p-~~~~d~Y~~sKa~aE~  162 (361)
T KOG1430|consen   85 SPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPIINGDESLPYP-LKHIDPYGESKALAEK  162 (361)
T ss_pred             ccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeecccCCCCCCCc-cccccccchHHHHHHH
Confidence            5333  33468889999999999999999999 5899999999999876655 4455555544 4444679999999999


Q ss_pred             HHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce
Q 028444          152 IALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS  196 (209)
Q Consensus       152 ~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  196 (209)
                      +.++.. ..++..+.+||+.+|||++.   .+++.+...+..+...
T Consensus       163 ~Vl~an~~~~l~T~aLR~~~IYGpgd~---~~~~~i~~~~~~g~~~  205 (361)
T KOG1430|consen  163 LVLEANGSDDLYTCALRPPGIYGPGDK---RLLPKIVEALKNGGFL  205 (361)
T ss_pred             HHHHhcCCCCeeEEEEccccccCCCCc---cccHHHHHHHHccCce
Confidence            999987 45789999999999999973   4455555555544443

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.96  E-value=1.2e-27  Score=192.34  Aligned_cols=203  Identities=24%  Similarity=0.317  Sum_probs=151.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCCC---CCceEEEEccCCCHHHHHHHhc--CcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPS---EGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~   75 (209)
                      ||+||||+|+||++++++|+++|++|++++|..... .....   ..+++++.+|+++.+.+.++++  ++|+|||+|+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            689999999999999999999999999887643221 11111   1157788999999999998886  69999999997


Q ss_pred             CCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                      ...  ...++.+.++.|+.++.++++++.+. +.+++|++||..+|+.....+.+|+.+..   +.+.|+.+|..+|.++
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~~~~~e~~~~~---~~~~y~~sK~~~e~~~  156 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSSIPISEDSPLG---PINPYGRSKLMSERIL  156 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCCCCccccCCCC---CCCchHHHHHHHHHHH
Confidence            432  33456678999999999999999887 46799999999999865444455544322   3367999999999999


Q ss_pred             HHHhh--cCCCEEEEecCceecCCCCC--------cchhHHHHHHHHh----------------cCCceEEEEEEeeeee
Q 028444          154 LQAAS--EGLPIVPVYPGVIYGPGKLT--------TGNLVAKLVRLLF----------------SQHFSLVFFHCQITCH  207 (209)
Q Consensus       154 ~~~~~--~~~~~~~~rp~~v~g~~~~~--------~~~~~~~~~~~~~----------------~~~~~~~~~~~~dva~  207 (209)
                      +.+.+  .+++++++||+.+|||....        ...++..+.....                .+.....|+|++|+++
T Consensus       157 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~  236 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLAD  236 (328)
T ss_pred             HHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHH
Confidence            88764  58999999999999985321        1233444433332                1233457999999998


Q ss_pred             c
Q 028444          208 A  208 (209)
Q Consensus       208 ~  208 (209)
                      +
T Consensus       237 ~  237 (328)
T TIGR01179       237 A  237 (328)
T ss_pred             H
Confidence            6

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.96  E-value=5.9e-28  Score=183.10  Aligned_cols=201  Identities=21%  Similarity=0.276  Sum_probs=160.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++|+||||+||||++|+++|..+|++|++++.-....+.    ......++.+.-|+..+     ++.++|.|+|+|++.
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLAapa  102 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLAAPA  102 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhccCC
Confidence            589999999999999999999999999999864332221    12224677777777654     788999999999986


Q ss_pred             CC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc--cccccCChHHHHHHHHHHH
Q 028444           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~~  152 (209)
                      .+  ...++.+.+..|..++.+++..+++.+  +||++.||+.+||.+...+..|..+.  .+..+.+.|...|..+|++
T Consensus       103 sp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L  180 (350)
T KOG1429|consen  103 SPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETL  180 (350)
T ss_pred             CCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHH
Confidence            55  456788999999999999999999874  79999999999998776666665543  2344567899999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCC-CCcchhHHHHHHHHhc---------CCceEEEEEEeeeeec
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGK-LTTGNLVAKLVRLLFS---------QHFSLVFFHCQITCHA  208 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~  208 (209)
                      +..+. +.|+.+.+.|+.+.|||.- +..++.++.++.+.++         |.+...|.+++|++++
T Consensus       181 ~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Veg  247 (350)
T KOG1429|consen  181 CYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEG  247 (350)
T ss_pred             HHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHH
Confidence            99987 5699999999999999954 2335667777777664         5566789999998765

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=1.6e-27  Score=184.21  Aligned_cols=180  Identities=26%  Similarity=0.281  Sum_probs=149.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccC--
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV--   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~--   76 (209)
                      |+|||||++|++|++|++.|. .+++|+.++|..                .|++|++.+.++++  ++|+|||+|+++  
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~v   63 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAV   63 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECcccccc
Confidence            899999999999999999997 679999988764                49999999999997  589999999985  


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                      +..+.+++..+.+|..++.+++++|.+.+  ..+||+||..|+.+..+.+..|++...   |.+.||.||.++|+..+..
T Consensus        64 D~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~~Y~E~D~~~---P~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          64 DKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGGPYKETDTPN---PLNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             ccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCCCCCCCCCCC---ChhhhhHHHHHHHHHHHHh
Confidence            45677888999999999999999999985  599999999999877765555554433   3477999999999998875


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEE-------EEEEeeeeec
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLV-------FFHCQITCHA  208 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~dva~~  208 (209)
                      .   -+..++|.+|+||...   .+|+..|++....++....       ..+..|+|++
T Consensus       139 ~---~~~~I~Rtswv~g~~g---~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~  191 (281)
T COG1091         139 G---PRHLILRTSWVYGEYG---NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADA  191 (281)
T ss_pred             C---CCEEEEEeeeeecCCC---CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHH
Confidence            4   4589999999999865   6788888888887765543       3566666654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.95  E-value=6.3e-28  Score=182.90  Aligned_cols=204  Identities=19%  Similarity=0.305  Sum_probs=161.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEc-----CCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVR-----RTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      +++||||.||||+..+..+...-  ++.+.++.     +...+++....++..++++|+.+...+..++.  ++|.|+|.
T Consensus         8 ~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vihf   87 (331)
T KOG0747|consen    8 NVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIHF   87 (331)
T ss_pred             eEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhhh
Confidence            68999999999999999998763  55555543     11122223333689999999999998888775  68999999


Q ss_pred             CccC--CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccC-CCccccccccCChHHHHHHHH
Q 028444           73 AALV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD-ENQVHEEKYFCTQYERSKAVA  149 (209)
Q Consensus        73 a~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~-e~~~~~~~~~~~~Y~~sK~~~  149 (209)
                      |+.+  ..+..++....+.|+.++..|+++++..+++++|||+||..|||+....... |.....|   .++|+++|+++
T Consensus        88 aa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nP---tnpyAasKaAa  164 (331)
T KOG0747|consen   88 AAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNP---TNPYAASKAAA  164 (331)
T ss_pred             HhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCC---CCchHHHHHHH
Confidence            9974  3345677788999999999999999999888999999999999987654444 5444433   47899999999


Q ss_pred             HHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhc---------CCceEEEEEEeeeeecC
Q 028444          150 DKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFS---------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       150 e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~i  209 (209)
                      |++.+.+. +++++++++|-++||||++.. ...++.+++....         |.....|+|++|+++|+
T Consensus       165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~-~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~  233 (331)
T KOG0747|consen  165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYP-EKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAF  233 (331)
T ss_pred             HHHHHHHhhccCCcEEEEeccCccCCCcCh-HHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHH
Confidence            99999986 679999999999999999865 4677777775443         44556899999999874

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.95  E-value=2.3e-28  Score=190.11  Aligned_cols=203  Identities=31%  Similarity=0.465  Sum_probs=124.3

Q ss_pred             EEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCC---CCCC----C-----------CCCceEEEEccCCCH------HH
Q 028444            5 VSGASGYLGGRLCHALLKQGH--SVRALVRRTSD---ISGL----P-----------SEGALELVYGDVTDY------RS   58 (209)
Q Consensus         5 ItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~---~~~~----~-----------~~~~~~~~~~Dl~~~------~~   58 (209)
                      |||||||+|++++++|++++.  +|+++.|.+..   .+++    .           ...+++++.+|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  99999997642   0111    0           025899999999974      45


Q ss_pred             HHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccc------cCCCcc
Q 028444           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI------ADENQV  132 (209)
Q Consensus        59 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~------~~e~~~  132 (209)
                      +..+.+++|+|||||+..+.. ....+.++.|+.|+.++++.|.... .++|+|+||..+.+...+..      .++...
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~  158 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDL  158 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--EE
T ss_pred             hhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccccccc
Confidence            667778999999999976544 3556789999999999999999663 45999999954544333221      122222


Q ss_pred             ccccccCChHHHHHHHHHHHHHHHhhc-CCCEEEEecCceecCCCC---CcchhHHHHHHH-HhcCCc---------eEE
Q 028444          133 HEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKL---TTGNLVAKLVRL-LFSQHF---------SLV  198 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~rp~~v~g~~~~---~~~~~~~~~~~~-~~~~~~---------~~~  198 (209)
                      .+.....+.|..||.++|.+++++.+. |+++.++|||.++|....   ....+...++.. ...+..         ...
T Consensus       159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d  238 (249)
T PF07993_consen  159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLD  238 (249)
T ss_dssp             E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--
T ss_pred             hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEe
Confidence            333334468999999999999998765 999999999999994221   223323333333 332332         267


Q ss_pred             EEEEeeeeecC
Q 028444          199 FFHCQITCHAI  209 (209)
Q Consensus       199 ~~~~~dva~~i  209 (209)
                      ++++|.+|++|
T Consensus       239 ~vPVD~va~aI  249 (249)
T PF07993_consen  239 LVPVDYVARAI  249 (249)
T ss_dssp             EEEHHHHHHHH
T ss_pred             EECHHHHHhhC
Confidence            89999999875

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.4e-27  Score=203.89  Aligned_cols=203  Identities=26%  Similarity=0.326  Sum_probs=145.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHH--hCCCeEEEEEcCCCCC--CCC---CCCCceEEEEccCCCH------HHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALL--KQGHSVRALVRRTSDI--SGL---PSEGALELVYGDVTDY------RSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~--~~g~~V~~~~r~~~~~--~~~---~~~~~~~~~~~Dl~~~------~~~~~~~~~~d   67 (209)
                      |+|||||||||||++++++|+  ++|++|++++|+....  ..+   ....+++++.+|++|+      +.+..+ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            899999999999999999999  5799999999964321  000   0113689999999984      445555 8999


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      +|||||+..... ..+...+++|+.++.++++++.+. +.++|||+||..+|+...+. .+|+.......+.+.|+.+|.
T Consensus        80 ~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~-~~e~~~~~~~~~~~~Y~~sK~  156 (657)
T PRK07201         80 HVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGV-FREDDFDEGQGLPTPYHRTKF  156 (657)
T ss_pred             EEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCc-cccccchhhcCCCCchHHHHH
Confidence            999999975432 344567899999999999999987 47899999999999865433 233332222233467999999


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCcc------hhHHHHHHHHh----------cCCceEEEEEEeeeeecC
Q 028444          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG------NLVAKLVRLLF----------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       148 ~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~------~~~~~~~~~~~----------~~~~~~~~~~~~dva~~i  209 (209)
                      .+|.++++  ..+++++++||+++|||...+..      .++..++..+.          .+.....++|++|+|+++
T Consensus       157 ~~E~~~~~--~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai  232 (657)
T PRK07201        157 EAEKLVRE--ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADAL  232 (657)
T ss_pred             HHHHHHHH--cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHH
Confidence            99998875  35899999999999998653211      11222222221          112235789999998763

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.95  E-value=1.3e-27  Score=191.97  Aligned_cols=182  Identities=21%  Similarity=0.277  Sum_probs=137.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+|||||||||++++++|+++|++|++++|+..+...+.. .+++++.+|++|++++..+++++|+|||+++..   .
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~---~   76 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTSR---P   76 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC---C
Confidence            899999999999999999999999999999998654332222 379999999999999999999999999998632   2


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                      .++..++++|+.++.++++++++. ++++||++||.....    ..            ..+|..+|..+|++++.   .+
T Consensus        77 ~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~----~~------------~~~~~~~K~~~e~~l~~---~~  136 (317)
T CHL00194         77 SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQ----YP------------YIPLMKLKSDIEQKLKK---SG  136 (317)
T ss_pred             CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccc----cC------------CChHHHHHHHHHHHHHH---cC
Confidence            345567889999999999999988 578999999853321    00            13488899999887653   58


Q ss_pred             CCEEEEecCceecCCCCCcchhHHHHHH----HHhcCCceEEEEEEeeeeecC
Q 028444          161 LPIVPVYPGVIYGPGKLTTGNLVAKLVR----LLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       161 ~~~~~~rp~~v~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~dva~~i  209 (209)
                      ++++++||+.+|+.-.   ..+....+.    ....+..+..|+|++|+|+++
T Consensus       137 l~~tilRp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  186 (317)
T CHL00194        137 IPYTIFRLAGFFQGLI---SQYAIPILEKQPIWITNESTPISYIDTQDAAKFC  186 (317)
T ss_pred             CCeEEEeecHHhhhhh---hhhhhhhccCCceEecCCCCccCccCHHHHHHHH
Confidence            9999999998886411   111111110    011244456788999998763

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.95  E-value=1.2e-26  Score=189.10  Aligned_cols=206  Identities=26%  Similarity=0.342  Sum_probs=147.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCC---C---------CC--C-C-CceEEEEccCCCH------H
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS---G---------LP--S-E-GALELVYGDVTDY------R   57 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~---~---------~~--~-~-~~~~~~~~Dl~~~------~   57 (209)
                      +|+|||||||||++++++|+++|  ++|+++.|+.....   +         +.  . . .+++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  77999999765210   0         00  0 0 3789999999853      4


Q ss_pred             HHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcc--ccc
Q 028444           58 SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV--HEE  135 (209)
Q Consensus        58 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~--~~~  135 (209)
                      .+..+..++|+|||||+..... ..+...++.|+.++.++++++.+. +.++|+++||..+|+.....+..++..  ...
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~-~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~  158 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWV-YPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLSTVTEDDAIVTPP  158 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccC-CcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCCccccccccccc
Confidence            5666778899999999975432 345567889999999999999987 467799999999997643222122211  111


Q ss_pred             cccCChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCC---cchhHHHHHHHHhc-C-----C-ceEEEEEEeee
Q 028444          136 KYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRLLFS-Q-----H-FSLVFFHCQIT  205 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~~~~-~-----~-~~~~~~~~~dv  205 (209)
                      ..+.+.|+.+|..+|.+++.+.+.|++++++|||.++|+...+   ...++..++..... +     . ....++|++|+
T Consensus       159 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddv  238 (367)
T TIGR01746       159 PGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYV  238 (367)
T ss_pred             cccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHH
Confidence            2234679999999999998877779999999999999973321   22344444443221 1     1 13458999999


Q ss_pred             eecC
Q 028444          206 CHAI  209 (209)
Q Consensus       206 a~~i  209 (209)
                      |+++
T Consensus       239 a~ai  242 (367)
T TIGR01746       239 ARAI  242 (367)
T ss_pred             HHHH
Confidence            8763

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.94  E-value=1.2e-26  Score=178.36  Aligned_cols=161  Identities=22%  Similarity=0.272  Sum_probs=131.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++|||||++||++++++|+++|++|+++.|+.+++.++.++      ..++++.+|+++++++..+.+       .+|+
T Consensus         8 ~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv   87 (265)
T COG0300           8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV   87 (265)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence            799999999999999999999999999999998876654432      357899999999999887664       5899


Q ss_pred             EEEcCccC------CCCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +|||||+.      +.+.++..+++++|+.++..|..++.+.+   +.++||+++|..++-+.+..              
T Consensus        88 LVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~--------------  153 (265)
T COG0300          88 LVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYM--------------  153 (265)
T ss_pred             EEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcch--------------
Confidence            99999973      22334556789999999999999987653   34689999999887654322              


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +.|++||+    ++|.+..|+...|++|..+.||.+.++..
T Consensus       154 avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~  194 (265)
T COG0300         154 AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFF  194 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccc
Confidence            45999999    56666666767799999999999998743

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.94  E-value=5e-26  Score=180.43  Aligned_cols=197  Identities=19%  Similarity=0.236  Sum_probs=132.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC---C
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP---W   79 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~---~   79 (209)
                      ||||||+||||++++++|+++|++|++++|+..+......   ..  ..|+.. ..+...+.++|+|||+|+....   +
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW---EG--YKPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc---ee--eecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            6899999999999999999999999999998765433211   11  112222 3445667899999999996432   1


Q ss_pred             C-CCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           80 L-PDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        80 ~-~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                      . ..+..++++|+.++.++++++++... ...+|++||..+|+.....+.+|+.+..+   .+.|+..+...|.....+.
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~---~~~~~~~~~~~e~~~~~~~  151 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAG---DDFLAELCRDWEEAAQAAE  151 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCC---CChHHHHHHHHHHHhhhch
Confidence            1 23456788999999999999998743 23577788888898655445555542211   1335555555666555444


Q ss_pred             hcCCCEEEEecCceecCCCCCcchhHHHHHHH-----HhcCCceEEEEEEeeeeecC
Q 028444          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRL-----LFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~dva~~i  209 (209)
                      +.+++++++||+.+|||+......... .+..     .-.++....|+|++|+|+++
T Consensus       152 ~~~~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~i~v~Dva~~i  207 (292)
T TIGR01777       152 DLGTRVVLLRTGIVLGPKGGALAKMLP-PFRLGLGGPLGSGRQWFSWIHIEDLVQLI  207 (292)
T ss_pred             hcCCceEEEeeeeEECCCcchhHHHHH-HHhcCcccccCCCCcccccEeHHHHHHHH
Confidence            568999999999999996421111111 1111     11355667899999999864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.1e-26  Score=181.58  Aligned_cols=157  Identities=23%  Similarity=0.177  Sum_probs=120.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      ++|||||+|+||++++++|+++|++|+++.|+.+..+.+..  ..++.++++|++|.+++.++++       ++|+||||
T Consensus         4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   83 (276)
T PRK06482          4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSN   83 (276)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999999997654332211  1368899999999998877654       47999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++.+.+++|+.++.++++++.+.   .+.++||++||.......+              +.+.|+
T Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~Y~  149 (276)
T PRK06482         84 AGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYP--------------GFSLYH  149 (276)
T ss_pred             CCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCC--------------CCchhH
Confidence            997432      12345678899999999999998442   2357899999975432211              125699


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCcee
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIY  172 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~  172 (209)
                      .+|.+.+.+.+.++    +.+++++++|||.+.
T Consensus       150 ~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~  182 (276)
T PRK06482        150 ATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPAR  182 (276)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCccc
Confidence            99998888777664    358999999999983

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=1.8e-25  Score=172.99  Aligned_cols=170  Identities=22%  Similarity=0.334  Sum_probs=143.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC----CCC----CCCCCceEEEEccCCCHHHHHHHhc--CcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISG----LPSEGALELVYGDVTDYRSLVDACF--GCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~----~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   70 (209)
                      ++||||||+||||++.+-+|+++|+.|++++.-...    +++    ..+..++.++++|++|.+.++++++  +.|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            479999999999999999999999999999863221    111    1112579999999999999999997  589999


Q ss_pred             EcCcc--CCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           71 HTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        71 ~~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      |.|+.  ...+.++|..++..|+.++.++++.++++. .+.+|+.||+.+||.+...|..|+.+..  -|.++|+.+|.+
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~~t~--~p~~pyg~tK~~  159 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEEDPTD--QPTNPYGKTKKA  159 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcCCCC--CCCCcchhhhHH
Confidence            99996  355678889999999999999999999995 8999999999999998888877765443  234779999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceec
Q 028444          149 ADKIALQAAS-EGLPIVPVYPGVIYG  173 (209)
Q Consensus       149 ~e~~~~~~~~-~~~~~~~~rp~~v~g  173 (209)
                      .|+....+.. .+..+..||.++++|
T Consensus       160 iE~i~~d~~~~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  160 IEEIIHDYNKAYGWKVTGLRYFNVIG  185 (343)
T ss_pred             HHHHHHhhhccccceEEEEEeccccC
Confidence            9999999864 478999999999999

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=4.3e-25  Score=175.85  Aligned_cols=178  Identities=13%  Similarity=0.141  Sum_probs=126.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      |+||||||+||||++|+++|+++|++|+...                   .|+.|.+.+...++  ++|+|||+|+....
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~   70 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVTGR   70 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCcccCC
Confidence            7999999999999999999999999987531                   24556666666555  68999999997532


Q ss_pred             -----CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC------ccccCCCccccccccCChHHHHHH
Q 028444           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD------GYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~------~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                           +..++.+++++|+.++.+|+++|++.+ .+ ++++||..+|+...      +.+..|+..+  ..+.+.|+.+|.
T Consensus        71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p--~~~~s~Yg~sK~  146 (298)
T PLN02778         71 PNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTP--NFTGSFYSKTKA  146 (298)
T ss_pred             CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCC--CCCCCchHHHHH
Confidence                 235677899999999999999999874 54 56667777776422      1123333221  123367999999


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceE----EEEEEeeeeecC
Q 028444          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSL----VFFHCQITCHAI  209 (209)
Q Consensus       148 ~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~dva~~i  209 (209)
                      ++|.+++.+.    +...+|++..++++...    ...++..++.++...    .++|++|+++++
T Consensus       147 ~~E~~~~~y~----~~~~lr~~~~~~~~~~~----~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al  204 (298)
T PLN02778        147 MVEELLKNYE----NVCTLRVRMPISSDLSN----PRNFITKITRYEKVVNIPNSMTILDELLPIS  204 (298)
T ss_pred             HHHHHHHHhh----ccEEeeecccCCccccc----HHHHHHHHHcCCCeeEcCCCCEEHHHHHHHH
Confidence            9999998765    35678888878865321    223455556555432    378999998653

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.93  E-value=6.3e-26  Score=170.03  Aligned_cols=158  Identities=27%  Similarity=0.290  Sum_probs=126.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC---CceEEEEccCCCHHHHHHHh-------cCcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDAC-------FGCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~   71 (209)
                      .++|||||++||.+++++|++.|++|++..|+.++++++..+   ..+..+..|++|.+++..++       .++|++||
T Consensus         8 v~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvN   87 (246)
T COG4221           8 VALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVN   87 (246)
T ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEe
Confidence            589999999999999999999999999999999887765543   24889999999998865554       36899999


Q ss_pred             cCccCC------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||...      ...++|++++++|+.|..+.++++.+.+   +...+|++||..+.-+.++.              +.|
T Consensus        88 NAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~--------------~vY  153 (246)
T COG4221          88 NAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGG--------------AVY  153 (246)
T ss_pred             cCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCC--------------ccc
Confidence            999642      2345788999999999999999998764   23589999998654333222              449


Q ss_pred             HHHHHHHHHHH----HHHhhcCCCEEEEecCceec
Q 028444          143 ERSKAVADKIA----LQAASEGLPIVPVYPGVIYG  173 (209)
Q Consensus       143 ~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g  173 (209)
                      +.+|++...+.    +++..++++++.+.||.+-+
T Consensus       154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~  188 (246)
T COG4221         154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVET  188 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecc
Confidence            99999555544    44445689999999999954

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=1.6e-25  Score=166.26  Aligned_cols=177  Identities=32%  Similarity=0.465  Sum_probs=138.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCCCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPD   82 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~   82 (209)
                      |+|+||||++|++++++|+++|++|+++.|++.+.+.   ..+++++++|+.|.+.+.++++++|+||++++....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            7999999999999999999999999999999876554   348999999999999999999999999999984221    


Q ss_pred             ccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcCCC
Q 028444           83 PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP  162 (209)
Q Consensus        83 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~  162 (209)
                             +...+.++++++++. +.+++|++||..+|...............     ..|...|..+|+.++   +.+++
T Consensus        74 -------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~e~~~~---~~~~~  137 (183)
T PF13460_consen   74 -------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFSDEDKPIF-----PEYARDKREAEEALR---ESGLN  137 (183)
T ss_dssp             -------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEEGGTCGGG-----HHHHHHHHHHHHHHH---HSTSE
T ss_pred             -------ccccccccccccccc-ccccceeeeccccCCCCCcccccccccch-----hhhHHHHHHHHHHHH---hcCCC
Confidence                   277889999999998 58899999999988754432111111111     348888888877764   35899


Q ss_pred             EEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeecC
Q 028444          163 IVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       163 ~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  209 (209)
                      ++++||+++||+... ...+...      .+.....+++.+|+|+++
T Consensus       138 ~~ivrp~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~DvA~~~  177 (183)
T PF13460_consen  138 WTIVRPGWIYGNPSR-SYRLIKE------GGPQGVNFISREDVAKAI  177 (183)
T ss_dssp             EEEEEESEEEBTTSS-SEEEESS------TSTTSHCEEEHHHHHHHH
T ss_pred             EEEEECcEeEeCCCc-ceeEEec------cCCCCcCcCCHHHHHHHH
Confidence            999999999998743 2222221      445556899999998763

...

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.93  E-value=1e-24  Score=179.59  Aligned_cols=152  Identities=24%  Similarity=0.359  Sum_probs=123.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC------C-CCCCceEEEEccCCCHHHHHHHhc----CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------L-PSEGALELVYGDVTDYRSLVDACF----GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~------~-~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~v   69 (209)
                      |+|+||||||+||++++++|+++|++|++++|+..+...      . ....+++++++|++|.+.+.++++    ++|+|
T Consensus        61 ~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~V  140 (390)
T PLN02657         61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVV  140 (390)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEE
Confidence            589999999999999999999999999999998653321      0 112378999999999999999887    59999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHH
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (209)
                      |||++...   ......+++|+.++.++++++++. +.++||++||..+|.+                 ...|..+|..+
T Consensus       141 i~~aa~~~---~~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~p-----------------~~~~~~sK~~~  199 (390)
T PLN02657        141 VSCLASRT---GGVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQKP-----------------LLEFQRAKLKF  199 (390)
T ss_pred             EECCccCC---CCCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccCc-----------------chHHHHHHHHH
Confidence            99988422   122356789999999999999987 5789999999876532                 13488899999


Q ss_pred             HHHHHHHhhcCCCEEEEecCceecC
Q 028444          150 DKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       150 e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      |..++. .+.+++++++||+.+|++
T Consensus       200 E~~l~~-~~~gl~~tIlRp~~~~~~  223 (390)
T PLN02657        200 EAELQA-LDSDFTYSIVRPTAFFKS  223 (390)
T ss_pred             HHHHHh-ccCCCCEEEEccHHHhcc
Confidence            887765 346899999999999975

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8e-26  Score=176.38  Aligned_cols=161  Identities=20%  Similarity=0.200  Sum_probs=124.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+.+.+     ..++.++.+|++|.+++..+++       ++|+
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            479999999999999999999999999999998654322211     1357899999999998876663       5799


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||+||...+       ..+++.+.+++|+.++..+++++.+.+  ..++||++||...+.+..+              .
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~  151 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK--------------Y  151 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC--------------c
Confidence            9999986422       223456789999999999999997643  2258999999765433221              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.++    ++++++++++||.++||.
T Consensus       152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~  191 (258)
T PRK07890        152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP  191 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence            459999998777776654    458999999999999985

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.93  E-value=6.6e-26  Score=176.15  Aligned_cols=172  Identities=26%  Similarity=0.327  Sum_probs=130.4

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCC----C---CCCCceE----EEEccCCCHHHHHHHhc--CcCE
Q 028444            3 ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----L---PSEGALE----LVYGDVTDYRSLVDACF--GCHV   68 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~---~~~~~~~----~~~~Dl~~~~~~~~~~~--~~d~   68 (209)
                      ||||||+|.||++|+++|++.+ .++++++|++..+..    +   ....++.    .+.+|++|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999988 689999998653211    1   0112343    45899999999999998  8999


Q ss_pred             EEEcCccC--CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           69 IFHTAALV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        69 vi~~a~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      |+|+|+.-  ...+.+|.+..++|+.||.++++++.++ ++++||++||..+..+                 .+.||+||
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~P-----------------tnvmGatK  142 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNP-----------------TNVMGATK  142 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS-------------------SHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCC-----------------CcHHHHHH
Confidence            99999962  3356789999999999999999999998 5899999999765432                 16699999


Q ss_pred             HHHHHHHHHHhhc----CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce
Q 028444          147 AVADKIALQAASE----GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS  196 (209)
Q Consensus       147 ~~~e~~~~~~~~~----~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  196 (209)
                      .++|.+...++..    +.++.++|.|+|.|..    +++++.+.+++..|.+.
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~Pl  192 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPL  192 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSE
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCC----CcHHHHHHHHHHcCCcc
Confidence            9999999998743    4789999999999974    57788888888877654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK06128 oxidoreductase; Provisional

Probab=99.93  E-value=2.8e-25  Score=177.28  Aligned_cols=162  Identities=19%  Similarity=0.197  Sum_probs=125.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CCC----CC-CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++|||||+|+||++++++|+++|++|++.+++...  .+.    +. ...++.++.+|++|.+++.++++       ++
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  135 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGL  135 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCC
Confidence            369999999999999999999999999988775431  111    10 11257889999999988877664       58


Q ss_pred             CEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |+||||||....       ..+++++++++|+.++..+++++.+.+. ..+||++||..+|.+....             
T Consensus       136 D~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------------  202 (300)
T PRK06128        136 DILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL-------------  202 (300)
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc-------------
Confidence            999999996321       2245678899999999999999987642 3589999998887543221             


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                       ..|+.+|.+.+.+.+.++    ++|+++++++||++++|..
T Consensus       203 -~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~  243 (300)
T PRK06128        203 -LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQ  243 (300)
T ss_pred             -hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCc
Confidence             349999997777766654    4689999999999999853

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=2.4e-25  Score=173.94  Aligned_cols=191  Identities=15%  Similarity=0.118  Sum_probs=135.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC---CCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~---~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+....+   ++.. ...+.++.+|++|.+++.++++       ++|+||
T Consensus        10 ~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   89 (260)
T PRK12823         10 VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLI   89 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            6999999999999999999999999999998742110   1111 1257789999999988776664       589999


Q ss_pred             EcCccC---CC----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           71 HTAALV---EP----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        71 ~~a~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||..   .+    ..+++.+.+++|+.++..+++.+.+.+   +.++||++||...++..                ..
T Consensus        90 ~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------------~~  153 (260)
T PRK12823         90 NNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN----------------RV  153 (260)
T ss_pred             ECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC----------------CC
Confidence            999853   11    223456778999999998888776532   34689999998765321                13


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCC----------CcchhHHHHHHHHhcCCceEEEEEEeeee
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKL----------TTGNLVAKLVRLLFSQHFSLVFFHCQITC  206 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~dva  206 (209)
                      +|+.+|.+.+.+.+.++    ++++++++++||++++|...          ........+......+.+...+.+++|+|
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  233 (260)
T PRK12823        154 PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQV  233 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHH
Confidence            49999997777766654    45899999999999997310          01122344444455455555667788877


Q ss_pred             ec
Q 028444          207 HA  208 (209)
Q Consensus       207 ~~  208 (209)
                      ++
T Consensus       234 ~~  235 (260)
T PRK12823        234 AA  235 (260)
T ss_pred             HH
Confidence            65

>PRK06182 short chain dehydrogenase; Validated

Probab=99.93  E-value=1.9e-25  Score=175.81  Aligned_cols=160  Identities=26%  Similarity=0.204  Sum_probs=123.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++.+.. .++.++++|++|.+++.++++       ++|+|||||
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a   82 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA   82 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            379999999999999999999999999999998765443322 258899999999999887775       689999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..++++..+++|+.++..+++.+.+.+   +.+++|++||...+...+.              ...|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  148 (273)
T PRK06182         83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPL--------------GAWYHA  148 (273)
T ss_pred             CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCC--------------ccHhHH
Confidence            96422      223567789999999888877665432   3468999999754322111              134999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      +|++.+.+.+.+    .+.++++++++||++.+|.
T Consensus       149 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  183 (273)
T PRK06182        149 TKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW  183 (273)
T ss_pred             HHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence            999888765543    4568999999999999984

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.93  E-value=1.2e-25  Score=175.48  Aligned_cols=193  Identities=23%  Similarity=0.164  Sum_probs=136.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.+..  ...+.++++|++|.+++..+++       ++|+||||
T Consensus         8 ~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   87 (257)
T PRK07067          8 VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNN   87 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998654332111  1258889999999999877765       58999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |+....      ..+++++++++|+.++..+++++.+.+    ...+||++||.....+.+              +...|
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~Y  153 (257)
T PRK07067         88 AALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA--------------LVSHY  153 (257)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC--------------CCchh
Confidence            996422      123566789999999999999987542    125799999964322111              12459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchh--------HHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNL--------VAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +.+|.+.+.+.+.+    .++++++++++||+++||........        ..........+.+...+.+++|+|++
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  231 (257)
T PRK07067        154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGM  231 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHH
Confidence            99999777666554    34689999999999999853211111        11111222233344467788888765

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.93  E-value=1.4e-24  Score=185.10  Aligned_cols=207  Identities=18%  Similarity=0.219  Sum_probs=145.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC---eEEEEEcCCCCCC-------CCC-------------------CCCceEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDIS-------GLP-------------------SEGALELVYG   51 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~r~~~~~~-------~~~-------------------~~~~~~~~~~   51 (209)
                      ++|+|||||||||+.|+++|++.+.   +|+++.|.+....       ++.                   ...++.++.+
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G  199 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG  199 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence            5799999999999999999998753   6899999654210       100                   0136889999


Q ss_pred             cCCCH------HHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCcc
Q 028444           52 DVTDY------RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY  125 (209)
Q Consensus        52 Dl~~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~  125 (209)
                      |++++      +....+.+++|+|||+|+.... ..+++..+++|+.++.++++.+++..+.++|||+||..+|+...+.
T Consensus       200 Dl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f-~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~  278 (605)
T PLN02503        200 NVCESNLGLEPDLADEIAKEVDVIINSAANTTF-DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGR  278 (605)
T ss_pred             eCCCcccCCCHHHHHHHHhcCCEEEECcccccc-ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCe
Confidence            99986      4556666789999999997653 3567788999999999999999887556789999999999875422


Q ss_pred             ccCCCcc-----------------------------------c--------------------cccccCChHHHHHHHHH
Q 028444          126 IADENQV-----------------------------------H--------------------EEKYFCTQYERSKAVAD  150 (209)
Q Consensus       126 ~~~e~~~-----------------------------------~--------------------~~~~~~~~Y~~sK~~~e  150 (209)
                      ..++..+                                   .                    ....+++.|..+|+++|
T Consensus       279 i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE  358 (605)
T PLN02503        279 IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGE  358 (605)
T ss_pred             eeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHH
Confidence            2111110                                   0                    00223478999999999


Q ss_pred             HHHHHHhhcCCCEEEEecCce----------ecCCCCCcchhHHHHHHH-----HhcCCceEEEEEEeeeeecC
Q 028444          151 KIALQAASEGLPIVPVYPGVI----------YGPGKLTTGNLVAKLVRL-----LFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       151 ~~~~~~~~~~~~~~~~rp~~v----------~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~dva~~i  209 (209)
                      +++++.. .+++++++||+.|          |+++.......+....+.     ...++....++++|.+++++
T Consensus       359 ~lV~~~~-~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~  431 (605)
T PLN02503        359 MVINSMR-GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNAT  431 (605)
T ss_pred             HHHHHhc-CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHH
Confidence            9998654 4799999999999          555432111111100000     11234566789999988764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-25  Score=175.14  Aligned_cols=192  Identities=19%  Similarity=0.140  Sum_probs=135.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+...    . ..++.++++|++|.+++..+++       .+|+|
T Consensus        12 ~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   91 (255)
T PRK07523         12 RALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDIL   91 (255)
T ss_pred             EEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            7999999999999999999999999999999765332211    1 1247889999999999887765       47999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||+||...+      ..+++++++++|+.++.++++++.+.+   +.+++|++||...+.+..+              ..
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------~~  157 (255)
T PRK07523         92 VNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG--------------IA  157 (255)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC--------------Cc
Confidence            999996422      123346778899999999999987652   3468999999754432211              24


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .|+.+|...+.+.+.++    ++|+++++++||.+.++....... ...+...+....+...+.+++|+|++
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~  228 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFSAWLEKRTPAGRWGKVEELVGA  228 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            59999997777766553    568999999999999985321100 01122222223334456677777754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-25  Score=174.68  Aligned_cols=193  Identities=17%  Similarity=0.168  Sum_probs=134.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|++.+.++..+     ...+.++++|++|.+.+.++++       ++|+|
T Consensus         9 ~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   88 (262)
T PRK13394          9 TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDIL   88 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998754322111     1247789999999998877664       38999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHh----cCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..++++..+++|+.++..+++.+.+    ..+.++||++||...+...+              ..
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~--------------~~  154 (262)
T PRK13394         89 VSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASP--------------LK  154 (262)
T ss_pred             EECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCC--------------CC
Confidence            999997422      1233556788999996665555432    22357999999975543211              11


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-ch-------hHHHHHHHHh-cCCceEEEEEEeeee
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-GN-------LVAKLVRLLF-SQHFSLVFFHCQITC  206 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~-~~-------~~~~~~~~~~-~~~~~~~~~~~~dva  206 (209)
                      +.|+.+|...+.+.+.++    +.++++++++||.++||..... ..       ........++ .+.....|++++|++
T Consensus       155 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  234 (262)
T PRK13394        155 SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVA  234 (262)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            459999998777766654    3589999999999999853110 00       0112233333 334446789999998


Q ss_pred             ec
Q 028444          207 HA  208 (209)
Q Consensus       207 ~~  208 (209)
                      ++
T Consensus       235 ~a  236 (262)
T PRK13394        235 QT  236 (262)
T ss_pred             HH
Confidence            75

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.4e-25  Score=173.45  Aligned_cols=194  Identities=19%  Similarity=0.144  Sum_probs=137.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+......     ..++.++.+|++|.+++.++++       ++|+|
T Consensus        12 ~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   91 (274)
T PRK07775         12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVL   91 (274)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999987543221110     1257888999999999877664       57999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++.+.+++|+.++.++++.+.+.+   +.++||++||...|.+...              ..
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  157 (274)
T PRK07775         92 VSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH--------------MG  157 (274)
T ss_pred             EECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC--------------cc
Confidence            999996432      112345668999999999999876431   3457999999877653211              14


Q ss_pred             hHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCC-cchhHHHHHHHH--hcCCceEEEEEEeeeeecC
Q 028444          141 QYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLT-TGNLVAKLVRLL--FSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~~----~~~~~~~~rp~~v~g~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~i  209 (209)
                      .|+.+|.+.+.+.+.+++    .|++++++|||.+.++.... .......++...  ..+.....+++++|+|+++
T Consensus       158 ~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~  233 (274)
T PRK07775        158 AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAI  233 (274)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHH
Confidence            599999999988877653    38999999999987763211 112222222221  1223345589999998763

>PRK06398 aldose dehydrogenase; Validated

Probab=99.92  E-value=1.3e-24  Score=169.93  Aligned_cols=155  Identities=19%  Similarity=0.208  Sum_probs=122.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.      ..+.++++|++|++++.++++       ++|+|||||
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A   80 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA   80 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            3699999999999999999999999999999976532      158899999999999877664       589999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++..+++++.+.+   +.+++|++||...+.+..+              +..|+.
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  146 (258)
T PRK06398         81 GIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN--------------AAAYVT  146 (258)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC--------------Cchhhh
Confidence            96321      223456779999999999999887643   3468999999876643211              245999


Q ss_pred             HHHHHHHHHHHHhhc---CCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQAASE---GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~  175 (209)
                      +|++.+.+.+.++..   +++++.++||++.+|.
T Consensus       147 sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~  180 (258)
T PRK06398        147 SKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPL  180 (258)
T ss_pred             hHHHHHHHHHHHHHHhCCCCEEEEEecCCccchH
Confidence            999888877776532   4999999999998873

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=2.2e-25  Score=173.10  Aligned_cols=194  Identities=19%  Similarity=0.127  Sum_probs=136.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+......    ..++.++++|++|++++..+++       ++|+|
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   85 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDIL   85 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            379999999999999999999999999999998754322111    1257899999999999987764       57999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||+|+....       ..+++.+.+++|+.++.++++.+.+..   +.++||++||...+.+..+.              
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------  151 (251)
T PRK07231         86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL--------------  151 (251)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc--------------
Confidence            999996321       123456789999999999999887542   34689999998776543221              


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-chhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|...+.+.+.++    +.+++++.++||.+.++..... ...............+...+.+++|+|++
T Consensus       152 ~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  225 (251)
T PRK07231        152 GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANA  225 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            459999997776666554    4489999999999988743110 00011222222333333456677777654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-24  Score=171.14  Aligned_cols=160  Identities=24%  Similarity=0.212  Sum_probs=123.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++...+...  .++.++++|++|.+++.++++       ++|+||||
T Consensus         6 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~   85 (277)
T PRK06180          6 TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNN   85 (277)
T ss_pred             EEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            699999999999999999999999999999986644322221  357889999999999877765       47999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++.+++++|+.++.++++++.+..   +.+++|++||...+.+.+              +...|+
T Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~--------------~~~~Y~  151 (277)
T PRK06180         86 AGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP--------------GIGYYC  151 (277)
T ss_pred             CCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC--------------CcchhH
Confidence            997422      112345679999999999999976532   346899999976654321              125699


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|+..+.+.+.++    +.|+++++++||+++++.
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  187 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW  187 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence            99998887766654    358999999999998863

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3e-25  Score=173.93  Aligned_cols=160  Identities=14%  Similarity=0.173  Sum_probs=123.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++...+      ..++.++++|++|++++..+++      ++|++
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~l   89 (263)
T PRK08339         10 LAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDIF   89 (263)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcEE
Confidence            58999999999999999999999999999998654322111      1358899999999998877765      48999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||...+      ..+++++.+++|+.++..+++++.+.+   +.+++|++||...+.+.+..              .
T Consensus        90 v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~--------------~  155 (263)
T PRK08339         90 FFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNI--------------A  155 (263)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcc--------------h
Confidence            999996422      234577889999999999998887643   23689999998765332221              3


Q ss_pred             hHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|...+    .+.+++.++|++++.+.||.+.++.
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR  194 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence            4999999554    4555556679999999999998873

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.1e-25  Score=174.84  Aligned_cols=160  Identities=23%  Similarity=0.155  Sum_probs=123.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+++.+..  ...+.++++|++|.+++.+++.       ++|+||||
T Consensus         5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~   84 (275)
T PRK08263          5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNN   84 (275)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999998654332111  1357888999999998877654       57999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++.+.+++|+.++..+++.+.+.   .+.+++|++||...+.+....              ..|+
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--------------~~Y~  150 (275)
T PRK08263         85 AGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMS--------------GIYH  150 (275)
T ss_pred             CCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCc--------------cHHH
Confidence            997432      22456778999999999999987432   135689999998776543221              4599


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|++.+.+.+.++    +.|+++++++||.+.++.
T Consensus       151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~  186 (275)
T PRK08263        151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW  186 (275)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence            99998776665553    468999999999998864

>PRK05865 hypothetical protein; Provisional

Probab=99.92  E-value=2.7e-24  Score=188.81  Aligned_cols=163  Identities=29%  Similarity=0.402  Sum_probs=129.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+||||+||||++++++|+++|++|++++|+....  ..  .+++++++|++|.+.+.++++++|+|||||+...+  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~~--~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--   74 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--WP--SSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--   74 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--cc--cCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc--
Confidence            8999999999999999999999999999999874321  11  26889999999999999999999999999985321  


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                           .+++|+.++.++++++++. +.++||++||..                            |..+|+++..   .+
T Consensus        75 -----~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~----------------------------K~aaE~ll~~---~g  117 (854)
T PRK05865         75 -----NDHINIDGTANVLKAMAET-GTGRIVFTSSGH----------------------------QPRVEQMLAD---CG  117 (854)
T ss_pred             -----hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH----------------------------HHHHHHHHHH---cC
Confidence                 5789999999999999987 478999999852                            6677776643   58


Q ss_pred             CCEEEEecCceecCCCCCcchhHHHHHHHH--h--cCCceEEEEEEeeeeecC
Q 028444          161 LPIVPVYPGVIYGPGKLTTGNLVAKLVRLL--F--SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       161 ~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~dva~~i  209 (209)
                      ++++++||+++|||+.   ..++..+....  .  .+.....|+|++|+|+++
T Consensus       118 l~~vILRp~~VYGP~~---~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai  167 (854)
T PRK05865        118 LEWVAVRCALIFGRNV---DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLL  167 (854)
T ss_pred             CCEEEEEeceEeCCCh---HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHH
Confidence            9999999999999963   23333322211  1  123456899999999864

>PRK05717 oxidoreductase; Validated

Probab=99.92  E-value=3.6e-25  Score=172.61  Aligned_cols=160  Identities=21%  Similarity=0.157  Sum_probs=122.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+......  ...+.++++|++|.+++.++++       ++|+||||
T Consensus        12 ~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~   91 (255)
T PRK05717         12 VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCN   91 (255)
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999887543322111  1357899999999988766543       47999999


Q ss_pred             CccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           73 AALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        73 a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ||...+        ..+++++.+++|+.++.++++++.+.+  ...++|++||...+.+...              .+.|
T Consensus        92 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~--------------~~~Y  157 (255)
T PRK05717         92 AAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD--------------TEAY  157 (255)
T ss_pred             CCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC--------------Ccch
Confidence            997532        122456789999999999999997642  2358999999766543211              1459


Q ss_pred             HHHHHHHHHHHHHHhhc---CCCEEEEecCceecCC
Q 028444          143 ERSKAVADKIALQAASE---GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       143 ~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~  175 (209)
                      +.+|++.+.+.+.+++.   ++++++++||++.++.
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~  193 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD  193 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence            99999888888776532   5999999999999874

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.92  E-value=2.5e-24  Score=163.40  Aligned_cols=194  Identities=23%  Similarity=0.295  Sum_probs=133.4

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-CcCEEEEcCccC---CC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALV---EP   78 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi~~a~~~---~~   78 (209)
                      |+|||||||||++|+.+|.+.|++|++++|++.+......     .   -+...+.+.+... ++|+|||+||..   ..
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----~---~v~~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----P---NVTLWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----c---cccccchhhhcccCCCCEEEECCCCcccccc
Confidence            6899999999999999999999999999999876543211     1   1112233344444 799999999963   32


Q ss_pred             CCCC-ccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 WLPD-PSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 ~~~~-~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                      |.++ .+...+..+..|..|.+.+.+.. +++.+|+-|...-||+......+|+.+.. +++   -+..-..-|+.+...
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g-~~F---la~lc~~WE~~a~~a  148 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG-DDF---LAQLCQDWEEEALQA  148 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCC-CCh---HHHHHHHHHHHHhhh
Confidence            4333 44578899999999999998654 34568888888889988777777763222 111   112222444444444


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHH-----hcCCceEEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLL-----FSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~dva~~i  209 (209)
                      ...|.|++++|.|.|.++.......+++ .++..     -+|++++.|+|++|++++|
T Consensus       149 ~~~gtRvvllRtGvVLs~~GGaL~~m~~-~fk~glGG~~GsGrQ~~SWIhieD~v~~I  205 (297)
T COG1090         149 QQLGTRVVLLRTGVVLSPDGGALGKMLP-LFKLGLGGKLGSGRQWFSWIHIEDLVNAI  205 (297)
T ss_pred             hhcCceEEEEEEEEEecCCCcchhhhcc-hhhhccCCccCCCCceeeeeeHHHHHHHH
Confidence            4558999999999999986432222111 22322     3688999999999999875

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.92  E-value=3e-25  Score=172.26  Aligned_cols=192  Identities=20%  Similarity=0.112  Sum_probs=136.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      |+++||||+|+||++++++|+++|++|++++|+..+...    +.. ..++.++.+|++|.+++.++++       ++|+
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            479999999999999999999999999999998543221    111 1258899999999998888775       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceee-ccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||+++....      ...++.+.++.|+.++.++++++.+.+   +.++||++||...+ .+..              .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~--------------~  152 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYP--------------G  152 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCC--------------C
Confidence            9999987432      223456789999999999999886421   35689999998665 2111              1


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|.+.+.+.+.+.    +.++++++++||+++||.......  ..+...+....+...+++++|+|++
T Consensus       153 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~  224 (251)
T PRK12826        153 LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--AQWAEAIAAAIPLGRLGEPEDIAAA  224 (251)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--hHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            2459999998887777654    348999999999999986422111  1111222222233367778887764

>PLN02253 xanthoxin dehydrogenase

Probab=99.92  E-value=5.8e-25  Score=173.68  Aligned_cols=161  Identities=20%  Similarity=0.164  Sum_probs=122.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++++||||+|+||++++++|+++|++|++++|+....+.    +....++.++++|++|.+++.++++       ++|+|
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~l   98 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIM   98 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            369999999999999999999999999999987543211    1112368899999999999887775       58999


Q ss_pred             EEcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....        ..+++.+++++|+.++.++++++.+.+   +.+++|++||....-+...              
T Consensus        99 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------  164 (280)
T PLN02253         99 VNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG--------------  164 (280)
T ss_pred             EECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--------------
Confidence            999996422        123456789999999999999887542   2357999988654221111              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.++    ++++++++++||.+.++.
T Consensus       165 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        165 PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence            1359999998877776654    458999999999998873

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.92  E-value=6.8e-25  Score=170.79  Aligned_cols=160  Identities=13%  Similarity=0.169  Sum_probs=122.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CC-CCC-CCCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-IS-GLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~-~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      +++||||+++||++++++|+++|++|++++|+... .. ... ...++.++++|++|++++.++++       ++|++||
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~   89 (251)
T PRK12481         10 VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILIN   89 (251)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            69999999999999999999999999998886421 10 111 11357889999999999887764       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||....      ..+++++++++|+.++..+++++.+.+   + ..++|++||...+.+....              ..
T Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------------~~  155 (251)
T PRK12481         90 NAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV--------------PS  155 (251)
T ss_pred             CCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC--------------cc
Confidence            9996422      224577889999999999999886542   1 3589999998776433221              34


Q ss_pred             HHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|.+.+.+.+    ++.++|++++.++||.+.++.
T Consensus       156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~  193 (251)
T PRK12481        156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDN  193 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCc
Confidence            9999996665555    445579999999999998874

>PRK09186 flagellin modification protein A; Provisional

Probab=99.92  E-value=2.1e-24  Score=168.20  Aligned_cols=171  Identities=21%  Similarity=0.158  Sum_probs=122.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhcC-------c
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFG-------C   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~-------~   66 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+..       .....+.++.+|++|++++.+++++       +
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            4799999999999999999999999999999986543211       0112467789999999998887753       7


Q ss_pred             CEEEEcCccCCC---------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccc
Q 028444           67 HVIFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        67 d~vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      |+|||||+....         ..+.+...+++|+.++..+++++.+.+   +.++||++||..++........++.... 
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~-  163 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMT-  163 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccC-
Confidence            999999974311         112355678999999999988876542   3468999999765432211111111111 


Q ss_pred             ccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                         ....|+.+|...+.+.+.++    +++++++.++||.++++.
T Consensus       164 ---~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        164 ---SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ  205 (256)
T ss_pred             ---CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence               11359999998777766544    458999999999998763

>PRK07985 oxidoreductase; Provisional

Probab=99.92  E-value=1.9e-24  Score=172.01  Aligned_cols=160  Identities=23%  Similarity=0.194  Sum_probs=122.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++.+|+...  .+.+.     ...++.++.+|++|.+++.++++       ++|
T Consensus        51 ~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         51 KALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            69999999999999999999999999998765321  11111     11257789999999988876653       579


Q ss_pred             EEEEcCccCC-------CCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           68 VIFHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ++|||||...       ...+++.+.+++|+.++..+++++.+.+. ..+||++||..++.+....              
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~--------------  196 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHL--------------  196 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCc--------------
Confidence            9999999631       12345677899999999999999987532 3589999998877543221              


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.+.+    .++|+++++++||++++|.
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~  236 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence            35999999766665554    4569999999999999985

>PRK09135 pteridine reductase; Provisional

Probab=99.92  E-value=7.6e-25  Score=169.79  Aligned_cols=191  Identities=17%  Similarity=0.152  Sum_probs=133.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCC----CC--CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL----PS--EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~----~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+ .+.+    ..  ...+.++.+|++|.+++..+++       ++|
T Consensus         8 ~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135          8 VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999986432 1111    00  1257889999999999887775       479


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +||||||....      ..+++..++++|+.++.++++++.+..  ....++++++.....+              ..+.
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~  153 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERP--------------LKGY  153 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCC--------------CCCc
Confidence            99999996322      123456789999999999999997642  1235666655322110              1123


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +.|+.+|.+.+.+++.+.+.   +++++.+||++++||....  .+..........+.+...+.+++|+|++
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~a~~  223 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN--SFDEEARQAILARTPLKRIGTPEDIAEA  223 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc--cCCHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence            56999999999999887632   6999999999999997521  1222222233333333345567787765

>PLN00016 RNA-binding protein; Provisional

Probab=99.92  E-value=5.2e-24  Score=175.04  Aligned_cols=181  Identities=20%  Similarity=0.280  Sum_probs=129.6

Q ss_pred             CEEEEE----cCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----------CCCceEEEEccCCCHHHHHHHhcCc
Q 028444            1 MKILVS----GASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----------SEGALELVYGDVTDYRSLVDACFGC   66 (209)
Q Consensus         1 m~ilIt----G~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~   66 (209)
                      |+||||    |||||||++++++|+++|++|++++|+........          ...+++++.+|+.|.+.+. ...++
T Consensus        53 ~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~~  131 (378)
T PLN00016         53 KKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAGF  131 (378)
T ss_pred             ceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCCc
Confidence            479999    99999999999999999999999999865322111          0135899999998743332 22579


Q ss_pred             CEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      |+|||+++.              +..++.++++++++. ++++|||+||..+|+.....+..|..+..      ++. +|
T Consensus       132 d~Vi~~~~~--------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg~~~~~p~~E~~~~~------p~~-sK  189 (378)
T PLN00016        132 DVVYDNNGK--------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYKKSDEPPHVEGDAVK------PKA-GH  189 (378)
T ss_pred             cEEEeCCCC--------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcCCCCCCCCCCCCcCC------Ccc-hH
Confidence            999999762              145688999999987 57899999999999865444444433221      122 78


Q ss_pred             HHHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhc---------CCceEEEEEEeeeeecC
Q 028444          147 AVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFS---------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       147 ~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~i  209 (209)
                      ..+|.++++   .+++++++||+++|||+...  .....++.....         +.....|+|++|+|+++
T Consensus       190 ~~~E~~l~~---~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai  256 (378)
T PLN00016        190 LEVEAYLQK---LGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMF  256 (378)
T ss_pred             HHHHHHHHH---cCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHH
Confidence            888887653   58999999999999997532  222223333332         33345689999999764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.92  E-value=2.9e-24  Score=167.04  Aligned_cols=190  Identities=20%  Similarity=0.138  Sum_probs=136.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..  ..  ...++.++++|++|.+++.++++       ++|+|||||
T Consensus         9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~--~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   84 (252)
T PRK08220          9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL--TQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAA   84 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh--hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            36999999999999999999999999999999761  11  12368899999999999888765       379999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      +....      ..+++.+.+++|+.++.++++++.+.+   +.+++|++||.....+..+              ...|+.
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------~~~Y~~  150 (252)
T PRK08220         85 GILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG--------------MAAYGA  150 (252)
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC--------------CchhHH
Confidence            97422      223566789999999999999986532   2358999999754432211              245999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-------chhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-------GNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       145 sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +|.+.+.+.+.++    ++++++++++||.+++|.....       .............+.+...+.+++|+|++
T Consensus       151 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  225 (252)
T PRK08220        151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANA  225 (252)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHH
Confidence            9998887776654    3689999999999999853110       01111112222333344567778888765

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.5e-25  Score=170.32  Aligned_cols=159  Identities=20%  Similarity=0.222  Sum_probs=120.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+..++...  ..++.++++|++|.+++..+++       ++|+||||
T Consensus         8 ~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   87 (249)
T PRK06500          8 TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFIN   87 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            79999999999999999999999999999997543322111  1257789999999887765543       58999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEcccee-eccCCccccCCCccccccccCChHHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~-~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      ||....      ..+++++++++|+.++.++++++.+.+ ...++|++||... |+. +              ..+.|+.
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-~--------------~~~~Y~~  152 (249)
T PRK06500         88 AGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-P--------------NSSVYAA  152 (249)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-C--------------CccHHHH
Confidence            996422      223566789999999999999998642 2357777777543 321 1              1256999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      +|.+.+.+++.++    ++++++++++||.+++|.
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~  187 (249)
T PRK06500        153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL  187 (249)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence            9998888876553    458999999999999983

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=1.9e-24  Score=168.37  Aligned_cols=161  Identities=22%  Similarity=0.179  Sum_probs=122.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+. ..    +. ...++.++++|++|++++.++++       .+|+
T Consensus         4 ~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          4 VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            599999999999999999999999999999864321 10    10 11368899999999988776654       5799


Q ss_pred             EEEcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC----C-----ccEEEEEccceeeccCCccccCCCc
Q 028444           69 IFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK----T-----VEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        69 vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~-----~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                      ||||||...+        ..+++++.+++|+.++.++++++.+.+    +     ..+||++||..++.+..+       
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  156 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN-------  156 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC-------
Confidence            9999996422        123456679999999999999886531    1     356999999776543221       


Q ss_pred             cccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                             .+.|+.+|.+.+.+.+.++    ++++++++++||.++++..
T Consensus       157 -------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~  198 (256)
T PRK12745        157 -------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT  198 (256)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence                   1459999998888777664    4689999999999998753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.2e-25  Score=171.67  Aligned_cols=192  Identities=22%  Similarity=0.175  Sum_probs=137.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~~~   78 (209)
                      +++||||+|+||+++++.|+++|++|++++|+..+.+++....++.++.+|+++.+++.++++   ++|+|||+||....
T Consensus        11 ~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~   90 (245)
T PRK07060         11 SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASL   90 (245)
T ss_pred             EEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            799999999999999999999999999999986544333222356788999999998888775   48999999996422


Q ss_pred             ------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           79 ------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        79 ------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                            ..+++++.+++|+.++.++++++.+..    ..++||++||...+.+...              ...|+.+|.+
T Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~y~~sK~a  156 (245)
T PRK07060         91 ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD--------------HLAYCASKAA  156 (245)
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC--------------CcHhHHHHHH
Confidence                  123456678899999999999887642    1258999999876643221              1459999998


Q ss_pred             HHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          149 ADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       149 ~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+.+.+.++    +.+++++.++||.++++........ ...........+...+++++|+|++
T Consensus       157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~  219 (245)
T PRK07060        157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAAIPLGRFAEVDDVAAP  219 (245)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            888777664    3489999999999999853110000 1111122222333456777777765

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.2e-24  Score=166.56  Aligned_cols=157  Identities=22%  Similarity=0.209  Sum_probs=124.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+....   .+++++++|++|++++.++++       ++|+||||||
T Consensus         6 ~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag   82 (270)
T PRK06179          6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG   82 (270)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            599999999999999999999999999999986554322   368899999999999988775       4799999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ....      ..+++.+.+++|+.++.++++++.+.   .+.++||++||...+.+.+.              ...|+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~~s  148 (270)
T PRK06179         83 VGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY--------------MALYAAS  148 (270)
T ss_pred             CCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC--------------ccHHHHH
Confidence            7422      22345678999999999999987543   23578999999766543211              1459999


Q ss_pred             HHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       146 K~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      |...+.+.+.+    .+.|+++++++||++.++.
T Consensus       149 K~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~  182 (270)
T PRK06179        149 KHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF  182 (270)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence            99777766654    3469999999999998874

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.4e-25  Score=172.10  Aligned_cols=193  Identities=20%  Similarity=0.145  Sum_probs=135.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----C---CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~---~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+....    .   ...++.++.+|++|++++.++++       ++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999999975432211    1   01357889999999998877765       68


Q ss_pred             CEEEEcCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           67 HVIFHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        67 d~vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      |+||||||...   +    ..+++.+++++|+.++..+++++.+.+   +..+|+++||..++.+.+.            
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------  155 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW------------  155 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC------------
Confidence            99999999532   1    122356788999999999999876542   2358999999876543211            


Q ss_pred             ccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                        .+.|+.+|.+.+.+.+.++    ..+++++.++||.+.++....... ............+...+++++|+|++
T Consensus       156 --~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~  228 (276)
T PRK05875        156 --FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACTPLPRVGEVEDVANL  228 (276)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCCCCCCCcCHHHHHHH
Confidence              1459999999888887765    347999999999998874321100 01111222223333345667777654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=8.5e-25  Score=170.44  Aligned_cols=193  Identities=19%  Similarity=0.165  Sum_probs=136.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+......     ..++.++.+|++|++++.++++       ++|+|
T Consensus         6 ~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   85 (258)
T PRK12429          6 VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDIL   85 (258)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998664332111     1368899999999999877765       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||+....      +.+++...+++|+.++.++++.+.+.+   +.++||++||...+.+..+              .+
T Consensus        86 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------~~  151 (258)
T PRK12429         86 VNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG--------------KA  151 (258)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC--------------cc
Confidence            999996422      122345678899999888888776532   3578999999766543221              14


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc--------chhHHHHHHH-HhcCCceEEEEEEeeeee
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--------GNLVAKLVRL-LFSQHFSLVFFHCQITCH  207 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~dva~  207 (209)
                      .|+.+|.+.+.+.+.++    +.+++++.++||.+++|.....        .......... .........+++++|+|+
T Consensus       152 ~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  231 (258)
T PRK12429        152 AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIAD  231 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHH
Confidence            59999997777766553    3589999999999999853110        0001111111 222233456889999887


Q ss_pred             c
Q 028444          208 A  208 (209)
Q Consensus       208 ~  208 (209)
                      +
T Consensus       232 ~  232 (258)
T PRK12429        232 Y  232 (258)
T ss_pred             H
Confidence            5

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.2e-24  Score=169.30  Aligned_cols=158  Identities=22%  Similarity=0.278  Sum_probs=120.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~d~vi~~a   73 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.+.. .+++++.+|++|.+++.++++        ++|+|||||
T Consensus         6 ~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~A   84 (277)
T PRK05993          6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNG   84 (277)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECC
Confidence            69999999999999999999999999999998765544333 268899999999988876653        479999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++...+++|+.++..+++.+.+.+   +.++||++||...+.+...              ...|+.
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  150 (277)
T PRK05993         85 AYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKY--------------RGAYNA  150 (277)
T ss_pred             CcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCc--------------cchHHH
Confidence            96422      112345689999999777666554432   3568999999765432211              245999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      +|++.+.+.+.+    .+.|+++++++||.+.++
T Consensus       151 sK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        151 SKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            999877766554    456999999999999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-24  Score=169.83  Aligned_cols=192  Identities=17%  Similarity=0.061  Sum_probs=134.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.....    . ..++.++.+|++|.+++.+++.       ++|+|
T Consensus        11 ~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   90 (254)
T PRK08085         11 NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVL   90 (254)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999999865432211    1 1257788999999998877664       47999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++.+.+++|+.++..+++++.+.+   +.++||++||.....+...              ..
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  156 (254)
T PRK08085         91 INNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT--------------IT  156 (254)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC--------------Cc
Confidence            999996421      224566789999999999999887642   3468999999754322111              14


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .|+.+|++.+.+.+.+    .++|++++.++||++.++....... ...+........+...+..++|++++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~va~~  227 (254)
T PRK08085        157 PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRTPAARWGDPQELIGA  227 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            5999999777766665    4468999999999999985321100 01112222223333456667777654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.91  E-value=1e-23  Score=166.96  Aligned_cols=189  Identities=29%  Similarity=0.377  Sum_probs=141.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCC------CCC-CC--------CCCceEEEEccCCC------HHH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD------ISG-LP--------SEGALELVYGDVTD------YRS   58 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~------~~~-~~--------~~~~~~~~~~Dl~~------~~~   58 (209)
                      +++|+||||||+|++++++|+.+- .+|+++.|....      +.. +.        ...+++.+.+|++.      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999998765 599999996541      111 00        11589999999994      566


Q ss_pred             HHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccC------CCcc
Q 028444           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD------ENQV  132 (209)
Q Consensus        59 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~------e~~~  132 (209)
                      +..+.+.+|.|||||+..+. ...+.+....|+.||..+++.+... +.|.+.|+||.+++........+      ++..
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~-v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~  158 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH-VFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVDFDEISPTR  158 (382)
T ss_pred             HHHHhhhcceEEecchhhcc-cCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCccccccccccc
Confidence            78888899999999997543 2445678899999999999999875 56789999999887643211111      1122


Q ss_pred             ccccccCChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCC---cchhHHHHHHHHh
Q 028444          133 HEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRLLF  191 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~~~  191 (209)
                      .....+.++|+.||..+|.++++..+.|++++++|||.+-|+...+   ...++..++....
T Consensus       159 ~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~  220 (382)
T COG3320         159 NVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLL  220 (382)
T ss_pred             cccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHH
Confidence            2233345789999999999999998889999999999999986522   2456666666544

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.9e-25  Score=171.23  Aligned_cols=162  Identities=23%  Similarity=0.237  Sum_probs=121.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..     ..++..+.+|++|++++.++++       ++|+|
T Consensus        11 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T PRK05867         11 RALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIA   90 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998654332211     1357889999999998877664       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..+++++++++|+.++..+++++.+.+    ...++|++||........+.            ..
T Consensus        91 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~------------~~  158 (253)
T PRK05867         91 VCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQ------------QV  158 (253)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCC------------Cc
Confidence            999996422      223456778999999999999886543    12479999886543111000            11


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.+.+    .++|++++.++||.+.+|.
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~  198 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL  198 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence            35999999666665554    4568999999999998875

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.91  E-value=1.1e-24  Score=169.59  Aligned_cols=194  Identities=18%  Similarity=0.193  Sum_probs=134.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHh-------cCcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDAC-------FGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~-------~~~d~   68 (209)
                      +++|||||+|+||++++++|+++|++|++++|+..+.+.+..     ..++.++++|++|.+++..++       .++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            379999999999999999999999999999998653322111     135888999999999665544       46899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||+|+....      +.+++.++++.|+.++..+++.+.+.   .+.+++|++||...+.+...              .
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~--------------~  147 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF--------------K  147 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC--------------C
Confidence            9999996432      11234567889999999999988532   23568999999766543211              1


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc--------chhHHHHHH-HHhcCCceEEEEEEeeee
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--------GNLVAKLVR-LLFSQHFSLVFFHCQITC  206 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~dva  206 (209)
                      ..|+.+|.+.+.+.+.++    +.+++++.+||+++++|.....        .......+. ....+.....+++++|+|
T Consensus       148 ~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  227 (255)
T TIGR01963       148 SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVA  227 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHH
Confidence            459999998887776654    3489999999999999842100        000011111 122233444688899988


Q ss_pred             ec
Q 028444          207 HA  208 (209)
Q Consensus       207 ~~  208 (209)
                      ++
T Consensus       228 ~~  229 (255)
T TIGR01963       228 ET  229 (255)
T ss_pred             HH
Confidence            75

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.91  E-value=9.9e-25  Score=169.40  Aligned_cols=161  Identities=20%  Similarity=0.226  Sum_probs=123.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++...+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            37999999999999999999999999999998765432211     11368899999999998887764       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||+|+....      +.+++.+.+++|+.++.++++++.+.+   +.+++|++||..++.+....              
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~--------------  149 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGE--------------  149 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCC--------------
Confidence            9999986321      122345679999999999999886432   34689999998777543221              


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.++    +.++++++++||.+++|.
T Consensus       150 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~  189 (250)
T TIGR03206       150 AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL  189 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence            459999987666665554    348999999999999883

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.91  E-value=3.4e-24  Score=166.29  Aligned_cols=160  Identities=18%  Similarity=0.209  Sum_probs=122.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-C-CCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-I-SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++|+... . +.... ..++.++.+|+++.+++..+++       ++|++||
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~   86 (248)
T TIGR01832         7 VALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVN   86 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            79999999999999999999999999999986521 1 01111 1357899999999999876653       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||...+      ..+++++++++|+.++..+++++.+.+   + .+++|++||...+.+....              ..
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------~~  152 (248)
T TIGR01832        87 NAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV--------------PS  152 (248)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC--------------ch
Confidence            9997432      123456779999999999999887542   1 3589999998777543211              34


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|.+.+.+.+.++    ++|++++.++||.+.++.
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  190 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN  190 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence            9999997777666654    458999999999999884

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3e-24  Score=164.37  Aligned_cols=156  Identities=21%  Similarity=0.161  Sum_probs=121.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc----CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~~a~~~   76 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++++......++.++++|++|.+++.++++    ++|++||||+..
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            8999999999999999999999999999999986654332222246788999999999887765    589999999841


Q ss_pred             ----CC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           77 ----EP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        77 ----~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                          .+       ..+++++.+++|+.++.++++++.+.+. ..++|++||..    ..              ....|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~--------------~~~~Y~a  142 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PP--------------AGSAEAA  142 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CC--------------CccccHH
Confidence                11       1245678899999999999999987542 35899999853    00              0145999


Q ss_pred             HHHHHHHHHHH----HhhcCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQ----AASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~  174 (209)
                      +|+..+.+.+.    +.++|++++.+.||++.+|
T Consensus       143 sKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~  176 (223)
T PRK05884        143 IKAALSNWTAGQAAVFGTRGITINAVACGRSVQP  176 (223)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence            99966655554    4456899999999999876

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9.9e-25  Score=169.46  Aligned_cols=189  Identities=20%  Similarity=0.123  Sum_probs=134.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+....+.+.     ...++.++.+|++|.+++..+++       ++|+
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            36999999999999999999999999999999754322111     11257789999999998876654       5899


Q ss_pred             EEEcCccCCC---------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           69 IFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        69 vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ||||||....         ..+++.+++++|+.++.++++++.+..   +.++||++||..+|.+               
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------  151 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---------------  151 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---------------
Confidence            9999996421         113355678999999999999988652   2468999999877642               


Q ss_pred             ccCChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          137 YFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~----~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                        .+.|+.+|++.+.+.+.+++    .+++++.++||.+.++......  ...+......+.+...+.+++|+|++
T Consensus       152 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~  223 (250)
T PRK07774        152 --SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIPLSRMGTPEDLVGM  223 (250)
T ss_pred             --ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence              14599999988888777653    4799999999999988642111  11222233333333334556666553

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=2.7e-24  Score=167.52  Aligned_cols=159  Identities=17%  Similarity=0.094  Sum_probs=119.9

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCCC---CCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI---SGLPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+  ++||++++++|+++|++|++.+|+....   +++.. ..+.++++|++|++++.++++       ++|++
T Consensus         9 ~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   87 (252)
T PRK06079          9 KIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVD-EEDLLVECDVASDESIERAFATIKERVGKIDGI   87 (252)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            59999999  7999999999999999999999873211   11111 357889999999998877653       48999


Q ss_pred             EEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||...+          ..+++++.+++|+.++..+++++.+.+. ..++|++||.....+.+.              
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~--------------  153 (252)
T PRK06079         88 VHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN--------------  153 (252)
T ss_pred             EEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc--------------
Confidence            999996421          1234667899999999999999987642 357999998654322111              


Q ss_pred             CChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|+..+.+.+    ++.++|++++.+.||.+.++.
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~  194 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLA  194 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence            1459999996655554    445578999999999999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.5e-24  Score=167.79  Aligned_cols=162  Identities=24%  Similarity=0.243  Sum_probs=123.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCC-----CCCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGL-----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|+++.|+..+. +..     ....++.++.+|++|.+++.++++       ++|
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   86 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRID   86 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCC
Confidence            3799999999999999999999999998877765421 100     011368899999999998887764       579


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|||+||....      ..+++.+.+++|+.++.++++.+.+.   .+.+++|++||...+.+...              
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~--------------  152 (249)
T PRK12825         87 ILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG--------------  152 (249)
T ss_pred             EEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC--------------
Confidence            99999996432      12345677999999999999988532   23579999999877643221              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      ...|+.+|...+.+.+.++    +.+++++++|||+++|+..
T Consensus       153 ~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~  194 (249)
T PRK12825        153 RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMK  194 (249)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcc
Confidence            2459999998877776654    3589999999999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-24  Score=168.10  Aligned_cols=160  Identities=18%  Similarity=0.192  Sum_probs=118.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCC----CCC-CCceEEEEccCCCHHHHHHHhc-----------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-----------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-----------   64 (209)
                      +++||||+|+||++++++|+++|++|++..+ +.++.+.    +.. ...+..+.+|+++.+++..+++           
T Consensus         6 ~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g   85 (252)
T PRK12747          6 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   85 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcC
Confidence            6999999999999999999999999988753 3332211    111 1246788999999877654331           


Q ss_pred             --CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccc
Q 028444           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                        ++|+||||||....      ..+++++++++|+.++..+++++.+.+ ...+||++||...+.+.++           
T Consensus        86 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  154 (252)
T PRK12747         86 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD-----------  154 (252)
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC-----------
Confidence              58999999996422      112356788999999999999988764 2358999999876543221           


Q ss_pred             cccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                         ...|+.+|++.+.+.+.    +.++|++++++.||++.+|.
T Consensus       155 ---~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~  195 (252)
T PRK12747        155 ---FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM  195 (252)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence               14599999977766554    44568999999999999984

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.8e-24  Score=167.06  Aligned_cols=161  Identities=23%  Similarity=0.290  Sum_probs=122.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.+++.+.    ....++.++++|++|.+++.++++       .+|++
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l   82 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVV   82 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4899999999999999999999999999999976543221    111268899999999999877664       37999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....       ..+++..++++|+.++.++++.+.+.+   +.++||++||...+.+.+.              .
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~--------------~  148 (257)
T PRK07024         83 IANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG--------------A  148 (257)
T ss_pred             EECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC--------------C
Confidence            999996432       113456789999999999998665432   3468999999765532211              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.+    .++++++++++||.+.+|.
T Consensus       149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  188 (257)
T PRK07024        149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM  188 (257)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence            45999999887776655    3458999999999999873

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-24  Score=168.95  Aligned_cols=160  Identities=19%  Similarity=0.183  Sum_probs=121.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCCCCC----CCC-CCceEEEEccCCCHHHHHHHhc-----------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-----------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-----------   64 (209)
                      +++||||+|+||++++++|+++|++|+++ .|+.++.+.    +.. ...+.++.+|++|.+++.++++           
T Consensus         8 ~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~   87 (254)
T PRK12746          8 VALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVG   87 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccC
Confidence            69999999999999999999999999875 565433211    111 1257889999999999877665           


Q ss_pred             --CcCEEEEcCccCCCC------CCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccc
Q 028444           65 --GCHVIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        65 --~~d~vi~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                        ++|+|||+||.....      .+.++..+++|+.++.++++.+.+.. ..+++|++||..++.+..+           
T Consensus        88 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~-----------  156 (254)
T PRK12746         88 TSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTG-----------  156 (254)
T ss_pred             CCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCC-----------
Confidence              489999999974321      12235678899999999999998753 2358999999877653221           


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                         +..|+.+|.+.+.+.+.++    +.++++++++||++++|.
T Consensus       157 ---~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  197 (254)
T PRK12746        157 ---SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI  197 (254)
T ss_pred             ---CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence               2459999998887766554    458999999999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.1e-24  Score=170.47  Aligned_cols=161  Identities=20%  Similarity=0.250  Sum_probs=124.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC-CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|++++|+..+ .+.    +.. ..++.++.+|++|.+++.++++       ++|
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD  126 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLD  126 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999987532 111    111 1257889999999998877664       579


Q ss_pred             EEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +||||||....       ..+++.+.+++|+.++.++++++.+.+ ...++|++||..+|.+....              
T Consensus       127 ~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~--------------  192 (290)
T PRK06701        127 ILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL--------------  192 (290)
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc--------------
Confidence            99999996321       123456789999999999999998753 23589999998877543221              


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.++    ++|++++.++||.++++.
T Consensus       193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~  232 (290)
T PRK06701        193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL  232 (290)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence            349999997777766654    358999999999999984

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.91  E-value=2e-24  Score=168.73  Aligned_cols=191  Identities=17%  Similarity=0.144  Sum_probs=133.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-------CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+....       ...+.++.+|++|.+++.++++       ++|
T Consensus         4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   83 (259)
T PRK12384          4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVD   83 (259)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999997654322111       1258899999999988877654       579


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||||....      ..+++.+.+++|+.++..+++++.+.+   + ..++|++||.....+..              
T Consensus        84 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~--------------  149 (259)
T PRK12384         84 LLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK--------------  149 (259)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC--------------
Confidence            99999996422      223456778999999999999886642   2 35899999864321111              


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHH-----------HHHHHHhcCCceEEEEEE
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVA-----------KLVRLLFSQHFSLVFFHC  202 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~  202 (209)
                      ....|+.+|++.+.+.+.+    .++|+++++++||.++++....  ..++           +.......+.+...++++
T Consensus       150 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (259)
T PRK12384        150 HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDY  227 (259)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhcCCChHHHHHHHHHhCcccCCCCH
Confidence            1245999999766555444    4679999999999987653211  1111           122222333444567778


Q ss_pred             eeeeec
Q 028444          203 QITCHA  208 (209)
Q Consensus       203 ~dva~~  208 (209)
                      +|++++
T Consensus       228 ~dv~~~  233 (259)
T PRK12384        228 QDVLNM  233 (259)
T ss_pred             HHHHHH
Confidence            888765

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.91  E-value=1.7e-24  Score=170.90  Aligned_cols=160  Identities=23%  Similarity=0.272  Sum_probs=122.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+..+.+.    . ..++.++++|++|.+++..+++       ++|+|
T Consensus        12 ~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   91 (278)
T PRK08277         12 VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDIL   91 (278)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999764332211    1 1257889999999988876654       68999


Q ss_pred             EEcCccCCC---------------------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCcc
Q 028444           70 FHTAALVEP---------------------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGY  125 (209)
Q Consensus        70 i~~a~~~~~---------------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~  125 (209)
                      |||||...+                     ..+++.+.+++|+.++..+++.+.+.+   +.++||++||...+.+..+.
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~  171 (278)
T PRK08277         92 INGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKV  171 (278)
T ss_pred             EECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCC
Confidence            999995321                     122456779999999998888775532   24689999998777543221


Q ss_pred             ccCCCccccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          126 IADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                                    ..|+.+|.+.+.+.+.+    .+++++++.++||++.+|.
T Consensus       172 --------------~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~  211 (278)
T PRK08277        172 --------------PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ  211 (278)
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence                          34999999777666554    3458999999999999984

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-24  Score=170.13  Aligned_cols=161  Identities=19%  Similarity=0.191  Sum_probs=122.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+..    . ...++.++++|++|++++..+++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7899999999999999999999999999999976543221    1 12367889999999988877664       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++++++|+.++.++++.+.+..   +.+++|++||..++.+...              .
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~  146 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA--------------M  146 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC--------------c
Confidence            9999997432      113455678999999999888875421   3468999999866543221              1


Q ss_pred             ChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.    .++.+.|+++++++||.+.++.
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  186 (270)
T PRK05650        147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL  186 (270)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence            45999999755554    4444468999999999999874

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.91  E-value=1.6e-24  Score=156.22  Aligned_cols=189  Identities=21%  Similarity=0.174  Sum_probs=142.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      .++||||+++||+++++.|.++|++|...++++...++    +....+...+.+|+++.+++...++       .+++++
T Consensus        16 ~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlV   95 (256)
T KOG1200|consen   16 VAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLV   95 (256)
T ss_pred             eeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEE
Confidence            47999999999999999999999999999987664433    2222356788999999888766553       589999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC-----CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||+...      ..++|+..+.+|+.+.+.+.+++.+.+     +..+||++||.-..-.+.+.              
T Consensus        96 ncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ--------------  161 (256)
T KOG1200|consen   96 NCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ--------------  161 (256)
T ss_pred             EcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc--------------
Confidence            99998533      557899999999999999999887651     22389999997654333333              


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeee
Q 028444          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCH  207 (209)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  207 (209)
                      +.|+++|.    +++..++++++++++++.+.||++-+|..   ...-+.++..+...-+...+...+|+|+
T Consensus       162 tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT---~~mp~~v~~ki~~~iPmgr~G~~EevA~  230 (256)
T KOG1200|consen  162 TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMT---EAMPPKVLDKILGMIPMGRLGEAEEVAN  230 (256)
T ss_pred             hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhh---hhcCHHHHHHHHccCCccccCCHHHHHH
Confidence            33999998    88899999999999999999999999864   2233444444444444444444444443

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.8e-24  Score=168.72  Aligned_cols=160  Identities=18%  Similarity=0.172  Sum_probs=124.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+++++..    . ..++.++.+|++|.+++.++++       ++|+|
T Consensus         8 ~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   87 (275)
T PRK05876          8 GAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVV   87 (275)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999998765433211    1 1257889999999999877764       47999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.+    ..+++|++||..++.+..+              .
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~--------------~  153 (275)
T PRK05876         88 FSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG--------------L  153 (275)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC--------------C
Confidence            999996321      223456778999999999999986532    1468999999877643221              2


Q ss_pred             ChHHHHHHH----HHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~----~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+    ++.+..++.++|+++++++||.+.++.
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  193 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL  193 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence            459999995    677777776779999999999999874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-24  Score=168.34  Aligned_cols=194  Identities=18%  Similarity=0.141  Sum_probs=135.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+...     ...++.++.+|++|++++.++++       ++|+
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            36999999999999999999999999999999765432211     11257889999999998866553       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+.+.+++++|+.++.++++++.+.    .+.++||++||...+.+..+..          .+
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~----------~~  162 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEV----------MD  162 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccc----------cC
Confidence            9999996321      12345567899999999999988654    1346899999976654322110          11


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeee
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCH  207 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  207 (209)
                      ...|+.+|.+.+.+.+.++    +++++++.++|+++.++...   ..++.+...+....+...++.++|+++
T Consensus       163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~va~  232 (259)
T PRK08213        163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR---GTLERLGEDLLAHTPLGRLGDDEDLKG  232 (259)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh---hhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            2569999998888877764    34899999999999887431   223333333333333334445555543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.5e-24  Score=168.51  Aligned_cols=161  Identities=20%  Similarity=0.161  Sum_probs=120.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|+++ .|+..+.+++.     ...++.++.+|++|++++..+++       ++|
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            379999999999999999999999998774 56544322111     11358889999999998877765       479


Q ss_pred             EEEEcCccCC--CCC----CCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVE--PWL----PDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~--~~~----~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|||+||...  +..    +++...+++|+.++.++++++.+.+   +.++||++||...+.+..+              
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------  150 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN--------------  150 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC--------------
Confidence            9999998632  211    2334568899999999999998653   2358999999765432211              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.++    +.+++++.++||++.++.
T Consensus       151 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~  191 (250)
T PRK08063        151 YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA  191 (250)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence            1459999998888877654    458999999999998874

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.6e-24  Score=165.21  Aligned_cols=158  Identities=19%  Similarity=0.162  Sum_probs=122.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.  . ...++.++++|+++.+++.++++       ++|+|||||
T Consensus         7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   83 (252)
T PRK07856          7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--V-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNA   83 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--h-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            3699999999999999999999999999999976431  1 12368899999999998877764       469999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |....      ..+++++.+++|+.++..+++++.+.+    +..+||++||...+.+..+              ...|+
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~Y~  149 (252)
T PRK07856         84 GGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG--------------TAAYG  149 (252)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC--------------CchhH
Confidence            96321      223456789999999999999887632    2358999999766543221              24599


Q ss_pred             HHHHHHHHHHHHHhh---cCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      .+|.+.+.+.+.++.   ..++++.++||.+.++.
T Consensus       150 ~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~  184 (252)
T PRK07856        150 AAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ  184 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence            999988887777653   13899999999998874

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.2e-24  Score=166.47  Aligned_cols=160  Identities=23%  Similarity=0.204  Sum_probs=123.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|++++.+...       ...++.++++|++|++++..+++       ++|
T Consensus         9 ~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   88 (260)
T PRK07063          9 VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLD   88 (260)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCc
Confidence            6999999999999999999999999999999765433211       12357889999999998877764       589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ++|||||....      ..+++.+.+++|+.++.++++++.+.+   +.+++|++||...+.+..+              
T Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  154 (260)
T PRK07063         89 VLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG--------------  154 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC--------------
Confidence            99999996321      223566789999999999999987542   2468999999765533211              


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|++.+.+.+.+    .++|++++.++||++.+|.
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~  195 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL  195 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence            135999999776666554    4568999999999998874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.91  E-value=2e-24  Score=168.83  Aligned_cols=161  Identities=20%  Similarity=0.220  Sum_probs=119.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++++.    +....++.++++|++|.+++.++++       ++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            899999999999999999999999999999998654322    1112357889999999998877663       58999


Q ss_pred             EEcCccCC--C------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCccccccc
Q 028444           70 FHTAALVE--P------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        70 i~~a~~~~--~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |||||...  +      ..+++.+.+.+|+.++..+.+.+.+.    .+.++||++||..++.+.+.             
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~-------------  147 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP-------------  147 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC-------------
Confidence            99999632  1      11234456788998888777665432    23468999999866532211             


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|...+.+.+.+    .++|++++.+.||++.+|.
T Consensus       148 -~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~  188 (259)
T PRK08340        148 -LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG  188 (259)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence             145999999666555544    4568999999999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=2.6e-24  Score=167.79  Aligned_cols=161  Identities=17%  Similarity=0.165  Sum_probs=120.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      |+++||||+|+||++++++|+++|++|+++.|+..+ .+.+.. .++.++.+|++|++++.++++       ++|+||||
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~   86 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNN   86 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            369999999999999999999999999988765432 222222 257889999999999877764       57999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++.+.+++|+.++..+++.+.+.+   +.+++|++||...++....             ....|+
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~~Y~  153 (255)
T PRK06463         87 AGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE-------------GTTFYA  153 (255)
T ss_pred             CCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC-------------CccHhH
Confidence            996421      223466789999999988877765532   2468999999876642110             114599


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|++.+.+.+.++    +++++++.++||++.++.
T Consensus       154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~  189 (255)
T PRK06463        154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM  189 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCch
Confidence            99997766665554    458999999999998763

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-24  Score=168.10  Aligned_cols=160  Identities=22%  Similarity=0.209  Sum_probs=122.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+......    ...++.++++|++|++++.++++       ++|+||
T Consensus         7 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi   86 (252)
T PRK06138          7 VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLV   86 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6999999999999999999999999999999865332111    11357899999999999887764       689999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||+....      ..+++.+.+++|+.++.++++.+.+.+   +.++||++||...+.+..+              ...
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~~~  152 (252)
T PRK06138         87 NNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG--------------RAA  152 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC--------------ccH
Confidence            99996432      223355678999999999888775421   3468999999765432211              145


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|.+.+.+.+.++    ..++++++++||+++++.
T Consensus       153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (252)
T PRK06138        153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY  190 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence            9999998877776654    348999999999999985

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.91  E-value=9.5e-24  Score=163.64  Aligned_cols=162  Identities=23%  Similarity=0.280  Sum_probs=122.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC--------CC-CCCceEEEEccCCCHHHHHHHhc-------
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------LP-SEGALELVYGDVTDYRSLVDACF-------   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~--------~~-~~~~~~~~~~Dl~~~~~~~~~~~-------   64 (209)
                      |+++||||+|+||++++++|+++|++|+++.|...+...        .. ...++.++.+|++|.+++.++++       
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFG   86 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999998764322111        00 01357899999999998877763       


Q ss_pred             CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHH-hc---CCccEEEEEccceeeccCCccccCCCcccc
Q 028444           65 GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK-ET---KTVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        65 ~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~-~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      ++|+|||+||....      ..+++.+.+++|+.++.++++++. +.   .+.+++|++||...+.+..+          
T Consensus        87 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------  156 (249)
T PRK12827         87 RLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG----------  156 (249)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC----------
Confidence            58999999997432      223456688999999999999998 21   23468999999776643221          


Q ss_pred             ccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                          ...|+.+|.+.+.+.+.++    +.+++++.++||+++++..
T Consensus       157 ----~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~  198 (249)
T PRK12827        157 ----QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA  198 (249)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence                1459999997777766654    3489999999999999854

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.2e-24  Score=163.62  Aligned_cols=160  Identities=24%  Similarity=0.258  Sum_probs=123.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhcC----cCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACFG----CHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~d~vi~~a~~~   76 (209)
                      +++||||+|+||++++++|+++|++|++++|++++++++.. ..++.++++|++|.+++.+++++    +|.+|||||..
T Consensus         3 ~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~   82 (240)
T PRK06101          3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDC   82 (240)
T ss_pred             EEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCccc
Confidence            69999999999999999999999999999998655433222 13588999999999999888764    68999999853


Q ss_pred             CC------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHH
Q 028444           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (209)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (209)
                      ..      ..+++++++++|+.++.++++++.+.+ +..++|++||.....+...              ...|+.+|+..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~asK~a~  148 (240)
T PRK06101         83 EYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR--------------AEAYGASKAAV  148 (240)
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC--------------CchhhHHHHHH
Confidence            21      112345789999999999999998753 2357999988654322111              14599999977


Q ss_pred             HHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          150 DKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       150 e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+.+.+    .++|+++++++||++++|.
T Consensus       149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~  178 (240)
T PRK06101        149 AYFARTLQLDLRPKGIEVVTVFPGFVATPL  178 (240)
T ss_pred             HHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence            7776654    4568999999999999974

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.5e-24  Score=166.16  Aligned_cols=160  Identities=19%  Similarity=0.202  Sum_probs=123.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+++..  ..++.++++|++|.+++.++++       .+|+||||
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~   87 (261)
T PRK08265          8 VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNL   87 (261)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999998654332211  1358899999999998877664       57999999


Q ss_pred             CccCC-----CCCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           73 AALVE-----PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        73 a~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ||...     ...+++.+.+++|+.++..+++++.+.+  +..++|++||...+.+..+              ...|+.+
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~Y~as  153 (261)
T PRK08265         88 ACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG--------------RWLYPAS  153 (261)
T ss_pred             CCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--------------CchhHHH
Confidence            99632     1223566789999999999999887643  2358999999765432221              1459999


Q ss_pred             HHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       146 K~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      |+..+.+.+.+    .++++++++++||++.++.
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~  187 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV  187 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence            99776666554    4458999999999998873

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.6e-24  Score=166.38  Aligned_cols=160  Identities=23%  Similarity=0.227  Sum_probs=118.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+......+..++++|++|.+++.++++       ++|+|||+||
T Consensus         9 ~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   88 (255)
T PRK06057          9 VAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAG   88 (255)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            799999999999999999999999999999976543222111123678999999999887775       5799999999


Q ss_pred             cCCCC--------CCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccce-eeccCCccccCCCccccccccCChH
Q 028444           75 LVEPW--------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFF-ALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        75 ~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~-~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ...+.        .+.+.+.+++|+.++..+++.+.+..   +..++|++||.. .++...+              ...|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~--------------~~~Y  154 (255)
T PRK06057         89 ISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS--------------QISY  154 (255)
T ss_pred             cCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC--------------Ccch
Confidence            64321        12356789999999999998876422   346899998864 3432111              1349


Q ss_pred             HHHHHHHH----HHHHHHhhcCCCEEEEecCceecCC
Q 028444          143 ERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       143 ~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+|++.+    .+..++.++++++++++||++.+|.
T Consensus       155 ~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~  191 (255)
T PRK06057        155 TASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL  191 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence            99997544    4444556678999999999999885

>PRK06196 oxidoreductase; Provisional

Probab=99.91  E-value=8.6e-24  Score=169.76  Aligned_cols=173  Identities=20%  Similarity=0.147  Sum_probs=125.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.... ..++.++++|++|.+++.++++       ++|+|||||
T Consensus        28 ~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nA  107 (315)
T PRK06196         28 TAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNA  107 (315)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECC
Confidence            69999999999999999999999999999998654332211 1247899999999998877663       589999999


Q ss_pred             ccCCC----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           74 ALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        74 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      |....    ..++++..+++|+.++..+++.+.+..   +..++|++||.......  ...++.....+..+...|+.||
T Consensus       108 g~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~--~~~~~~~~~~~~~~~~~Y~~SK  185 (315)
T PRK06196        108 GVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP--IRWDDPHFTRGYDKWLAYGQSK  185 (315)
T ss_pred             CCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC--CCccccCccCCCChHHHHHHHH
Confidence            96422    234567789999999999888776532   23689999997543211  1111111111112235699999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          147 AVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       147 ~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      .+.+.+.+.++    +.|+++++++||++++|..
T Consensus       186 ~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~  219 (315)
T PRK06196        186 TANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ  219 (315)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence            98887766654    3589999999999999843

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.6e-24  Score=165.78  Aligned_cols=159  Identities=21%  Similarity=0.250  Sum_probs=122.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.+     ..++.++.+|++|++++.++++       ++|+|
T Consensus         8 ~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (254)
T PRK07478          8 VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIA   87 (254)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998654332211     1357889999999998877764       58999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeecc-CCccccCCCcccccccc
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGS-TDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~-~~~~~~~e~~~~~~~~~  138 (209)
                      |||||...+       ..+++++.+++|+.++..+++++.+..   +.+++|++||...+.. ..+              
T Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--------------  153 (254)
T PRK07478         88 FNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPG--------------  153 (254)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCC--------------
Confidence            999996421       113456789999999999988776532   2457999999766531 111              


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      ...|+.+|++.+.+.+.+    .++|+++++++||++.++
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  193 (254)
T PRK07478        154 MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP  193 (254)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence            245999999777666554    345899999999999887

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.91  E-value=8.3e-24  Score=164.31  Aligned_cols=160  Identities=23%  Similarity=0.304  Sum_probs=123.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      |+++||||+|+||++++++|+++|++|++++|++++++.+..  ..++.++.+|++|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            899999999999999999999999999999998664433211  1258899999999998877664       6899999


Q ss_pred             cCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           72 TAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        72 ~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      +||...   +    +.+++.+++++|+.++..+++.+.+..   +.+++|++||...+.+..+              ...
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~  146 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG--------------GNV  146 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC--------------Cch
Confidence            999632   1    223456789999999988888876532   3468999999765422111              145


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                      |+.+|.+.+.+.+.++    +.++++++++||.+.|+
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~  183 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT  183 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence            9999998887776654    35899999999999865

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=5.5e-24  Score=165.06  Aligned_cols=191  Identities=16%  Similarity=0.125  Sum_probs=134.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCC----CC-CCceEEEEccCCCHHHHHHHhcC-------cCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL----PS-EGALELVYGDVTDYRSLVDACFG-------CHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~d~   68 (209)
                      +++||||+|+||++++++|+++|++|+++.++. +..++.    .. ..++.++.+|++|++++.+++++       +|+
T Consensus         8 ~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935          8 VAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998766543 221111    11 12588899999999998877754       799


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||+....      ..+++.+.+++|+.++.++++++.+..   ..+++|++||...+.+..              ++
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~  153 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF--------------GQ  153 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC--------------CC
Confidence            9999997432      124566789999999999999987642   246899999965543211              12


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeecC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  209 (209)
                      ..|+.+|.+.+.+.+.+    .+.+++++.++||.+.++......   .........+.....+.+++|+++++
T Consensus       154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~edva~~~  224 (247)
T PRK12935        154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP---EEVRQKIVAKIPKKRFGQADEIAKGV  224 (247)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc---HHHHHHHHHhCCCCCCcCHHHHHHHH
Confidence            45999999766665554    345899999999999987432211   11222223333444578888888753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3e-24  Score=167.48  Aligned_cols=192  Identities=21%  Similarity=0.151  Sum_probs=134.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC---CCCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.+.   ...++.++.+|++|.+++..++.       ++|+|||
T Consensus         4 ~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~   83 (257)
T PRK07074          4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVA   83 (257)
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6999999999999999999999999999999865432211   11368899999999999877765       4899999


Q ss_pred             cCccCCCC------CCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ++|...+.      .+++.+.+++|+.++.++++++.+.   .+.++||++||...+... +.              ..|
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~--------------~~y  148 (257)
T PRK07074         84 NAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-GH--------------PAY  148 (257)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-CC--------------ccc
Confidence            99964321      1223456789999999999988543   134689999996443211 11              249


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       143 ~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +.+|.+.+.+++.++    +++++++.++||+++++...........+........+...+++++|++++
T Consensus       149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  218 (257)
T PRK07074        149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANA  218 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            999997777666654    458999999999999985321111112333333223334567888888765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=162.81  Aligned_cols=153  Identities=21%  Similarity=0.242  Sum_probs=119.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+...    .++.++++|++|++++.++++       ++|+||||||
T Consensus        11 ~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag   86 (266)
T PRK06171         11 IIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAG   86 (266)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            69999999999999999999999999999987654322    268889999999998877664       5799999999


Q ss_pred             cCCC---------------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           75 LVEP---------------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        75 ~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ...+               ..+++++++++|+.++..+++++.+.+   +..+||++||...+.+..+            
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  154 (266)
T PRK06171         87 INIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG------------  154 (266)
T ss_pred             ccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC------------
Confidence            6321               123456689999999999999987653   2357999999866543221            


Q ss_pred             ccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCcee
Q 028444          137 YFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIY  172 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~  172 (209)
                        ...|+.+|.+.+.+.+.+    .++|+++++++||.+.
T Consensus       155 --~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        155 --QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence              145999999776666554    4568999999999986

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=160.46  Aligned_cols=154  Identities=25%  Similarity=0.254  Sum_probs=120.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc------CcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~~a~   74 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.  .    ..+++++|++|.+++.++++      ++|+|||||+
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag   77 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--F----PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG   77 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--c----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence            3799999999999999999999999999999986541  1    23578999999998877765      5899999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ...+      ..+++.+.++.|+.++.++.+++.+..   +.+++|++||...|+...               ...|+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------~~~Y~~s  142 (234)
T PRK07577         78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD---------------RTSYSAA  142 (234)
T ss_pred             CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC---------------chHHHHH
Confidence            7432      223456679999999999988876532   346899999986654211               1459999


Q ss_pred             HHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       146 K~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      |...+.+.+.+    .+.|+++++++||.+.++.
T Consensus       143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  176 (234)
T PRK07577        143 KSALVGCTRTWALELAEYGITVNAVAPGPIETEL  176 (234)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence            99777666554    4568999999999999874

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.91  E-value=2.8e-23  Score=171.54  Aligned_cols=174  Identities=26%  Similarity=0.352  Sum_probs=143.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCC----CC---CCCceEEEEccCCCHHHHHHHhcC--cCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LP---SEGALELVYGDVTDYRSLVDACFG--CHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~~---~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi   70 (209)
                      ++|+||||+|.||+++++++++.+ -++++++|++.++..    +.   ...+..++-+|+.|.+.+..++++  +|+|+
T Consensus       251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf  330 (588)
T COG1086         251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF  330 (588)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence            379999999999999999999887 578888887654321    11   124788999999999999999997  99999


Q ss_pred             EcCcc--CCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           71 HTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        71 ~~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      |+|+.  ....+.+|.+.+++|+.||.++++++.+. ++++||.+||..+..+     .            +.||++|.+
T Consensus       331 HAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~P-----t------------NvmGaTKr~  392 (588)
T COG1086         331 HAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVNP-----T------------NVMGATKRL  392 (588)
T ss_pred             EhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccCC-----c------------hHhhHHHHH
Confidence            99996  45567889999999999999999999998 5899999999755422     1            669999999


Q ss_pred             HHHHHHHHhhc----CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce
Q 028444          149 ADKIALQAASE----GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS  196 (209)
Q Consensus       149 ~e~~~~~~~~~----~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  196 (209)
                      +|.+.+.+++.    +.+.+.+|.|+|.|..    +++++-+.+++.+|.+.
T Consensus       393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr----GSViPlFk~QI~~Ggpl  440 (588)
T COG1086         393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSR----GSVIPLFKKQIAEGGPL  440 (588)
T ss_pred             HHHHHHHHhhccCCCCcEEEEEEecceecCC----CCCHHHHHHHHHcCCCc
Confidence            99999988652    4789999999999985    56778777777776543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.91  E-value=5e-24  Score=166.45  Aligned_cols=159  Identities=18%  Similarity=0.181  Sum_probs=122.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+ .+.+.+.     ...++.++++|+++.+++.++++       ++|++
T Consensus        17 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   95 (258)
T PRK06935         17 VAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDIL   95 (258)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999987 3221111     11357899999999999877765       57999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++++.+++|+.++..+++++.+.+   +.+++|++||...+.+....              .
T Consensus        96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~  161 (258)
T PRK06935         96 VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV--------------P  161 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc--------------h
Confidence            999996422      123466789999999999998886532   34689999998766433221              3


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.+    .++|++++.++||.+.++.
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  200 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN  200 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence            4999999777666555    4458999999999999874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=6.4e-24  Score=167.10  Aligned_cols=160  Identities=13%  Similarity=0.083  Sum_probs=119.1

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCCC---CCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI---SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||++  +||++++++|+++|++|++.+|+....   +++.. .....++++|++|.+++..+++       .+|+
T Consensus         9 ~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (271)
T PRK06505          9 RGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDF   88 (271)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            599999997  999999999999999999998864211   11111 1123578999999999877663       5899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +|||||....          ..+++++.+++|+.++.++++++.+.+. .+++|++||.....+.+.             
T Consensus        89 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------------  155 (271)
T PRK06505         89 VVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPN-------------  155 (271)
T ss_pred             EEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCc-------------
Confidence            9999996421          2235677899999999999998887653 258999998754322111             


Q ss_pred             cCChHHHHHHHH----HHHHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~----e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|++.    +.+..++.++|++++.+.||.+.++.
T Consensus       156 -~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~  196 (271)
T PRK06505        156 -YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA  196 (271)
T ss_pred             -cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence             14599999954    45555556679999999999998874

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.3e-24  Score=165.57  Aligned_cols=163  Identities=20%  Similarity=0.236  Sum_probs=121.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+ .+.    +.. ..++.++.+|++|++++.++++       ++|+
T Consensus        10 ~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         10 VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999987532 111    111 1257889999999998877664       4799


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++++++|+.++..+++++.+.+   +.+++|++||...+.......            .
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~------------~  157 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLL------------Q  157 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCC------------c
Confidence            9999997432      224567789999999999988876532   246899999976553321110            1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|++.+.+.+.+    .++|+++++++||++.++..
T Consensus       158 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~  198 (254)
T PRK06114        158 AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMN  198 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccc
Confidence            45999999666555544    45689999999999999853

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.6e-24  Score=166.90  Aligned_cols=162  Identities=22%  Similarity=0.270  Sum_probs=121.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC---CCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      ++++||||+|+||+.++++|+++|++|++++|+....+.+..   ..++.++.+|++|++++.++++       ++|+||
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   91 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLV   91 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            479999999999999999999999999999997654322111   1146889999999998877664       689999


Q ss_pred             EcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhc---CCc-cEEEEEccceeeccCCccccCCCccccccccC
Q 028444           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        71 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |+||...+       ..+++.+.++.|+.++.++++++.+.   .+. ++++++||.....+.+.              .
T Consensus        92 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~--------------~  157 (264)
T PRK12829         92 NNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG--------------R  157 (264)
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC--------------C
Confidence            99997522       11345678999999999999988542   123 56888887543322111              1


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|...+.+++.++    +.+++++++|||+++||..
T Consensus       158 ~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        158 TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence            359999998888777654    3489999999999999853

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.91  E-value=8.1e-24  Score=170.40  Aligned_cols=172  Identities=19%  Similarity=0.156  Sum_probs=122.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.    +. ...++.++++|++|.+++.++++       ++|+|
T Consensus         8 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~l   87 (322)
T PRK07453          8 TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDAL   87 (322)
T ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEE
Confidence            59999999999999999999999999999997654321    11 11368899999999999887764       38999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---C--ccEEEEEccceeeccCC-c---ccc--CCCc
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--VEKIIYTSSFFALGSTD-G---YIA--DENQ  131 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~~i~~ss~~~~~~~~-~---~~~--~e~~  131 (209)
                      |||||...+       ..++++..+++|+.++.++++++.+.+   +  ..+||++||...+.... +   .+.  +...
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (322)
T PRK07453         88 VCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGD  167 (322)
T ss_pred             EECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhh
Confidence            999996422       223466789999999999999887642   1  24899999976543210 0   000  0000


Q ss_pred             c---------------ccccccCChHHHHHHHHHHHHHHHhh-----cCCCEEEEecCceec
Q 028444          132 V---------------HEEKYFCTQYERSKAVADKIALQAAS-----EGLPIVPVYPGVIYG  173 (209)
Q Consensus       132 ~---------------~~~~~~~~~Y~~sK~~~e~~~~~~~~-----~~~~~~~~rp~~v~g  173 (209)
                      .               ..+..+...|+.||.+.+.+.+++++     .|+++++++||++++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  229 (322)
T PRK07453        168 LSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD  229 (322)
T ss_pred             hhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence            0               01123446799999977666555542     379999999999974

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.9e-23  Score=161.49  Aligned_cols=158  Identities=20%  Similarity=0.165  Sum_probs=121.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-------cCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.  .  ..++.++++|++|.+++.+++       .++|+|||||
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   85 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--L--PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL   85 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--c--CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4699999999999999999999999999999975432  1  126889999999998876654       3589999999


Q ss_pred             ccCC--------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           74 ALVE--------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        74 ~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |...        ...+++.+.+++|+.++.++++++.+.+   +.+++|++||...+.+..             .....|
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------------~~~~~Y  152 (260)
T PRK06523         86 GGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP-------------ESTTAY  152 (260)
T ss_pred             cccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC-------------CCcchh
Confidence            9532        1223566789999999999988776532   235899999976653211             012459


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       143 ~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+|...+.+.+.++    ++|+++++++||++.+|.
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~  189 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA  189 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence            999997776665543    468999999999999985

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-24  Score=166.37  Aligned_cols=192  Identities=18%  Similarity=0.141  Sum_probs=136.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|++++.....    . ..++.++.+|++|.+++.++++       ++|+
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46999999999999999999999999999998765332211    1 1358899999999999877763       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||+|....      ..+++...++.|+.++.++++++.+.+   +.+++|++||...+.+....              
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  153 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL--------------  153 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc--------------
Confidence            9999996432      122445678899999999999987642   23589999997665432211              


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|...+.+.+.++    +.+++++.++||.+.++.......  ...........+...+++++|+|++
T Consensus       154 ~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~  224 (250)
T PRK12939        154 GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGRALERLQVPDDVAGA  224 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            349999998888777654    358999999999998875421111  0122222333344456777777664

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-23  Score=162.15  Aligned_cols=160  Identities=25%  Similarity=0.243  Sum_probs=123.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-----------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----------~~d~v   69 (209)
                      |+++||||+|+||++++++|+++|++|++++|+..+........++.++++|++|.+++.+++.           .+|++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL   81 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence            6899999999999999999999999999999975431111111368899999999998877432           47899


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||+...+       ..+++.+.+++|+.++..+++.+.+.+   ..+++|++||...+.+..+              +
T Consensus        82 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  147 (243)
T PRK07023         82 INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG--------------W  147 (243)
T ss_pred             EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC--------------c
Confidence            999997432       123456789999999999888877643   2368999999876643221              2


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecC
Q 028444          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|.+.+.+.+.++.   .+++++.++||++.+|
T Consensus       148 ~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        148 SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            4599999999999887763   4899999999999775

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=5.8e-24  Score=164.37  Aligned_cols=162  Identities=24%  Similarity=0.235  Sum_probs=122.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      |+++||||+|+||++++++|+++|++|+++.|++.+.+...     ...++.++.+|++|++++.++++       ++|+
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            37999999999999999999999999999999865432211     11357888999999998877665       3699


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||+||....      ..+++.+.++.|+.++.++++++.+.   .+.++||++||.....+..              +.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~--------------~~  151 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP--------------GQ  151 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC--------------CC
Confidence            9999986422      11234567899999999999998643   2357999999875432211              12


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|.+.+.+.+.++    +.+++++++|||.++++..
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~  192 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMT  192 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcch
Confidence            459999997777666654    3589999999999999864

>PRK08264 short chain dehydrogenase; Validated

Probab=99.90  E-value=8.3e-23  Score=157.60  Aligned_cols=158  Identities=21%  Similarity=0.168  Sum_probs=124.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc---CcCEEEEcCcc-C
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAAL-V   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~-~   76 (209)
                      +++||||+|+||++++++|+++|+ +|++++|+.++...  ...++.++.+|++|.+++.++++   .+|+|||+||. .
T Consensus         8 ~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~   85 (238)
T PRK08264          8 VVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFR   85 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            699999999999999999999998 99999998765543  22368999999999999888776   48999999997 2


Q ss_pred             CC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      ..      ..+++.+.+++|+.++..+++++.+..   +.+++|++||...+.+..+              ...|+.+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------~~~y~~sK~  151 (238)
T PRK08264         86 TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN--------------LGTYSASKA  151 (238)
T ss_pred             CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC--------------chHhHHHHH
Confidence            11      123455678999999999999876432   3467999999776643221              145999999


Q ss_pred             HHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          148 VADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       148 ~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+.+.+.++    +.++++++++|+.+.++.
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence            8887776654    348999999999998763

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=2e-23  Score=160.80  Aligned_cols=158  Identities=22%  Similarity=0.308  Sum_probs=120.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH-HHHHHHhcCcCEEEEcCccCC--
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAALVE--   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vi~~a~~~~--   77 (209)
                      ++++||||+|+||++++++|+++|++|++++|+....  .  ..++.++.+|++++ +.+.+.+.++|+||||||...  
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~   81 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--L--SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDY   81 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--c--CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCC
Confidence            3699999999999999999999999999999875432  1  13688999999997 555555567999999999642  


Q ss_pred             -C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHH
Q 028444           78 -P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (209)
Q Consensus        78 -~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (209)
                       +    ..+++.+.+++|+.++.++++++.+..   +.++||++||...+.+..+              ...|+.+|...
T Consensus        82 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~a~  147 (235)
T PRK06550         82 KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG--------------GAAYTASKHAL  147 (235)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------CcccHHHHHHH
Confidence             1    123456789999999999999887532   2358999999766533211              13499999976


Q ss_pred             HHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          150 DKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       150 e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +.+.+.    +.++|++++.++||++.++..
T Consensus       148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~  178 (235)
T PRK06550        148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMT  178 (235)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCccCccc
Confidence            655544    445689999999999998853

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-23  Score=164.69  Aligned_cols=158  Identities=24%  Similarity=0.254  Sum_probs=121.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.+.. .++.++.+|++|.+++.++++       ++|+||||||
T Consensus         3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            69999999999999999999999999999998654433222 257889999999998877663       5899999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ....      ..+++.+.+++|+.++.++++++.+.+  +.+++|++||...+.+...              ...|+.+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK  147 (274)
T PRK05693         82 YGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF--------------AGAYCASK  147 (274)
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC--------------ccHHHHHH
Confidence            6421      223456789999999999999986542  2367999999765432211              14599999


Q ss_pred             HHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          147 AVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       147 ~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      .+.+.+.+.+    .+.|+++++++||.+.++
T Consensus       148 ~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        148 AAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            9776665544    446899999999999876

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.3e-24  Score=165.78  Aligned_cols=160  Identities=21%  Similarity=0.196  Sum_probs=122.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...     ...++.++++|++|.+++..+++       ++|+|
T Consensus         9 ~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   88 (253)
T PRK06172          9 VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYA   88 (253)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999999865432211     11358899999999998877664       46999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....       ..+++.+.+++|+.++..+++++.+.   .+.+++|++||...+.+..+.              
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~--------------  154 (253)
T PRK06172         89 FNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKM--------------  154 (253)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC--------------
Confidence            999996421       22356678999999999888876542   134689999998776543221              


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.+.++    +++++++.++||.+.++.
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~  194 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM  194 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            459999997776665553    458999999999998874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.90  E-value=6.7e-23  Score=159.58  Aligned_cols=167  Identities=25%  Similarity=0.309  Sum_probs=120.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCceEEEEccCCC-HHHHHHHh-cCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTD-YRSLVDAC-FGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~~-~~~~~~~~-~~~d~vi~~a~~~~   77 (209)
                      |+|+||||||+||++++++|+++|++|+++.|+.++..... ...+++++++|++| .+.+.+.+ .++|+|||+++...
T Consensus        18 ~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~   97 (251)
T PLN00141         18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRR   97 (251)
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCc
Confidence            58999999999999999999999999999999866533221 12368999999998 56777777 68999999998632


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                      .  .++...+++|..++.++++++++. +.++||++||..+|+...+.+..+.. .. ..+...|..+|..+|++++   
T Consensus        98 ~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~~~~~~~~~~~-~~-~~~~~~~~~~k~~~e~~l~---  169 (251)
T PLN00141         98 S--FDPFAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGAAMGQILNPAY-IF-LNLFGLTLVAKLQAEKYIR---  169 (251)
T ss_pred             C--CCCCCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCCCcccccCcch-hH-HHHHHHHHHHHHHHHHHHH---
Confidence            2  123345678999999999999877 46899999999998754322211110 00 0000113345666665543   


Q ss_pred             hcCCCEEEEecCceecCC
Q 028444          158 SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+++++++|||+++++.
T Consensus       170 ~~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        170 KSGINYTIVRPGGLTNDP  187 (251)
T ss_pred             hcCCcEEEEECCCccCCC
Confidence            458999999999999864

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.90  E-value=1.5e-23  Score=162.45  Aligned_cols=160  Identities=23%  Similarity=0.208  Sum_probs=123.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHh-------cCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDAC-------FGC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~-------~~~   66 (209)
                      +.++|||||++||.++|..|++.|.+++.+.|...+++...       ...++..+++|++|.+++.+++       .++
T Consensus        13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v   92 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRV   92 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence            36999999999999999999999999999998877655431       1125899999999999998665       479


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC---ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |++|||||....      ..++....|++|+.|+..+++++.+.++   .++||.+||..++-..+..            
T Consensus        93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~------------  160 (282)
T KOG1205|consen   93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR------------  160 (282)
T ss_pred             CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc------------
Confidence            999999997532      2234556899999999999999977642   3689999998877543322            


Q ss_pred             cCChHHHHHH----HHHHHHHHHhhcCCCEE-EEecCceecC
Q 028444          138 FCTQYERSKA----VADKIALQAASEGLPIV-PVYPGVIYGP  174 (209)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~~~~~~-~~rp~~v~g~  174 (209)
                        ..|++||+    +.|.+.+|+...+..+. ++.||+|-+.
T Consensus       161 --~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te  200 (282)
T KOG1205|consen  161 --SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE  200 (282)
T ss_pred             --cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence              24999999    55666666665553332 7999999875

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.90  E-value=8.3e-24  Score=165.65  Aligned_cols=160  Identities=23%  Similarity=0.215  Sum_probs=122.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..  ..++.++++|++|.+++..+++       ++|++|||
T Consensus         8 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   87 (263)
T PRK06200          8 VALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGN   87 (263)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            69999999999999999999999999999998654432211  1257889999999988877664       58999999


Q ss_pred             CccCCC-------CCCC----ccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           73 AALVEP-------WLPD----PSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        73 a~~~~~-------~~~~----~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||....       ..++    +++++++|+.++..+++++.+.+  ...++|++||...+.+..+.              
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  153 (263)
T PRK06200         88 AGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG--------------  153 (263)
T ss_pred             CCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC--------------
Confidence            996421       1111    55678999999999999987653  23579999998766433221              


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.++.   .+++++.+.||++.++.
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence            3499999977777666543   25999999999998874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.90  E-value=3.4e-24  Score=182.92  Aligned_cols=161  Identities=21%  Similarity=0.243  Sum_probs=125.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++.+.+  ..++..+.+|++|++++..+++       .+|+|||
T Consensus       270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  349 (520)
T PRK06484        270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVN  349 (520)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            368999999999999999999999999999997654432221  1256778999999999877664       4899999


Q ss_pred             cCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           72 TAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        72 ~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||....       ..+++++++++|+.++.++++++.+.+. ..+||++||...+.+.++              ...|+
T Consensus       350 nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  415 (520)
T PRK06484        350 NAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP--------------RNAYC  415 (520)
T ss_pred             CCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC--------------CchhH
Confidence            9996421       1234677899999999999999987642 358999999876543221              14599


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|+..+.+.+.+    .++|+++++++||++.+|.
T Consensus       416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  451 (520)
T PRK06484        416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA  451 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence            9999777665554    4558999999999999874

>PRK08589 short chain dehydrogenase; Validated

Probab=99.90  E-value=1.2e-23  Score=165.52  Aligned_cols=159  Identities=21%  Similarity=0.217  Sum_probs=121.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+ ++....    .. ..++.++++|++|.+++..+++       ++|++
T Consensus         8 ~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   86 (272)
T PRK08589          8 VAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVL   86 (272)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEE
Confidence            69999999999999999999999999999998 432211    11 1258899999999988877664       47999


Q ss_pred             EEcCccCCC---C----CCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP---W----LPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~---~----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....   .    .+.+++++++|+.++..+++++.+..  +..++|++||...+.+...              ..
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  152 (272)
T PRK08589         87 FNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY--------------RS  152 (272)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC--------------Cc
Confidence            999997421   1    12356678999999999999887653  2258999999876543221              14


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|++.+.+.+.+    .++|++++.+.||.+.++.
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  191 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL  191 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence            5999999666665554    4568999999999999874

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.7e-24  Score=165.91  Aligned_cols=161  Identities=19%  Similarity=0.168  Sum_probs=123.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+..     ..++.++.+|+++++++.++++       ++|+
T Consensus        11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999998654322111     1357889999999999877664       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||+||....      ..+++.+++++|+.++.++++++.+.+    +.+++|++||...+.+..              .
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------~  156 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR--------------G  156 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC--------------C
Confidence            9999995321      223466789999999999999997532    346899999965432211              1


Q ss_pred             CChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.+..   .+++++.++||.+.++.
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~  196 (263)
T PRK07814        157 FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSA  196 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence            24599999988888777653   25899999999998763

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.6e-24  Score=165.51  Aligned_cols=161  Identities=24%  Similarity=0.278  Sum_probs=119.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++..++.. +...    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          4 VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5999999999999999999999999888765432 1111    11 01257789999999998887765       5799


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC------ccEEEEEccceeeccCCccccCCCccccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      |||||+...+       ..+++.+++++|+.++.++++++.+.+.      ..++|++||...+.+....          
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  153 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE----------  153 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC----------
Confidence            9999997432       1124457899999999999998876421      2469999997554322110          


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                         +..|+.+|.+.+.+.+.++    +++++++++||++++||.
T Consensus       154 ---~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~  194 (248)
T PRK06123        154 ---YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI  194 (248)
T ss_pred             ---ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence               1249999998888776654    348999999999999985

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=7.1e-24  Score=167.04  Aligned_cols=160  Identities=14%  Similarity=0.114  Sum_probs=118.3

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCC---CCCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+  ++||++++++|+++|++|++.+|+..   .++.+... ..-.++++|++|.+++..+++       ++|+
T Consensus         7 ~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~iDi   86 (274)
T PRK08415          7 KGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKIDF   86 (274)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999997  79999999999999999999998742   11111111 111578999999999877663       5799


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +|||||...+          ..+++++++++|+.++..+++++.+.+. .+++|++||.....+.+.             
T Consensus        87 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~-------------  153 (274)
T PRK08415         87 IVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH-------------  153 (274)
T ss_pred             EEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc-------------
Confidence            9999996421          1234667899999999999999987653 358999998654322111             


Q ss_pred             cCChHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|++..    .+..++.++|++++.+.||++.++.
T Consensus       154 -~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (274)
T PRK08415        154 -YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLA  194 (274)
T ss_pred             -chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence             145999999555    4455555678999999999998863

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=9.4e-24  Score=165.54  Aligned_cols=160  Identities=16%  Similarity=0.113  Sum_probs=122.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|+++.|+.++.++..    . ..++.++++|++|.+++.+++.       ++|+|
T Consensus        12 ~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   91 (265)
T PRK07097         12 IALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDIL   91 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5999999999999999999999999999988765432211    1 1258889999999999888774       48999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++.+++++|+.++..+++.+.+.+   +.++||++||.....+..              ...
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~  157 (265)
T PRK07097         92 VNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE--------------TVS  157 (265)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC--------------CCc
Confidence            999997432      223456778999999999999887632   346899999964432211              124


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.+    .++|++++.++||.+.++.
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ  196 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence            5999999776666555    3458999999999999874

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.2e-24  Score=165.01  Aligned_cols=160  Identities=16%  Similarity=0.154  Sum_probs=120.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+...+     ..++.++++|++|++++.++++       ++|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            579999999999999999999999999999998654332211     1368899999999998877653       5799


Q ss_pred             EEEcCccCC--C----CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVE--P----WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||...  +    ..+++++++++|+.++.++++++.+.+    ...++|++||...+.+...              
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------  147 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG--------------  147 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC--------------
Confidence            999998531  1    223456789999999999999986531    2358999998755432211              


Q ss_pred             CChHHHHHHHHHHHHHH----Hhh-cCCCEEEEecCceecC
Q 028444          139 CTQYERSKAVADKIALQ----AAS-EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~-~~~~~~~~rp~~v~g~  174 (209)
                      ...|+.+|.+.+.+.+.    +.+ +|++++.++||.+.++
T Consensus       148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence            13499999966666554    433 5899999999999864

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-23  Score=163.78  Aligned_cols=160  Identities=18%  Similarity=0.150  Sum_probs=120.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC--CCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--PSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.......  .....+.++.+|+++.+++..+++       ++|+||||
T Consensus        17 ~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~   96 (255)
T PRK06841         17 VAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNS   96 (255)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            699999999999999999999999999999975421110  011356789999999998877664       57999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++.+.+++|+.++.++++++.+.+   +.++||++||.....+...              ...|+
T Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~  162 (255)
T PRK06841         97 AGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER--------------HVAYC  162 (255)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC--------------CchHH
Confidence            996422      123455689999999999999987642   3468999999754322211              14599


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|.+.+.+.+.+    .++|++++.++||.+.++.
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  198 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL  198 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence            9999766655554    4468999999999999874

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.90  E-value=9.9e-24  Score=162.65  Aligned_cols=159  Identities=20%  Similarity=0.219  Sum_probs=119.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+........++.++.+|++|.+++..+++       ++|++|||||
T Consensus         4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag   83 (236)
T PRK06483          4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNAS   83 (236)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCc
Confidence            799999999999999999999999999999976432111111257889999999988876653       4899999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-----ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ....      ..+++++.+++|+.++..+++.+.+.+.     ..++|++||.....+...              ...|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------~~~Y~  149 (236)
T PRK06483         84 DWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK--------------HIAYA  149 (236)
T ss_pred             cccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC--------------CccHH
Confidence            6321      2234667899999999999888876421     357999988654322111              14599


Q ss_pred             HHHHHHHHHHHHHhh---cCCCEEEEecCceecC
Q 028444          144 RSKAVADKIALQAAS---EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~  174 (209)
                      .+|+..+.+.+.+++   .++++++++||++..+
T Consensus       150 asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~  183 (236)
T PRK06483        150 ASKAALDNMTLSFAAKLAPEVKVNSIAPALILFN  183 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCCCcEEEEEccCceecC
Confidence            999988887777653   2599999999998654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=1.1e-23  Score=164.73  Aligned_cols=160  Identities=15%  Similarity=0.140  Sum_probs=117.6

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCC---CCCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||++  +||++++++|+++|++|++.+|+..   ..+++... ....++++|++|++++.++++       ++|+
T Consensus        10 ~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   89 (260)
T PRK06603         10 KGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDF   89 (260)
T ss_pred             EEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccE
Confidence            589999997  8999999999999999999888632   11112111 123457899999999877663       4899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||+....          ..+++++.+++|+.++..+++++.+.+. .+++|++||.....+.+.             
T Consensus        90 lVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------------  156 (260)
T PRK06603         90 LLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPN-------------  156 (260)
T ss_pred             EEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCc-------------
Confidence            9999996421          2235667899999999999998876542 358999998654322111             


Q ss_pred             cCChHHHHHHHHHH----HHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|+..+.    +..++.++|++++.+.||.+.++.
T Consensus       157 -~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  197 (260)
T PRK06603        157 -YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA  197 (260)
T ss_pred             -ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence             1459999995554    455555678999999999998873

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.7e-22  Score=156.34  Aligned_cols=160  Identities=18%  Similarity=0.147  Sum_probs=116.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCC-CCC----CCC--CCceEEEEccCCCHHHHHHHhc------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD-ISG----LPS--EGALELVYGDVTDYRSLVDACF------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~-~~~----~~~--~~~~~~~~~Dl~~~~~~~~~~~------~~   66 (209)
                      ++++||||+|+||++++++|+++| ++|++++|+.++ .+.    +..  ..+++++++|++|.+++.++++      ++
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i   88 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV   88 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence            479999999999999999999995 999999998764 221    111  1258899999999888655443      69


Q ss_pred             CEEEEcCccCCCCCC---Cc---cchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           67 HVIFHTAALVEPWLP---DP---SRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        67 d~vi~~a~~~~~~~~---~~---~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |++|||+|...+...   ++   .+.+++|+.++..+++.+.+.+   +.++||++||...+.+..+             
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~-------------  155 (253)
T PRK07904         89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRS-------------  155 (253)
T ss_pred             CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCC-------------
Confidence            999999997533211   11   2468999999998766554332   3478999999764322111             


Q ss_pred             cCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecC
Q 028444          138 FCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                       ...|+.||++...+    ..++.++++++++++||++.++
T Consensus       156 -~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~  195 (253)
T PRK07904        156 -NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR  195 (253)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence             13499999966544    4445566899999999999986

>PRK09242 tropinone reductase; Provisional

Probab=99.90  E-value=1.2e-23  Score=164.21  Aligned_cols=162  Identities=19%  Similarity=0.171  Sum_probs=124.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+...       ...++.++.+|+++.+++..++.       ++
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   89 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL   89 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            36999999999999999999999999999999865432211       11357889999999988766553       57


Q ss_pred             CEEEEcCccCC------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           67 HVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        67 d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |+|||+||...      ...+++.+.+++|+.++..+++++.+.+   +.+++|++||...+.+....            
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~------------  157 (257)
T PRK09242         90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG------------  157 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC------------
Confidence            99999999631      1234566789999999999999886532   34689999998766543221            


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                        ..|+.+|.+.+.+.+.+    .+.+++++.++||++.+|..
T Consensus       158 --~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~  198 (257)
T PRK09242        158 --APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT  198 (257)
T ss_pred             --cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence              44999999777766654    34589999999999998853

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.1e-23  Score=164.17  Aligned_cols=160  Identities=19%  Similarity=0.111  Sum_probs=120.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      ++++||||||+||++++++|+++|++|++++|++++++..... ..+.++.+|++|++++.++++       ++|++|||
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   85 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNN   85 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            3799999999999999999999999999999986554332111 247889999999998766553       57999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++.+++++|+.++..+++.+.+.+   +.++||++||...+.+.++              ...|+
T Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  151 (273)
T PRK07825         86 AGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG--------------MATYC  151 (273)
T ss_pred             CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC--------------CcchH
Confidence            996422      122456689999999999999886542   3468999999866543221              24599


Q ss_pred             HHHHHHHH----HHHHHhhcCCCEEEEecCceecC
Q 028444          144 RSKAVADK----IALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       144 ~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      .+|...+.    +..++.+.|+++++++||++.++
T Consensus       152 asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~  186 (273)
T PRK07825        152 ASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTE  186 (273)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcch
Confidence            99985554    44445556999999999999775

>PRK08643 acetoin reductase; Validated

Probab=99.90  E-value=2.5e-23  Score=162.27  Aligned_cols=160  Identities=23%  Similarity=0.273  Sum_probs=120.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++......     ..++.++++|++|++++.++++       ++|+|
T Consensus         4 ~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   83 (256)
T PRK08643          4 VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVV   83 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999997654322111     1357889999999998877664       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..+++++++++|+.++..+++.+.+..    ...++|++||...+.+.++              .
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  149 (256)
T PRK08643         84 VNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE--------------L  149 (256)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC--------------C
Confidence            999986421      123456689999999999888876532    2358999999765432211              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.+    .++|++++.++||++.+|.
T Consensus       150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        150 AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence            45999999766655544    4568999999999999874

>PRK12320 hypothetical protein; Provisional

Probab=99.90  E-value=2e-22  Score=173.82  Aligned_cols=169  Identities=20%  Similarity=0.270  Sum_probs=128.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |||+||||+||||++++++|+++|++|++++|.+....    ..+++++++|++|.. +.+++.++|+|||+|+....  
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~----~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~--   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL----DPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS--   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc----cCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc--
Confidence            89999999999999999999999999999998654321    136889999999985 77888899999999985311  


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                          ...++|+.++.+++++|++.+ . ++||+||.  +|...                 .|.    .+|.+...   .+
T Consensus        74 ----~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~--~G~~~-----------------~~~----~aE~ll~~---~~  121 (699)
T PRK12320         74 ----APGGVGITGLAHVANAAARAG-A-RLLFVSQA--AGRPE-----------------LYR----QAETLVST---GW  121 (699)
T ss_pred             ----chhhHHHHHHHHHHHHHHHcC-C-eEEEEECC--CCCCc-----------------ccc----HHHHHHHh---cC
Confidence                123589999999999999874 4 79999985  33210                 022    34554432   45


Q ss_pred             CCEEEEecCceecCCCCC-cchhHHHHHHHHhcCCceEEEEEEeeeeecC
Q 028444          161 LPIVPVYPGVIYGPGKLT-TGNLVAKLVRLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       161 ~~~~~~rp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  209 (209)
                      ++++++|++++|||+... ...++..++.....+ .+..++|++|+++++
T Consensus       122 ~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~-~pI~vIyVdDvv~al  170 (699)
T PRK12320        122 APSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSA-RPIRVLHLDDLVRFL  170 (699)
T ss_pred             CCEEEEeCceecCCCCcccHhHHHHHHHHHHHcC-CceEEEEHHHHHHHH
Confidence            899999999999996532 135677777665554 466789999999864

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=156.95  Aligned_cols=164  Identities=20%  Similarity=0.160  Sum_probs=123.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCC----CC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+||||++++++|+++|++|++++|+... .+.+    .. ..++.++++|++|++++.++++       ++|+
T Consensus         8 ~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806          8 TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            69999999999999999999999999999987532 1111    11 1257889999999999877664       5899


Q ss_pred             EEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      |||||+.......++...+++|+.++.++++++.+.+. ..++|++||........    .+..  +   ....|+.+|.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~--~---~~~~Y~~sK~  158 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTM--P---EYEPVARSKR  158 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCC--c---cccHHHHHHH
Confidence            99999864333445677899999999999999997642 35899999854321100    0000  0   1256999999


Q ss_pred             HHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          148 VADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       148 ~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                      +.|.+.+.++    ..++++++++|+.+.+|
T Consensus       159 a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~  189 (248)
T PRK07806        159 AGEDALRALRPELAEKGIGFVVVSGDMIEGT  189 (248)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEeCCccccCc
Confidence            9998777764    45899999999988876

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=1.7e-23  Score=164.69  Aligned_cols=159  Identities=16%  Similarity=0.130  Sum_probs=118.1

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCC---CCCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+  ++||++++++|+++|++|++.+|+..   +++++... .....+++|++|++++.++++       ++|+
T Consensus        12 ~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   91 (272)
T PRK08159         12 RGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDF   91 (272)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            59999997  89999999999999999999887632   12112111 235678999999999877663       4899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +|||||....          ..+++++.+++|+.++.++++.+.+.+. ..++|++||.....+.+.             
T Consensus        92 lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~-------------  158 (272)
T PRK08159         92 VVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPH-------------  158 (272)
T ss_pred             EEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCc-------------
Confidence            9999997421          1235677899999999999999887642 368999998654322111             


Q ss_pred             cCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecC
Q 028444          138 FCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                       ...|+.+|++...+    ..++.+++++++++.||++.++
T Consensus       159 -~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  198 (272)
T PRK08159        159 -YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL  198 (272)
T ss_pred             -chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence             14599999965544    4455567899999999999876

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=2.9e-23  Score=162.18  Aligned_cols=159  Identities=14%  Similarity=0.070  Sum_probs=118.3

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCC---CCCCCC---CCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD---ISGLPS---EGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+  ++||++++++|+++|++|++.+|+...   ++++..   ..++.++++|++|++++.++++       ++
T Consensus         9 ~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~l   88 (257)
T PRK08594          9 TYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGVI   88 (257)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCc
Confidence            68999997  899999999999999999999875322   111111   1357889999999999877663       48


Q ss_pred             CEEEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccc
Q 028444           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      |++|||||....          +.+++.+.+++|+.++..+++++.+.+. ..+||++||.....+.+.           
T Consensus        89 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-----------  157 (257)
T PRK08594         89 HGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN-----------  157 (257)
T ss_pred             cEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC-----------
Confidence            999999996421          1123456789999999999999887653 358999999754322111           


Q ss_pred             cccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecC
Q 028444          136 KYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~  174 (209)
                         ...|+.+|++.+.+.    .++.++|++++.+.||.+.++
T Consensus       158 ---~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  197 (257)
T PRK08594        158 ---YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL  197 (257)
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence               145999999665555    445556899999999999886

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.90  E-value=1.4e-23  Score=162.33  Aligned_cols=160  Identities=21%  Similarity=0.255  Sum_probs=119.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHh-------cCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDAC-------FGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|+.|++.+|+.++++....  ..++.++.+|++|.+++.+++       .++|+||||
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   87 (245)
T PRK12936          8 KALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNN   87 (245)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999888887654332211  125788999999999887765       358999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||...+      ..+++.+++++|+.++.++++++.+.   .+.++||++||...+.+.+.              ...|+
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~  153 (245)
T PRK12936         88 AGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG--------------QANYC  153 (245)
T ss_pred             CCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC--------------CcchH
Confidence            996432      22356678999999999999987643   13468999999755432211              13499


Q ss_pred             HHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|...+.+.+.    +...++++++++||++.++.
T Consensus       154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~  189 (245)
T PRK12936        154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAM  189 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCch
Confidence            999966555544    34458999999999998764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.90  E-value=1.7e-23  Score=163.23  Aligned_cols=161  Identities=19%  Similarity=0.196  Sum_probs=122.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+....+.+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus        12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            37999999999999999999999999999998755432211     11257888999999998877654       4799


Q ss_pred             EEEcCccCCC--C---CCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           69 IFHTAALVEP--W---LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        69 vi~~a~~~~~--~---~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      +|||||...+  .   .+++.+.+++|+.++.++++++.+.+   +..++|++||.....+..+              ..
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  157 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN--------------MT  157 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC--------------cc
Confidence            9999996432  1   13455668999999999999987532   2358999999765432211              24


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.++    +++++++.+.||.+.++.
T Consensus       158 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~  196 (255)
T PRK06113        158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence            59999998877776654    458999999999999875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.4e-23  Score=163.21  Aligned_cols=160  Identities=19%  Similarity=0.178  Sum_probs=118.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCCC--CCceEEEEccCCCHHHHHHHhcC--------cCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDACFG--------CHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~--------~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++..++. .+.+.+..  ..++.++++|++|++++.+++++        +|++|
T Consensus         7 ~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li   86 (253)
T PRK08642          7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVV   86 (253)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence            699999999999999999999999998876543 22111110  12678899999999988777642        89999


Q ss_pred             EcCccCC--------C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccc
Q 028444           71 HTAALVE--------P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        71 ~~a~~~~--------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      |||+...        +    +.+++.+.+++|+.++.++++++.+..   +..++|++||.....+..            
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------  154 (253)
T PRK08642         87 NNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVV------------  154 (253)
T ss_pred             ECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------
Confidence            9998521        0    112345679999999999999987532   246899999864322111            


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                        +...|+.+|.+.+.+.+.++    +++++++.++||++.++.
T Consensus       155 --~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~  196 (253)
T PRK08642        155 --PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTD  196 (253)
T ss_pred             --CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCch
Confidence              12459999998888877765    347999999999998863

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=4e-23  Score=159.87  Aligned_cols=161  Identities=27%  Similarity=0.282  Sum_probs=120.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|+++.|+..+. ..    +. ...++.++.+|+++.+++.++++       ++|
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   85 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVD   85 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999998888875421 10    11 11367889999999998877664       589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|||+|+....      ..+++.+.++.|+.++.++++++.+..   +.++||++||...+.+...              
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~--------------  151 (248)
T PRK05557         86 ILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG--------------  151 (248)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC--------------
Confidence            99999996432      112345678899999999999997642   2457999998643322211              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.++    +.++++++++||.+.++.
T Consensus       152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~  192 (248)
T PRK05557        152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDM  192 (248)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence            1459999998887766654    358999999999997764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=2e-23  Score=163.21  Aligned_cols=160  Identities=15%  Similarity=0.103  Sum_probs=118.6

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCCC---CCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI---SGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+  ++||++++++|+++|++|++++|+.+..   +++..+ ..+.++++|++|.+++.++++       ++|+
T Consensus        12 ~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~   91 (258)
T PRK07533         12 RGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRLDF   91 (258)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999998  5999999999999999999999875321   111111 235678999999998877653       5899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +|||||....          ..+++++.+++|+.++.++++.+.+.+. ..++|++||.......+              
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~--------------  157 (258)
T PRK07533         92 LLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVE--------------  157 (258)
T ss_pred             EEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCc--------------
Confidence            9999996421          1234677899999999999999887653 25799999864432111              


Q ss_pred             cCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ....|+.+|++.+.+    ..++.++|++++.+.||.+.++.
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~  199 (258)
T PRK07533        158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA  199 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence            124599999965554    44455678999999999998864

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.90  E-value=4.3e-23  Score=161.52  Aligned_cols=160  Identities=21%  Similarity=0.233  Sum_probs=121.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.+..  ...+.++++|++|.+++.++++       ++|++|||
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   86 (262)
T TIGR03325         7 VVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPN   86 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999998654433222  1257889999999888776654       57999999


Q ss_pred             CccCC---C----CC----CCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           73 AALVE---P----WL----PDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        73 a~~~~---~----~~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||...   +    ..    +++++.+++|+.++..+++++.+.+  ...++|++||...+.+..+              .
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~  152 (262)
T TIGR03325        87 AGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG--------------G  152 (262)
T ss_pred             CCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC--------------C
Confidence            99632   1    11    1356789999999999999998753  2257889888765532211              1


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.+.++..   +++++.+.||++.++.
T Consensus       153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence            34999999888777666432   3999999999999874

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.90  E-value=8.6e-24  Score=162.84  Aligned_cols=160  Identities=23%  Similarity=0.248  Sum_probs=122.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++++||||+|+||+.++++|+++|++|++++|+..+..    .+.. .+++.+.+|++|.+++.++++       ++|+|
T Consensus         8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   86 (239)
T PRK12828          8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL   86 (239)
T ss_pred             CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence            37999999999999999999999999999999765421    1111 357888999999988877664       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||+++....      ..+++.+.++.|+.++.++++++.+.   .+.+++|++||...+.+...              ..
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~  152 (239)
T PRK12828         87 VNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG--------------MG  152 (239)
T ss_pred             EECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC--------------cc
Confidence            999996421      12234566889999999999988643   24579999999887754321              14


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.++    +.+++++.++||+++++.
T Consensus       153 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        153 AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            59999997777666554    358999999999999874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=2.4e-23  Score=163.03  Aligned_cols=159  Identities=13%  Similarity=0.104  Sum_probs=116.5

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCC---CCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||++  +||++++++|+++|++|++.+|+..   ..+++.. ...+..+.+|++|++++.++++       ++|+
T Consensus         8 ~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   87 (262)
T PRK07984          8 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDG   87 (262)
T ss_pred             EEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCE
Confidence            699999985  9999999999999999999888631   1111211 1346688999999999887663       4799


Q ss_pred             EEEcCccCCC-----------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           69 IFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        69 vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      +|||||....           ..+++++.+++|+.++..+++++.+.. ...++|++||.....+.++            
T Consensus        88 linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~------------  155 (262)
T PRK07984         88 FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN------------  155 (262)
T ss_pred             EEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC------------
Confidence            9999996421           112345678999999999999887643 2257999998754322111            


Q ss_pred             ccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecC
Q 028444          137 YFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~  174 (209)
                        +..|+.+|.+.+.+.+.    +.+++++++++.||++.++
T Consensus       156 --~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~  195 (262)
T PRK07984        156 --YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL  195 (262)
T ss_pred             --cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence              14599999966555544    4456899999999999886

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=1.5e-23  Score=164.13  Aligned_cols=160  Identities=15%  Similarity=0.114  Sum_probs=116.9

Q ss_pred             EEEEEcC--CChhHHHHHHHHHhCCCeEEEEEcCCCC---CCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSD---ISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~--~G~IG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||  +++||++++++|+++|++|++.+|+...   ++++... .....+++|++|++++.++++       ++|+
T Consensus         8 ~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   87 (261)
T PRK08690          8 KILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDG   87 (261)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcE
Confidence            6999997  6799999999999999999998775321   1112111 234678999999999877763       5899


Q ss_pred             EEEcCccCCC------C-C----CCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccc
Q 028444           69 IFHTAALVEP------W-L----PDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        69 vi~~a~~~~~------~-~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      +|||||....      . .    ++++..+++|+.++..+++.+.+.+  +..++|++||...+.+.++           
T Consensus        88 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~-----------  156 (261)
T PRK08690         88 LVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN-----------  156 (261)
T ss_pred             EEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC-----------
Confidence            9999997432      1 1    1345568899999999999887643  2257999998765432211           


Q ss_pred             cccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                         ...|+.+|++.+.+.    .++.++|++++.+.||++.++.
T Consensus       157 ---~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~  197 (261)
T PRK08690        157 ---YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA  197 (261)
T ss_pred             ---cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence               144999999665554    4555679999999999999874

>PRK12743 oxidoreductase; Provisional

Probab=99.90  E-value=1.8e-23  Score=163.17  Aligned_cols=160  Identities=18%  Similarity=0.191  Sum_probs=120.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|+++.|+.. ..+...     ...++.++.+|++|.+++..+++       ++|+
T Consensus         4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998876432 221111     11358899999999988877664       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++.+++++|+.++..+++++.+.+    +.+++|++||.....+..+              
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~--------------  149 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPG--------------  149 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCC--------------
Confidence            9999996432      223456789999999999999887643    1358999999654322111              


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.+    .+++++++.++||.+++|.
T Consensus       150 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~  190 (256)
T PRK12743        150 ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM  190 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence            245999999777766554    4568999999999999974

>PRK06194 hypothetical protein; Provisional

Probab=99.89  E-value=6.5e-23  Score=162.49  Aligned_cols=159  Identities=16%  Similarity=0.118  Sum_probs=120.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++|||||+|+||++++++|+++|++|++++|+...+++..    . ..++.++.+|++|.+++.++++       ++|+|
T Consensus         8 ~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~v   87 (287)
T PRK06194          8 VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLL   87 (287)
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999754332211    1 1357889999999999888775       47999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc----CC-----ccEEEEEccceeeccCCccccCCCcccc
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KT-----VEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-----~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      |||||....      ..+++...+++|+.++.++++++.+.    ..     .+++|++||...+.+.+.          
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  157 (287)
T PRK06194         88 FNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA----------  157 (287)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC----------
Confidence            999997432      22345567999999999998886442    21     158999999877654321          


Q ss_pred             ccccCChHHHHHHHHHHHHHHHhh------cCCCEEEEecCceecC
Q 028444          135 EKYFCTQYERSKAVADKIALQAAS------EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~~~------~~~~~~~~rp~~v~g~  174 (209)
                          ...|+.+|.+.+.+.+.+..      .+++++.+.||++.++
T Consensus       158 ----~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~  199 (287)
T PRK06194        158 ----MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG  199 (287)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc
Confidence                14599999988877766542      2478889999999665

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.6e-23  Score=161.12  Aligned_cols=160  Identities=23%  Similarity=0.233  Sum_probs=122.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC---CCceEEEEccCCCHHHHHHHhc--------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF--------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~--------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+..+++..   ..++.++++|++|.+++.++++        ++|+||
T Consensus         3 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi   82 (260)
T PRK08267          3 SIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLF   82 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEE
Confidence            59999999999999999999999999999998765432211   1368899999999998877654        469999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||....      ..+++++++++|+.++.++++++.+.+   +..++|++||...+.+...              ...
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~  148 (260)
T PRK08267         83 NNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG--------------LAV  148 (260)
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC--------------chh
Confidence            99997432      123456789999999999999886532   2468999999754332211              145


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|++.+.+.+.++    ++++++++++||++.++.
T Consensus       149 Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~  186 (260)
T PRK08267        149 YSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM  186 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence            9999998777666653    458999999999998753

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=2.1e-23  Score=162.70  Aligned_cols=161  Identities=16%  Similarity=0.147  Sum_probs=122.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.+.++...     ...++.++.+|++|++++.++++       ++|+
T Consensus        12 k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47999999999999999999999999999999865332211     11258899999999998877664       4699


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++.+.+..   +.+++|++||...+.+..+              .
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~  157 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG--------------D  157 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC--------------c
Confidence            9999996422      223456789999999999998886532   3468999999765432221              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.+    .+.+++++.++||.+.++.
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  197 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET  197 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence            45999999777665554    3458999999999999985

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=3e-23  Score=162.39  Aligned_cols=160  Identities=14%  Similarity=0.119  Sum_probs=116.9

Q ss_pred             EEEEEcC--CChhHHHHHHHHHhCCCeEEEEEcCC---CCCCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT---SDISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~--~G~IG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||  +++||++++++|+++|++|++.+|..   ++++++... .....+++|++|++++.++++       ++|+
T Consensus         8 ~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (260)
T PRK06997          8 RILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGLDG   87 (260)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            6999996  67999999999999999999886542   222111111 233468899999999877763       5899


Q ss_pred             EEEcCccCCC-----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCcccccc
Q 028444           69 IFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        69 vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      +|||||....           ..+++++.+++|+.++..+++++.+.+. .+++|++||.....+.+.            
T Consensus        88 lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~------------  155 (260)
T PRK06997         88 LVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPN------------  155 (260)
T ss_pred             EEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCC------------
Confidence            9999997421           1124566799999999999999987652 357999998654321111            


Q ss_pred             ccCChHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCC
Q 028444          137 YFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                        ...|+.+|+...    .+..+++++|++++.+.||++.++.
T Consensus       156 --~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (260)
T PRK06997        156 --YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLA  196 (260)
T ss_pred             --cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccch
Confidence              145999999554    4455555678999999999998863

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.1e-23  Score=162.30  Aligned_cols=160  Identities=19%  Similarity=0.188  Sum_probs=121.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.+     ...+.++++|+++.+++.++++       ++|+|
T Consensus        10 ~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   89 (252)
T PRK07035         10 IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDIL   89 (252)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999997654322111     1247789999999998876654       48999


Q ss_pred             EEcCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||+|+...   +    ..+++++.+++|+.++..+++++.+..   +..++|++||...+.+..              +.
T Consensus        90 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~  155 (252)
T PRK07035         90 VNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGD--------------FQ  155 (252)
T ss_pred             EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCC--------------CC
Confidence            99999532   1    122355689999999999998886542   346899999875543221              12


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      +.|+.+|.+.+.+.+.++    ++|++++.+.||.+.++.
T Consensus       156 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~  195 (252)
T PRK07035        156 GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF  195 (252)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc
Confidence            459999998887776654    458999999999998863

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6e-23  Score=158.97  Aligned_cols=160  Identities=18%  Similarity=0.123  Sum_probs=121.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc----CcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF----GCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi   70 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+...      ...++.++++|++|++++.++++    .+|+||
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            47999999999999999999999999999999865432211      11368899999999998877765    469999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |+||....      +.+++.+.+++|+.++.++++++.+.+   +.+++|++||.....+...              ...
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~  147 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS--------------NYV  147 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC--------------Ccc
Confidence            99996422      122344678999999999999887642   3468999998754322111              134


Q ss_pred             HHHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      |+.+|...+.+.+.+    .+.|++++.++||.++++
T Consensus       148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~  184 (243)
T PRK07102        148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP  184 (243)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence            999999776666554    456899999999999987

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.8e-22  Score=160.38  Aligned_cols=175  Identities=18%  Similarity=0.088  Sum_probs=121.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CC---CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP---SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+...    +.   ....+.++++|++|.+++.++++       ++
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i   96 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI   96 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence            369999999999999999999999999999997543221    11   11357899999999998877664       58


Q ss_pred             CEEEEcCccCCC----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           67 HVIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        67 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |+||||||...+    ..++++..+++|+.++..+++.+.+..   +.++||++||...+.... ...++........+.
T Consensus        97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~~~~~~~~~~~~~~~  175 (306)
T PRK06197         97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-IHFDDLQWERRYNRV  175 (306)
T ss_pred             CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-CCccccCcccCCCcH
Confidence            999999996422    234567789999999777777665432   246999999976443111 111111111111233


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEE--EecCceecCCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVP--VYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~--~rp~~v~g~~~  176 (209)
                      ..|+.||.+.+.+.+.++    +.++++++  +.||++.++..
T Consensus       176 ~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        176 AAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            579999997777666654    34666655  47999998743

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.89  E-value=3.7e-23  Score=160.29  Aligned_cols=161  Identities=23%  Similarity=0.214  Sum_probs=117.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC-CCCCCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~-~~~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++..+. ..+..+    +. ....+..+.+|++|.+++.++++       ++|+
T Consensus         5 ~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (246)
T PRK12938          5 IAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV   84 (246)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999886543 221111    11 11256778999999998877664       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++++++|+.++..+++++.+.+   +.+++|++||.....+..+              .
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  150 (246)
T PRK12938         85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG--------------Q  150 (246)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC--------------C
Confidence            9999997432      224567789999999999888876532   3468999999754322111              2


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|.+.+.+.+.+    ...+++++.++||++.+|..
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~  191 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV  191 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchh
Confidence            45999999666555444    45689999999999998853

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.4e-23  Score=162.97  Aligned_cols=160  Identities=20%  Similarity=0.196  Sum_probs=119.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC---CCC-CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~---~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+.....   .+. ...++.++++|+++++++.++++       ++|+||
T Consensus         8 ~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi   87 (263)
T PRK08226          8 TALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILV   87 (263)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6999999999999999999999999999998753111   010 11357889999999998877764       579999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceee-ccCCccccCCCccccccccCC
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||....      ..+++++.+++|+.++..+++++.+..   +.+++|++||.... ....              .+.
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~  153 (263)
T PRK08226         88 NNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADP--------------GET  153 (263)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCC--------------Ccc
Confidence            99996422      122345679999999999999887532   34689999986432 1111              124


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|...+.+.+.++    +++++++.++||.+++|.
T Consensus       154 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~  192 (263)
T PRK08226        154 AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM  192 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence            59999997777666554    458999999999999873

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.9e-23  Score=162.30  Aligned_cols=161  Identities=19%  Similarity=0.271  Sum_probs=121.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++++.+     ...+.++++|++|.+++.++++       ++|+
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            369999999999999999999999999999998654332211     1257789999999998887775       6899


Q ss_pred             EEEcCccCCC--CC------CCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP--WL------PDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~--~~------~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||||....  ..      .++...+++|+.++..+++++.+.   .+.+++|++||..++....  +           
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--p-----------  187 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS--P-----------  187 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--C-----------
Confidence            9999996422  11      233567999999999999987642   2346899999976543211  0           


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      ....|+.+|++.+.+.+.+    .++++++++++||.+-++
T Consensus       188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~  228 (293)
T PRK05866        188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP  228 (293)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence            1245999999776665554    456899999999998776

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.9e-23  Score=160.10  Aligned_cols=159  Identities=25%  Similarity=0.273  Sum_probs=120.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-CcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-GCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi~~a~~   75 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+...+.     ...++.++++|++|.+++.+++. ++|+||||||.
T Consensus         4 ~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~   83 (257)
T PRK09291          4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGI   83 (257)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECCCc
Confidence            7999999999999999999999999999999754322111     11258899999999999988876 89999999996


Q ss_pred             CCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ...      +.++++..+++|+.++..+++.+.+.   .+.++||++||...+.....              ...|+.+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~--------------~~~Y~~sK  149 (257)
T PRK09291         84 GEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF--------------TGAYCASK  149 (257)
T ss_pred             CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC--------------cchhHHHH
Confidence            432      12234567889999999888766542   13468999999755432111              14599999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          147 AVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       147 ~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                      .+.+.+.+.+.    +.|+++++++||++.++
T Consensus       150 ~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~  181 (257)
T PRK09291        150 HALEAIAEAMHAELKPFGIQVATVNPGPYLTG  181 (257)
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCccccc
Confidence            98887766543    45899999999998764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.8e-23  Score=166.14  Aligned_cols=160  Identities=18%  Similarity=0.208  Sum_probs=123.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHh-------cCcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDAC-------FGCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~-------~~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++++..     ...+.++.+|++|.+++.+++       .++|++
T Consensus         9 ~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   88 (330)
T PRK06139          9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVW   88 (330)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998765432211     135778899999999988776       358999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++.+.+++|+.++.++++++.+.+   +..++|++||...+.+.+.              ..
T Consensus        89 VnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~--------------~~  154 (330)
T PRK06139         89 VNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY--------------AA  154 (330)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC--------------ch
Confidence            999996322      223456689999999999998876532   2468999999876643221              14


Q ss_pred             hHHHHHH----HHHHHHHHHhhc-CCCEEEEecCceecCC
Q 028444          141 QYERSKA----VADKIALQAASE-GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~-~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|+    +++.+..++.+. +++++.+.||.+.+|.
T Consensus       155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~  194 (330)
T PRK06139        155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG  194 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence            5999999    466666666554 8999999999999884

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.3e-23  Score=160.41  Aligned_cols=160  Identities=23%  Similarity=0.235  Sum_probs=121.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|+++.|+... .+.    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus         7 ~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937          7 VAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999888775431 111    10 11368899999999998887765       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||||....      ..+++.+++++|+.++.++++++.+.+. .+++|++||...+.+.+.              .+.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~  152 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG--------------YGP  152 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC--------------Cch
Confidence            9999996422      1234567789999999999999877542 258999998755432211              245


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|.+.+.+.+.++    ..+++++.++||++.++.
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  190 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL  190 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence            9999998887776654    358999999999998874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.89  E-value=1.6e-23  Score=163.71  Aligned_cols=160  Identities=14%  Similarity=0.120  Sum_probs=118.5

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCC------CCCCCCC-CceEEEEccCCCHHHHHHHhc-------C
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSE-GALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~------~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      +++||||+  ++||++++++|+++|++|++..|+.++      ++++... ..+.++++|++|++++.++++       +
T Consensus         8 ~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (258)
T PRK07370          8 KALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGK   87 (258)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCC
Confidence            58999986  799999999999999999988765331      1111111 246788999999999877663       5


Q ss_pred             cCEEEEcCccCC------C----CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCcccc
Q 028444           66 CHVIFHTAALVE------P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        66 ~d~vi~~a~~~~------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      +|++|||||...      +    ..+++++.+++|+.++..+++++.+.+. .++||++||.....+.+.          
T Consensus        88 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~----------  157 (258)
T PRK07370         88 LDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN----------  157 (258)
T ss_pred             CCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc----------
Confidence            899999999642      1    1234677899999999999999887542 368999999754322111          


Q ss_pred             ccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          135 EKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                          ...|+.+|++.+.+.+.    +.++|++++.+.||++.++.
T Consensus       158 ----~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~  198 (258)
T PRK07370        158 ----YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLA  198 (258)
T ss_pred             ----cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCch
Confidence                14599999966555544    44568999999999998873

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.9e-23  Score=161.19  Aligned_cols=162  Identities=27%  Similarity=0.291  Sum_probs=123.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++.+..     ..++.++.+|+++.+++.++++       ++|+
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            479999999999999999999999999999998654332211     1357899999999998887765       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC-----------CccEEEEEccceeeccCCccccCCCc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-----------TVEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                      +||||+....      ..++++.++++|+.++..+++++.+..           ...++|++||...+.+...       
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  162 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ-------  162 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC-------
Confidence            9999996322      223466789999999999999876431           1258999999866543211       


Q ss_pred             cccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                             ..+|+.+|.+.+.+.+.++    ++++++++++||++++|..
T Consensus       163 -------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~  204 (258)
T PRK06949        163 -------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN  204 (258)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence                   2459999997776665543    4589999999999999853

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.89  E-value=2.1e-22  Score=188.73  Aligned_cols=207  Identities=26%  Similarity=0.306  Sum_probs=147.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC----CeEEEEEcCCCCCCC---C------------CCCCceEEEEccCCC------
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISG---L------------PSEGALELVYGDVTD------   55 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g----~~V~~~~r~~~~~~~---~------------~~~~~~~~~~~Dl~~------   55 (209)
                      |+|+|||||||||++++++|++++    ++|+++.|+......   +            ....+++++.+|+++      
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence            479999999999999999999887    899999997532110   0            001268899999974      


Q ss_pred             HHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc-----------
Q 028444           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-----------  124 (209)
Q Consensus        56 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~-----------  124 (209)
                      .+.+..+..++|+|||+|+..... .........|+.++.++++.+.+. +.++|+|+||..+|+....           
T Consensus      1052 ~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443      1052 DEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred             HHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhhhhhhcc
Confidence            455667778899999999976432 233345568999999999999876 5679999999999864210           


Q ss_pred             -cccCCCcc--ccccccCChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCC---cchhHHHHHHHHh------c
Q 028444          125 -YIADENQV--HEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRLLF------S  192 (209)
Q Consensus       125 -~~~~e~~~--~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~~~------~  192 (209)
                       ....|...  .....+.+.|+.+|.++|.++..+.+.|++++++|||.+||+...+   ...++..+++...      .
T Consensus      1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443      1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred             CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence             01111111  1111233569999999999998877779999999999999986532   2345555554321      1


Q ss_pred             CCceEEEEEEeeeeecC
Q 028444          193 QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       193 ~~~~~~~~~~~dva~~i  209 (209)
                      ......|+++||+|+++
T Consensus      1210 ~~~~~~~~~Vddva~ai 1226 (1389)
T TIGR03443      1210 INNTVNMVPVDHVARVV 1226 (1389)
T ss_pred             CCCccccccHHHHHHHH
Confidence            22346789999998764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.89  E-value=3.1e-22  Score=168.33  Aligned_cols=162  Identities=25%  Similarity=0.259  Sum_probs=123.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------------CCCceEEEEccCCCHHHHHHHhcCcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------------SEGALELVYGDVTDYRSLVDACFGCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------------~~~~~~~~~~Dl~~~~~~~~~~~~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+..++..+.              ...+++++.+|++|.+.+.+++.++|
T Consensus        82 vVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggiD  161 (576)
T PLN03209         82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNAS  161 (576)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCCC
Confidence            5999999999999999999999999999999866532210              01258899999999999999999999


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      +||||+|.......++...+++|+.++.++++++++. +.++||++||..++...  .+  ....    .....|...|.
T Consensus       162 iVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g--~p--~~~~----~sk~~~~~~Kr  232 (576)
T PLN03209        162 VVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVG--FP--AAIL----NLFWGVLCWKR  232 (576)
T ss_pred             EEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccC--cc--ccch----hhHHHHHHHHH
Confidence            9999999653322345667899999999999999987 47899999998653111  00  0000    01134666677


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          148 VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       148 ~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|..+.   +.|+++++||||+++++.
T Consensus       233 aaE~~L~---~sGIrvTIVRPG~L~tp~  257 (576)
T PLN03209        233 KAEEALI---ASGLPYTIVRPGGMERPT  257 (576)
T ss_pred             HHHHHHH---HcCCCEEEEECCeecCCc
Confidence            6665543   469999999999998763

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-22  Score=155.20  Aligned_cols=160  Identities=19%  Similarity=0.171  Sum_probs=123.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++...+.     ...++.++.+|++|.+++..+++       ++|+|
T Consensus         8 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (241)
T PRK07454          8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVL   87 (241)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999865432211     11368899999999998877664       48999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++.+.+++|+.++.++++.+.+.+   +.+++|++||...+++..+              +.
T Consensus        88 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  153 (241)
T PRK07454         88 INNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ--------------WG  153 (241)
T ss_pred             EECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC--------------cc
Confidence            999996422      123456779999999999998875532   2468999999877654321              24


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.+    .+.++++++++||++.+|.
T Consensus       154 ~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~  192 (241)
T PRK07454        154 AYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL  192 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence            5999999888776654    3458999999999998873

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.7e-22  Score=154.74  Aligned_cols=163  Identities=20%  Similarity=0.178  Sum_probs=122.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-----CcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~vi~~a~~~   76 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.+....++.+..+|++|.+++.++++     ++|+|||+||..
T Consensus         3 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~   82 (225)
T PRK08177          3 TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGIS   82 (225)
T ss_pred             EEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCccc
Confidence            699999999999999999999999999999987654333223467888999999988877665     589999999974


Q ss_pred             CC--------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           77 EP--------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        77 ~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      .+        ..+++.+.+++|+.++.++++++.+...  ...++++||.......  .+.         .....|+.+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~--~~~---------~~~~~Y~~sK  151 (225)
T PRK08177         83 GPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVEL--PDG---------GEMPLYKASK  151 (225)
T ss_pred             CCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccccc--CCC---------CCccchHHHH
Confidence            22        1134556788999999999999876532  2478888875332111  000         0123499999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          147 AVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       147 ~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .+.+.+.+.++    +++++++.++||++.++.
T Consensus       152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            98887776654    457999999999999875

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8e-23  Score=160.00  Aligned_cols=161  Identities=22%  Similarity=0.196  Sum_probs=121.8

Q ss_pred             CEEEEEcCCC-hhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            1 MKILVSGASG-YLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         1 m~ilItG~~G-~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      ++++||||+| +||++++++|+++|++|++++|+.++++...       ...++.++++|+++++++.++++       +
T Consensus        18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   97 (262)
T PRK07831         18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGR   97 (262)
T ss_pred             CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3699999997 7999999999999999999998765433211       11257889999999988877664       5


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccc
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      +|+||||||....      ..+++.+.+++|+.++..+++++.+.+   . ..++|++||...+.+..+           
T Consensus        98 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-----------  166 (262)
T PRK07831         98 LDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG-----------  166 (262)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC-----------
Confidence            7999999996321      223466778999999999999887542   1 357999988655432211           


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                         ...|+.+|.+.+.+.+.++    +++++++.++||.+++|.
T Consensus       167 ---~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~  207 (262)
T PRK07831        167 ---QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF  207 (262)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence               2459999997777766654    468999999999999984

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.2e-22  Score=156.84  Aligned_cols=160  Identities=18%  Similarity=0.213  Sum_probs=122.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.++..     ...++.++++|+++++++.++++       ++|+|
T Consensus         9 ~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   88 (239)
T PRK07666          9 NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDIL   88 (239)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEE
Confidence            6999999999999999999999999999999865332211     11368889999999999887775       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||+||....      ..+++.+.+++|+.++.++++++.+..   +.+++|++||...+.+...              ..
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~  154 (239)
T PRK07666         89 INNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV--------------TS  154 (239)
T ss_pred             EEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC--------------Cc
Confidence            999996422      123345779999999999999887532   3468999999766543221              13


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.+    .+.++++++++||.+.++.
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~  193 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM  193 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence            4999999777666554    3458999999999999873

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.4e-23  Score=160.19  Aligned_cols=161  Identities=17%  Similarity=0.144  Sum_probs=120.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|+++.++. +..+.+.     ...++.++.+|++|.+++..+++       ++|
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD   89 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPIT   89 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999999998887643 2221110     11357889999999998877664       479


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++++++++|+.++.++++++.+.+   ..+++|+++|...+.+.+.              
T Consensus        90 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~--------------  155 (258)
T PRK09134         90 LLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD--------------  155 (258)
T ss_pred             EEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC--------------
Confidence            99999996432      223456789999999999999987653   2357888887655432211              


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~  175 (209)
                      +..|+.+|...+.+.+.+++.   +++++.++||.++++.
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~  195 (258)
T PRK09134        156 FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG  195 (258)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence            135999999888888777532   4899999999998753

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-22  Score=159.36  Aligned_cols=160  Identities=17%  Similarity=0.131  Sum_probs=121.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C---CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S---EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~---~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...    .   ..++.++.+|++|.+++.++++       ++|
T Consensus        10 ~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   89 (265)
T PRK07062         10 VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVD   89 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5999999999999999999999999999999865433211    1   1257789999999998877653       579


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++.+.+++|+.++..+++.+.+..   +.+++|++||...+.+.+..             
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  156 (265)
T PRK07062         90 MLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHM-------------  156 (265)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCc-------------
Confidence            99999996321      223566789999999999998886643   24689999998765432211             


Q ss_pred             CChHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ..|+.+|+..+    .+..++.++|++++.++||++.+|.
T Consensus       157 -~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        157 -VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             -hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence             34999999554    4445555679999999999998874

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.89  E-value=1.9e-23  Score=161.82  Aligned_cols=162  Identities=20%  Similarity=0.222  Sum_probs=118.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|+++ .|+.++..+..    . ..++..+++|++|.+++.++++       ++|+
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~   82 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAA   82 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            59999999999999999999999999875 45443221111    0 1257889999999999887765       4689


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC------CccEEEEEccceeeccCCccccCCCccccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      |||+|+....       ..+++...+++|+.++..+++++.+..      +.++||++||...+.+.++.          
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~----------  152 (247)
T PRK09730         83 LVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE----------  152 (247)
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc----------
Confidence            9999996421       112345789999999999988776542      12469999997654322110          


Q ss_pred             cccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                         ...|+.+|+..+.+.+.+    .+.+++++++|||++|||..
T Consensus       153 ---~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~  194 (247)
T PRK09730        153 ---YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH  194 (247)
T ss_pred             ---ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence               124999999877766654    34689999999999999853

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-22  Score=157.51  Aligned_cols=160  Identities=18%  Similarity=0.129  Sum_probs=124.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC---CC-CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.   +. ...++.++.+|+++.+++..+++       ++|+||
T Consensus         9 ~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   88 (258)
T PRK08628          9 VVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLV   88 (258)
T ss_pred             EEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            69999999999999999999999999999998654311   00 11368899999999999877764       589999


Q ss_pred             EcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           71 HTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        71 ~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||||....     ..+++++.+++|+.++.++++.+.+..  ..++||++||...+.+..              .+..|+
T Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------~~~~Y~  154 (258)
T PRK08628         89 NNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG--------------GTSGYA  154 (258)
T ss_pred             ECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC--------------CCchhH
Confidence            99996321     113456789999999999999887542  235899999976653221              124599


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|+..+.+.+.++    +++++++.++||.+++|.
T Consensus       155 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~  190 (258)
T PRK08628        155 AAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL  190 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence            99998888777664    358999999999999984

>PRK12742 oxidoreductase; Provisional

Probab=99.89  E-value=8.7e-23  Score=157.33  Aligned_cols=161  Identities=22%  Similarity=0.230  Sum_probs=119.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCCCCCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~~   77 (209)
                      +++||||+|+||++++++|+++|++|+++.|+. ++.+++....++.++.+|++|.+++.++++   ++|++|||||...
T Consensus         8 ~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~   87 (237)
T PRK12742          8 KVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAV   87 (237)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCC
Confidence            699999999999999999999999998887643 322222122246788999999988877664   4899999999642


Q ss_pred             C------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      .      ..+++++.+++|+.++..+++.+.+.+ ..+++|++||.......  .           .....|+.+|++.+
T Consensus        88 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--~-----------~~~~~Y~~sKaa~~  154 (237)
T PRK12742         88 FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP--V-----------AGMAAYAASKSALQ  154 (237)
T ss_pred             CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC--C-----------CCCcchHHhHHHHH
Confidence            1      223567789999999999988877653 23689999996542100  0           11245999999888


Q ss_pred             HHHHHHh----hcCCCEEEEecCceecCC
Q 028444          151 KIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       151 ~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .+.+.++    +.+++++.++||.+.++.
T Consensus       155 ~~~~~la~~~~~~gi~v~~v~Pg~~~t~~  183 (237)
T PRK12742        155 GMARGLARDFGPRGITINVVQPGPIDTDA  183 (237)
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence            7766553    458999999999999874

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1e-22  Score=160.87  Aligned_cols=159  Identities=23%  Similarity=0.188  Sum_probs=120.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHh-------cCcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDAC-------FGCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d   67 (209)
                      +++||||+|+||+++++.|+++|++|++++|+.+..+..       ....++.++.+|++|++++.. +       .++|
T Consensus         5 ~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id   83 (280)
T PRK06914          5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRID   83 (280)
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCee
Confidence            489999999999999999999999999999976543211       111368899999999988765 3       3579


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||...+      ..+++.+.+++|+.++.++++.+.+.+   +.++||++||...+.+..+              
T Consensus        84 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------  149 (280)
T PRK06914         84 LLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG--------------  149 (280)
T ss_pred             EEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC--------------
Confidence            99999996432      113455678899999999999875432   3468999998655432211              


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|...+.+.+.+    .++++++++++||.+++|.
T Consensus       150 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (280)
T PRK06914        150 LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI  190 (280)
T ss_pred             CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence            245999999887776665    3568999999999999873

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=1.8e-22  Score=156.16  Aligned_cols=160  Identities=24%  Similarity=0.238  Sum_probs=120.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCC----C-CCCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~-~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+ .+.    . ....++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999999987431 110    0 011358899999999998877664       4899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||+||....      ..+++++.++.|+.++.++++++.+.   .+.++||++||...+.+....              
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--------------  149 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQ--------------  149 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCC--------------
Confidence            9999996421      23446678999999999997766432   135689999998766433221              


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.+    .+.+++++.++||++.+|.
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  189 (245)
T PRK12824        150 TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM  189 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence            34999999666665554    3558999999999999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9e-23  Score=162.53  Aligned_cols=160  Identities=23%  Similarity=0.263  Sum_probs=123.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.+    .....+..+.+|++|.+++.++++       ++|+||
T Consensus        11 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI   90 (296)
T PRK05872         11 VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVV   90 (296)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            699999999999999999999999999999986543321    111245667799999998877653       589999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ||||....      ..+++++.+++|+.++.++++++.+.+  ..++||++||...+.+..+.              ..|
T Consensus        91 ~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~Y  156 (296)
T PRK05872         91 ANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGM--------------AAY  156 (296)
T ss_pred             ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCc--------------hHH
Confidence            99997421      223456789999999999999987643  23589999998776543221              459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+|+..+.+.+.+    .++|++++++.||++.++.
T Consensus       157 ~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  193 (296)
T PRK05872        157 CASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDL  193 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchh
Confidence            99999777666554    4568999999999998874

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-22  Score=162.84  Aligned_cols=172  Identities=20%  Similarity=0.112  Sum_probs=126.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+++||++++++|+++|++|++++|+..+.++..       ...++.++.+|++|.+++.++++       ++
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i   94 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI   94 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            36999999999999999999999999999999865432211       11258899999999999877764       48


Q ss_pred             CEEEEcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCc-cccCCCcccccccc
Q 028444           67 HVIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDG-YIADENQVHEEKYF  138 (209)
Q Consensus        67 d~vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~-~~~~e~~~~~~~~~  138 (209)
                      |++|||||....     ..++++..+++|+.++..+++.+.+.+  ...++|++||...+..... ....+.   ....+
T Consensus        95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~---~~~~~  171 (313)
T PRK05854         95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE---RSYAG  171 (313)
T ss_pred             cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc---ccCcc
Confidence            999999997432     234567789999999999999887542  2358999999765432111 111111   11123


Q ss_pred             CChHHHHHHHHHHHHHHHhh------cCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAAS------EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~------~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.||.+.+.+.+++++      .|++++++.||.+.++.
T Consensus       172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            45799999988888777652      37999999999998864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.89  E-value=5e-23  Score=161.04  Aligned_cols=160  Identities=14%  Similarity=0.104  Sum_probs=117.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCC----CC--CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LP--SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~~--~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+++||++++++|+++|++|++++|+. +.++.    +.  ...++.++.+|++|++++.++++       ++|
T Consensus        10 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         10 TLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            699999999999999999999999999887643 22211    11  11357899999999998877664       479


Q ss_pred             EEEEcCccCC--------C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcc
Q 028444           68 VIFHTAALVE--------P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        68 ~vi~~a~~~~--------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                      ++|||||...        +    ..+++.+.+++|+.++..+++.+.+.+   +.++||++||...+...+..       
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  162 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY-------  162 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc-------
Confidence            9999998531        1    112455678999999999888876643   23589999997543222111       


Q ss_pred             ccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          133 HEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                             ..|+.+|++.+.+.+.+    .++|++++.++||++.++.
T Consensus       163 -------~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~  202 (260)
T PRK08416        163 -------AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA  202 (260)
T ss_pred             -------ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence                   34999999776666554    4458999999999998874

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.7e-23  Score=157.22  Aligned_cols=159  Identities=19%  Similarity=0.191  Sum_probs=119.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~   76 (209)
                      |+++||||+|+||++++++|+++ ++|++++|+..+.+.+. ...+++++++|++|.+++..+++   ++|+|||++|..
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   82 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVA   82 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            37999999999999999999999 99999999865432211 11257899999999999988886   589999999974


Q ss_pred             CCC------CCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           77 EPW------LPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        77 ~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      ...      .+++.+.++.|+.++..+++.+.+..  ..+++|++||..++.+..+              ...|+.+|..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~--------------~~~y~~~K~a  148 (227)
T PRK08219         83 DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPG--------------WGSYAASKFA  148 (227)
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCC--------------CchHHHHHHH
Confidence            321      12345678999999777777665421  2368999999877653322              1459999998


Q ss_pred             HHHHHHHHhh--cC-CCEEEEecCceecC
Q 028444          149 ADKIALQAAS--EG-LPIVPVYPGVIYGP  174 (209)
Q Consensus       149 ~e~~~~~~~~--~~-~~~~~~rp~~v~g~  174 (209)
                      .+.+.+.++.  .+ ++++.++||.+.++
T Consensus       149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~  177 (227)
T PRK08219        149 LRALADALREEEPGNVRVTSVHPGRTDTD  177 (227)
T ss_pred             HHHHHHHHHHHhcCCceEEEEecCCccch
Confidence            8888777643  24 89999999988776

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.89  E-value=3.8e-22  Score=155.46  Aligned_cols=160  Identities=16%  Similarity=0.169  Sum_probs=121.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++++...  .+.+.. ...+.++++|++|.+++.++++       ++|++||
T Consensus        12 ~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~   91 (253)
T PRK08993         12 VAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVN   91 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            59999999999999999999999999988765321  011111 1257889999999988877764       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||....      ..+++.+.+++|+.++..+++++.+.+    ...++|++||...+.+....              ..
T Consensus        92 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~  157 (253)
T PRK08993         92 NAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV--------------PS  157 (253)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC--------------cc
Confidence            9996422      224577889999999999999887642    12579999998776543221              34


Q ss_pred             HHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|++.+.+.+.+    .++|++++.++||++.++.
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~  195 (253)
T PRK08993        158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN  195 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence            999999766655544    4568999999999999874

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.4e-23  Score=158.37  Aligned_cols=157  Identities=20%  Similarity=0.180  Sum_probs=122.7

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhcC---cCEEEEcCccC
Q 028444            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (209)
Q Consensus         4 lItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~---~d~vi~~a~~~   76 (209)
                      +||||+|+||++++++|+++|++|++++|+..+.+...    ...+++++.+|++|.+++.++++.   +|++||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            69999999999999999999999999999754432211    123688999999999999888864   79999999964


Q ss_pred             CC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      ..      ..+++.+++++|+.++.+++++.... +.++||++||..++.+..+              .+.|+.+|.+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~~~~~--------------~~~Y~~sK~a~~  145 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVRPSAS--------------GVLQGAINAALE  145 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcCCCCc--------------chHHHHHHHHHH
Confidence            22      22346678999999999999955433 3578999999877654221              245999999998


Q ss_pred             HHHHHHhhc--CCCEEEEecCceecCC
Q 028444          151 KIALQAASE--GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       151 ~~~~~~~~~--~~~~~~~rp~~v~g~~  175 (209)
                      .+.+.++.+  +++++.++||++.+|.
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~  172 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPL  172 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHH
Confidence            888877632  5899999999998764

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.2e-22  Score=157.55  Aligned_cols=161  Identities=21%  Similarity=0.228  Sum_probs=123.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+...     ...++.++.+|++|.+.+..+++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999854322110     11368889999999998877765       5899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....       ..+++.+.+++|+.++.++++.+.+..  ..+++|++||...+.+..+              .
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  147 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT--------------R  147 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC--------------c
Confidence            9999996432       112245679999999999999986532  2468999999877653221              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.+.    +.++++++++||++.++.
T Consensus       148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~  187 (263)
T PRK06181        148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI  187 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence            459999998887766543    458999999999998874

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.5e-23  Score=161.36  Aligned_cols=171  Identities=15%  Similarity=0.125  Sum_probs=120.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi   70 (209)
                      .++|||+ |+||++++++|. +|++|++++|+.++++...    . ..++.++++|++|.+++.++++      ++|+||
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li   81 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV   81 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence            5889997 799999999996 8999999999765432211    1 1257889999999999877764      589999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCC--c---c---ccCCCcc--c----c-
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTD--G---Y---IADENQV--H----E-  134 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~--~---~---~~~e~~~--~----~-  134 (209)
                      ||||... ...++.+++++|+.++.++++++.+.+. .+++|++||........  .   .   ..+....  .    + 
T Consensus        82 ~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         82 HTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             ECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            9999753 3356888999999999999999987642 24678888865543210  0   0   0000000  0    0 


Q ss_pred             -ccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          135 -EKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 -~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                       .......|+.||++.+.+.+.    +.++|++++++.||++.++.
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~  206 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL  206 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence             001235699999976655554    44568999999999999874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1e-22  Score=158.30  Aligned_cols=160  Identities=15%  Similarity=0.155  Sum_probs=120.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++..|+... ...    ... ..++.++.+|+++++++.++++       ++|+
T Consensus         8 ~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077          8 VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            79999999999999999999999999887764321 111    000 1246788999999998877654       5799


Q ss_pred             EEEcCccCCC--C----CCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           69 IFHTAALVEP--W----LPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        69 vi~~a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||||....  .    .+.+.+.+++|+.++.++++++.+.. ..++||++||..+|.+..+              .+.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~  153 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG--------------LSI  153 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC--------------chH
Confidence            9999996322  1    11235678999999999999998753 2258999999877753221              256


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQAASE---GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|+..+.+.+.++++   +++++.++||++.++.
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~  190 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL  190 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence            999999888888776532   7999999999998874

>PRK05855 short chain dehydrogenase; Validated

Probab=99.88  E-value=9.1e-23  Score=175.88  Aligned_cols=160  Identities=18%  Similarity=0.182  Sum_probs=124.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+++..     ..++.++.+|++|++++.++++       ++|+
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            479999999999999999999999999999998654332111     1357899999999999877764       4799


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++.+++++|+.++.++++++.+.+    ..++||++||..+|.+..+.             
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------------  462 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL-------------  462 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC-------------
Confidence            9999997422      224566789999999999999876542    13589999999887643221             


Q ss_pred             CChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecC
Q 028444          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~  174 (209)
                       ..|+.+|++.+.+.    .++.++|+++++++||.+.++
T Consensus       463 -~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        463 -PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence             45999999655554    444556999999999999875

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=9.2e-23  Score=158.45  Aligned_cols=189  Identities=17%  Similarity=0.148  Sum_probs=132.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||+.+++.|+++|++|++++|+..+......     ..++.++++|+++.+++.++++       ++|+|
T Consensus         7 ~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   86 (253)
T PRK08217          7 VIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGL   86 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999987643322110     1357889999999888766554       47999


Q ss_pred             EEcCccCCC---------------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCC
Q 028444           70 FHTAALVEP---------------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADEN  130 (209)
Q Consensus        70 i~~a~~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~  130 (209)
                      ||+||....               ..+++..++++|+.++..+++.+.+..    ...++|++||...|+..        
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~--------  158 (253)
T PRK08217         87 INNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM--------  158 (253)
T ss_pred             EECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC--------
Confidence            999996321               112345678899999998887665432    23469999987655421        


Q ss_pred             ccccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeee
Q 028444          131 QVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITC  206 (209)
Q Consensus       131 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  206 (209)
                             ....|+.+|++.+.+.+.++    +++++++.++||.+.++....   ..+.....+....+...+.+++|+|
T Consensus       159 -------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a  228 (253)
T PRK08217        159 -------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA---MKPEALERLEKMIPVGRLGEPEEIA  228 (253)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc---cCHHHHHHHHhcCCcCCCcCHHHHH
Confidence                   12459999998887766654    458999999999999875421   1223333333333444456677766


Q ss_pred             ec
Q 028444          207 HA  208 (209)
Q Consensus       207 ~~  208 (209)
                      ++
T Consensus       229 ~~  230 (253)
T PRK08217        229 HT  230 (253)
T ss_pred             HH
Confidence            54

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2e-22  Score=158.58  Aligned_cols=161  Identities=19%  Similarity=0.188  Sum_probs=119.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C--CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S--EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.+..+...    .  .....++++|++|++++.+++.       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            68999999999999999999999999999998764322211    1  1124567899999988766553       479


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||||....      ..++++..+++|+.++.++++++.+.+    ..++||++||...+.+.+.             
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~-------------  147 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW-------------  147 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC-------------
Confidence            99999996321      223456789999999999999986532    2358999999755432211             


Q ss_pred             cCChHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|...+    .+..++.++++++++++||.+.+|.
T Consensus       148 -~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~  188 (272)
T PRK07832        148 -HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL  188 (272)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence             145999998444    4444555678999999999999874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.2e-22  Score=157.17  Aligned_cols=160  Identities=21%  Similarity=0.215  Sum_probs=119.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|+++ .|+..+...+.     ...++.++.+|++|++++.++++       ++|+
T Consensus         7 ~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (247)
T PRK05565          7 VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDI   86 (247)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            69999999999999999999999999998 78654332111     11258899999999998877665       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||++|....      ..+++++.+++|+.++.++++.+.+..   +.+++|++||...+.+...              .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------~  152 (247)
T PRK05565         87 LVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC--------------E  152 (247)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC--------------c
Confidence            9999997421      123456789999999999999887542   2457999999765533211              1


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.    +.+.|++++.++||++.++.
T Consensus       153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~  192 (247)
T PRK05565        153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM  192 (247)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence            3499999865555444    34568999999999998764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.88  E-value=7.4e-22  Score=172.99  Aligned_cols=161  Identities=17%  Similarity=0.233  Sum_probs=117.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      ||||||||+||||++|+++|.++|++|...                   .+|++|.+.+...+.  ++|+|||||+....
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~  441 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------KGRLEDRSSLLADIRNVKPTHVFNAAGVTGR  441 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------ccccccHHHHHHHHHhhCCCEEEECCcccCC
Confidence            799999999999999999999999987311                   136888888887776  68999999997532


Q ss_pred             -----CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC------ccccCCCccccccccCChHHHHHH
Q 028444           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD------GYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~------~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                           ++.++...+++|+.++.+|+++|++.+ . ++|++||..+|+...      ..+..|+..+  .++.+.|+.+|.
T Consensus       442 ~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~--~~~~~~Yg~sK~  517 (668)
T PLN02260        442 PNVDWCESHKVETIRANVVGTLTLADVCRENG-L-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKP--NFTGSFYSKTKA  517 (668)
T ss_pred             CCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-C-eEEEEcccceecCCcccccccCCCCCcCCCC--CCCCChhhHHHH
Confidence                 234678899999999999999999884 4 567788888876321      2234443321  122367999999


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHH
Q 028444          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVR  188 (209)
Q Consensus       148 ~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~  188 (209)
                      ++|.+++.+.    +..++|+.++|+.+.....+++..+++
T Consensus       518 ~~E~~~~~~~----~~~~~r~~~~~~~~~~~~~nfv~~~~~  554 (668)
T PLN02260        518 MVEELLREYD----NVCTLRVRMPISSDLSNPRNFITKISR  554 (668)
T ss_pred             HHHHHHHhhh----hheEEEEEEecccCCCCccHHHHHHhc
Confidence            9999998763    367778888887543222455555443

>PRK07069 short chain dehydrogenase; Validated

Probab=99.88  E-value=1.1e-22  Score=158.05  Aligned_cols=161  Identities=23%  Similarity=0.231  Sum_probs=116.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC-CCCCCCCC----C---CCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLP----S---EGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~----~---~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||+++++.|+++|++|++++|+ .+.++.+.    .   ...+..+++|++|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999997 33322111    1   1124467899999998876653       57


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |+||||||....      ..+++.+++++|+.++..+++.+.+.+   +.++||++||...+.+....            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~------------  148 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY------------  148 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC------------
Confidence            999999996432      122456678899996666655554432   34689999998776543222            


Q ss_pred             cCChHHHHHHHHHHHHHHHh----hc--CCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIALQAA----SE--GLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~----~~--~~~~~~~rp~~v~g~~~  176 (209)
                        ..|+.+|...+.+.+.++    ++  +++++.++||++.+|..
T Consensus       149 --~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~  191 (251)
T PRK07069        149 --TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIV  191 (251)
T ss_pred             --chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcch
Confidence              349999997777766553    33  48899999999999853

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.2e-22  Score=153.60  Aligned_cols=160  Identities=21%  Similarity=0.227  Sum_probs=120.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|++++.+.+.       ...++.++++|++|.+++.++++       ++|
T Consensus         4 ~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (248)
T PRK08251          4 KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLD   83 (248)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999999999999999865432211       12368889999999988876654       589


Q ss_pred             EEEEcCccCCCC------CCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ++|||||.....      .+.+.+.+++|+.++.++++++.+.   .+.++||++||.....+.+.             +
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------~  150 (248)
T PRK08251         84 RVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG-------------V  150 (248)
T ss_pred             EEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC-------------C
Confidence            999999974321      1234567899999999999988643   13568999999755432211             1


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                      ...|+.+|++.+.+.+.+.    ..++++++++||++.++
T Consensus       151 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~  190 (248)
T PRK08251        151 KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSE  190 (248)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcch
Confidence            1459999998777666554    34799999999999886

>PRK05599 hypothetical protein; Provisional

Probab=99.88  E-value=4.1e-22  Score=154.70  Aligned_cols=159  Identities=16%  Similarity=0.201  Sum_probs=116.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CC--CceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SE--GALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+++||++++++|. +|++|++++|+.++++++.    ..  ..+.++++|++|.+++.++++       ++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            789999999999999999998 5999999999876543321    11  247789999999998877653       589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ++|||||....      ...+..+.+++|+.++..+++.+.+.+    ..+++|++||...+.+..+             
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-------------  146 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA-------------  146 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC-------------
Confidence            99999997432      112234567889999988777664322    1368999999765432211             


Q ss_pred             cCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecC
Q 028444          138 FCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~  174 (209)
                       ...|+.+|+..+.+.    .++.++|++++.+.||.+.++
T Consensus       147 -~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~  186 (246)
T PRK05599        147 -NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS  186 (246)
T ss_pred             -CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence             135999999655444    444556899999999999876

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=147.16  Aligned_cols=147  Identities=24%  Similarity=0.204  Sum_probs=115.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~~   77 (209)
                      |+++||||+|+||++++++|.++ ++|++++|+..            .+++|++|.++++++++   ++|+||||||...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            89999999999999999999999 99999988643            35789999999888776   6899999999632


Q ss_pred             C------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      .      ..+++.+.+++|+.++.++++++.+.+ +..+|+++||.....+.+.              ...|+.+|+..+
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------~~~Y~~sK~a~~  133 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPG--------------GASAATVNGALE  133 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCC--------------chHHHHHHHHHH
Confidence            1      223566778999999999999987753 2357999998654322111              145999999776


Q ss_pred             HHHHHHh---hcCCCEEEEecCceecC
Q 028444          151 KIALQAA---SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       151 ~~~~~~~---~~~~~~~~~rp~~v~g~  174 (209)
                      .+.+.++   ++|++++.++||++-++
T Consensus       134 ~~~~~la~e~~~gi~v~~i~Pg~v~t~  160 (199)
T PRK07578        134 GFVKAAALELPRGIRINVVSPTVLTES  160 (199)
T ss_pred             HHHHHHHHHccCCeEEEEEcCCcccCc
Confidence            6665543   45899999999999876

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.88  E-value=2.5e-22  Score=148.17  Aligned_cols=193  Identities=21%  Similarity=0.229  Sum_probs=149.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~   76 (209)
                      |||+||||+|.+|++|.+.+.+.|.  +-..+ +...              .+|+++.++.+.++.  ++..|||+|+..
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf-~~sk--------------d~DLt~~a~t~~lF~~ekPthVIhlAAmV   66 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVF-IGSK--------------DADLTNLADTRALFESEKPTHVIHLAAMV   66 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEE-eccc--------------cccccchHHHHHHHhccCCceeeehHhhh
Confidence            5899999999999999999988875  21111 1111              249999999999886  578999999975


Q ss_pred             CC---CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc--cccccCChHHHHHHHHHH
Q 028444           77 EP---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADK  151 (209)
Q Consensus        77 ~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~  151 (209)
                      ..   +...+.+++..|+.-.-+++..+..+ ++++++++.|.+.|.....+|++|....  |+.+..-.|+.+|.+..-
T Consensus        67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv  145 (315)
T KOG1431|consen   67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV  145 (315)
T ss_pred             cchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence            33   45567789999999999999999998 5889999999999999999999887532  222222358999998887


Q ss_pred             HHHHHh-hcCCCEEEEecCceecCCCC---CcchhHHHHHHHHh--------------cCCceEEEEEEeeeeecC
Q 028444          152 IALQAA-SEGLPIVPVYPGVIYGPGKL---TTGNLVAKLVRLLF--------------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       152 ~~~~~~-~~~~~~~~~rp~~v~g~~~~---~~~~~~~~~~~~~~--------------~~~~~~~~~~~~dva~~i  209 (209)
                      ..+.|. ++|-..+++.|.++|||++.   ..+.+++.++.+..              +|.+...|+|++|+|+++
T Consensus       146 ~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  146 QNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            777776 56899999999999999874   23567888877654              234445689999999763

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=3.2e-22  Score=156.19  Aligned_cols=159  Identities=16%  Similarity=0.096  Sum_probs=116.0

Q ss_pred             EEEEEcC--CChhHHHHHHHHHhCCCeEEEEEcCC--CCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT--SDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~--~G~IG~~l~~~l~~~g~~V~~~~r~~--~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||  +++||++++++|+++|++|++++|+.  +..+.+..  ...+.++++|++|++++.++++       ++|+
T Consensus         9 ~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~   88 (256)
T PRK07889          9 RILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGLDG   88 (256)
T ss_pred             EEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            6999999  89999999999999999999998764  21111111  1257789999999998877653       5899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +|||||....          ..+++.+.+++|+.++..+++.+.+.+. .+++|++|+....+ .+.             
T Consensus        89 li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-~~~-------------  154 (256)
T PRK07889         89 VVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-WPA-------------  154 (256)
T ss_pred             EEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-CCc-------------
Confidence            9999997421          1123456799999999999999887653 25788887532110 000             


Q ss_pred             cCChHHHHHHHH----HHHHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~----e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|+..    +.+..++.++|++++.+.||++.+|.
T Consensus       155 -~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  195 (256)
T PRK07889        155 -YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA  195 (256)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence             13489999954    45555556679999999999999874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=5.1e-22  Score=155.37  Aligned_cols=160  Identities=22%  Similarity=0.242  Sum_probs=116.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++..|+..+ .....     ...++.++.+|++|.+++.++++       ++|+
T Consensus         9 ~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936          9 VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999998885432 11110     01257788999999998877664       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||+||...+      ..+++++.+++|+.++..+++.+.+.    ...+++|++||...+.+.+              .
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~--------------~  154 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP--------------L  154 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC--------------C
Confidence            9999996422      12345677999999998877766432    2236899999965442211              1


Q ss_pred             CChHHHHHHH----HHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~----~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+    ++.+..++.+++++++.++||.+.+|.
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  195 (261)
T PRK08936        155 FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence            2459999974    455555555679999999999999884

>TIGR02415 23BDH acetoin reductases

Probab=99.88  E-value=1.2e-22  Score=158.05  Aligned_cols=161  Identities=22%  Similarity=0.242  Sum_probs=120.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      .+++||||+|+||++++++|+++|++|+++.|+..+....    .. ..++.++.+|++|++++.+++.       ++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3699999999999999999999999999999875432211    11 1357889999999999877654       4799


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||+....      ..+++++.+++|+.++..+++++.+..    ..+++|++||.....+.+.              
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  146 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI--------------  146 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC--------------
Confidence            9999996422      223456779999999999888776531    2358999998655432211              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.++    +.+++++.++||.+.++.
T Consensus       147 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~  187 (254)
T TIGR02415       147 LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM  187 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence            2459999998887776553    348999999999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-22  Score=158.62  Aligned_cols=161  Identities=20%  Similarity=0.192  Sum_probs=122.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCCCCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||+.++++|+++|++ |++++|+.++...    +. ....+.++.+|+++++++.++++       ++|+
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (260)
T PRK06198          8 VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDA   87 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999 9999987543321    10 11257789999999998877664       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||+....      ..+.+...+++|+.++.++++++.+.+    ..+++|++||...+++...              
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------  153 (260)
T PRK06198         88 LVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF--------------  153 (260)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC--------------
Confidence            9999996421      122345679999999999999886542    1357999999877654321              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      ...|+.+|...+.+.+.++    ..+++++.++||+++++..
T Consensus       154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            1459999998887776554    3579999999999999853

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.88  E-value=8.6e-23  Score=160.08  Aligned_cols=158  Identities=22%  Similarity=0.193  Sum_probs=119.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+......    . ..++.++.+|++|.+++.++++       ++|+|
T Consensus        11 ~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~v   90 (264)
T PRK07576         11 NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVL   90 (264)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999765432211    1 1256788999999998877664       47999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||+....      ..+++.+.+++|+.++.++++++.+..  ..++||++||...+.+...              ...
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~--------------~~~  156 (264)
T PRK07576         91 VSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM--------------QAH  156 (264)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC--------------ccH
Confidence            999985311      223455678999999999999887642  2358999999765432211              245


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceec
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYG  173 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g  173 (209)
                      |+.+|...+.+.+.++    .++++++.++||.+.+
T Consensus       157 Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~  192 (264)
T PRK07576        157 VCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG  192 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence            9999997777766553    4689999999999874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=4.4e-22  Score=144.80  Aligned_cols=159  Identities=18%  Similarity=0.195  Sum_probs=124.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +||||||+.+||.+++++|.+.|.+|++.+|+..++++..+ .+...-..+|+.|.++.++++.       ..+++||||
T Consensus         7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNA   86 (245)
T COG3967           7 TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNA   86 (245)
T ss_pred             EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecc
Confidence            59999999999999999999999999999999887665333 2567788999999887766553       479999999


Q ss_pred             ccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           74 ALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        74 ~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |+...        ..++..+.+++|+.++.+|..++.++.   ....+|++||..++-+....|.              |
T Consensus        87 GIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~Pv--------------Y  152 (245)
T COG3967          87 GIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPV--------------Y  152 (245)
T ss_pred             cccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccccc--------------c
Confidence            97422        112335668899999999999987752   2356999999887766655555              9


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      +++|++...+...+    ...++.|.-+-|+.|.++
T Consensus       153 caTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         153 CATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999766655444    334799999999999986

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.2e-22  Score=153.54  Aligned_cols=159  Identities=21%  Similarity=0.199  Sum_probs=121.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|++.+...+    ....++.++++|++|.+++.++++       ++|+||
T Consensus         8 ~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   87 (237)
T PRK07326          8 VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLI   87 (237)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            699999999999999999999999999999976543221    111368899999999998877665       689999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |+++....      ..+++.+.+++|+.++..+++++.+.+  +.+++|++||...+.+...              ...|
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~y  153 (237)
T PRK07326         88 ANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG--------------GAAY  153 (237)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC--------------CchH
Confidence            99986422      122345679999999999999887642  2357999999765432211              1459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      +.+|...+.+.+.+    .+.|++++.++|+++.++
T Consensus       154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~  189 (237)
T PRK07326        154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATH  189 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCc
Confidence            99999777666654    345899999999999876

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.2e-22  Score=161.82  Aligned_cols=159  Identities=20%  Similarity=0.175  Sum_probs=121.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.+..     ..++.++++|++|.+++.++++       ++|++
T Consensus        10 ~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~l   89 (334)
T PRK07109         10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTW   89 (334)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            69999999999999999999999999999998654332211     1357889999999999887754       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++++.+++|+.++.++++.+.+.+   +.++||++||...+.+.+.              ..
T Consensus        90 InnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~--------------~~  155 (334)
T PRK07109         90 VNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL--------------QS  155 (334)
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc--------------ch
Confidence            999996321      223456789999999998888776542   2468999999887754321              14


Q ss_pred             hHHHHHHHHHHHHHH----Hhh--cCCCEEEEecCceecC
Q 028444          141 QYERSKAVADKIALQ----AAS--EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~--~~~~~~~~rp~~v~g~  174 (209)
                      .|+.+|+..+.+.+.    +..  .++++++++||.+.+|
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~  195 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP  195 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence            599999966655444    433  3699999999999887

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.88  E-value=2.1e-22  Score=155.56  Aligned_cols=162  Identities=23%  Similarity=0.239  Sum_probs=117.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC-CCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|+++.|+ ..+.....     ...++.++.+|++|++++.++++       ++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            478999999999999999999999999998883 22211110     11368899999999988876653       489


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||...+      ..+++.+.++.|+.++..+++.+.+.+   +.+++|++||.....+..+              
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------  146 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG--------------  146 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC--------------
Confidence            99999996432      223456678999999999887765432   3468999998654432211              


Q ss_pred             CChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ...|+.+|...+.+.+.    +.+.+++++.++||++.+|..
T Consensus       147 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~  188 (242)
T TIGR01829       147 QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMV  188 (242)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccc
Confidence            14499999955555444    445689999999999998753

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4e-22  Score=158.05  Aligned_cols=158  Identities=20%  Similarity=0.208  Sum_probs=116.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC---------CCCCCC----CC-CCceEEEEccCCCHHHHHHHhc---
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---------SDISGL----PS-EGALELVYGDVTDYRSLVDACF---   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~---------~~~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~---   64 (209)
                      +++||||+++||++++++|+++|++|++++|+.         ++.+..    .. ..++.++.+|++|.+++.++++   
T Consensus         8 ~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (286)
T PRK07791          8 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAV   87 (286)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHH
Confidence            699999999999999999999999999988764         211111    11 1357788999999988876653   


Q ss_pred             ----CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC---------ccEEEEEccceeeccCCcc
Q 028444           65 ----GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDGY  125 (209)
Q Consensus        65 ----~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~ss~~~~~~~~~~  125 (209)
                          ++|++|||||....      ..+++++.+++|+.++..+++++.+.+.         ..+||++||...+.+..+ 
T Consensus        88 ~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-  166 (286)
T PRK07791         88 ETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVG-  166 (286)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCC-
Confidence                57999999997422      2245677899999999999998864321         148999999765433221 


Q ss_pred             ccCCCccccccccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecC
Q 028444          126 IADENQVHEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~  174 (209)
                                   ...|+.+|++.+.+.    .++.++|++++.+.|| +.++
T Consensus       167 -------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~  205 (286)
T PRK07791        167 -------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR  205 (286)
T ss_pred             -------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC
Confidence                         145999999655554    4455679999999998 5444

>PRK08324 short chain dehydrogenase; Validated

Probab=99.87  E-value=2.3e-22  Score=176.15  Aligned_cols=193  Identities=22%  Similarity=0.202  Sum_probs=138.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+...    ...++.++.+|++|.+++.++++       ++|+||
T Consensus       424 ~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI  503 (681)
T PRK08324        424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVV  503 (681)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6999999999999999999999999999999865432211    11368899999999998877664       689999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||....      ..+++...+++|+.++..+++++.+..   + .++||++||..++.+..+              ..
T Consensus       504 ~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--------------~~  569 (681)
T PRK08324        504 SNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--------------FG  569 (681)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC--------------cH
Confidence            99996422      223466789999999999988876532   2 268999999766533211              24


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCcee-cCCCCCcchh-----------HHHHHHHHhcCCceEEEEEEee
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIY-GPGKLTTGNL-----------VAKLVRLLFSQHFSLVFFHCQI  204 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~-g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~d  204 (209)
                      .|+.+|.+.+.+.+.++    +.|++++.++|+.+| +.+... ..+           ...+...+..+.+...+++++|
T Consensus       570 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D  648 (681)
T PRK08324        570 AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT-GEWIEARAAAYGLSEEELEEFYRARNLLKREVTPED  648 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc-chhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence            59999998888877764    347999999999998 443211 010           1111122344555557889999


Q ss_pred             eeecC
Q 028444          205 TCHAI  209 (209)
Q Consensus       205 va~~i  209 (209)
                      +|+++
T Consensus       649 vA~a~  653 (681)
T PRK08324        649 VAEAV  653 (681)
T ss_pred             HHHHH
Confidence            98763

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.87  E-value=6.7e-22  Score=158.97  Aligned_cols=162  Identities=19%  Similarity=0.189  Sum_probs=117.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-------CCceEEEEccCCC--HHHHH---HHhcC--cC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTD--YRSLV---DACFG--CH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~Dl~~--~~~~~---~~~~~--~d   67 (209)
                      .++||||||+||++++++|+++|++|++++|+.++++++.+       ..++..+.+|+++  .+.+.   +.+.+  +|
T Consensus        55 ~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~did  134 (320)
T PLN02780         55 WALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVG  134 (320)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Confidence            58999999999999999999999999999998765433211       1256778899985  33333   33333  56


Q ss_pred             EEEEcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           68 VIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        68 ~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ++|||||...+        ..+++++.+++|+.++..+++++.+.+   +.+++|++||..++.... .+          
T Consensus       135 ilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~p----------  203 (320)
T PLN02780        135 VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-DP----------  203 (320)
T ss_pred             EEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-Cc----------
Confidence            99999997421        112345689999999999999987642   346899999986642110 00          


Q ss_pred             ccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          137 YFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ....|+.||++.+.+.+.    +.++|+++++++||.+.++.
T Consensus       204 -~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~  245 (320)
T PLN02780        204 -LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM  245 (320)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCc
Confidence             125699999966655544    44568999999999999873

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.4e-21  Score=146.92  Aligned_cols=157  Identities=17%  Similarity=0.162  Sum_probs=113.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC--
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (209)
                      +++||||+|+||++++++|+++|++|++++|+. +....... .....+.+|++|.+++.+.+.++|++|||||....  
T Consensus        16 ~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~   94 (245)
T PRK12367         16 RIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHGINPGGR   94 (245)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCC
Confidence            699999999999999999999999999999876 22211111 12357889999999999988899999999996322  


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHhcCC-----cc-EEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH-
Q 028444           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VE-KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD-  150 (209)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~-~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e-  150 (209)
                       ..+++.+.+++|+.++.++++++.+.+.     .+ .++..||.....+.               ....|++||++.+ 
T Consensus        95 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~---------------~~~~Y~aSKaal~~  159 (245)
T PRK12367         95 QDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA---------------LSPSYEISKRLIGQ  159 (245)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC---------------CCchhHHHHHHHHH
Confidence             2345678899999999999999876531     12 24344443322110               0134999999753 


Q ss_pred             --HHHHHH----hhcCCCEEEEecCceecC
Q 028444          151 --KIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       151 --~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                        .+.+++    .+.++.+..+.||.+.++
T Consensus       160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~  189 (245)
T PRK12367        160 LVSLKKNLLDKNERKKLIIRKLILGPFRSE  189 (245)
T ss_pred             HHHHHHHHHHhhcccccEEEEecCCCcccc
Confidence              333333    345889999999999876

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.6e-21  Score=146.07  Aligned_cols=161  Identities=20%  Similarity=0.172  Sum_probs=124.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh---c--CcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---F--GCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~--~~d~vi~~a~~~   76 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+++.. .+++++.+|+++.+.+..++   .  ++|++||++|..
T Consensus         3 ~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~   81 (222)
T PRK06953          3 TVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY   81 (222)
T ss_pred             eEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence            79999999999999999999999999999998665443332 25678999999999888764   2  489999999975


Q ss_pred             CC--------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEcccee-eccCCccccCCCccccccccCChHHHH
Q 028444           77 EP--------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        77 ~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~-~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ..        +.++++..+++|+.++.++++++.+..  ...+++++||... ++......            ...|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~------------~~~Y~~s  149 (222)
T PRK06953         82 GPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTT------------GWLYRAS  149 (222)
T ss_pred             cCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCC------------ccccHHh
Confidence            21        223466789999999999999998643  2357899988644 33211000            0249999


Q ss_pred             HHHHHHHHHHHhh--cCCCEEEEecCceecCC
Q 028444          146 KAVADKIALQAAS--EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       146 K~~~e~~~~~~~~--~~~~~~~~rp~~v~g~~  175 (209)
                      |...+.+.+.+..  .+++++.++||++.++.
T Consensus       150 K~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~  181 (222)
T PRK06953        150 KAALNDALRAASLQARHATCIALHPGWVRTDM  181 (222)
T ss_pred             HHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence            9999998888753  37899999999999874

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.87  E-value=5e-22  Score=154.13  Aligned_cols=161  Identities=22%  Similarity=0.243  Sum_probs=116.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||+++++.|+++|++|+++.+ +.+..+..    . ...++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            7999999999999999999999999987754 33322111    0 11268899999999988876653       5899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC------ccEEEEEccceeeccCCccccCCCccccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      ||||||...+       ..+++...+++|+.++..+++.+.+...      ..+||++||...+......          
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~----------  153 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE----------  153 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC----------
Confidence            9999996422       1123456799999999999876654321      2369999987543221100          


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                         ...|+.+|.+.+.+.+.++    +.++++++++||++.+|.
T Consensus       154 ---~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~  194 (248)
T PRK06947        154 ---YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI  194 (248)
T ss_pred             ---CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence               1349999998777666554    348999999999999884

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.87  E-value=5.5e-22  Score=153.12  Aligned_cols=160  Identities=19%  Similarity=0.199  Sum_probs=118.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++||||+|+||++++++|+++|++|++++|+.. +.+.    +. ...++.++.+|++|.+++..+++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999887532 1111    11 11358899999999998877654       47999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHH-h---cCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK-E---TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~-~---~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..+++..++++|+.++.++++++. +   ..+.+++|++||...+.+.++              .
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~  146 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG--------------Q  146 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC--------------C
Confidence            999996422      234567789999999999998763 2   113468999999765433211              1


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|.+.+.+.+.    +.++|++++.++||.+.++..
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  187 (239)
T TIGR01831       147 VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEML  187 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccc
Confidence            3499999966555544    445689999999999998854

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.4e-21  Score=151.70  Aligned_cols=159  Identities=20%  Similarity=0.229  Sum_probs=119.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc------CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF------GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.    ...++.++.+|++|.+++..+++      ++|+|||
T Consensus         7 ~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~   86 (263)
T PRK09072          7 RVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLIN   86 (263)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence            5999999999999999999999999999999865432221    12368899999999998876653      5799999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      +||....      ..+++.+.+++|+.++.++++.+.+..   +.+++|++||...+.+..+              ...|
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y  152 (263)
T PRK09072         87 NAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG--------------YASY  152 (263)
T ss_pred             CCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC--------------ccHH
Confidence            9996422      112345678999999999999987632   2357999988654322211              1459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      +.+|.+.+.+.+.+    .+.+++++.+.||.+.++
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~  188 (263)
T PRK09072        153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTA  188 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence            99999766555444    456899999999999776

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.1e-21  Score=151.52  Aligned_cols=160  Identities=20%  Similarity=0.220  Sum_probs=116.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCC-------CC-CCceEEEEccCCCHHHHHHHhc-------C
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGL-------PS-EGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~-------~~-~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      +++||||+|+||++++++|+++|++|+++.++..+. +..       .. ..++.++++|++|.+++.++++       +
T Consensus        10 ~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   89 (257)
T PRK12744         10 VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGR   89 (257)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCC
Confidence            699999999999999999999999977776643221 110       00 1257889999999999887664       5


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|++||+||....      ..+++.+.+++|+.++..+++++.+.+. .+++++++|..+....+              .
T Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~--------------~  155 (257)
T PRK12744         90 PDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP--------------F  155 (257)
T ss_pred             CCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC--------------C
Confidence            8999999996321      2234667899999999999999987642 24666653332221111              1


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      +..|+.+|++.+.+.+.++    +++++++.++||.+.++.
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~  196 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF  196 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence            2459999998887777665    347999999999998863

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.7e-21  Score=150.94  Aligned_cols=161  Identities=20%  Similarity=0.225  Sum_probs=118.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------------CCCceEEEEccCCCHHHHHHHhc-----
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------------SEGALELVYGDVTDYRSLVDACF-----   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~~Dl~~~~~~~~~~~-----   64 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.....            ...++.++++|+++.+++.++++     
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   87 (273)
T PRK08278          8 TLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVER   87 (273)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            6999999999999999999999999999999764321110            01357889999999999877764     


Q ss_pred             --CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccc
Q 028444           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (209)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~  133 (209)
                        ++|+||||||....      ..+++++++++|+.++.++++++.+.+   +..++|++||.....+.         +.
T Consensus        88 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~  158 (273)
T PRK08278         88 FGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---------WF  158 (273)
T ss_pred             hCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc---------cc
Confidence              68999999996422      123456788999999999999997643   23578899875322111         00


Q ss_pred             cccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecC-ceecC
Q 028444          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPG-VIYGP  174 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~-~v~g~  174 (209)
                         .....|+.+|.+.+.+.+.++    +++++++.+.|+ .+.++
T Consensus       159 ---~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~  201 (273)
T PRK08278        159 ---APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA  201 (273)
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH
Confidence               112569999998887776654    458999999999 45553

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.87  E-value=1e-21  Score=151.40  Aligned_cols=159  Identities=25%  Similarity=0.227  Sum_probs=118.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCC----CCC-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++|||++|+||++++++|+++|++|++++|+.. ....    ... ...+.++.+|++|.+++.+++.       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999988752 1111    111 1247789999999998877764       46999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||+||....      ..+++.+.+++|+.++.++++.+.+..   +.++||++||...+.+.+.              +.
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~--------------~~  146 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG--------------QA  146 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC--------------Cc
Confidence            999997422      223456789999999999999887642   3468999999654432211              14


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.+.    ..|++++.++||.+.++.
T Consensus       147 ~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~  185 (239)
T TIGR01830       147 NYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDM  185 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChh
Confidence            59999997776665553    358999999999998763

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.87  E-value=3.7e-21  Score=146.50  Aligned_cols=184  Identities=22%  Similarity=0.190  Sum_probs=140.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC----CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      +-|+|||||+|++++++|.+.|.+|++-+|.++.    ++..-+..++-++..|+.|+++|+++++..++|||+-|  +.
T Consensus        64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIG--rd  141 (391)
T KOG2865|consen   64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIG--RD  141 (391)
T ss_pred             EEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeec--cc
Confidence            6789999999999999999999999999997542    22233346899999999999999999999999999998  34


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                      ++.....+.++|+.+..+|++.|+.. ++.+||++|+...  +...              .+.|-.+|+++|...++..+
T Consensus       142 ~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lga--nv~s--------------~Sr~LrsK~~gE~aVrdafP  204 (391)
T KOG2865|consen  142 YETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGA--NVKS--------------PSRMLRSKAAGEEAVRDAFP  204 (391)
T ss_pred             cccCCcccccccchHHHHHHHHHHhh-Chhheeehhhccc--cccC--------------hHHHHHhhhhhHHHHHhhCC
Confidence            55566778899999999999999998 6899999998641  1100              14599999999998877443


Q ss_pred             cCCCEEEEecCceecCCCCCcchhHHHHHHHH------hcCC-ceEEEEEEeeeeecC
Q 028444          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLL------FSQH-FSLVFFHCQITCHAI  209 (209)
Q Consensus       159 ~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~dva~~i  209 (209)
                         ..+|+||+.+||..+.. -+....+.+.+      ..|+ ..-..+++-|||++|
T Consensus       205 ---eAtIirPa~iyG~eDrf-ln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~I  258 (391)
T KOG2865|consen  205 ---EATIIRPADIYGTEDRF-LNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAI  258 (391)
T ss_pred             ---cceeechhhhcccchhH-HHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHH
Confidence               37999999999976522 12333333321      1122 333568999999875

>PRK06484 short chain dehydrogenase; Validated

Probab=99.87  E-value=3.5e-22  Score=170.54  Aligned_cols=160  Identities=23%  Similarity=0.265  Sum_probs=123.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+++||++++++|+++|++|++++|+.++++.+..  ..++.++++|++|++++.++++       ++|+||||
T Consensus         7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~n   86 (520)
T PRK06484          7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNN   86 (520)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999998665433221  1257789999999999877664       48999999


Q ss_pred             CccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---Cc-cEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           73 AALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        73 a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||...+        ..+++++++++|+.++..+++++.+.+   +. .++|++||.....+..+              ..
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~--------------~~  152 (520)
T PRK06484         87 AGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK--------------RT  152 (520)
T ss_pred             CCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC--------------Cc
Confidence            996321        223467789999999999999998753   22 38999999765533221              14


Q ss_pred             hHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|+..+.+.+.    +.+.+++++.++||.+.++.
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence            599999976665554    44568999999999998774

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.6e-22  Score=153.10  Aligned_cols=160  Identities=21%  Similarity=0.198  Sum_probs=119.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCCC--CCceEEEEccCCCHHHHHHHhcCc-----------C
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDACFGC-----------H   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----------d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+. +.+..+..  ..+++++++|++|.+++.++++++           +
T Consensus         3 ~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK06924          3 YVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSI   82 (251)
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCce
Confidence            599999999999999999999999999999976 22221111  136889999999999988777532           2


Q ss_pred             EEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ++||+||...+       ..+++.+.+++|+.++..+++.+.+..    ..++||++||..++.+.+             
T Consensus        83 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  149 (251)
T PRK06924         83 HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF-------------  149 (251)
T ss_pred             EEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC-------------
Confidence            79999986422       223455678899999998888776542    235799999976543221             


Q ss_pred             ccCChHHHHHHHHHHHHHHHhh------cCCCEEEEecCceecCC
Q 028444          137 YFCTQYERSKAVADKIALQAAS------EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~------~~~~~~~~rp~~v~g~~  175 (209)
                       ....|+.+|++.+.+.+.++.      .+++++.++||.+.++.
T Consensus       150 -~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        150 -GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             -CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence             124599999988888776642      37999999999998763

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.87  E-value=6.9e-22  Score=154.24  Aligned_cols=160  Identities=18%  Similarity=0.201  Sum_probs=119.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHh----CCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhcC-----
Q 028444            2 KILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACFG-----   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~----~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~-----   65 (209)
                      .++||||+++||++++++|++    .|++|++++|+.++++.+.       ...++.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999987    7999999999865433211       112578899999999988776632     


Q ss_pred             ------cCEEEEcCccCCC----C-----CCCccchhhhHHHHHHHHHHHHHhcCC-----ccEEEEEccceeeccCCcc
Q 028444           66 ------CHVIFHTAALVEP----W-----LPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGY  125 (209)
Q Consensus        66 ------~d~vi~~a~~~~~----~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~i~~ss~~~~~~~~~~  125 (209)
                            .|+||||||....    .     .+++.+.+++|+.++..+++.+.+...     .+++|++||...+.+.+. 
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~-  160 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG-  160 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC-
Confidence                  2589999996321    1     123457899999999999998876531     257999999765432211 


Q ss_pred             ccCCCccccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          126 IADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                                   ...|+.+|.+.+.+.+.+    .+.+++++.+.||++.++.
T Consensus       161 -------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~  201 (256)
T TIGR01500       161 -------------WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM  201 (256)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence                         245999999777666654    3458999999999998873

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.87  E-value=1e-21  Score=171.52  Aligned_cols=158  Identities=19%  Similarity=0.219  Sum_probs=119.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+..+...       ....+..+++|++|.+++.++++       ++|
T Consensus       416 vvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iD  495 (676)
T TIGR02632       416 VAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVD  495 (676)
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            6999999999999999999999999999999765432211       11256789999999999888775       689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||||....      ..+++...+++|+.++..+++.+.+.+    ...++|++||...+.+..+             
T Consensus       496 ilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~-------------  562 (676)
T TIGR02632       496 IVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN-------------  562 (676)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC-------------
Confidence            99999996422      123456778999999998887665432    1357999999755432211             


Q ss_pred             cCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceec
Q 028444          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYG  173 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g  173 (209)
                       ...|+.+|.+.+.+.+.++    +.|++++.++|+.++.
T Consensus       563 -~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       563 -ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence             1459999998888877654    3589999999999974

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=5.4e-21  Score=149.17  Aligned_cols=159  Identities=19%  Similarity=0.195  Sum_probs=119.9

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCCC---------C------CCC-CCCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI---------S------GLP-SEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~~---------~------~~~-~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      +++||||+|  +||++++++|+++|++|++++|++.+.         +      ... ...++.++.+|+++.+++..++
T Consensus         7 ~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   86 (256)
T PRK12748          7 IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVF   86 (256)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            699999995  799999999999999999999872210         0      000 0125889999999999887665


Q ss_pred             c-------CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCcccc
Q 028444           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIA  127 (209)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~  127 (209)
                      +       ++|+|||+||....      ..+++++.+++|+.++..+++++.+.+   ..+++|++||...+.+..+   
T Consensus        87 ~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  163 (256)
T PRK12748         87 YAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD---  163 (256)
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC---
Confidence            4       47999999996422      112356679999999999999987643   2358999999876653321   


Q ss_pred             CCCccccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                                 ...|+.+|.+.+.+.+.++    ..+++++.++||.+.++
T Consensus       164 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~  203 (256)
T PRK12748        164 -----------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG  203 (256)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence                       1459999998888766653    45899999999999876

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.6e-21  Score=148.66  Aligned_cols=160  Identities=19%  Similarity=0.185  Sum_probs=116.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCC--HHHHHHHh--------cC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTD--YRSLVDAC--------FG   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~--~~~~~~~~--------~~   65 (209)
                      +++||||+|+||+++++.|+++|++|++++|+.++.+...      ....+.++.+|+++  .+++.+++        .+
T Consensus         8 ~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~   87 (239)
T PRK08703          8 TILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGK   87 (239)
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCC
Confidence            6999999999999999999999999999999875432211      01246678899975  33443332        45


Q ss_pred             cCEEEEcCccCC---CC----CCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccc
Q 028444           66 CHVIFHTAALVE---PW----LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        66 ~d~vi~~a~~~~---~~----~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      +|+||||||...   +.    .+++.+.+++|+.++..+++++.+..   +..++|++||.....+..            
T Consensus        88 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------  155 (239)
T PRK08703         88 LDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKA------------  155 (239)
T ss_pred             CCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCC------------
Confidence            899999999632   11    12345678999999999999887642   246899999864432111            


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hc-CCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SE-GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~-~~~~~~~rp~~v~g~~  175 (209)
                        ....|+.+|++.+.+.+.++    ++ +++++.++||++++|.
T Consensus       156 --~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~  198 (239)
T PRK08703        156 --YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ  198 (239)
T ss_pred             --CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence              11459999998887776654    23 5999999999999985

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2e-21  Score=170.14  Aligned_cols=161  Identities=19%  Similarity=0.203  Sum_probs=125.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++++.     ...++.++++|++|.+++.++++       ++|+
T Consensus       372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            36999999999999999999999999999999865433221     11368899999999999887765       5899


Q ss_pred             EEEcCccCCC-----C---CCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP-----W---LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~-----~---~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +|||||....     .   .+++.+.+++|+.++.++++++.+.+   +.++||++||..++.+.+..            
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  519 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRF------------  519 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCc------------
Confidence            9999996311     1   12456789999999999988876542   34689999998877543221            


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                        ..|+.+|.+.+.+.+.+    .++++++++++||.+.++.
T Consensus       520 --~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~  559 (657)
T PRK07201        520 --SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM  559 (657)
T ss_pred             --chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccc
Confidence              45999999777766554    4468999999999999874

>PRK08017 oxidoreductase; Provisional

Probab=99.86  E-value=4.2e-21  Score=149.57  Aligned_cols=158  Identities=22%  Similarity=0.221  Sum_probs=118.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~d~vi~~a   73 (209)
                      +++||||+|+||+++++.|+++|++|++++|+.++.+.... .++.++++|++|.+++.++++        ++|.+||+|
T Consensus         4 ~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            79999999999999999999999999999998765543322 257889999999888766543        468999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.++.|+.++.++++.+.+..   +.+++|++||...+.+...              ...|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~Y~~  148 (256)
T PRK08017         83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG--------------RGAYAA  148 (256)
T ss_pred             CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC--------------ccHHHH
Confidence            96321      223455789999999998866554321   3468999999754432211              145999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      +|...+.+.+.+    .+.++++++++||.+.++
T Consensus       149 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  182 (256)
T PRK08017        149 SKYALEAWSDALRMELRHSGIKVSLIEPGPIRTR  182 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccc
Confidence            999888776543    456899999999998765

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.8e-21  Score=153.63  Aligned_cols=162  Identities=17%  Similarity=0.107  Sum_probs=116.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC----------CCC----CC-CCceEEEEccCCCHHHHHHHhc--
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI----------SGL----PS-EGALELVYGDVTDYRSLVDACF--   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~----------~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~--   64 (209)
                      +++||||+++||++++++|++.|++|++++|+....          +.+    .. ..++.++++|++|++++.++++  
T Consensus        10 ~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   89 (305)
T PRK08303         10 VALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERI   89 (305)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            699999999999999999999999999999974311          111    00 1246789999999999877663  


Q ss_pred             -----CcCEEEEcC-ccC------CC----CCCCccchhhhHHHHHHHHHHHHHhcCC---ccEEEEEccceeeccCCcc
Q 028444           65 -----GCHVIFHTA-ALV------EP----WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGY  125 (209)
Q Consensus        65 -----~~d~vi~~a-~~~------~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~ss~~~~~~~~~~  125 (209)
                           ++|++|||| |..      .+    ..+++.+.+++|+.++..+++++.+.+.   ..+||++||........+.
T Consensus        90 ~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~  169 (305)
T PRK08303         90 DREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHY  169 (305)
T ss_pred             HHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCC
Confidence                 589999999 631      11    1234556789999999999998877542   3589999985432111000


Q ss_pred             ccCCCccccccccCChHHHHHHHHHH----HHHHHhhcCCCEEEEecCceecC
Q 028444          126 IADENQVHEEKYFCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                                 .....|+.+|+....    +..++.+.|++++.+.||++.++
T Consensus       170 -----------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~  211 (305)
T PRK08303        170 -----------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE  211 (305)
T ss_pred             -----------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence                       011359999995554    44555567899999999999876

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-21  Score=151.05  Aligned_cols=159  Identities=13%  Similarity=0.130  Sum_probs=120.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC--CCceEEEEccCCCHHHHHHHhc---CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVTDYRSLVDACF---GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    ..  ..++.++.+|++|++++.++++   ++|++|||
T Consensus         9 ~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~   88 (259)
T PRK06125          9 RVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVNN   88 (259)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            699999999999999999999999999999986543321    11  1357889999999999877664   58999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++...+++|+.++..+++++.+.+   +.+++|++||.....+...              ...|+
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------~~~y~  154 (259)
T PRK06125         89 AGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDAD--------------YICGS  154 (259)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCC--------------chHhH
Confidence            996421      223566789999999999999886543   2357999998654322111              13489


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                      .+|.+.+.+.+.++    +.|++++.++||.+.+|
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence            99997766666543    46899999999999887

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.86  E-value=4.5e-21  Score=150.57  Aligned_cols=160  Identities=19%  Similarity=0.197  Sum_probs=112.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCC----CCC--CCceEEEEccCCCHHHH----HHHh-------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LPS--EGALELVYGDVTDYRSL----VDAC-------   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~~~--~~~~~~~~~Dl~~~~~~----~~~~-------   63 (209)
                      .++||||+|+||++++++|+++|++|+++.|+. ++++.    +..  ..++.++.+|++|.+++    .+++       
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            689999999999999999999999999987643 32211    111  12466789999998754    3332       


Q ss_pred             cCcCEEEEcCccCCC------CCC-----------CccchhhhHHHHHHHHHHHHHhcCC---------ccEEEEEccce
Q 028444           64 FGCHVIFHTAALVEP------WLP-----------DPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFF  117 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~------~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~ss~~  117 (209)
                      .++|+||||||...+      ...           ++.+++++|+.++..+++++.+.+.         ..++|++||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            358999999996321      111           2446799999999999998865531         13577777754


Q ss_pred             eeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       118 ~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...+..              .+..|+.+|++.+.+.+.+    .++|++++.++||++.+|.
T Consensus       163 ~~~~~~--------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~  210 (267)
T TIGR02685       163 TDQPLL--------------GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD  210 (267)
T ss_pred             ccCCCc--------------ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc
Confidence            332111              1246999999777666654    3468999999999997764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=5.8e-21  Score=147.08  Aligned_cols=159  Identities=16%  Similarity=0.173  Sum_probs=125.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      .+|||||++++|++++.+|+++|.++.+.+.+++..++..    ..+.+..+.||+++++++.+..+       ++|++|
T Consensus        40 ~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILV  119 (300)
T KOG1201|consen   40 IVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDILV  119 (300)
T ss_pred             EEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceEEE
Confidence            5899999999999999999999999999999876543322    11358899999999999877664       589999


Q ss_pred             EcCccC------CCCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||..      +...+..++.+++|+.+.....+++.+.+   ..+++|.++|..++-+..+.              .+
T Consensus       120 NNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl--------------~~  185 (300)
T KOG1201|consen  120 NNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL--------------AD  185 (300)
T ss_pred             eccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc--------------hh
Confidence            999974      22344567889999999999999998764   34689999998877554443              34


Q ss_pred             HHHHHH----HHHHHHHHHh---hcCCCEEEEecCceecC
Q 028444          142 YERSKA----VADKIALQAA---SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       142 Y~~sK~----~~e~~~~~~~---~~~~~~~~~rp~~v~g~  174 (209)
                      |++||.    ..|.+..++.   ..|++.+.+.|+.+-+.
T Consensus       186 YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg  225 (300)
T KOG1201|consen  186 YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG  225 (300)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc
Confidence            999999    4556665553   24799999999998753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=5.5e-21  Score=152.92  Aligned_cols=156  Identities=21%  Similarity=0.207  Sum_probs=116.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCCC----CC-CCceEEEEccCCCHHHHHHHhc------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGL----PS-EGALELVYGDVTDYRSLVDACF------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++.+++.. ..+..    .. ..++.++.+|++|.+++.++++      ++|+
T Consensus        13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~   92 (306)
T PRK07792         13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDI   92 (306)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCE
Confidence            36999999999999999999999999999887532 21111    11 1357889999999988877664      5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC----------ccEEEEEccceeeccCCccccCCCcc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----------VEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----------~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                      ||||||....      ..+++.+.+++|+.++.++++++.+.+.          ..++|++||...+.+..+.       
T Consensus        93 li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  165 (306)
T PRK07792         93 VVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ-------  165 (306)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCC-------
Confidence            9999997532      2245667899999999999998754321          1489999997655332211       


Q ss_pred             ccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCc
Q 028444          133 HEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGV  170 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~  170 (209)
                             ..|+.+|.+.+.+.+.+    .++|++++.+.|+.
T Consensus       166 -------~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        166 -------ANYGAAKAGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence                   34999999777766554    35689999999984

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.85  E-value=9.8e-21  Score=148.13  Aligned_cols=162  Identities=21%  Similarity=0.194  Sum_probs=121.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--------CCceEEEEccCCCHHHHHHHh--------c
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--------EGALELVYGDVTDYRSLVDAC--------F   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~--------~   64 (209)
                      +.++||||+.+||+++|++|++.|.+|++.+|+.++.++...        ..++..+.+|+++.+++++++        .
T Consensus         9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G   88 (270)
T KOG0725|consen    9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFG   88 (270)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCC
Confidence            369999999999999999999999999999998775433211        135899999999988766554        3


Q ss_pred             CcCEEEEcCccCC-------CCCCCccchhhhHHH-HHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccc
Q 028444           65 GCHVIFHTAALVE-------PWLPDPSRFFAVNVE-GLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (209)
Q Consensus        65 ~~d~vi~~a~~~~-------~~~~~~~~~~~~n~~-~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~  133 (209)
                      ++|++|||||...       .+.+.|++.+++|+. +...+.+++.+..   +...++++||...+......+       
T Consensus        89 kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~-------  161 (270)
T KOG0725|consen   89 KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG-------  161 (270)
T ss_pred             CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc-------
Confidence            5899999999632       234567889999999 5777777665542   234688888876654322220       


Q ss_pred             cccccCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecCC
Q 028444          134 EEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                            ..|+.+|.+.+++    +.++.++|+|++++.||.+.++.
T Consensus       162 ------~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  162 ------VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             ------ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence                  2399999955554    55566789999999999999985

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.85  E-value=6.4e-21  Score=153.04  Aligned_cols=173  Identities=18%  Similarity=0.129  Sum_probs=121.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+++||++++++|+++| ++|++++|+.++.+++    . ....+.++.+|++|.+++..+++       ++|+
T Consensus         5 ~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   84 (314)
T TIGR01289         5 TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDA   84 (314)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            69999999999999999999999 9999999976543221    1 11357888999999988876653       5899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-----ccEEEEEccceeeccCC-c---cccCCCc-
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTD-G---YIADENQ-  131 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~i~~ss~~~~~~~~-~---~~~~e~~-  131 (209)
                      +|||||...+       ..++++..+++|+.++..+++.+.+.+.     .++||++||...+.... +   .+.+... 
T Consensus        85 lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  164 (314)
T TIGR01289        85 LVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDL  164 (314)
T ss_pred             EEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccccc
Confidence            9999996422       1234567899999999999888766421     36899999987653210 0   0000000 


Q ss_pred             ------c--------ccccccCChHHHHHHHHHHHHHHHh-----hcCCCEEEEecCcee-cC
Q 028444          132 ------V--------HEEKYFCTQYERSKAVADKIALQAA-----SEGLPIVPVYPGVIY-GP  174 (209)
Q Consensus       132 ------~--------~~~~~~~~~Y~~sK~~~e~~~~~~~-----~~~~~~~~~rp~~v~-g~  174 (209)
                            +        ..+..++..|+.||.+...+.+.++     +.++++++++||++. ++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~  227 (314)
T TIGR01289       165 SGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTG  227 (314)
T ss_pred             ccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCc
Confidence                  0        0111234679999997666555553     247999999999995 54

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.6e-21  Score=145.88  Aligned_cols=158  Identities=15%  Similarity=0.037  Sum_probs=116.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHh-------c-CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDAC-------F-GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~-------~-~~d~   68 (209)
                      +++||||+++||++++++|+++|++|+++.|+.++++++.+     ..++..+++|++|++++.+++       . ++|+
T Consensus         7 ~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~   86 (227)
T PRK08862          7 IILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDV   86 (227)
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCE
Confidence            69999999999999999999999999999998765432211     125678889999999887665       3 6899


Q ss_pred             EEEcCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +|||||...   +    ..+++.+.+++|+.++..+++.+.+.+    +.+.+|++||...+.   .             
T Consensus        87 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~-------------  150 (227)
T PRK08862         87 LVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ---D-------------  150 (227)
T ss_pred             EEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---C-------------
Confidence            999997421   1    112345577889999998887765432    235899999854321   0             


Q ss_pred             cCChHHHHHHHHHH----HHHHHhhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                       +..|+.+|+..+.    +..++.+++++++.+.||++.++..
T Consensus       151 -~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~  192 (227)
T PRK08862        151 -LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGE  192 (227)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCc
Confidence             1459999995554    4455556789999999999999853

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=9.4e-21  Score=146.07  Aligned_cols=159  Identities=19%  Similarity=0.167  Sum_probs=119.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||+++++.|+++|++|++++|++.+.+.+    ....++.++++|+++.+++.++++       ++|.+|
T Consensus         7 ~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii   86 (238)
T PRK05786          7 KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLV   86 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            799999999999999999999999999999986543222    111357899999999998877654       369999


Q ss_pred             EcCccCCC----CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceee-ccCCccccCCCccccccccCChHHH
Q 028444           71 HTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        71 ~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |+++....    ..+++..+++.|+.++.++++.+.+..+ ..++|++||.... ++..              ....|+.
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~~Y~~  152 (238)
T PRK05786         87 VTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP--------------DQLSYAV  152 (238)
T ss_pred             EcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC--------------CchHHHH
Confidence            99985321    1133456789999999999998877532 2579999886542 1111              1245999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                      +|.+.+.+.+.+.    ..+++++++||++++++
T Consensus       153 sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~  186 (238)
T PRK05786        153 AKAGLAKAVEILASELLGRGIRVNGIAPTTISGD  186 (238)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCC
Confidence            9997766655543    45899999999999986

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.84  E-value=9.1e-20  Score=140.41  Aligned_cols=161  Identities=16%  Similarity=0.098  Sum_probs=115.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh---cCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~vi~~a~~   75 (209)
                      |+++||||+|+||++++++|+++|  ..|....|+....  . ...++.++++|++|.+++.++.   .++|+||||||.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~-~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F-QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c-ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            899999999999999999999985  5666666654321  1 1236889999999998876654   478999999997


Q ss_pred             CCCC------------CCCccchhhhHHHHHHHHHHHHHhcCC---ccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           76 VEPW------------LPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        76 ~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ....            .+.+.+.+++|+.++..+++.+.+.+.   ..+++++||...  ......     .    ..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~~~~~-----~----~~~~  146 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SISDNR-----L----GGWY  146 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--ccccCC-----C----CCcc
Confidence            5211            012346789999999999999887542   257888887432  111000     0    1124


Q ss_pred             hHHHHHHHHHHHHHHHh----h--cCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAA----S--EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~--~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|+..+.+.+.++    +  .+++++.+.||++.++.
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~  187 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTAL  187 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCC
Confidence            59999997777666654    2  37899999999998874

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=3.3e-20  Score=144.81  Aligned_cols=160  Identities=18%  Similarity=0.136  Sum_probs=116.9

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCC-----------CCC----CCC-CCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSD-----------ISG----LPS-EGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~-----------~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      +++||||+|  +||++++++|+++|++|++.+|....           ...    +.. ..++.++++|++|.+++.+++
T Consensus         8 ~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~   87 (256)
T PRK12859          8 VAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELL   87 (256)
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            699999995  89999999999999999987643110           000    000 125778899999999987776


Q ss_pred             c-------CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCcccc
Q 028444           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIA  127 (209)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~  127 (209)
                      +       ++|+|||+||....      ..+++++.+++|+.++..+.+++.+.+   ..++||++||.....+..    
T Consensus        88 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  163 (256)
T PRK12859         88 NKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV----  163 (256)
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC----
Confidence            4       47999999996422      223456679999999999987776543   235899999976543221    


Q ss_pred             CCCccccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                                .+..|+.+|.+.+.+.+.++    +++++++.++||.+.++.
T Consensus       164 ----------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        164 ----------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW  205 (256)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence                      12459999997777655543    468999999999998863

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=1.9e-20  Score=145.28  Aligned_cols=160  Identities=18%  Similarity=0.155  Sum_probs=116.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC--CCceEEEEccCC--CHHHHHHHh-------cC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVT--DYRSLVDAC-------FG   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~Dl~--~~~~~~~~~-------~~   65 (209)
                      ++++||||+|+||.+++++|++.|++|++++|+.++.+.+    ..  ..++.++.+|++  +.+++.+++       .+
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999999999999976432211    11  125677888886  555444333       36


Q ss_pred             cCEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccc
Q 028444           66 CHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        66 ~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      +|+|||+|+....       ..+++.+.+++|+.++.++++++.+.   .+.++||++||...+.+...           
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-----------  161 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN-----------  161 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC-----------
Confidence            8999999986422       12345678999999999999988642   23568999999755432211           


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                         ...|+.+|.+.+.+.+.+.    ..+++++.++|+.+.++
T Consensus       162 ---~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~  201 (247)
T PRK08945        162 ---WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA  201 (247)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence               1359999998888777654    34799999999999665

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.84  E-value=3e-20  Score=147.80  Aligned_cols=160  Identities=11%  Similarity=0.100  Sum_probs=112.2

Q ss_pred             EEEEEcC--CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------------CCC----ceEEEEccC--CCHH--
Q 028444            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------------SEG----ALELVYGDV--TDYR--   57 (209)
Q Consensus         2 ~ilItG~--~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------------~~~----~~~~~~~Dl--~~~~--   57 (209)
                      +++||||  +++||++++++|+++|++|++ .|+.++++.+.              ...    ....+.+|+  ++.+  
T Consensus        11 ~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   89 (303)
T PLN02730         11 RAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDV   89 (303)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccC
Confidence            6999999  799999999999999999988 55433221110              001    135678888  3222  


Q ss_pred             ----------------HHHHHhc-------CcCEEEEcCccC----CC----CCCCccchhhhHHHHHHHHHHHHHhcCC
Q 028444           58 ----------------SLVDACF-------GCHVIFHTAALV----EP----WLPDPSRFFAVNVEGLKNVVQAAKETKT  106 (209)
Q Consensus        58 ----------------~~~~~~~-------~~d~vi~~a~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~  106 (209)
                                      ++..+++       ++|++|||||..    .+    ..+++++++++|+.++..+++++.+.+.
T Consensus        90 ~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~  169 (303)
T PLN02730         90 PEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMN  169 (303)
T ss_pred             chhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            5544442       589999999742    12    2346778899999999999999988652


Q ss_pred             -ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH----HHHhh-cCCCEEEEecCceecCC
Q 028444          107 -VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA----LQAAS-EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       107 -~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~-~~~~~~~~rp~~v~g~~  175 (209)
                       ..++|++||.......+..             +..|+.+|++.+.+.    .++.+ +|++++.+.||++.++.
T Consensus       170 ~~G~II~isS~a~~~~~p~~-------------~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~  231 (303)
T PLN02730        170 PGGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA  231 (303)
T ss_pred             cCCEEEEEechhhcCCCCCC-------------chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence             2689999997654321111             124999999555554    44544 58999999999999874

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.83  E-value=1.4e-19  Score=132.78  Aligned_cols=156  Identities=22%  Similarity=0.290  Sum_probs=119.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      +++||||+|+||++++++|.++|+ .|+++.|++.......        ...++.++.+|+++++.+.+++.       .
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGP   81 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999996 6888888755432110        11357789999999988877654       3


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +|+|||+|+....      ..+++.+.+++|+.++.++++++++. +.+++|++||...+-+...              .
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~~~~~~~~--------------~  146 (180)
T smart00822       82 LRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVAGVLGNPG--------------Q  146 (180)
T ss_pred             eeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHHHhcCCCC--------------c
Confidence            6999999996321      22445678999999999999999765 4578999998654322111              1


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCcee
Q 028444          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIY  172 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~  172 (209)
                      ..|+.+|.+.+.+.+.+.+.+++++.+.||.+.
T Consensus       147 ~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 ANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence            459999999999998888889999999988764

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=1.4e-19  Score=143.75  Aligned_cols=172  Identities=20%  Similarity=0.182  Sum_probs=125.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++|||||++||+++++.|+.+|.+|+...|+..+.++.       .....+.++++|+++.+++.++.+       ..|
T Consensus        37 ~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ld  116 (314)
T KOG1208|consen   37 VALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLD  116 (314)
T ss_pred             EEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCcc
Confidence            689999999999999999999999999999987432211       112467889999999999987764       479


Q ss_pred             EEEEcCccCCC----CCCCccchhhhHHHHHHHHHHHHHhcCC---ccEEEEEccceeeccC--CccccCCCcccccccc
Q 028444           68 VIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGST--DGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~ss~~~~~~~--~~~~~~e~~~~~~~~~  138 (209)
                      ++|||||.+..    ..+..+..|.+|..|.+.|++.+.+..+   ..|||++||... +..  ......+....  ...
T Consensus       117 vLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~--~~~  193 (314)
T KOG1208|consen  117 VLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKL--YSS  193 (314)
T ss_pred             EEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccC--ccc
Confidence            99999998533    3345778899999999999998876432   269999999754 211  11111111100  111


Q ss_pred             CChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~~  176 (209)
                      ...|+.||.+...+..++.++   |+.++.+.||.+.+++-
T Consensus       194 ~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  194 DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence            124999999776666666532   89999999999999854

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=4.2e-20  Score=155.17  Aligned_cols=159  Identities=22%  Similarity=0.241  Sum_probs=119.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|.++|++|++++|+...  +..+....+..++++|++|.+++.++++       ++|+||||
T Consensus       212 ~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~  291 (450)
T PRK08261        212 VALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHN  291 (450)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            69999999999999999999999999999885321  1111111245688999999998877664       58999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..++++..+++|+.++.++++++.+.+   ...+||++||...+.+..+              ...|+
T Consensus       292 AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~--------------~~~Y~  357 (450)
T PRK08261        292 AGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG--------------QTNYA  357 (450)
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC--------------ChHHH
Confidence            996432      224566789999999999999997632   2368999999765533221              14599


Q ss_pred             HHHHH----HHHHHHHHhhcCCCEEEEecCceecC
Q 028444          144 RSKAV----ADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       144 ~sK~~----~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      .+|..    .+.+..++.+++++++.+.||.+.++
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~  392 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQ  392 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcch
Confidence            99994    44455555566899999999999775

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.82  E-value=3.4e-19  Score=146.38  Aligned_cols=183  Identities=19%  Similarity=0.145  Sum_probs=123.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      ++++||||+|+||++++++|+++|++|++++|++++.....  ....+..+.+|++|++++.+.+.++|++|||||....
T Consensus       179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~  258 (406)
T PRK07424        179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGINVH  258 (406)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCC
Confidence            36999999999999999999999999999998765432111  1124678899999999999999999999999996422


Q ss_pred             ---CCCCccchhhhHHHHHHHHHHHHHhcCC-------ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKT-------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~-------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                         ..+++++++++|+.++.++++++.+.+.       ...+|++|+.. ..+    +           ....|++||++
T Consensus       259 ~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~~----~-----------~~~~Y~ASKaA  322 (406)
T PRK07424        259 GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VNP----A-----------FSPLYELSKRA  322 (406)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-ccC----C-----------CchHHHHHHHH
Confidence               2235667899999999999999876421       12355665422 110    0           01349999998


Q ss_pred             HHHHHHHHh-hcCCCEEEEecCceecCCCC---CcchhHHHHHHHHhcCCceEEE
Q 028444          149 ADKIALQAA-SEGLPIVPVYPGVIYGPGKL---TTGNLVAKLVRLLFSQHFSLVF  199 (209)
Q Consensus       149 ~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~  199 (209)
                      .+.+..... ..++.+..+.||.+.++...   ..++.+++.+......+....+
T Consensus       323 l~~l~~l~~~~~~~~I~~i~~gp~~t~~~~~~~~spe~vA~~il~~i~~~~~~i~  377 (406)
T PRK07424        323 LGDLVTLRRLDAPCVVRKLILGPFKSNLNPIGVMSADWVAKQILKLAKRDFRNII  377 (406)
T ss_pred             HHHHHHHHHhCCCCceEEEEeCCCcCCCCcCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence            877653222 24566777778777654321   1234455554444444434333

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.82  E-value=4.3e-22  Score=154.11  Aligned_cols=187  Identities=24%  Similarity=0.206  Sum_probs=129.7

Q ss_pred             cCC--ChhHHHHHHHHHhCCCeEEEEEcCCCCC----CCCCCCCceEEEEccCCCHHHHHHHh--------cCcCEEEEc
Q 028444            7 GAS--GYLGGRLCHALLKQGHSVRALVRRTSDI----SGLPSEGALELVYGDVTDYRSLVDAC--------FGCHVIFHT   72 (209)
Q Consensus         7 G~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~~d~vi~~   72 (209)
                      |++  ++||++++++|+++|++|++++|+.++.    +++..+.+..++++|+++++++..++        .++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  9999999999999999999999987652    22222224557999999999887764        468999999


Q ss_pred             CccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           73 AALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        73 a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ++...+          ..+++.+.+++|+.++..+++++.+.+. ..++|++||.......+++              ..
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~--------------~~  146 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY--------------SA  146 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT--------------HH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc--------------hh
Confidence            997432          1134567899999999999999977532 2579999987554332222              34


Q ss_pred             HHHHHH----HHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          142 YERSKA----VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~----~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+.+|.    +++.++.++++ +|+++++|.||.+.++.... .....++........+...+..++|+|++
T Consensus       147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~~~~~~~~~~~~~~pl~r~~~~~evA~~  217 (241)
T PF13561_consen  147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IPGNEEFLEELKKRIPLGRLGTPEEVANA  217 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HHTHHHHHHHHHHHSTTSSHBEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-cccccchhhhhhhhhccCCCcCHHHHHHH
Confidence            999999    45556666778 89999999999999874210 01123333333333333344556666654

...

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.82  E-value=3.3e-19  Score=135.81  Aligned_cols=171  Identities=23%  Similarity=0.198  Sum_probs=133.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-------CCC--CCCceEEEEccCCCHHHHHHHhc--CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLP--SEGALELVYGDVTDYRSLVDACF--GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-------~~~--~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   70 (209)
                      ++||||-||+-|++|++.|+++||+|.++.|......       ...  ...++.++.+|++|...+.++++  ++|-|+
T Consensus         4 ~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIY   83 (345)
T COG1089           4 VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIY   83 (345)
T ss_pred             eEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchhhe
Confidence            6899999999999999999999999999998643211       111  11458899999999999999887  589999


Q ss_pred             EcCccC--CCCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           71 HTAALV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        71 ~~a~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      |+|+.+  ..+.++|....+++..|+.+|+|+++-.+. ..+|.+.||+..||.....|.+|.++..   |.+||+.+|.
T Consensus        84 NLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFy---PrSPYAvAKl  160 (345)
T COG1089          84 NLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFY---PRSPYAVAKL  160 (345)
T ss_pred             eccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCC---CCCHHHHHHH
Confidence            999974  557788999999999999999999998753 3589999999999988777777766543   4588999999


Q ss_pred             HHHHHHHHHh-hcCCCEEEEecCceecCC
Q 028444          148 VADKIALQAA-SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       148 ~~e~~~~~~~-~~~~~~~~~rp~~v~g~~  175 (209)
                      .+-=....|. .+|+-.+.=..++--+|.
T Consensus       161 Ya~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         161 YAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             HHHheeeehHhhcCceeecceeecCCCCC
Confidence            7775555554 457654443333333453

>PLN00015 protochlorophyllide reductase

Probab=99.82  E-value=4.9e-20  Score=147.56  Aligned_cols=171  Identities=19%  Similarity=0.123  Sum_probs=117.7

Q ss_pred             EEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            4 LVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         4 lItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +||||+++||++++++|+++| ++|++.+|+.++...    +. ...++.++++|++|.+++.++++       ++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999997653321    11 11357888999999999877663       479999


Q ss_pred             EcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---C--ccEEEEEccceeeccCC-c--cc---cC----
Q 028444           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--VEKIIYTSSFFALGSTD-G--YI---AD----  128 (209)
Q Consensus        71 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~~i~~ss~~~~~~~~-~--~~---~~----  128 (209)
                      ||||...+       ..+++++.+++|+.++..+++.+.+.+   +  .++||++||...+.+.. .  .+   ..    
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99997422       123456789999999999998887642   1  36899999976542110 0  00   00    


Q ss_pred             -------CCcc----ccccccCChHHHHHHHHHHHHHHH----hh-cCCCEEEEecCcee-cC
Q 028444          129 -------ENQV----HEEKYFCTQYERSKAVADKIALQA----AS-EGLPIVPVYPGVIY-GP  174 (209)
Q Consensus       129 -------e~~~----~~~~~~~~~Y~~sK~~~e~~~~~~----~~-~~~~~~~~rp~~v~-g~  174 (209)
                             +...    ......+..|+.||.+...+.+.+    .+ .|+++++++||++. ++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  223 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTG  223 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcc
Confidence                   0000    001112356999999744444443    32 48999999999994 44

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.81  E-value=2e-21  Score=138.02  Aligned_cols=160  Identities=24%  Similarity=0.299  Sum_probs=125.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhcC---cCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~---~d~vi~~a~~~   76 (209)
                      .+++||+.-+||+++++.|++.|.+|+.+.|+++.+..+-.+  .-++.+++|+++.+.+.+++..   +|.++||||..
T Consensus         9 ~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAgvA   88 (245)
T KOG1207|consen    9 IVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAGVA   88 (245)
T ss_pred             EEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccchhh
Confidence            489999999999999999999999999999998765543222  2388999999998888888764   79999999962


Q ss_pred             --CC----CCCCccchhhhHHHHHHHHHHHHHh----cCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           77 --EP----WLPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        77 --~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                        .+    ..+++++.|++|+.+..++.+...+    ....+.++++||.....+....              +.|+++|
T Consensus        89 ~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nH--------------tvYcatK  154 (245)
T KOG1207|consen   89 TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNH--------------TVYCATK  154 (245)
T ss_pred             hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCc--------------eEEeecH
Confidence              22    4467888999999999999988543    3344579999998765444333              4599999


Q ss_pred             HHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          147 AVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       147 ~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ++.+++.+.    +.++.++++.+.|..+++..
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~M  187 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDM  187 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecc
Confidence            966665544    44567999999999999764

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.79  E-value=2e-19  Score=142.47  Aligned_cols=166  Identities=13%  Similarity=0.075  Sum_probs=114.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh------cC-cCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC------FG-CHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------~~-~d~vi~~a~   74 (209)
                      +|+||||||+||++++++|+++|++|++++|++.+...    .+++.+.+|+.|++.+..++      ++ +|.|+|+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            58999999999999999999999999999998765422    26778889999999999988      57 999999987


Q ss_pred             cCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHH
Q 028444           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL  154 (209)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (209)
                      ...    +       ......++++++++. ++++||++||..++...   .                  .+...+++++
T Consensus        77 ~~~----~-------~~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~---~------------------~~~~~~~~l~  123 (285)
T TIGR03649        77 PIP----D-------LAPPMIKFIDFARSK-GVRRFVLLSASIIEKGG---P------------------AMGQVHAHLD  123 (285)
T ss_pred             CCC----C-------hhHHHHHHHHHHHHc-CCCEEEEeeccccCCCC---c------------------hHHHHHHHHH
Confidence            321    1       123456889999988 58999999986543210   0                  1112233222


Q ss_pred             HHhhcCCCEEEEecCceecCCCCCcchhHHHHHH----HHhcCCceEEEEEEeeeeec
Q 028444          155 QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVR----LLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       155 ~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~dva~~  208 (209)
                      .  ..+++++++||+++|......  .....+..    ....++....|++++|+|++
T Consensus       124 ~--~~gi~~tilRp~~f~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~  177 (285)
T TIGR03649       124 S--LGGVEYTVLRPTWFMENFSEE--FHVEAIRKENKIYSATGDGKIPFVSADDIARV  177 (285)
T ss_pred             h--ccCCCEEEEeccHHhhhhccc--ccccccccCCeEEecCCCCccCcccHHHHHHH
Confidence            1  138999999999998643110  00010000    01135566778999999875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.79  E-value=1.5e-19  Score=132.49  Aligned_cols=159  Identities=21%  Similarity=0.224  Sum_probs=126.4

Q ss_pred             EEEEEcCC-ChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--------CcCEEEEc
Q 028444            2 KILVSGAS-GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~-G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~~d~vi~~   72 (209)
                      +|+|||++ |+||.++++.|.++|+.|++..|+.++...+....++...+.|+++++++.+...        ..|+++||
T Consensus         9 ~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NN   88 (289)
T KOG1209|consen    9 KVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNN   88 (289)
T ss_pred             eEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcC
Confidence            68898875 6899999999999999999999998877776655689999999999999877653        37999999


Q ss_pred             CccC--CC----CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           73 AALV--EP----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        73 a~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      ||..  .|    ...+.++.|++|+.|..++++++....  .++.||+++|..+|-+.+.              .+.|.+
T Consensus        89 AG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf--------------~~iYsA  154 (289)
T KOG1209|consen   89 AGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF--------------GSIYSA  154 (289)
T ss_pred             CCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch--------------hhhhhH
Confidence            9963  22    223456789999999999999887432  3468999999988865432              255999


Q ss_pred             HHHHHHHHHHH----HhhcCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQ----AASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~  174 (209)
                      ||++...+...    +.+.|++++.+-+|-+-+.
T Consensus       155 sKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  155 SKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             HHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence            99976666554    4567999999999998774

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.79  E-value=2.7e-18  Score=133.02  Aligned_cols=160  Identities=21%  Similarity=0.205  Sum_probs=121.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC---CCCceEEEEccCCCHHHHHHHhc---------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACF---------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~---------~~d~v   69 (209)
                      -|+|||+-.+.|+.+|++|.++|+.|++-+-.+...+.+.   ..++...++.|++++++++++.+         +.-.|
T Consensus        31 ~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwgl  110 (322)
T KOG1610|consen   31 AVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGL  110 (322)
T ss_pred             EEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeE
Confidence            3899999999999999999999999999886554433322   13578888999999999988774         34589


Q ss_pred             EEcCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||+..   +    ..+++.+++++|+.|+.++++++.+.-  ..+|+|++||..+--+.+  .            ..
T Consensus       111 VNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p--~------------~g  176 (322)
T KOG1610|consen  111 VNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP--A------------LG  176 (322)
T ss_pred             EeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc--c------------cc
Confidence            99999642   2    124667889999999999999997753  246999999976421111  1            25


Q ss_pred             hHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      +|+.||.+.|    .+.+|+...|++|.++-||.+-++-
T Consensus       177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l  215 (322)
T KOG1610|consen  177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNL  215 (322)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence            6999999555    4556666789999999999766653

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.79  E-value=9e-20  Score=133.20  Aligned_cols=143  Identities=22%  Similarity=0.273  Sum_probs=110.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcC--CCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRR--TSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~--~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      ++++||||++.||++++++|+++| +.|+++.|+  .+..+.+    . ...++.++++|+++.+++..+++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            369999999999999999999995 578888887  2221111    1 11478999999999999877764       5


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +|++|||||....      ..+++.+++++|+.++..+.+++.+. +.+++|++||.....+.+..              
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~--------------  145 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNISSIAGVRGSPGM--------------  145 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEEEGGGTSSSTTB--------------
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEecchhhccCCCCC--------------
Confidence            8999999997532      12345678999999999999999984 46789999998766443322              


Q ss_pred             ChHHHHHHHHHHHHHHHhh
Q 028444          140 TQYERSKAVADKIALQAAS  158 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~  158 (209)
                      ..|+.+|++.+.+.+.+++
T Consensus       146 ~~Y~askaal~~~~~~la~  164 (167)
T PF00106_consen  146 SAYSASKAALRGLTQSLAA  164 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH
Confidence            3499999998888887764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.79  E-value=2.1e-18  Score=133.98  Aligned_cols=162  Identities=28%  Similarity=0.315  Sum_probs=119.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC--CCCC--CC----CceEEEEccCCC-HHHHHHHhc-------
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLP--SE----GALELVYGDVTD-YRSLVDACF-------   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~--~~----~~~~~~~~Dl~~-~~~~~~~~~-------   64 (209)
                      |+++||||+++||++++++|+++|++|+++.|+....  +...  ..    ..+.+..+|+++ .+++..+++       
T Consensus         6 ~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g   85 (251)
T COG1028           6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFG   85 (251)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            3699999999999999999999999999988875431  1110  00    157778899998 887766553       


Q ss_pred             CcCEEEEcCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccc
Q 028444           65 GCHVIFHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        65 ~~d~vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ++|++|||||...   +    ..+++++.+++|+.++..+.+.+.+....+++|++||.... .....            
T Consensus        86 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~------------  152 (251)
T COG1028          86 RIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG------------  152 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC------------
Confidence            4899999999742   2    22456788999999999999966655433389999998765 33221            


Q ss_pred             cCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                       ...|+.||++...+    ..++.+.|++++.+.||.+.++..
T Consensus       153 -~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~  194 (251)
T COG1028         153 -QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMT  194 (251)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcch
Confidence             14599999955544    444455689999999998777643

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.78  E-value=7.7e-19  Score=129.93  Aligned_cols=157  Identities=24%  Similarity=0.242  Sum_probs=118.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC------CCCCCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++|||.|+||++++++|+++|..+.++..+.+..+      ...+...+.|+++|+++..+++++++       .+|+
T Consensus         7 na~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDI   86 (261)
T KOG4169|consen    7 NALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDI   86 (261)
T ss_pred             eEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEE
Confidence            6899999999999999999999988877766544322      22223579999999999999888875       4799


Q ss_pred             EEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC-----C-ccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-----T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      +||+||...  +.++++.+.+|+.|..+=.....+.+     + .+-+|+.||.....+.+-.|              .|
T Consensus        87 lINgAGi~~--dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~p--------------VY  150 (261)
T KOG4169|consen   87 LINGAGILD--DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFP--------------VY  150 (261)
T ss_pred             EEccccccc--chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccch--------------hh
Confidence            999999875  46789999999887666555554432     2 23589999976554443333              39


Q ss_pred             HHHHH----HHHHHHHH--HhhcCCCEEEEecCceecC
Q 028444          143 ERSKA----VADKIALQ--AASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~----~~e~~~~~--~~~~~~~~~~~rp~~v~g~  174 (209)
                      ++||+    ++.+++..  |.+.|++++.+.||.+.+.
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~  188 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD  188 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH
Confidence            99999    55665544  3467999999999998753

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.77  E-value=2.4e-18  Score=127.27  Aligned_cols=164  Identities=21%  Similarity=0.207  Sum_probs=116.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEE-cCCCC-CCCCC----CCCceEEEEccCCCHHHHHHHhc---------C
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALV-RRTSD-ISGLP----SEGALELVYGDVTDYRSLVDACF---------G   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~-r~~~~-~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~---------~   65 (209)
                      .++||||+++||..|+++|++. |.++++.. |+++. ..++.    .+.++++++.|+++.+++.++++         +
T Consensus         5 sv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~G   84 (249)
T KOG1611|consen    5 SVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDG   84 (249)
T ss_pred             cEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCC
Confidence            5999999999999999999865 56665554 44554 22221    23689999999999988877653         5


Q ss_pred             cCEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---C-----------ccEEEEEccceeeccCCc
Q 028444           66 CHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-----------VEKIIYTSSFFALGSTDG  124 (209)
Q Consensus        66 ~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-----------~~~~i~~ss~~~~~~~~~  124 (209)
                      .|++|+|||...+       +...+.+.+++|..++..+.+++.+..   .           ...+|++||...=  ..+
T Consensus        85 lnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s--~~~  162 (249)
T KOG1611|consen   85 LNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS--IGG  162 (249)
T ss_pred             ceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--cCC
Confidence            7899999997433       222356789999999999999886531   1           1258999886432  111


Q ss_pred             cccCCCccccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          125 YIADENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       125 ~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      .         ...+..+|..||.+...+.+.    +.+.++-++.++||||-++..
T Consensus       163 ~---------~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg  209 (249)
T KOG1611|consen  163 F---------RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG  209 (249)
T ss_pred             C---------CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC
Confidence            0         011236799999966555554    445688899999999998743

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.76  E-value=2.5e-18  Score=133.09  Aligned_cols=159  Identities=19%  Similarity=0.209  Sum_probs=122.4

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CceEEEEccCCCHHH----HHHHhcCc--CEEE
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDYRS----LVDACFGC--HVIF   70 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~Dl~~~~~----~~~~~~~~--d~vi   70 (209)
                      ++|||||.+||++.+++|+++|++|++++|+.++++.+.++      -.+.++..|.++.++    +.+.+.+.  -++|
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILV  131 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILV  131 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEEE
Confidence            68999999999999999999999999999998887654332      357888999997665    55555554  4899


Q ss_pred             EcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           71 HTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        71 ~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||+|.+..        +....++.+.+|+.++..+.+.+.+.+   +.+-+|++||.....+.+.              +
T Consensus       132 NNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~--------------~  197 (312)
T KOG1014|consen  132 NNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPL--------------L  197 (312)
T ss_pred             ecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChh--------------H
Confidence            99997532        112345678999999999999998765   2345999999876543322              3


Q ss_pred             ChHHHHHHH----HHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~----~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.|+++|..    ++.+..|+..+|+.+-.+-|..|-++.
T Consensus       198 s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  198 SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            569999994    555566667789999999999998763

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=5.5e-17  Score=129.05  Aligned_cols=161  Identities=11%  Similarity=0.109  Sum_probs=105.9

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCC-----------CCCCCC--CCC-C-----ceEEEEccCCCHH---
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRT-----------SDISGL--PSE-G-----ALELVYGDVTDYR---   57 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~-----------~~~~~~--~~~-~-----~~~~~~~Dl~~~~---   57 (209)
                      +++||||+  .+||+++++.|+++|++|++.++.+           .+....  ... .     ++..+..|+++.+   
T Consensus        10 ~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~   89 (299)
T PRK06300         10 IAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVP   89 (299)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEee
Confidence            58999995  8999999999999999999976531           000000  000 0     0111223333332   


Q ss_pred             ---------------HHHHHh-------cCcCEEEEcCccCC----C----CCCCccchhhhHHHHHHHHHHHHHhcCC-
Q 028444           58 ---------------SLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (209)
Q Consensus        58 ---------------~~~~~~-------~~~d~vi~~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (209)
                                     ++..++       .++|++|||||...    +    ..+++++.+++|+.++.++++++.+.+. 
T Consensus        90 ~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~  169 (299)
T PRK06300         90 EEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP  169 (299)
T ss_pred             cccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence                           233333       35899999997521    1    2245778899999999999999988753 


Q ss_pred             ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH----HHHHHhh-cCCCEEEEecCceecCC
Q 028444          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK----IALQAAS-EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       107 ~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~----~~~~~~~-~~~~~~~~rp~~v~g~~  175 (209)
                      ..++|++||.......+...             ..|+.+|+..+.    +..++.+ +|++++.+.||.+.++.
T Consensus       170 ~G~ii~iss~~~~~~~p~~~-------------~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~  230 (299)
T PRK06300        170 GGSTISLTYLASMRAVPGYG-------------GGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRA  230 (299)
T ss_pred             CCeEEEEeehhhcCcCCCcc-------------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChh
Confidence            25799998865542221110             249999995554    4555554 48999999999998874

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.74  E-value=1.2e-17  Score=129.38  Aligned_cols=152  Identities=18%  Similarity=0.170  Sum_probs=112.0

Q ss_pred             HHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc----CcCEEEEcCccCCCCCCCccchhhhHH
Q 028444           16 LCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALVEPWLPDPSRFFAVNV   91 (209)
Q Consensus        16 l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~~n~   91 (209)
                      ++++|+++|++|++++|+..+..      ..+++++|++|.+++.++++    ++|+||||||...  ..++++.+++|+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~--~~~~~~~~~vN~   72 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG--TAPVELVARVNF   72 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC--CCCHHHhhhhch
Confidence            47899999999999999865431      24578999999999988775    5899999999753  346778999999


Q ss_pred             HHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCC---------c--c--ccccccCChHHHHHHHHHHHHHHH-
Q 028444           92 EGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADEN---------Q--V--HEEKYFCTQYERSKAVADKIALQA-  156 (209)
Q Consensus        92 ~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~---------~--~--~~~~~~~~~Y~~sK~~~e~~~~~~-  156 (209)
                      .++..+++.+.+.+ ..++||++||...|+.....+..+.         .  +  ..+......|+.+|.+.+.+.+.+ 
T Consensus        73 ~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  152 (241)
T PRK12428         73 LGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQA  152 (241)
T ss_pred             HHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHH
Confidence            99999999998753 2368999999988753221111000         0  0  011223467999999777665544 


Q ss_pred             ----hhcCCCEEEEecCceecCC
Q 028444          157 ----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       157 ----~~~~~~~~~~rp~~v~g~~  175 (209)
                          .++|+++++++||++.++.
T Consensus       153 ~~e~~~~girvn~v~PG~v~T~~  175 (241)
T PRK12428        153 QPWFGARGIRVNCVAPGPVFTPI  175 (241)
T ss_pred             HHhhhccCeEEEEeecCCccCcc
Confidence                4468999999999999984

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.74  E-value=2.6e-16  Score=112.96  Aligned_cols=161  Identities=23%  Similarity=0.341  Sum_probs=119.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |||.|+||||.+|+.|++...++|++|+++.|++.+....   +++.+++.|+.|.+++.+.+.+.|+||..-+...   
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~---   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA---   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCC---
Confidence            8999999999999999999999999999999998876544   3788999999999999999999999998766422   


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec-cCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~-~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                      .+..   .........|++.++.. +..|++.++...... .......+...++.     .-|..++..+|.+-..-.+.
T Consensus        75 ~~~~---~~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g~rLvD~p~fP~-----ey~~~A~~~ae~L~~Lr~~~  145 (211)
T COG2910          75 SDND---ELHSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEGTRLVDTPDFPA-----EYKPEALAQAEFLDSLRAEK  145 (211)
T ss_pred             CChh---HHHHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCCceeecCCCCch-----hHHHHHHHHHHHHHHHhhcc
Confidence            1211   23344577788888876 578999888765532 22222222221111     22567777777665544455


Q ss_pred             CCCEEEEecCceecCCC
Q 028444          160 GLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~  176 (209)
                      .++|+.+.|+.++-|+.
T Consensus       146 ~l~WTfvSPaa~f~PGe  162 (211)
T COG2910         146 SLDWTFVSPAAFFEPGE  162 (211)
T ss_pred             CcceEEeCcHHhcCCcc
Confidence            69999999999998865

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.73  E-value=2e-17  Score=128.07  Aligned_cols=160  Identities=26%  Similarity=0.320  Sum_probs=123.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-------CceEEEEccCCCHHHHHHHhcC-------cC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTDYRSLVDACFG-------CH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~-------~d   67 (209)
                      +|+||||+.+||.+++..+..+|..|+++.|+.+++.++.++       ..+.+..+|+.|.+++...+++       +|
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d  114 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPID  114 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcc
Confidence            689999999999999999999999999999998765543322       2366999999999998887753       69


Q ss_pred             EEEEcCccC------CCCCCCccchhhhHHHHHHHHHHHHHhcCC----ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      .+|||||..      +.+.+..+..+++|..++.+++++..+.++    ..+|+.+||..+--+..++            
T Consensus       115 ~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy------------  182 (331)
T KOG1210|consen  115 NLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY------------  182 (331)
T ss_pred             eEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc------------
Confidence            999999963      122344567899999999999998876543    2378888886543222222            


Q ss_pred             cCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                        ++|+.+|.    +++.+.+|.-++++.+....|+.+.+|+
T Consensus       183 --saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpG  222 (331)
T KOG1210|consen  183 --SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPG  222 (331)
T ss_pred             --cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence              33655555    7777777777789999999999999884

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.72  E-value=1.6e-16  Score=130.55  Aligned_cols=172  Identities=25%  Similarity=0.348  Sum_probs=124.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEEEcCCCCCCC---CC-----------------CCCceEEEEccCCCH-
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISG---LP-----------------SEGALELVYGDVTDY-   56 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~~r~~~~~~~---~~-----------------~~~~~~~~~~Dl~~~-   56 (209)
                      ++|+|||||||+|+-+.+.|++.-   -+++++.|.++....   +.                 ...++..+.||++++ 
T Consensus        13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~   92 (467)
T KOG1221|consen   13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD   92 (467)
T ss_pred             CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence            369999999999999999998764   478888887653210   00                 115788899999874 


Q ss_pred             -----HHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCc
Q 028444           57 -----RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        57 -----~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                           .+...+.+++|+|||+|+.++.. +..+....+|..|+.++++.+++..+.+-++|+|++.+. ...+. .+|..
T Consensus        93 LGis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~-i~E~~  169 (467)
T KOG1221|consen   93 LGISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGH-IEEKP  169 (467)
T ss_pred             cCCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-ccccc-ccccc
Confidence                 34455667899999999965442 344557889999999999999998777889999997765 21111 11111


Q ss_pred             ccc----------------------------ccccCChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          132 VHE----------------------------EKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       132 ~~~----------------------------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      .+.                            ...+++.|..+|+++|+++...+ .+++++++||+.+...-.
T Consensus       170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-~~lPivIiRPsiI~st~~  241 (467)
T KOG1221|consen  170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-ENLPLVIIRPSIITSTYK  241 (467)
T ss_pred             cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-cCCCeEEEcCCceecccc
Confidence            000                            11135679999999999988754 579999999999987643

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.70  E-value=7.2e-18  Score=119.90  Aligned_cols=160  Identities=28%  Similarity=0.300  Sum_probs=124.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      .+||||.+++|++.+++|.+.|.+|.+++-...+-.+..++  .++.|...|+++++++..++.       +.|+.+|||
T Consensus        12 alvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vnca   91 (260)
T KOG1199|consen   12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCA   91 (260)
T ss_pred             EEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeecc
Confidence            68999999999999999999999999998755443332222  478999999999999988774       579999999


Q ss_pred             ccC------------CCCCCCccchhhhHHHHHHHHHHHHHhcCC---------ccEEEEEccceeeccCCccccCCCcc
Q 028444           74 ALV------------EPWLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        74 ~~~------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                      |+.            ....+++++.+++|+.+++++++.....++         ..-+|++.|...+....+.       
T Consensus        92 gia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq-------  164 (260)
T KOG1199|consen   92 GIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ-------  164 (260)
T ss_pred             ceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch-------
Confidence            962            112346778899999999999886654321         1248888888888665544       


Q ss_pred             ccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                             ..|++||.    ++--+++.++..|++++.+.||.+.+|-.
T Consensus       165 -------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpll  205 (260)
T KOG1199|consen  165 -------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLL  205 (260)
T ss_pred             -------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhh
Confidence                   34999998    55566777777899999999999998843

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.69  E-value=6.5e-16  Score=121.35  Aligned_cols=148  Identities=31%  Similarity=0.457  Sum_probs=114.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+||||||++|++++++|+++|++|.+..|++++.....  .++++..+|+.+.+.+..++++.|.++++.+... +.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~   77 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS   77 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence            79999999999999999999999999999999988766655  5899999999999999999999999999988644 22


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                      .   ...........+..+.+. . +.++++++|........                ...|..+|..+|..+..   .|
T Consensus        78 ~---~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~~~----------------~~~~~~~~~~~e~~l~~---sg  133 (275)
T COG0702          78 D---AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADAAS----------------PSALARAKAAVEAALRS---SG  133 (275)
T ss_pred             c---chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCCCC----------------ccHHHHHHHHHHHHHHh---cC
Confidence            2   233444555555555555 2 35678888876543211                14599999999988765   68


Q ss_pred             CCEEEEecCceecCC
Q 028444          161 LPIVPVYPGVIYGPG  175 (209)
Q Consensus       161 ~~~~~~rp~~v~g~~  175 (209)
                      ++.+.+||..+|...
T Consensus       134 ~~~t~lr~~~~~~~~  148 (275)
T COG0702         134 IPYTTLRRAAFYLGA  148 (275)
T ss_pred             CCeEEEecCeeeecc
Confidence            898999977776653

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.67  E-value=8.1e-16  Score=147.99  Aligned_cols=159  Identities=20%  Similarity=0.189  Sum_probs=122.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCC----------------------------------CC-------
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDI----------------------------------SG-------   39 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~----------------------------------~~-------   39 (209)
                      ++|||||+++||.+++++|+++ |++|++++|+....                                  +.       
T Consensus      1999 vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~ 2078 (2582)
T TIGR02813      1999 VFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLS 2078 (2582)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccch
Confidence            6899999999999999999988 69999999982100                                  00       


Q ss_pred             ----------CCC-CCceEEEEccCCCHHHHHHHhc------CcCEEEEcCccCCC------CCCCccchhhhHHHHHHH
Q 028444           40 ----------LPS-EGALELVYGDVTDYRSLVDACF------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKN   96 (209)
Q Consensus        40 ----------~~~-~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~   96 (209)
                                +.. ..++.++.+|++|.+++.+++.      ++|+||||||....      ..+++++.+++|+.|+.+
T Consensus      2079 ~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~ 2158 (2582)
T TIGR02813      2079 SLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLS 2158 (2582)
T ss_pred             hHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHH
Confidence                      000 1357889999999999877764      48999999997422      334677889999999999


Q ss_pred             HHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc--CCCEEEEecCceecC
Q 028444           97 VVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYGP  174 (209)
Q Consensus        97 l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~rp~~v~g~  174 (209)
                      +++++.+.+ .++||++||..++.+..+.              ..|+.+|...+.+.+.++..  +++++++.||.+.|+
T Consensus      2159 Ll~al~~~~-~~~IV~~SSvag~~G~~gq--------------s~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2159 LLAALNAEN-IKLLALFSSAAGFYGNTGQ--------------SDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHhC-CCeEEEEechhhcCCCCCc--------------HHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            999998763 4689999997664333222              34999999888888777643  589999999999876


Q ss_pred             C
Q 028444          175 G  175 (209)
Q Consensus       175 ~  175 (209)
                      .
T Consensus      2224 m 2224 (2582)
T TIGR02813      2224 M 2224 (2582)
T ss_pred             c
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.66  E-value=4.9e-16  Score=119.62  Aligned_cols=145  Identities=30%  Similarity=0.377  Sum_probs=102.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+||||.+|+.+++.|++.+++|.++.|+..+  .+.+.. .+++.+.+|+.|.+++.++++++|+|+.+-+...   
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~---   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH---   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC---
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCcch---
Confidence            7999999999999999999999999999998632  222222 3788999999999999999999999998877432   


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                             ...+....++++++++.+ +++||+.|-...+....     ...+.      .+.-..|...|+.+++   .+
T Consensus        77 -------~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~-----~~~p~------~~~~~~k~~ie~~l~~---~~  134 (233)
T PF05368_consen   77 -------PSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESS-----GSEPE------IPHFDQKAEIEEYLRE---SG  134 (233)
T ss_dssp             -------CCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTT-----TSTTH------HHHHHHHHHHHHHHHH---CT
T ss_pred             -------hhhhhhhhhHHHhhhccc-cceEEEEEecccccccc-----ccccc------chhhhhhhhhhhhhhh---cc
Confidence                   223555788999999984 89999754333321100     00000      1233567777766654   49


Q ss_pred             CCEEEEecCceec
Q 028444          161 LPIVPVYPGVIYG  173 (209)
Q Consensus       161 ~~~~~~rp~~v~g  173 (209)
                      ++++++|||+.+.
T Consensus       135 i~~t~i~~g~f~e  147 (233)
T PF05368_consen  135 IPYTIIRPGFFME  147 (233)
T ss_dssp             SEBEEEEE-EEHH
T ss_pred             ccceeccccchhh
Confidence            9999999998764

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.65  E-value=1.2e-15  Score=113.03  Aligned_cols=155  Identities=27%  Similarity=0.319  Sum_probs=109.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCC-CCCCC------CC-CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRT-SDISG------LP-SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~-~~~~~------~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      +++||||+|.||..+++.|+++| .+++++.|+. ...+.      +. ....+.++++|++|++++.+++.       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999998 5899999983 22110      11 11368899999999999988874       3


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ++.|||+|+....      ..++....+..-+.++.+|.+++.+. ....||..||....-+..+.              
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis~~~G~~gq--------------  146 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSISSLLGGPGQ--------------  146 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHHHHTT-TTB--------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChhHhccCcch--------------
Confidence            6899999997422      22334566888899999999999876 47889999997654333222              


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCce
Q 028444          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVI  171 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v  171 (209)
                      ..|+++-...+.+.....+.|.++.++.-+..
T Consensus       147 ~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  147 SAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             HhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence            34999999999998887777889888875543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.48  E-value=1.2e-13  Score=102.62  Aligned_cols=161  Identities=20%  Similarity=0.223  Sum_probs=108.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEE--EcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRAL--VRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~--~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      -+|+||+|.+||..++..+.+++-+....  .|.....+.+.-.  .......+|+++...+..+.+       +-|.||
T Consensus         8 villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI   87 (253)
T KOG1204|consen    8 VILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIII   87 (253)
T ss_pred             EEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEE
Confidence            38999999999999999888887544433  3333222111000  112233445554443333322       368999


Q ss_pred             EcCccCCC---------CCCCccchhhhHHHHHHHHHHHHHhcC-C---ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           71 HTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK-T---VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        71 ~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~---~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||..++         +.++|+++++.|+.++..+...+.+.. +   .+.+|++||..+..+..+             
T Consensus        88 ~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~-------------  154 (253)
T KOG1204|consen   88 HNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS-------------  154 (253)
T ss_pred             ecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH-------------
Confidence            99996432         234578899999999999988776542 1   256999999766543322             


Q ss_pred             cCChHHHHHHHHHHHHHHHh--h-cCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIALQAA--S-EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~--~-~~~~~~~~rp~~v~g~~~  176 (209)
                       |..|+.+|++-+.+.+.++  + .++++..++||.+.++.+
T Consensus       155 -wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq  195 (253)
T KOG1204|consen  155 -WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQ  195 (253)
T ss_pred             -HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhH
Confidence             4569999999999888875  2 378999999999998743

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.47  E-value=2.3e-12  Score=97.05  Aligned_cols=145  Identities=23%  Similarity=0.306  Sum_probs=112.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-----CCCCCCC------CceEEEEccCCCHHHHHHHhc--CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSE------GALELVYGDVTDYRSLVDACF--GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~--~~d~   68 (209)
                      ..||||-||.=|++|++.|+.+||+|.++.|.+..     .+.+...      .....+.+|++|...+.+++.  +++-
T Consensus        30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtE  109 (376)
T KOG1372|consen   30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTE  109 (376)
T ss_pred             EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchh
Confidence            47999999999999999999999999999886543     2222111      357788999999999988886  5778


Q ss_pred             EEEcCccCC--CCCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           69 IFHTAALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        69 vi~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |.|+|+.+.  .+.+-++..-++...|+.+|+++++.+.  ..-+|-..||...||-....|..|.++.   +|.++|++
T Consensus       110 iYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPF---yPRSPYa~  186 (376)
T KOG1372|consen  110 VYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPF---YPRSPYAA  186 (376)
T ss_pred             hhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCC---CCCChhHH
Confidence            999999642  2445566677899999999999998763  2347889999999997666666665433   44588999


Q ss_pred             HHHHH
Q 028444          145 SKAVA  149 (209)
Q Consensus       145 sK~~~  149 (209)
                      +|..+
T Consensus       187 aKmy~  191 (376)
T KOG1372|consen  187 AKMYG  191 (376)
T ss_pred             hhhhh
Confidence            98844

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.41  E-value=5.9e-12  Score=90.18  Aligned_cols=154  Identities=23%  Similarity=0.260  Sum_probs=113.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |..+|.||||-.|+.+++.+.+.+  .+|+++.|++..-.  .....+.....|.+..++......++|+.+.|-|.++.
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~--at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRg   96 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP--ATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRG   96 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc--cccceeeeEEechHHHHHHHhhhcCCceEEEeeccccc
Confidence            468999999999999999999998  68999998753211  12236777888888888888888999999999886544


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                      - ...+..++++-.-...+.++++.. +++.|+.+||..+.....  .              .|...|...|.-..++. 
T Consensus        97 k-aGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sSr--F--------------lY~k~KGEvE~~v~eL~-  157 (238)
T KOG4039|consen   97 K-AGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSSR--F--------------LYMKMKGEVERDVIELD-  157 (238)
T ss_pred             c-cccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCcccc--e--------------eeeeccchhhhhhhhcc-
Confidence            2 223445555555667778888876 689999999986543221  1              17778888777666643 


Q ss_pred             cCCCEEEEecCceecCCC
Q 028444          159 EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       159 ~~~~~~~~rp~~v~g~~~  176 (209)
                       --+++++|||.+.+.+.
T Consensus       158 -F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  158 -FKHIIILRPGPLLGERT  174 (238)
T ss_pred             -ccEEEEecCcceecccc
Confidence             12589999999999765

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.40  E-value=6.1e-12  Score=102.28  Aligned_cols=160  Identities=28%  Similarity=0.294  Sum_probs=104.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHH-HHhc----CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLV-DACF----GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~-~~~~----~~d~vi~   71 (209)
                      ++|+|+||||.+|+-+++.|+++|+.|.++.|+..+...+..    ..+..-+..|.....++. .+..    ...+++-
T Consensus        80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~  159 (411)
T KOG1203|consen   80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVIK  159 (411)
T ss_pred             CeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccceeEEe
Confidence            379999999999999999999999999999998765443322    234555555555443332 2222    2346666


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      |++-... .++..--.++...++.+++++|+.. ++++++++||..+-.....++....        ...+..+|..+|.
T Consensus       160 ~~ggrp~-~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~~~~~~~~--------~~~~~~~k~~~e~  229 (411)
T KOG1203|consen  160 GAGGRPE-EEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQPPNILLL--------NGLVLKAKLKAEK  229 (411)
T ss_pred             cccCCCC-cccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCCCchhhhh--------hhhhhHHHHhHHH
Confidence            6663211 1122334568889999999999888 6899999987643221111111000        1123456667776


Q ss_pred             HHHHHhhcCCCEEEEecCceec
Q 028444          152 IALQAASEGLPIVPVYPGVIYG  173 (209)
Q Consensus       152 ~~~~~~~~~~~~~~~rp~~v~g  173 (209)
                      +++   +.|++..+|||+...-
T Consensus       230 ~~~---~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  230 FLQ---DSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             HHH---hcCCCcEEEecccccc
Confidence            655   4799999999999864

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.34  E-value=1.6e-11  Score=91.90  Aligned_cols=165  Identities=22%  Similarity=0.218  Sum_probs=116.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEE-cCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccC-
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALV-RRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV-   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~-   76 (209)
                      +|||||+-|.+|..+++.|..+ |.+-++++ --+... ....  .-.++..|+.|...+++.+-  ++|.+||..+.. 
T Consensus        46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-~V~~--~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLS  122 (366)
T KOG2774|consen   46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-NVTD--VGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLS  122 (366)
T ss_pred             eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-hhcc--cCCchhhhhhccccHHHhhcccccceeeeHHHHHH
Confidence            7999999999999999988654 65444443 222221 1111  23467789999988888774  699999998863 


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                      ...+.+.....++|+.|.-++++.++++.  -++..-|+.+++|+.++.....+-  ....|.+.|+.||.-+|-+-..+
T Consensus       123 AvGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPtSPRNPTPdl--tIQRPRTIYGVSKVHAEL~GEy~  198 (366)
T KOG2774|consen  123 AVGETNVPLALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPTSPRNPTPDL--TIQRPRTIYGVSKVHAELLGEYF  198 (366)
T ss_pred             HhcccCCceeeeecchhhhHHHHHHHHcC--eeEeecccccccCCCCCCCCCCCe--eeecCceeechhHHHHHHHHHHH
Confidence            33455666778999999999999999873  456667788889876543222211  12234578999999999777776


Q ss_pred             h-hcCCCEEEEecCceec
Q 028444          157 A-SEGLPIVPVYPGVIYG  173 (209)
Q Consensus       157 ~-~~~~~~~~~rp~~v~g  173 (209)
                      . +.|++..++|.+-+..
T Consensus       199 ~hrFg~dfr~~rfPg~is  216 (366)
T KOG2774|consen  199 NHRFGVDFRSMRFPGIIS  216 (366)
T ss_pred             HhhcCccceecccCcccc
Confidence            4 6799999999666654

>PRK06720 hypothetical protein; Provisional

Probab=99.33  E-value=6.2e-12  Score=92.03  Aligned_cols=75  Identities=19%  Similarity=0.158  Sum_probs=59.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCceEEEEccCCCHHHHHHHh-------cCcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDAC-------FGCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~-------~~~d~v   69 (209)
                      .++||||+++||+++++.|.++|++|++++|+.+....    +.. ...+.++.+|+++.+++.+++       .++|++
T Consensus        18 ~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDil   97 (169)
T PRK06720         18 VAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDML   97 (169)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999999987553321    111 124678899999998887654       358999


Q ss_pred             EEcCccC
Q 028444           70 FHTAALV   76 (209)
Q Consensus        70 i~~a~~~   76 (209)
                      |||||..
T Consensus        98 VnnAG~~  104 (169)
T PRK06720         98 FQNAGLY  104 (169)
T ss_pred             EECCCcC
Confidence            9999964

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.33  E-value=1.7e-11  Score=98.06  Aligned_cols=169  Identities=14%  Similarity=0.024  Sum_probs=111.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCC-CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      ||.|+|++|.||+.++..|..++  .++.++++...+.+... .+........+.+|+.++.+.++++|+||++||....
T Consensus        10 KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~~~~   89 (321)
T PTZ00325         10 KVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGVPRK   89 (321)
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCCCCC
Confidence            79999999999999999998655  68999998432221111 0001123344666655566788999999999997654


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCcc---ccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY---IADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~---~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      ...++.+.+..|+..+..++++++++ +.+++|+++|.-+-....-.   ......+++    ...|+.+-...-++...
T Consensus        90 ~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~----~~viG~g~LDs~R~r~~  164 (321)
T PTZ00325         90 PGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNSTVPIAAETLKKAGVYDP----RKLFGVTTLDVVRARKF  164 (321)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHhhhhhccCCCh----hheeechhHHHHHHHHH
Confidence            44567788999999999999999998 57899999885443221100   011111221    13477663444445555


Q ss_pred             Hhh-cCCCEEEEecCceecCCC
Q 028444          156 AAS-EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       156 ~~~-~~~~~~~~rp~~v~g~~~  176 (209)
                      .++ .+++...++ ++++|.+.
T Consensus       165 la~~l~v~~~~V~-~~VlGeHG  185 (321)
T PTZ00325        165 VAEALGMNPYDVN-VPVVGGHS  185 (321)
T ss_pred             HHHHhCcChhheE-EEEEeecC
Confidence            554 477777777 78888754

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.27  E-value=1.8e-11  Score=90.11  Aligned_cols=97  Identities=16%  Similarity=0.197  Sum_probs=73.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhcC-------cCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG-------CHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~-------~d~v   69 (209)
                      |+++||||||++|. ++++|.++|++|++++|++++...+    ....++.++.+|++|++++.+++++       +|++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            89999999987765 9999999999999999986543221    1123688899999999998887753       5666


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCcc----EEEEEcc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE----KIIYTSS  115 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~i~~ss  115 (209)
                      |+.                ++..++.++.++|++.+ ++    +|+++=+
T Consensus        80 v~~----------------vh~~~~~~~~~~~~~~g-v~~~~~~~~h~~g  112 (177)
T PRK08309         80 VAW----------------IHSSAKDALSVVCRELD-GSSETYRLFHVLG  112 (177)
T ss_pred             EEe----------------ccccchhhHHHHHHHHc-cCCCCceEEEEeC
Confidence            644                34556889999999874 55    7888653

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.21  E-value=4.6e-11  Score=89.02  Aligned_cols=153  Identities=19%  Similarity=0.180  Sum_probs=111.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCCCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPD   82 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~   82 (209)
                      .++-|+.||.|+++++...+.+++|.++.|+..+.-.......++|+++|.-..+-+...+.++..++-+++-+    .+
T Consensus        55 tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf----gn  130 (283)
T KOG4288|consen   55 TLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF----GN  130 (283)
T ss_pred             HhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCc----cc
Confidence            57789999999999999999999999999986532111112478899998877666666677777788777632    34


Q ss_pred             ccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcCCC
Q 028444           83 PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP  162 (209)
Q Consensus        83 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~  162 (209)
                      ...+..+|-....+-.++..+. ++++|+|+|.. .|+-. +...            ..|-.+|..+|..+..  .++.+
T Consensus       131 ~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~-d~~~~-~~i~------------rGY~~gKR~AE~Ell~--~~~~r  193 (283)
T KOG4288|consen  131 IILMDRINGTANINAVKAAAKA-GVPRFVYISAH-DFGLP-PLIP------------RGYIEGKREAEAELLK--KFRFR  193 (283)
T ss_pred             hHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhh-hcCCC-Cccc------------hhhhccchHHHHHHHH--hcCCC
Confidence            4566778888888888888888 58999999753 23211 1111            3599999999965543  34578


Q ss_pred             EEEEecCceecCCC
Q 028444          163 IVPVYPGVIYGPGK  176 (209)
Q Consensus       163 ~~~~rp~~v~g~~~  176 (209)
                      -+++|||++||-+.
T Consensus       194 giilRPGFiyg~R~  207 (283)
T KOG4288|consen  194 GIILRPGFIYGTRN  207 (283)
T ss_pred             ceeeccceeecccc
Confidence            89999999999743

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.19  E-value=2.6e-10  Score=91.80  Aligned_cols=115  Identities=17%  Similarity=0.128  Sum_probs=80.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-------CeEEEEEcCCCC--CCCCCCC-Cce-EEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTSD--ISGLPSE-GAL-ELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-------~~V~~~~r~~~~--~~~~~~~-~~~-~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      +||+||||+|+||+.++..|+..+       +++++++++...  ++....+ ..+ .....|+....++.+.++++|+|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            489999999999999999998854       589999986532  2111000 000 01123444455666778999999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEcc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss  115 (209)
                      ||+||.......+..+.++.|+.-...+.+.+.+.. ....+|.+|.
T Consensus        83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            999998655555667889999999999999998874 2345666663

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.19  E-value=6.2e-11  Score=89.63  Aligned_cols=168  Identities=21%  Similarity=0.253  Sum_probs=116.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-----CeEEEEEcCCCCCCCCCC---------CCceEEEEccCCCHHHHHHHh----
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-----HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDAC----   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-----~~V~~~~r~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~----   63 (209)
                      .++|||+++++|.+|+.+|++..     .++++.+|+..++++...         .-.+++++.|++|..++..+.    
T Consensus         5 valITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~   84 (341)
T KOG1478|consen    5 VALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIK   84 (341)
T ss_pred             EEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHH
Confidence            48999999999999999999775     357778898776543211         136899999999988876665    


Q ss_pred             ---cCcCEEEEcCccC----------------C-------C----------CCCCccchhhhHHHHHHHHHHHHHhcC--
Q 028444           64 ---FGCHVIFHTAALV----------------E-------P----------WLPDPSRFFAVNVEGLKNVVQAAKETK--  105 (209)
Q Consensus        64 ---~~~d~vi~~a~~~----------------~-------~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~--  105 (209)
                         +..|.|+-|||..                +       +          +.++....|+.|+-|...+.+.+.+..  
T Consensus        85 ~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~  164 (341)
T KOG1478|consen   85 QRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCH  164 (341)
T ss_pred             HHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhc
Confidence               3579999999852                0       1          233556789999999999999887642  


Q ss_pred             -CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecC
Q 028444          106 -TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       106 -~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~----~~~~~~~~rp~~v~g~  174 (209)
                       ....+|-+||..+-..  ....++-+-   .....+|..||.+.+-+-....+    .|+...++.||...+.
T Consensus       165 ~~~~~lvwtSS~~a~kk--~lsleD~q~---~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  165 SDNPQLVWTSSRMARKK--NLSLEDFQH---SKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             CCCCeEEEEeecccccc--cCCHHHHhh---hcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence             2347999998643211  111111111   11124599999998876554433    3677888899887664

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.16  E-value=3.5e-10  Score=84.45  Aligned_cols=175  Identities=17%  Similarity=0.157  Sum_probs=115.5

Q ss_pred             CEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCC---CCCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||+|-..  .|+..|++.|.++|.++...+.++.   +.+++.+. ....++.||+++.+++..++.       ..|
T Consensus         7 K~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD   86 (259)
T COG0623           7 KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLD   86 (259)
T ss_pred             ceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCccc
Confidence            3789999765  7999999999999999999887653   12222222 234578999999999888774       589


Q ss_pred             EEEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEccceeeccCCccccCCCcccccc
Q 028444           68 VIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        68 ~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      .|||+-++.+.          +.+.+...+++-..+...+.+++++.+.. ..+|.++-...-.-.+.+           
T Consensus        87 ~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnY-----------  155 (259)
T COG0623          87 GLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNY-----------  155 (259)
T ss_pred             EEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCC-----------
Confidence            99999997532          22344556777777788888888887643 356655422111001111           


Q ss_pred             ccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHH
Q 028444          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLL  190 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~  190 (209)
                         +.-+.+|+.-|.-.+.++    ++|+|++.+..|-+-+-...+... +..+++..
T Consensus       156 ---NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~-f~~~l~~~  209 (259)
T COG0623         156 ---NVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD-FRKMLKEN  209 (259)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc-HHHHHHHH
Confidence               235789998887666553    568999999998887643322222 34444443

>PLN00106 malate dehydrogenase

Probab=99.16  E-value=1.7e-10  Score=92.41  Aligned_cols=168  Identities=14%  Similarity=0.029  Sum_probs=111.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCC-CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      ||.|||++|.||+.++..|..++  .++.+++.+..+..... .+-.......++++.+++.+.++++|+|||+||....
T Consensus        20 KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~~   99 (323)
T PLN00106         20 KVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPRK   99 (323)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCCC
Confidence            79999999999999999998766  48999998763221110 0001112333554555677889999999999998655


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec---cCCccccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG---STDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~---~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      ...++.+.+..|...+..+.+.+.+.. +..+|+++|--+-+   -..........+    ++...|+.++...+.+...
T Consensus       100 ~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~~----p~~~viG~~~LDs~Rl~~~  174 (323)
T PLN00106        100 PGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGVY----DPKKLFGVTTLDVVRANTF  174 (323)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCCC----CcceEEEEecchHHHHHHH
Confidence            445677889999999999999999984 67777777743211   000000111111    1224588888788788777


Q ss_pred             Hhh-cCCCEEEEecCceecCC
Q 028444          156 AAS-EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       156 ~~~-~~~~~~~~rp~~v~g~~  175 (209)
                      +++ .+++...++ ++++|.+
T Consensus       175 lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        175 VAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHhCCChhheE-EEEEEeC
Confidence            774 478777775 4455544

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=99.09  E-value=9.4e-10  Score=84.36  Aligned_cols=75  Identities=25%  Similarity=0.408  Sum_probs=54.6

Q ss_pred             CEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC--HHHHHHH
Q 028444            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDA   62 (209)
Q Consensus         1 m~ilItG~----------------~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~   62 (209)
                      |+||||+|                ||++|++++++|+++|++|++++|+..... .. ..++.++.++-.+  .+.+.+.
T Consensus         1 ~~vliT~G~T~e~iD~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~-~~~v~~i~v~s~~~m~~~l~~~   78 (229)
T PRK06732          1 MKILITSGGTTEPIDSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EP-HPNLSIIEIENVDDLLETLEPL   78 (229)
T ss_pred             CEEEEcCCCcccccCCceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CC-CCCeEEEEEecHHHHHHHHHHH
Confidence            78888876                789999999999999999999987643211 11 1256776654332  2455666


Q ss_pred             hcCcCEEEEcCccCC
Q 028444           63 CFGCHVIFHTAALVE   77 (209)
Q Consensus        63 ~~~~d~vi~~a~~~~   77 (209)
                      +.++|+||||||...
T Consensus        79 ~~~~DivIh~AAvsd   93 (229)
T PRK06732         79 VKDHDVLIHSMAVSD   93 (229)
T ss_pred             hcCCCEEEeCCccCC
Confidence            778999999999753

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.09  E-value=7.7e-09  Score=84.00  Aligned_cols=75  Identities=16%  Similarity=0.086  Sum_probs=56.6

Q ss_pred             CEEEEEcCCChhHHH--HHHHHHhCCCeEEEEEcCCCCCC---------------C-CCCC-CceEEEEccCCCHHHHHH
Q 028444            1 MKILVSGASGYLGGR--LCHALLKQGHSVRALVRRTSDIS---------------G-LPSE-GALELVYGDVTDYRSLVD   61 (209)
Q Consensus         1 m~ilItG~~G~IG~~--l~~~l~~~g~~V~~~~r~~~~~~---------------~-~~~~-~~~~~~~~Dl~~~~~~~~   61 (209)
                      +++||||++++||.+  ++++| ++|++|+++++...+..               . .... ..+..+.+|+++.+++.+
T Consensus        42 K~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~  120 (398)
T PRK13656         42 KKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQK  120 (398)
T ss_pred             CEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            379999999999999  89999 99999989885332111               0 1111 235678999999988766


Q ss_pred             Hhc-------CcCEEEEcCccC
Q 028444           62 ACF-------GCHVIFHTAALV   76 (209)
Q Consensus        62 ~~~-------~~d~vi~~a~~~   76 (209)
                      +++       ++|+|||+++..
T Consensus       121 lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        121 VIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHhcCCCCEEEECCccC
Confidence            653       589999999975

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.04  E-value=6.8e-10  Score=90.30  Aligned_cols=74  Identities=28%  Similarity=0.376  Sum_probs=65.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+|+|.|+ |+||+.+++.|+++| .+|++.+|+.++..+....  .+++.++.|+.|.+.+.+++++.|+|||++.+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~   78 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP   78 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence            58999997 999999999999999 9999999997765544332  37999999999999999999999999999985

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.98  E-value=4e-09  Score=84.75  Aligned_cols=168  Identities=14%  Similarity=0.077  Sum_probs=109.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCCC--CCCCCCC-CceE-EEE--ccCCCHHHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD--ISGLPSE-GALE-LVY--GDVTDYRSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~~--~~~~~~~-~~~~-~~~--~Dl~~~~~~~~~~~~~d   67 (209)
                      +||.|+|++|.||+.++-.|+..|.       ++.+++.+...  ++....+ .... ...  ..++  ......++++|
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~daD   80 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDAD   80 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCCC
Confidence            4899999999999999999988873       79999885432  2211100 0000 000  0011  11135678999


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCc-cccccccCChHHHH
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQ-VHEEKYFCTQYERS  145 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~-~~~~~~~~~~Y~~s  145 (209)
                      +||.+||.......+..+.++.|+.-...+.+.+.+... ...+|.+|.-.-.  .......... .+    +...|+.+
T Consensus        81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~--~t~~~~k~sg~~p----~~~ViG~t  154 (322)
T cd01338          81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNT--NALIAMKNAPDIP----PDNFTAMT  154 (322)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHH--HHHHHHHHcCCCC----hHheEEeh
Confidence            999999986554456677899999999999999998852 4556666631000  0001111110 11    12458889


Q ss_pred             HHHHHHHHHHHhh-cCCCEEEEecCceecCCC
Q 028444          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       146 K~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~  176 (209)
                      +....++...+++ .+++...++..++||++.
T Consensus       155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             HHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            9999999988875 489999999989999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.98  E-value=8.5e-09  Score=82.66  Aligned_cols=112  Identities=23%  Similarity=0.193  Sum_probs=77.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh---CCCeEEEEEcCCCCCC---CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDIS---GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~---~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |||+|+||+|.||++++..|..   .++++.+++|++....   .+........+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            8999999999999999988754   2467888888743210   1111011122222  122344556789999999999


Q ss_pred             cCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      .......+..+.+..|......+++.+.+. +.+++|.+.|
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvs  118 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIIT  118 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            765444556778999999999999999998 4667766665

>cd00704 MDH Malate dehydrogenase

Probab=98.95  E-value=1.3e-08  Score=81.86  Aligned_cols=104  Identities=17%  Similarity=0.155  Sum_probs=78.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-------CeEEEEEcCC--CCCCCCCCCCceEEEEccCCCH-----------HHHHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-------HSVRALVRRT--SDISGLPSEGALELVYGDVTDY-----------RSLVD   61 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~Dl~~~-----------~~~~~   61 (209)
                      ||.||||+|.||+.++..|...|       +++.++++++  +.         .+....|+.|.           ....+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~---------~~g~~~Dl~d~~~~~~~~~~i~~~~~~   72 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA---------LEGVVMELQDCAFPLLKGVVITTDPEE   72 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc---------cceeeeehhhhcccccCCcEEecChHH
Confidence            79999999999999999998765       2588998875  32         22233344443           23456


Q ss_pred             HhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEc
Q 028444           62 ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTS  114 (209)
Q Consensus        62 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~s  114 (209)
                      .++++|+|||+||.......+..+.++.|+.-...+.+.+.+.. ....+|.+|
T Consensus        73 ~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          73 AFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             HhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            78899999999998655555667789999999999999999883 444566665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.93  E-value=5.2e-09  Score=80.10  Aligned_cols=76  Identities=16%  Similarity=0.180  Sum_probs=54.1

Q ss_pred             CEEEEEcCC----------------ChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHh
Q 028444            1 MKILVSGAS----------------GYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         1 m~ilItG~~----------------G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      |+|+||+|.                ||+|++++++|+++|++|+++++.... .........+..+.+|....+.+.+++
T Consensus         4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~   83 (229)
T PRK09620          4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSII   83 (229)
T ss_pred             CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHh
Confidence            589999886                999999999999999999998864321 111111123445566444446777777


Q ss_pred             c--CcCEEEEcCccC
Q 028444           64 F--GCHVIFHTAALV   76 (209)
Q Consensus        64 ~--~~d~vi~~a~~~   76 (209)
                      .  ++|+|||+|+..
T Consensus        84 ~~~~~D~VIH~AAvs   98 (229)
T PRK09620         84 THEKVDAVIMAAAGS   98 (229)
T ss_pred             cccCCCEEEECcccc
Confidence            4  689999999974

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.89  E-value=1.2e-09  Score=81.42  Aligned_cols=188  Identities=14%  Similarity=0.140  Sum_probs=110.4

Q ss_pred             EEEEcCCChhHHHHHH-----HHHhCC----CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            3 ILVSGASGYLGGRLCH-----ALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         3 ilItG~~G~IG~~l~~-----~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      .++-+++|+|++.|..     ++-+.+    |.|++++|++.+.       +.+|-..|..-.      ...++..+|++
T Consensus        15 a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-------ritw~el~~~Gi------p~sc~a~vna~   81 (315)
T KOG3019|consen   15 AVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-------RITWPELDFPGI------PISCVAGVNAV   81 (315)
T ss_pred             CCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------ccccchhcCCCC------ceehHHHHhhh
Confidence            4567889999988876     333334    8999999987653       233433333321      11334444444


Q ss_pred             cc-----CCCCCCCcc-chhhhHHHHHHHHHHHHHhcCCcc-EEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           74 AL-----VEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        74 ~~-----~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      +-     .+.|.+.++ +.....+..+..|.+++.+..... .+|.+|...+|-+.....++|+......+    | .++
T Consensus        82 g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd----~-~sr  156 (315)
T KOG3019|consen   82 GNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFD----I-LSR  156 (315)
T ss_pred             hhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChH----H-HHH
Confidence            42     233444433 345566777899999998775443 69999999999876555455544332211    1 222


Q ss_pred             HH--HHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHH----HhcCCceEEEEEEeeeeecC
Q 028444          147 AV--ADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRL----LFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       147 ~~--~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~i  209 (209)
                      ..  -|..++. +.+..+++++|.|.+.|.+.......+..+-..    +-+|.+.+.|+|++|+|..|
T Consensus       157 L~l~WE~aA~~-~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li  224 (315)
T KOG3019|consen  157 LCLEWEGAALK-ANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLI  224 (315)
T ss_pred             HHHHHHHHhhc-cCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHH
Confidence            21  1111211 223589999999999998653322222111111    23688899999999998653

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.84  E-value=5.3e-08  Score=78.40  Aligned_cols=107  Identities=18%  Similarity=0.132  Sum_probs=77.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCCCCCCCCCCCceEEEEccCCCHH-----------HHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDISGLPSEGALELVYGDVTDYR-----------SLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~-----------~~~~~~   63 (209)
                      +|.|+|++|.||+.++..|...+.       +++++++++...       ..+....|+.|..           .....+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            589999999999999999987552       588998864421       1122233444433           334677


Q ss_pred             cCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEcc
Q 028444           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss  115 (209)
                      +++|+||++||.......++.+.++.|+.-...+.+.+.+.. ....+|.+|.
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            899999999997655445577889999999999999999873 3355666663

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.80  E-value=5.4e-09  Score=74.19  Aligned_cols=107  Identities=18%  Similarity=0.235  Sum_probs=76.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCC---------CCCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP---------SEGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|++|.+|++++..|..++  .++.++++++++++...         ..........   +    .+.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSG---D----YEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEES---S----GGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccc---c----ccccccccEE
Confidence            899999999999999999999887  57999998754322100         0011222222   2    2356889999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-+||.......+..+.++.|..-...+.+.+.+......++.+|
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            999997655445667789999999999999999885444566665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.73  E-value=1.3e-07  Score=73.52  Aligned_cols=73  Identities=15%  Similarity=0.157  Sum_probs=58.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~   75 (209)
                      |+|||+||||. |+.++++|.+.|++|++..++......+... +...+..+..|.+++...++  ++|+||+++.+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~-g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH-QALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc-CCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            89999999999 9999999999999999999987655444432 33455566778888888775  59999999875

This enzyme was found to be a monomer by gel filtration.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.72  E-value=1.4e-08  Score=76.07  Aligned_cols=75  Identities=20%  Similarity=0.195  Sum_probs=59.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+||+|.+|+.+++.|.+.|++|+++.|+.++.+.+..    ..+.....+|..+.+++.++++++|+||++.+.
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~  107 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAA  107 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCC
Confidence            479999999999999999999999999999998654432211    123456677888999998999999999987653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.71  E-value=1.5e-08  Score=83.73  Aligned_cols=72  Identities=32%  Similarity=0.444  Sum_probs=57.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-C-eEEEEEcCCCCCCCCC---CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            3 ILVSGASGYLGGRLCHALLKQG-H-SVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g-~-~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+|.|| |++|+.+++.|++++ . +|++.+|+..+++++.   ...++++++.|+.|.+++.++++++|+||||+++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            789999 999999999999887 4 8999999977644332   2358999999999999999999999999999985

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.67  E-value=4.7e-08  Score=74.92  Aligned_cols=61  Identities=16%  Similarity=0.273  Sum_probs=45.1

Q ss_pred             CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-------cCcCEEEEcCccC
Q 028444            9 SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTAALV   76 (209)
Q Consensus         9 ~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~~a~~~   76 (209)
                      ||+||++++++|+++|++|+++++... ....      ....+|+++.+++.+++       .++|++|||||..
T Consensus        24 SGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~~------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~   91 (227)
T TIGR02114        24 TGHLGKIITETFLSAGHEVTLVTTKRA-LKPE------PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS   91 (227)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEcChhh-cccc------cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence            789999999999999999999876321 1110      12346888877766543       3689999999964

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.64  E-value=1.8e-07  Score=77.31  Aligned_cols=70  Identities=21%  Similarity=0.357  Sum_probs=55.4

Q ss_pred             CEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-
Q 028444            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-   63 (209)
Q Consensus         1 m~ilItG~----------------~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-   63 (209)
                      ++++||||                ||.+|++++++|.++|++|++++++.. .. ...  +  ...+|+++.+++.+++ 
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-~~~--~--~~~~dv~~~~~~~~~v~  262 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-TPA--G--VKRIDVESAQEMLDAVL  262 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-CCC--C--cEEEccCCHHHHHHHHH
Confidence            47999999                888999999999999999999988653 21 111  2  3467999988877665 


Q ss_pred             ---cCcCEEEEcCccC
Q 028444           64 ---FGCHVIFHTAALV   76 (209)
Q Consensus        64 ---~~~d~vi~~a~~~   76 (209)
                         .++|++|||||..
T Consensus       263 ~~~~~~DilI~~Aav~  278 (399)
T PRK05579        263 AALPQADIFIMAAAVA  278 (399)
T ss_pred             HhcCCCCEEEEccccc
Confidence               3689999999974

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.61  E-value=4.4e-07  Score=72.80  Aligned_cols=111  Identities=19%  Similarity=0.242  Sum_probs=75.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCC--CCCCCCCCC-------CceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRT--SDISGLPSE-------GALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~--~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|++|.+|+.++..|+..|.  +|++++|+.  ++++.....       .+... ....++  +. +.++++|+|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~-~~l~~aDiV   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DL-SDVAGSDIV   76 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CH-HHhCCCCEE
Confidence            8999999999999999999999985  599999954  332211100       01000 111111  12 247899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      |-++|.......+..+.++.|+.-...+++.+.+......+|.+++
T Consensus        77 iitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9999975433334466788999999999999888754446777765

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.53  E-value=7.2e-08  Score=76.52  Aligned_cols=76  Identities=17%  Similarity=0.262  Sum_probs=62.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHh----CCCeEEEEEcCCCCCCCCCC---------CCceEEEEccCCCHHHHHHHhcCcCE
Q 028444            2 KILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~----~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~d~   68 (209)
                      .++|.|||||-|.++++++++    .|.+.-+..|+..++.+...         .....++.+|.+|++++.++.+++.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            379999999999999999998    67888889999876543111         12334889999999999999999999


Q ss_pred             EEEcCccCC
Q 028444           69 IFHTAALVE   77 (209)
Q Consensus        69 vi~~a~~~~   77 (209)
                      |+||+|+.+
T Consensus        87 ivN~vGPyR   95 (423)
T KOG2733|consen   87 IVNCVGPYR   95 (423)
T ss_pred             EEeccccce
Confidence            999999753

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.51  E-value=9.4e-07  Score=70.66  Aligned_cols=113  Identities=17%  Similarity=0.107  Sum_probs=77.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC--CCCC-CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--LPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~--~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |||.|+|++|.+|+.++-.|+.+|  .++.+++.+..+.+.  +... ........  ...+++...++++|+||-+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEeCCC
Confidence            899999999999999999998888  589999887211111  1110 01111111  0112244567999999999997


Q ss_pred             CCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      ......+..+.++.|..-...+.+.+.+......+|.+|.
T Consensus        79 ~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          79 PRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            6554456677899999999999999998854445666653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.49  E-value=1.2e-06  Score=70.30  Aligned_cols=106  Identities=18%  Similarity=0.259  Sum_probs=77.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCC---------CceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSE---------GALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~---------~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      +||.|+|+ |.+|+.++..|+..|  +++++++|+.++.+.....         .......   .+.+    .++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~----~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS----DCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH----HhCCCCEE
Confidence            58999995 999999999999999  6899999987754432221         1112221   2222    35899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |+++|.......+..+.++.|..-...+.+.+++......+|.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999997655445566789999999999999999875444566666

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.45  E-value=2.2e-06  Score=69.03  Aligned_cols=114  Identities=13%  Similarity=0.110  Sum_probs=75.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCC--CCCCCCC-CCceE-EEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTS--DISGLPS-EGALE-LVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~--~~~~~~~-~~~~~-~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      +||.|+|++|+||+.++..|...|.       ++.+++.+..  +++-... ..... ....+..-...-...++++|+|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDvV   83 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDAA   83 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCEE
Confidence            4899999999999999999988873       7999988542  1221100 00000 0000100001123567899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~s  114 (209)
                      |.+||.......+..+.+..|+.-...+.+.+.+... ...+|.+|
T Consensus        84 VitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        84 LLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            9999976555556778899999999999999998853 34566665

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.43  E-value=3.1e-07  Score=74.00  Aligned_cols=71  Identities=24%  Similarity=0.382  Sum_probs=52.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-C-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-G-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      ++++||||+|+||+.++++|.++ | .+++++.|+..++..+..+    +..+|+.   .+.+++.++|+|||+++....
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e----l~~~~i~---~l~~~l~~aDiVv~~ts~~~~  228 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE----LGGGKIL---SLEEALPEADIVVWVASMPKG  228 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH----hccccHH---hHHHHHccCCEEEECCcCCcC
Confidence            47999999999999999999864 5 6899998876655443321    1123443   355778899999999996543

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.41  E-value=2.9e-07  Score=73.19  Aligned_cols=73  Identities=14%  Similarity=0.123  Sum_probs=56.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCC---CCCCCCC----CC-CceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRT---SDISGLP----SE-GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~---~~~~~~~----~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      +++|+|+ |++|++++..|++.|++ |+++.|+.   ++.+++.    .. .++.....|+++.+++...++.+|+|||+
T Consensus       128 ~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINa  206 (289)
T PRK12548        128 KLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNA  206 (289)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEe
Confidence            6899998 89999999999999986 99999985   3332211    11 23456678998888888888889999998


Q ss_pred             Ccc
Q 028444           73 AAL   75 (209)
Q Consensus        73 a~~   75 (209)
                      -..
T Consensus       207 Tp~  209 (289)
T PRK12548        207 TLV  209 (289)
T ss_pred             CCC
Confidence            754

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.38  E-value=2e-06  Score=69.15  Aligned_cols=106  Identities=18%  Similarity=0.227  Sum_probs=75.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCC--------CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPS--------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      +||.|+|+ |.||+.++..|+..|.  ++.+++++.+.++....        ...+.....   +.    +.++++|+||
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~~----~~~~~adivI   78 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---DY----SDCKDADLVV   78 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---CH----HHhCCCCEEE
Confidence            48999997 9999999999998885  79999987664321110        012222221   22    3468999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+||.......+..+.++.|..-...+++.+.+......+|.+|
T Consensus        79 itag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         79 ITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99997654445566789999999999999998875444566665

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.36  E-value=3e-07  Score=72.47  Aligned_cols=75  Identities=19%  Similarity=0.251  Sum_probs=63.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      .++|-||+||.|..++++|.++|.+-.+-.|+..++..+...-+.++-..++-+++.+...+.+.++|+||+|++
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPy   82 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPY   82 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccccc
Confidence            489999999999999999999999888889998887755544455566667777999999999999999999975

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.35  E-value=3.1e-06  Score=64.79  Aligned_cols=73  Identities=27%  Similarity=0.421  Sum_probs=62.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+++|.| .|-+|+.+|+.|.++|++|+++++++++.++ ......+..+.+|-+|++.++++ +.++|++|-.-+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            7899988 5999999999999999999999999877655 22234789999999999999998 678999986654

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=98.35  E-value=7e-06  Score=65.27  Aligned_cols=108  Identities=21%  Similarity=0.274  Sum_probs=76.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCC--------CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSE--------GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |+||+.++-.|+.++  .++.+++.+.+.++-...+        ..-..+.+| .+    .+.++++|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            79999999 999999999998776  3899999884433211110        011222222 12    23568899999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      -.||..+.+..+..+.++.|..-...+.+.+.+......|+.+|
T Consensus        75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            99998766656677889999999999999999885434555555

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.34  E-value=2.2e-06  Score=70.64  Aligned_cols=98  Identities=15%  Similarity=0.235  Sum_probs=68.5

Q ss_pred             CEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHH-HHHh
Q 028444            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-VDAC   63 (209)
Q Consensus         1 m~ilItG~----------------~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~~~   63 (209)
                      ++++||||                ||.+|.+++++|..+|++|+++.++....  .+.  ++  ...|+++.+++ ..++
T Consensus       186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--~~~--~~--~~~~v~~~~~~~~~~~  259 (390)
T TIGR00521       186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--TPP--GV--KSIKVSTAEEMLEAAL  259 (390)
T ss_pred             ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--CCC--Cc--EEEEeccHHHHHHHHH
Confidence            36999999                34699999999999999999988764321  111  22  45788888777 4333


Q ss_pred             ----cCcCEEEEcCccCCC-----CCCC---ccchhhhHHHHHHHHHHHHHhc
Q 028444           64 ----FGCHVIFHTAALVEP-----WLPD---PSRFFAVNVEGLKNVVQAAKET  104 (209)
Q Consensus        64 ----~~~d~vi~~a~~~~~-----~~~~---~~~~~~~n~~~~~~l~~~~~~~  104 (209)
                          .++|++|++||..+.     ...+   ..+.+..|+.-+..+++.+++.
T Consensus       260 ~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       260 NELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             HhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence                368999999997422     1111   1223557788888888888865

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05442 malate dehydrogenase; Provisional

Probab=98.31  E-value=1.1e-05  Score=64.99  Aligned_cols=112  Identities=14%  Similarity=0.067  Sum_probs=74.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCCC--CCCCCC-CCceE-EEE--ccCCCHHHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD--ISGLPS-EGALE-LVY--GDVTDYRSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~~--~~~~~~-~~~~~-~~~--~Dl~~~~~~~~~~~~~d   67 (209)
                      +||.|+|++|.||+.++-.|+..|.       ++.+++.++..  ++.... ..... ...  ..++  ..-.+.++++|
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~daD   82 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKDAD   82 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCCCC
Confidence            3799999999999999999887662       78888885432  211110 00000 000  0011  11234568899


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEc
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~s  114 (209)
                      +||-+||.......+..+.++.|+.-...+.+.+.+... ...+|.+|
T Consensus        83 iVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         83 VALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999976554556777899999999999999998542 34566666

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.29  E-value=6.9e-06  Score=65.81  Aligned_cols=112  Identities=21%  Similarity=0.136  Sum_probs=76.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC--CCCC-CceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--LPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~--~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ||.|+|++|.||+.++-.|+.++  .++.++++++.....  +... ....+....  +.++....++++|+||-+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCCC
Confidence            68999999999999999998887  478888886622111  1110 011111100  1112345789999999999976


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      .....+..+.++.|..-...+.+.+.+......+|.+|.
T Consensus        79 ~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        79 RKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            544456677899999999999999988853345666653

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.27  E-value=0.00056  Score=49.03  Aligned_cols=155  Identities=18%  Similarity=0.203  Sum_probs=91.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC--C-HHHH----HHHh--cCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT--D-YRSL----VDAC--FGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~--~-~~~~----~~~~--~~~d~vi~~   72 (209)
                      +++|.||-|-+|++.++.|.+++|-|.-++-.+.+...     .-..+..|-+  + ++++    .+.+  +++|.|+.-
T Consensus         5 rVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CV   79 (236)
T KOG4022|consen    5 RVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCV   79 (236)
T ss_pred             eEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----ceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEe
Confidence            79999999999999999999999988887765432111     1112222222  1 2222    2222  258999998


Q ss_pred             Ccc-CCCCCC------CccchhhhHHHHHHHHHHHHHhcCCccEEEEEcccee-eccCCccccCCCccccccccCChHHH
Q 028444           73 AAL-VEPWLP------DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        73 a~~-~~~~~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~-~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      ||- ...+..      +-+.+++-.+....--...+.++.+...++.+..... .++.++.              -.|+.
T Consensus        80 AGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM--------------IGYGM  145 (236)
T KOG4022|consen   80 AGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM--------------IGYGM  145 (236)
T ss_pred             eccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcc--------------cchhH
Confidence            873 222222      2233444333333322333334445556776665432 3332222              23999


Q ss_pred             HHHHHHHHHHHHhh--cCCC----EEEEecCceecCC
Q 028444          145 SKAVADKIALQAAS--EGLP----IVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~~~--~~~~----~~~~rp~~v~g~~  175 (209)
                      +|++..++.+.++.  .|++    .+.+.|-.+.+|.
T Consensus       146 AKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPM  182 (236)
T KOG4022|consen  146 AKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPM  182 (236)
T ss_pred             HHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcc
Confidence            99999999998763  3554    6667788888873

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.26  E-value=1.6e-06  Score=73.21  Aligned_cols=73  Identities=21%  Similarity=0.293  Sum_probs=61.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+++|+|+ |.+|+++++.|.+.|++|+++++++.+.+.+....++.++.+|.++.+.+.++ +.++|.||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            89999996 99999999999999999999999876655443323689999999999999888 788998887654

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=98.25  E-value=5.7e-06  Score=66.39  Aligned_cols=106  Identities=22%  Similarity=0.330  Sum_probs=74.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCCC----CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPSE----GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|+.+|  .+|.+++++.++.+.    +...    ........   +.    +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d~----~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---DY----ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---CH----HHhCCCCEEE
Confidence            89999997 999999999999999  689999998754431    1110    11222222   22    3478999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+++.......+..+.+..|+.-...+.+.+.+......++.++
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99996543344556678889999999999988875334455554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=98.19  E-value=6.3e-06  Score=68.74  Aligned_cols=107  Identities=15%  Similarity=0.136  Sum_probs=76.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-------CC--eEEEEEcCCCCCCCCCCC---------CceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-------GH--SVRALVRRTSDISGLPSE---------GALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-------g~--~V~~~~r~~~~~~~~~~~---------~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      ||.|+|++|.||.+++-.|+..       |.  ++++++++.++++-...+         .++.+...   +    .+.+
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye~~  174 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YEVF  174 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HHHh
Confidence            7999999999999999999887       53  788888877654321100         11111111   2    2456


Q ss_pred             cCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHh-cCCccEEEEEcc
Q 028444           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE-TKTVEKIIYTSS  115 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~i~~ss  115 (209)
                      +++|+||-.||.......+..+.++.|+.-...+.+.+.+ ......+|.+|.
T Consensus       175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            8899999999976554456677899999999999999998 444456666663

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=98.15  E-value=1.2e-05  Score=64.48  Aligned_cols=107  Identities=16%  Similarity=0.167  Sum_probs=73.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCC-------CC-CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL-------PS-EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~-------~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.||+.++-.|+..|  .++.+++.+.+.++..       .. .....+...  .|.+    .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS----VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH----HhCCCCEEE
Confidence            58999995 999999999998887  5799998876533210       00 011122221  1232    368999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+||.......+..+.++.|..-...+.+.+.+......+|.+|
T Consensus        77 itaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            99997544334556788999999999999998885444566666

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=98.11  E-value=4e-05  Score=59.37  Aligned_cols=112  Identities=20%  Similarity=0.124  Sum_probs=73.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC---eEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      ||.|.||+|+||+.|.-.| +...   +..+.+-...+ ......+-.........+-.+.++++++++|+||--||..+
T Consensus        30 KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPR  108 (345)
T KOG1494|consen   30 KVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPR  108 (345)
T ss_pred             eEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCC
Confidence            7899999999999997765 4443   33333322111 00000000111222334456789999999999999999876


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..--..++.|++|..-...|..++.+......+.++|
T Consensus       109 KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  109 KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            5545567889999999999999998875444566665

>PTZ00117 malate dehydrogenase; Provisional

Probab=98.11  E-value=1.9e-05  Score=63.71  Aligned_cols=109  Identities=17%  Similarity=0.136  Sum_probs=73.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCC-------CCCce-EEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLP-------SEGAL-ELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~-------~~~~~-~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      |||.|+|| |.+|+.++..++..| .++.+++.+++.++...       ...+. ..+.+ -+|   .+ .++++|+||.
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l~~ADiVVi   79 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DIKDSDVVVI   79 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-HhCCCCEEEE
Confidence            58999996 999999999998888 78999998765432100       00011 11111 112   23 5689999999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      +++..+....+..+.+..|..-...+++.+.+......+|++|.
T Consensus        80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99875443445566788888888888888887743334666653

>PLN02602 lactate dehydrogenase

Probab=98.09  E-value=2.8e-05  Score=63.35  Aligned_cols=107  Identities=16%  Similarity=0.190  Sum_probs=74.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC--------CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS--------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      +||.|+|+ |.||+.++-.|+..+  .++.+++.+++.++....        .....+ .++ .|.    ..++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy----~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDY----AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCH----HHhCCCCEEE
Confidence            38999995 999999999998887  479999987654321110        011222 211 122    2368999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      -+||.......+..+.+..|+.-...+.+.+.+......+|.+|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99997544444556788999999999999998875444566666

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=98.07  E-value=1.5e-05  Score=62.49  Aligned_cols=112  Identities=19%  Similarity=0.104  Sum_probs=74.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC----CeEEEEEcCCCCCCCCCCC-Cce-EE-EEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            3 ILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSE-GAL-EL-VYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~-~~~-~~-~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |.|+|++|.+|..++..|+..|    .++.++++++++++....+ ..+ .. ....++--.+....++++|+||..++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5789999999999999999888    7999999877654321110 000 00 001111111234567899999999987


Q ss_pred             CCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..............|+.....+.+.+.+......+|..|
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            544334445678889999999999998875434566665

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=98.01  E-value=0.00022  Score=57.24  Aligned_cols=105  Identities=18%  Similarity=0.218  Sum_probs=73.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCC------CCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS------EGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~------~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      ||.|+|+ |.||+.++..|+.++  .++.+++.+.++++.    +..      ...+.+..+|       ...++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            6889997 999999999998887  479999987654321    110      0123444333       2356899999


Q ss_pred             EEcCccCCCCCCC--ccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPD--PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-+||.......+  ..+.++.|..-...+.+.+.+......+|.+|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999975433233  36789999999999999999885334455555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=98.01  E-value=2.5e-05  Score=62.65  Aligned_cols=107  Identities=21%  Similarity=0.255  Sum_probs=71.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC----CC---C--ceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP----SE---G--ALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~----~~---~--~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|+.++..++..|. +|++++++++.++...    ..   .  ... +.. -+|.    +.++++|+||
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~----~~~~~aDiVi   75 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDY----EDIAGSDVVV   75 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCH----HHHCCCCEEE
Confidence            58999998 9999999999998875 8999998765432110    00   0  011 111 0122    3468999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+++.......+..+.+..|+.-...+++.+.+......+|.+|
T Consensus        76 i~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         76 ITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99986543333444567788888888888888774334466665

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.01  E-value=3.9e-05  Score=63.24  Aligned_cols=101  Identities=21%  Similarity=0.266  Sum_probs=63.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~~~~   78 (209)
                      |||.|.||||++|+.+++.|.++ +.++..+.++....+.+... .......|+.+.+.+... ++++|+|+-+.+.   
T Consensus        39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~-~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~---  114 (381)
T PLN02968         39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV-FPHLITQDLPNLVAVKDADFSDVDAVFCCLPH---  114 (381)
T ss_pred             cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh-CccccCccccceecCCHHHhcCCCEEEEcCCH---
Confidence            58999999999999999999988 57899988754332222111 111222344433333322 4789999987762   


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~  121 (209)
                                   .....++..+. .  ..++|-.|+..-+.+
T Consensus       115 -------------~~s~~i~~~~~-~--g~~VIDlSs~fRl~~  141 (381)
T PLN02968        115 -------------GTTQEIIKALP-K--DLKIVDLSADFRLRD  141 (381)
T ss_pred             -------------HHHHHHHHHHh-C--CCEEEEcCchhccCC
Confidence                         13555556553 2  258999998765543

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=98.01  E-value=4.4e-05  Score=61.21  Aligned_cols=109  Identities=20%  Similarity=0.218  Sum_probs=72.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCC-C---CCCC---Cce-EEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDIS-G---LPSE---GAL-ELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~-~---~~~~---~~~-~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      |||.|+|+ |.+|..++..|+..|. +|++++..++..+ .   +...   ... ..+.. -.|.   .+ ++++|+||-
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d~---~~-~~~aDiVIi   75 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNNY---AD-TANSDIVVI   75 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCCH---HH-hCCCCEEEE
Confidence            78999996 9999999999999886 8999998644221 0   0000   000 11111 0122   22 578999999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      ++|.......+..+.+..|+.-...+++.+.+......+|.+|.
T Consensus        76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99964333334456788999999999999988753345666663

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.99  E-value=4.3e-05  Score=56.60  Aligned_cols=62  Identities=18%  Similarity=0.291  Sum_probs=39.6

Q ss_pred             CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHH----HHHhcCcCEEEEcCccC
Q 028444            9 SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----VDACFGCHVIFHTAALV   76 (209)
Q Consensus         9 ~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~----~~~~~~~d~vi~~a~~~   76 (209)
                      ||-.|.+|++.+..+|++|+++..... .. .+  .+++.+..  ...+++    .+.+.+.|++||+|+.+
T Consensus        28 SG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-~p--~~~~~i~v--~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   28 SGKMGAALAEEAARRGAEVTLIHGPSS-LP-PP--PGVKVIRV--ESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEecCcc-cc-cc--ccceEEEe--cchhhhhhhhccccCcceeEEEecchh
Confidence            799999999999999999999987632 11 11  26666664  454444    44456789999999974

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.99  E-value=0.00011  Score=59.80  Aligned_cols=68  Identities=24%  Similarity=0.333  Sum_probs=46.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCe---EEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHS---VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|+|.||||++|+.+++.|.++++.   +..+.+.....+.+.- .+.+....|+.+.     .+.++|+||-+++
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~-~g~~i~v~d~~~~-----~~~~vDvVf~A~g   72 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSF-KGKELKVEDLTTF-----DFSGVDIALFSAG   72 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeee-CCceeEEeeCCHH-----HHcCCCEEEECCC
Confidence            68999999999999999999997764   4777665433322221 1344555566532     2368999998876

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.95  E-value=3e-05  Score=63.75  Aligned_cols=106  Identities=13%  Similarity=0.126  Sum_probs=71.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-e----EEE--E--EcCCCCCCCCCC---------CCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-S----VRA--L--VRRTSDISGLPS---------EGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~----V~~--~--~r~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      ||.|+|++|.+|+.++-.|+..|. .    +.+  +  +++.++++....         ..++.+...   +    ...+
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~~~  118 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YEVF  118 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HHHh
Confidence            799999999999999999988872 2    333  3  555554321100         011111111   2    2456


Q ss_pred             cCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEc
Q 028444           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTS  114 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~s  114 (209)
                      +++|+||..||.......+..+.++.|+.-...+.+.+.+..+. ..+|.+|
T Consensus       119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            89999999999765555566778999999999999999985423 3566665

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.94  E-value=4.3e-05  Score=61.16  Aligned_cols=105  Identities=19%  Similarity=0.202  Sum_probs=72.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCC--------CceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            3 ILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSE--------GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |.|.|+ |.+|+.++-.|+..|  .++++++++.++++.....        ........  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            467885 889999999999888  6899999876643321110        11122211  12    2367899999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ||.......+..+.+..|+.-...+.+.+++......+|.+|
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            997544444556778899999999999999875344566665

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.92  E-value=3.6e-05  Score=64.71  Aligned_cols=67  Identities=22%  Similarity=0.297  Sum_probs=47.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+||+|.+|+.+++.|.+.|++|++++|++..........++.+     .  ....+++.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-----~--~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-----A--NDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-----c--cCHHHHhccCCEEEEecC
Confidence            899999999999999999999999999999987654322111112211     1  122345678899988765

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.90  E-value=0.00012  Score=59.07  Aligned_cols=108  Identities=19%  Similarity=0.230  Sum_probs=71.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC--C-----CC-C-CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG--L-----PS-E-GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~--~-----~~-~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      +||.|+| +|.+|+.++..++..|. +|++++.+++.+..  +     .. . ....+..  -+|.    +.++++|+||
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~----~~l~~aDiVI   79 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY----EDIAGSDVVI   79 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH----HHhCCCCEEE
Confidence            3799999 59999999999998894 89999987764321  0     00 0 1122221  1232    3568999999


Q ss_pred             EcCccCCCCCC-----CccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           71 HTAALVEPWLP-----DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        71 ~~a~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      .+++.......     +..+.+..|+.-...+++.+.+......+|.+|.
T Consensus        80 ~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         80 VTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             ECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99997433222     3345677888888888888887753335666663

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.86  E-value=0.00014  Score=59.01  Aligned_cols=100  Identities=23%  Similarity=0.272  Sum_probs=64.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC----------------------------CCCCCceEEEEcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----------------------------LPSEGALELVYGD   52 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~D   52 (209)
                      +|+|.|+ |.+|+.+++.|+..|. ++++++++.-+...                            ....-.++.+..|
T Consensus        26 ~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~  104 (338)
T PRK12475         26 HVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTD  104 (338)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEecc
Confidence            6999995 8899999999999996 88888876421111                            0111235556667


Q ss_pred             CCCHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           53 VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        53 l~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      ++ .+.+.++++++|+||.+..               |...-..+.+.|.+..  ..+|+.+....+|
T Consensus       105 ~~-~~~~~~~~~~~DlVid~~D---------------~~~~r~~in~~~~~~~--ip~i~~~~~g~~G  154 (338)
T PRK12475        105 VT-VEELEELVKEVDLIIDATD---------------NFDTRLLINDLSQKYN--IPWIYGGCVGSYG  154 (338)
T ss_pred             CC-HHHHHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcC--CCEEEEEecccEE
Confidence            75 4567778889999998753               1222344566777663  3566666544444

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.86  E-value=1e-06  Score=62.03  Aligned_cols=68  Identities=21%  Similarity=0.311  Sum_probs=48.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCCCCCCCCC---CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|.|+ |++|++++..|.+.|.+ |+++.|+.++++.+.+.   ..+.++  ++   +++...+.++|+||++.+.
T Consensus        14 ~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~---~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen   14 RVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PL---EDLEEALQEADIVINATPS   85 (135)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EG---GGHCHHHHTESEEEE-SST
T ss_pred             EEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eH---HHHHHHHhhCCeEEEecCC
Confidence            7999995 99999999999999976 99999987665443321   123333  33   3344667889999999774

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.84  E-value=0.00019  Score=58.40  Aligned_cols=100  Identities=27%  Similarity=0.320  Sum_probs=66.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC----------------------------CCCCCceEEEEcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----------------------------LPSEGALELVYGD   52 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~D   52 (209)
                      +|+|.|+ |++|+.+++.|+..|. ++++++++.-+...                            +...-.++.+..+
T Consensus        26 ~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~  104 (339)
T PRK07688         26 HVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQD  104 (339)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence            6899995 9999999999999997 89998875311100                            0111234555556


Q ss_pred             CCCHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           53 VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        53 l~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      ++ .+.+.+++++.|+||.+..               |...-..+.+.|.+..  ..+|+.++...||
T Consensus       105 ~~-~~~~~~~~~~~DlVid~~D---------------n~~~r~~ln~~~~~~~--iP~i~~~~~g~~G  154 (339)
T PRK07688        105 VT-AEELEELVTGVDLIIDATD---------------NFETRFIVNDAAQKYG--IPWIYGACVGSYG  154 (339)
T ss_pred             CC-HHHHHHHHcCCCEEEEcCC---------------CHHHHHHHHHHHHHhC--CCEEEEeeeeeee
Confidence            64 4456677888899887743               2334556777888763  4577777665555

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.80  E-value=1.1e-05  Score=57.88  Aligned_cols=72  Identities=18%  Similarity=0.132  Sum_probs=48.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++++|+|+ |.+|+.+++.|.+.| ++|++.+|+.++.+.+....+...+..+..+.   .++++++|+||++....
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPVG   92 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCCC
Confidence            47899996 999999999999986 78999998866543322211111112234443   33468899999998753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.79  E-value=9.5e-05  Score=50.38  Aligned_cols=70  Identities=23%  Similarity=0.373  Sum_probs=53.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+|.|. |-+|+.+++.|.+.+.+|+++++++...+.+.. .++.++.+|.++++.++++ +++++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-EGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-cccccccccchhhhHHhhcCccccCEEEEccC
Confidence            578885 789999999999977799999998765443333 2689999999999999885 457888886643

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.78  E-value=0.00023  Score=49.33  Aligned_cols=86  Identities=19%  Similarity=0.234  Sum_probs=52.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh-CCCeEEEEE-cCCCCCC-C-CCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALV-RRTSDIS-G-LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~-r~~~~~~-~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |||+|.|++|-+|+.+++.+.+ .++++.+.. |++.... . .....+..  ...+.-.+++.++++.+|++|....  
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~--   76 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTN--   76 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCC--
Confidence            7999999999999999999998 678877754 4441111 0 00000000  0111112456777778999998753  


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhc
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKET  104 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~  104 (209)
                                    ..+....++.+.++
T Consensus        77 --------------p~~~~~~~~~~~~~   90 (124)
T PF01113_consen   77 --------------PDAVYDNLEYALKH   90 (124)
T ss_dssp             --------------HHHHHHHHHHHHHH
T ss_pred             --------------hHHhHHHHHHHHhC
Confidence                          34466677777777

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.72  E-value=0.00056  Score=47.12  Aligned_cols=92  Identities=22%  Similarity=0.263  Sum_probs=53.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCC-CCCCCCCC----Cce-EEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTS-DISGLPSE----GAL-ELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~-~~~~~~~~----~~~-~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ||.|+||||++|+.+++.|.+.. +++..+..++. .-+.+...    .+. ....-| .+.+    .+.++|+|+.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence            68999999999999999998865 56555554433 22221111    011 111112 2332    3488999999976


Q ss_pred             cCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                      .                .....+...+.+.+  -++|-.|+.
T Consensus        76 ~----------------~~~~~~~~~~~~~g--~~ViD~s~~   99 (121)
T PF01118_consen   76 H----------------GASKELAPKLLKAG--IKVIDLSGD   99 (121)
T ss_dssp             H----------------HHHHHHHHHHHHTT--SEEEESSST
T ss_pred             h----------------hHHHHHHHHHhhCC--cEEEeCCHH
Confidence            2                12444555555553  367777764

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.71  E-value=0.00015  Score=57.97  Aligned_cols=102  Identities=17%  Similarity=0.198  Sum_probs=71.1

Q ss_pred             EEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC---------CCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            5 VSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         5 ItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+| +|.||+.++..|+..+  .++.+++.+.+.++....         ...+.+..   .+    ...++++|+||-.|
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence            456 5999999999998887  479999987654321110         01222321   22    24678999999999


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |.......+..+.++.|+.-...+.+.+.+......+|.+|
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            97654444566789999999999999999875445667666

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.71  E-value=5.4e-05  Score=63.95  Aligned_cols=68  Identities=25%  Similarity=0.313  Sum_probs=51.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CC----CCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DI----SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+++ +|.++++.|+++|++|++.+++.. ..    +++.. .+++++.+|..+     ....++|+||++++.
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~d~vv~~~g~   78 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIELVLGEYPE-----EFLEGVDLVVVSPGV   78 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCEEEeCCcch-----hHhhcCCEEEECCCC
Confidence            3799999877 999999999999999999998642 11    11111 257788888876     235679999999986

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.71  E-value=8.9e-05  Score=67.88  Aligned_cols=73  Identities=22%  Similarity=0.133  Sum_probs=57.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-Ce-------------EEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHHhcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HS-------------VRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~-------------V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~   66 (209)
                      +|+|.|+ |+||+..++.|.+.+ ++             |.+.+++..+++.+.+. .+++.++.|++|.+++.++++++
T Consensus       571 rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~~~  649 (1042)
T PLN02819        571 NVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVSQV  649 (1042)
T ss_pred             cEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhcCC
Confidence            6999995 999999999998764 33             77777665544433322 26778999999999999999999


Q ss_pred             CEEEEcCcc
Q 028444           67 HVIFHTAAL   75 (209)
Q Consensus        67 d~vi~~a~~   75 (209)
                      |+||++...
T Consensus       650 DaVIsalP~  658 (1042)
T PLN02819        650 DVVISLLPA  658 (1042)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.70  E-value=0.00027  Score=57.68  Aligned_cols=99  Identities=25%  Similarity=0.248  Sum_probs=57.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCC-CceEEE-EccCCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSE-GALELV-YGDVTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~-~~~~~~-~~Dl~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      |+|.|+||||++|+.+++.|.+. +++++.+.++....+.+... ..+..+ ..++.+.+..  ...++|+|+-|...  
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~--   78 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH--   78 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc--
Confidence            48999999999999999999876 57887776643222222110 111111 1123333332  45779999887652  


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceee
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~  119 (209)
                                    .....++..+.+.+  .++|-.|+..-+
T Consensus        79 --------------~~~~~~v~~a~~aG--~~VID~S~~fR~  104 (343)
T PRK00436         79 --------------GVSMDLAPQLLEAG--VKVIDLSADFRL  104 (343)
T ss_pred             --------------HHHHHHHHHHHhCC--CEEEECCcccCC
Confidence                          11233444454442  578888875443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.70  E-value=0.0013  Score=46.11  Aligned_cols=101  Identities=12%  Similarity=0.199  Sum_probs=65.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCC---CCC--C-CC--------------------CCceEEEEccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSD---ISG--L-PS--------------------EGALELVYGDV   53 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~---~~~--~-~~--------------------~~~~~~~~~Dl   53 (209)
                      .+|+|.| .|.+|+.+++.|...|. ++++++...-.   +.+  + ..                    ...++.+..++
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            3789988 69999999999999996 68888764321   111  1 00                    02345555565


Q ss_pred             CCHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        54 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                       +.+...++++++|+||.+..               |...-..+.+.|++..  ..+|+.+....+|
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d---------------~~~~~~~l~~~~~~~~--~p~i~~~~~g~~G  130 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVD---------------SLAARLLLNEICREYG--IPFIDAGVNGFYG  130 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESS---------------SHHHHHHHHHHHHHTT---EEEEEEEETTEE
T ss_pred             -ccccccccccCCCEEEEecC---------------CHHHHHHHHHHHHHcC--CCEEEEEeecCEE
Confidence             45667777889999998854               1334556777788773  3677777654443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.69  E-value=6.3e-05  Score=60.42  Aligned_cols=34  Identities=21%  Similarity=0.387  Sum_probs=31.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      |+|.|+| .|.+|..++..|+++|++|++++|++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            5899999 899999999999999999999999864

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.69  E-value=0.00027  Score=59.22  Aligned_cols=107  Identities=19%  Similarity=0.105  Sum_probs=70.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC---C----CeEEEEEcC--CCCCCCC---------CCCCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLKQ---G----HSVRALVRR--TSDISGL---------PSEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~---g----~~V~~~~r~--~~~~~~~---------~~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      +|+||||+|.||.+++-++++=   |    ..+.+++..  .+.++-.         +-...+.+.. |  +    ...+
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~--~----~ea~  197 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D--L----DVAF  197 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C--C----HHHh
Confidence            6999999999999999988541   2    235555552  2221110         0001222221 1  1    3567


Q ss_pred             cCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEcc
Q 028444           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSS  115 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss  115 (209)
                      +++|++|-.||..+....+..+.++.|..-...+.+.+.+... -.+++.+.|
T Consensus       198 ~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         198 KDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            8999999999986555456677899999999999999988743 145555554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.64  E-value=0.00026  Score=57.79  Aligned_cols=98  Identities=21%  Similarity=0.216  Sum_probs=55.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEE-EcCCCCCCCCCC-CCceEEE-EccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDISGLPS-EGALELV-YGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~-~r~~~~~~~~~~-~~~~~~~-~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |+|.|.||||++|+.+++.|.+. +.++..+ .++....+.+.. ...+... ..++.+. +..++.+++|+|+-|.+.-
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~   79 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG   79 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence            79999999999999999999877 4677744 433211111110 0111111 1112211 1233445899999887620


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccce
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~  117 (209)
                                      ....++..+.+.+  .++|-.|+..
T Consensus        80 ----------------~s~~~~~~~~~~G--~~VIDlS~~f  102 (346)
T TIGR01850        80 ----------------VSAELAPELLAAG--VKVIDLSADF  102 (346)
T ss_pred             ----------------HHHHHHHHHHhCC--CEEEeCChhh
Confidence                            2444555555442  5788888754

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.62  E-value=0.00087  Score=52.46  Aligned_cols=67  Identities=25%  Similarity=0.253  Sum_probs=45.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEE-cCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALV-RRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+|.|+|++|.+|+.+++.+.+. +.++..+. ++..+.... .       ..++...+++.++++++|+||.++.+
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-~-------~~~i~~~~dl~~ll~~~DvVid~t~p   70 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-G-------ALGVAITDDLEAVLADADVLIDFTTP   70 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-C-------CCCccccCCHHHhccCCCEEEECCCH
Confidence            69999999999999999988764 68887755 443332221 1       12333334455556689999988753

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.61  E-value=0.0015  Score=49.12  Aligned_cols=103  Identities=17%  Similarity=0.169  Sum_probs=62.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcC---CCCCCCCC---C-------------------CCceEEEEccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR---TSDISGLP---S-------------------EGALELVYGDVTD   55 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~~---~-------------------~~~~~~~~~Dl~~   55 (209)
                      +|+|.|+ |++|+.++..|++.|. ++++++++   ...+.+..   .                   ...++.+..+++ 
T Consensus        23 ~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i~-  100 (200)
T TIGR02354        23 TVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKIT-  100 (200)
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeCC-
Confidence            6899995 8899999999999997 69998887   33332210   0                   013344444553 


Q ss_pred             HHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc
Q 028444           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (209)
Q Consensus        56 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~  121 (209)
                      .+.+.++++++|+||.+..               |...-..+.+.+.+..+...++..|....|+.
T Consensus       101 ~~~~~~~~~~~DlVi~a~D---------------n~~~k~~l~~~~~~~~~~~~ii~~~g~~g~~~  151 (200)
T TIGR02354       101 EENIDKFFKDADIVCEAFD---------------NAEAKAMLVNAVLEKYKDKYLIAASGLAGYDD  151 (200)
T ss_pred             HhHHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHHcCCCcEEEEeccccCCC
Confidence            4556667788888887721               12223344555655534445666555555553

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.60  E-value=0.00064  Score=56.13  Aligned_cols=53  Identities=19%  Similarity=0.257  Sum_probs=42.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.||.|.+|..+++.|.+.|++|++.+|+..                     +....++.++|+||-|..
T Consensus        99 ~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~---------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         99 RPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW---------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             ceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc---------------------hhHHHHHhcCCEEEEeCc
Confidence            47999999999999999999999999999987421                     122345677888887765

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.57  E-value=0.002  Score=45.62  Aligned_cols=99  Identities=19%  Similarity=0.235  Sum_probs=61.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC--------------------------CCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~Dl~   54 (209)
                      +|+|.|+ |.+|+++++.|...|. ++++++.+.-....+..                          .-.++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5889995 9999999999999996 68888765321111100                          012334444444


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceee
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~  119 (209)
                      +. .....+++.|+||.+..               |......+.+.|++..  ..+|..++....
T Consensus        80 ~~-~~~~~~~~~diVi~~~d---------------~~~~~~~l~~~~~~~~--i~~i~~~~~g~~  126 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAID---------------NIAVRRALNRACKELG--IPVIDAGGLGLG  126 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEcCCCcE
Confidence            33 23566778888887754               1344666778888763  456766665433

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.55  E-value=0.00085  Score=54.62  Aligned_cols=67  Identities=16%  Similarity=0.258  Sum_probs=44.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEE---EEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVR---ALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +|.|.||||++|+.+++.|.++++.+.   .+.+.....+.+.. .+.+....|+. .    ..++++|+||-+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~-~~~~~~~~~~~-~----~~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTF-KGKELEVNEAK-I----ESFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeee-CCeeEEEEeCC-h----HHhcCCCEEEECCC
Confidence            589999999999999999999877643   44454332222221 23455666664 1    23478899998887

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.55  E-value=0.0047  Score=52.23  Aligned_cols=120  Identities=13%  Similarity=0.073  Sum_probs=69.5

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCCCCc
Q 028444            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDP   83 (209)
Q Consensus         4 lItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~   83 (209)
                      +|+||+|.+|.++++.|...|.+|+...+...+..... ..++.-+..|.+..+...+                      
T Consensus        42 ~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~----------------------   98 (450)
T PRK08261         42 VLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGITDPAD----------------------   98 (450)
T ss_pred             eEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCCCCHHH----------------------
Confidence            38889999999999999999999998765544221111 1133333334433222111                      


Q ss_pred             cchhhhHHHHHHHHHHHHHhc-CCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh---hc
Q 028444           84 SRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA---SE  159 (209)
Q Consensus        84 ~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~---~~  159 (209)
                             +.+....++...+. ....+||+++|......   .              ..|+.+|+..+.+.+.++   ++
T Consensus        99 -------l~~~~~~~~~~l~~l~~~griv~i~s~~~~~~---~--------------~~~~~akaal~gl~rsla~E~~~  154 (450)
T PRK08261         99 -------LKALYEFFHPVLRSLAPCGRVVVLGRPPEAAA---D--------------PAAAAAQRALEGFTRSLGKELRR  154 (450)
T ss_pred             -------HHHHHHHHHHHHHhccCCCEEEEEccccccCC---c--------------hHHHHHHHHHHHHHHHHHHHhhc
Confidence                   22233344433332 22358999998644311   0              128888886655555443   45


Q ss_pred             CCCEEEEecCc
Q 028444          160 GLPIVPVYPGV  170 (209)
Q Consensus       160 ~~~~~~~rp~~  170 (209)
                      +++++.+.|+.
T Consensus       155 gi~v~~i~~~~  165 (450)
T PRK08261        155 GATAQLVYVAP  165 (450)
T ss_pred             CCEEEEEecCC
Confidence            78898888764

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.54  E-value=0.00058  Score=51.45  Aligned_cols=100  Identities=17%  Similarity=0.138  Sum_probs=63.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCC--------------------------CCCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL--------------------------PSEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+.+++.|...|. ++++++++.-+...+                          ...-.++.+..++ 
T Consensus        23 ~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-  100 (202)
T TIGR02356        23 HVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-  100 (202)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-
Confidence            689998 79999999999999996 888888763211111                          0101233333344 


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      +.+.+.+.+++.|+||.+..               |...-..+.+.|++..  ..+|+.+....+|
T Consensus       101 ~~~~~~~~~~~~D~Vi~~~d---------------~~~~r~~l~~~~~~~~--ip~i~~~~~g~~G  149 (202)
T TIGR02356       101 TAENLELLINNVDLVLDCTD---------------NFATRYLINDACVALG--TPLISAAVVGFGG  149 (202)
T ss_pred             CHHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEeccCeE
Confidence            34556777889999998753               1233445667777763  3577776554444

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.51  E-value=0.00027  Score=59.15  Aligned_cols=74  Identities=27%  Similarity=0.324  Sum_probs=49.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CceEE-----E-EccCCCHHHHHHHhcCcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALEL-----V-YGDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~~-----~-~~Dl~~~~~~~~~~~~~d~   68 (209)
                      |+|.|+| .|.+|..++..|++.|++|+++++++.+.+.+...      ++++-     + .+-++-..+..++++++|+
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            8999998 79999999999999999999999987765443321      00000     0 0001111123455678999


Q ss_pred             EEEcCcc
Q 028444           69 IFHTAAL   75 (209)
Q Consensus        69 vi~~a~~   75 (209)
                      ||-+.+.
T Consensus        80 vii~vpt   86 (411)
T TIGR03026        80 IIICVPT   86 (411)
T ss_pred             EEEEeCC
Confidence            9988764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.51  E-value=0.00032  Score=56.14  Aligned_cols=105  Identities=21%  Similarity=0.243  Sum_probs=68.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCCC-----CceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |.|+|+ |.+|..++..|+..|. +|++++++++.++.    +...     ....+ ... .|.    +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d~----~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-NDY----EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CCH----HHhCCCCEEEEe
Confidence            468897 9999999999988875 99999988653211    0000     01111 110 122    346899999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ++.......+..+.+..|+.-...+++.+.+......+|.+|
T Consensus        74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            996533333334566778888888888888775334455555

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.50  E-value=0.00016  Score=61.03  Aligned_cols=72  Identities=24%  Similarity=0.306  Sum_probs=57.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHH-hcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   73 (209)
                      ++++|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+... .++..+.+|.++.+.+.++ ++++|.||-+.
T Consensus       232 ~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        232 KRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALT  305 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence            47999996 9999999999999999999999887654433322 3678899999999888664 36789888554

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.49  E-value=0.0017  Score=52.74  Aligned_cols=93  Identities=19%  Similarity=0.262  Sum_probs=52.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC---eEEEEEcCCCCCC-CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |+|.|+||||++|+.+++.|.++++   ++..+... .... .+.. .+.   ..++.+.+.. + ++++|+|+-+.+. 
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~~-~~~---~l~~~~~~~~-~-~~~vD~vFla~p~-   76 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVPF-AGK---NLRVREVDSF-D-FSQVQLAFFAAGA-   76 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeecc-CCc---ceEEeeCChH-H-hcCCCEEEEcCCH-
Confidence            4799999999999999999997664   33344322 2211 1111 121   2233322221 2 4789999987652 


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcccee
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA  118 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~  118 (209)
                                     .....++..+.+.+  .++|-.|+..-
T Consensus        77 ---------------~~s~~~v~~~~~~G--~~VIDlS~~fR  101 (336)
T PRK05671         77 ---------------AVSRSFAEKARAAG--CSVIDLSGALP  101 (336)
T ss_pred             ---------------HHHHHHHHHHHHCC--CeEEECchhhc
Confidence                           01233555555543  36777777543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.48  E-value=0.00016  Score=55.19  Aligned_cols=37  Identities=32%  Similarity=0.363  Sum_probs=34.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      |||.|+||+|.+|+++++.|.+.|++|.+.+|++++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            8999999999999999999999999999999876544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.47  E-value=0.0005  Score=55.27  Aligned_cols=70  Identities=21%  Similarity=0.251  Sum_probs=46.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC-HHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|+||+|.+|+++++.+...|.+|+++.+++++.+.+... +...+. |..+ .+.+.+. .++|+++++++
T Consensus       165 ~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~d~v~~~~g  235 (332)
T cd08259         165 TVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKEL-GADYVI-DGSKFSEDVKKL-GGADVVIELVG  235 (332)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHc-CCcEEE-ecHHHHHHHHhc-cCCCEEEECCC
Confidence            689999999999999999999999999998876543322111 221111 2221 1222222 37899999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.47  E-value=0.0036  Score=47.04  Aligned_cols=102  Identities=21%  Similarity=0.277  Sum_probs=61.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC----------------------------CCCceEEEEcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP----------------------------SEGALELVYGD   52 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~----------------------------~~~~~~~~~~D   52 (209)
                      +|+|.|+ |++|.++++.|+..|. ++++++.+.-....+.                            +.-+++.+..+
T Consensus        21 ~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~   99 (198)
T cd01485          21 KVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEED   99 (198)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecc
Confidence            6899986 4599999999999995 5888876532111110                            11233444444


Q ss_pred             CCC-HHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc
Q 028444           53 VTD-YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (209)
Q Consensus        53 l~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~  121 (209)
                      +.+ .+...+.++++|+||.+-.               +......+-+.|++..  ..+|+.++...||.
T Consensus       100 ~~~~~~~~~~~~~~~dvVi~~~d---------------~~~~~~~ln~~c~~~~--ip~i~~~~~G~~G~  152 (198)
T cd01485         100 SLSNDSNIEEYLQKFTLVIATEE---------------NYERTAKVNDVCRKHH--IPFISCATYGLIGY  152 (198)
T ss_pred             cccchhhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEeecCEEE
Confidence            432 3445566677888885522               2333455667787763  46777777666654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.46  E-value=0.00042  Score=54.96  Aligned_cols=161  Identities=12%  Similarity=0.067  Sum_probs=98.2

Q ss_pred             EEEEcC-CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHH-------HHHhcCc------
Q 028444            3 ILVSGA-SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSL-------VDACFGC------   66 (209)
Q Consensus         3 ilItG~-~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~-------~~~~~~~------   66 (209)
                      |+|.|. +--+++.++.-|-++||-|++...+.++.+....  ...+.....|..+..++       .+.++..      
T Consensus         6 VvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~   85 (299)
T PF08643_consen    6 VVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPG   85 (299)
T ss_pred             EEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCC
Confidence            788885 6889999999999999999999887654332222  23456666676554333       2233321      


Q ss_pred             --CEEEEcCcc---------CCC----CCCCccchhhhHHHHHHHHHHHHHhcC-----CccEEEEEccceeeccCCccc
Q 028444           67 --HVIFHTAAL---------VEP----WLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYI  126 (209)
Q Consensus        67 --d~vi~~a~~---------~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~ss~~~~~~~~~~~  126 (209)
                        -...++.+.         ..+    ..+.|.+.+..|+..+...++.+.+..     ...++|.+.-.....-..++.
T Consensus        86 ~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~Pfh  165 (299)
T PF08643_consen   86 APPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFH  165 (299)
T ss_pred             CCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCcc
Confidence              122333331         111    223566778889999998888886542     234565554322221111111


Q ss_pred             cCCCccccccccCChHHHHHHHHHHHHHHHhhcCCCEEEEecCcee
Q 028444          127 ADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY  172 (209)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~  172 (209)
                      ..|         ...-++-+.+.+.+.+|..+.+++|+.++.|.+.
T Consensus       166 spE---------~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~  202 (299)
T PF08643_consen  166 SPE---------SIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLD  202 (299)
T ss_pred             CHH---------HHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeec
Confidence            111         0124556778888999888889999999999875

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.44  E-value=0.00042  Score=60.72  Aligned_cols=70  Identities=21%  Similarity=0.314  Sum_probs=57.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   73 (209)
                      +++|.| .|-+|+.+++.|.++|++++++++++++.+...+ .+...+.+|.++++.++++ ++++|.+|-+-
T Consensus       402 ~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        402 QVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-YGYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             CEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-CCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            577877 6999999999999999999999998876655433 4788999999999988875 46788888654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.44  E-value=0.0038  Score=48.36  Aligned_cols=100  Identities=19%  Similarity=0.229  Sum_probs=60.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--ceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+.+++.|+..| -++++++.+.-+...+..+                        +  .++.+...+ 
T Consensus        26 ~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i-  103 (240)
T TIGR02355        26 RVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL-  103 (240)
T ss_pred             cEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC-
Confidence            688888 6999999999999999 4777777654322221110                        1  233333333 


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      +.+.+.+++++.|+||.+..               |...-..+.++|.+..  ..+|+.++...+|
T Consensus       104 ~~~~~~~~~~~~DlVvd~~D---------------~~~~r~~ln~~~~~~~--ip~v~~~~~g~~G  152 (240)
T TIGR02355       104 DDAELAALIAEHDIVVDCTD---------------NVEVRNQLNRQCFAAK--VPLVSGAAIRMEG  152 (240)
T ss_pred             CHHHHHHHhhcCCEEEEcCC---------------CHHHHHHHHHHHHHcC--CCEEEEEecccEe
Confidence            23456667778888887753               2233455667777763  4566665544444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.41  E-value=0.0032  Score=48.38  Aligned_cols=99  Identities=14%  Similarity=0.161  Sum_probs=61.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC--------------------------CCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------------------------SEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------------------------~~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+++++.|+..|. ++++++.+.-....+.                          ..-+++.+..++ 
T Consensus        23 ~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-  100 (228)
T cd00757          23 RVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-  100 (228)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-
Confidence            689998 79999999999999995 6777755421111110                          001344444455 


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceee
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~  119 (209)
                      +.+.+.+.++++|+||.|...               ...-..+.+.|.+..  ..+|+.+....+
T Consensus       101 ~~~~~~~~~~~~DvVi~~~d~---------------~~~r~~l~~~~~~~~--ip~i~~g~~g~~  148 (228)
T cd00757         101 DAENAEELIAGYDLVLDCTDN---------------FATRYLINDACVKLG--KPLVSGAVLGFE  148 (228)
T ss_pred             CHHHHHHHHhCCCEEEEcCCC---------------HHHHHHHHHHHHHcC--CCEEEEEeccCE
Confidence            345667778889999988641               122345667777663  456666554433

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK04148 hypothetical protein; Provisional

Probab=97.40  E-value=0.00015  Score=50.57  Aligned_cols=67  Identities=15%  Similarity=0.188  Sum_probs=51.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |++++.|. | -|..+++.|.+.|++|++++.++...+.... ..++.+.+|+.+++  ..+-+++|.|.-+
T Consensus        18 ~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf~p~--~~~y~~a~liysi   84 (134)
T PRK04148         18 KKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLFNPN--LEIYKNAKLIYSI   84 (134)
T ss_pred             CEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCCCCC--HHHHhcCCEEEEe
Confidence            46899994 5 8899999999999999999998775443322 36789999999876  3445678877744

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.38  E-value=0.0043  Score=50.63  Aligned_cols=68  Identities=16%  Similarity=0.249  Sum_probs=40.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC---eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.||||++|+.+++.|.++++   ++..+......-+.... .+.+....++. .    ..+.++|+||-+++
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~~~~~~v~~~~-~----~~~~~~D~vf~a~p   78 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-EGRDYTVEELT-E----DSFDGVDIALFSAG   78 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-cCceeEEEeCC-H----HHHcCCCEEEECCC
Confidence            5899999999999999999988776   34333322111111111 12233333332 2    23478999998876

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.38  E-value=4.2e-05  Score=56.82  Aligned_cols=37  Identities=38%  Similarity=0.540  Sum_probs=29.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (209)
                      |||-|+| .|++|..++..|++.|++|++++.++.+.+
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~   37 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVE   37 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHH
Confidence            8999997 899999999999999999999998876433

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.36  E-value=0.00068  Score=53.71  Aligned_cols=66  Identities=29%  Similarity=0.419  Sum_probs=45.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.| .|.+|..++..|.+.|++|++++|+++..+.......+..   .-++.    +.++++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~---~~~~~----~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDE---ASTDL----SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCccc---ccCCH----hHhcCCCEEEEcCC
Confidence            8999998 7999999999999999999999987654333222111110   01111    24578899998865

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.35  E-value=0.0033  Score=50.47  Aligned_cols=101  Identities=21%  Similarity=0.261  Sum_probs=61.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC--------------------------CCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|.++++.|+..|. ++++++.+.-+...+..                          .-.++.+..++.
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            589999 49999999999999994 67777764322111111                          023455556666


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      +.....+.+++.|+||.+..               |..+-..+-+.|....  ..+|..++.+.+|
T Consensus        80 ~~~~~~~f~~~~DvVv~a~D---------------n~~ar~~in~~c~~~~--ip~I~~gt~G~~G  128 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALD---------------NLAARRHVNKMCLAAD--VPLIESGTTGFLG  128 (312)
T ss_pred             CccchHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHCC--CCEEEEecCccee
Confidence            54333456677888886642               2344555666777663  3566666554443

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.35  E-value=0.00012  Score=57.94  Aligned_cols=69  Identities=22%  Similarity=0.231  Sum_probs=47.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCC-ceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |++|++++..|...| .+|+++.|+.++.+.+.... ....+..++    +..+.+.++|+||++...
T Consensus       125 ~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~~~~~DivInaTp~  195 (278)
T PRK00258        125 RILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQEELADFDLIINATSA  195 (278)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhccccCCEEEECCcC
Confidence            6899996 999999999999999 79999999876554332210 000011111    123456789999999764

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.34  E-value=0.0038  Score=49.64  Aligned_cols=173  Identities=9%  Similarity=-0.032  Sum_probs=100.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      +++.|+|+.| +|+--++.-.+-|++|++++++..+.++.-+.-+.+++..-..|++.++++.+-.|.++|+..-+.   
T Consensus       183 ~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a---  258 (360)
T KOG0023|consen  183 KWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLA---  258 (360)
T ss_pred             cEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeecc---
Confidence            3688999888 998887877788999999999875444333333677766444488888888777777777765220   


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                      +.          +...+++.++..   .++|+++--..+-..+-.+.   ..... .....+--+...+++++...++..
T Consensus       259 ~~----------~~~~~~~~lk~~---Gt~V~vg~p~~~~~~~~~~l---il~~~-~I~GS~vG~~ket~E~Ldf~a~~~  321 (360)
T KOG0023|consen  259 EH----------ALEPLLGLLKVN---GTLVLVGLPEKPLKLDTFPL---ILGRK-SIKGSIVGSRKETQEALDFVARGL  321 (360)
T ss_pred             cc----------chHHHHHHhhcC---CEEEEEeCcCCcccccchhh---hcccE-EEEeeccccHHHHHHHHHHHHcCC
Confidence            00          122344555543   48888864322111000000   00000 001123345567777777767665


Q ss_pred             CCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeee
Q 028444          161 LPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITC  206 (209)
Q Consensus       161 ~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  206 (209)
                      ++.-+          ..-.-+.++..+.++..++-.++|  +-|+.
T Consensus       322 ik~~I----------E~v~~~~v~~a~erm~kgdV~yRf--VvD~s  355 (360)
T KOG0023|consen  322 IKSPI----------ELVKLSEVNEAYERMEKGDVRYRF--VVDVS  355 (360)
T ss_pred             CcCce----------EEEehhHHHHHHHHHHhcCeeEEE--EEEcc
Confidence            44322          100124478888889989988888  34444

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.34  E-value=0.00064  Score=59.11  Aligned_cols=69  Identities=19%  Similarity=0.247  Sum_probs=56.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~   72 (209)
                      +++|.| .|-+|+.++++|.++|++|+++++++++.++..+ .+...+.+|.+|++.++++- +++|.++-+
T Consensus       419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-RGIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            367887 6999999999999999999999998776655543 47999999999998887753 578877644

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.33  E-value=0.00035  Score=57.56  Aligned_cols=72  Identities=14%  Similarity=0.151  Sum_probs=53.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |-+|+..++.|...|.+|++++|+..+.+.+....+. .+..+..+.+.+.+.+.++|+||+++..
T Consensus       169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       169 DVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG-RIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc-eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            5888885 8999999999999999999999876544332221111 2334566778888888999999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08328 hypothetical protein; Provisional

Probab=97.30  E-value=0.0054  Score=47.21  Aligned_cols=101  Identities=21%  Similarity=0.218  Sum_probs=59.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC---------------------------CCCceEEEEccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP---------------------------SEGALELVYGDV   53 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~---------------------------~~~~~~~~~~Dl   53 (209)
                      +|+|.| .|++|+++++.|+..|. ++++++.+.-+...+.                           +.-.++.+...+
T Consensus        29 ~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~  107 (231)
T PRK08328         29 KVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL  107 (231)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence            688988 69999999999999994 6777765432211111                           001233333333


Q ss_pred             CCHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc
Q 028444           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (209)
Q Consensus        54 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~  121 (209)
                       +.+.+.+++++.|+||.+..               |...-..+.+.|++..  ..+|+.++...+|.
T Consensus       108 -~~~~~~~~l~~~D~Vid~~d---------------~~~~r~~l~~~~~~~~--ip~i~g~~~g~~G~  157 (231)
T PRK08328        108 -SEENIDEVLKGVDVIVDCLD---------------NFETRYLLDDYAHKKG--IPLVHGAVEGTYGQ  157 (231)
T ss_pred             -CHHHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEeeccCEEE
Confidence             23345556667777776643               2233344556677663  45777776666654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.29  E-value=0.00023  Score=53.59  Aligned_cols=65  Identities=17%  Similarity=0.190  Sum_probs=43.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~   74 (209)
                      |+++|+|. |.+|+.+++.|.+.|++|++.+++.++...+.+..+.+.+  |.   +   +++ .++|+++.+|.
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~---~---~l~~~~~Dv~vp~A~   94 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP---E---EIYSVDADVFAPCAL   94 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc---h---hhccccCCEEEeccc
Confidence            57999996 7999999999999999999888876543332221122222  21   1   222 26899998875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.29  E-value=0.0054  Score=47.16  Aligned_cols=31  Identities=23%  Similarity=0.308  Sum_probs=26.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~   33 (209)
                      +|+|.| .|++|+++++.|++.|. ++++++..
T Consensus        13 ~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          13 HVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            689998 69999999999999994 78887754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.29  E-value=0.017  Score=49.92  Aligned_cols=161  Identities=20%  Similarity=0.172  Sum_probs=92.8

Q ss_pred             EEEEcCCC-hhHHHHHHHHHhCCCeEEEEEcCCCC--CCCCC-------CCC-ceEEEEccCC---CHHHHHHHhc----
Q 028444            3 ILVSGASG-YLGGRLCHALLKQGHSVRALVRRTSD--ISGLP-------SEG-ALELVYGDVT---DYRSLVDACF----   64 (209)
Q Consensus         3 ilItG~~G-~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~-------~~~-~~~~~~~Dl~---~~~~~~~~~~----   64 (209)
                      ++||||+- .||.+++++|+.-|.+|++.+.+-.+  .+-.+       ... .+-++..++.   |.+.+.+.+.    
T Consensus       399 alVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~  478 (866)
T COG4982         399 ALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQT  478 (866)
T ss_pred             EEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccc
Confidence            79999875 69999999999999999998654331  11000       001 2233344554   4444444331    


Q ss_pred             --------------CcCEEEEcCccCCC---CCCCc--cchhhhHHHHHHHHHHHHHhcCCc------cEEEEEccceee
Q 028444           65 --------------GCHVIFHTAALVEP---WLPDP--SRFFAVNVEGLKNVVQAAKETKTV------EKIIYTSSFFAL  119 (209)
Q Consensus        65 --------------~~d~vi~~a~~~~~---~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~------~~~i~~ss~~~~  119 (209)
                                    .+|.+|-.|++...   ...++  +..+++-+....+++-.+++.+..      -++|.-+|-. .
T Consensus       479 ~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPN-r  557 (866)
T COG4982         479 ETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPN-R  557 (866)
T ss_pred             cccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCC-C
Confidence                          14678888876311   11122  234666677788888887766321      1244433310 0


Q ss_pred             ccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh-c----CCCEEEEecCceecCCCCC
Q 028444          120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-E----GLPIVPVYPGVIYGPGKLT  178 (209)
Q Consensus       120 ~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-~----~~~~~~~rp~~v~g~~~~~  178 (209)
                      |...+              -..|+.+|...+.+...|.. .    .+.++-.+.||+-|-+.++
T Consensus       558 G~FGg--------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg  607 (866)
T COG4982         558 GMFGG--------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMG  607 (866)
T ss_pred             CccCC--------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccC
Confidence            10000              14599999999988887753 2    2455556677777665443

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.29  E-value=0.0012  Score=53.46  Aligned_cols=71  Identities=21%  Similarity=0.276  Sum_probs=46.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~d~vi~~a~   74 (209)
                      ++||+||+|++|...++-+...|+.++++..++++.+.+.+ .+...+. |..+.   +.++++..  ++|+|+..-|
T Consensus       145 ~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~-lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         145 TVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE-LGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh-cCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            69999999999999999988999777776665554432222 2332222 23332   23334443  5999998877

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.27  E-value=0.0033  Score=50.51  Aligned_cols=33  Identities=33%  Similarity=0.500  Sum_probs=30.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|.|.| +|-+|+++++.|.+.|++|.+.+|+.
T Consensus         5 m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          5 KTIAILG-AGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            7899998 69999999999999999999998864

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.27  E-value=0.0075  Score=48.78  Aligned_cols=161  Identities=14%  Similarity=0.020  Sum_probs=95.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~   81 (209)
                      +++|+|.. ++|...++.+...|.+|++++|++++++...+. +...+. |-+|.+.+..+.+.+|++|.+++ ...   
T Consensus       169 ~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l-GAd~~i-~~~~~~~~~~~~~~~d~ii~tv~-~~~---  241 (339)
T COG1064         169 WVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL-GADHVI-NSSDSDALEAVKEIADAIIDTVG-PAT---  241 (339)
T ss_pred             EEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh-CCcEEE-EcCCchhhHHhHhhCcEEEECCC-hhh---
Confidence            68999975 999999998888999999999998876433332 333333 22256555555555999999987 111   


Q ss_pred             CccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCcc-----ccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY-----IADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~-----~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                                  ....++.+++.   .+++.++-.. -.+....     ...+-..      ...+.-++...++++...
T Consensus       242 ------------~~~~l~~l~~~---G~~v~vG~~~-~~~~~~~~~~~li~~~~~i------~GS~~g~~~d~~e~l~f~  299 (339)
T COG1064         242 ------------LEPSLKALRRG---GTLVLVGLPG-GGPIPLLPAFLLILKEISI------VGSLVGTRADLEEALDFA  299 (339)
T ss_pred             ------------HHHHHHHHhcC---CEEEEECCCC-CcccCCCCHHHhhhcCeEE------EEEecCCHHHHHHHHHHH
Confidence                        22233444433   4788776432 0000000     0111100      112334566777777777


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEE
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFF  200 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (209)
                      ++.+++..+.   -.+.      -+.+++.+..+.+++....++
T Consensus       300 ~~g~Ikp~i~---e~~~------l~~in~A~~~m~~g~v~gR~V  334 (339)
T COG1064         300 AEGKIKPEIL---ETIP------LDEINEAYERMEKGKVRGRAV  334 (339)
T ss_pred             HhCCceeeEE---eeEC------HHHHHHHHHHHHcCCeeeEEE
Confidence            7777654443   1233      245788888888888776663

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.25  E-value=0.00048  Score=54.74  Aligned_cols=66  Identities=17%  Similarity=0.241  Sum_probs=47.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|+|. |.+|+.+++.|...|++|++..|+..+...... .+...+     +.+++.+.+.++|+||++..
T Consensus       153 ~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       153 NVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             EEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeee-----cHHHHHHHhccCCEEEECCC
Confidence            6899996 889999999999999999999997654322111 122211     24456677889999999864

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.24  E-value=0.0062  Score=47.31  Aligned_cols=96  Identities=20%  Similarity=0.258  Sum_probs=59.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCC--------------------------CCCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL--------------------------PSEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~Dl~   54 (209)
                      +|+|.|+ |++|+.+++.|+..|. ++++++.+.-+...+                          .+.-.++.+...++
T Consensus        34 ~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i~  112 (245)
T PRK05690         34 RVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARLD  112 (245)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            6899996 9999999999999994 777776643211111                          00123344444443


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                       .+.+.+.++++|+||.+..               |...-..+.+.|.+..  ..+|+.++.
T Consensus       113 -~~~~~~~~~~~DiVi~~~D---------------~~~~r~~ln~~~~~~~--ip~v~~~~~  156 (245)
T PRK05690        113 -DDELAALIAGHDLVLDCTD---------------NVATRNQLNRACFAAK--KPLVSGAAI  156 (245)
T ss_pred             -HHHHHHHHhcCCEEEecCC---------------CHHHHHHHHHHHHHhC--CEEEEeeec
Confidence             4456667888999998753               1223345667777763  356665443

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.24  E-value=0.0056  Score=44.98  Aligned_cols=102  Identities=17%  Similarity=0.243  Sum_probs=60.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC-------------------------CCCceEEEEccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-------------------------SEGALELVYGDVTD   55 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-------------------------~~~~~~~~~~Dl~~   55 (209)
                      +|+|.| .|++|+.+++.|...|. ++++++.+.-....+.                         ...+++.+...++ 
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            588999 59999999999999996 5999887642111111                         0023334444443 


Q ss_pred             HHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc
Q 028444           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (209)
Q Consensus        56 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~  121 (209)
                      .+.+.+.++++|+||.+..               |...-..+.+.+.+.. ...+|+.+....|+.
T Consensus        79 ~~~~~~~l~~~DlVi~~~d---------------~~~~r~~i~~~~~~~~-~ip~i~~~~~~~~~~  128 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFD---------------NAETKAMLAESLLGNK-NKPVVCASGMAGFGD  128 (174)
T ss_pred             hhhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHHC-CCCEEEEehhhccCC
Confidence            3445667778888887732               1222344566666552 245666555444444

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.23  E-value=0.0013  Score=52.53  Aligned_cols=68  Identities=18%  Similarity=0.325  Sum_probs=47.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|-+|.++++.|.+.|++|.+.+|++++.+.+.+. +..    ...+.+++.+.+.++|+|+-+..
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~-g~~----~~~s~~~~~~~~~~~dvIi~~vp   68 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKED-RTT----GVANLRELSQRLSAPRVVWVMVP   68 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCc----ccCCHHHHHhhcCCCCEEEEEcC
Confidence            8999999 69999999999999999999999987654433321 111    12344455555566787776643

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK08223 hypothetical protein; Validated

Probab=97.23  E-value=0.007  Score=47.90  Aligned_cols=97  Identities=11%  Similarity=0.098  Sum_probs=58.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC--------------------------CCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+.+++.|+..|. ++++++.+.-+...+..                          .-+++.+...++
T Consensus        29 ~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~  107 (287)
T PRK08223         29 RVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG  107 (287)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            689998 59999999999999994 67777765322111110                          023444444444


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                       .+.+.++++++|+||.+...       +      ++..-..+.++|.+..  ..+|+.+.
T Consensus       108 -~~n~~~ll~~~DlVvD~~D~-------~------~~~~r~~ln~~c~~~~--iP~V~~~~  152 (287)
T PRK08223        108 -KENADAFLDGVDVYVDGLDF-------F------EFDARRLVFAACQQRG--IPALTAAP  152 (287)
T ss_pred             -ccCHHHHHhCCCEEEECCCC-------C------cHHHHHHHHHHHHHcC--CCEEEEec
Confidence             33456667788888855321       0      1233456677888773  35666543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.21  E-value=0.00035  Score=51.54  Aligned_cols=65  Identities=18%  Similarity=0.197  Sum_probs=43.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|-||++++++|..-|++|++.+|.......... .++        ...++.+++.++|+|+.+...
T Consensus        37 ~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~--------~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   37 KTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGV--------EYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             SEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTE--------EESSHHHHHHH-SEEEE-SSS
T ss_pred             CEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-ccc--------eeeehhhhcchhhhhhhhhcc
Confidence            3688998 7999999999999999999999997653210000 011        122456678889999888764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=97.20  E-value=0.0041  Score=50.07  Aligned_cols=63  Identities=17%  Similarity=0.278  Sum_probs=46.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++.|.| .|.||+.+++.|..-|++|++.+|...+..      ++...    ...+++.++++++|+|+.+..
T Consensus       137 ~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~----~~~~~l~e~l~~aDvvv~~lP  199 (312)
T PRK15469        137 FTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSF----AGREELSAFLSQTRVLINLLP  199 (312)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceee----cccccHHHHHhcCCEEEECCC
Confidence            3678888 799999999999999999999987543321      11111    134567888999999988865

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.20  E-value=0.0017  Score=47.47  Aligned_cols=52  Identities=21%  Similarity=0.333  Sum_probs=43.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+++.+|..+++.|.++|.+|+++.|+.                      +++.+.+.++|+||.+.+.
T Consensus        46 ~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          46 KVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             EEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence            799999877789999999999999998888752                      2445678899999988774

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.20  E-value=0.0076  Score=45.77  Aligned_cols=102  Identities=19%  Similarity=0.284  Sum_probs=61.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC-------------------------CCceEEEEccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS-------------------------EGALELVYGDVTD   55 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-------------------------~~~~~~~~~Dl~~   55 (209)
                      +|+|.| .|++|+.+++.|...|. ++++++.+.-....+..                         ...++.+...+++
T Consensus        30 ~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~  108 (212)
T PRK08644         30 KVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKIDE  108 (212)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecCH
Confidence            689998 59999999999999995 58888876321111110                         0123333334433


Q ss_pred             HHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc
Q 028444           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (209)
Q Consensus        56 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~  121 (209)
                       +.+.+.++++|+||.|..               |...-..+.+.|.+.. ...+|+.+....|+.
T Consensus       109 -~~~~~~~~~~DvVI~a~D---------------~~~~r~~l~~~~~~~~-~~p~I~~~~~~~~~~  157 (212)
T PRK08644        109 -DNIEELFKDCDIVVEAFD---------------NAETKAMLVETVLEHP-GKKLVAASGMAGYGD  157 (212)
T ss_pred             -HHHHHHHcCCCEEEECCC---------------CHHHHHHHHHHHHHhC-CCCEEEeehhhccCC
Confidence             345566777888887732               2223345566676652 246777665555554

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.16  E-value=0.0092  Score=44.77  Aligned_cols=99  Identities=19%  Similarity=0.203  Sum_probs=59.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCC--------------------------CCCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL--------------------------PSEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~Dl~   54 (209)
                      +|+|.|+ |++|.++++.|+..|. ++++++...-....+                          .+.-.++.+...++
T Consensus        23 ~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~  101 (197)
T cd01492          23 RILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDIS  101 (197)
T ss_pred             cEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCcc
Confidence            6899985 5599999999999995 677777543211111                          11123344444443


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      +  ...+.+++.|+||.+..               |...-..+-+.|++..  ..+|+.++..-+|
T Consensus       102 ~--~~~~~~~~~dvVi~~~~---------------~~~~~~~ln~~c~~~~--ip~i~~~~~G~~G  148 (197)
T cd01492         102 E--KPEEFFSQFDVVVATEL---------------SRAELVKINELCRKLG--VKFYATGVHGLFG  148 (197)
T ss_pred             c--cHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEecCCEE
Confidence            2  23455678888886632               1233445667777763  3577777665555

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.16  E-value=0.00078  Score=53.82  Aligned_cols=67  Identities=22%  Similarity=0.313  Sum_probs=48.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ++++|+|. |.+|+.+++.|.+.|.+|++.+|+..+...... .+++++     ..+++.+.+.++|+||++..
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-----~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-----HLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence            37999995 889999999999999999999998654322211 133332     23456677889999999853

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.15  E-value=0.0043  Score=50.81  Aligned_cols=34  Identities=29%  Similarity=0.479  Sum_probs=28.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRT   34 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~   34 (209)
                      |+|.|+||||++|+.+++.|.+.. .+++++.++.
T Consensus         4 ~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          4 LKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             cEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            389999999999999999998776 4888875543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.15  E-value=0.00043  Score=54.55  Aligned_cols=66  Identities=20%  Similarity=0.291  Sum_probs=45.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC----CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+.    ......  ++.+     ....++|+||++.+.
T Consensus       119 ~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInatp~  188 (270)
T TIGR00507       119 RVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINATSA  188 (270)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECCCC
Confidence            6899997 8999999999999999999999986554332211    111111  1111     123578999999875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.13  E-value=0.0092  Score=48.98  Aligned_cols=96  Identities=21%  Similarity=0.232  Sum_probs=60.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC--------------------------CCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------------------------SEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------------------------~~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+++++.|+..|. ++++++.+.-....+.                          ..-.++.+...++
T Consensus        30 ~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~  108 (355)
T PRK05597         30 KVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT  108 (355)
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC
Confidence            689998 59999999999999994 7777776532111111                          1123444445554


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                       .+...++++++|+||.+..               |...-..+.++|.+..  ..+|+.++.
T Consensus       109 -~~~~~~~~~~~DvVvd~~d---------------~~~~r~~~n~~c~~~~--ip~v~~~~~  152 (355)
T PRK05597        109 -WSNALDELRDADVILDGSD---------------NFDTRHLASWAAARLG--IPHVWASIL  152 (355)
T ss_pred             -HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEEe
Confidence             3455667888999998853               2233344666777763  346665543

>PRK07574 formate dehydrogenase; Provisional

Probab=97.13  E-value=0.0022  Score=53.02  Aligned_cols=65  Identities=17%  Similarity=0.080  Sum_probs=46.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |++.|.| .|-||+.++++|..-|++|...+|........ ...+       +.-..++.++++++|+|+.+..
T Consensus       193 ktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~~~g-------~~~~~~l~ell~~aDvV~l~lP  257 (385)
T PRK07574        193 MTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-QELG-------LTYHVSFDSLVSVCDVVTIHCP  257 (385)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhH-hhcC-------ceecCCHHHHhhcCCEEEEcCC
Confidence            5788998 69999999999999999999998865321111 1112       2212346678899999887765

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.12  E-value=0.0012  Score=53.79  Aligned_cols=73  Identities=15%  Similarity=0.066  Sum_probs=48.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc----CcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~~a~~   75 (209)
                      +.+||.||+|++|++.++-....|...++..++.+..+.... .+... ..|..+++.++...+    ++|+|+.|.|-
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-lGAd~-vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-LGADE-VVDYKDENVVELIKKYTGKGVDVVLDCVGG  235 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-cCCcE-eecCCCHHHHHHHHhhcCCCccEEEECCCC
Confidence            369999999999999999888888444444555443322211 13222 236777655555544    59999999984

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.12  E-value=0.0018  Score=52.58  Aligned_cols=72  Identities=18%  Similarity=0.186  Sum_probs=47.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC---CH-HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT---DY-RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~---~~-~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.+|..+++.+...|.+|+++++++++.+.+.+..++..+ .|..   +. +.+.+.. .++|+++++.|
T Consensus       154 ~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~~g  230 (338)
T cd08295         154 TVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDNVG  230 (338)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence            689999999999999998889999999988876554333221133222 1222   21 2233322 36899999876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.11  E-value=0.00032  Score=55.63  Aligned_cols=73  Identities=19%  Similarity=0.135  Sum_probs=47.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|.| +|+.|++++..|.+.|. +|+++.|+.++.+.+.+..+.......+...+++...+.++|+|||+...
T Consensus       127 ~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       127 RGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             eEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            689998 59999999999999996 79999998766544432100000000122223344556789999999764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.11  E-value=0.00013  Score=57.90  Aligned_cols=67  Identities=21%  Similarity=0.267  Sum_probs=46.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC-----CceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|.| +|+.|++++..|.+.|. +|++++|+..+.+.+...     ....+..  .   +++.+.+.++|+|||+..
T Consensus       129 ~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        129 RVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAAALAAADGLVHATP  201 (284)
T ss_pred             EEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHhhhCCCCEEEECCc
Confidence            689999 58899999999999996 799999987655443221     1122211  1   223445678999999943

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=97.11  E-value=0.0085  Score=46.17  Aligned_cols=101  Identities=19%  Similarity=0.147  Sum_probs=60.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC--------------------------CCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|.++++.|+..|. ++++++.+.-+...+..                          .-+++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            588888 69999999999999994 67777765321111110                          023445555664


Q ss_pred             CHHHH-HHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           55 DYRSL-VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        55 ~~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      +.+.. ...+++.|+||.+..               |..+-..+-+.|....  ..+|..++..-+|
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D---------------n~~aR~~ln~~c~~~~--iplI~~g~~G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD---------------NIIARRYVNGMLIFLI--VPLIESGTEGFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEcccCCce
Confidence            43322 345677888886632               3444555667777663  3566666543333

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.10  E-value=0.015  Score=45.63  Aligned_cols=31  Identities=26%  Similarity=0.363  Sum_probs=27.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~   33 (209)
                      +|+|.| .|++|+++++.|++.| -++++++.+
T Consensus        32 ~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         32 HICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            688998 6999999999999999 688888765

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=97.09  E-value=0.0015  Score=55.53  Aligned_cols=113  Identities=14%  Similarity=0.161  Sum_probs=63.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCCceEEEEccCCC------------HHHHHHHhcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTD------------YRSLVDACFGC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~------------~~~~~~~~~~~   66 (209)
                      |+|.|.| .|++|..++-.|++.|  ++|++++.++.+.+.+... +..+..-++.+            -.++.++++++
T Consensus         2 m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g-~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          2 VKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSD-QLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcC-CCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            7999997 7999999999999884  8899999887765443321 11111111100            11123456778


Q ss_pred             CEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                      |++|-|-+..... +........++......++.+.+..+...+|.+.|.
T Consensus        80 dvi~I~V~TP~~~-~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~ST  128 (473)
T PLN02353         80 DIVFVSVNTPTKT-RGLGAGKAADLTYWESAARMIADVSKSDKIVVEKST  128 (473)
T ss_pred             CEEEEEeCCCCCC-CCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCC
Confidence            9999887743211 000001133444455555555554333455555443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.09  E-value=0.00046  Score=55.52  Aligned_cols=69  Identities=20%  Similarity=0.239  Sum_probs=49.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+|+|.|+ |.+|+.+++.|...| .+|++++|+.++...+....+..     ..+.+++.+.+.++|+||.+.+.
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-----~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-----AVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-----EEeHHHHHHHHhcCCEEEECCCC
Confidence            57999986 999999999998876 67888999876544333321222     22334566777889999998774

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.07  E-value=0.00066  Score=56.81  Aligned_cols=38  Identities=21%  Similarity=0.246  Sum_probs=33.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (209)
                      |+|.|+| .|++|..++..|++.|++|+++++++.+.+.
T Consensus         4 ~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~   41 (415)
T PRK11064          4 ETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDT   41 (415)
T ss_pred             cEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence            5799998 6999999999999999999999998776554

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.07  E-value=9.9e-05  Score=53.66  Aligned_cols=65  Identities=25%  Similarity=0.297  Sum_probs=43.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|-++| .|-+|+.++++|+++|++|++.+|++++.+++... +++.       .++..++++++|+|+-+-.
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-g~~~-------~~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA-GAEV-------ADSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT-TEEE-------ESSHHHHHHHBSEEEE-SS
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh-hhhh-------hhhhhhHhhcccceEeecc
Confidence            4899999 59999999999999999999999987655443322 2211       1123445566688776643

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.06  E-value=0.018  Score=44.81  Aligned_cols=71  Identities=15%  Similarity=0.169  Sum_probs=55.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~   75 (209)
                      |+|+|.|||+= |+.+++.|.+.|++|+.........   .....+....+-+.+.+.+.+.++  ++++||...-+
T Consensus         3 ~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHP   75 (248)
T PRK08057          3 PRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHP   75 (248)
T ss_pred             ceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCc
Confidence            48999999875 9999999999999888866554322   222367888888889999999886  68999998654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.01  E-value=0.0048  Score=51.06  Aligned_cols=96  Identities=20%  Similarity=0.213  Sum_probs=58.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCC--------------------------CCCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL--------------------------PSEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+++++.|+..|. ++++++++.-....+                          ...-.++.+...++
T Consensus       137 ~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~~  215 (376)
T PRK08762        137 RVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERVT  215 (376)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            688987 59999999999999996 788888752111000                          00012333333333


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                       .+.+..+++++|+||++...               ...-..+.++|.+..  ..+|+.+..
T Consensus       216 -~~~~~~~~~~~D~Vv~~~d~---------------~~~r~~ln~~~~~~~--ip~i~~~~~  259 (376)
T PRK08762        216 -SDNVEALLQDVDVVVDGADN---------------FPTRYLLNDACVKLG--KPLVYGAVF  259 (376)
T ss_pred             -hHHHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHcC--CCEEEEEec
Confidence             34566677889999988541               222334667777763  456666543

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.0038  Score=50.12  Aligned_cols=71  Identities=15%  Similarity=0.132  Sum_probs=48.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHH---Hh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD---AC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~--~~~d~vi~~a~   74 (209)
                      +++|+|+++.+|.++++.+...|.+|+++++++.+.+.+... +... ..|..+.+....   ..  .++|+++++++
T Consensus       169 ~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g  244 (342)
T cd08266         169 TVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKEL-GADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG  244 (342)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence            689999999999999999999999999998876543322111 1111 124444433322   22  25899999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.01  E-value=0.00017  Score=47.46  Aligned_cols=66  Identities=26%  Similarity=0.363  Sum_probs=44.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC---CeEEEE-EcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG---HSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ||.|+| +|-+|.++++.|++.|   ++|.+. .|++++..++....++.....|      ..++++.+|+||.+--
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCC------hHHhhccCCEEEEEEC
Confidence            577885 8999999999999999   999966 7877665443332232232212      2445668899998854

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.01  E-value=0.0039  Score=51.50  Aligned_cols=65  Identities=26%  Similarity=0.278  Sum_probs=51.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCCCCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |+|+|.|| |.+|+.+++.+.+.|++|++++.++... ....    -..+.+|..|.+.+.++++.+|+|.
T Consensus         3 ~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a----d~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          3 KTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA----DEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC----ceEEecCCCCHHHHHHHHhcCCEEE
Confidence            36999996 7999999999999999999998765432 1111    2356678999999999999999874

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.99  E-value=0.0039  Score=50.23  Aligned_cols=71  Identities=15%  Similarity=0.264  Sum_probs=46.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC---HHH-HHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD---YRS-LVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~---~~~-~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.+|..+++.+...|.+|+++++++++.+.+.. .++..+. |..+   ... +.... +++|+++.+.|
T Consensus       141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lGa~~vi-~~~~~~~~~~~~~~~~~~gvdvv~d~~G  216 (325)
T TIGR02825       141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LGFDVAF-NYKTVKSLEETLKKASPDGYDCYFDNVG  216 (325)
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEEE-eccccccHHHHHHHhCCCCeEEEEECCC
Confidence            68999999999999999888889999998887655433322 1332221 2222   222 22222 35899999876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.97  E-value=0.0026  Score=56.06  Aligned_cols=70  Identities=23%  Similarity=0.383  Sum_probs=57.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   73 (209)
                      +++|.| .|-+|+.+++.|.++|.++++++.++++.+...+ .+...+.+|.++++.++++ ++++|.+|-+-
T Consensus       402 ~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        402 RVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            578888 6999999999999999999999998876655443 3789999999999988764 35788888664

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.97  E-value=0.00075  Score=56.34  Aligned_cols=71  Identities=14%  Similarity=0.148  Sum_probs=51.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++++|.|+ |.+|+.+++.|.+.| .++++..|+.++...+....+    .+.....+++...+.++|+||++.+..
T Consensus       182 kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~~~~~~~~l~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        182 KNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NASAHYLSELPQLIKKADIIIAAVNVL  253 (414)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CCeEecHHHHHHHhccCCEEEECcCCC
Confidence            37999995 999999999999999 478888888665544433211    012233456677788999999998753

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.96  E-value=0.002  Score=52.66  Aligned_cols=108  Identities=21%  Similarity=0.212  Sum_probs=64.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CceE-EEEcc-----CCCHHHHHHHhcCcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALE-LVYGD-----VTDYRSLVDACFGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~-~~~~D-----l~~~~~~~~~~~~~d~   68 (209)
                      |||-|+| +|++|.-.+--|++.||+|++++.++.+.+.+...      ++++ +++-+     ++=-.+.+.+++..|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            8999999 89999999999999999999999877654433221      0110 00000     1101123456778899


Q ss_pred             EEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      ++-+-|..... +     -..++.....+++.+.+.....++|.+=|
T Consensus        80 ~fIavgTP~~~-d-----g~aDl~~V~ava~~i~~~~~~~~vvV~KS  120 (414)
T COG1004          80 VFIAVGTPPDE-D-----GSADLSYVEAVAKDIGEILDGKAVVVIKS  120 (414)
T ss_pred             EEEEcCCCCCC-C-----CCccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence            99888742111 1     12345556666666666543335554444

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.96  E-value=0.00093  Score=55.98  Aligned_cols=68  Identities=22%  Similarity=0.312  Sum_probs=49.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |.+|+.+++.|...| .+|++++|+..+...+....+...+     +.+++.+++.++|+||.+.+.
T Consensus       182 ~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       182 KALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             EEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEECCCC
Confidence            6899995 999999999999999 7899999986654333221122222     234566777899999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.95  E-value=0.0013  Score=49.21  Aligned_cols=68  Identities=22%  Similarity=0.155  Sum_probs=42.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |++..+||+|-||++++++|.+.|++|++-.|+.++... ..+..+..     + ...+..++.+.+|+|+-.-.
T Consensus         1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i-~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----I-TGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----c-ccCChHHHHhcCCEEEEecc
Confidence            666666779999999999999999999998766543221 11100111     1 11223456677788875543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.94  E-value=0.00088  Score=56.26  Aligned_cols=69  Identities=20%  Similarity=0.271  Sum_probs=49.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |.+|+.+++.|...|. +|++..|+..+...+....+.     +..+.+++.+.+.++|+||.+.+.
T Consensus       183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG-----EAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-----cEeeHHHHHHHhccCCEEEECCCC
Confidence            37899985 9999999999999996 788899986654333221121     223345566777899999998764

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.93  E-value=0.015  Score=45.24  Aligned_cols=73  Identities=27%  Similarity=0.309  Sum_probs=53.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-CCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~   75 (209)
                      |+|+|.|||+= |+.+++.|.++|+ |++..-.+-..... ..........+-+.+.+.+.+.++  +++.||...-+
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHP   76 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHP   76 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence            89999999876 8999999999998 55433222111111 111357788888889999999885  69999998654

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.93  E-value=0.011  Score=48.65  Aligned_cols=56  Identities=16%  Similarity=0.128  Sum_probs=42.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++|.|+|.+|.||+-+++.|.+. |++|+++++...                ...+.   ...+.++|+||-|...
T Consensus         5 ~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~----------------~~~~~---~~~v~~aDlVilavPv   61 (370)
T PRK08818          5 PVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADP----------------GSLDP---ATLLQRADVLIFSAPI   61 (370)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCcc----------------ccCCH---HHHhcCCCEEEEeCCH
Confidence            48999999999999999999865 889998887421                01122   3456789999988763

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.92  E-value=0.014  Score=48.13  Aligned_cols=95  Identities=19%  Similarity=0.273  Sum_probs=59.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC--------------------------CCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------------------------SEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------------------------~~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+.+++.|+..|. ++++++.+.-+...+.                          ..-+++.+...++
T Consensus        43 ~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~  121 (370)
T PRK05600         43 RVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERLT  121 (370)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeecC
Confidence            689998 59999999999999994 8888877532111111                          0023444444443


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                       .+.+.++++++|+||.|..               |...-..+.+.|.+..  ..+|+.+.
T Consensus       122 -~~~~~~~~~~~DlVid~~D---------------n~~~r~~in~~~~~~~--iP~v~~~~  164 (370)
T PRK05600        122 -AENAVELLNGVDLVLDGSD---------------SFATKFLVADAAEITG--TPLVWGTV  164 (370)
T ss_pred             -HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEE
Confidence             4456677888999998753               2334445666777763  24555544

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.92  E-value=0.0077  Score=48.91  Aligned_cols=61  Identities=18%  Similarity=0.179  Sum_probs=44.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |++.|.| .|.||+.+++.|...|++|++.+|+......     ..       .-..++.++++++|+|+.+..
T Consensus       147 ~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~-----~~-------~~~~~l~ell~~aDiVil~lP  207 (330)
T PRK12480        147 MTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD-----FL-------TYKDSVKEAIKDADIISLHVP  207 (330)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh-----hh-------hccCCHHHHHhcCCEEEEeCC
Confidence            5789998 6999999999999999999999987542111     00       111245677889998887654

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.92  E-value=0.015  Score=48.44  Aligned_cols=100  Identities=20%  Similarity=0.133  Sum_probs=60.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC--------------------------CCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|+.+++.|+..|. ++++++.+.-....+..                          .-+++.+...++
T Consensus        44 ~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~  122 (392)
T PRK07878         44 RVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD  122 (392)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC
Confidence            689998 69999999999999995 67777654321111110                          012333444444


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                       .+...++++++|+||.+..               |...-..+-++|.+..  ..+|+.+....+|
T Consensus       123 -~~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~--~p~v~~~~~g~~G  170 (392)
T PRK07878        123 -PSNAVELFSQYDLILDGTD---------------NFATRYLVNDAAVLAG--KPYVWGSIYRFEG  170 (392)
T ss_pred             -hhHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEeccCEE
Confidence             3345667778888887642               2333444667777763  3477766544444

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.91  E-value=0.0025  Score=51.74  Aligned_cols=72  Identities=22%  Similarity=0.241  Sum_probs=46.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCC---HHHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD---YRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.+|..+++.+...|. +|+++++++++.+.+....++..+ .|..+   .+.+.++. .++|+++++.+
T Consensus       157 ~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~g  233 (345)
T cd08293         157 TMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKTDNVAERLRELCPEGVDVYFDNVG  233 (345)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCCCHHHHHHHHCCCCceEEEECCC
Confidence            689999999999999998888898 799988876543322211133222 12222   22233332 36899999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.90  E-value=0.0005  Score=58.55  Aligned_cols=68  Identities=15%  Similarity=0.166  Sum_probs=45.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |++|++++..|.+.|++|++.+|+..+.+.+....+...  .++.+   +. .+.++|+||+|...
T Consensus       333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~--~~~~~---~~-~l~~~DiVInatP~  400 (477)
T PRK09310        333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA--FPLES---LP-ELHRIDIIINCLPP  400 (477)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce--echhH---hc-ccCCCCEEEEcCCC
Confidence            47899995 899999999999999999998887654433222101111  12221   11 24678999999763

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.90  E-value=0.0065  Score=51.46  Aligned_cols=70  Identities=19%  Similarity=0.295  Sum_probs=49.6

Q ss_pred             CEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc
Q 028444            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         1 m~ilItG~----------------~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      ++||||+|                ||-.|.+|++++..+|++|+++.-... +. .+  .+++.+.  +..-+++.+++.
T Consensus       257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-~p--~~v~~i~--V~ta~eM~~av~  330 (475)
T PRK13982        257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-DP--QGVKVIH--VESARQMLAAVE  330 (475)
T ss_pred             CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-CC--CCceEEE--ecCHHHHHHHHH
Confidence            46788876                789999999999999999999974322 11 11  2566654  445555555543


Q ss_pred             ---CcCEEEEcCccC
Q 028444           65 ---GCHVIFHTAALV   76 (209)
Q Consensus        65 ---~~d~vi~~a~~~   76 (209)
                         ..|++|++|+..
T Consensus       331 ~~~~~Di~I~aAAVa  345 (475)
T PRK13982        331 AALPADIAIFAAAVA  345 (475)
T ss_pred             hhCCCCEEEEecccc
Confidence               379999999974

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.88  E-value=0.0014  Score=52.42  Aligned_cols=35  Identities=43%  Similarity=0.676  Sum_probs=31.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      |+|.|.|+ |-+|..++..|.+.|++|++++|+.+.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~   35 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAH   35 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHH
Confidence            89999995 999999999999999999999996544

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.88  E-value=0.0057  Score=50.81  Aligned_cols=68  Identities=18%  Similarity=0.108  Sum_probs=51.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |+|+|+|+ |..|+.+++.+.+.|++|+.++.++........   -..+..|..|.+.+.++++  ++|+|+-.
T Consensus        13 ~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a---d~~~~~~~~d~~~l~~~~~~~~id~vi~~   82 (395)
T PRK09288         13 TRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA---HRSHVIDMLDGDALRAVIEREKPDYIVPE   82 (395)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh---hheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence            58999985 789999999999999999999876543211111   1246678889999888887  78988754

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.85  E-value=0.018  Score=47.31  Aligned_cols=67  Identities=13%  Similarity=0.134  Sum_probs=40.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh-CCCe---EEEEEcCCC--CCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLK-QGHS---VRALVRRTS--DISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~-~g~~---V~~~~r~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.||||++|+.+.+.+++ +.+.   +..+.....  +...+.   +-.....++.+.+.    +.++|+++-+++
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~---g~~~~v~~~~~~~~----~~~~Divf~a~~   74 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFG---GKEGTLQDAFDIDA----LKKLDIIITCQG   74 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccC---CCcceEEecCChhH----hcCCCEEEECCC
Confidence            4899999999999999995554 4565   666544211  111121   11223334444433    367999998876

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.84  E-value=0.025  Score=46.23  Aligned_cols=33  Identities=27%  Similarity=0.503  Sum_probs=28.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~   33 (209)
                      |+|.|+|++|++|+.+++.|.+++ .++..+.++
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            789999999999999999998876 688887443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.84  E-value=0.0023  Score=53.06  Aligned_cols=38  Identities=39%  Similarity=0.454  Sum_probs=31.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL   40 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~   40 (209)
                      |+|.|.| .|++|..++..|+ .|++|++++++..+.+.+
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l   38 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAML   38 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHH
Confidence            8999997 7999999997665 599999999987765443

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.82  E-value=0.0031  Score=58.05  Aligned_cols=155  Identities=17%  Similarity=0.170  Sum_probs=97.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCCCCC-------CCCC-CceEEEEccCCCHHHHHHHhcC------c
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG-------LPSE-GALELVYGDVTDYRSLVDACFG------C   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~~~~-------~~~~-~~~~~~~~Dl~~~~~~~~~~~~------~   66 (209)
                      ..+|+||-|+.|-.+++.|.++|.+ +++.+|+.-+..-       .... .++.+-.-|++..+....++..      +
T Consensus      1770 sYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~v 1849 (2376)
T KOG1202|consen 1770 SYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPV 1849 (2376)
T ss_pred             eEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccc
Confidence            5799999999999999999999964 5555665432110       1110 2344445566666666666643      4


Q ss_pred             CEEEEcCccCC------CCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           67 HVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        67 d~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      -.|+|+|...+      ...+++.+.-+.-+.+|.+|=+.-+..- ..+-||..||...-.++.+.              
T Consensus      1850 GGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ-------------- 1915 (2376)
T KOG1202|consen 1850 GGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ-------------- 1915 (2376)
T ss_pred             cchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc--------------
Confidence            57899998642      2334445555566777777766666542 12468888876543333333              


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCc
Q 028444          140 TQYERSKAVADKIALQAASEGLPIVPVYPGV  170 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~  170 (209)
                      +.|+.+..++|.++..-...|++-+.+.=|.
T Consensus      1916 tNYG~aNS~MERiceqRr~~GfPG~AiQWGA 1946 (2376)
T KOG1202|consen 1916 TNYGLANSAMERICEQRRHEGFPGTAIQWGA 1946 (2376)
T ss_pred             cccchhhHHHHHHHHHhhhcCCCcceeeeec
Confidence            3399888899988877555676655555443

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.82  E-value=0.019  Score=47.08  Aligned_cols=71  Identities=17%  Similarity=0.065  Sum_probs=47.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|.| +|.||..+++.+...|.+|++++.+.++........++..+. |..+.+.+.+...++|++|.+.|
T Consensus       186 ~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi-~~~~~~~~~~~~~~~D~vid~~g  256 (360)
T PLN02586        186 HLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL-VSTDPEKMKAAIGTMDYIIDTVS  256 (360)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEE-cCCCHHHHHhhcCCCCEEEECCC
Confidence            578866 599999999988888999988877655433222122443322 33344455555557899999877

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.82  E-value=0.0045  Score=50.33  Aligned_cols=64  Identities=19%  Similarity=0.169  Sum_probs=44.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|.||+.++++|...|++|++.+|+.....  ....++.        ..++.++++++|+|+.+...
T Consensus       151 ktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~~~--------~~~l~ell~~aDiV~l~lP~  214 (333)
T PRK13243        151 KTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEA--EKELGAE--------YRPLEELLRESDFVSLHVPL  214 (333)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcCCE--------ecCHHHHHhhCCEEEEeCCC
Confidence            3788999 599999999999999999999888643211  0000111        12456678899998887653

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.81  E-value=0.0036  Score=52.90  Aligned_cols=68  Identities=16%  Similarity=0.146  Sum_probs=46.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-CcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi~~a~~~   76 (209)
                      +++|||++| +|.++++.|++.|++|++.+++......    +.. .++.+..++.  ...   .+. ++|.||+.+|+.
T Consensus         7 ~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-~g~~~~~~~~--~~~---~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          7 KVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-EGIKVICGSH--PLE---LLDEDFDLMVKNPGIP   79 (447)
T ss_pred             EEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-cCCEEEeCCC--CHH---HhcCcCCEEEECCCCC
Confidence            689999977 9999999999999999999876532211    111 2445544332  111   233 489999999864

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.79  E-value=0.0054  Score=48.63  Aligned_cols=53  Identities=23%  Similarity=0.268  Sum_probs=42.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|.|.+|.+|+.++..|.++|.+|++..|...                      .+.+.++++|+||++.|.
T Consensus       160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~----------------------~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ----------------------NLPELVKQADIIVGAVGK  212 (283)
T ss_pred             CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch----------------------hHHHHhccCCEEEEccCC
Confidence            37999999999999999999999998888765211                      233455889999999873

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.79  E-value=0.001  Score=52.87  Aligned_cols=34  Identities=21%  Similarity=0.344  Sum_probs=30.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +|.|.| +|.+|+.++..|++.|++|++++++.+.
T Consensus         5 kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293          5 NVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            789998 5999999999999999999999987653

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.79  E-value=0.045  Score=41.99  Aligned_cols=99  Identities=18%  Similarity=0.176  Sum_probs=61.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------CceEEEEc-cCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------GALELVYG-DVTD   55 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~------------------------~~~~~~~~-Dl~~   55 (209)
                      +|+|.| -|++|+..+++|.+.|. ++++++...-....+..+                        +.++.... |.-.
T Consensus        32 ~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t  110 (263)
T COG1179          32 HVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFIT  110 (263)
T ss_pred             cEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhC
Confidence            578888 59999999999999994 677776543211111100                        23333322 3345


Q ss_pred             HHHHHHHhc-CcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           56 YRSLVDACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        56 ~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      ++.+.+++. +.|.||.+-               .|+..-..|++.|+++. +   -++||+++-+
T Consensus       111 ~en~~~~~~~~~DyvIDai---------------D~v~~Kv~Li~~c~~~k-i---~vIss~Gag~  157 (263)
T COG1179         111 EENLEDLLSKGFDYVIDAI---------------DSVRAKVALIAYCRRNK-I---PVISSMGAGG  157 (263)
T ss_pred             HhHHHHHhcCCCCEEEEch---------------hhhHHHHHHHHHHHHcC-C---CEEeeccccC
Confidence            666666554 578888663               35667788899999873 3   3456654433

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.79  E-value=0.00097  Score=53.80  Aligned_cols=35  Identities=37%  Similarity=0.543  Sum_probs=31.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      |+|.|.| .|.+|.+++..|++.|++|.+++|+++.
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~   36 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQ   36 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            5899999 5999999999999999999999997553

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.78  E-value=0.0058  Score=48.94  Aligned_cols=37  Identities=30%  Similarity=0.565  Sum_probs=32.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (209)
                      |+|.|+| .|-+|+.+++.|++.|++|++.+|++++.+
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~   37 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVE   37 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence            7899998 799999999999999999999999866543

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.78  E-value=0.004  Score=48.92  Aligned_cols=66  Identities=20%  Similarity=0.225  Sum_probs=44.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|-+|..+++.|.+.|   ++|.+.+|+.++.+.+....++..    ..+.   .+++.++|+||-+..
T Consensus         3 m~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~----~~~~---~~~~~~advVil~v~   71 (267)
T PRK11880          3 KKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA----ATDN---QEAAQEADVVVLAVK   71 (267)
T ss_pred             CEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee----cCCh---HHHHhcCCEEEEEcC
Confidence            5899999 5999999999999998   789999998654433322112211    1122   334567898887653

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.76  E-value=0.01  Score=47.72  Aligned_cols=71  Identities=18%  Similarity=0.247  Sum_probs=47.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.+|..+++.+...|.+|+++++++.+.+.+.+ .+++.+ .|..+.   +.+.++. .++|+++++.|
T Consensus       146 ~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         146 TVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            68999999999999999888899999998887654433322 133222 133322   2233322 35899998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.76  E-value=0.0067  Score=48.00  Aligned_cols=53  Identities=23%  Similarity=0.291  Sum_probs=44.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      .+++|+|.++.+|+.++..|.++|.+|+++.+..                      ..+.+.++++|+||.+.|.
T Consensus       159 k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        159 KNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCC
Confidence            3799999999999999999999999999886531                      1345677899999999885

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.73  E-value=0.0012  Score=52.63  Aligned_cols=65  Identities=23%  Similarity=0.312  Sum_probs=44.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.| .|.+|+.+++.|.+.|++|.+.+|+..+.+.+... ++..       .++..++++++|+||-+..
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~~~-------~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GAET-------ASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCee-------cCCHHHHHhcCCEEEEeCC
Confidence            5899998 69999999999999999999998876543322211 2211       1123345677888887754

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.73  E-value=0.0071  Score=50.59  Aligned_cols=63  Identities=13%  Similarity=0.096  Sum_probs=45.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|+| .|.||+.+++.|...|.+|+++++++.+...... .++..     .+   +.++++++|+||.+.|
T Consensus       214 ~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~v-----~~---l~eal~~aDVVI~aTG  276 (425)
T PRK05476        214 VVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFRV-----MT---MEEAAELGDIFVTATG  276 (425)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCEe-----cC---HHHHHhCCCEEEECCC
Confidence            689999 5999999999999999999999887655332211 13332     12   3455678999998765

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.72  E-value=0.002  Score=51.30  Aligned_cols=36  Identities=19%  Similarity=0.383  Sum_probs=31.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (209)
                      +|.|.|+ |.+|+.++..|++.|++|+++++++...+
T Consensus         3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~   38 (288)
T PRK09260          3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLE   38 (288)
T ss_pred             EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            6899995 99999999999999999999999866543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.71  E-value=0.0058  Score=48.58  Aligned_cols=71  Identities=21%  Similarity=0.209  Sum_probs=47.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d~vi~~a~   74 (209)
                      +++|+|++|.+|.++++.+...|.+|+.+++++.+.+.+.. .++..+ .|..+.+   .+.+..  +++|.++++++
T Consensus       147 ~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~  222 (325)
T cd08253         147 TVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-AGADAV-FNYRAEDLADRILAATAGQGVDVIIEVLA  222 (325)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECCc
Confidence            68999999999999999999999999999887654332211 122211 2333332   233333  36899999986

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.71  E-value=0.0065  Score=48.77  Aligned_cols=67  Identities=19%  Similarity=0.251  Sum_probs=44.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|..+++.|.+.|+  +|++++|+++..+..... ++...   ..  ....+.+.++|+||.+..
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~-g~~~~---~~--~~~~~~~~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAREL-GLGDR---VT--TSAAEAVKGADLVILCVP   75 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC-CCCce---ec--CCHHHHhcCCCEEEECCC
Confidence            4799998 89999999999999885  899999876543322111 11100   11  112345678999998876

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=96.71  E-value=0.0025  Score=50.97  Aligned_cols=31  Identities=45%  Similarity=0.718  Sum_probs=29.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR   32 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r   32 (209)
                      |+|.|.| +|.+|..++..|.+.|++|++++|
T Consensus         1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec
Confidence            8999998 699999999999999999999999

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.71  E-value=0.0029  Score=50.68  Aligned_cols=37  Identities=27%  Similarity=0.468  Sum_probs=32.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (209)
                      |+|.++| .|-+|+.+++.|++.|++|++.+|++++.+
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~   37 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVD   37 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            7899998 799999999999999999999998765543

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.70  E-value=0.0071  Score=47.84  Aligned_cols=67  Identities=27%  Similarity=0.348  Sum_probs=43.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|+|.| .|.||+-+++.|.++|+.|.+++++........+      ...++.|.   +.......++|+||-+..
T Consensus         4 ~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a------~~lgv~d~~~~~~~~~~~~~aD~VivavP   73 (279)
T COG0287           4 MKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAA------LELGVIDELTVAGLAEAAAEADLVIVAVP   73 (279)
T ss_pred             cEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHH------hhcCcccccccchhhhhcccCCEEEEecc
Confidence            3555555 9999999999999999999888776543211111      11244443   112445567899998765

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.70  E-value=0.0025  Score=54.62  Aligned_cols=36  Identities=25%  Similarity=0.346  Sum_probs=31.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      |+|.|+| +|.+|+.++..|++.|++|++.++++++.
T Consensus         5 ~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~   40 (495)
T PRK07531          5 MKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAE   40 (495)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence            5788997 79999999999999999999999986543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.70  E-value=0.0058  Score=49.93  Aligned_cols=72  Identities=18%  Similarity=0.241  Sum_probs=46.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC---CH-HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT---DY-RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~---~~-~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+|++|.+|...++.+...|.+|+++++++.+.+.+....++..+. |..   +. +.+.++. .++|+++.+.|
T Consensus       161 ~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi-~~~~~~~~~~~i~~~~~~gvD~v~d~vG  237 (348)
T PLN03154        161 SVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-NYKEEPDLDAALKRYFPEGIDIYFDNVG  237 (348)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEE-ECCCcccHHHHHHHHCCCCcEEEEECCC
Confidence            6899999999999999988888999998887665433221111332222 222   22 2233222 35899999877

>PRK07411 hypothetical protein; Validated

Probab=96.70  E-value=0.027  Score=46.81  Aligned_cols=100  Identities=21%  Similarity=0.178  Sum_probs=60.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC--------------------------CCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS--------------------------EGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--------------------------~~~~~~~~~Dl~   54 (209)
                      +|+|.| .|++|..+++.|+..|. ++++++.+.-....+..                          .-+++.+...++
T Consensus        40 ~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~  118 (390)
T PRK07411         40 SVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS  118 (390)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC
Confidence            689998 69999999999999994 67777654321111110                          023444444444


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~  120 (209)
                      . +...+++.++|+||.|..               |...-..+.++|.+..  ..+|+.+...-+|
T Consensus       119 ~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~--~p~v~~~~~g~~g  166 (390)
T PRK07411        119 S-ENALDILAPYDVVVDGTD---------------NFPTRYLVNDACVLLN--KPNVYGSIFRFEG  166 (390)
T ss_pred             H-HhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEEEccCEE
Confidence            3 345667788999998753               2233344556776663  3556555443333

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.70  E-value=0.014  Score=46.85  Aligned_cols=72  Identities=18%  Similarity=0.167  Sum_probs=45.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceE-EEEccCCCH-HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE-LVYGDVTDY-RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~~-~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|.|++|.+|.++++.+...|.+|+.+++++.+.+.+.. .++. ++..+-.+. +.+.+.. +++|.++++.+
T Consensus       142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g  216 (329)
T cd08250         142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVG  216 (329)
T ss_pred             EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCceEEeCCCccHHHHHHHhcCCCCeEEEECCc
Confidence            68999999999999999888999999998887654332211 1222 122221121 1222221 35899998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.69  E-value=0.0013  Score=56.74  Aligned_cols=68  Identities=18%  Similarity=0.134  Sum_probs=44.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+....+...+  ++   ++..+. ....|+|||+.+.
T Consensus       381 ~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~~--~~---~~~~~~~~~~~diiINtT~v  449 (529)
T PLN02520        381 LFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQAL--TL---ADLENFHPEEGMILANTTSV  449 (529)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCcee--eH---hHhhhhccccCeEEEecccC
Confidence            5899998 8999999999999999999999876554433221111111  11   222222 2356888888764

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.69  E-value=0.0029  Score=51.05  Aligned_cols=72  Identities=17%  Similarity=0.148  Sum_probs=46.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----------CCceE--EEEccCCCHHHHHHHhcCcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----------EGALE--LVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----------~~~~~--~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      +|.|.| +|-+|+.++..|+..|++|++.+++++..+....          ..+..  .....++-..++.++++++|.|
T Consensus         9 ~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV   87 (321)
T PRK07066          9 TFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI   87 (321)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence            688998 5999999999999999999999987653221100          00000  0000111122355678899999


Q ss_pred             EEcCc
Q 028444           70 FHTAA   74 (209)
Q Consensus        70 i~~a~   74 (209)
                      +-+..
T Consensus        88 iEavp   92 (321)
T PRK07066         88 QESAP   92 (321)
T ss_pred             EECCc
Confidence            98864

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.68  E-value=0.0093  Score=47.91  Aligned_cols=72  Identities=19%  Similarity=0.210  Sum_probs=46.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|.|++|.+|.++++.+.+.|.+|+.+++++.+.+.+.+..++..+ .|..+.   +.+.+.. .++|+++++.|
T Consensus       148 ~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~v~~~~~~~~d~vi~~~g  223 (329)
T cd05288         148 TVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAA-INYKTPDLAEALKEAAPDGIDVYFDNVG  223 (329)
T ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceE-EecCChhHHHHHHHhccCCceEEEEcch
Confidence            589999999999999999999999999988766443322110122111 122222   2222222 36899999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.68  E-value=0.0089  Score=47.96  Aligned_cols=71  Identities=20%  Similarity=0.102  Sum_probs=47.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC--HHHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|.|++|.+|.++++.+...|.+|+++++++++.+.+.. .++..+ .|..+  .+.+.... .++|+++++.+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g  222 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEV-IPREELQEESIKPLEKQRWAGAVDPVG  222 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEE-EcchhHHHHHHHhhccCCcCEEEECCc
Confidence            68999999999999999999999999999887765433322 133222 12222  22233322 35899998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK07877 hypothetical protein; Provisional

Probab=96.67  E-value=0.022  Score=50.88  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=62.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCC---CCCCCC----------------------CCCceEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTS---DISGLP----------------------SEGALELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~---~~~~~~----------------------~~~~~~~~~~Dl~   54 (209)
                      +|+|.|. | +|+.++..|+..|.  ++++++...-   .+++..                      ..-+++.+...++
T Consensus       109 ~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~  186 (722)
T PRK07877        109 RIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLT  186 (722)
T ss_pred             CEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            6999999 7 99999999999994  7888876432   222210                      0024555665565


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                       .+.+.++++++|+||.|.-               |+..-..|.++|.+.+  ..+|+.++
T Consensus       187 -~~n~~~~l~~~DlVvD~~D---------------~~~~R~~ln~~a~~~~--iP~i~~~~  229 (722)
T PRK07877        187 -EDNVDAFLDGLDVVVEECD---------------SLDVKVLLREAARARR--IPVLMATS  229 (722)
T ss_pred             -HHHHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcC--CCEEEEcC
Confidence             6678888889999998853               2334445567777763  34666554

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.67  E-value=0.0011  Score=52.77  Aligned_cols=64  Identities=17%  Similarity=0.166  Sum_probs=43.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +|.|+| .|.+|+.+++.|++.|++|++.+|++++.+.+... +..       ...+..++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~-------~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GAV-------TAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCc-------ccCCHHHHHhcCCEEEEecC
Confidence            467887 79999999999999999999999987554332221 111       11123456677888777754

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PLN00203 glutamyl-tRNA reductase

Probab=96.66  E-value=0.0013  Score=56.36  Aligned_cols=70  Identities=21%  Similarity=0.419  Sum_probs=49.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.+|+.+++.|...|. +|+++.|+.++...+... ++....   ....++...++.++|+||.+.+.
T Consensus       268 kVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        268 RVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             EEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEccCC
Confidence            6999996 9999999999999996 799999987665444321 122211   22334456677899999987653

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.64  E-value=0.01  Score=48.07  Aligned_cols=64  Identities=17%  Similarity=0.186  Sum_probs=45.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++-|.| .|-||+++++++..-|++|++.++-..+ .... .         ...-.+++.+++.++|+|+.....
T Consensus       143 kTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~-~---------~~~~~~~Ld~lL~~sDiv~lh~Pl  207 (324)
T COG0111         143 KTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV-D---------GVVGVDSLDELLAEADILTLHLPL  207 (324)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhcc-c---------cceecccHHHHHhhCCEEEEcCCC
Confidence            3678888 7999999999999999999999883322 1111 0         122234567788999988776653

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.62  E-value=0.0086  Score=48.08  Aligned_cols=72  Identities=25%  Similarity=0.350  Sum_probs=47.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CceEEEE-----ccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVY-----GDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~-----~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|.|.| +|-.|.+|+..|.++|++|.+..|+++-.+++... .+..++.     ..+.-..++.++++++|+|+-.-
T Consensus         2 ~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av   79 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV   79 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence            6899999 58889999999999999999999976533222111 1222222     12222344677778888877554

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.61  E-value=0.0019  Score=51.56  Aligned_cols=37  Identities=27%  Similarity=0.482  Sum_probs=32.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (209)
                      +|.|+| .|.+|..+++.|++.|++|++.+|++++.+.
T Consensus         3 ~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~   39 (296)
T PRK15461          3 AIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDA   39 (296)
T ss_pred             eEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            788998 7999999999999999999999998765433

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.61  E-value=0.013  Score=47.06  Aligned_cols=60  Identities=17%  Similarity=0.202  Sum_probs=43.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++.|.| .|-||+++++.|..-|++|++.+|+..+.       ++...      ..++.+++.++|+|+.+...
T Consensus       124 tvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~~-------~~~~~------~~~l~ell~~aDiv~~~lp~  183 (303)
T PRK06436        124 SLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVND-------GISSI------YMEPEDIMKKSDFVLISLPL  183 (303)
T ss_pred             EEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCccc-------Ccccc------cCCHHHHHhhCCEEEECCCC
Confidence            688888 79999999998888899999998864321       11100      12456778899999887663

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.61  E-value=0.011  Score=48.07  Aligned_cols=70  Identities=14%  Similarity=0.108  Sum_probs=44.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCH--HHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDY--RSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|+|+ |.+|...++.+...|. +|+++++++.+.+...+ .+...+ .|..+.  +++.+...++|++|.+.|
T Consensus       172 ~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lGa~~v-i~~~~~~~~~~~~~~g~~D~vid~~G  244 (343)
T PRK09880        172 RVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MGADKL-VNPQNDDLDHYKAEKGYFDVSFEVSG  244 (343)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cCCcEE-ecCCcccHHHHhccCCCCCEEEECCC
Confidence            6899985 9999999998888897 68888887665543322 233332 233332  222221124899999988

>PLN02688 pyrroline-5-carboxylate reductase

Probab=96.61  E-value=0.0014  Score=51.36  Aligned_cols=64  Identities=11%  Similarity=0.180  Sum_probs=44.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC----eEEEE-EcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH----SVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |||.++| .|-+|.++++.|++.|+    +|++. .|++.+.+.+.. .++...    .+.   .++++++|+||-+.
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~-~g~~~~----~~~---~e~~~~aDvVil~v   69 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS-LGVKTA----ASN---TEVVKSSDVIILAV   69 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH-cCCEEe----CCh---HHHHhcCCEEEEEE
Confidence            8999998 89999999999999998    88887 776654433322 133221    122   34456789998775

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.61  E-value=0.011  Score=47.60  Aligned_cols=61  Identities=21%  Similarity=0.150  Sum_probs=43.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|.||+++++++..-|.+|.+.+|.....    . ..+.        ..++.++++.+|+|+.+...
T Consensus       146 ktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~-~~~~--------~~~l~ell~~sDvv~lh~Pl  206 (311)
T PRK08410        146 KKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK----N-EEYE--------RVSLEELLKTSDIISIHAPL  206 (311)
T ss_pred             CEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc----c-cCce--------eecHHHHhhcCCEEEEeCCC
Confidence            3688888 79999999999998899999988753211    0 1111        22567788999988766553

>PRK06444 prephenate dehydrogenase; Provisional

Probab=96.60  E-value=0.0034  Score=47.04  Aligned_cols=29  Identities=34%  Similarity=0.523  Sum_probs=27.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRA   29 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~   29 (209)
                      |++.|+||+|.+|+.+++.|.+.|+.|.+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~~   29 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVYI   29 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEEE
Confidence            89999999999999999999999999863

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.60  E-value=0.0082  Score=47.82  Aligned_cols=53  Identities=19%  Similarity=0.288  Sum_probs=43.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++|.|+|.+|.+|+.++..|+++|++|++..|...                      ++.++.+++|+||-+.|.
T Consensus       160 k~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~----------------------~l~e~~~~ADIVIsavg~  212 (301)
T PRK14194        160 KHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST----------------------DAKALCRQADIVVAAVGR  212 (301)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEecCC
Confidence            36899999999999999999999999999865422                      234566788999988874

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.60  E-value=0.019  Score=39.38  Aligned_cols=70  Identities=21%  Similarity=0.307  Sum_probs=41.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEE-EcCCCCCCCCCCC-CceE-EEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDISGLPSE-GALE-LVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~-~r~~~~~~~~~~~-~~~~-~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ++.|+|++|.+|+.+++.|.+. ++++..+ +|+..+.+..... ++.. .+..++. .+.+.  ..++|+|+-+.+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~DvV~~~~~   74 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE-PEDFE--ELAVDIVFLALP   74 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc-cCChh--hcCCCEEEEcCC
Confidence            5789999999999999999884 7888887 4432222221111 1111 1111222 22222  257899998865

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.59  E-value=0.052  Score=44.29  Aligned_cols=66  Identities=20%  Similarity=0.322  Sum_probs=39.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh-CCCe---EEEEEcCC--CCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLK-QGHS---VRALVRRT--SDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~-~g~~---V~~~~r~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.||||++|+.+.+.|.+ ..+.   +..+....  .+.-.+.. ..+.+.  ++ +++.    +.++|+++-+++
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~-~~l~v~--~~-~~~~----~~~~Divf~a~~   77 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG-REIIIQ--EA-KINS----FEGVDIAFFSAG   77 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC-cceEEE--eC-CHHH----hcCCCEEEECCC
Confidence            5899999999999999999984 5666   55554322  11111111 112222  22 3332    367898888775

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.59  E-value=0.0015  Score=53.01  Aligned_cols=35  Identities=31%  Similarity=0.415  Sum_probs=31.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      |+|.|.| +|-+|.+++..|++.|++|+++.|+++.
T Consensus         5 m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~   39 (328)
T PRK14618          5 MRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEF   39 (328)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            7899998 6999999999999999999999997553

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.55  E-value=0.0089  Score=43.16  Aligned_cols=63  Identities=13%  Similarity=0.154  Sum_probs=40.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      +|+|.| +|-+|...++.|++.|++|++++.  +..+++.....+++..-.+...     -++++|.||-+
T Consensus        15 ~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp--~~~~~l~~l~~i~~~~~~~~~~-----dl~~a~lViaa   77 (157)
T PRK06719         15 VVVIIG-GGKIAYRKASGLKDTGAFVTVVSP--EICKEMKELPYITWKQKTFSND-----DIKDAHLIYAA   77 (157)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC--ccCHHHHhccCcEEEecccChh-----cCCCceEEEEC
Confidence            689999 499999999999999999999842  2222222222344444333322     24667777754

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.55  E-value=0.012  Score=48.11  Aligned_cols=69  Identities=23%  Similarity=0.205  Sum_probs=44.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC---CCCCCCCCCCCceEEEEccCCCHHHH-HHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR---TSDISGLPSEGALELVYGDVTDYRSL-VDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~~~~~~d~vi~~a~   74 (209)
                      +++|+|+ |.+|...++.+...|.+|++++|+   +.+.+.+. ..++..+  |..+.+.. .....++|+||.+.|
T Consensus       175 ~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g  247 (355)
T cd08230         175 RALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGATYV--NSSKTPVAEVKLVGEFDLIIEATG  247 (355)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEe--cCCccchhhhhhcCCCCEEEECcC
Confidence            5899985 999999998888889999999884   33322221 1244443  33221110 122346899999987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.55  E-value=0.001  Score=46.13  Aligned_cols=33  Identities=39%  Similarity=0.609  Sum_probs=28.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEE-cCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALV-RRT   34 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~-r~~   34 (209)
                      |+|-|+|+ |-+|.+|++.|.+.|++|..+. |+.
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            68999995 9999999999999999999875 443

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.54  E-value=0.011  Score=47.72  Aligned_cols=58  Identities=17%  Similarity=0.080  Sum_probs=43.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++.|.| .|-||++++++|..-|.+|++.+|.... .      ..        +..++.++++++|+|+.+...
T Consensus       150 tvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~-~------~~--------~~~~l~ell~~sDiv~l~lPl  207 (317)
T PRK06487        150 TLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRP-A------RP--------DRLPLDELLPQVDALTLHCPL  207 (317)
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCc-c------cc--------cccCHHHHHHhCCEEEECCCC
Confidence            688888 7999999999999889999988775221 0      11        122467788999988877653

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.54  E-value=0.006  Score=48.40  Aligned_cols=71  Identities=15%  Similarity=0.141  Sum_probs=55.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ++.|.|| |++|..-++-..--|.+|+++++|.+++..+....+-. +..=.+++..+++.+.+.|.||..-=
T Consensus       170 kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~r-v~~~~st~~~iee~v~~aDlvIgaVL  240 (371)
T COG0686         170 KVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGR-VHTLYSTPSNIEEAVKKADLVIGAVL  240 (371)
T ss_pred             cEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCce-eEEEEcCHHHHHHHhhhccEEEEEEE
Confidence            5788884 99999999999999999999999988877665442222 22235678889999999999986543

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.53  E-value=0.014  Score=48.30  Aligned_cols=68  Identities=19%  Similarity=0.110  Sum_probs=51.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a   73 (209)
                      ||+|.| +|..|+.+++++.+.|++|++++.++........   -..+..|..|.+.+.++++  ++|+|+...
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a---d~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA---HRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC---ceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            689999 5999999999999999999999887543211111   1345678889999988887  699888543

This enzyme is an alternative to PurN (TIGR00639)

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.52  E-value=0.016  Score=46.86  Aligned_cols=65  Identities=20%  Similarity=0.172  Sum_probs=44.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ++|.|+| .|-+|+++++.|.+.|++|++..|+..+........++..     .   +..++++++|+|+.+..
T Consensus        18 ktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~-----~---s~~eaa~~ADVVvLaVP   82 (330)
T PRK05479         18 KKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEV-----L---TVAEAAKWADVIMILLP   82 (330)
T ss_pred             CEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCee-----C---CHHHHHhcCCEEEEcCC
Confidence            4788998 6899999999999999999887775433221111113221     1   34567788999998764

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.48  E-value=0.028  Score=46.49  Aligned_cols=71  Identities=18%  Similarity=0.109  Sum_probs=46.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|.|+ |.+|...++.+...|.+|+++++++++..+.....++..+ .|..+.+.+.+...++|+|+.+.|
T Consensus       181 ~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~-i~~~~~~~v~~~~~~~D~vid~~G  251 (375)
T PLN02178        181 RLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSF-LVTTDSQKMKEAVGTMDFIIDTVS  251 (375)
T ss_pred             EEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEE-EcCcCHHHHHHhhCCCcEEEECCC
Confidence            5788775 9999999998889999999888765432111111234332 233344555555557899999987

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.47  E-value=0.012  Score=47.88  Aligned_cols=62  Identities=18%  Similarity=0.208  Sum_probs=42.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHH-hCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.| .|.||+++++.|. ..|++|++.+++....  ...  .       +.-..++.++++++|+|+.+..
T Consensus       147 ~~VgIIG-~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~--~~~--~-------~~~~~~l~ell~~aDvIvl~lP  209 (332)
T PRK08605        147 LKVAVIG-TGRIGLAVAKIFAKGYGSDVVAYDPFPNAK--AAT--Y-------VDYKDTIEEAVEGADIVTLHMP  209 (332)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCccHh--HHh--h-------ccccCCHHHHHHhCCEEEEeCC
Confidence            5799999 6999999999994 4678888877654321  110  1       1111245677889999987765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	209
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		6e-13
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		3e-11
4id9_A	347	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-10
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		1e-10
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		6e-08
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		5e-07
4f6l_B	508	Crystal Structure Of Aureusimine Biosynthetic Clust		2e-06
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		8e-06
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		1e-05
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		4e-05
4f6c_A	427	Crystal Structure Of Aureusimine Biosynthetic Clust		2e-04
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		4e-04
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		4e-04
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		7e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLP-SEGALELVYGDVTD 55
           + V+GASG++G  L   LL++G++VRA VR  +++        LP +E  L L   D+ D
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLAD 67
Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  ++    DP +      +EG+  ++++    KTV ++++TS
Sbjct: 68  EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127
Query: 115 SFFALGSTDGYI--------ADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVP 165
           S   +   +  +        +D      +K     Y  SK +A++ A + A E  +  + 
Sbjct: 128 SAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFIT 187
Query: 166 VYPGVIYGPGKLTT--GNLVAKLVRLLFSQ-HFSLV----FFHCQITCHA 208
           + P ++ GP  +++   +L+  L  +  ++ H+S++    F H    C+A
Sbjct: 188 IIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNA 237

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR----RTSDISGLPS-EGALELVY---GDV 53
           ++ V+G +G+LG  +  +LL+ G+SV   +R    R  D+S L +  GA E ++    D+
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62
Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAV-NVEGLKNVVQAAKETKTVEKIIY 112
           ++  S   A  GC  IFHTA+ ++  + +P        V+G   +++A   +KTV++ IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122
Query: 113 TSSFFAL--GSTDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASE-GLPI 163
           TSS  A+     D  + DE+       +   K F   Y  SK +A+K  L+   + G+ +
Sbjct: 123 TSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDV 182
Query: 164 VPVYPGVIYG 173
           V +    I G
Sbjct: 183 VTLILPFIVG 192

>pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G++G +G  +  AL  QG +VR    R S   G       E V G + D ++L DA
Sbjct: 22  ILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGG-------EEVVGSLEDGQALSDA 74
Query: 63  CFGCHVIFHTAALVEPWLP-DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
             G   + H  A +  W P D  R FAVNVEG + ++ AA     V + ++ SS
Sbjct: 75  IMGVSAVLHLGAFMS-WAPADRDRMFAVNVEGTRRLLDAAS-AAGVRRFVFASS 126

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTDYRS 58
           V G +G++   L   LL++G++V   VR      + S +  L   G L++   D+TD  S
Sbjct: 14  VVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELS 73
Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
                 GC  +FH A  V     DP        ++G+ NV++A    K+V+++I TSS  
Sbjct: 74  FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAA 133
Query: 118 ALGSTD----GYIADENQVHEEKYFCTQ------YERSKAVADKIALQAASE-GLPIVPV 166
           A+        G + DE    + ++  +       Y  SK +A+K A + A E  + ++ V
Sbjct: 134 AVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITV 193
Query: 167 YPGVIYG 173
            P ++ G
Sbjct: 194 IPTLMAG 200

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSV---RALVRR--TSDISGLPSEGALELVYGDVTDY 56
           K+L++G  G+LG  L    L QG  +     L R+  T ++  L S G  E V+GD+ + 
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62
Query: 57  RSLV--------DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
             +         D+CF  H+    A      + +P   F +NV G  N+++A ++  +  
Sbjct: 63  NDVTRLITKYMPDSCF--HLAGQVAMTTS--IDNPCMDFEINVGGTLNLLEAVRQYNSNC 118
Query: 109 KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ----------------YERSKAVADKI 152
            IIY+S+    G  + Y  +E    E +Y C                  Y  SK  AD+ 
Sbjct: 119 NIIYSSTNKVYGDLEQYKYNET---ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQY 175
Query: 153 ALQAAS-EGLPIVPVYPGVIYGPGKLTT 179
            L  A   GL  V      +YG  +  T
Sbjct: 176 MLDYARIFGLNTVVFRHSSMYGGRQFAT 203

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRAL-------VRRTSDISGLPSE---GALELVYGDV 53
           L++G +G++G  L   LLK    V  L        R   ++  L SE      + + GD+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 54  TDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            +     +AC G   + H AAL  V   + DP    A N++G  N++ AA++ K V+   
Sbjct: 91  RNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFT 149
Query: 112 YTSSFFALGSTDGYIADENQVHE--EKYFCTQY 142
           Y +S    G   G    E+ + +    Y  T+Y
Sbjct: 150 YAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKY 182

>pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 32/225 (14%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRR----------TSDISGLPSEGALELVYGDV 53
           L++GA+G+LG  L  AL    H +   +R            ++++   SE  +E++  ++
Sbjct: 154 LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNI 213
Query: 54  T----DYRSLVDACF--GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                D+  + D         I H  A  + +  D   F  VNV+G  +V++ A++    
Sbjct: 214 EVIVGDFECMDDVVLPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQHHA- 271
Query: 108 EKIIYTS-----SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
            ++IY S     ++F + + D   + E  V++ +   + Y RSK  ++   L+A + GL 
Sbjct: 272 -RLIYVSTISVGTYFDIDTEDVTFS-EADVYKGQLLTSPYTRSKFYSELKVLEAVNNGL- 328
Query: 163 IVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFH-CQITC 206
                 G I   G LT+       +R + +  FS+V     Q+ C
Sbjct: 329 -----DGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDC 368

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           M+IL++G +G LG  L    L QGH +  +    T     LP    L ++ G VTD   L
Sbjct: 21  MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLL 80
Query: 60  ---VDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKE 103
               D+    HV+   AA  +P  W  D     A NV+G  NV +AA +
Sbjct: 81  ERAFDSFKPTHVVHSAAAYKDPDDWAED----AATNVQGSINVAKAASK 125

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE--------LVYGDV 53
           +IL+ GA+GY+G  +  A L  GH    LVR ++  S       LE        +V+G +
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65
Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
            D+ SLV+A     V+  T               ++ +E   N+++A KE  TV++
Sbjct: 66  DDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVGTVKR 108

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I+V+G +G++G  L   L++ G+ V  +     DI    + G+ EL   D+ DY    
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVV-----DIVQRDTGGSAELHVRDLKDYSW-- 53
Query: 61  DACFGCHVIFHTAALVEPWLP--DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
            A     V+FH AA  E  L   +P   F  NV    NV++ A++T  V  +++ SS   
Sbjct: 54  GAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTV 112
Query: 119 LGSTD 123
            G  D
Sbjct: 113 YGDAD 117

>pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 427

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRR----------TSDISGLPSEGALELVYGDV 53
           L++GA+G+LG  L  AL    H +   +R            ++++   SE  +E    ++
Sbjct: 73  LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLXTNLNDYFSEETVEXXLSNI 132
Query: 54  T----DYRSLVDACF--GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                D+    D         I H  A  +    D   F  VNV+G  +V++ A++    
Sbjct: 133 EVIVGDFECXDDVVLPENXDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQHHA- 190
Query: 108 EKIIYTS-----SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
            ++IY S     ++F + + D   + E  V++ +   + Y RSK  ++   L+A + GL 
Sbjct: 191 -RLIYVSTISVGTYFDIDTEDVTFS-EADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLD 248
Query: 163 IVPVYPGVIYGP 174
              V  G +  P
Sbjct: 249 GRIVRVGNLTSP 260

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L    L + +  + ++   SDI    + G ++ +  DV++ R  +D 
Sbjct: 2   ILVTGSSGQIGTELV-PYLAEKYGKKNVI--ASDIVQRDT-GGIKFITLDVSN-RDEIDR 56
Query: 63  C---FGCHVIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
               +    IFH A ++      DP+  + VN+ G  N+++AAK+ + VEK++  S+   
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGV 115
Query: 119 LG 120
            G
Sbjct: 116 FG 117

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L    L + +  + ++   SDI    + G ++ +  DV++ R  +D 
Sbjct: 2   ILVTGSSGQIGTELV-PYLAEKYGKKNVI--ASDIVQRDT-GGIKFITLDVSN-RDEIDR 56
Query: 63  C---FGCHVIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
               +    IFH A ++      DP+  + VN+ G  N+++AAK+ + VEK++  S+   
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGV 115
Query: 119 LG 120
            G
Sbjct: 116 FG 117

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I+V+G +G++G  L   L++ G+ V  +   +S      +  A EL   D+ DY    
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSA-ELHVRDLKDYSW-- 57
Query: 61  DACFGCHVIFHTAALVEPWLP--DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
            A     V+FH AA  E  L   +P   F  NV    NV++ A++T  V  +++ SS   
Sbjct: 58  GAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTV 116
Query: 119 LGSTD 123
            G  D
Sbjct: 117 YGDAD 121

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	209
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-71
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	8e-41
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	3e-33
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-32
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	4e-32
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-31
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	9e-31
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-30
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	3e-27
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-26
1xq6_A	253	Unknown protein; structural genomics, protein stru	7e-26
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-25
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	4e-25
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-23
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-22
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	5e-22
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	5e-22
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	6e-22
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	9e-22
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-21
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-21
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	4e-21
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	1e-20
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-19
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	2e-19
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-19
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	4e-19
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	7e-19
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	7e-19
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-18
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	2e-18
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-18
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	3e-18
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-18
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	6e-18
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	6e-18
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	8e-18
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-17
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	1e-17
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	3e-17
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	4e-17
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-16
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-16
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	4e-16
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	5e-16
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-15
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	7e-15
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	1e-14
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	1e-13
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-13
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-13
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	6e-13
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-12
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	8e-12
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	9e-12
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-11
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-10
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	3e-10
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	4e-10
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	6e-10
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	6e-10
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-09
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	2e-09
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	8e-09
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	9e-09
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	1e-08
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	1e-08
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	2e-08
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	6e-08
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	6e-08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-07
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	7e-07
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	2e-06
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-05
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	3e-05
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	5e-05
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-05
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	1e-04
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-04
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-04
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-04
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	6e-04

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  220 bits (562), Expect = 1e-71
 Identities = 44/192 (22%), Positives = 73/192 (38%), Gaps = 6/192 (3%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +K  V GA+G LG     A+   GH +  + R +S I  L      E    ++ D+  L 
Sbjct: 14  VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLE-PECRVAEMLDHAGLE 72

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +  +A              A  +        A  + + V +I+Y  S +A+ 
Sbjct: 73  RALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMP 131

Query: 121 -STDGYIADENQVHEE-KYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG--K 176
               G    E   ++      + Y   K   D+ A + A  GLP+V   PG++ G     
Sbjct: 132 RHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIG 191

Query: 177 LTTGNLVAKLVR 188
            TTG ++  +  
Sbjct: 192 PTTGRVITAIGN 203

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  137 bits (347), Expect = 8e-41
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 14/200 (7%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI++ GASG++G  L +  L +G  V A+VR    I        L++   DV+    + 
Sbjct: 5   KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH--LKVKKADVSSLDEVC 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           + C G   +            +    +   ++    ++   K+   V + +      +L 
Sbjct: 63  EVCKGADAVISAFNPG----WNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLF 117

Query: 121 STDG-YIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLT 178
              G  + D  +V E           KA+ +        E  +  V   P     PG  T
Sbjct: 118 IAPGLRLMDSGEVPENILP-----GVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT 172

Query: 179 TGNLVAKLVRLLFSQHFSLV 198
               + K   ++     S +
Sbjct: 173 GRYRLGKDDMIVDIVGNSHI 192

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  120 bits (303), Expect = 3e-33
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 18/191 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPS-EGA---LELVYGDV 53
           ++ V+G +G+LG  +  +LL+ G+SV   +R   +    +S L +  GA   L     D+
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAV-NVEGLKNVVQAAKETKTVEKIIY 112
           ++  S   A  GC  IFHTA+ ++  + +P        V+G   +++A   +KTV++ IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122

Query: 113 TSSFFAL--GSTDGYIADE------NQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPI 163
           TSS  A+     D  + DE      + +   K F   Y  SK +A+K  L+     G+ +
Sbjct: 123 TSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDV 182

Query: 164 VPVYPGVIYGP 174
           V +    I G 
Sbjct: 183 VTLILPFIVGR 193

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  119 bits (300), Expect = 1e-32
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTD 55
              V G +G++   L   LL++G++V   VR   +         L   G L++   D+TD
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTD 70

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFF---AVNVEGLKNVVQAAKETKTVEKIIY 112
             S      GC  +FH A  V     DP       A+   G+ NV++A    K+V+++I 
Sbjct: 71  ELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQ--GVVNVMKACTRAKSVKRVIL 128

Query: 113 TSSFFALGST----DGYIADE------NQVHEEKYFCTQYERSKAVADKIALQ-AASEGL 161
           TSS  A+        G + DE        +   K     Y  SK +A+K A + A    +
Sbjct: 129 TSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNI 188

Query: 162 PIVPVYPGVIYGP 174
            ++ V P ++ G 
Sbjct: 189 DLITVIPTLMAGS 201

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  117 bits (296), Expect = 4e-32
 Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 21/192 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLP-SEGALELVYGDVT 54
            + V+GASG++G  L   LL++G++VRA VR  +++        LP +E  L L   D+ 
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLA 66

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFF---AVNVEGLKNVVQAAKETKTVEKII 111
           D  S  +A  GC  +FH A  ++    DP        +   G+  ++++    KTV +++
Sbjct: 67  DEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIE--GMLGIMKSCAAAKTVRRLV 124

Query: 112 YTSSFFAL--GSTDGYIADE------NQVHEEKYFCTQYERSKAVADKIALQAASE-GLP 162
           +TSS   +        + DE           +K     Y  SK +A++ A + A E  + 
Sbjct: 125 FTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNID 184

Query: 163 IVPVYPGVIYGP 174
            + + P ++ GP
Sbjct: 185 FITIIPTLVVGP 196

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  113 bits (285), Expect = 2e-31
 Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 19/173 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M++LV GA+G +   L   L  +GH   A+VR       L   GA ++V  ++ +     
Sbjct: 22  MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEE--DFS 79

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A      +   A           +   +++ G    +Q A++   +++ I  SS   + 
Sbjct: 80  HAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVD 136

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
              G +   +           Y  +K +AD   L+ +   L    V PG +  
Sbjct: 137 PDQGPMNMRH-----------YLVAKRLADD-ELKRS--SLDYTIVRPGPLSN 175

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  111 bits (279), Expect = 9e-31
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 23/184 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSL 59
           MKI + G++G +G  L  +L    + + A  R+   +        ++ V+ DV      +
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYN---NVKAVHFDVDWTPEEM 57

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
                G   I + +               V++ G   ++QAA++ + V++ I  S+ F+L
Sbjct: 58  AKQLHGMDAIINVSG------SGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSL 110

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY---GPGK 176
                  A  + + +       Y  +K  AD   L   +  L    + PG +      G 
Sbjct: 111 QPEKWIGAGFDALKD-------YYIAKHFADL-YLTKET-NLDYTIIQPGALTEEEATGL 161

Query: 177 LTTG 180
           +   
Sbjct: 162 IDIN 165

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  108 bits (273), Expect = 6e-30
 Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 7/137 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI + GA+G  G       ++ G+ V  LVR +S +       A  +V GDV     + 
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +           P       V  EG +N+V A K    V+K++  +S F L 
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPT-----TVMSEGARNIVAAMKAHG-VDKVVACTSAFLLW 116

Query: 121 STDGYIADENQVHEEKY 137
                      V ++  
Sbjct: 117 DPTKVPPRLQAVTDDHI 133

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  105 bits (263), Expect = 3e-27
 Identities = 40/200 (20%), Positives = 72/200 (36%), Gaps = 28/200 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVY-GDVT 54
            +LV+GA+G++   +   LL+ G+ VR   R  S ++           G  E     D+ 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              +  +   G   + H A++V  +           + G  N ++AA  T +V++ + TS
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVV-SFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 115 SFFAL----GSTDGYIADE-------------NQVHEEKYFCTQYERSKAVADKIALQAA 157
           S  +      + +G   DE                 + +     Y  SK  A+  A +  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191

Query: 158 SE---GLPIVPVYPGVIYGP 174
            E      +  V P    G 
Sbjct: 192 DENKPHFTLNAVLPNYTIGT 211

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  101 bits (254), Expect = 1e-26
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 14/176 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+GA+G +G  +   L    H VR             +E   E+V  D+ D +++ D
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLG----AAEAHEEIVACDLADAQAVHD 59

Query: 62  ACFGCHVIFHTAAL-VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               C  I H   + VE    D       N+ G  N+ +AA+      +I++ SS   +G
Sbjct: 60  LVKDCDGIIHLGGVSVERPWNDI---LQANIIGAYNLYEAARNLG-KPRIVFASSNHTIG 115

Query: 121 STDGYI-ADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVIYGP 174
                   D             Y  SK   + +A        +  + +  G  +  
Sbjct: 116 YYPRTTRIDTEVPRRPDSL---YGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK 168

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 99.5 bits (248), Expect = 7e-26
 Identities = 45/207 (21%), Positives = 67/207 (32%), Gaps = 32/207 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             +LV+GASG  G  +   L +       + LVR       +  E   ++  GD+TD  S
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE--ADVFIGDITDADS 62

Query: 59  LVDACFGCHVIFHTAALV---------------EPWLPDPSRFFAVNVEGLKNVVQAAKE 103
           +  A  G   +    + V               E    D      V+  G KN + AAK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
              V+ I+   S   +G               K         K  A++  L  +  G P 
Sbjct: 123 AG-VKHIVVVGS---MG------GTNPDHPLNKLGNGNILVWKRKAEQ-YLADS--GTPY 169

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLVRLL 190
             +  G +          LV K   LL
Sbjct: 170 TIIRAGGLLDKEGGVRELLVGKDDELL 196

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 98.6 bits (246), Expect = 2e-25
 Identities = 38/176 (21%), Positives = 61/176 (34%), Gaps = 14/176 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+GA+G LG  +   L      +R       D    P+    E V  D+ D  ++  
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD----PAGPNEECVQCDLADANAVNA 60

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS 121
              GC  I H             +    N+ GL N+ +AA+      +I++ SS      
Sbjct: 61  MVAGCDGIVHLGG--ISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASS----NH 113

Query: 122 TDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYPGVIYGP 174
           T GY     ++  +        Y  SK   + +A       G     V  G     
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPE 169

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 97.0 bits (241), Expect = 4e-25
 Identities = 35/200 (17%), Positives = 73/200 (36%), Gaps = 17/200 (8%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI + GA+G  G R+      +GH V A+VR    I+       + ++  D+ D    +
Sbjct: 1   MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFD--LTL 56

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 +V+     +              +V  L +++     T    +++      +L 
Sbjct: 57  SDLSDQNVVVDAYGI-------SPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQ 108

Query: 121 STD--GYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
             +    + +   + E  Y+ T   ++K +     L++         + P  ++ PG+ T
Sbjct: 109 IDEDGNTLLESKGLREAPYYPTARAQAKQLE---HLKSHQAEFSWTYISPSAMFEPGERT 165

Query: 179 TGNLVAKLVRLLFSQHFSLV 198
               + K   L  S   S +
Sbjct: 166 GDYQIGKDHLLFGSDGNSFI 185

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 92.2 bits (229), Expect = 3e-23
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 23/174 (13%)

Query: 1   MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
             +L+ GA G +   + + L  KQ        R+ + I       + +++ GDV ++ +L
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLNHAAL 82

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
             A  G  +++                         +V+ A K    V+++I+  S    
Sbjct: 83  KQAMQGQDIVYANLT------------GEDLDIQANSVIAAMKACD-VKRLIFVLSLGIY 129

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
               G   + N     +       +    A    ++A+  GL    + P  +  
Sbjct: 130 DEVPGKFVEWNNAVIGEPL-----KPFRRAADA-IEAS--GLEYTILRPAWLTD 175

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 91.2 bits (227), Expect = 3e-22
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 21/187 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L   L ++      +    SDI    + G ++ +  DV++   +  A
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA---SDIVQRDTGG-IKFITLDVSNRDEIDRA 57

Query: 63  C--FGCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
              +    IFH A ++    E    DP+  + VN+ G  N+++AAK+ + VEK++  S+ 
Sbjct: 58  VEKYSIDAIFHLAGILSAKGE---KDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTI 113

Query: 117 FALGSTDGYI-ADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPV-YPGVIYG 173
              G            +   +   T +  +K  A+ +      + GL +  + YPG+   
Sbjct: 114 GVFGPETPKNKVPSITITRPR---TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGI-IS 169

Query: 174 PGKLTTG 180
                T 
Sbjct: 170 YKAEPTA 176

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 90.3 bits (225), Expect = 5e-22
 Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 12/175 (6%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +KI V+G +G+LG  +  ++   G++   L        G  +    E    D T    L+
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPIILT----RSIGNKAINDYEYRVSDYTL-EDLI 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           +       + H AA            F  N    +N+  A  E   +  I+Y S+  A  
Sbjct: 58  NQLNDVDAVVHLAATRG--SQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYS 114

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
                  +E ++         Y  SK   + I    + + GL I  +    +YG 
Sbjct: 115 DETSLPWNEKELPLPDLM---YGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGF 166

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 88.9 bits (220), Expect = 5e-22
 Identities = 23/178 (12%), Positives = 49/178 (27%), Gaps = 10/178 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI V GA+G  G  +     ++GH V A+VR     +                      
Sbjct: 1   MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATV---ATLVKEPLVLTE 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                   +    +     +P  S    ++++   ++V   + +     +    S     
Sbjct: 58  ADLDSVDAVVDALS-----VPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAM 111

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
               +    +                   +   LQ  +  +  + + P   +  G  T
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA-NVNWIGISPSEAFPSGPAT 168

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 90.8 bits (226), Expect = 6e-22
 Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 18/187 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD--ISG----LPSEGALELVYGDV 53
             ++V G +G++G  L   LL+ G + V  +     D  +S     +P   A+      +
Sbjct: 33  TNVMVVGGAGFVGSNLVKRLLELGVNQVHVV-----DNLLSAEKINVPDHPAVRFSETSI 87

Query: 54  TDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           TD   L         +FH A     +  + DP      N      + +  K  K ++K++
Sbjct: 88  TDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVV 147

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFC---TQYERSKAVADKIALQ-AASEGLPIVPVY 167
           Y+++  ++       A   +  +        + Y  SK   +  ++       LP V   
Sbjct: 148 YSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRAR 207

Query: 168 PGVIYGP 174
              +YGP
Sbjct: 208 FQNVYGP 214

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 89.4 bits (222), Expect = 9e-22
 Identities = 40/197 (20%), Positives = 67/197 (34%), Gaps = 19/197 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KIL++G  G LG  L   L  QGH V  L R    +      G  + +  DVT   +L 
Sbjct: 4   SKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPM----PAGV-QTLIADVTRPDTLA 57

Query: 61  DAC-FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
                   ++ +  A           +    VEGL+N + A +    ++ + + SS    
Sbjct: 58  SIVHLRPEILVYCVA---ASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVY 113

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
           G       DE+          +    K + +    +A         +    IYGPG+L  
Sbjct: 114 GQEVEEWLDEDTPPI-----AKDFSGKRMLE---AEALLAAYSSTILRFSGIYGPGRLRM 165

Query: 180 GNLVAKLVRLLFSQHFS 196
                   +      ++
Sbjct: 166 IRQAQTPEQWPARNAWT 182

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 88.8 bits (220), Expect = 2e-21
 Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 37/181 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---------DISGLPSEGALELVYGD 52
           +IL+ GA+GY+G  +  A L  GH    LVR ++          +    + GA  +V+G 
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGS 64

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + D+ SLV+A     V+  T               ++ +E   N+++A KE  TV K  +
Sbjct: 65  IDDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVGTV-KRFF 110

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
            S F         +     V E K           V   I     +EG+P   V      
Sbjct: 111 PSEFGNDVDNVHAVEPAKSVFEVK---------AKVRRAI----EAEGIPYTYVSSNCFA 157

Query: 173 G 173
           G
Sbjct: 158 G 158

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 89.4 bits (221), Expect = 2e-21
 Identities = 36/194 (18%), Positives = 60/194 (30%), Gaps = 13/194 (6%)

Query: 4   LVSGASGYLGGRLCHALLKQGHS-----VRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
           L+ G +G +G  L   L           V  + RRT        +  +  V  D++D   
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRP--AWHEDNPINYVQCDISDPDD 62

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFF 117
                     + H   +              N +  +NV+ A       ++ I   +   
Sbjct: 63  SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 118 A---LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ--AASEGLPIVPVYPGVIY 172
                  + G I   +  + E     +Y       + I L+     EGL      PG I+
Sbjct: 123 HYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIF 182

Query: 173 GPGKLTTGNLVAKL 186
           G    +  NLV  L
Sbjct: 183 GFSPYSMMNLVGTL 196

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 88.2 bits (219), Expect = 4e-21
 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 29/196 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-------HSVRAL-VRRTSDISGLPSEGALELVYGD 52
           M I + GA+G +G +L   L+K G            + V +    +G    GA++    D
Sbjct: 15  MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFS--GAVDARAAD 72

Query: 53  VTDYRSLVDACF--GCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKE--- 103
           ++      +        VIFH AA+V    E    D  + + +N++G + +  A +    
Sbjct: 73  LSA-PGEAEKLVEARPDVIFHLAAIVSGEAE---LDFDKGYRINLDGTRYLFDAIRIANG 128

Query: 104 -TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GL 161
                 ++++TSS    G+   Y   +          T Y   KA+ + +    +     
Sbjct: 129 KDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL---TSYGTQKAICELLLSDYSRRGFF 185

Query: 162 PIVPV-YPGVIYGPGK 176
             + +  P +   PGK
Sbjct: 186 DGIGIRLPTICIRPGK 201

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 87.3 bits (217), Expect = 1e-20
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----------VRRTSDISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L          +     +         + + G
Sbjct: 29  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 88

Query: 52  DVTDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ +     +AC G   + H AAL  V   + DP    A N++G  N++ AA++ K V+ 
Sbjct: 89  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQS 147

Query: 110 IIYTSS 115
             Y +S
Sbjct: 148 FTYAAS 153

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----------VRRTSDISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L          +     +           + G
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG 86

Query: 52  DVTDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ D  +      G   + H AAL  V   + DP    A N+ G  N++ AAK  + V+ 
Sbjct: 87  DIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQS 145

Query: 110 IIYTSS 115
             Y +S
Sbjct: 146 FTYAAS 151

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 83.4 bits (207), Expect = 2e-19
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 14/121 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
           M+I+V+G +G++G  L   L++ G+ V  +     D   SG       + EL   D+ DY
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVV-----DNLSSGRREFVNPSAELHVRDLKDY 55

Query: 57  RSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                A     V+FH AA   V     +P   F  NV    NV++ A++T  V  +++ S
Sbjct: 56  SWG--AGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFAS 112

Query: 115 S 115
           S
Sbjct: 113 S 113

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 83.1 bits (206), Expect = 3e-19
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 17/124 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSEGALELVYGDVT 54
            K+ ++G  G +G  +   LL++G  V  +     D         L     L  V G + 
Sbjct: 22  KKVFITGICGQIGSHIAELLLERGDKVVGI-----DNFATGRREHLKDHPNLTFVEGSIA 76

Query: 55  DYRSLVDACFGCH--VIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           D+  +           + HTAA  + P   D       N  G  NVVQAAK+   V + +
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYKDPD--DWYNDTLTNCVGGSNVVQAAKKNN-VGRFV 133

Query: 112 YTSS 115
           Y  +
Sbjct: 134 YFQT 137

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 83.8 bits (207), Expect = 4e-19
 Identities = 45/217 (20%), Positives = 74/217 (34%), Gaps = 47/217 (21%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHS---VRALVRRTSDISG-------LPSEGA------- 45
           +L++GA+G+LG  L   LL++      +  LVR  SD            S          
Sbjct: 76  VLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK 135

Query: 46  ------LELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVN 90
                 LE+V GD +          +R L +      +I  +AA+V    P     F  N
Sbjct: 136 ELAADRLEVVAGDKSEPDLGLDQPMWRRLAET---VDLIVDSAAMVN-AFP-YHELFGPN 190

Query: 91  VEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE--------EKYFCTQY 142
           V G   +++ A  TK      Y S+     + +     E+            +  +   Y
Sbjct: 191 VAGTAELIRIALTTKLK-PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGY 249

Query: 143 ERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLT 178
             SK   + +  +A     LP+     G+I       
Sbjct: 250 GTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYA 286

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 81.9 bits (202), Expect = 7e-19
 Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 31/180 (17%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--------DISGLPSEGALELVYGDV 53
           ++L+ G +GY+G R+ +A +  GH    L R            +      GA +L+   +
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASL 64

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            D++ LVDA     V+    A             + ++     +V+A KE   +++ + +
Sbjct: 65  DDHQRLVDALKQVDVVISALA---------GGVLSHHILEQLKLVEAIKEAGNIKRFLPS 115

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                      +  D + +       +     K    K+     +  +P   V   +  G
Sbjct: 116 E----------FGMDPDIMEHALQPGSITFIDKR---KVRRAIEAASIPYTYVSSNMFAG 162

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 81.8 bits (203), Expect = 7e-19
 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
             I+V+G +G++G  +   L +  + +  +     D   SG       A  LV  D+   
Sbjct: 2   SLIVVTGGAGFIGSHVVDKLSE-SNEIVVI-----DNLSSGNEEFVNEAARLVKADLAA- 54

Query: 57  RSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             + D   G   ++H AA   V     +P   +  NV     +++A ++   V +I++TS
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTS 113

Query: 115 S 115
           +
Sbjct: 114 T 114

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 80.8 bits (200), Expect = 1e-18
 Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 11/136 (8%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           M I+++GA+G+LG  + +  +          VR    +          +   D  +  S+
Sbjct: 1   MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKV-SVRQLDYFNQESM 59

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           V+A  G   +      +   +    +     +  ++N+V AAK++  V  II+   +   
Sbjct: 60  VEAFKGMDTVV----FIPSIIHPSFK----RIPEVENLVYAAKQSG-VAHIIFIGYYADQ 110

Query: 120 GSTDGYIADENQVHEE 135
            +   +++        
Sbjct: 111 HNNPFHMSPYFGYASR 126

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 81.4 bits (201), Expect = 2e-18
 Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 30/192 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGLPSEGALELVYGDVTDYRSL 59
            K+L+ G +G++G  L   +L+        +  +T  +  L     +    GD+T  +  
Sbjct: 25  KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEW 84

Query: 60  VDACFG-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           V+     C VI    A+  P  ++  P R F ++ E    +V++A +      +++    
Sbjct: 85  VEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK--HLVFP--- 139

Query: 117 FALGSTD---GYIADENQVHE--EKYF---------CTQYERSKAVADKIALQAASEGLP 162
               ST    G  ADE Q                     Y  SK + D++      EGL 
Sbjct: 140 ----STSEVYGMCADE-QFDPDASALTYGPINKPRWI--YACSKQLMDRVIWGYGMEGLN 192

Query: 163 IVPVYPGVIYGP 174
                P    GP
Sbjct: 193 FTLFRPFNWIGP 204

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 80.3 bits (198), Expect = 3e-18
 Identities = 31/176 (17%), Positives = 61/176 (34%), Gaps = 32/176 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPSEGALELVYGDVTDYR 57
           KIL+ G +GY+G  +    LK GH      R  S     +    S GA  +V G++ ++ 
Sbjct: 13  KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGA-IIVKGELDEHE 71

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
            LV+      V+    A                +     +++A K    +++ + +    
Sbjct: 72  KLVELMKKVDVVISALA-------------FPQILDQFKILEAIKVAGNIKRFLPSD--- 115

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                  +  +E++++    F    ER + +   I        +P   V       
Sbjct: 116 -------FGVEEDRINALPPFEALIERKRMIRRAI----EEANIPYTYVSANCFAS 160

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 80.6 bits (199), Expect = 3e-18
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 13/115 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLV 60
           I V GA+G  G  L       GH VRA V     +    L +   + L  G + +   L+
Sbjct: 8   IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLM 67

Query: 61  DACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           D  F G H+ F    +                   K++  AAK   T++  IY+S
Sbjct: 68  DTLFEGAHLAF----INTTSQAGDEIAIG------KDLADAAKRAGTIQHYIYSS 112

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 79.9 bits (197), Expect = 3e-18
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 36/181 (19%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL---------ELVYGD 52
           KIL+ G +G +G  +  A +K G+   ALVR+T   +   ++  L          L+ GD
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + D+ +LV A     ++   A               + +E    +++A KE   V K  +
Sbjct: 64  INDHETLVKAIKQVDIVICAAG-------------RLLIEDQVKIIKAIKEAGNV-KKFF 109

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
            S F         +    QV EEK          ++   I     +EG+P   +      
Sbjct: 110 PSEFGLDVDRHDAVEPVRQVFEEK---------ASIRRVI----EAEGVPYTYLCCHAFT 156

Query: 173 G 173
           G
Sbjct: 157 G 157

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 78.9 bits (195), Expect = 6e-18
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 12/130 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             I V+GA+G LGG +   LLK+     + A+VR     S L  +G  E+ +GD     S
Sbjct: 1   FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGV-EVRHGDYNQPES 59

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           L  A  G   +      +     D +      +    NVV+AA++   V+ I YT   FA
Sbjct: 60  LQKAFAGVSKLL----FISGPHYDNTL----LIVQHANVVKAARDAG-VKHIAYTGYAFA 110

Query: 119 LGSTDGYIAD 128
             S       
Sbjct: 111 EESIIPLAHV 120

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 79.1 bits (196), Expect = 6e-18
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            +IL++G +G++GG L  AL+  G  V  L         +P EG  + +   V +     
Sbjct: 8   HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVP-PMIPPEGTGKFLEKPVLEL--EE 64

Query: 61  DACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                  +++H A+   V      P   +  NV+  ++++        V K++  S+
Sbjct: 65  RDLSDVRLVYHLASHKSVPRSFKQP-LDYLDNVDSGRHLLALCTSVG-VPKVVVGST 119

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 77.4 bits (190), Expect = 8e-18
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 25/187 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGA--LELVYGDVTDYRS 58
            I + GA+G +   L   LL      +    R+              + ++ G   +   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGX 66

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           L  A     V+F  A                +   + ++V+A      + ++I  S    
Sbjct: 67  LEQAVTNAEVVFVGA--------------MESGSDMASIVKALSRXN-IRRVIGVSMAGL 111

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
            G     +               Y + +  A  +        L    +    +Y   + T
Sbjct: 112 SGEFPVALEKWT----FDNLPISYVQGERQARNV---LRESNLNYTILRLTWLYNDPEXT 164

Query: 179 TGNLVAK 185
              L+ +
Sbjct: 165 DYELIPE 171

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 79.2 bits (195), Expect = 1e-17
 Identities = 29/176 (16%), Positives = 48/176 (27%), Gaps = 40/176 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M I+++GA G++G  L   L                                 T    L 
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHI-------------------FEVHRQTKEEELE 41

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A      I H A +          F   NV  L +V+           I+ +SS     
Sbjct: 42  SALLKADFIVHLAGV--NRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS----- 94

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPG 175
                      +   +     Y  SK   +++  + A E G  +       ++G  
Sbjct: 95  -----------IQATQD--NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKW 137

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 78.8 bits (195), Expect = 1e-17
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 17/124 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISGLPSEGALELVYGDVTDYR 57
           M+IL++G +G LG  L    L QGH +         T     LP    L ++ G VTD  
Sbjct: 21  MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA--TGKREVLPPVAGLSVIEGSVTD-A 77

Query: 58  SLVDACFGCH---VIFHTAAL---VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            L++  F       + H+AA     +    D +   A NV+G  NV +AA +   V++++
Sbjct: 78  GLLERAFDSFKPTHVVHSAAAYKDPD----DWAEDAATNVQGSINVAKAASKAG-VKRLL 132

Query: 112 YTSS 115
              +
Sbjct: 133 NFQT 136

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 77.7 bits (191), Expect = 3e-17
 Identities = 24/181 (13%), Positives = 58/181 (32%), Gaps = 37/181 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---------GLPSEGALELVYGD 52
           KI++ G +GY+G  +  A L   H      R  +  S            S G   ++ G+
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGV-TIIEGE 64

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + ++  +V       ++                     +    +++ A K    +++ + 
Sbjct: 65  MEEHEKMVSVLKQVDIVISALP-------------FPMISSQIHIINAIKAAGNIKRFLP 111

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
           +           +  +E+++     F +  E+ + +   I     +  LP   V      
Sbjct: 112 SD----------FGCEEDRIKPLPPFESVLEKKRIIRRAI----EAAALPYTYVSANCFG 157

Query: 173 G 173
            
Sbjct: 158 A 158

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 76.7 bits (189), Expect = 4e-17
 Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 11/128 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSL 59
           ++V G +G  GG +   LL+ G   VR + R     +   L  +GA E+V GD  D   +
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-EVVQGDQDDQVIM 66

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
             A  G +  F    +   W           V+  K +   A+    +  ++Y+      
Sbjct: 67  ELALNGAYATF---IVTNYWESCSQ---EQEVKQGKLLADLARRL-GLHYVVYSGLENIK 119

Query: 120 GSTDGYIA 127
             T G +A
Sbjct: 120 KLTAGRLA 127

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
           M++LV+G +G++G  +   LL +G  V  L     D   +G        +     D+ D 
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLARGLEVAVL-----DNLATGKRENVPKGVPFFRVDLRDK 55

Query: 57  RSLVDACFGCH--VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
             +  A        + H AA       VE    DP   F VN+ G  N+++A ++   VE
Sbjct: 56  EGVERAFREFRPTHVSHQAAQASVKVSVE----DPVLDFEVNLLGGLNLLEACRQYG-VE 110

Query: 109 KIIYTSSFFA 118
           K+++ S+  A
Sbjct: 111 KLVFASTGGA 120

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 75.1 bits (184), Expect = 3e-16
 Identities = 26/179 (14%), Positives = 59/179 (32%), Gaps = 33/179 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLPSEGALELVYGDVT 54
           ++L++GA+G++G  +  A L        L R              L  +GA  +VYG + 
Sbjct: 12  RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA-IIVYGLIN 70

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +  ++        +    + +              ++     +V+A K   T+++ + + 
Sbjct: 71  EQEAMEKILKEHEIDIVVSTVGGE-----------SILDQIALVKAMKAVGTIKRFLPSE 119

Query: 115 SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                     +  D N+    +     Y   + V   +       G+P   +    I  
Sbjct: 120 ----------FGHDVNRADPVEPGLNMYREKRRVRQLV----EESGIPFTYICCNSIAS 164

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 74.7 bits (184), Expect = 4e-16
 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           M++L+ G +G++G  L   LL++ H  V  L   +  IS   +      V GD++ +   
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

Query: 60  VDACFG-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           ++     C V+    A+  P  +  +P R F ++ E    +++   + +   +II+ S
Sbjct: 61  IEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK--RIIFPS 116

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 74.3 bits (183), Expect = 5e-16
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 7/119 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSL 59
           +KI ++GA G++   +   L  +GH V A   ++   ++        E    D+    + 
Sbjct: 30  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED--MFCDEFHLVDLRVMENC 87

Query: 60  VDACFGCHVIFHTAALVEP---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           +    G   +F+ AA +        + S     N     N+++AA+    +++  Y SS
Sbjct: 88  LKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASS 145

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 14/128 (10%)

Query: 3   ILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           I ++GA+G LG  +  +L+K      + A+VR  +    L ++G   +   D  D  +L 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGI-TVRQADYGDEAALT 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +     L+       S          +NV+ AAK    V+ I YTS   A  
Sbjct: 61  SALQGVEKLL----LI------SSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT 109

Query: 121 STDGYIAD 128
           S  G   +
Sbjct: 110 SPLGLADE 117

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 69.8 bits (171), Expect = 7e-15
 Identities = 30/178 (16%), Positives = 51/178 (28%), Gaps = 23/178 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             + + GASG  G  L   +L+QG    V  + RR        +   +     D      
Sbjct: 19  KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-EEAYKNVNQEVVDFEKLDD 77

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
              A  G  V F               F  V+ + +    + AK     +     SS  A
Sbjct: 78  YASAFQGHDVGFCCLG-TTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGA 135

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK 176
             S++                  Y + K   +    +   +   +    PGV+    +
Sbjct: 136 DKSSNFL----------------YLQVKGEVEAKVEELKFDRYSV--FRPGVLLCDRQ 175

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 70.0 bits (172), Expect = 1e-14
 Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 20/190 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSE--GALELVYGDVTDYR 57
            KIL+ GA G +G  L   L K  G     ++   SDI  L ++   +      +  D+ 
Sbjct: 3   PKILIIGACGQIGTELTQKLRKLYGTEN--VI--ASDIRKLNTDVVNSGPFEVVNALDFN 58

Query: 58  SLVDACFGCH---VIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            + +     H    I+  AAL+      +P+  + +N+  L +V+  AK  K ++KI + 
Sbjct: 59  QI-EHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWP 116

Query: 114 SSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPV-YPGV 170
           SS    G +T      +  + E     T Y  SK   ++      +  G+ +  + YPG+
Sbjct: 117 SSIAVFGPTTPKENTPQYTIMEPS---TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGL 173

Query: 171 IYGPGKLTTG 180
                    G
Sbjct: 174 -ISWSTPPGG 182

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 45/216 (20%), Positives = 68/216 (31%), Gaps = 44/216 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR---ALVRRTSDISG-----LPSEGALE----- 47
            +++V G  GY G      L K+ + V     LVRR  D         P     +     
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71

Query: 48  ---------LVYGDVTDYRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRF---FAVN 90
                    L  GD+ D+   +   F       + H          + D SR       N
Sbjct: 72  KALTGKSIELYVGDICDF-EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNN 130

Query: 91  VEGLKNVVQAAKETKTVEKIIYTSSFFALG----STD-GYI-ADENQVHEEKYFCTQ--- 141
           V G  NV+ A KE      ++   +    G      + GYI    N   +   +  Q   
Sbjct: 131 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 190

Query: 142 -YERSKAVADKIALQAASE--GLPIVPVYPGVIYGP 174
            Y  SK       +    +  G+    +  GV+YG 
Sbjct: 191 FYHLSKVHDSHN-IAFTCKAWGIRATDLNQGVVYGV 225

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 19/131 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG--HSVRAL-------------VRRTSDISGLPSEGA 45
             IL++G +G++G  L     +      V  L                      L     
Sbjct: 11  QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG 70

Query: 46  LELVYGDVTDYRSLVD-ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET 104
            E++  D+ +   L          +FH AA+ +  + +       N +   N+++ A+  
Sbjct: 71  -EVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK 129

Query: 105 KTVEKIIYTSS 115
           K   K+IY SS
Sbjct: 130 KA--KVIYASS 138

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 36/190 (18%), Positives = 63/190 (33%), Gaps = 30/190 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRAL-----VRRTSDISGLPSEGALELVYGDVT 54
             I+V+G +G++G  +  AL  +G   +  +       +  ++  L    A  +   D  
Sbjct: 47  RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFL 104

Query: 55  DYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
                 +       IFH  A      W          N +  K ++    E +     +Y
Sbjct: 105 IQIMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLEREI--PFLY 160

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFC--TQYERSKAVADKIALQAASE-GLPIVPVYPG 169
            SS     +T G     + +   +Y      +  SK + D+   Q   E    IV    G
Sbjct: 161 ASS----AATYG-GRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIV----G 211

Query: 170 V----IYGPG 175
                +YGP 
Sbjct: 212 FRYFNVYGPR 221

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 65.3 bits (159), Expect = 6e-13
 Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 24/207 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTS----DISGLPSEGALELVYGDVTD 55
           ++ V+G +G+ GG L   L   G +V+  +L   T     + + +     ++   GD+ D
Sbjct: 11  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIRD 68

Query: 56  YRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
              L+++   F   ++FH AA  LV     +P   ++ NV G   +++A +    V+ ++
Sbjct: 69  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 128

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD----------KIALQAASEGL 161
             +S     + +       + +E       Y  SK  A+                   G 
Sbjct: 129 NITSDKCYDNKEWIW--GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGT 186

Query: 162 PIVPVYPGVIYGPGKLTTGNLVAKLVR 188
            +  V  G + G G      +V  ++R
Sbjct: 187 AVATVRAGNVIGGGDWALDRIVPDILR 213

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 63.0 bits (154), Expect = 4e-12
 Identities = 37/188 (19%), Positives = 63/188 (33%), Gaps = 30/188 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRAL-----VRRTSDISGLPSEGALELVYGDVTDY 56
           I+V+G +G++G  +  AL  +G   +  +       +  ++  L    A  +   D    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFLIQ 59

Query: 57  RSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
               +       IFH  A      W          N +  K ++    E +     +Y S
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLEREI--PFLYAS 115

Query: 115 SFFALGSTDGYIADENQVHEEKYF--CTQYERSKAVADKIALQAASE-GLPIVPVYPGV- 170
           S     +T G     + +   +Y      Y  SK + D+   Q   E    IV    G  
Sbjct: 116 S----AATYG-GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIV----GFR 166

Query: 171 ---IYGPG 175
              +YGP 
Sbjct: 167 YFNVYGPR 174

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 62.3 bits (152), Expect = 8e-12
 Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 33/183 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGH--SVRALVR---RTSDISGLPSEGALELVYGDVTDY 56
            IL++G +G  G      +L   +   +    R   + S+++   ++  +    GDV D 
Sbjct: 23  TILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL 82

Query: 57  RSLVDACFGCHVIFHTAAL--VEPWLP----DPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
             L  A  G  +  H AAL  V    P    +P      N+ G  NV+ A  +   + ++
Sbjct: 83  ERLNYALEGVDICIHAAALKHV----PIAEYNPLECIKTNIMGASNVINACLKNA-ISQV 137

Query: 111 IYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV 170
           I  S       TD      N           Y  +K  +DK+ + A +        +  V
Sbjct: 138 IALS-------TDKAANPINL----------YGATKLCSDKLFVSANNFKGSSQTQFSVV 180

Query: 171 IYG 173
            YG
Sbjct: 181 RYG 183

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 62.0 bits (151), Expect = 9e-12
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDY 56
            +IL++G +G++G  L   L+  GH V  +      R  ++         EL+  DV + 
Sbjct: 28  KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 87

Query: 57  RSL-VDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
             + VD       I+H A+   P  ++ +P +    N  G  N++  AK      +++  
Sbjct: 88  LYIEVDQ------IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLA 139

Query: 114 SS 115
           S+
Sbjct: 140 ST 141

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 60.3 bits (146), Expect = 3e-11
 Identities = 39/175 (22%), Positives = 53/175 (30%), Gaps = 22/175 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             +L  G  GY    L  AL  QG  +    R    +  + + GA E +     +  SL 
Sbjct: 6   GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGA-EPLLWPGEE-PSLD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 H++  TA       PD      +   G     Q A        + Y S+    G
Sbjct: 63  GV---THLLISTA-------PDSGGDPVLAALGD----QIAARAAQFRWVGYLSTTAVYG 108

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
             DG   DE              R +          A   LP+       IYGPG
Sbjct: 109 DHDGAWVDETTPLTP-----TAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPG 158

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 42/185 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSEGALELVYGDVTDYRS 58
            ++L++GA+G  G  L   +L +    +  A  R+        +      +   V     
Sbjct: 6   KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK--------ALAEHPRLDNPVGPLAE 57

Query: 59  L-------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           L       +D  F C       A           F AV+ +    V + A E       +
Sbjct: 58  LLPQLDGSIDTAFCCLGTTIKEA------GSEEAFRAVDFDLPLAVGKRALEMG-ARHYL 110

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
             S   ALG      AD             Y R K   ++   +     L I    P ++
Sbjct: 111 VVS---ALG------ADAKSS-------IFYNRVKGELEQALQEQGWPQLTI--ARPSLL 152

Query: 172 YGPGK 176
           +GP +
Sbjct: 153 FGPRE 157

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 57.5 bits (140), Expect = 3e-10
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
           M++LV+G SGY+G   C  LL+ GH V          R+++     + G         V 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH----PTFVE 56

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
           GD+ +  +L+      H    VI H A L      V+     P  ++  NV G   ++ A
Sbjct: 57  GDIRN-EALMTEILHDHAIDTVI-HFAGLKAVGESVQ----KPLEYYDNNVNGTLRLISA 110

Query: 101 AKETKTVEKIIYTSS 115
            +    V+  I++SS
Sbjct: 111 MRAAN-VKNFIFSSS 124

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 57.8 bits (140), Expect = 4e-10
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---DISGLPSEGALEL 48
           + + ++G+ G +G  L   L   GH V  LVR+          P   A +L
Sbjct: 148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDL 198

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            ++LV+GA+G LG  +     +          R             ++   ++ D  ++ 
Sbjct: 3   RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFR------RARPKFEQV---NLLDSNAVH 53

Query: 61  DAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
                F  HVI H AA     +VE     P     +NV+   N+ + A        +IY 
Sbjct: 54  HIIHDFQPHVIVHCAAERRPDVVE---NQPDAASQLNVDASGNLAKEAAAVGA--FLIYI 108

Query: 114 S 114
           S
Sbjct: 109 S 109

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 57.0 bits (138), Expect = 6e-10
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             +LV+G +GY+G      L++ G+               V R   ++       +    
Sbjct: 12  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK----HHIPFYE 67

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
            D+ D R  ++  F  +    VI H A L       +     P R++  N+ G   +++ 
Sbjct: 68  VDLCD-RKGLEKVFKEYKIDSVI-HFAGLKAVGESTQ----IPLRYYHNNILGTVVLLEL 121

Query: 101 AKETKTVEKIIYTSS 115
            ++   V K +++SS
Sbjct: 122 MQQYN-VSKFVFSSS 135

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 55.5 bits (135), Expect = 1e-09
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 36/134 (26%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             IL+ G +GY+G      L+ +G SV             +               +   
Sbjct: 2   NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE-----------GAKFYN 50

Query: 51  GDVTDYRSLVDACFGCHVI---FHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAA 101
           GD+ D ++ +   F    I    H AA       +E     P +++  NV G   +++  
Sbjct: 51  GDLRD-KAFLRDVFTQENIEAVMHFAADSLVGVSME----KPLQYYNNNVYGALCLLEVM 105

Query: 102 KETKTVEKIIYTSS 115
            E K V+K I++S+
Sbjct: 106 DEFK-VDKFIFSST 118

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             ILV+G +GY+G      LL  G+ V          R  + R   I+G           
Sbjct: 6   GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG----KTPAFHE 61

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
            DV+D    +   F  H     I H AAL      V      P  ++  N++ L ++++ 
Sbjct: 62  TDVSD-ERALARIFDAHPITAAI-HFAALKAVGESVA----KPIEYYRNNLDSLLSLLRV 115

Query: 101 AKETKTVEKIIYTSS 115
            +E   V++I+++SS
Sbjct: 116 MRERA-VKRIVFSSS 129

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 53.4 bits (129), Expect = 8e-09
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 41/149 (27%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ-GHSV-------------------RALVRRTSDISGL 40
           M++LV G +GY+G     ALL+   HSV                     + R+     G 
Sbjct: 3   MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

Query: 41  PSEGA---LELVYGDVTDYRSLVDACFGCH-----VIFHTAAL------VEPWLPDPSRF 86
               A     L  GDV +    ++  F  H     V+ H  A       V     DP ++
Sbjct: 63  KPPWADRYAALEVGDVRN-EDFLNGVFTRHGPIDAVV-HMCAFLAVGESVR----DPLKY 116

Query: 87  FAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           +  NV G+  ++QA    K  +KII++SS
Sbjct: 117 YDNNVVGILRLLQAMLLHK-CDKIIFSSS 144

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 52.9 bits (128), Expect = 9e-09
 Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 24/119 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  +   L  +   V     +  DI+             +V       
Sbjct: 13  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT-------------NVLAVNKFF 59

Query: 61  DACFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +     +V+ + AA       E         + +N  G KN+  AA       +I+  S
Sbjct: 60  NE-KKPNVVINCAAHTAVDKCE---EQYDLAYKINAIGPKNLAAAAYSVGA--EIVQIS 112

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 22/121 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+ L++GASG LG  L   LL + H V  +   +        +G  +L   D+TD+  L 
Sbjct: 1   MRTLITGASGQLGIELSR-LLSERHEVIKVYNSS------EIQGGYKL---DLTDFPRLE 50

Query: 61  DAC--FGCHVIFHTAAL--V---EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
           D        VI + AA+  V   E    +  + + +N E ++++V+A K   +   I++ 
Sbjct: 51  DFIIKKRPDVIINAAAMTDVDKCE---IEKEKAYKINAEAVRHIVRAGKVIDS--YIVHI 105

Query: 114 S 114
           S
Sbjct: 106 S 106

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 52.1 bits (126), Expect = 2e-08
 Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 24/119 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            +++++GA+G LG +L   L  + + +    ++  DI+             +++  + +V
Sbjct: 6   ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDIT-------------NISQVQQVV 52

Query: 61  DACFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                 H+I H AA       E    +    + +N  G +NV  A++      K++Y S
Sbjct: 53  QE-IRPHIIIHCAAYTKVDQAE---KERDLAYVINAIGARNVAVASQLVGA--KLVYIS 105

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 51.0 bits (123), Expect = 6e-08
 Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 24/173 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR---ALVRR--TSDISGLPSEGALELVYGDVTD 55
            K+L++G  G+LG  L    L QG  +     L R+  T ++  L S G  E V+GD+ +
Sbjct: 2   AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 61

Query: 56  YRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
            ++ V      +     FH A    +   + +P   F +NV G  N+++A ++  +   I
Sbjct: 62  -KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 120

Query: 111 IYTS-----------SFFALGSTDGYIADENQVHEE-KY-FCTQYERSKAVAD 150
           IY+S            +    +    +   N   E  +  F + Y  SK  AD
Sbjct: 121 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 173

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 51.0 bits (123), Expect = 6e-08
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 37/141 (26%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----------------VRRTSDISGLPSEG 44
            K+LV+G +GY+G      LL+ G+    +                +RR  +++G     
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS--- 59

Query: 45  ALELVYGDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGL 94
            +E    D+ D +  +   F  +    VI H A L      V+     P  ++ VN+ G 
Sbjct: 60  -VEFEEMDILD-QGALQRLFKKYSFMAVI-HFAGLKAVGESVQ----KPLDYYRVNLTGT 112

Query: 95  KNVVQAAKETKTVEKIIYTSS 115
             +++  K    V+ ++++SS
Sbjct: 113 IQLLEIMKAHG-VKNLVFSSS 132

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 38/205 (18%), Positives = 71/205 (34%), Gaps = 45/205 (21%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSEGA--LELVYGDVTDYRS 58
           ++V+GA+  +G  L   L+K  +     A  R     + L S     + ++   VT  +S
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKS 65

Query: 59  LVDAC---------FGCHVIFHTAALVEPW----LPDPSRF---FAVNVEGLKNVVQA-- 100
           L              G  ++ + A ++  +     P+ +       VN   +  + Q   
Sbjct: 66  LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125

Query: 101 ------------AKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA- 147
                        + + +   +I  SS   LGS    I D N     ++    Y  SKA 
Sbjct: 126 PLLKNAASKESGDQLSVSRAAVITISS--GLGS----ITD-NTSGSAQFPVLAYRMSKAA 178

Query: 148 ---VADKIALQAASEGLPIVPVYPG 169
                  +A+    + + +V   PG
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPG 203

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 47.6 bits (114), Expect = 7e-07
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
          M+ L++G +G++G  L + L +Q   V    R             +E++  D+ D + + 
Sbjct: 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE-----AKLPNVEMISLDIMDSQRVK 67

Query: 61 DACFGC--HVIFHTAA 74
                    IFH AA
Sbjct: 68 KVISDIKPDYIFHLAA 83

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 25/121 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M IL+ G +G +G  L  +L   G+ + AL   + +              GD ++ + + 
Sbjct: 1   MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKEFC------------GDFSNPKGVA 47

Query: 61  DAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
           +        VI + AA       E    +P     +N   ++ + +AA ET     +++ 
Sbjct: 48  ETVRKLRPDVIVNAAAHTAVDKAE---SEPELAQLLNATSVEAIAKAANETGA--WVVHY 102

Query: 114 S 114
           S
Sbjct: 103 S 103

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 21/117 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-----ALELVYGDVTDYR 57
            LV+GAS   G  +  A +  G +V    RRT  +  L +       A+ L   DVTD  
Sbjct: 8   WLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL---DVTDGE 64

Query: 58  SLVDA------CFGC--HVI-----FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
            +          +G    ++         A  E    +    F ++V G   + +A 
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL 121

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVT 54
           +  LV+G +G  G  L   LL++G+ V  LV R S      +  L  EG ++   GD+ 
Sbjct: 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA 73

Query: 55 DYRSLV 60
          D  S+ 
Sbjct: 74 DACSVQ 79

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVT 54
           K  L++G  G  G  L   LL++G+ V    RR+ +     +  L  E  +++++ D+ 
Sbjct: 3  GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLL 62

Query: 55 DYRSLV 60
          ++ +++
Sbjct: 63 EFSNII 68

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 40/193 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSE--GALELVYGDVTDY-- 56
           ILV+G S  +G  +   L           + R  + +  L  +       V GD+T+   
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSV 64

Query: 57  -RSLVDAC---FGC-HVIFHTAALVEPWLP----DPSRF---FAVNVEGLKNVVQAA--- 101
            + LV+A     G    +   A ++EP       D + +   + +N   + ++V  A   
Sbjct: 65  LKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPE 124

Query: 102 -KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE- 159
            K+T     +++ SS         + A              Y  SKA  +  A+  A+E 
Sbjct: 125 LKKTNG--NVVFVSSDACNMYFSSWGA--------------YGSSKAALNHFAMTLANEE 168

Query: 160 -GLPIVPVYPGVI 171
             +  + V PG++
Sbjct: 169 RQVKAIAVAPGIV 181

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 15/117 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-----------SDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +                    ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 50  YGDVTDYRSLVDACF-GCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
           +GD+ D   L+     G   I H AA   V+  +   S F   NV+G + ++Q A +
Sbjct: 61  HGDIRD-AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD 116

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 22/110 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL- 59
           MKIL+ GASG LG  +    L++   V    R + D++             D+T+  S+ 
Sbjct: 4   MKILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVT------------VDITNIDSIK 50

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                   VDA          + L E      +   +  + G  N+V   
Sbjct: 51  KMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 31/205 (15%), Positives = 63/205 (30%), Gaps = 41/205 (20%)

Query: 1   MK-ILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGL----PSEGALELVYGD 52
           M  IL++G +  LG  L  ALL        +    R       L     +   + ++  D
Sbjct: 21  MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEID 80

Query: 53  VTDYRSLVDAC---------FGCHVIFHTAALVEPWLP----DPSRF---FAVNVEG--- 93
           + ++ +               G +V+F+ A +                     N      
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 140

Query: 94  -----LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA- 147
                L  + +AAK  ++    +  ++   + S  G I          Y       SK+ 
Sbjct: 141 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRT-----SKSA 195

Query: 148 ---VADKIALQAASEGLPIVPVYPG 169
                  +++    + +  V ++PG
Sbjct: 196 LNAATKSLSVDLYPQRIMCVSLHPG 220

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 17/115 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDY---R 57
           I+V+GA   LG  L   L+++GH V  + RR   +         A+  +  D+  +    
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVD 65

Query: 58  SLVDAC---FGCHV--------IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
               A     G                 +         R    N+     V Q  
Sbjct: 66  VAFAAAVEWGG-LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQT 119

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 53/207 (25%)

Query: 3   ILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSD--------ISGLPSEGALELVYG 51
            +++GAS   G  L   L +    G  +  +  R+          +     +  + L   
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVM-LVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 52  DVTDY---RSLVDAC--------FGCHVIFHTAALVEPWLPDP---------SRFFAVNV 91
           D+      + L+ A             ++ + AA +                + ++A+N+
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 92  EGLKNVVQAA----KETKTVEK-IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK 146
             +  +        +++  + K ++  SS  AL    G+           Y C      K
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGL---------Y-CA----GK 173

Query: 147 AVADKIALQAASE--GLPIVPVYPGVI 171
           A  D +    A+E   + ++   PG +
Sbjct: 174 AARDMLYQVLAAEEPSVRVLSYAPGPL 200

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	209
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.98
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.98
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.98
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.98
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.98
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.98
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.98
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.98
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.98
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.98
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.97
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.97
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.97
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.97
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.96
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.96
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.96
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.96
1spx_A	278	Short-chain reductase family member (5L265); paral	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.96
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.95
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.95
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.95
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.95
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.95
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.95
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.95
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.95
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.95
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.95
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.95
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.95
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.95
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.95
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.95
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.95
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.95
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.95
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.95
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.95
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.95
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.95
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.95
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.95
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.95
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.95
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.95
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.95
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.95
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.95
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.95
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.94
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.94
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.94
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.94
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.94
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.94
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.94
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.94
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.94
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.94
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.94
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.94
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.94
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.94
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.94
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.94
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.94
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.94
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.94
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.94
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.94
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.94
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.94
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.94
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.94
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.94
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.94
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.94
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.94
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.94
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.94
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.93
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.93
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.93
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.93
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.93
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.93
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.93
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.93
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.93
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.93
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.93
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.93
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.93
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.93
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.93
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.93
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.93
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.93
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.92
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.92
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.92
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.92
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.92
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.92
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.91
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.91
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.91
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.91
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.91
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.9
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.9
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.9
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.9
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.89
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.88
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.88
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.88
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.87
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.87
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.87
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.87
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.86
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.86
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.86
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.86
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.84
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.84
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.82
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.82
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.8
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.8
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.79
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.74
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.74
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.72
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.64
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.6
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.4
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.34
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.29
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.28
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.21
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.18
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.15
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.06
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.99
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.98
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.97
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.96
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.95
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.94
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.94
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.89
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.8
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.8
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.77
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.77
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.59
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.57
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.57
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.56
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.49
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.41
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.4
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.39
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.37
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.37
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	98.37
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	98.35
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.35
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.33
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.33
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.27
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.26
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	98.22
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.21
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.2
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.19
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.19
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.18
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.15
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.13
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	98.13
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.13
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	98.12
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.12
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.11
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.07
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	98.06
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	98.05
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	98.03
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	98.03
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.02
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	98.01
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.0
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.97
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.96
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.96
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.94
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.93
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.92
1lnq_A	336	MTHK channels, potassium channel related protein;	97.92
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.91
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.89
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.89
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.88
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.87
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.87
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.85
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.85
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.83
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.79
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.77
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.76
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.74
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.74
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.73
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.72
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.71
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.71
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.69
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.67
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.67
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.67
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.67
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.66
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.66
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.62
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.61
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.61
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.6
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.58
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.56
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.55
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.55
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.55
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.54
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.54
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.53
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.52
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.51
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.51
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.5
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.49
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.49
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.48
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.47
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.46
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.45
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.42
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.41
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.4
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.39
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.38
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.37
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.36
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.32
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	97.31
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.3
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.29
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.27
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.27
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.26
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.25
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.25
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.25
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.24
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.24
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.23
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.23
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.23
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.22
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.22
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	97.21
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.21
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.21
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.2
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.19
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.18
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.17
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	97.17
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.17
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.17
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.17
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.15
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.15
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.15
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.14
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.14
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.14
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.13
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.12
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.12
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.12
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.11
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.1
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.1
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.1
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	97.09
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.08
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.08
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.07
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.07
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	97.06
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.06
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.06
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	97.05
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.05
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.05
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.04
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	97.04
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.03
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.01
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.01
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.99
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.97
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.97
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.96
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.96
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.95
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.94
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.94

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.4e-36  Score=239.73  Aligned_cols=204  Identities=20%  Similarity=0.193  Sum_probs=154.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+|||||||||++++++|+++|++|++++|+..+...+.. .+++++.+|++|.+++.++++++|+|||+|+....+.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   92 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRP   92 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTTTCSEEEEC--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCC
Confidence            689999999999999999999999999999998765443322 2689999999999999999999999999999765555


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc--cccCCCcccccc-ccCChHHHHHHHHHHHHHHHh
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG--YIADENQVHEEK-YFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~--~~~~e~~~~~~~-~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                      .++.+.+++|+.++.++++++.+. +.++|||+||..+|+....  .+ +|+.+..+. ...+.|+.+|..+|.+++.+.
T Consensus        93 ~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~  170 (342)
T 2x4g_A           93 RRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDEQAREQA  170 (342)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHHHHHHHh
Confidence            678889999999999999999987 4789999999999986543  33 444432210 014789999999999999886


Q ss_pred             hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC------ceEEEEEEeeeeecC
Q 028444          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH------FSLVFFHCQITCHAI  209 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~i  209 (209)
                      +.+++++++||+++|||+.... . +..++.....+.      ....++|++|+|+++
T Consensus       171 ~~g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  226 (342)
T 2x4g_A          171 RNGLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL  226 (342)
T ss_dssp             HTTCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred             hcCCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence            4499999999999999976211 1 344555555554      345699999999763

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.2e-35  Score=234.13  Aligned_cols=197  Identities=20%  Similarity=0.262  Sum_probs=163.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+|||||||||++++++|+++|++|++++|++.... +   .+++++.+|++ .+++.++++++|+|||+|+..... 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~---~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~-   76 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I---NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ-   76 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS-
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C---CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC-
Confidence            58999999999999999999999999999999844332 2   27999999999 999999999999999999976544 


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh-c
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-E  159 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-~  159 (209)
                       ++.+.+++|+.++.++++++++. ++++|||+||..+|+.....+.+|+.+..   +.+.|+.+|.++|.+++.+.+ .
T Consensus        77 -~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~~~~~~~~~  151 (311)
T 3m2p_A           77 -GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETSLPWNEKELPL---PDLMYGVSKLACEHIGNIYSRKK  151 (311)
T ss_dssp             -SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGGCSBCTTSCCC---CSSHHHHHHHHHHHHHHHHHHHS
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCCC---CCchhHHHHHHHHHHHHHHHHHc
Confidence             77889999999999999999988 47899999999999977666666665433   347899999999999999875 6


Q ss_pred             CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +++++++||+++|||+.... .++..++.....+.         ....|+|++|+|+++
T Consensus       152 g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~  209 (311)
T 3m2p_A          152 GLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSV  209 (311)
T ss_dssp             CCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHH
T ss_pred             CCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHH
Confidence            99999999999999987432 56777777765443         445799999999863

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.7e-36  Score=245.75  Aligned_cols=207  Identities=20%  Similarity=0.289  Sum_probs=168.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCC-CHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|||||||||||++|+++|+++ |++|++++|+..+...+....+++++.+|++ |.+.+.++++++|+|||+|+...+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~  104 (372)
T 3slg_A           25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATP  104 (372)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccH
Confidence            58999999999999999999998 9999999998776555443358999999999 999999999999999999997543


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc----cccccCChHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~e~~  152 (209)
                        +..++.+.+++|+.++.++++++++..  ++|||+||..+|+.....+..|+...    +...+.+.|+.+|.++|.+
T Consensus       105 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~  182 (372)
T 3slg_A          105 ATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRV  182 (372)
T ss_dssp             HHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHH
T ss_pred             HHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHH
Confidence              234677889999999999999999884  89999999999997665555554432    1223445799999999999


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCC-------cchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAASEGLPIVPVYPGVIYGPGKLT-------TGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~~~~~~~~~~rp~~v~g~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++.+.+.+++++++||+++|||+...       ...++..++.....+.         ....|+|++|+|+++
T Consensus       183 ~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  255 (372)
T 3slg_A          183 IWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISAL  255 (372)
T ss_dssp             HHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHH
Confidence            99987559999999999999998532       2456777777666543         445789999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.6e-35  Score=235.67  Aligned_cols=200  Identities=23%  Similarity=0.289  Sum_probs=162.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC--CC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--EP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~--~~   78 (209)
                      |+|||||||||||++++++|+++|++|++++|++....... ..+++++.+|++|.+ +.+++++ |+|||+|+..  ..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            89999999999999999999999999999999765543322 247899999999998 8888888 9999999964  23


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                      ...++...+++|+.++.++++++++. +.++|||+||..+|+.....+.+|+.+..   +.+.|+.+|.++|.+++.+.+
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~---p~~~Y~~sK~~~e~~~~~~~~  153 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADVIPTPEEEPYK---PISVYGAAKAAGEVMCATYAR  153 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCCC---CCSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCCCCCCCCCCCC---CCChHHHHHHHHHHHHHHHHH
Confidence            44677888999999999999999987 47899999999999987666666664433   347899999999999998864


Q ss_pred             -cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcC----------CceEEEEEEeeeeecC
Q 028444          159 -EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQ----------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       159 -~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~dva~~i  209 (209)
                       .+++++++||+++|||+..  ...+..++..+..+          .....|+|++|+|+++
T Consensus       154 ~~g~~~~~lrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  213 (312)
T 3ko8_A          154 LFGVRCLAVRYANVVGPRLR--HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEAT  213 (312)
T ss_dssp             HHCCEEEEEEECEEECTTCC--SSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHH
T ss_pred             HhCCCEEEEeeccccCcCCC--CChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHH
Confidence             5999999999999999764  24555566655443          2345689999999863

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=1.5e-35  Score=239.61  Aligned_cols=205  Identities=20%  Similarity=0.244  Sum_probs=166.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCC------CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSE------GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~------~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |+|||||||||||++++++|+++|++|++++|+.......    ...      .+++++++|++|.+.+.++++++|+||
T Consensus        26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi  105 (351)
T 3ruf_A           26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVL  105 (351)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCEEE
Confidence            5899999999999999999999999999999976532110    000      379999999999999999999999999


Q ss_pred             EcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      |+|+....  ...++...+++|+.++.++++++++. ++++|||+||..+|+.....+.+|+.+..   +.+.|+.+|.+
T Consensus       106 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~---p~~~Y~~sK~~  181 (351)
T 3ruf_A          106 HQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPALPKVEENIGN---PLSPYAVTKYV  181 (351)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCC---CCSHHHHHHHH
T ss_pred             ECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCCCCCccCCCCC---CCChhHHHHHH
Confidence            99996422  33466778999999999999999988 47899999999999987766666665432   34789999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       149 ~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +|.+++.+.+ .+++++++||+++|||+....   ..++..++.....+.         ....|+|++|+|+++
T Consensus       182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~  255 (351)
T 3ruf_A          182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN  255 (351)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence            9999998864 599999999999999976432   245666766665444         345689999999863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.1e-35  Score=238.30  Aligned_cols=198  Identities=25%  Similarity=0.280  Sum_probs=162.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|||||||||||++++++|+++|++|++++|+...       .+++++.+|++|.+.+.++++++|+|||+|+......
T Consensus        20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~   92 (347)
T 4id9_A           20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAP   92 (347)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcch
Confidence            589999999999999999999999999999998654       2688999999999999999999999999999866555


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc--CCccccCCCccccccccCChHHHHHHHHHHHHHHHh-
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS--TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA-  157 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~--~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-  157 (209)
                      ..+...+++|+.++.++++++++. +.++|||+||..+|+.  ....+.+|+.+..   +.+.|+.+|.++|.+++.+. 
T Consensus        93 ~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~---~~~~Y~~sK~~~E~~~~~~~~  168 (347)
T 4id9_A           93 ADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEVYPENRPEFLPVTEDHPLC---PNSPYGLTKLLGEELVRFHQR  168 (347)
T ss_dssp             GGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGTTTTSCSSSSBCTTSCCC---CCSHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHHhCCCCCCCCCcCCCCCCC---CCChHHHHHHHHHHHHHHHHH
Confidence            556789999999999999999987 5789999999999987  3445555554432   34789999999999999886 


Q ss_pred             hcCCCEEEEecCcee-------------cCCCCC----------cchhHHHHHHHHhcCCceE---------EE----EE
Q 028444          158 SEGLPIVPVYPGVIY-------------GPGKLT----------TGNLVAKLVRLLFSQHFSL---------VF----FH  201 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~-------------g~~~~~----------~~~~~~~~~~~~~~~~~~~---------~~----~~  201 (209)
                      +.+++++++||+++|             ||+...          ...++..++.....+....         .|    +|
T Consensus       169 ~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~  248 (347)
T 4id9_A          169 SGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITD  248 (347)
T ss_dssp             HSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEE
T ss_pred             hcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEe
Confidence            468999999999999             875322          1356677777776665432         34    99


Q ss_pred             EeeeeecC
Q 028444          202 CQITCHAI  209 (209)
Q Consensus       202 ~~dva~~i  209 (209)
                      ++|+|+++
T Consensus       249 v~Dva~ai  256 (347)
T 4id9_A          249 TRDMVAGI  256 (347)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=5e-35  Score=237.59  Aligned_cols=202  Identities=20%  Similarity=0.216  Sum_probs=163.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh--CCCeEEEEEcCCCC-------CCCCC-----CCCceEEEEccCCCHHHHHHH-hcC
Q 028444            1 MKILVSGASGYLGGRLCHALLK--QGHSVRALVRRTSD-------ISGLP-----SEGALELVYGDVTDYRSLVDA-CFG   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~--~g~~V~~~~r~~~~-------~~~~~-----~~~~~~~~~~Dl~~~~~~~~~-~~~   65 (209)
                      |+||||||+||||++++++|++  +|++|++++|+...       .+.+.     ...++.++.+|++|.+.+..+ ..+
T Consensus        11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   90 (362)
T 3sxp_A           11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLH   90 (362)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccC
Confidence            5899999999999999999999  99999999996541       11111     113679999999999999998 789


Q ss_pred             cCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      +|+|||||+....+..++...+++|+.++.++++++++.. .+ |||+||..+|+.... +.+|+.+.   .+.+.|+.+
T Consensus        91 ~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~-~~~E~~~~---~p~~~Y~~s  164 (362)
T 3sxp_A           91 FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKA-PNVVGKNE---SPENVYGFS  164 (362)
T ss_dssp             CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCS-SBCTTSCC---CCSSHHHHH
T ss_pred             CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCC-CCCCCCCC---CCCChhHHH
Confidence            9999999997666667888999999999999999999874 44 999999999987665 55555433   234789999


Q ss_pred             HHHHHHHHHHHhhcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          146 KAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       146 K~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      |.++|.+++.+.+. ++++++||+++|||+....   ..++..++.....+.         ....|+|++|+|+++
T Consensus       165 K~~~E~~~~~~~~~-~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai  239 (362)
T 3sxp_A          165 KLCMDEFVLSHSND-NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQAN  239 (362)
T ss_dssp             HHHHHHHHHHTTTT-SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhcc-CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHH
Confidence            99999999998765 8999999999999986432   155677776665443         445789999999864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1.3e-34  Score=231.31  Aligned_cols=200  Identities=21%  Similarity=0.233  Sum_probs=160.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (209)
                      |+|||||||||||++++++|+++|++|++++|+... ..+    +++++.+|++|.+.+.+++++  +|+|||||+....
T Consensus        13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   87 (321)
T 2pk3_A           13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP----NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSV   87 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT----TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc----eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccch
Confidence            589999999999999999999999999999998664 221    689999999999999999876  9999999997532


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccC--CccccCCCccccccccCChHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST--DGYIADENQVHEEKYFCTQYERSKAVADKIAL  154 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~--~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (209)
                        ...++.+.+++|+.++.++++++.+..+.++||++||..+|+..  ...+.+|+.+.+   +.+.|+.+|.++|.+++
T Consensus        88 ~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~---~~~~Y~~sK~~~E~~~~  164 (321)
T 2pk3_A           88 KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLR---PMSPYGVSKASVGMLAR  164 (321)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB---CCSHHHHHHHHHHHHHH
T ss_pred             hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC---CCCccHHHHHHHHHHHH
Confidence              34577889999999999999999765346899999999999865  445555654332   34689999999999998


Q ss_pred             HHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhc---C-----------CceEEEEEEeeeeecC
Q 028444          155 QAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFS---Q-----------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       155 ~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~dva~~i  209 (209)
                      .++ +.+++++++||+++|||+... ..++..++.....   +           .....++|++|+|+++
T Consensus       165 ~~~~~~gi~~~ilrp~~v~g~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~  233 (321)
T 2pk3_A          165 QYVKAYGMDIIHTRTFNHIGPGQSL-GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAY  233 (321)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHH
T ss_pred             HHHHHcCCCEEEEEeCcccCcCCCC-CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHH
Confidence            876 459999999999999998643 2344445444333   3           3356789999999763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.4e-34  Score=232.48  Aligned_cols=205  Identities=20%  Similarity=0.221  Sum_probs=161.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCC--CCC---CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS--DIS---GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~--~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+||||||+||||++++++|+++|  ++|++++|+..  ..+   .+....+++++.+|++|.+.+.+++.++|+|||||
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLA   83 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEECC
Confidence            689999999999999999999986  89999998642  111   12222478999999999999999999999999999


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      +....  ...++.+++++|+.++.++++++.+....++||++||..+|+.....+.+|+.+..   +.+.|+.+|.++|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           84 AESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLM---PSSPYSATKAASDM  160 (336)
T ss_dssp             CCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCC---CCSHHHHHHHHHHH
T ss_pred             CCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCC---CCCccHHHHHHHHH
Confidence            96432  23467789999999999999999987434799999999999875444555554332   34689999999999


Q ss_pred             HHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          152 IALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       152 ~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +++.+.+ .+++++++||+++|||+... ..++..++.....+.         ....|+|++|+|+++
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  227 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFP-EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAI  227 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCT-TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHH
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCc-CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHH
Confidence            9998764 58999999999999998643 345666666665443         235789999999763

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-34  Score=232.71  Aligned_cols=204  Identities=24%  Similarity=0.280  Sum_probs=160.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCC--C---CCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD--I---SGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~--~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~   71 (209)
                      |+|||||||||||++|+++|+++|  ++|++++|....  .   ..+....+++++++|++|.+.+.+++++  +|+|||
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  104 (346)
T 4egb_A           25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVN  104 (346)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEE
Confidence            589999999999999999999999  778888776421  1   1122225899999999999999999987  999999


Q ss_pred             cCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccC-CccccCCCccccccccCChHHHHHHH
Q 028444           72 TAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-DGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~-~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      +|+....  ...++...+++|+.++.++++++++. +.++|||+||..+|+.. ...+.+|+.+.   .+.+.|+.+|.+
T Consensus       105 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~~~~~~~E~~~~---~p~~~Y~~sK~~  180 (346)
T 4egb_A          105 FAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLGKTGRFTEETPL---APNSPYSSSKAS  180 (346)
T ss_dssp             CCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCCSSCCBCTTSCC---CCCSHHHHHHHH
T ss_pred             CCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCCcCCCcCCCCCC---CCCChhHHHHHH
Confidence            9997533  34677889999999999999999998 57899999999999875 34455555433   234789999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       149 ~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +|.+++.+.+ .+++++++||+++|||+... ..++..++.....+.         ....|+|++|+|+++
T Consensus       181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  250 (346)
T 4egb_A          181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYP-EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAI  250 (346)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeecceeCcCCCc-cchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHH
Confidence            9999999875 59999999999999998743 356777777666544         345689999999863

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.3e-34  Score=231.43  Aligned_cols=204  Identities=26%  Similarity=0.322  Sum_probs=161.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC---C---CeEEEEEcCCCC-----CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ---G---HSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~---g---~~V~~~~r~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |+|+|||||||||++++++|+++   |   ++|++++|+...     +..+....+++++.+|++|.+.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            89999999999999999999997   8   999999986421     111111247899999999999999999999999


Q ss_pred             EEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        70 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      ||||+....  ...++.+++++|+.++.++++++.+. +.++|||+||..+|+.....+.+|+.+..   +.+.|+.+|.
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~---~~~~Y~~sK~  156 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGSWTESSPLE---PNSPYAASKA  156 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSCBCTTSCCC---CCSHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCCCCCCCCCCCCC---CCCchHHHHH
Confidence            999996432  22467789999999999999999988 46899999999999865444555544322   3467999999


Q ss_pred             HHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          148 VADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       148 ~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++|.+++.+. +.+++++++||+++|||+... ..++..++.....+.         ....|+|++|+|+++
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  227 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC-CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence            9999998876 459999999999999998643 345666666655443         345789999999763

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-34  Score=230.39  Aligned_cols=199  Identities=16%  Similarity=0.196  Sum_probs=158.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC--C
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--E   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~--~   77 (209)
                      |+|||||||||||++++++|+++|+ ++++.+ +........  .+++++.+|++| +++.++++++|+|||+|+..  .
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~~--~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~   77 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFVN--EAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVR   77 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGSC--TTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhcC--CCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChh
Confidence            3799999999999999999999995 555554 433332222  379999999999 89999999999999999964  3


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                      ....++...+++|+.++.++++++++. +.++|||+||..+|+.....+.+|+.+..   +.+.|+.+|.++|.+++.++
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~~~  153 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAKVIPTPEDYPTH---PISLYGASKLACEALIESYC  153 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCSSSSBCTTSCCC---CCSHHHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHH
Confidence            345678889999999999999999987 47899999999999977666666655332   34779999999999999886


Q ss_pred             -hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcC----------CceEEEEEEeeeeecC
Q 028444          158 -SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQ----------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       158 -~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~dva~~i  209 (209)
                       +.+++++++||+++|||+..  ..++..++.....+          +....|+|++|+|+++
T Consensus       154 ~~~g~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  214 (313)
T 3ehe_A          154 HTFDMQAWIYRFANVIGRRST--HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAM  214 (313)
T ss_dssp             HHTTCEEEEEECSCEESTTCC--CSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHH
T ss_pred             HhcCCCEEEEeeccccCcCCC--cChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHH
Confidence             46999999999999999764  24556666555433          3445789999999863

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1e-34  Score=233.87  Aligned_cols=207  Identities=21%  Similarity=0.298  Sum_probs=162.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCC-HHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++++++|+++ |++|++++|+..+...+....+++++++|++| .+.+.++++++|+|||||+...+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            89999999999999999999998 89999999987654433333479999999998 45688888899999999996532


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc----cccccCChHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~e~~  152 (209)
                        ...++.+++++|+.++.++++++++. + ++|||+||..+|+.....+.+|+.+.    +...+.+.|+.+|..+|.+
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~  158 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  158 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHH
Confidence              22466778999999999999999987 4 79999999999987655555555432    1122345799999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCC-------cchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLT-------TGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++.+. +.+++++++||+++|||+...       ....+..++.....+.         ....|+|++|+|+++
T Consensus       159 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  232 (345)
T 2bll_A          159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence            98876 459999999999999997532       1345666666555443         445789999999763

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=8.8e-35  Score=235.62  Aligned_cols=205  Identities=19%  Similarity=0.281  Sum_probs=162.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~   74 (209)
                      |+||||||+||||++++++|+++|++|++++|+..+...+.    ...+++++++|++|.+++.+++++  +|+|||||+
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~   89 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   89 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECCC
Confidence            68999999999999999999999999999999876543211    123789999999999999999886  899999999


Q ss_pred             cCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc-cccCCCccccccccCChHHHHHHHHHH
Q 028444           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      ....  ...++...+++|+.++.++++++.+....++||++||..+|+.... .+.+|+.+..   +.+.|+.+|.++|.
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~  166 (357)
T 1rkx_A           90 QPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG---GYDPYSNSKGCAEL  166 (357)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC---CSSHHHHHHHHHHH
T ss_pred             CcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCC---CCCccHHHHHHHHH
Confidence            5321  2346678899999999999999998743689999999999986543 2344433222   34779999999999


Q ss_pred             HHHHHhh----------cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCc--------eEEEEEEeeeeec
Q 028444          152 IALQAAS----------EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHF--------SLVFFHCQITCHA  208 (209)
Q Consensus       152 ~~~~~~~----------~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~dva~~  208 (209)
                      +++.+.+          .+++++++||+++|||+......++..++.....+..        ...|+|++|+|++
T Consensus       167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a  241 (357)
T 1rkx_A          167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG  241 (357)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred             HHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHH
Confidence            9988753          3899999999999999864334567777776655443        3468999999876

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=3e-34  Score=229.99  Aligned_cols=203  Identities=19%  Similarity=0.243  Sum_probs=160.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~   77 (209)
                      |+|+||||+||||++++++|+++|++|++++|+..... .+.  .+++++.+|++|.+.+.++++  ++|+|||+|+...
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT--EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC--TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC--CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            58999999999999999999999999999998754322 222  268999999999999999998  8999999999643


Q ss_pred             C--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           78 P--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        78 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      .  ...++.+++++|+.++.++++++++. +.++||++||..+|+.....+.+|+.+..   +.+.|+.+|.++|.+++.
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVDVDLITEETMTN---PTNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCSSSSBCTTSCCC---CSSHHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCCCCCCCcCCCCC---CCChHHHHHHHHHHHHHH
Confidence            2  22466788999999999999999987 57899999999999876555566655432   347899999999999998


Q ss_pred             Hhh-cCCCEEEEecCceecCCCCC--------cchhHHHHHHHHh----------------cCCceEEEEEEeeeeecC
Q 028444          156 AAS-EGLPIVPVYPGVIYGPGKLT--------TGNLVAKLVRLLF----------------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       156 ~~~-~~~~~~~~rp~~v~g~~~~~--------~~~~~~~~~~~~~----------------~~~~~~~~~~~~dva~~i  209 (209)
                      +.+ .+++++++||+++|||+...        ...++..++....                .++....|+|++|+|+++
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~  234 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAH  234 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHH
Confidence            864 48999999999999996311        1345555544333                133456799999999763

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2e-34  Score=232.02  Aligned_cols=205  Identities=19%  Similarity=0.227  Sum_probs=160.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |+||||||+||||++++++|+++|++|++++|+..+......      ..++.++++|++|.+++.++++  ++|+||||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            589999999999999999999999999999997654432110      1368999999999999999998  89999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      |+....  ...++.+.+++|+.++.++++++++. +.++|||+||..+|+.....+.+|+.+..   +.+.|+.+|.++|
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~~---~~~~Y~~sK~~~e  161 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPERSPIDETFPLS---ATNPYGQTKLMAE  161 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCSSSSBCTTSCCB---CSSHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCCCCCCCCCCCCC---CCChhHHHHHHHH
Confidence            997432  23456678999999999999999987 47899999999999876666666655433   3478999999999


Q ss_pred             HHHHHHhh-c-CCCEEEEecCceecCCCCC---------cchhHHHHHHHHh----------------cCCceEEEEEEe
Q 028444          151 KIALQAAS-E-GLPIVPVYPGVIYGPGKLT---------TGNLVAKLVRLLF----------------SQHFSLVFFHCQ  203 (209)
Q Consensus       151 ~~~~~~~~-~-~~~~~~~rp~~v~g~~~~~---------~~~~~~~~~~~~~----------------~~~~~~~~~~~~  203 (209)
                      .+++.+++ . +++++++||+++|||+...         ...+++.+.....                .+.....|+|++
T Consensus       162 ~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~  241 (341)
T 3enk_A          162 QILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVV  241 (341)
T ss_dssp             HHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred             HHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHH
Confidence            99998864 4 4999999999999995421         1234443333232                234556799999


Q ss_pred             eeeecC
Q 028444          204 ITCHAI  209 (209)
Q Consensus       204 dva~~i  209 (209)
                      |+|+++
T Consensus       242 Dva~a~  247 (341)
T 3enk_A          242 DLARGH  247 (341)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.2e-33  Score=230.86  Aligned_cols=206  Identities=17%  Similarity=0.129  Sum_probs=161.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCC-
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW-   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~-   79 (209)
                      |+|+||||+||||++++++|+++|++|++++|+..+..... ..+++++.+|++|.+.+.++++++|+|||+|+..... 
T Consensus        30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~  108 (379)
T 2c5a_A           30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMG  108 (379)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHH
T ss_pred             CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHhCCCCEEEECceecCccc
Confidence            58999999999999999999999999999999866543221 2368999999999999999999999999999975431 


Q ss_pred             --CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc-----cccCCCccccccccCChHHHHHHHHHHH
Q 028444           80 --LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-----YIADENQVHEEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        80 --~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~-----~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  152 (209)
                        ..++.+.+++|+.++.++++++++. +.++|||+||..+|+....     .+.+|+... +..+.+.|+.+|.++|.+
T Consensus       109 ~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~-~~~~~~~Y~~sK~~~E~~  186 (379)
T 2c5a_A          109 FIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAW-PAEPQDAFGLEKLATEEL  186 (379)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS-SBCCSSHHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCCccCCCcCcccCC-CCCCCChhHHHHHHHHHH
Confidence              4677889999999999999999987 5789999999999985432     223333211 122347899999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC----------ceEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH----------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~----------~~~~~~~~~dva~~i  209 (209)
                      ++.+. +.+++++++||+++|||+....   ...+..++.....+.          ....|+|++|+|+++
T Consensus       187 ~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai  257 (379)
T 2c5a_A          187 CKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV  257 (379)
T ss_dssp             HHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHH
Confidence            98876 4599999999999999976321   125666666654443          345689999999763

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=4.3e-34  Score=227.51  Aligned_cols=203  Identities=24%  Similarity=0.305  Sum_probs=158.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~   77 (209)
                      |+||||||+||||++++++|+++|++|++++|.... ...+.  .+++++++|++|.+++.++++  ++|+|||+|+...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   78 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP--KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC--TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc--cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence            899999999999999999999999999999885432 22222  367889999999999999887  8999999999643


Q ss_pred             C--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc-eeecc-CCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           78 P--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FALGS-TDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        78 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~-~~~~~-~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                      .  ...++...+++|+.++.++++++++. +.++||++||. .+|+. ....+.+|+.+..   +.+.|+.+|.++|.++
T Consensus        79 ~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           79 VKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPEGERAEETWPPR---PKSPYAASKAAFEHYL  154 (311)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCC---CCSHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCCCCCcCCCCCCC---CCChHHHHHHHHHHHH
Confidence            2  23466788999999999999999987 47899999998 88875 3334445544322   3467999999999999


Q ss_pred             HHHh-hcCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcCC--------------ceEEEEEEeeeeecC
Q 028444          154 LQAA-SEGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQH--------------FSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~-~~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~~--------------~~~~~~~~~dva~~i  209 (209)
                      +.+. +.+++++++||+++|||+....  ..++..++.....+.              ....|+|++|+|+++
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  227 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAH  227 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHH
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHH
Confidence            8876 4599999999999999976432  235555555544332              345789999999763

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=2e-34  Score=233.14  Aligned_cols=204  Identities=22%  Similarity=0.312  Sum_probs=161.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-CCC-------C--CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLP-------S--EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~-------~--~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |+|||||||||||++++++|+++|++|++++|+..... .+.       .  ..+++++.+|++|.+++.++++++|+||
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi  107 (352)
T 1sb8_A           28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVL  107 (352)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEEE
Confidence            58999999999999999999999999999999754211 000       0  1378999999999999999999999999


Q ss_pred             EcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      |||+....  ...++...+++|+.++.++++++.+. +.++||++||..+|+.....+.+|+.+..   +.+.|+.+|.+
T Consensus       108 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~~  183 (352)
T 1sb8_A          108 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIGK---PLSPYAVTKYV  183 (352)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCC---CCSHHHHHHHH
T ss_pred             ECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCCCCCCCCCCCC---CCChhHHHHHH
Confidence            99996432  22467788999999999999999987 57899999999999876655566655432   34789999999


Q ss_pred             HHHHHHHHh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC---------ceEEEEEEeeeeec
Q 028444          149 ADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH---------FSLVFFHCQITCHA  208 (209)
Q Consensus       149 ~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~  208 (209)
                      +|.+++.++ +.+++++++||+++|||+....   ..++..++.....+.         ....|+|++|+|++
T Consensus       184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  256 (352)
T 1sb8_A          184 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA  256 (352)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            999998876 4599999999999999976432   245566666555443         33468999999975

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=5.1e-34  Score=232.92  Aligned_cols=208  Identities=19%  Similarity=0.225  Sum_probs=154.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCC-CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++++++|+++| ++|++++|+..... .+....+++++.+|++|.+.+.++++++|+|||+|+....
T Consensus        33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~  112 (377)
T 2q1s_A           33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGN  112 (377)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCccCc
Confidence            589999999999999999999999 99999999765421 2221347999999999999999999999999999996432


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccC--CCcccccc-ccCChHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD--ENQVHEEK-YFCTQYERSKAVADKIA  153 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~--e~~~~~~~-~~~~~Y~~sK~~~e~~~  153 (209)
                        ...++.+.+++|+.++.++++++++..+.++||++||..+|+.....+.+  |+.+..+. .+.+.|+.+|.++|.++
T Consensus       113 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~  192 (377)
T 2q1s_A          113 QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYS  192 (377)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHH
Confidence              12466788999999999999999876236899999999999876544444  54311011 23478999999999999


Q ss_pred             HHHh-hcCCCEEEEecCceecCCC---------CCc---chhHHHHHHHHhcCC---------ceEEEEEEeeeeec
Q 028444          154 LQAA-SEGLPIVPVYPGVIYGPGK---------LTT---GNLVAKLVRLLFSQH---------FSLVFFHCQITCHA  208 (209)
Q Consensus       154 ~~~~-~~~~~~~~~rp~~v~g~~~---------~~~---~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~  208 (209)
                      +.+. +.+++++++||+++|||+.         ...   ..++..++.....+.         ....|+|++|+|++
T Consensus       193 ~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a  269 (377)
T 2q1s_A          193 VYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANG  269 (377)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHH
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence            8876 4599999999999999976         210   245666666655443         44578999999986

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.4e-35  Score=223.30  Aligned_cols=196  Identities=16%  Similarity=0.176  Sum_probs=148.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+|||||||||++++++|+++|++|++++|++.+...+.  .+++++++|++|.+++.++++++|+|||+|+...   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~---   79 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW---   79 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC---
Confidence            58999999999999999999999999999999877655443  4899999999999999999999999999998642   


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh-hc
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~  159 (209)
                      .+ .+.+++|+.++.++++++++. +.++||++||..+|....+...++...    .+.+.|+.+|..+|.+.+.+. +.
T Consensus        80 ~~-~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~----~p~~~Y~~sK~~~e~~~~~~~~~~  153 (227)
T 3dhn_A           80 NN-PDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMDSGE----VPENILPGVKALGEFYLNFLMKEK  153 (227)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGGTTC----SCGGGHHHHHHHHHHHHHTGGGCC
T ss_pred             CC-hhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCccccCCc----chHHHHHHHHHHHHHHHHHHhhcc
Confidence            12 237899999999999999988 478999999988776544333222222    233679999999999988887 56


Q ss_pred             CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeecC
Q 028444          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  209 (209)
                      +++++++||+++|||+..... +..........+ ....|+|++|+|+++
T Consensus       154 ~~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~-~~~~~i~~~Dva~ai  201 (227)
T 3dhn_A          154 EIDWVFFSPAADMRPGVRTGR-YRLGKDDMIVDI-VGNSHISVEDYAAAM  201 (227)
T ss_dssp             SSEEEEEECCSEEESCCCCCC-CEEESSBCCCCT-TSCCEEEHHHHHHHH
T ss_pred             CccEEEEeCCcccCCCccccc-eeecCCCcccCC-CCCcEEeHHHHHHHH
Confidence            999999999999999763211 100000000011 125689999998763

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1e-33  Score=227.35  Aligned_cols=206  Identities=20%  Similarity=0.135  Sum_probs=161.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a   73 (209)
                      |+||||||+||||++++++|+++|++|++++|+..+..     .+....+++++.+|++|.+++.+++++  +|+|||+|
T Consensus        15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A   94 (335)
T 1rpn_A           15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   94 (335)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence            68999999999999999999999999999999765421     111123689999999999999998885  69999999


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      +....  ...++...+++|+.++.++++++.+....++||++||..+|+.....+.+|+.+..   +.+.|+.+|.++|.
T Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~---p~~~Y~~sK~~~e~  171 (335)
T 1rpn_A           95 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY---PRSPYGVAKLYGHW  171 (335)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC---CCSHHHHHHHHHHH
T ss_pred             cccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCC---CCChhHHHHHHHHH
Confidence            96533  24567789999999999999999987323799999999999876655556654332   34679999999999


Q ss_pred             HHHHHhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcCC----------ceEEEEEEeeeeecC
Q 028444          152 IALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQH----------FSLVFFHCQITCHAI  209 (209)
Q Consensus       152 ~~~~~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~~dva~~i  209 (209)
                      +++.+.+ .+++++++||+.+|||+....  ...+..++.....+.          ....|+|++|+|+++
T Consensus       172 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~  242 (335)
T 1rpn_A          172 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM  242 (335)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHH
Confidence            9998864 599999999999999975321  123445555444333          345789999999763

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.6e-33  Score=228.39  Aligned_cols=205  Identities=18%  Similarity=0.256  Sum_probs=159.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCC--CCCC---CCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTS--DISG---LPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~--~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |+||||||+||||++++++|+++ |++|++++|+..  ..+.   +....+++++.+|++|.+++.++++  ++|+||||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            89999999999999999999998 799999998642  2211   2122478999999999999999998  89999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcC-Ccc-------EEEEEccceeeccCCc--c--------ccCCCcc
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK-TVE-------KIIYTSSFFALGSTDG--Y--------IADENQV  132 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-------~~i~~ss~~~~~~~~~--~--------~~~e~~~  132 (209)
                      |+....  ...++.+++++|+.++.++++++.+.+ +++       +||++||..+|+....  .        +.+|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            997532  234677899999999999999998862 234       9999999999986431  1        3444433


Q ss_pred             ccccccCChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEE
Q 028444          133 HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHC  202 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  202 (209)
                      .   .+.+.|+.+|.++|.+++.+++ .+++++++||+++|||+... ..++..++.....+.         ....++|+
T Consensus       161 ~---~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  236 (361)
T 1kew_A          161 Y---APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (361)
T ss_dssp             C---CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred             C---CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc-ccHHHHHHHHHHcCCCceEcCCCceeEeeEEH
Confidence            2   2347899999999999998764 59999999999999998643 245566666555443         34579999


Q ss_pred             eeeeecC
Q 028444          203 QITCHAI  209 (209)
Q Consensus       203 ~dva~~i  209 (209)
                      +|+|+++
T Consensus       237 ~Dva~a~  243 (361)
T 1kew_A          237 EDHARAL  243 (361)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999763

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=2.6e-34  Score=231.14  Aligned_cols=208  Identities=26%  Similarity=0.367  Sum_probs=147.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+||||||+||||++++++|+++|++|+++.|+..+....      ....+++++++|++|.+.+.++++++|+|||+|+
T Consensus        10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~   89 (338)
T 2rh8_A           10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVAT   89 (338)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEESS
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeCC
Confidence            5799999999999999999999999999999976543211      1113688999999999999999999999999999


Q ss_pred             cCCCCCCCcc-chhhhHHHHHHHHHHHHHhcCCccEEEEEcccee-eccCC-c--cccCCCccccc------cccCChHH
Q 028444           75 LVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA-LGSTD-G--YIADENQVHEE------KYFCTQYE  143 (209)
Q Consensus        75 ~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~-~~~~~-~--~~~~e~~~~~~------~~~~~~Y~  143 (209)
                      .......++. +++++|+.++.++++++.+.+++++|||+||..+ |+... +  .+.+|+.+.+.      .++.+.|+
T Consensus        90 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  169 (338)
T 2rh8_A           90 PVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYP  169 (338)
T ss_dssp             CCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCT
T ss_pred             ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHH
Confidence            6533333443 4899999999999999998744789999999874 43211 1  24455432211      11112599


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc-chhHHHHHHHHhcCC--------------ceEEEEEEeeeee
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQH--------------FSLVFFHCQITCH  207 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~dva~  207 (209)
                      .+|.++|.+++++.+ .+++++++||+.+|||+.... ...+..+. ....++              ....|+|++|+|+
T Consensus       170 ~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~  248 (338)
T 2rh8_A          170 ASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEFLINGMKGMQMLSGSVSIAHVEDVCR  248 (338)
T ss_dssp             TSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccccccccccccccCcccEEEHHHHHH
Confidence            999999999988764 599999999999999976321 22222111 111111              1237999999997


Q ss_pred             cC
Q 028444          208 AI  209 (209)
Q Consensus       208 ~i  209 (209)
                      ++
T Consensus       249 a~  250 (338)
T 2rh8_A          249 AH  250 (338)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=2.3e-33  Score=226.37  Aligned_cols=206  Identities=17%  Similarity=0.214  Sum_probs=159.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC------CCC----CC--CCCceEEEEccCCCHHHHHHHhc--Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISG----LP--SEGALELVYGDVTDYRSLVDACF--GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~------~~~----~~--~~~~~~~~~~Dl~~~~~~~~~~~--~~   66 (209)
                      |+|+||||+||||++++++|+++|++|++++|+...      ...    +.  ...+++++.+|++|.+++.++++  ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            489999999999999999999999999999986543      110    00  01368899999999999999988  89


Q ss_pred             CEEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           67 HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        67 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |+|||+|+....  ...++.+.+++|+.++.++++++++. +.++||++||..+|+.....+.+|+.+..+  ..+.|+.
T Consensus        83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p--~~~~Y~~  159 (348)
T 1ek6_A           83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYLPLDEAHPTGG--CTNPYGK  159 (348)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSSSBCTTSCCCC--CSSHHHH
T ss_pred             CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCCCCCcCCCCCCCC--CCCchHH
Confidence            999999996432  23466788999999999999999887 478999999999998765555666543221  1467999


Q ss_pred             HHHHHHHHHHHHhhcC--CCEEEEecCceecCCCC------C---cchhHHHHHHHHh----------------cCCceE
Q 028444          145 SKAVADKIALQAASEG--LPIVPVYPGVIYGPGKL------T---TGNLVAKLVRLLF----------------SQHFSL  197 (209)
Q Consensus       145 sK~~~e~~~~~~~~~~--~~~~~~rp~~v~g~~~~------~---~~~~~~~~~~~~~----------------~~~~~~  197 (209)
                      +|.++|.+++.+.+.+  ++++++||+++|||+..      .   ...++..++....                .++...
T Consensus       160 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  239 (348)
T 1ek6_A          160 SKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred             HHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEE
Confidence            9999999999886445  99999999999999531      0   1245555555444                234456


Q ss_pred             EEEEEeeeeecC
Q 028444          198 VFFHCQITCHAI  209 (209)
Q Consensus       198 ~~~~~~dva~~i  209 (209)
                      .|+|++|+|+++
T Consensus       240 ~~i~v~Dva~a~  251 (348)
T 1ek6_A          240 DYIHVVDLAKGH  251 (348)
T ss_dssp             CEEEHHHHHHHH
T ss_pred             eeEEHHHHHHHH
Confidence            799999999763

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=2.2e-34  Score=231.47  Aligned_cols=208  Identities=21%  Similarity=0.224  Sum_probs=158.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEE-EccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELV-YGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~-~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+||||||+||||++++++|+++|++|++++|+..+...+..      ..+++++ .+|++|.+.+.++++++|+|||||
T Consensus        12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A   91 (342)
T 1y1p_A           12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIA   91 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEeC
Confidence            589999999999999999999999999999997543211100      1368888 899999999999999999999999


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC----ccccCCCccc-------------ccc
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD----GYIADENQVH-------------EEK  136 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~----~~~~~e~~~~-------------~~~  136 (209)
                      +..... .++.+.+++|+.++.++++++.+..+.++||++||..+|+...    +.+.+|+.+.             .+.
T Consensus        92 ~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~  170 (342)
T 1y1p_A           92 SVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQ  170 (342)
T ss_dssp             CCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTT
T ss_pred             CCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccc
Confidence            975432 4677899999999999999998643568999999998885332    1344454321             011


Q ss_pred             ccCChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCcc--hhHHHHHHHHhcCC--------ceEEEEEEe
Q 028444          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTG--NLVAKLVRLLFSQH--------FSLVFFHCQ  203 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~  203 (209)
                      .+.+.|+.+|.++|.+++.+.+.   +++++++||+++|||......  ..+..++.....++        ....|+|++
T Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  250 (342)
T 1y1p_A          171 KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHH
Confidence            23467999999999999887643   789999999999999764321  25666666654443        356899999


Q ss_pred             eeeecC
Q 028444          204 ITCHAI  209 (209)
Q Consensus       204 dva~~i  209 (209)
                      |+|+++
T Consensus       251 Dva~a~  256 (342)
T 1y1p_A          251 DIGLLH  256 (342)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999763

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=2.8e-33  Score=225.89  Aligned_cols=203  Identities=21%  Similarity=0.248  Sum_probs=158.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCCC--CCCCCC--CCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~~--~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+||||||+||||++++++|+++  |++|++++|+...  ...+..  ..+++++.+|++|.+.+.++++++|+|||||+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   84 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   84 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence            47999999999999999999998  8999999996531  111111  14789999999999999999999999999999


Q ss_pred             cCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc------------cccCCCccccccccCC
Q 028444           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG------------YIADENQVHEEKYFCT  140 (209)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~------------~~~~e~~~~~~~~~~~  140 (209)
                      ....  ...++...+++|+.++.++++++.+.+ . +|||+||..+|+....            .+.+|+.+.   .+.+
T Consensus        85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~---~~~~  159 (348)
T 1oc2_A           85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY---NPSS  159 (348)
T ss_dssp             CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC---CCCS
T ss_pred             ccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCC---CCCC
Confidence            6532  224677899999999999999999884 4 9999999999985421            334444332   2346


Q ss_pred             hHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcC---------CceEEEEEEeeeeecC
Q 028444          141 QYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQ---------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~i  209 (209)
                      .|+.+|..+|.+++.+. +.+++++++||+++|||+... ..++..++.....+         .....|+|++|+|+++
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  237 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV  237 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc-cchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHH
Confidence            89999999999998876 459999999999999998643 24555566555443         3445789999999763

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=4.9e-33  Score=223.31  Aligned_cols=195  Identities=24%  Similarity=0.268  Sum_probs=153.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~   77 (209)
                      |+||||||+||||++++++|+++|++|++++|+...... .....+++++.+|++|.+++.++++  ++|+|||||+...
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~  100 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYK  100 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence            789999999999999999999999999999996543221 1111478999999999999999998  9999999999754


Q ss_pred             C-CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCcc--ccCCCccccccccCChHHHHHHHHHHHHH
Q 028444           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY--IADENQVHEEKYFCTQYERSKAVADKIAL  154 (209)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~--~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (209)
                      . ...++.  +++|+.++.++++++.+. +.++||++||..+|+.....  +.+|+.     .+.+.|+.+|.++|.+++
T Consensus       101 ~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~E~~-----~~~~~Y~~sK~~~e~~~~  172 (330)
T 2pzm_A          101 DPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALCYGRPATVPIPIDSPT-----APFTSYGISKTAGEAFLM  172 (330)
T ss_dssp             CTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGGCSCSSSSBCTTCCC-----CCCSHHHHHHHHHHHHHH
T ss_pred             CccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCccCCCCcCCCC-----CCCChHHHHHHHHHHHHH
Confidence            3 222333  899999999999999987 47899999999999865432  444443     234679999999999987


Q ss_pred             HHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCc------eEEEEEEeeeee-c
Q 028444          155 QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHF------SLVFFHCQITCH-A  208 (209)
Q Consensus       155 ~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~-~  208 (209)
                      .+   +++++++||+++|||+..  ..++..++.....+..      ...++|++|+|+ +
T Consensus       173 ~~---~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a  228 (330)
T 2pzm_A          173 MS---DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIA  228 (330)
T ss_dssp             TC---SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHH
T ss_pred             Hc---CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHH
Confidence            76   889999999999999862  3455555555443321      467899999997 5

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-33  Score=227.56  Aligned_cols=206  Identities=25%  Similarity=0.318  Sum_probs=155.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-----CCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a   73 (209)
                      |+|||||||||||++++++|+++|++|++++|+..+.     ..+....+++++.+|++|.+.+.+++++  +|+|||||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            5899999999999999999999999999999853211     0111113588999999999999999987  99999999


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccc----------------cCCCccccc
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI----------------ADENQVHEE  135 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~----------------~~e~~~~~~  135 (209)
                      +....  ...++...+++|+.++.++++++.+.+..++||++||..+|+.....+                .+|+.+.  
T Consensus        82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~--  159 (347)
T 1orr_A           82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL--  159 (347)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC--
T ss_pred             cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC--
Confidence            96432  124677889999999999999999885324999999999998644322                1222111  


Q ss_pred             cccCChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhc--------------CCceEE
Q 028444          136 KYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFS--------------QHFSLV  198 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~--------------~~~~~~  198 (209)
                       .+.+.|+.+|.++|.+++.+++ .+++++++||+++|||+....  ...+..++.....              ++....
T Consensus       160 -~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  238 (347)
T 1orr_A          160 -DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD  238 (347)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEe
Confidence             2346799999999999998764 599999999999999975321  2244444443332              234456


Q ss_pred             EEEEeeeeecC
Q 028444          199 FFHCQITCHAI  209 (209)
Q Consensus       199 ~~~~~dva~~i  209 (209)
                      |+|++|+|+++
T Consensus       239 ~i~v~Dva~a~  249 (347)
T 1orr_A          239 VLHAEDMISLY  249 (347)
T ss_dssp             CEEHHHHHHHH
T ss_pred             eEEHHHHHHHH
Confidence            89999999763

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=3.8e-33  Score=222.75  Aligned_cols=208  Identities=25%  Similarity=0.345  Sum_probs=145.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCC------CCC-CCceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG------LPS-EGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~------~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |+|||||||||||++++++|+++|++|+++.| ++.....      +.. ..+++++.+|++|.+++.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            58999999999999999999999999999988 5432111      110 025788999999999999999999999999


Q ss_pred             CccCCCCCCCc-cchhhhHHHHHHHHHHHHHhcCCccEEEEEccceee-ccCC-ccccCCCccccc-----cccCC-hHH
Q 028444           73 AALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL-GSTD-GYIADENQVHEE-----KYFCT-QYE  143 (209)
Q Consensus        73 a~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~-~~~~-~~~~~e~~~~~~-----~~~~~-~Y~  143 (209)
                      |+.......++ .+++++|+.++.++++++.+..+.++|||+||..++ +... ..+.+|+.+.+.     ..+.. .|+
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            98643233343 458999999999999999987446899999998754 3211 223444432111     01112 699


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC-cchhHHHHHHHHhcCC------ceEEEEEEeeeeecC
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT-TGNLVAKLVRLLFSQH------FSLVFFHCQITCHAI  209 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~i  209 (209)
                      .+|.++|.++.++.+ .+++++++||+++|||+... ....+..+.. ...++      ....|+|++|+|+++
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~i~v~Dva~a~  234 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALV-LVLGKKEQIGVTRFHMVHVDDVARAH  234 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTH-HHHSCGGGCCEEEEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHH-HHhCCCccCcCCCcCEEEHHHHHHHH
Confidence            999999999988864 69999999999999997532 1222222211 12222      223699999999763

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.6e-33  Score=231.08  Aligned_cols=172  Identities=26%  Similarity=0.339  Sum_probs=140.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHH-hCCCeEEEEEcCCCCC---------CCC-------CC---CCc---eEEEEccCCCHH
Q 028444            1 MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDI---------SGL-------PS---EGA---LELVYGDVTDYR   57 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~-~~g~~V~~~~r~~~~~---------~~~-------~~---~~~---~~~~~~Dl~~~~   57 (209)
                      |+||||||+||||++++++|+ ++|++|++++|+....         ..+       ..   ..+   ++++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            899999999999999999999 9999999999875432         111       00   114   889999999999


Q ss_pred             HHHHHhc--C-cCEEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC-------cc
Q 028444           58 SLVDACF--G-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-------GY  125 (209)
Q Consensus        58 ~~~~~~~--~-~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~-------~~  125 (209)
                      .+.++++  + +|+|||||+....  ...++..++++|+.++.++++++++. +.++||++||..+|+...       ..
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHHHhCCCCccccccccc
Confidence            9999887  6 9999999997532  23467789999999999999999887 578999999999998654       34


Q ss_pred             ccCCCccccccccCChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCC
Q 028444          126 IADENQVHEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~  176 (209)
                      +.+|+.+.   .+.+.|+.+|.++|.+++.+++ .+++++++||+++|||+.
T Consensus       162 ~~~E~~~~---~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          162 PIDINAKK---SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (397)
T ss_dssp             CBCTTSCC---BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             CcCccCCC---CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence            45555432   2347899999999999998864 499999999999999964

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=4.1e-33  Score=224.17  Aligned_cols=208  Identities=26%  Similarity=0.378  Sum_probs=151.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC------CCCC-CCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPS-EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~------~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+||||||+||||++++++|+++|++|+++.|+.....      .+.. ..+++++++|++|.+++.++++++|+|||+|
T Consensus         6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A   85 (337)
T 2c29_D            6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVA   85 (337)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEECC
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEec
Confidence            47999999999999999999999999999999765321      1111 1258899999999999999999999999999


Q ss_pred             ccCCCCCCCcc-chhhhHHHHHHHHHHHHHhcCCccEEEEEcccee-eccCC-ccccCCCcccccc------ccCChHHH
Q 028444           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA-LGSTD-GYIADENQVHEEK------YFCTQYER  144 (209)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~-~~~~~-~~~~~e~~~~~~~------~~~~~Y~~  144 (209)
                      +.......++. +.+++|+.++.++++++.+.+..++|||+||..+ |+... ..+.+|+.+.+..      .+.+.|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (337)
T 2c29_D           86 TPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFV  165 (337)
T ss_dssp             CCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHH
T ss_pred             cccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHH
Confidence            96533333433 5899999999999999998744689999999874 44321 2334444322211      12346999


Q ss_pred             HHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCc-chhHHHHHHHHhcCC-------ceEEEEEEeeeeecC
Q 028444          145 SKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQH-------FSLVFFHCQITCHAI  209 (209)
Q Consensus       145 sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~i  209 (209)
                      +|.++|.+++++. +.+++++++||+++|||+.... ...+...+. ...+.       ....|+|++|+|+++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~i~v~Dva~a~  238 (337)
T 2c29_D          166 SKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALS-PITGNEAHYSIIRQGQFVHLDDLCNAH  238 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTH-HHHTCGGGHHHHTEEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHH-HHcCCCccccccCCCCEEEHHHHHHHH
Confidence            9999999998876 4699999999999999975321 122221111 11121       234599999999763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=7.8e-33  Score=227.42  Aligned_cols=208  Identities=19%  Similarity=0.201  Sum_probs=156.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC----------CCCCC------------CCCceEEEEccCCCHHH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----------ISGLP------------SEGALELVYGDVTDYRS   58 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~----------~~~~~------------~~~~~~~~~~Dl~~~~~   58 (209)
                      |+||||||+||||++++++|+++|++|++++|....          +....            ...+++++.+|++|.+.
T Consensus        12 ~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~   91 (404)
T 1i24_A           12 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   91 (404)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHH
Confidence            589999999999999999999999999999875321          00000            01368899999999999


Q ss_pred             HHHHhcC--cCEEEEcCccCCC--CCCCc---cchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCc
Q 028444           59 LVDACFG--CHVIFHTAALVEP--WLPDP---SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        59 ~~~~~~~--~d~vi~~a~~~~~--~~~~~---~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                      +.+++++  +|+||||||....  ...++   ..++++|+.++.++++++++.+..++||++||..+|+.... +.+|+.
T Consensus        92 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~-~~~E~~  170 (404)
T 1i24_A           92 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGY  170 (404)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSE
T ss_pred             HHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCC-CCCccc
Confidence            9999987  9999999996432  12233   24789999999999999998742259999999999986542 333431


Q ss_pred             c-----------ccccccCChHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCc----------------chhH
Q 028444          132 V-----------HEEKYFCTQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT----------------GNLV  183 (209)
Q Consensus       132 ~-----------~~~~~~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~----------------~~~~  183 (209)
                      +           ..+..+.+.|+.+|.++|.+++.++ +.+++++++||+++|||+....                ...+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  250 (404)
T 1i24_A          171 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  250 (404)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             cccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHH
Confidence            1           0122345789999999999998876 4599999999999999976320                2456


Q ss_pred             HHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          184 AKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       184 ~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ..++.....++         ....|+|++|+|+++
T Consensus       251 ~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~  285 (404)
T 1i24_A          251 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV  285 (404)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             HHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHH
Confidence            66666655443         446799999999863

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.3e-32  Score=221.12  Aligned_cols=194  Identities=20%  Similarity=0.213  Sum_probs=152.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~~~~   77 (209)
                      |+|+|||||||||++++++|+++|++|++++|+..... .+....+++++.+|++|.+.+.+++++  +|+|||||+...
T Consensus        22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~  101 (333)
T 2q1w_A           22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYK  101 (333)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECceecC
Confidence            68999999999999999999999999999999754321 122114789999999999999999987  999999999754


Q ss_pred             C-CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec----cCCccccCCCccccccccC-ChHHHHHHHHHH
Q 028444           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG----STDGYIADENQVHEEKYFC-TQYERSKAVADK  151 (209)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~----~~~~~~~~e~~~~~~~~~~-~~Y~~sK~~~e~  151 (209)
                      . ...++.  +++|+.++.++++++.+. +.++||++||..+|+    .... +.+|+.     .+. +.|+.+|.++|.
T Consensus       102 ~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-----~p~~~~Y~~sK~~~E~  172 (333)
T 2q1w_A          102 DPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALCYGVKPIQQPV-RLDHPR-----NPANSSYAISKSANED  172 (333)
T ss_dssp             CTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-----CCTTCHHHHHHHHHHH
T ss_pred             CCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCcccCCC-CcCCCC-----CCCCCchHHHHHHHHH
Confidence            3 222333  899999999999999987 478999999999997    4433 444443     233 679999999999


Q ss_pred             HHHH-HhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC------ceEEEEEEeeeeecC
Q 028444          152 IALQ-AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH------FSLVFFHCQITCHAI  209 (209)
Q Consensus       152 ~~~~-~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~i  209 (209)
                      +++. +.    +++++||+++|||+..  ..++..++.....+.      ....++|++|+|+++
T Consensus       173 ~~~~s~~----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai  231 (333)
T 2q1w_A          173 YLEYSGL----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARAT  231 (333)
T ss_dssp             HHHHHTC----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHH
T ss_pred             HHHhhhC----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHH
Confidence            9887 65    7999999999999832  345666666655443      345689999998763

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=7.9e-33  Score=222.50  Aligned_cols=205  Identities=20%  Similarity=0.275  Sum_probs=154.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |+||||||+||||++++++|+++|++|++++|..........      ..++.++.+|++|.+++.++++  ++|+||||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            899999999999999999999999999999875432111000      1257899999999999988886  59999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      ||....  ...++.+.+++|+.++.++++++++. +.++||++||..+|+.....+.+|+.+..  ++.+.|+.+|.++|
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~~--~~~~~Y~~sK~~~e  157 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNPKIPYVESFPTG--TPQSPYGKSKLMVE  157 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSCCC--CCSSHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCCCCCcCcccCCC--CCCChHHHHHHHHH
Confidence            996422  22456678999999999999999887 46899999999999865544555544321  12467999999999


Q ss_pred             HHHHHHhh-c-CCCEEEEecCceecCCCC------C---cchhHHHHHHHHh----------------cCCceEEEEEEe
Q 028444          151 KIALQAAS-E-GLPIVPVYPGVIYGPGKL------T---TGNLVAKLVRLLF----------------SQHFSLVFFHCQ  203 (209)
Q Consensus       151 ~~~~~~~~-~-~~~~~~~rp~~v~g~~~~------~---~~~~~~~~~~~~~----------------~~~~~~~~~~~~  203 (209)
                      .+++.+++ . +++++++||+++|||+..      .   ...++..+.....                .|.....|+|++
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~  237 (338)
T 1udb_A          158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM  237 (338)
T ss_dssp             HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred             HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence            99998864 3 799999999999998431      0   1234454444332                123455799999


Q ss_pred             eeeec
Q 028444          204 ITCHA  208 (209)
Q Consensus       204 dva~~  208 (209)
                      |+|++
T Consensus       238 Dva~a  242 (338)
T 1udb_A          238 DLADG  242 (338)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99976

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=2.3e-33  Score=212.91  Aligned_cols=179  Identities=18%  Similarity=0.171  Sum_probs=143.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC-HHHHHHHhcCcCEEEEcCccCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAALVEPW   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~vi~~a~~~~~~   79 (209)
                      |+|+||||||+||++++++|+++|++|++++|+..+....   .+++++++|++| .+++.++++++|+|||||+...  
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~--   75 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG--   75 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT--
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC--
Confidence            8999999999999999999999999999999987765443   479999999999 9999999999999999999643  


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                          .+.+++|+.++.++++++++. +.++||++||..++.+.   +..|    .+..+.+.|+.+|.++|++++  .+.
T Consensus        76 ----~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~---~~~e----~~~~~~~~Y~~sK~~~e~~~~--~~~  141 (219)
T 3dqp_A           76 ----KSLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPE---KWIG----AGFDALKDYYIAKHFADLYLT--KET  141 (219)
T ss_dssp             ----SSCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGG---GCCS----HHHHHTHHHHHHHHHHHHHHH--HSC
T ss_pred             ----CCcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCC---cccc----cccccccHHHHHHHHHHHHHH--hcc
Confidence                247889999999999999987 57899999998776532   2222    112234679999999999886  456


Q ss_pred             CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +++++++||+++||+.......          .+.....+++++|+|++
T Consensus       142 ~i~~~ilrp~~v~g~~~~~~~~----------~~~~~~~~i~~~Dva~~  180 (219)
T 3dqp_A          142 NLDYTIIQPGALTEEEATGLID----------INDEVSASNTIGDVADT  180 (219)
T ss_dssp             CCEEEEEEECSEECSCCCSEEE----------ESSSCCCCEEHHHHHHH
T ss_pred             CCcEEEEeCceEecCCCCCccc----------cCCCcCCcccHHHHHHH
Confidence            8999999999999986532211          12445566667776654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.2e-32  Score=223.05  Aligned_cols=200  Identities=18%  Similarity=0.181  Sum_probs=158.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCC--CCCCCCCceEEEEccCCCHHHHHHHhc-----CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~vi~~   72 (209)
                      |+|+|||||||||++++++|+++| ++|++++|+....  ..+.   ++. +.+|++|.+.+..+++     ++|+|||+
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT---TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc---Cce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            579999999999999999999999 9999999876432  1121   233 6789999999998887     59999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHH
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  152 (209)
                      |+....+..++.+.+++|+.++.++++++.+.. . +||++||..+|+.....+.+|+.+..   +.+.|+.+|.++|.+
T Consensus       123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEK---PLNVFGYSKFLFDEY  197 (357)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGGGCC---CSSHHHHHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcCCCC---CCChhHHHHHHHHHH
Confidence            997655556788899999999999999999874 6 99999999999876554555654332   347899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC---------c-eEEEEEEeeeeecC
Q 028444          153 ALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH---------F-SLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~~-~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~---------~-~~~~~~~~dva~~i  209 (209)
                      ++.+.+ .+++++++||+++|||+....   ..++..++.....+.         . ...|+|++|+|+++
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai  268 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN  268 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHH
Confidence            998864 589999999999999976421   245666666655443         3 55789999999763

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=2e-33  Score=221.26  Aligned_cols=188  Identities=23%  Similarity=0.252  Sum_probs=149.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC-cCEEEEcCccCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-CHVIFHTAALVEPW   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~vi~~a~~~~~~   79 (209)
                      |+|+||| +||||++++++|+++|++|++++|+..+..     .+++++.+|++|.+.+.+++++ +|+|||+|+...  
T Consensus         4 ~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~--   75 (286)
T 3gpi_A            4 SKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP-----AGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE--   75 (286)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC-----TTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH--
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC--
Confidence            5899999 699999999999999999999999876532     3789999999999999998887 999999999632  


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                       .++...+++|+.++.++++++++. +.++|||+||..+|+...+.+.+|+.+..   +.+.|+.+|.++|.+ +.+   
T Consensus        76 -~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~-~~~---  146 (286)
T 3gpi_A           76 -YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQEVEEWLDEDTPPI---AKDFSGKRMLEAEAL-LAA---  146 (286)
T ss_dssp             -HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCCCSSEECTTSCCC---CCSHHHHHHHHHHHH-GGG---
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCCCCCCCCCCCCCC---CCChhhHHHHHHHHH-Hhc---
Confidence             455678899999999999999976 57899999999999987666666655433   347899999999998 553   


Q ss_pred             CCCEEEEecCceecCCCCCcchhHHHHHHH--HhcCCceEEEEEEeeeeecC
Q 028444          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRL--LFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dva~~i  209 (209)
                       ++++++||+++|||+..   .++..+...  ...+.....|+|++|+|+++
T Consensus       147 -~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  194 (286)
T 3gpi_A          147 -YSSTILRFSGIYGPGRL---RMIRQAQTPEQWPARNAWTNRIHRDDGAAFI  194 (286)
T ss_dssp             -SSEEEEEECEEEBTTBC---HHHHHTTCGGGSCSSBCEECEEEHHHHHHHH
T ss_pred             -CCeEEEecccccCCCch---hHHHHHHhcccCCCcCceeEEEEHHHHHHHH
Confidence             89999999999999753   333333220  12355667899999999863

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=3.8e-33  Score=221.84  Aligned_cols=202  Identities=19%  Similarity=0.169  Sum_probs=155.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~   76 (209)
                      |+|+|||||||||++++++|+++  |++|++++|+..+.. +.  .+++++.+|++|.+++.++++  ++|+|||+|+..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   79 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--NSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL   79 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--HSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--CCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence            58999999999999999999998  899999999765421 11  257899999999999999998  899999999964


Q ss_pred             CC-CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc-cccCCCccccccccCChHHHHHHHHHHHHH
Q 028444           77 EP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADKIAL  154 (209)
Q Consensus        77 ~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~  154 (209)
                      .. ...++.+.+++|+.++.++++++++. +.++|||+||..+|+.... .+.+|+.+.   .+.+.|+.+|.++|.+++
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~---~~~~~Y~~sK~~~e~~~~  155 (312)
T 2yy7_A           80 SATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTPKENTPQYTIM---EPSTVYGISKQAGERWCE  155 (312)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSCSSSBCSSCBC---CCCSHHHHHHHHHHHHHH
T ss_pred             CCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCCCCCccccCcC---CCCchhHHHHHHHHHHHH
Confidence            32 22466788999999999999999987 4789999999999986432 334444322   234789999999999998


Q ss_pred             HHh-hcCCCEEEEecCceecCCCCCc---ch-hHHHHHHHHh--------cCCceEEEEEEeeeeecC
Q 028444          155 QAA-SEGLPIVPVYPGVIYGPGKLTT---GN-LVAKLVRLLF--------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       155 ~~~-~~~~~~~~~rp~~v~g~~~~~~---~~-~~~~~~~~~~--------~~~~~~~~~~~~dva~~i  209 (209)
                      .+. +.+++++++||+++|||+....   .. ....+...+.        .++....|+|++|+|+++
T Consensus       156 ~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  223 (312)
T 2yy7_A          156 YYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT  223 (312)
T ss_dssp             HHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHH
T ss_pred             HHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHH
Confidence            876 4599999999999999753211   12 3333333332        234556899999999763

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=6e-33  Score=216.75  Aligned_cols=165  Identities=21%  Similarity=0.192  Sum_probs=139.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~   81 (209)
                      +|+||||+|+||++++++|+++|++|++++|+..+..    ..+++++.+|++|.+++.++++++|+||||||..  ...
T Consensus         5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--~~~   78 (267)
T 3rft_A            5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGIS--VEK   78 (267)
T ss_dssp             EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC--SCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--CcC
Confidence            6999999999999999999999999999999876543    2379999999999999999999999999999973  346


Q ss_pred             CccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC-ccccCCCccccccccCChHHHHHHHHHHHHHHHh-hc
Q 028444           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (209)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~  159 (209)
                      ++++.+++|+.++.++++++++. +.++||++||..+|+... ..+.+|+.+.+   +.+.|+.+|.+.|.+.+.++ +.
T Consensus        79 ~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~---~~~~Y~~sK~~~e~~~~~~a~~~  154 (267)
T 3rft_A           79 PFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLGPDVPAR---PDGLYGVSKCFGENLARMYFDKF  154 (267)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBTTSCBCTTSCCC---CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCCCCCCCCCCCCC---CCChHHHHHHHHHHHHHHHHHHh
Confidence            67889999999999999999887 478999999999997432 23344443322   34779999999999998876 56


Q ss_pred             CCCEEEEecCceecCCC
Q 028444          160 GLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~  176 (209)
                      +++++++||+.+||+..
T Consensus       155 g~~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          155 GQETALVRIGSCTPEPN  171 (267)
T ss_dssp             CCCEEEEEECBCSSSCC
T ss_pred             CCeEEEEEeecccCCCC
Confidence            99999999999999743

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.6e-32  Score=219.22  Aligned_cols=193  Identities=19%  Similarity=0.220  Sum_probs=151.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      |+|+||||+||||++++++|+++|++|+++.|+.               .+|++|.+++.++++  ++|+|||+|+....
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   68 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG   68 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence            5899999999999999999999999999987652               259999999999998  89999999997532


Q ss_pred             ---CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcccc-cccc-CChHHHHHHHHHHHH
Q 028444           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYF-CTQYERSKAVADKIA  153 (209)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~-~~~~-~~~Y~~sK~~~e~~~  153 (209)
                         ...++.+.+++|+.++.++++++++. +.++|||+||..+|+.....+.+|+.+.. +..+ .+.|+.+|..+|.++
T Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A           69 IVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             cchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence               23466788999999999999999987 47899999999999876555555554211 1112 247999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCc---chhHHHHHHHHhc--------------CCceEEEEEEeeeeecC
Q 028444          154 LQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFS--------------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~~-~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~--------------~~~~~~~~~~~dva~~i  209 (209)
                      +.+.+ .+++++++||+++|||+....   ..++..++.....              +.....|+|++|+|+++
T Consensus       148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~  221 (321)
T 1e6u_A          148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAAS  221 (321)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHH
Confidence            88764 589999999999999976421   2455555554431              33445789999999763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=7.7e-33  Score=218.95  Aligned_cols=185  Identities=17%  Similarity=0.173  Sum_probs=150.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++++++|+ +|++|++++|+..            ++.+|++|.+.+.+++++  +|+|||+|+....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            899999999999999999999 8999999998752            245799999999999886  9999999997542


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        ...++.+.+++|+.++.++++++++.+ . +|||+||..+|+.....+.+|+.+..   +.+.|+.+|..+|.+++.+
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~~~~~  142 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATS---PLNVYGKTKLAGEKALQDN  142 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCC---CSSHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCCCCC---CccHHHHHHHHHHHHHHHh
Confidence              346778899999999999999999874 4 89999999999876655556654332   3468999999999999886


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC-------ceEEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH-------FSLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~i  209 (209)
                      ..   +++++||+++|||+..   .++..++.....+.       ....|+|++|+|+++
T Consensus       143 ~~---~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  196 (299)
T 1n2s_A          143 CP---KHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCT  196 (299)
T ss_dssp             CS---SEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             CC---CeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHH
Confidence            53   8999999999999753   45666666555443       335678999998763

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=8.7e-33  Score=219.65  Aligned_cols=196  Identities=21%  Similarity=0.196  Sum_probs=151.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (209)
                      |+|||||||||||++++++|+++|+      +....      ..+++++++|++|.+.+.+++++  +|+|||+|+....
T Consensus         7 ~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~   74 (319)
T 4b8w_A            7 MRILVTGGSGLVGKAIQKVVADGAG------LPGED------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGG   74 (319)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhcCC------ccccc------ccccCceecccCCHHHHHHHHhhcCCCEEEECceeccc
Confidence            6899999999999999999999998      11110      01344557899999999999986  9999999997542


Q ss_pred             ---CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcccc-ccccCC-hHHHHHHHHHHHH
Q 028444           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYFCT-QYERSKAVADKIA  153 (209)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~-~~~~~~-~Y~~sK~~~e~~~  153 (209)
                         ...++.+.+++|+.++.++++++++. ++++|||+||..+|+.....+.+|+.+.. +..+.+ +|+.+|.++|.++
T Consensus        75 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  153 (319)
T 4b8w_A           75 LFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQN  153 (319)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHH
Confidence               34677789999999999999999988 47899999999999987766666665321 122223 5999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCC---cchhHHHHHHH----HhcCC---------ceEEEEEEeeeeecC
Q 028444          154 LQAAS-EGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRL----LFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~~-~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~----~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +.+.+ .+++++++||+++|||+...   ...+++.++..    ...+.         ....|+|++|+|+++
T Consensus       154 ~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  226 (319)
T 4b8w_A          154 RAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLF  226 (319)
T ss_dssp             HHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHH
T ss_pred             HHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHH
Confidence            88764 59999999999999998642   12345555554    44333         345689999999863

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-32  Score=218.92  Aligned_cols=201  Identities=18%  Similarity=0.184  Sum_probs=155.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC-----cCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-----CHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~d~vi~~a~~   75 (209)
                      +|+|||||||||++++++|+++| ++|++++|+..... .....++. +.+|++|.+.+..++++     +|+|||+|+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhhcCcce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            58999999999999999999999 99999998754321 00001233 67899999999998875     9999999998


Q ss_pred             CCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      ...+..++..++++|+.++.++++++++.+ . +||++||..+|+.....+.+|+.+.   .+.+.|+.+|..+|.+++.
T Consensus        79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~---~p~~~Y~~sK~~~e~~~~~  153 (310)
T 1eq2_A           79 SSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYE---KPLNVYGYSKFLFDEYVRQ  153 (310)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGC---CCSSHHHHHHHHHHHHHHH
T ss_pred             ccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCCCC---CCCChhHHHHHHHHHHHHH
Confidence            665556788899999999999999999884 6 9999999999987655455555432   2347899999999999998


Q ss_pred             Hh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhc---------CCc-eEEEEEEeeeeecC
Q 028444          156 AA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFS---------QHF-SLVFFHCQITCHAI  209 (209)
Q Consensus       156 ~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~---------~~~-~~~~~~~~dva~~i  209 (209)
                      +. +.+++++++||+++|||+....   ..++..++.....         ++. ...|+|++|+|+++
T Consensus       154 ~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~  221 (310)
T 1eq2_A          154 ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN  221 (310)
T ss_dssp             HGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHH
T ss_pred             HHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHH
Confidence            86 4589999999999999976311   2445555544333         334 56789999999763

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.98  E-value=1.8e-32  Score=215.71  Aligned_cols=182  Identities=19%  Similarity=0.202  Sum_probs=150.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++++++|+++|++|++++|.                ++|++|.+.+.++++  ++|+|||+|+....
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            589999999999999999999999999999982                259999999999998  69999999997543


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        ...++...+++|+.++.++++++++.+ . +|||+||..+|+.....+.+|+.+..   +.+.|+.+|..+|.+++.+
T Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~~~~~  144 (287)
T 3sc6_A           70 DQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGYDEFHNPA---PINIYGASKYAGEQFVKEL  144 (287)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCBCTTSCCC---CCSHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHh
Confidence              336788899999999999999999884 4 79999999999877666666665433   3478999999999999886


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC-------ceEEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH-------FSLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~i  209 (209)
                      ..   +++++||+++|||+.   ..++..++.....+.       ....++|++|+|+++
T Consensus       145 ~~---~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  198 (287)
T 3sc6_A          145 HN---KYFIVRTSWLYGKYG---NNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMI  198 (287)
T ss_dssp             CS---SEEEEEECSEECSSS---CCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             CC---CcEEEeeeeecCCCC---CcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHH
Confidence            54   689999999999975   356677776665443       345679999999763

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.98  E-value=3.1e-32  Score=217.14  Aligned_cols=193  Identities=22%  Similarity=0.296  Sum_probs=150.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC----CCCCCC---CCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----DISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~----~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|||||||||||++++++|+++|++|++++|+..    ....+.   ...+++++.+|++          ++|+|||+|
T Consensus         8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~~a   77 (321)
T 3vps_A            8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYHLA   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEECC
Confidence            47999999999999999999999999999999765    221111   1134555666654          889999999


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      +....  ...++...++ |+.++.++++++++.+ +++|||+||..+|+.....+.+|+.+..   +.+.|+.+|..+|.
T Consensus        78 ~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~  152 (321)
T 3vps_A           78 SHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLS---PRSPYAASKVGLEM  152 (321)
T ss_dssp             CCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCC---CCSHHHHHHHHHHH
T ss_pred             ccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCC---CCChhHHHHHHHHH
Confidence            97532  3456667788 9999999999999984 7899999999999987666666665433   34789999999999


Q ss_pred             HHHHHhh-cCC-CEEEEecCceecCCCCCcchhHHHHHHHHhc---------CCceEEEEEEeeeeecC
Q 028444          152 IALQAAS-EGL-PIVPVYPGVIYGPGKLTTGNLVAKLVRLLFS---------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       152 ~~~~~~~-~~~-~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~i  209 (209)
                      +++.+.+ .++ +++++||+++|||+... ..++..++.....         +.....|+|++|+|+++
T Consensus       153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~  220 (321)
T 3vps_A          153 VAGAHQRASVAPEVGIVRFFNVYGPGERP-DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKL  220 (321)
T ss_dssp             HHHHHHHSSSSCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHcCCCceEEEEeccccCcCCCC-CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHH
Confidence            9999874 589 99999999999998754 3456666655543         34556789999999763

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.98  E-value=6.3e-32  Score=217.58  Aligned_cols=204  Identities=19%  Similarity=0.214  Sum_probs=159.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-------CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~   72 (209)
                      |+|+||||+||||++++++|+++|       ++|++++|+..+.... ...+++++.+|++|.+.+.+++ .++|+|||+
T Consensus        15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   93 (342)
T 2hrz_A           15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG-FSGAVDARAADLSAPGEAEKLVEARPDVIFHL   93 (342)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT-CCSEEEEEECCTTSTTHHHHHHHTCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc-cCCceeEEEcCCCCHHHHHHHHhcCCCEEEEC
Confidence            589999999999999999999999       8999999986543221 2247899999999999999988 489999999


Q ss_pred             CccCCC-CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           73 AALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        73 a~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      |+.... ...++.+.+++|+.++.++++++++..    ..++||++||..+|+.....+.+|+.+..   +.+.|+.+|.
T Consensus        94 A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~---~~~~Y~~sK~  170 (342)
T 2hrz_A           94 AAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTT---PLTSYGTQKA  170 (342)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCC---CSSHHHHHHH
T ss_pred             CccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCC---CcchHHHHHH
Confidence            996432 234677889999999999999998763    25799999999999875444555554332   3478999999


Q ss_pred             HHHHHHHHHhhc-CCCEEEEecCceec-CCCCC--cchhHHHHHHHHhcCCc---------eEEEEEEeeeeec
Q 028444          148 VADKIALQAASE-GLPIVPVYPGVIYG-PGKLT--TGNLVAKLVRLLFSQHF---------SLVFFHCQITCHA  208 (209)
Q Consensus       148 ~~e~~~~~~~~~-~~~~~~~rp~~v~g-~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~  208 (209)
                      ++|.+++.+.+. +++.+++|++.+|| |+...  ...++..++.....+..         ...++|++|+|++
T Consensus       171 ~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~  244 (342)
T 2hrz_A          171 ICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGF  244 (342)
T ss_dssp             HHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHH
Confidence            999999988754 78999999999998 76521  13456666666655542         3457899999875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.98  E-value=9.9e-32  Score=216.23  Aligned_cols=205  Identities=14%  Similarity=0.102  Sum_probs=158.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-----CCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----LPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a   73 (209)
                      |+|+||||+||||++++++|+++|++|++++|+..+...     .....+++++.+|++|.+++.+++++  +|+|||||
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   83 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLA   83 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECC
Confidence            589999999999999999999999999999998654321     11113689999999999999998875  69999999


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      +....  ...++...+++|+.++.++++++.+. +. ++||++||..+|+.....+.+|..+..   +.+.|+.+|.++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~---~~~~Y~~sK~~~e  159 (345)
T 2z1m_A           84 AQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEKTPFY---PRSPYAVAKLFGH  159 (345)
T ss_dssp             CCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC---CCSHHHHHHHHHH
T ss_pred             CCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCccCCCC---CCChhHHHHHHHH
Confidence            97532  24567889999999999999999976 44 799999999999876655555554332   3467999999999


Q ss_pred             HHHHHHhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcCC----------ceEEEEEEeeeeecC
Q 028444          151 KIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQH----------FSLVFFHCQITCHAI  209 (209)
Q Consensus       151 ~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~~dva~~i  209 (209)
                      .+++.+++ .++++.++|++.+|||+....  ...+..++.....+.          ....|+|++|+|+++
T Consensus       160 ~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~  231 (345)
T 2z1m_A          160 WITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAM  231 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHH
Confidence            99998864 489999999999999986322  122333343333332          223489999999763

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.98  E-value=9.2e-32  Score=219.27  Aligned_cols=204  Identities=22%  Similarity=0.181  Sum_probs=156.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-----CCCCC------CCCceEEEEccCCCHHHHHHHhcC--cCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLP------SEGALELVYGDVTDYRSLVDACFG--CHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   68 (209)
                      +||||||+||||++++++|+++|++|++++|+...     +..+.      ...+++++.+|++|.+++.+++++  +|+
T Consensus        26 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  105 (375)
T 1t2a_A           26 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE  105 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCE
Confidence            79999999999999999999999999999997643     11111      123688999999999999998875  699


Q ss_pred             EEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCc---cEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV---EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||||+....  ...++...+++|+.++.++++++.+.+ .   ++||++||..+|+.....+.+|+.+..   +.+.|+
T Consensus       106 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~---~~~~Y~  181 (375)
T 1t2a_A          106 IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFY---PRSPYG  181 (375)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCC---CCSHHH
T ss_pred             EEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCCCCccCCCC---CCChhH
Confidence            9999996432  134667889999999999999999874 4   799999999999876555556654332   346799


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcC----------CceEEEEEEeeeeecC
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQ----------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~dva~~i  209 (209)
                      .+|.++|.+++.+++ .+++++++||+.+|||+....  ...+..++.....+          +....|+|++|+|+++
T Consensus       182 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~  260 (375)
T 1t2a_A          182 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM  260 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHH
Confidence            999999999998864 589999999999999975321  12234444443333          2335689999999763

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.98  E-value=2.4e-31  Score=216.31  Aligned_cols=205  Identities=17%  Similarity=0.140  Sum_probs=155.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-----CCCCCC-----CCceEEEEccCCCHHHHHHHhcC--cCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPS-----EGALELVYGDVTDYRSLVDACFG--CHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~--~d~   68 (209)
                      |+|+||||+||||++++++|+++|++|++++|+..+     +..+..     ..+++++.+|++|.+++.+++++  +|+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCE
Confidence            589999999999999999999999999999997543     111111     13688999999999999998875  799


Q ss_pred             EEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCc---cEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV---EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||||+....  ..+++...+++|+.++.++++++.+.+ .   ++||++||..+|+.....+.+|+.+..   +.+.|+
T Consensus        82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~---~~~~Y~  157 (372)
T 1db3_A           82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFY---PRSPYA  157 (372)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCC---CCSHHH
T ss_pred             EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCCCCccCCCC---CCChHH
Confidence            9999997532  345677789999999999999999874 4   799999999999876554555554332   346899


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcCC----------ceEEEEEEeeeeecC
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQH----------FSLVFFHCQITCHAI  209 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~~~dva~~i  209 (209)
                      .+|.++|.+++.+++ .+++++++||+.+|||+....  ...+..++.....+.          ....|+|++|+|+++
T Consensus       158 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~  236 (372)
T 1db3_A          158 VAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ  236 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHH
Confidence            999999999998864 589999999999999975321  123444554444443          334689999999763

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.98  E-value=1.1e-31  Score=225.42  Aligned_cols=206  Identities=23%  Similarity=0.277  Sum_probs=160.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC---CCeEEEEEcCCCCCC-------CCCC-------------CCceEEEEccCC---
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ---GHSVRALVRRTSDIS-------GLPS-------------EGALELVYGDVT---   54 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~---g~~V~~~~r~~~~~~-------~~~~-------------~~~~~~~~~Dl~---   54 (209)
                      |+|||||||||||++++++|+++   |++|++++|+.....       .+..             ..+++++.+|++   
T Consensus        74 ~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~  153 (478)
T 4dqv_A           74 RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPD  153 (478)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGG
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcc
Confidence            68999999999999999999999   899999999865310       0000             137999999998   


Q ss_pred             ---CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCc
Q 028444           55 ---DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        55 ---~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                         |.+.+.++++++|+|||||+....  .++.+.+++|+.++.++++++.+. +.++|||+||..+|+.....+.+|+.
T Consensus       154 ~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~~~~~~~~E~~  230 (478)
T 4dqv_A          154 LGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSAFTEDA  230 (478)
T ss_dssp             GGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred             cCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCccCCCCcCCcc
Confidence               667889999999999999997654  667789999999999999999987 57899999999999875555555544


Q ss_pred             cccccc--------cCChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCC----CcchhHHHHHHHHhc-C----
Q 028444          132 VHEEKY--------FCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL----TTGNLVAKLVRLLFS-Q----  193 (209)
Q Consensus       132 ~~~~~~--------~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~----~~~~~~~~~~~~~~~-~----  193 (209)
                      ...+..        ..+.|+.+|.++|.+++.+.+ .+++++++|||++||++..    ....++..++..... |    
T Consensus       231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~  310 (478)
T 4dqv_A          231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR  310 (478)
T ss_dssp             CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred             cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence            322111        124599999999999999875 6999999999999998541    223566666554332 2    


Q ss_pred             ------------CceEEEEEEeeeeecC
Q 028444          194 ------------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       194 ------------~~~~~~~~~~dva~~i  209 (209)
                                  +..+.++|++|+|+++
T Consensus       311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai  338 (478)
T 4dqv_A          311 SFYEPDSEGNRQRAHFDGLPVTFVAEAI  338 (478)
T ss_dssp             CSBCCCTTSCCCCCCCCEEEHHHHHHHH
T ss_pred             cccccccccccccceeeeeeHHHHHHHH
Confidence                        3456889999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.98  E-value=2.7e-31  Score=214.10  Aligned_cols=202  Identities=19%  Similarity=0.279  Sum_probs=154.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |+|||||||||||++++++|+++|++|++++|+.....    .+....+++++.+|+.+.     .+.++|+|||+|+..
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~A~~~  102 (343)
T 2b69_A           28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHLASPA  102 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEECCSCC
T ss_pred             CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEECcccc
Confidence            58999999999999999999999999999999653221    111124789999999875     357899999999965


Q ss_pred             CC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc--cccccCChHHHHHHHHHHH
Q 028444           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~~  152 (209)
                      ..  ...++...+++|+.++.++++++++.. . +||++||..+|+.....+.+|+.+.  .+..+.+.|+.+|.++|.+
T Consensus       103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  180 (343)
T 2b69_A          103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  180 (343)
T ss_dssp             SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHH
Confidence            32  245677889999999999999999874 4 9999999999987655555555321  1222346799999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCCc-chhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++.+. +.+++++++||+++|||+.... ..++..++.....+.         ....|+|++|+|+++
T Consensus       181 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~  248 (343)
T 2b69_A          181 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL  248 (343)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence            98876 4599999999999999975321 345566666554443         345789999999763

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.98  E-value=1.1e-31  Score=233.39  Aligned_cols=207  Identities=20%  Similarity=0.294  Sum_probs=162.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHH-HHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++++++|+++ |++|++++|+..+...+....+++++.+|++|.++ +.++++++|+|||||+....
T Consensus       316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~  395 (660)
T 1z7e_A          316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP  395 (660)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCT
T ss_pred             ceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceecCc
Confidence            47999999999999999999998 89999999987655433333579999999999765 77788899999999997543


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc----cccccCChHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~e~~  152 (209)
                        +..++.+.+++|+.++.++++++.+. + ++||++||..+|+.....+.+|+.+.    +...+.+.|+.+|.++|.+
T Consensus       396 ~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~  473 (660)
T 1z7e_A          396 IEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  473 (660)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHH
T ss_pred             cccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHH
Confidence              23466788999999999999999987 4 89999999999987655555555432    1123445799999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCC-------cchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLT-------TGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++.++ +.+++++++||+++|||+...       ...++..++.....+.         ....|+|++|+|+++
T Consensus       474 ~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai  547 (660)
T 1z7e_A          474 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_dssp             HHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence            98876 459999999999999997632       1345666666655443         345689999998763

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.98  E-value=1.8e-31  Score=212.76  Aligned_cols=198  Identities=21%  Similarity=0.227  Sum_probs=152.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~   77 (209)
                      +||||||+||||++++++|+++  |++|++++|+..+..      +++++.+|++|.+++.++++  ++|+|||+|+...
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            5899999999999999999998  899999998765422      46789999999999999987  8999999999642


Q ss_pred             C-CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC-ccccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      . ...++...+++|+.++.++++++++. +.++||++||..+|+... ..+.+|+.+.   .+.+.|+.+|.++|.+++.
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~---~p~~~Y~~sK~~~e~~~~~  150 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETPKNKVPSITIT---RPRTMFGVTKIAAELLGQY  150 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSCSSSBCSSSCC---CCCSHHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCCCCCccccccC---CCCchHHHHHHHHHHHHHH
Confidence            2 22456788999999999999999987 578999999999998643 2333443322   2347899999999999988


Q ss_pred             Hh-hcCCCEEEEecCceecCCCCC---cchhHHHHHHH-Hhc--------CCceEEEEEEeeeeecC
Q 028444          156 AA-SEGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRL-LFS--------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       156 ~~-~~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~-~~~--------~~~~~~~~~~~dva~~i  209 (209)
                      +. +.+++++++||+.+||+....   ....+...+.. ...        ++....|+|++|+|+++
T Consensus       151 ~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  217 (317)
T 3ajr_A          151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKAL  217 (317)
T ss_dssp             HHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHH
T ss_pred             HHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHH
Confidence            75 459999999999999975311   11223233332 222        34456899999998763

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=1.4e-31  Score=221.83  Aligned_cols=204  Identities=24%  Similarity=0.325  Sum_probs=152.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC---CC--------------CCCCceEEEEccCCCHHHHHHHh
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GL--------------PSEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~---~~--------------~~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      |+|||||||||||++++++|+++|++|++++|+.....   .+              ....++.++.+|++|.+.+. .+
T Consensus        70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~  148 (427)
T 4f6c_A           70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LP  148 (427)
T ss_dssp             EEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CS
T ss_pred             CEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-Cc
Confidence            37999999999999999999999999999999866110   00              00137999999999988887 77


Q ss_pred             cCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccC-----CccccCCCcccccccc
Q 028444           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF  138 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~-----~~~~~~e~~~~~~~~~  138 (209)
                      .++|+|||||+.... ..++...+++|+.++.++++++.+  +.++||++||..+ |..     ...+.+|+.+.....+
T Consensus       149 ~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~  224 (427)
T 4f6c_A          149 ENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  224 (427)
T ss_dssp             SCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCC
T ss_pred             CCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCccccccccccCCCC
Confidence            899999999997543 356788999999999999999998  4689999999988 432     2334455544333335


Q ss_pred             CChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCc------chhHHHHHHHHhcC--------CceEEEEEEee
Q 028444          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLVRLLFSQ--------HFSLVFFHCQI  204 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~------~~~~~~~~~~~~~~--------~~~~~~~~~~d  204 (209)
                      .+.|+.+|.++|.+++.+.+.|++++++|||++|||.....      ..++..++.....+        +....|++++|
T Consensus       225 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  304 (427)
T 4f6c_A          225 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDT  304 (427)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHH
Confidence            68899999999999999887899999999999999976432      23466666665543        44556999999


Q ss_pred             eeecC
Q 028444          205 TCHAI  209 (209)
Q Consensus       205 va~~i  209 (209)
                      +|+++
T Consensus       305 vA~ai  309 (427)
T 4f6c_A          305 TARQI  309 (427)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99863

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.97  E-value=2.3e-31  Score=217.31  Aligned_cols=203  Identities=21%  Similarity=0.161  Sum_probs=156.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-----CCCCCCC-----C-ceEEEEccCCCHHHHHHHhcC--cCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSE-----G-ALELVYGDVTDYRSLVDACFG--CHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~~~-----~-~~~~~~~Dl~~~~~~~~~~~~--~d~   68 (209)
                      +||||||+||||++++++|+++|++|++++|+..+     +..+...     . +++++.+|++|.+++.+++++  +|+
T Consensus        30 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  109 (381)
T 1n7h_A           30 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDE  109 (381)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             eEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCCE
Confidence            79999999999999999999999999999998654     2222111     1 688999999999999998875  699


Q ss_pred             EEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCcc-----EEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVE-----KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        69 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||||+....  ...++...+++|+.++.++++++.+.+ ++     +||++||..+|+.... +.+|+.+..   +.+.
T Consensus       110 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~---~~~~  184 (381)
T 1n7h_A          110 VYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFH---PRSP  184 (381)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCC---CCSH
T ss_pred             EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCC-CCCCCCCCC---CCCc
Confidence            9999996432  134677889999999999999998763 33     9999999999987655 555554332   3467


Q ss_pred             HHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcC----------CceEEEEEEeeeeec
Q 028444          142 YERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQ----------HFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~dva~~  208 (209)
                      |+.+|.++|.+++.+.+ .+++++++|++.+|||+....  ...+..++.....+          .....|+|++|+|++
T Consensus       185 Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a  264 (381)
T 1n7h_A          185 YAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEA  264 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHH
Confidence            99999999999998864 489999999999999976321  12233344433333          344578999999976


Q ss_pred             C
Q 028444          209 I  209 (209)
Q Consensus       209 i  209 (209)
                      +
T Consensus       265 ~  265 (381)
T 1n7h_A          265 M  265 (381)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.97  E-value=5e-32  Score=215.85  Aligned_cols=191  Identities=19%  Similarity=0.205  Sum_probs=123.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++++++|+++|++|++++|+..+     .  +  ++.+|++|.+++.+++++  +|+|||||+....
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~--~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   73 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----P--K--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP   73 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC-----
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----C--C--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence            589999999999999999999999999999986543     1  3  788999999999888875  8999999997533


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        ...++.+.+++|+.++.++++++.+.. . +|||+||..+|+. ...+.+|+.+..   +.+.|+.+|..+|.+++.+
T Consensus        74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~-~~~~~~E~~~~~---~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           74 DVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG-TNPPYREEDIPA---PLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             --------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS-SSCSBCTTSCCC---CCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC-CCCCCCCCCCCC---CcCHHHHHHHHHHHHHHHh
Confidence              346778899999999999999999874 3 9999999999987 334455554322   3478999999999998876


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHh-cCC-------ceEEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLF-SQH-------FSLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~dva~~i  209 (209)
                         +++++++||+.+|||.......++..++.... .+.       ....++|++|+|+++
T Consensus       148 ---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  205 (315)
T 2ydy_A          148 ---NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC  205 (315)
T ss_dssp             ---CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHH
T ss_pred             ---CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHH
Confidence               46789999999999976421133333444443 333       334679999998763

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.97  E-value=1e-31  Score=211.97  Aligned_cols=181  Identities=18%  Similarity=0.149  Sum_probs=146.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      |+|||||||||||++++++|+++|++|++++|+                .+|++|.+++.++++  ++|+|||||+....
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   76 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHTAV   76 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCccCCH
Confidence            589999999999999999999999999999885                259999999999988  79999999996432


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        ...++.+.+++|+.++.++++++++.+ . +||++||..+|+.....+.+|+.+..   +.+.|+.+|..+|.+++.+
T Consensus        77 ~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~---~~~~Y~~sK~~~E~~~~~~  151 (292)
T 1vl0_A           77 DKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFDEVN---PQSAYGKTKLEGENFVKAL  151 (292)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTSCCC---CCSHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCCCCC---CccHHHHHHHHHHHHHHhh
Confidence              235677889999999999999999874 5 99999999999876555556654332   3467999999999999886


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC-------ceEEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH-------FSLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~i  209 (209)
                      ..   +++++||+.+||| .   ..++..++.....+.       ....++|++|+|+++
T Consensus       152 ~~---~~~~lR~~~v~G~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  204 (292)
T 1vl0_A          152 NP---KYYIVRTAWLYGD-G---NNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV  204 (292)
T ss_dssp             CS---SEEEEEECSEESS-S---SCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred             CC---CeEEEeeeeeeCC-C---cChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHH
Confidence            43   6999999999999 3   245555555554443       335679999998763

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=5.9e-33  Score=211.02  Aligned_cols=163  Identities=13%  Similarity=0.130  Sum_probs=127.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |||+||||||+||++++++|+++|++|++++|+..+...+.. .+++++++|++|.+.  +++.++|+|||||+....  
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWG--   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTT--
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH--hhcccCCEEEECCccCCC--
Confidence            899999999999999999999999999999998655433222 379999999999887  788999999999997511  


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc---cccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG---YIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~---~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                         ....+.|+.++.++++++++. + ++||++||..++.....   .+.++...+   .+.+.|+.+|..+|.+.....
T Consensus        76 ---~~~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~sK~~~e~~~~~~~  147 (224)
T 3h2s_A           76 ---SGRGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILDFPESA---ASQPWYDGALYQYYEYQFLQM  147 (224)
T ss_dssp             ---SSCTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGGCCGGG---GGSTTHHHHHHHHHHHHHHTT
T ss_pred             ---cchhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCccccccCCCCC---ccchhhHHHHHHHHHHHHHHh
Confidence               123578999999999999988 4 89999999866543322   122222221   124679999999996543334


Q ss_pred             hcCCCEEEEecCceecCCC
Q 028444          158 SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~~~  176 (209)
                      +.+++++++||+++|||+.
T Consensus       148 ~~~i~~~ivrp~~v~g~~~  166 (224)
T 3h2s_A          148 NANVNWIGISPSEAFPSGP  166 (224)
T ss_dssp             CTTSCEEEEEECSBCCCCC
T ss_pred             cCCCcEEEEcCccccCCCc
Confidence            6799999999999999854

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=1e-31  Score=209.59  Aligned_cols=162  Identities=20%  Similarity=0.218  Sum_probs=136.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~   81 (209)
                      +|+|||||||||++++++|+++|++|++++|+..+..  .  .+++++.+|++|.+.+.++++++|+|||||+..  ...
T Consensus         4 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~--~~~   77 (267)
T 3ay3_A            4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--E--AHEEIVACDLADAQAVHDLVKDCDGIIHLGGVS--VER   77 (267)
T ss_dssp             EEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--C--TTEEECCCCTTCHHHHHHHHTTCSEEEECCSCC--SCC
T ss_pred             eEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--C--CCccEEEccCCCHHHHHHHHcCCCEEEECCcCC--CCC
Confidence            7999999999999999999999999999999865421  1  368999999999999999999999999999975  335


Q ss_pred             CccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC-ccccCCCccccccccCChHHHHHHHHHHHHHHHh-hc
Q 028444           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (209)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~  159 (209)
                      ++...+++|+.++.++++++++. +.++||++||..+|+... ..+.+|+.+.   .+.+.|+.+|..+|.+++.+. +.
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~~~~~~E~~~~---~~~~~Y~~sK~~~e~~~~~~~~~~  153 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPRTTRIDTEVPR---RPDSLYGLSKCFGEDLASLYYHKF  153 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBTTSCBCTTSCC---CCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCCCCCCCCCCCC---CCCChHHHHHHHHHHHHHHHHHHc
Confidence            56788999999999999999987 478999999999998643 3445555433   234689999999999998875 46


Q ss_pred             CCCEEEEecCceec
Q 028444          160 GLPIVPVYPGVIYG  173 (209)
Q Consensus       160 ~~~~~~~rp~~v~g  173 (209)
                      +++++++||+++|+
T Consensus       154 gi~~~~lrp~~v~~  167 (267)
T 3ay3_A          154 DIETLNIRIGSCFP  167 (267)
T ss_dssp             CCCEEEEEECBCSS
T ss_pred             CCCEEEEeceeecC
Confidence            89999999999984

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=1.3e-31  Score=216.28  Aligned_cols=187  Identities=20%  Similarity=0.281  Sum_probs=149.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CC-eEEEEEcCCCCCCCCC---CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~-~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+||||||||+||++++++|+++ |+ +|++++|++.+...+.   ...++.++.+|++|.+.+.++++++|+|||+|+.
T Consensus        22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~  101 (344)
T 2gn4_A           22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAAL  101 (344)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCCC
Confidence            58999999999999999999999 97 9999999754321110   0137999999999999999999999999999996


Q ss_pred             CCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                      ...  ...++.+.+++|+.++.++++++.+. +.++||++||..++.+                 .+.|+.+|.++|.++
T Consensus       102 ~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~p-----------------~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A          102 KHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAANP-----------------INLYGATKLCSDKLF  163 (344)
T ss_dssp             CCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSSC-----------------CSHHHHHHHHHHHHH
T ss_pred             CCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCCC-----------------ccHHHHHHHHHHHHH
Confidence            432  22356788999999999999999988 4789999999765421                 256999999999999


Q ss_pred             HHHhh----cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          154 LQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~~----~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      +.+.+    .+++++++|||++|||+.    .+++.++.....+.         ....|+|++|+|+++
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v  228 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFV  228 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHH
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHH
Confidence            98764    579999999999999864    34555555554443         345689999998763

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.97  E-value=5.3e-32  Score=207.60  Aligned_cols=156  Identities=20%  Similarity=0.259  Sum_probs=129.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCce-EEEEccCCCHHHHHHHhcCcCEEEEcCccCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (209)
                      |+|+||||||+||++++++|+++|++|++++|+..+...+.. .++ +++++|++  +++.+++.++|+||||||...  
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~--   96 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP--   96 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT--
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC--
Confidence            689999999999999999999999999999998765433222 268 99999999  778888899999999999653  


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                      ..++.+.+++|+.++.++++++++. +.++||++||...+.+.       ..+    .+.+.|+.+|..+|.+++   +.
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~-------~~~----~~~~~Y~~sK~~~e~~~~---~~  161 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDPD-------QGP----MNMRHYLVAKRLADDELK---RS  161 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCGG-------GSC----GGGHHHHHHHHHHHHHHH---HS
T ss_pred             CCCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCCC-------CCh----hhhhhHHHHHHHHHHHHH---HC
Confidence            2567889999999999999999987 47899999995544321       000    123569999999999876   57


Q ss_pred             CCCEEEEecCceecCCC
Q 028444          160 GLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~  176 (209)
                      +++++++||+++||+..
T Consensus       162 gi~~~~lrpg~v~~~~~  178 (236)
T 3e8x_A          162 SLDYTIVRPGPLSNEES  178 (236)
T ss_dssp             SSEEEEEEECSEECSCC
T ss_pred             CCCEEEEeCCcccCCCC
Confidence            99999999999999864

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.97  E-value=5.4e-31  Score=201.36  Aligned_cols=192  Identities=18%  Similarity=0.166  Sum_probs=144.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~~   77 (209)
                      ++++||||+++||++++++|+++|++|++.+|+.+.++.... .++..+++|++|++++.++++   ++|++|||||...
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~   90 (242)
T 4b79_A           12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH-PRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISR   90 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCC-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhc-CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            369999999999999999999999999999999877655433 479999999999999888775   6899999999754


Q ss_pred             C----CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH----
Q 028444           78 P----WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----  147 (209)
Q Consensus        78 ~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~----  147 (209)
                      +    ..++|++.+++|+.+++.+++++.+.++  ..+||++||...+.+.+..              ..|+.||+    
T Consensus        91 ~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~--------------~~Y~asKaav~~  156 (242)
T 4b79_A           91 DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADR--------------PAYSASKGAIVQ  156 (242)
T ss_dssp             GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSC--------------HHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCC--------------HHHHHHHHHHHH
Confidence            3    3346788999999999999998876542  3689999998765433222              34999999    


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       148 ~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +++.++.+++++|++++.+.||++.+|....... -.+..+.+....+...+..++|+|++
T Consensus       157 ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~-~~~~~~~~~~~~PlgR~g~peeiA~~  216 (242)
T 4b79_A          157 LTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA-DVEATRRIMQRTPLARWGEAPEVASA  216 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCC-----CC-CHHHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC-CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            6667777788889999999999999985321111 01223333444444456667777654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=1.1e-30  Score=220.90  Aligned_cols=204  Identities=24%  Similarity=0.326  Sum_probs=154.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC---CC--------------CCCCceEEEEccCCCHHHHHHHh
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GL--------------PSEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~---~~--------------~~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      |+|||||||||||++++++|.++|++|++++|+..+..   ++              ....+++++.+|+++.+.+. +.
T Consensus       151 ~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~  229 (508)
T 4f6l_B          151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LP  229 (508)
T ss_dssp             EEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CS
T ss_pred             CeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Cc
Confidence            47999999999999999999999999999999866210   00              01137999999999977777 67


Q ss_pred             cCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccC-----CccccCCCcccccccc
Q 028444           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF  138 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~-----~~~~~~e~~~~~~~~~  138 (209)
                      .++|+|||||+... ...++...+++|+.++.++++++.+  +.++|||+||..+ |..     ...+.+|+.+.....+
T Consensus       230 ~~~D~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          230 ENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             SCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCC
T ss_pred             cCCCEEEECCceec-CCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCcccccccccccccC
Confidence            89999999999754 3356778899999999999999998  3589999999988 431     2334455544333335


Q ss_pred             CChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCc------chhHHHHHHHHhcC--------CceEEEEEEee
Q 028444          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLVRLLFSQ--------HFSLVFFHCQI  204 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~------~~~~~~~~~~~~~~--------~~~~~~~~~~d  204 (209)
                      .+.|+.+|..+|.+++.+.+.|++++++||+++|||.....      ...+..++.....+        +....|+|++|
T Consensus       306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~D  385 (508)
T 4f6l_B          306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDT  385 (508)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHH
Confidence            68899999999999999887899999999999999976332      23466666665532        45668999999


Q ss_pred             eeecC
Q 028444          205 TCHAI  209 (209)
Q Consensus       205 va~~i  209 (209)
                      +|+++
T Consensus       386 vA~ai  390 (508)
T 4f6l_B          386 TARQI  390 (508)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=4.9e-31  Score=202.68  Aligned_cols=185  Identities=19%  Similarity=0.123  Sum_probs=143.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+++||||+|+||++++++|+++|+  +|++++|++.+...... .++.++.+|++|.+++.++++++|+||||||....
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~   97 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRG   97 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-CCceEEecCcCCHHHHHHHhcCCCEEEECCCcccc
Confidence            5799999999999999999999999  99999998765543221 36889999999999999999999999999996422


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                      . .+++.++++|+.++.++++++++. +.++||++||..+|++.                ...|+.+|...|.+++.+  
T Consensus        98 ~-~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~----------------~~~Y~~sK~~~e~~~~~~--  157 (242)
T 2bka_A           98 K-AGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS----------------NFLYLQVKGEVEAKVEEL--  157 (242)
T ss_dssp             H-HHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHHTT--
T ss_pred             c-CCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCCC----------------cchHHHHHHHHHHHHHhc--
Confidence            1 235678999999999999999887 46899999999887521                145999999999887653  


Q ss_pred             cCC-CEEEEecCceecCCCCCcchhHHHHHHHHhcCCc----eEEEEEEeeeeecC
Q 028444          159 EGL-PIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHF----SLVFFHCQITCHAI  209 (209)
Q Consensus       159 ~~~-~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~i  209 (209)
                       ++ +++++|||++|||....  .....+........+    ...+++++|+|+++
T Consensus       158 -~~~~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  210 (242)
T 2bka_A          158 -KFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAM  210 (242)
T ss_dssp             -CCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHH
T ss_pred             -CCCCeEEEcCceecCCCCCC--cHHHHHHHHhhcccCccccCCcccCHHHHHHHH
Confidence             66 69999999999996421  122222232222211    23589999998763

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=2.8e-31  Score=201.11  Aligned_cols=192  Identities=18%  Similarity=0.224  Sum_probs=129.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |||+||||||+||++++++|+++|++|++++|++.+...+.  .+++++++|++|.+.  +++.++|+|||||+....  
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~--   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPD--   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTT--
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCcc--
Confidence            89999999999999999999999999999999876544333  379999999999887  788999999999996321  


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc-cccCCCccccccccCChHHHHHHHHHHHHHHHh-h
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADKIALQAA-S  158 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~  158 (209)
                           ..+.|+.++.++++++++. +.+++|++||..+|..... .+..++.+.   .+.+.|+.+|...|.+..... +
T Consensus        75 -----~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~---~~~~~y~~~k~~~e~~~~~~~~~  145 (221)
T 3ew7_A           75 -----EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLESKGL---REAPYYPTARAQAKQLEHLKSHQ  145 (221)
T ss_dssp             -----TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC----------------------CCCSCCHHHHHHHHHHHHTTT
T ss_pred             -----ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCccccccCCC---CCHHHHHHHHHHHHHHHHHHhhc
Confidence                 2567999999999999987 4789999999877644322 222222221   123559999999998743333 5


Q ss_pred             cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeecC
Q 028444          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       159 ~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  209 (209)
                      .+++++++||+++|||+... ..+.. .-...........+++++|+|+++
T Consensus       146 ~gi~~~ivrp~~v~g~~~~~-~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~  194 (221)
T 3ew7_A          146 AEFSWTYISPSAMFEPGERT-GDYQI-GKDHLLFGSDGNSFISMEDYAIAV  194 (221)
T ss_dssp             TTSCEEEEECSSCCCCC-----------------------CCCHHHHHHHH
T ss_pred             cCccEEEEeCcceecCCCcc-CceEe-ccccceecCCCCceEeHHHHHHHH
Confidence            79999999999999984321 11110 000011011123578889998763

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.97  E-value=6.8e-30  Score=223.46  Aligned_cols=204  Identities=16%  Similarity=0.167  Sum_probs=154.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CC--CCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |+||||||+||||++++++|+++|++|++++|+......    +.  ...+++++.+|++|.+++.++++  ++|+|||+
T Consensus        12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            579999999999999999999999999999987543210    00  01368899999999999999988  89999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCc----cccCCCccccccccCChHHHHH
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG----YIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~----~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      |+....  ...++.+.+++|+.++.++++++++. +.++||++||..+|+....    .+.+|+.+.   .+.+.|+.+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~---~p~~~Y~~sK  167 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECPL---GPTNPYGHTK  167 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC---CCCSHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHhCCCccccccCCccccCCC---CCCChHHHHH
Confidence            996432  12345678999999999999999887 4789999999999975421    233343322   2346799999


Q ss_pred             HHHHHHHHHHhh---cCCCEEEEecCceecCCCCC---------cchhHHHHHHHHh----------------cCCceEE
Q 028444          147 AVADKIALQAAS---EGLPIVPVYPGVIYGPGKLT---------TGNLVAKLVRLLF----------------SQHFSLV  198 (209)
Q Consensus       147 ~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~~~~---------~~~~~~~~~~~~~----------------~~~~~~~  198 (209)
                      .++|.+++.+.+   .+++++++||+++|||+...         ...++..+.....                .+.....
T Consensus       168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  247 (699)
T 1z45_A          168 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD  247 (699)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEEC
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEe
Confidence            999999988753   58999999999999986321         1234443333222                2345568


Q ss_pred             EEEEeeeeec
Q 028444          199 FFHCQITCHA  208 (209)
Q Consensus       199 ~~~~~dva~~  208 (209)
                      |+|++|+|++
T Consensus       248 ~i~v~Dva~a  257 (699)
T 1z45_A          248 YIHVVDLAKG  257 (699)
T ss_dssp             EEEHHHHHHH
T ss_pred             eEEHHHHHHH
Confidence            9999999976

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.97  E-value=2.5e-31  Score=209.11  Aligned_cols=186  Identities=18%  Similarity=0.171  Sum_probs=138.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+|||+ ||||++++++|+++|++|++++|++.+...+.. .+++++.+|++|.+     +.++|+|||+|+..... 
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~-   77 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG-   77 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB-
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEecccccc-----cCCCCEEEECCCccccc-
Confidence            58999998 999999999999999999999998654332221 37999999999954     78999999999964332 


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhc-CCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                       +         ..+.++++++++. .++++|||+||..+|+.....+.+|+.+..   +.+.|+.+|..+|.+++.+  .
T Consensus        78 -~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~~~~~~--~  142 (286)
T 3ius_A           78 -D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLT---PTAARGRWRVMAEQQWQAV--P  142 (286)
T ss_dssp             -C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCC---CCSHHHHHHHHHHHHHHHS--T
T ss_pred             -c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCC---CCCHHHHHHHHHHHHHHhh--c
Confidence             1         1257788888873 256899999999999977666666665433   3368999999999999887  6


Q ss_pred             CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeecC
Q 028444          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  209 (209)
                      +++++++||+++|||+.................+.....|+|++|+|+++
T Consensus       143 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  192 (286)
T 3ius_A          143 NLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVL  192 (286)
T ss_dssp             TCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHH
T ss_pred             CCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHH
Confidence            89999999999999976432111110000011233456799999999763

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=1.8e-29  Score=189.06  Aligned_cols=180  Identities=23%  Similarity=0.217  Sum_probs=138.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |+|+||||||+||++++++|+++|++|++++|++.+..... ..+++++.+|++|.+++.++++++|+|||+|+....  
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--   80 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND--   80 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC--
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC--
Confidence            68999999999999999999999999999999876554331 247899999999999999999999999999996433  


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                      .+   ..++|+.++.++++++++. +.++||++||..+|+.....+.          +...|+.+|..+|.+++   +.+
T Consensus        81 ~~---~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~----------~~~~y~~~K~~~e~~~~---~~~  143 (206)
T 1hdo_A           81 LS---PTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLR---ESG  143 (206)
T ss_dssp             CS---CCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCSCG----------GGHHHHHHHHHHHHHHH---HTC
T ss_pred             CC---ccchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcccccc----------cchhHHHHHHHHHHHHH---hCC
Confidence            12   2358999999999999987 4789999999988875432111          23569999999998875   368


Q ss_pred             CCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce-EEEEEEeeeeec
Q 028444          161 LPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS-LVFFHCQITCHA  208 (209)
Q Consensus       161 ~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  208 (209)
                      ++++++||+++ +++... ..+...     . +..+ ..+++++|+|++
T Consensus       144 i~~~~lrp~~~-~~~~~~-~~~~~~-----~-~~~~~~~~i~~~Dva~~  184 (206)
T 1hdo_A          144 LKYVAVMPPHI-GDQPLT-GAYTVT-----L-DGRGPSRVISKHDLGHF  184 (206)
T ss_dssp             SEEEEECCSEE-ECCCCC-SCCEEE-----S-SSCSSCSEEEHHHHHHH
T ss_pred             CCEEEEeCCcc-cCCCCC-cceEec-----c-cCCCCCCccCHHHHHHH
Confidence            99999999998 333211 111000     1 1222 478899998875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=3.1e-30  Score=200.32  Aligned_cols=161  Identities=25%  Similarity=0.280  Sum_probs=123.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.++....  .++.++++|++|.+++.++++       ++|+||||
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   88 (257)
T 3tpc_A            9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNC   88 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            599999999999999999999999999999988765543322  368899999999999888775       79999999


Q ss_pred             CccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcC---------CccEEEEEccceeeccCCccccCCCccc
Q 028444           73 AALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQVH  133 (209)
Q Consensus        73 a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~ss~~~~~~~~~~~~~e~~~~  133 (209)
                      ||....          ..+++++.+++|+.++.++++++.+.+         +..+||++||...+.+..+.        
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  160 (257)
T 3tpc_A           89 AGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ--------  160 (257)
T ss_dssp             CCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC--------
T ss_pred             CCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCC--------
Confidence            997532          123566789999999999999998753         23579999998776543221        


Q ss_pred             cccccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCCC
Q 028444          134 EEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                            ..|+.+|++.+.+.    .++.++|+++++++||++++|..
T Consensus       161 ------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  201 (257)
T 3tpc_A          161 ------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMM  201 (257)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhh
Confidence                  45999998666554    45555799999999999999853

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=7.2e-30  Score=216.27  Aligned_cols=190  Identities=16%  Similarity=0.114  Sum_probs=146.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC--
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (209)
                      |+|||||||||||++|+++|+++|++|++++|+..+..         .+.+|+.+.  +..++.++|+|||||+....  
T Consensus       148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~  216 (516)
T 3oh8_A          148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------KRFWDPLNP--ASDLLDGADVLVHLAGEPIFGR  216 (516)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------CEECCTTSC--CTTTTTTCSEEEECCCC-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------ceeecccch--hHHhcCCCCEEEECCCCccccc
Confidence            79999999999999999999999999999999876432         256787753  35667899999999997422  


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeec-cCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~-~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                       ...++..++++|+.++.+|++++.+..++++|||+||..+|+ .....+.+|+.+.    +.+.|+.+|...|.+....
T Consensus       217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~----~~~~y~~~~~~~E~~~~~~  292 (516)
T 3oh8_A          217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES----GDDFLAEVCRDWEHATAPA  292 (516)
T ss_dssp             CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC----CSSHHHHHHHHHHHTTHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC----CcChHHHHHHHHHHHHHHH
Confidence             234456789999999999999955544678999999999998 4444455555543    2367999999999887776


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHh--------cCCceEEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLF--------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~dva~~i  209 (209)
                      .+.|++++++||+++|||+.    ..+..++....        .++....|+|++|+|+++
T Consensus       293 ~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai  349 (516)
T 3oh8_A          293 SDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY  349 (516)
T ss_dssp             HHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred             HhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence            67899999999999999974    33444433322        245667899999999863

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=8.9e-30  Score=198.13  Aligned_cols=185  Identities=18%  Similarity=0.155  Sum_probs=138.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+...    .++.++++|++|++++.++++       ++|+||||||
T Consensus        30 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg  105 (260)
T 3un1_A           30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAG  105 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            69999999999999999999999999999998765433    268999999999999888775       7999999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ....      ..+++++.+++|+.++.++++++.+.   .+.+++|++||..++.+....            +...|+.+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~------------~~~~Y~~s  173 (260)
T 3un1_A          106 VFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM------------PSALASLT  173 (260)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC------------CCHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC------------ccHHHHHH
Confidence            7422      22456778999999999999988542   235789999998765432211            12459999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       146 K~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |++.+.+.+.++    ++|+++++++||++++|....  ..    ........+...+++++|+|++
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~----~~~~~~~~p~~r~~~~~dva~a  234 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA--ET----HSTLAGLHPVGRMGEIRDVVDA  234 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG--GG----HHHHHTTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH--HH----HHHHhccCCCCCCcCHHHHHHH
Confidence            997776666554    458999999999999986421  11    1122333344456667777764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.96  E-value=8.2e-31  Score=202.27  Aligned_cols=162  Identities=17%  Similarity=0.151  Sum_probs=130.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+++||++++++|+++|++|++++|+.++++++.+     ..++.++++|++|++++.++++       ++|+
T Consensus         8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A            8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            369999999999999999999999999999998765432211     1468899999999999877764       6899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|||||...+       ..++|++.+++|+.+++++++++.+.+   +..+||++||...+.+.+..             
T Consensus        88 LVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~-------------  154 (254)
T 4fn4_A           88 LCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG-------------  154 (254)
T ss_dssp             EEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC-------------
T ss_pred             EEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC-------------
Confidence            9999996421       234678899999999999999987754   34689999998765433222             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                       ..|+.+|+    +++.++.+++++|++++.+.||++.+|..
T Consensus       155 -~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  195 (254)
T 4fn4_A          155 -APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIG  195 (254)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCT
T ss_pred             -hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccc
Confidence             35999999    66777777888899999999999998843

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.96  E-value=1.4e-29  Score=197.74  Aligned_cols=183  Identities=22%  Similarity=0.255  Sum_probs=143.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~~~~~   78 (209)
                      |+|+||||+||||++++++|+ +|++|++++|+... .   .  +   +.+|++|.+++.+++++  +|+|||||+....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~---~--~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q---G--G---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T---T--C---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C---C--C---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            899999999999999999998 58999999998642 1   1  3   88999999999999886  9999999996532


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        ...++.+.+++|+.++.++++++.+.. . +||++||..+|++... +.+|+.+.   .+.+.|+.+|.++|.+++. 
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~-~~~e~~~~---~~~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKG-NYKEEDIP---NPINYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSC-SBCTTSCC---CCSSHHHHHHHHHHHHHCC-
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCC-CcCCCCCC---CCCCHHHHHHHHHHHHHhC-
Confidence              134677899999999999999999874 3 9999999999976543 34444332   2346799999999988765 


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCc------eEEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHF------SLVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~i  209 (209)
                          +++.++||+.+||+     ..+...++.....+..      ...++|++|+|+++
T Consensus       144 ----~~~~~iR~~~v~G~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  193 (273)
T 2ggs_A          144 ----DDSLIIRTSGIFRN-----KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAI  193 (273)
T ss_dssp             ----TTCEEEEECCCBSS-----SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHH
T ss_pred             ----CCeEEEeccccccc-----cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHH
Confidence                67899999999983     2344445455555544      34578899998763

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.96  E-value=4e-29  Score=197.81  Aligned_cols=187  Identities=17%  Similarity=0.229  Sum_probs=135.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC--CC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--EP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~--~~   78 (209)
                      |||||||||||||++|+++|+++||+|++++|++.+.       .   +.+|    +.....++++|+|||+|+..  ..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------~---~~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------R---ITWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------E---EEHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------e---eecc----hhhHhhccCCCEEEEeccCcccch
Confidence            9999999999999999999999999999999975431       1   2222    33345678999999999842  11


Q ss_pred             ---CC-CCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           79 ---WL-PDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        79 ---~~-~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                         +. .....+++.|+.++.+|++++.... +...+|++||..+|++....+.+|+.+..+   .+.|+..|...|...
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~---~~~~~~~~~~~e~~~  143 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD---FDFFSNLVTKWEAAA  143 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC---SSHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccc---cchhHHHHHHHHHHH
Confidence               11 1234578899999999999998764 234699999999999877666666654433   244666666555432


Q ss_pred             HHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHh--------cCCceEEEEEEeeeeecC
Q 028444          154 LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLF--------SQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~dva~~i  209 (209)
                       ...+.+++++++||+.+|||+.    ..+..++....        .++....|+|++|+|+++
T Consensus       144 -~~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~  202 (298)
T 4b4o_A          144 -RLPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGIL  202 (298)
T ss_dssp             -CCSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHH
T ss_pred             -HhhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHH
Confidence             2235689999999999999974    33444444332        356667899999999864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=7.3e-30  Score=199.74  Aligned_cols=191  Identities=19%  Similarity=0.163  Sum_probs=138.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++....  ..++.++.+|++|.+++.++++       ++|+||||
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   92 (271)
T 3tzq_B           13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNN   92 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999998765432211  1368899999999999888775       78999999


Q ss_pred             CccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           73 AALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        73 a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||...+        ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~  158 (271)
T 3tzq_B           93 AAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM--------------STA  158 (271)
T ss_dssp             CCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS--------------CHH
T ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC--------------ChH
Confidence            997522        223456789999999999999995432   3578999999877644322              145


Q ss_pred             HHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+.+|++.+.+.+.    +.++|+++++++||++++|....  .........+....+...+.+++|+|++
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~r~~~p~dvA~~  227 (271)
T 3tzq_B          159 YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV--GLPQPIVDIFATHHLAGRIGEPHEIAEL  227 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc--cCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99999976665554    44579999999999999986431  1112222333333333345556666654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=1e-30  Score=203.21  Aligned_cols=193  Identities=21%  Similarity=0.149  Sum_probs=140.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.++.++...  ..++.++++|++|++++.++++       ++|+||||
T Consensus        10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~   89 (259)
T 4e6p_A           10 SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNN   89 (259)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999997654322111  1368899999999999888776       79999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+    ...+||++||...+.+..+.              ..|
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~Y  155 (259)
T 4e6p_A           90 AALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALV--------------AIY  155 (259)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB--------------HHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCC--------------hHH
Confidence            997432      224567789999999999999887653    13589999998776433221              459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhH--------HHHHHHHhcCCceEEEEEEeeeeec
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLV--------AKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +.+|++.+.+.+.+    .++|+++++++||+++||........+        .........+.+...+++++|+|++
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  233 (259)
T 4e6p_A          156 CATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHH
Confidence            99999777666554    456899999999999998531110000        1111222223344567788888765

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=3.4e-29  Score=203.81  Aligned_cols=169  Identities=20%  Similarity=0.233  Sum_probs=140.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (209)
                      |||+|||||||||++++++|+++|+ +|+.++|+                    +|.+++.++++++|+|||+|+...+ 
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~-   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRP-   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCC-
Confidence            8999999999999999999999998 77766543                    6788999999999999999997543 


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh-
Q 028444           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-  158 (209)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-  158 (209)
                       .++...+++|+.++.++++++++.+..++||++||..+|+                  .+.|+.+|.++|.+++.+.+ 
T Consensus        60 -~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~------------------~~~Y~~sK~~~E~~~~~~~~~  120 (369)
T 3st7_A           60 -EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ------------------DNPYGESKLQGEQLLREYAEE  120 (369)
T ss_dssp             -TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS------------------CSHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC------------------CCCchHHHHHHHHHHHHHHHH
Confidence             4667789999999999999999885334999999998886                  15699999999999999875 


Q ss_pred             cCCCEEEEecCceecCCCCCc-chhHHHHHHHHhcC--------CceEEEEEEeeeeecC
Q 028444          159 EGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQ--------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       159 ~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~i  209 (209)
                      .+++++++||+++|||+.... ..++..++.....+        +....++|++|+|+++
T Consensus       121 ~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  180 (369)
T 3st7_A          121 YGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEI  180 (369)
T ss_dssp             HCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHH
T ss_pred             hCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHH
Confidence            599999999999999976332 35677777666543        3446899999999763

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.96  E-value=1.3e-28  Score=199.54  Aligned_cols=198  Identities=16%  Similarity=0.169  Sum_probs=147.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-----CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC---cCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG---CHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~vi~~   72 (209)
                      |+|+|||||||||++++++|+++|     ++|++++|+..... . ...+++++.+|++|.+++.+++++   +|+|||+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H-EDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C-CSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c-ccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            789999999999999999999999     99999999876543 1 224789999999999999999988   9999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEE-------EEccceeeccCC--ccccCCCccccccccCChH
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKII-------YTSSFFALGSTD--GYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i-------~~ss~~~~~~~~--~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |+...   .++...+++|+.++.++++++++.. +.++||       |+||..+|+...  ..+.+|+.+..+  +.+.|
T Consensus        80 a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~--~~~~y  154 (364)
T 2v6g_A           80 TWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLK--YMNFY  154 (364)
T ss_dssp             CCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCS--SCCHH
T ss_pred             CCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCc--cchhh
Confidence            99642   4677899999999999999999862 467887       799999998642  234455443221  13567


Q ss_pred             HHHHHHHHHHHHHHhh-cC-CCEEEEecCceecCCCCCc-chhHHH-HHHHH--hcCCc------------eEEEEEEee
Q 028444          143 ERSKAVADKIALQAAS-EG-LPIVPVYPGVIYGPGKLTT-GNLVAK-LVRLL--FSQHF------------SLVFFHCQI  204 (209)
Q Consensus       143 ~~sK~~~e~~~~~~~~-~~-~~~~~~rp~~v~g~~~~~~-~~~~~~-~~~~~--~~~~~------------~~~~~~~~d  204 (209)
                      .    .+|.+++++.+ .+ ++++++||+++|||+.... ...... ++..+  ..+..            ...++|++|
T Consensus       155 ~----~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~D  230 (364)
T 2v6g_A          155 Y----DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL  230 (364)
T ss_dssp             H----HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHH
T ss_pred             H----HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHH
Confidence            3    47777777764 56 9999999999999986432 222333 22322  12321            235677788


Q ss_pred             eeecC
Q 028444          205 TCHAI  209 (209)
Q Consensus       205 va~~i  209 (209)
                      +|+++
T Consensus       231 va~a~  235 (364)
T 2v6g_A          231 IAEHH  235 (364)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=1.4e-29  Score=199.01  Aligned_cols=193  Identities=21%  Similarity=0.179  Sum_probs=138.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..  ..++.++++|++|.+++.++++       ++|+||||
T Consensus         7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~   86 (281)
T 3m1a_A            7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNN   86 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            69999999999999999999999999999998765433211  1378999999999999888775       68999999


Q ss_pred             CccCC------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||...      ...+++++.+++|+.++.++++.+.+.+   +.++||++||..++.+..+              .+.|+
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~  152 (281)
T 3m1a_A           87 AGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG--------------FSAYS  152 (281)
T ss_dssp             CCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------CHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC--------------chHHH
Confidence            99641      1223566789999999887777765432   3579999999876643221              24599


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC--------cchhHHHH--HHHHhcCCceEEEEEEeeeeec
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT--------TGNLVAKL--VRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+|.+.+.+.+.++    ++|+++++++||++++|....        ...+....  ......+.+...+++++|+|++
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a  231 (281)
T 3m1a_A          153 ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAA  231 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHH
Confidence            99998777766654    468999999999999874211        11222221  2233345555677889998875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.96  E-value=5.3e-30  Score=196.94  Aligned_cols=160  Identities=17%  Similarity=0.225  Sum_probs=127.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++|||||+++||++++++|+++|++|++.+|++++++++.+ ..++.++++|++|++++.++++       ++|++||||
T Consensus         4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNA   83 (247)
T 3ged_A            4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNA   83 (247)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            69999999999999999999999999999998654433222 2478899999999999877764       689999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      |....      ..++|++.+++|+.+++.+++++.+.+  +..++|++||...+.+.+..              ..|+.|
T Consensus        84 G~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~--------------~~Y~as  149 (247)
T 3ged_A           84 CRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDS--------------EAYASA  149 (247)
T ss_dssp             CCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTC--------------HHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCC--------------HHHHHH
Confidence            96422      335688899999999999999887653  23689999998765433222              349999


Q ss_pred             HH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       146 K~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      |+    +++.++.++++ +++++++.||++.+|..
T Consensus       150 Kaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~  183 (247)
T 3ged_A          150 KGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQ  183 (247)
T ss_dssp             HHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC-
T ss_pred             HHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCc
Confidence            99    55566666665 89999999999998753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.96  E-value=1.6e-29  Score=195.00  Aligned_cols=190  Identities=21%  Similarity=0.168  Sum_probs=138.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|+||||+|+||++++++|+++  |++|++++|++.+...+.  .+++++.+|++|.+++.++++++|+|||||+....
T Consensus         5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~   82 (253)
T 1xq6_A            5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQGIDALVILTSAVPK   82 (253)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHHcCCCEEEEecccccc
Confidence            58999999999999999999999  899999999765433332  36789999999999999999999999999996421


Q ss_pred             C--------C-------CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           79 W--------L-------PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        79 ~--------~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      .        .       +++.+.+++|+.++.++++++++. +.++||++||..++....+.         ..+..+.|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~~~---------~~~~~~~y~  152 (253)
T 1xq6_A           83 MKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDHPL---------NKLGNGNIL  152 (253)
T ss_dssp             ECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTCGG---------GGGGGCCHH
T ss_pred             ccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccCCCCCCcc---------ccccchhHH
Confidence            1        1       122356899999999999999987 46899999998765321110         011114588


Q ss_pred             HHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          144 RSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+|..+|.+++.   .+++++++||+.+||+..... ..+.........+  ...+++++|+|++
T Consensus       153 ~sK~~~e~~~~~---~~i~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dva~~  211 (253)
T 1xq6_A          153 VWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVR-ELLVGKDDELLQT--DTKTVPRADVAEV  211 (253)
T ss_dssp             HHHHHHHHHHHT---SSSCEEEEEECEEECSCSSSS-CEEEESTTGGGGS--SCCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHh---CCCceEEEecceeecCCcchh-hhhccCCcCCcCC--CCcEEcHHHHHHH
Confidence            999999988754   689999999999999864211 0000000011111  2347888888765

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=3.6e-30  Score=198.78  Aligned_cols=190  Identities=19%  Similarity=0.163  Sum_probs=140.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+. ++.+.+.     ...++.++++|++|.+++.++++       ++|+
T Consensus         6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A            6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999988754 2211110     11368899999999999888775       7899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+.++              .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  151 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG--------------Q  151 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC--------------C
Confidence            9999997422      223566789999999999999995432   3468999999877644322              1


Q ss_pred             ChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|.+.+.+.    .++.++|+++++++||++++|.....   ..........+.+...+.+++|+|++
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~~~~dva~~  221 (246)
T 3osu_A          152 ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIPLARFGQDTDIANT  221 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            45999999655554    44556799999999999999864322   23334444555555567777787764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=2.9e-30  Score=201.06  Aligned_cols=160  Identities=24%  Similarity=0.274  Sum_probs=125.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC--CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    ..  ..++.++++|++|++++.++++       ++|+
T Consensus        12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (262)
T 3pk0_A           12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDV   91 (262)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999999986543221    11  1368999999999999888765       7999


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceee-ccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||.... .+.+              .
T Consensus        92 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  157 (262)
T 3pk0_A           92 VCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYP--------------G  157 (262)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT--------------T
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC--------------C
Confidence            9999997422      223466789999999999999987753   35799999997653 2111              1


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|++.+.+.+.+    .++|+++++++||++++|.
T Consensus       158 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  198 (262)
T 3pk0_A          158 WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG  198 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence            245999999766665554    4569999999999999974

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.96  E-value=1.2e-30  Score=201.48  Aligned_cols=192  Identities=17%  Similarity=0.069  Sum_probs=140.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+++||++++++|+++|++|++.+|+.+++++..     ...++..+++|++|++++.++++       ++|++
T Consensus        11 valVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   90 (255)
T 4g81_D           11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDIL   90 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEE
Confidence            6999999999999999999999999999999865433211     11468899999999999877764       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..++|++.+++|+.+++.+++++.+.+    +..+||++||...+.+.+..              
T Consensus        91 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~--------------  156 (255)
T 4g81_D           91 INNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV--------------  156 (255)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc--------------
Confidence            999997422      335688899999999999999886643    34689999998766443322              


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|+    +++.++.+++++|++++.+.||++.+|....... -.+....+....+...+..++|+|++
T Consensus       157 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~Pl~R~g~pediA~~  228 (255)
T 4g81_D          157 APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-DKQFDSWVKSSTPSQRWGRPEELIGT  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-CHHHHHHHHHHSTTCSCBCGGGGHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-CHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence            34999999    6667777778889999999999999884311000 01122222223333456667777654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=1e-30  Score=201.28  Aligned_cols=193  Identities=22%  Similarity=0.217  Sum_probs=142.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~   76 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+++.. ..+++++.+|++|.+++.++++   ++|+||||||..
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~   87 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV   87 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCccc
Confidence            479999999999999999999999999999997643322111 1257788999999999999886   489999999964


Q ss_pred             CC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ..      ..+++++.+++|+.++.++++++.+.+   + .++||++||..+|.+.++              ...|+.+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK  153 (244)
T 1cyd_A           88 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN--------------LITYSSTK  153 (244)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------BHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC--------------cchhHHHH
Confidence            32      223456789999999999999887642   2 468999999887754321              14599999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          147 AVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       147 ~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+.+.+.+.++    +.++++++++||+++||..... .....++..+..+.+...+++++|+|++
T Consensus       154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~  218 (244)
T 1cyd_A          154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-SADPEFARKLKERHPLRKFAEVEDVVNS  218 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-TCCHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc-ccCHHHHHHHHhcCCccCCCCHHHHHHH
Confidence            98888777654    3589999999999999743100 0012222333334444567888988875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=5.5e-30  Score=199.48  Aligned_cols=160  Identities=14%  Similarity=0.130  Sum_probs=125.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..      ..++.++++|++|.+++.++++       ++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   88 (263)
T 3ai3_A            9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADI   88 (263)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999997653322110      1368899999999999888775       7999


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              .
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  154 (263)
T 3ai3_A           89 LVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY--------------E  154 (263)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC--------------c
Confidence            9999997422      223466789999999999999886532   3578999999887754321              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.+    .++|+++++++||+++||.
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  194 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD  194 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence            45999999777666554    4468999999999999984

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=6.3e-30  Score=197.65  Aligned_cols=190  Identities=18%  Similarity=0.151  Sum_probs=138.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+....  .....++++|++|++++.++++       ++|+||||
T Consensus        11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n   90 (248)
T 3op4_A           11 VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNN   90 (248)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999998654332211  1257889999999999888775       78999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ...|+
T Consensus        91 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  156 (248)
T 3op4_A           91 AGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG--------------QANYA  156 (248)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------CHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC--------------ChHHH
Confidence            997432      234567789999999999999987632   3468999999876643322              14599


Q ss_pred             HHHHHHH----HHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          144 RSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       144 ~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+|++.+    .+..++.++|+++++++||.+.+|......   ...........+...+.+++|+|++
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p~~r~~~p~dva~~  222 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---DEQRTATLAQVPAGRLGDPREIASA  222 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---HHHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            9999544    455555567999999999999998543221   1222222333344455666666654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=2.9e-29  Score=193.66  Aligned_cols=195  Identities=17%  Similarity=0.104  Sum_probs=139.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh---cCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~vi~~a~~~~   77 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++.+....++.++++|++|.+++.++.   .++|+||||||...
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~   86 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVH   86 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCC
Confidence            369999999999999999999999999999998654433322236889999999999887664   47899999999743


Q ss_pred             C------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      .      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+...             ....|+.+|++
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~~Y~~sK~a  153 (246)
T 2ag5_A           87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV-------------NRCVYSTTKAA  153 (246)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT-------------TBHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC-------------CCccHHHHHHH
Confidence            2      223466789999999999999987532   3579999999876543210             11459999997


Q ss_pred             HHHHHHHH----hhcCCCEEEEecCceecCCCCCc-c--hhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          149 ADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT-G--NLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       149 ~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+.+.+.+    .++|+++++++||+++||..... .  .........+....+...+++++|+|++
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  220 (246)
T 2ag5_A          154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAML  220 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            77666554    44699999999999999842100 0  0011222222222233346788888765

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.96  E-value=3.8e-30  Score=199.17  Aligned_cols=192  Identities=17%  Similarity=0.138  Sum_probs=141.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+.+.     ...++.++.+|++|++++.++++       ++|+
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47999999999999999999999999999999764322110     01368899999999999988775       7999


Q ss_pred             EEEcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           69 IFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        69 vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||||....     ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ..
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~  157 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN--------------MT  157 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------CH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC--------------Cc
Confidence            9999997432     123456789999999999999886431   3578999999877653221              24


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .|+.+|.+.+.+.+.++    +.++++++++||+++|+....  ...+........+.+...+++++|+|++
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~  227 (255)
T 1fmc_A          158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS--VITPEIEQKMLQHTPIRRLGQPQDIANA  227 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT--TCCHHHHHHHHHTCSSCSCBCHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh--ccChHHHHHHHhcCCcccCCCHHHHHHH
Confidence            59999998887776654    348999999999999974211  0112233334444444567788888765

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=1.6e-29  Score=198.36  Aligned_cols=161  Identities=18%  Similarity=0.215  Sum_probs=124.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------C-CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------P-SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++..       . ...++.++.+|++|++++.++++       ++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (278)
T 1spx_A            8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKL   87 (278)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCC
Confidence            699999999999999999999999999999986432211       1 11368899999999999888776       79


Q ss_pred             CEEEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEcccee-eccCCccccCCCccc
Q 028444           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFA-LGSTDGYIADENQVH  133 (209)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~-~~~~~~~~~~e~~~~  133 (209)
                      |+||||||....          ..+++++.+++|+.++.++++++.+.+  ..++||++||..+ +.+.++         
T Consensus        88 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  158 (278)
T 1spx_A           88 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD---------  158 (278)
T ss_dssp             CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT---------
T ss_pred             CEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCC---------
Confidence            999999996422          223466789999999999999987753  1279999999876 543211         


Q ss_pred             cccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          134 EEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                           ...|+.+|...+.+.+.+    .++|+++++++||++++|..
T Consensus       159 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  200 (278)
T 1spx_A          159 -----FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG  200 (278)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccc
Confidence                 145999999777666554    45699999999999999853

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=1.1e-29  Score=197.19  Aligned_cols=162  Identities=17%  Similarity=0.150  Sum_probs=125.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.++.    . ...++.++++|++|.+++.++++       ++|+
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3699999999999999999999999999999986543221    1 11368999999999999887775       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+    +..+||++||...+.+..+.             
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  153 (257)
T 3imf_A           87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV-------------  153 (257)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc-------------
Confidence            9999996422      234567789999999999999985432    35689999998766432221             


Q ss_pred             CChHHHHHHHHHHHHH----HHh-hcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIAL----QAA-SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~----~~~-~~~~~~~~~rp~~v~g~~~  176 (209)
                       ..|+.+|++.+.+.+    ++. ++|+++++++||.+++|..
T Consensus       154 -~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~  195 (257)
T 3imf_A          154 -IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGG  195 (257)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCC
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcc
Confidence             459999996655544    444 5599999999999998853

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.96  E-value=1.1e-29  Score=196.96  Aligned_cols=193  Identities=23%  Similarity=0.178  Sum_probs=140.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++++.+  ..++.++++|++|.+++.++++       ++|+||||
T Consensus        10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   89 (255)
T 4eso_A           10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN   89 (255)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999998654332211  1368999999999998877664       68999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+. .++||++||...+.+.++              ...|+.+
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  155 (255)
T 4eso_A           90 AGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG--------------MSVYSAS  155 (255)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT--------------BHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC--------------chHHHHH
Confidence            997432      2345677899999999999999988642 358999999877654322              1459999


Q ss_pred             HHHHHHHHHH----HhhcCCCEEEEecCceecCCCCC---cchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          146 KAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       146 K~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |++.+.+.+.    +.++|+++++++||++.+|....   .......+........+...+.+++|+|++
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  225 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARA  225 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHH
Confidence            9966665554    44569999999999999985321   111222222222223333445667777654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.96  E-value=6.4e-30  Score=199.11  Aligned_cols=193  Identities=20%  Similarity=0.140  Sum_probs=139.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      .+|||||+++||++++++|+++|++|++.+|+.+++++..+  ..++..+++|++|++++.++++       ++|++|||
T Consensus        31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNN  110 (273)
T 4fgs_A           31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVN  110 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            58999999999999999999999999999998765433211  1368899999999999877764       58999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ||....      ..++|++.+++|+.+++++++++.+.++. +++|++||...+.+.+..              ..|+.+
T Consensus       111 AG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~--------------~~Y~as  176 (273)
T 4fgs_A          111 AGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF--------------SVYAAS  176 (273)
T ss_dssp             CCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC--------------HHHHHH
T ss_pred             CCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc--------------hHHHHH
Confidence            996321      33567889999999999999999887632 479999998765433222              359999


Q ss_pred             HH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCc----chhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTT----GNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       146 K~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+    +++.++.+++++|++++.+.||.+.+|.....    ......+...+...-+...+..++|+|++
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~  247 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAA  247 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99    55666666777899999999999998853111    11122233333333334455666776654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.95  E-value=1.8e-29  Score=197.96  Aligned_cols=192  Identities=20%  Similarity=0.114  Sum_probs=139.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+..     ..++.++++|++|.+++.++++       ++|+
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            379999999999999999999999999999998765432211     1368899999999999988775       7899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+    ...+||++||...+......            .
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~------------~  180 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQ------------Q  180 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSS------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCC------------C
Confidence            9999997532      223566788999999999999887643    12689999998765322110            1


Q ss_pred             CChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|++.+.+.+.    +.++++++++++||++.++.......    ....+....+...+.+++|+|++
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~----~~~~~~~~~p~~r~~~pedvA~~  250 (276)
T 3r1i_A          181 VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD----YHALWEPKIPLGRMGRPEELTGL  250 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG----GHHHHGGGSTTSSCBCGGGSHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH----HHHHHHhcCCCCCCcCHHHHHHH
Confidence            24599999966665554    44568999999999999986422211    22222333333456667777764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.95  E-value=1.6e-29  Score=199.90  Aligned_cols=189  Identities=22%  Similarity=0.227  Sum_probs=135.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCC--CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSE--GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++..    ...  .++.++++|++|.+++.++++       ++|+
T Consensus        43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  122 (293)
T 3rih_A           43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV  122 (293)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999999987654321    111  368999999999998877664       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceee-ccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+ .+..+              
T Consensus       123 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~--------------  188 (293)
T 3rih_A          123 VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG--------------  188 (293)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT--------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC--------------
Confidence            9999997422      223567789999999999999885321   35799999997653 22111              


Q ss_pred             CChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeee
Q 028444          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCH  207 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  207 (209)
                      ...|+.+|.+.+.+.+.    +.++|+++++++||++++|...   ..............+...+..++|+|+
T Consensus       189 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~p~~r~~~p~dvA~  258 (293)
T 3rih_A          189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV---DMGEEYISGMARSIPMGMLGSPVDIGH  258 (293)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH---HTCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh---hccHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            24599999966665554    4556999999999999997421   111222333333333334445555554

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.95  E-value=1.5e-29  Score=196.12  Aligned_cols=191  Identities=15%  Similarity=0.095  Sum_probs=141.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC-CCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|++++|+ .++.+.+..     ..++.++.+|++|.+++.++++       ++|
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999998 544322110     1368899999999999988876       799


Q ss_pred             EEEEcCcc-CCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C--c---cEEEEEccceeec-cCCccccCCCc
Q 028444           68 VIFHTAAL-VEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--V---EKIIYTSSFFALG-STDGYIADENQ  131 (209)
Q Consensus        68 ~vi~~a~~-~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~---~~~i~~ss~~~~~-~~~~~~~~e~~  131 (209)
                      +||||||. ...      ..+++++.+++|+.++.++++++.+.+   +  .   .+||++||...+. +.+        
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------  159 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP--------  159 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT--------
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC--------
Confidence            99999996 221      112356789999999999999876532   1  1   6899999987664 211        


Q ss_pred             cccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeee
Q 028444          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCH  207 (209)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  207 (209)
                            +...|+.+|.+.+.+.+.++    ++++++++++||+++||.....   .......+..+.+...+++++|+|+
T Consensus       160 ------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~  230 (258)
T 3afn_B          160 ------GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIPMGRFGTAEEMAP  230 (258)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCTTCSCBCGGGTHH
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCCCCcCCCHHHHHH
Confidence                  12459999998887776654    4589999999999999864321   1233334444444456788999887


Q ss_pred             c
Q 028444          208 A  208 (209)
Q Consensus       208 ~  208 (209)
                      +
T Consensus       231 ~  231 (258)
T 3afn_B          231 A  231 (258)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=3.6e-29  Score=195.05  Aligned_cols=192  Identities=16%  Similarity=0.132  Sum_probs=124.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHh--------cCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDAC--------FGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~--------~~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+...     ...++.++.+|++|.+++.+++        .++|
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            36999999999999999999999999999999765332110     0136889999999999888776        4689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+...              
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  160 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--------------  160 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC--------------
Confidence            99999996422      223456789999999999999985421   3579999999877653221              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|.+.+.+.+.++    ++++++++++||+++||.....  ....+........+...+++++|+|++
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
T 1xq1_A          161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV--YDDEFKKVVISRKPLGRFGEPEEVSSL  232 (266)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh--cCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            2569999998777766654    4589999999999999864211  011112222222233357788888865

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.95  E-value=1.8e-29  Score=195.55  Aligned_cols=161  Identities=12%  Similarity=0.078  Sum_probs=120.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.+..     ..++.++++|++|.+++.++++      ++|+||
T Consensus         9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv   88 (252)
T 3h7a_A            9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTI   88 (252)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEE
Confidence            69999999999999999999999999999998765433211     1368999999999999988775      679999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ...
T Consensus        89 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  154 (252)
T 3h7a_A           89 FNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG--------------FAA  154 (252)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT--------------CHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC--------------Ccc
Confidence            99997432      223567789999999999999886542   2468999999876643222              145


Q ss_pred             HHHHHHHHHHHHH----HHhhcCCCE-EEEecCceecCCC
Q 028444          142 YERSKAVADKIAL----QAASEGLPI-VPVYPGVIYGPGK  176 (209)
Q Consensus       142 Y~~sK~~~e~~~~----~~~~~~~~~-~~~rp~~v~g~~~  176 (209)
                      |+.+|++.+.+.+    ++.++|+++ ++++||.+.++..
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~  194 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWV  194 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhh
Confidence            9999996665554    445568999 8999999998753

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=9.6e-29  Score=189.79  Aligned_cols=184  Identities=26%  Similarity=0.164  Sum_probs=136.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc------CcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~~a~   74 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.. .+      .+.++++|++|.+++.++++      ++|+||||||
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc------ceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            47999999999999999999999999999999865 21      46889999999999988886      7899999999


Q ss_pred             cCCC------CCC----CccchhhhHHHHHHHHHHHHHhcCC---------ccEEEEEccceeeccCCccccCCCccccc
Q 028444           75 LVEP------WLP----DPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        75 ~~~~------~~~----~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      ....      ..+    ++.+.+++|+.++.++++++.+.+.         .++||++||..++.+..+           
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  144 (242)
T 1uay_A           76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-----------  144 (242)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT-----------
T ss_pred             ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC-----------
Confidence            6422      111    5567899999999999999876532         128999999887764321           


Q ss_pred             cccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce-EEEEEEeeeeec
Q 028444          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS-LVFFHCQITCHA  208 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  208 (209)
                         ...|+.+|.+.+.+.+.+    .++|+++++++||+++|+.....   ...+...+..+.+. ..+++++|+|++
T Consensus       145 ---~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~  216 (242)
T 1uay_A          145 ---QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPFPPRLGRPEEYAAL  216 (242)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCSSCSCCCHHHHHHH
T ss_pred             ---CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCCcccCCCHHHHHHH
Confidence               145999998777665554    44589999999999999753211   11222223333322 356778888764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=4.8e-28  Score=187.26  Aligned_cols=157  Identities=23%  Similarity=0.227  Sum_probs=121.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.+. ..    .++.++.+|++|.+++.++++       ++|+|||||
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~A   82 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-EQ----YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA   82 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-SC----CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-hc----CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            369999999999999999999999999999998652 11    147889999999999988775       689999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  148 (250)
T 2fwm_X           83 GILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG--------------MSAYGA  148 (250)
T ss_dssp             CCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT--------------CHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC--------------CchHHH
Confidence            97432      223567789999999999999985432   3579999999877643211              245999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       145 sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +|...+.+.+.+    .++|+++++++||++++|..
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  184 (250)
T 2fwm_X          149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQ  184 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccc
Confidence            999777666554    44699999999999999853

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=9e-30  Score=196.80  Aligned_cols=197  Identities=16%  Similarity=0.106  Sum_probs=139.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc----CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~vi~~a~~~   76 (209)
                      |+++||||+||||++++++|+++|++|++++|+..+...        .+.+|++|.+++.++++    ++|+||||||..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            279999999999999999999999999999998664322        15689999999988876    799999999975


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccc-cCC-------Cccc----cccccCCh
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYI-ADE-------NQVH----EEKYFCTQ  141 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~-~~e-------~~~~----~~~~~~~~  141 (209)
                      .. ..++.+.+++|+.++.++++++.+.   .+.++||++||..+|+.....+ ..+       +.+.    ....+.+.
T Consensus        74 ~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T 2dkn_A           74 VT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA  152 (255)
T ss_dssp             TT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHH
T ss_pred             Cc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchh
Confidence            42 3567889999999999999988765   2347999999998886532111 000       0000    00012356


Q ss_pred             HHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          142 YERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~~----~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+.+|.+.+.+.+.+++    .+++++++|||+++||.....  .......... ..+ +...+++++|+|++
T Consensus       153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~dva~~  223 (255)
T 2dkn_A          153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRR-FVA-PLGRGSEPREVAEA  223 (255)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHS-CCC-TTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHH-HHH-HhcCCCCHHHHHHH
Confidence            99999999888877653    589999999999999842100  0000111110 111 33457888888865

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.95  E-value=5.5e-30  Score=198.86  Aligned_cols=191  Identities=19%  Similarity=0.165  Sum_probs=138.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.     ...++.++++|++|.+++.++++       ++|+|
T Consensus        14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   93 (256)
T 3gaf_A           14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVL   93 (256)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999865432211     11368999999999999887775       78999


Q ss_pred             EEcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           70 FHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        70 i~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||||....     ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ...
T Consensus        94 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  159 (256)
T 3gaf_A           94 VNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR--------------MAS  159 (256)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT--------------CHH
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC--------------chH
Confidence            999997432     223566789999999999999986542   3468999999877643221              145


Q ss_pred             HHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+.+|++.+.+.+.    +.++|+++++++||++.+|....  .........+....+...+.+++|+|++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~p~~r~~~~~dva~~  228 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT--VLTPEIERAMLKHTPLGRLGEAQDIANA  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH--HCCHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh--ccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            99999966665554    44568999999999999873210  0012223333333444456666776654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.7e-29  Score=196.78  Aligned_cols=191  Identities=19%  Similarity=0.068  Sum_probs=138.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+....  ..++.++++|++|.+++.++++       ++|+|||
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~   92 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCA   92 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            369999999999999999999999999999997643321110  0157889999999999988776       7999999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||....      ..+++++.+++|+.++.++++++.+.+   + .++||++||..++.+.+.              ...
T Consensus        93 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  158 (263)
T 3ak4_A           93 NAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL--------------LAH  158 (263)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT--------------CHH
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC--------------chh
Confidence            9996422      223466789999999999999887642   2 479999999876543211              245


Q ss_pred             HHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhH-----------HHHHHHHhcCCceEEEEEEeeee
Q 028444          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLV-----------AKLVRLLFSQHFSLVFFHCQITC  206 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~dva  206 (209)
                      |+.+|...+.+.+.+    .++|+++++++||++++|...   ...           ......+....+...+++++|+|
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  235 (263)
T 3ak4_A          159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE---REIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVA  235 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH---HHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh---hhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence            999999766665554    456999999999999997421   111           12222233333344577888888


Q ss_pred             ec
Q 028444          207 HA  208 (209)
Q Consensus       207 ~~  208 (209)
                      ++
T Consensus       236 ~~  237 (263)
T 3ak4_A          236 DV  237 (263)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=2e-29  Score=194.72  Aligned_cols=191  Identities=16%  Similarity=0.137  Sum_probs=132.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc---CcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~   75 (209)
                      +++|||||+|+||++++++|+++|++|++++|+.++++.+..  ..++.++.+|+++.+++.++++   ++|+||||||.
T Consensus        15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~   94 (249)
T 3f9i_A           15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGI   94 (249)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC-
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            379999999999999999999999999999997654332211  1368899999999999988886   68999999996


Q ss_pred             CC------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           76 VE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        76 ~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ..      ...+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|+.+|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK  160 (249)
T 3f9i_A           95 TSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG--------------QANYCASK  160 (249)
T ss_dssp             ------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC--------------SHHHHHHH
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC--------------CchhHHHH
Confidence            42      2446778899999999999999886542   3468999999887754322              14599999


Q ss_pred             HHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          147 AVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       147 ~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ++.+.+.+.    +.++|+++++++||++.++......   .........+.+...+.+++|+|++
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~  223 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---EKQREAIVQKIPLGTYGIPEDVAYA  223 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---HHHHHHHHHHCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            966665554    4456899999999999998542211   1222222223333345556666554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=7e-29  Score=191.59  Aligned_cols=193  Identities=20%  Similarity=0.166  Sum_probs=139.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-----C-CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+     . ...++.++++|++|.+++.++++       ++|
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            3699999999999999999999999999999975432211     1 11368999999999999888775       799


Q ss_pred             EEEEcCccCCCC---------CCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccc
Q 028444           68 VIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        68 ~vi~~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      +||||||.....         .+++++.+++|+.++.++++.+.+.+   +.++||++||..++.+..+           
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------  151 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG-----------  151 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----------
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC-----------
Confidence            999999964321         13456789999999999888876532   3579999999877643221           


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                         ...|+.+|.+.+.+.+.++    ++++++++++||+++||..... .....+...+..+.+...+++++|+|++
T Consensus       152 ---~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~  224 (250)
T 2cfc_A          152 ---RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR-LDQPELRDQVLARIPQKEIGTAAQVADA  224 (250)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH-HTSHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc-cCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence               1459999998887776654    4489999999999999864210 0011222333333334456777887764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=1.3e-29  Score=197.66  Aligned_cols=193  Identities=16%  Similarity=0.155  Sum_probs=140.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++++.     ...++.++++|++|.+++.++++       ++|+|
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   92 (264)
T 3ucx_A           13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVV   92 (264)
T ss_dssp             EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            6999999999999999999999999999999865432211     11368999999999999887775       68999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....       ..+++++.+++|+.++.++++++.+.+  +..+||++||...+.+..+.              .
T Consensus        93 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~  158 (264)
T 3ucx_A           93 INNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKY--------------G  158 (264)
T ss_dssp             EECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTC--------------H
T ss_pred             EECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCcc--------------H
Confidence            999986421       223567789999999999999887643  12699999998766433221              3


Q ss_pred             hHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcch--------hHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGN--------LVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .|+.+|+..+.+.+.    +.++|+++++++||++++|.......        ...........+.+...+.+++|+|++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  238 (264)
T 3ucx_A          159 AYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHH
Confidence            599999966655554    44578999999999999974210000        012333444445555567777777764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.95  E-value=9.5e-29  Score=194.35  Aligned_cols=175  Identities=21%  Similarity=0.191  Sum_probs=137.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|+|||||||||++++++|+++  |++|++++|++.+...+.. .+++++.+|++|.+++.++++++|+|||+|+..  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~--   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH--   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC--
Confidence            78999999999999999999998  9999999998665432211 368899999999999999999999999999852  


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                          +..  ++|+.++.++++++++. +.++||++||..+|..                 ..+|+.+|..+|.+++.   
T Consensus        78 ----~~~--~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-----------------~~~y~~~K~~~E~~~~~---  130 (287)
T 2jl1_A           78 ----YDN--TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEES-----------------IIPLAHVHLATEYAIRT---  130 (287)
T ss_dssp             ----SCH--HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGGC-----------------CSTHHHHHHHHHHHHHH---
T ss_pred             ----cCc--hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC-----------------CCchHHHHHHHHHHHHH---
Confidence                111  67999999999999987 5789999999877521                 02499999999998764   


Q ss_pred             cCCCEEEEecCceecCCCCCcchhHHHHHHH----HhcCCceEEEEEEeeeeec
Q 028444          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRL----LFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       159 ~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~  208 (209)
                      .+++++++||++++++..   ..++...+..    ...++....|+|++|+|++
T Consensus       131 ~~~~~~ilrp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  181 (287)
T 2jl1_A          131 TNIPYTFLRNALYTDFFV---NEGLRASTESGAIVTNAGSGIVNSVTRNELALA  181 (287)
T ss_dssp             TTCCEEEEEECCBHHHHS---SGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHH
T ss_pred             cCCCeEEEECCEeccccc---hhhHHHHhhCCceeccCCCCccCccCHHHHHHH
Confidence            689999999999988642   1223333322    1124455678999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.95  E-value=6.5e-30  Score=199.53  Aligned_cols=190  Identities=18%  Similarity=0.189  Sum_probs=133.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++++..  ..++.++++|++|.+++.++++       ++|+||||
T Consensus        29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  108 (266)
T 3grp_A           29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNN  108 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999997654332211  1368999999999999888775       68999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+.              ..|+
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------------~~Y~  174 (266)
T 3grp_A          109 AGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQ--------------TNYC  174 (266)
T ss_dssp             CCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CH--------------HHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCc--------------hhHH
Confidence            997422      224567889999999999998886542   34689999998766432211              4599


Q ss_pred             HHHHHHHH----HHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          144 RSKAVADK----IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       144 ~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+|++.+.    +..++.++|+++++++||++.++.....   .......+....+...+.+++|+|++
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~~r~~~~edvA~~  240 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMIPMKRMGIGEEIAFA  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99995554    4555556799999999999998732111   12222333334444455666666654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.95  E-value=3.9e-29  Score=187.25  Aligned_cols=148  Identities=20%  Similarity=0.162  Sum_probs=121.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC---cCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~vi~~a~~~~   77 (209)
                      |+++||||+|+||++++++|+ +|++|++++|+..            .+.+|++|++++.+++++   +|+||||||...
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            799999999999999999999 9999999999754            367899999999888865   899999999642


Q ss_pred             C------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      .      ..+++.+.+++|+.++.++++++.+.+. .++||++||..++.+..+              ...|+.+|...+
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~~~~  136 (202)
T 3d7l_A           71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQ--------------GASAAMANGAVT  136 (202)
T ss_dssp             CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTT--------------CHHHHHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCc--------------cHHHHHHHHHHH
Confidence            2      1123456789999999999999987632 258999999866543211              145999999999


Q ss_pred             HHHHHHhh---cCCCEEEEecCceecCC
Q 028444          151 KIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       151 ~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      .+.+.++.   .+++++++|||+++|+.
T Consensus       137 ~~~~~~~~e~~~gi~v~~v~pg~v~~~~  164 (202)
T 3d7l_A          137 AFAKSAAIEMPRGIRINTVSPNVLEESW  164 (202)
T ss_dssp             HHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred             HHHHHHHHHccCCeEEEEEecCccCCch
Confidence            99988763   38999999999999973

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=2.7e-28  Score=189.06  Aligned_cols=154  Identities=22%  Similarity=0.232  Sum_probs=122.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+      .+.++++|++|++++.++++       ++|+||||||
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg   96 (253)
T 2nm0_A           23 SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAG   96 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            6999999999999999999999999999999865432      37889999999999877765       4799999999


Q ss_pred             cCC------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ...      ...+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ...|+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  162 (253)
T 2nm0_A           97 VTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG--------------QANYAAS  162 (253)
T ss_dssp             CCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHH--------------HHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC--------------cHHHHHH
Confidence            642      2446788899999999999999887642   3579999999876532211              1459999


Q ss_pred             HHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       146 K~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      |.+.+.+.+.+    .+.++++++++||++.++.
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  196 (253)
T 2nm0_A          163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDM  196 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence            99776665554    4468999999999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.95  E-value=7.8e-28  Score=189.06  Aligned_cols=161  Identities=19%  Similarity=0.153  Sum_probs=125.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----------------C-CCCCceEEEEccCCCHHHHHHHhc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----------------L-PSEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----------------~-~~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      +++||||+|+||++++++|+++|++|++++|+......                + ....++.++++|++|.+++.++++
T Consensus        12 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   91 (281)
T 3s55_A           12 TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVA   91 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            69999999999999999999999999999997432100                0 001368899999999999888775


Q ss_pred             -------CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccC
Q 028444           65 -------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIAD  128 (209)
Q Consensus        65 -------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~  128 (209)
                             ++|+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+    
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  167 (281)
T 3s55_A           92 EAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA----  167 (281)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC----
Confidence                   68999999997432      223567789999999999999986532   3468999999877643322    


Q ss_pred             CCccccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          129 ENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       129 e~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                                ...|+.+|++.+.+.+.+    .++|+++++++||++++|..
T Consensus       168 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  209 (281)
T 3s55_A          168 ----------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT  209 (281)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence                      145999999766665554    45689999999999999864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=4.1e-29  Score=192.71  Aligned_cols=161  Identities=22%  Similarity=0.182  Sum_probs=123.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+....++.++.+|++|.+++.++++       ++|+|||||
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~A   85 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYA   85 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            3699999999999999999999999999999986543322111147889999999999887765       489999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++++.+.+   +.++||++||.. +.+..+              ...|+.
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~--------------~~~Y~a  150 (245)
T 1uls_A           86 GITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLG--------------QANYAA  150 (245)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTT--------------CHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCC--------------chhHHH
Confidence            96432      223466789999999999999987653   346899999987 322111              145999


Q ss_pred             HHHHHHHH----HHHHhhcCCCEEEEecCceecCCC
Q 028444          145 SKAVADKI----ALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       145 sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +|...+.+    ..++.++|+++++++||++.++..
T Consensus       151 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  186 (245)
T 1uls_A          151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMT  186 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcch
Confidence            99965554    445556699999999999999853

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=2.5e-29  Score=193.94  Aligned_cols=191  Identities=17%  Similarity=0.119  Sum_probs=139.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+.+..     ..++.++++|++|.+++.++++       ++|+
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            379999999999999999999999999999998654322111     1368999999999999888764       4799


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+.++              .
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  151 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG--------------Q  151 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC--------------c
Confidence            9999997532      234566789999999999999886642   3468999999877654322              1


Q ss_pred             ChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|.+.+.+    ..++.++++++++++||++.++......   .........+.+...+.+++|+|++
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~  221 (247)
T 3lyl_A          152 TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT---DEQKSFIATKIPSGQIGEPKDIAAA  221 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC---HHHHHHHHTTSTTCCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc---HHHHHHHhhcCCCCCCcCHHHHHHH
Confidence            4599999955554    4455556999999999999998643221   2222333344444556677777654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=7.9e-30  Score=198.44  Aligned_cols=161  Identities=27%  Similarity=0.236  Sum_probs=124.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC--------CCceEEEEccCCCHHHHHHHhcC----
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS--------EGALELVYGDVTDYRSLVDACFG----   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~--------~~~~~~~~~Dl~~~~~~~~~~~~----   65 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.    +..        ..++.++.+|++|.+++.+++++    
T Consensus         9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (264)
T 2pd6_A            9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQAC   88 (264)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999997543221    111        03588999999999998877754    


Q ss_pred             ---c-CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCc
Q 028444           66 ---C-HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        66 ---~-d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                         + |+||||||....      ..+++++.+++|+.++.++++++.+.+   + .++||++||...+.+..+       
T Consensus        89 ~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  161 (264)
T 2pd6_A           89 FSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG-------  161 (264)
T ss_dssp             HSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT-------
T ss_pred             hCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC-------
Confidence               4 999999997432      223566789999999999999987653   2 468999999866543211       


Q ss_pred             cccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                             ...|+.+|.+.+.+.+.++    +++++++++|||+++||..
T Consensus       162 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  203 (264)
T 2pd6_A          162 -------QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT  203 (264)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred             -------ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence                   1459999997776665543    4689999999999999864

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=3.7e-29  Score=194.23  Aligned_cols=194  Identities=16%  Similarity=0.049  Sum_probs=139.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+...     ...++.++++|++|.+++.++++       ++|+|
T Consensus        15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   94 (260)
T 3awd_A           15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDIL   94 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999754322110     01368999999999999888775       68999


Q ss_pred             EEcCccCC-C------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVE-P------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||... .      ..+++.+.+++|+.++.++++++.+.+   +.++||++||..++.+....            +.
T Consensus        95 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------~~  162 (260)
T 3awd_A           95 VACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ------------QQ  162 (260)
T ss_dssp             EECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS------------CC
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC------------Cc
Confidence            99999643 1      112346789999999999999887632   35789999998665432111            11


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|.+.+.+.+.++    +++++++++|||+++||.... ..........+..+.+...+++++|+|++
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF-GMEKPELYDAWIAGTPMGRVGQPDEVASV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH-HHTCHHHHHHHHHTCTTSSCBCHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc-ccCChHHHHHHHhcCCcCCCCCHHHHHHH
Confidence            459999998887776654    368999999999999986420 00012233333334333456778888765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.95  E-value=1.5e-28  Score=192.03  Aligned_cols=156  Identities=20%  Similarity=0.161  Sum_probs=124.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +++|||||+|+||++++++|+++|++|++++|+.....     ..+..+++|++|.+++.++++       ++|+|||||
T Consensus        15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA   89 (269)
T 3vtz_A           15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNA   89 (269)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            37999999999999999999999999999999876542     257889999999999888775       689999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+....              ..|+.
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~Y~a  155 (269)
T 3vtz_A           90 GIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNA--------------AAYVT  155 (269)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC--------------HHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCC--------------hhHHH
Confidence            97432      223456789999999999999987642   34689999998877543222              45999


Q ss_pred             HHHHHHHHHHHHhh---cCCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      +|++.+.+.+.++.   .++++++++||+++++.
T Consensus       156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~  189 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPM  189 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcc
Confidence            99987777766542   17999999999999873

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.95  E-value=5.6e-29  Score=193.20  Aligned_cols=189  Identities=22%  Similarity=0.148  Sum_probs=135.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc------CcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~~a~~   75 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++..... ..++.++++|++|.+++.++++      ++|+||||||.
T Consensus        11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~   89 (257)
T 3tl3_A           11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-GDRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGT   89 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence            6999999999999999999999999999999644321111 1368999999999999888775      79999999996


Q ss_pred             CC----------CCCCCccchhhhHHHHHHHHHHHHHhcC-----------CccEEEEEccceeeccCCccccCCCcccc
Q 028444           76 VE----------PWLPDPSRFFAVNVEGLKNVVQAAKETK-----------TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        76 ~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      ..          ...+++++.+++|+.++.++++++.+.+           +..+||++||...+.+..+.         
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  160 (257)
T 3tl3_A           90 GNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQ---------  160 (257)
T ss_dssp             SHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHH---------
T ss_pred             CCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCC---------
Confidence            31          2335577899999999999999987653           23589999998776432211         


Q ss_pred             ccccCChHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce-EEEEEEeeeeec
Q 028444          135 EKYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS-LVFFHCQITCHA  208 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~  208 (209)
                           ..|+.+|++.+    .+..++.++|+++++++||++.+|.....   ............+. ..+.+++|+|++
T Consensus       161 -----~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~r~~~p~dva~~  231 (257)
T 3tl3_A          161 -----AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQVPHPSRLGNPDEYGAL  231 (257)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTSSSSCSCBCHHHHHHH
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhcCCCCCCccCHHHHHHH
Confidence                 45999999555    44555556799999999999999854221   12222222222222 456667777654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.95  E-value=3.2e-29  Score=195.63  Aligned_cols=160  Identities=14%  Similarity=0.190  Sum_probs=124.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...       ...++.++++|++|.+++.++++       ++|
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   94 (267)
T 1iy8_A           15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   94 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999999999999999765332110       02368899999999999888775       689


Q ss_pred             EEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||||....       ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+             
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  161 (267)
T 1iy8_A           95 GFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN-------------  161 (267)
T ss_dssp             EEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS-------------
T ss_pred             EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCC-------------
Confidence            99999997432       123466789999999998888775532   3479999999876543211             


Q ss_pred             cCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|...+.+.+.    +.++|+++++++||++++|.
T Consensus       162 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  202 (267)
T 1iy8_A          162 -QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  202 (267)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             -CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence             14599999966665554    44569999999999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.95  E-value=6.3e-29  Score=192.43  Aligned_cols=161  Identities=16%  Similarity=0.128  Sum_probs=128.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+++||++++++|+++|++|++.+|+.++.....    ...++.++++|++|++++.++++       ++|++|
T Consensus         9 valVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLV   88 (258)
T 4gkb_A            9 VVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLV   88 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            6999999999999999999999999999999876532111    12478999999999998877664       689999


Q ss_pred             EcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           71 HTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        71 ~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||||....     ..++|++.+++|+.+++.+++++.+.+  +..+||++||...+.+.+..              ..|+
T Consensus        89 NnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~--------------~~Y~  154 (258)
T 4gkb_A           89 NNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT--------------SGYC  154 (258)
T ss_dssp             ECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC--------------HHHH
T ss_pred             ECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc--------------hHHH
Confidence            99997422     234577889999999999999987654  23689999998776543322              3499


Q ss_pred             HHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       144 ~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      .+|+    +++.++.+++++|++++.+.||++.+|..
T Consensus       155 asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  191 (258)
T 4gkb_A          155 ASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLY  191 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhH
Confidence            9999    66667777778899999999999998853

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.95  E-value=4.9e-29  Score=195.38  Aligned_cols=188  Identities=16%  Similarity=0.126  Sum_probs=134.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCCCCC------CCceEEEEccCCCH----HHHHHHhc------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPS------EGALELVYGDVTDY----RSLVDACF------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~------~~~~~~~~~Dl~~~----~~~~~~~~------   64 (209)
                      +++||||+|+||++++++|+++|++|++++| +.++.+.+..      ..++.++++|++|.    +++.++++      
T Consensus        13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   92 (276)
T 1mxh_A           13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   92 (276)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhc
Confidence            6999999999999999999999999999999 6443221100      13688999999999    88877765      


Q ss_pred             -CcCEEEEcCccCCC------CC-----------CCccchhhhHHHHHHHHHHHHHhcC--Cc------cEEEEEcccee
Q 028444           65 -GCHVIFHTAALVEP------WL-----------PDPSRFFAVNVEGLKNVVQAAKETK--TV------EKIIYTSSFFA  118 (209)
Q Consensus        65 -~~d~vi~~a~~~~~------~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~~------~~~i~~ss~~~  118 (209)
                       ++|+||||||....      ..           +++++.+++|+.++.++++++.+.+  +.      ++||++||..+
T Consensus        93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  172 (276)
T 1mxh_A           93 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  172 (276)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhh
Confidence             68999999996422      11           3455789999999999999998864  22      68999999877


Q ss_pred             eccCCccccCCCccccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC
Q 028444          119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH  194 (209)
Q Consensus       119 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~  194 (209)
                      +.+..+              ...|+.+|.+.+.+.+.+    .++|+++++++||++++| .. ..   ......+....
T Consensus       173 ~~~~~~--------------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~-~~---~~~~~~~~~~~  233 (276)
T 1mxh_A          173 DLPLPG--------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA-MP---QETQEEYRRKV  233 (276)
T ss_dssp             GSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS-SC---HHHHHHHHTTC
T ss_pred             cCCCCC--------------CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc-CC---HHHHHHHHhcC
Confidence            643221              145999999777666554    455899999999999999 31 11   11222222222


Q ss_pred             ceEE-EEEEeeeeec
Q 028444          195 FSLV-FFHCQITCHA  208 (209)
Q Consensus       195 ~~~~-~~~~~dva~~  208 (209)
                      +... +++++|+|++
T Consensus       234 p~~r~~~~~~dva~~  248 (276)
T 1mxh_A          234 PLGQSEASAAQIADA  248 (276)
T ss_dssp             TTTSCCBCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHH
Confidence            2223 6677777764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.8e-29  Score=193.39  Aligned_cols=192  Identities=20%  Similarity=0.205  Sum_probs=140.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC--CCCC-CCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLP-SEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~   76 (209)
                      +++||||+++||++++++|+++|++|++.+|+..+.  +.+. ...++..+++|++|+++++.+++  ++|++|||||..
T Consensus        11 valVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~   90 (247)
T 4hp8_A           11 KALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGII   90 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCC
Confidence            689999999999999999999999999999975421  1111 11468899999999998887765  589999999974


Q ss_pred             CC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ..      ..++|++.+++|+.+++.+++++.+.+    +..+||++||...+.+....              ..|+.||
T Consensus        91 ~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~--------------~~Y~asK  156 (247)
T 4hp8_A           91 RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV--------------PSYTAAK  156 (247)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC--------------HHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC--------------hHHHHHH
Confidence            22      345688899999999999999876543    24689999998765433222              3499999


Q ss_pred             H----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          147 A----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       147 ~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +    +++.++.+++++|++++.+.||++.+|...... .-....+.+...-+...+..++|+|++
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~-~~~~~~~~~~~~~PlgR~g~peeiA~~  221 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR-ADAARNKAILERIPAGRWGHSEDIAGA  221 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHTTCTTSSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc-cCHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence            9    677777888888999999999999988431100 001122233334444456666776654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.95  E-value=6.9e-30  Score=200.82  Aligned_cols=192  Identities=19%  Similarity=0.130  Sum_probs=136.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC----CCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS----EGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~----~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    ..    ..++.++++|++|++++.++++       ++
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   92 (281)
T 3svt_A           13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRL   92 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            699999999999999999999999999999986532211    11    1268899999999999887775       68


Q ss_pred             CEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      |+||||||....       ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+...            
T Consensus        93 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  160 (281)
T 3svt_A           93 HGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW------------  160 (281)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT------------
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC------------
Confidence            999999996221       223466789999999999999887653   2358999999877644322            


Q ss_pred             ccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          137 YFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                        ...|+.||++.+.+.+.+    .++++++++++||++++|..... ..............+...+.+++|+|++
T Consensus       161 --~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p~~r~~~~~dva~~  233 (281)
T 3svt_A          161 --FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI-TESAELSSDYAMCTPLPRQGEVEDVANM  233 (281)
T ss_dssp             --CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHHHCSSSSCBCHHHHHHH
T ss_pred             --ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc-ccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence              256999999777665554    45689999999999999853110 0011122222223333345566666654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.95  E-value=1.8e-28  Score=184.99  Aligned_cols=150  Identities=20%  Similarity=0.270  Sum_probs=128.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|+||||+|+||++++++|+++|+  +|++++|++.+     ...+++++.+|++|.+++.+++  +|+|||||+....
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~   78 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIK   78 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHH
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeeccc
Confidence            4899999999999999999999998  99999998765     1237889999999998888877  9999999997543


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                      ...++.+.+++|+.++.++++++++. +.++||++||..+|+..                .+.|+.+|..+|.+++.   
T Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~----------------~~~y~~sK~~~e~~~~~---  138 (215)
T 2a35_A           79 EAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKS----------------SIFYNRVKGELEQALQE---  138 (215)
T ss_dssp             HHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHTT---
T ss_pred             cCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCCC----------------ccHHHHHHHHHHHHHHH---
Confidence            34567788999999999999999987 47899999999888531                15699999999988765   


Q ss_pred             cCCC-EEEEecCceecCCCC
Q 028444          159 EGLP-IVPVYPGVIYGPGKL  177 (209)
Q Consensus       159 ~~~~-~~~~rp~~v~g~~~~  177 (209)
                      .+++ ++++||+++|||...
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSC
T ss_pred             cCCCeEEEEeCceeeCCCCc
Confidence            4899 999999999999753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=1.8e-29  Score=197.58  Aligned_cols=161  Identities=20%  Similarity=0.148  Sum_probs=123.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+++++...  ..++.++++|++|.+++.++++       ++|+||||
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn  109 (272)
T 4dyv_A           30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNN  109 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            58999999999999999999999999999998654332111  1368899999999999888775       79999999


Q ss_pred             CccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-----ccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||...+       ..+++++.+++|+.++.++++++.+.+.     .++||++||...+.+..+              ..
T Consensus       110 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~--------------~~  175 (272)
T 4dyv_A          110 AGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY--------------SA  175 (272)
T ss_dssp             CCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT--------------CH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC--------------ch
Confidence            997432       2234677899999999999998876531     358999999876643221              14


Q ss_pred             hHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      .|+.+|++.+.+.+.    +.+++++++.++||++.+|..
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  215 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMA  215 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhh
Confidence            599999966666554    445689999999999999853

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.95  E-value=5.1e-29  Score=196.83  Aligned_cols=191  Identities=18%  Similarity=0.165  Sum_probs=138.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-C-----CCCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-L-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++|||||+|+||++++++|+++|++|++++|+..+..+ .     ....++.++++|++|++++.++++       ++|+
T Consensus        49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999997642110 0     011368999999999999887775       6899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||||...+       ..+++++.+++|+.++.++++++.+.+. .++||++||..++.+..+.              .
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~  194 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL--------------I  194 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC--------------H
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC--------------h
Confidence            9999996422       2245678899999999999999998753 3589999998877543222              4


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .|+.+|++.+.+.+.+    .++|+++++++||++++|...  ...-......+....+...+++++|+|++
T Consensus       195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  264 (291)
T 3ijr_A          195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIP--SSFDEKKVSQFGSNVPMQRPGQPYELAPA  264 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHH--HHSCHHHHHHTTTTSTTSSCBCGGGTHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccc--ccCCHHHHHHHHccCCCCCCcCHHHHHHH
Confidence            5999999776665554    456999999999999998421  00011122222333334456667777654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=8.7e-28  Score=189.14  Aligned_cols=172  Identities=18%  Similarity=0.089  Sum_probs=129.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-----------------CCCCceEEEEccCCCHHHHHHHhc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-----------------PSEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------------~~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.......                 ....++.++++|++|.+++.++++
T Consensus        12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   91 (287)
T 3pxx_A           12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELA   91 (287)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            699999999999999999999999999999874321100                 001368899999999999887775


Q ss_pred             -------CcCEEEEcCccCCC----CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCcc
Q 028444           65 -------GCHVIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        65 -------~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                             ++|+||||||....    ..+++++.+++|+.++.++++++.+.+. ..+||++||...+......+..+...
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  171 (287)
T 3pxx_A           92 NAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQ  171 (287)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----C
T ss_pred             HHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccC
Confidence                   78999999997532    2345678899999999999999998752 35899999987775432222222221


Q ss_pred             ccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          133 HEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                      .+   ....|+.+|++.+.+.+.+    .++|+++++++||+++++..
T Consensus       172 ~~---~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (287)
T 3pxx_A          172 GP---GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML  216 (287)
T ss_dssp             HH---HHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred             CC---ccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            11   2256999999666665554    45599999999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.3e-29  Score=199.21  Aligned_cols=193  Identities=17%  Similarity=0.163  Sum_probs=137.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.++++++    . ...++.++++|++|.+++..+++       ++|+|
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   89 (280)
T 3tox_A           10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTA   89 (280)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999986543221    1 12468899999999999887775       68999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeec-cCCccccCCCcccccccc
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALG-STDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~-~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....       ..+++++.+++|+.++.++++++.+.+   +..+||++||..++. +..+              
T Consensus        90 vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  155 (280)
T 3tox_A           90 FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG--------------  155 (280)
T ss_dssp             EECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT--------------
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC--------------
Confidence            999996422       224567889999999999999987642   346899999987662 2111              


Q ss_pred             CChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCC-cchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT-TGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|++.+.+.+.    +.++|+++++++||.+.+|.... ................+...+++++|+|++
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  230 (280)
T 3tox_A          156 VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEA  230 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHH
Confidence            24599999966655554    44568999999999999985321 000111222222333333445666776654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.95  E-value=1.7e-28  Score=189.15  Aligned_cols=155  Identities=18%  Similarity=0.215  Sum_probs=124.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHh-CCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-----CcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~vi~~a~~   75 (209)
                      +++||||+|+||++++++|++ .|++|++.+|+.....     ..+.++++|++|.+++.++++     ++|+||||||.
T Consensus         6 ~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~   80 (244)
T 4e4y_A            6 NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGI   80 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred             eEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            699999999999999999998 7899999988755211     268899999999999988875     68999999997


Q ss_pred             CCC------CCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      ...      ..+++++.+++|+.++.++++++.+.+.. .++|++||...+.+.++.              ..|+.+|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------~~Y~asKaa  146 (244)
T 4e4y_A           81 LIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNS--------------FAYTLSKGA  146 (244)
T ss_dssp             CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTB--------------HHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCC--------------chhHHHHHH
Confidence            422      22356678999999999999999887522 489999998776443221              359999996


Q ss_pred             HHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          149 ADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       149 ~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+.+.+.+    .++|+++++++||++++|.
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  177 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDL  177 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence            66665554    4569999999999999874

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.95  E-value=1.2e-29  Score=198.44  Aligned_cols=160  Identities=18%  Similarity=0.180  Sum_probs=124.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+++..     ..++.++.+|++|.+++.++++       ++|+|
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (270)
T 3ftp_A           30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVL  109 (270)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999997654322111     1357899999999999887775       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+..+.              .
T Consensus       110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~  175 (270)
T 3ftp_A          110 VNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ--------------V  175 (270)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB--------------H
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------------h
Confidence            999997432      224567789999999999999887542   34689999998776443221              4


Q ss_pred             hHHHHHHHHHH----HHHHHhhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|++.+.    +..++.++|+++++++||++.++.
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  214 (270)
T 3ftp_A          176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM  214 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcc
Confidence            59999995554    455555679999999999999873

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.95  E-value=5e-30  Score=192.62  Aligned_cols=157  Identities=19%  Similarity=0.217  Sum_probs=124.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHHhc---CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~   76 (209)
                      |+++||||+|+||++++++|+++  +|++++|+..+.+.+... .. .++.+|++|++++.++++   ++|+||||||..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            78999999999999999999988  999999976543221110 12 788999999999999887   899999999964


Q ss_pred             CC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      ..      ..+++.+.+++|+.++.++++++++. +.++||++||..+|.+..+              ...|+.+|.+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~a~~  142 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYVQVPG--------------FAAYAAAKGALE  142 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHHSSTT--------------BHHHHHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhccCCCC--------------cchHHHHHHHHH
Confidence            22      33456778999999999999999654 4579999999888754321              245999999888


Q ss_pred             HHHHHHh----hcCCCEEEEecCceecCC
Q 028444          151 KIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       151 ~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .+.+.++    ++|++++++|||+++|+.
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~  171 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGL  171 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence            7776654    358999999999999874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.95  E-value=2.3e-29  Score=197.67  Aligned_cols=193  Identities=15%  Similarity=0.087  Sum_probs=138.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..    . ...++.++++|++|.+++.++++       ++|+|
T Consensus        26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  105 (279)
T 3sju_A           26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGIL  105 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            699999999999999999999999999999986543221    1 12368999999999999877764       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc--C---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET--K---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.  +   +.++||++||...+.+..+              
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~--------------  171 (279)
T 3sju_A          106 VNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY--------------  171 (279)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC--------------
Confidence            999997432      22346678999999999999998762  1   3468999999876643222              


Q ss_pred             CChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCCCCCc--------chhHHHHHHHHhcCCceEEEEEEeeee
Q 028444          139 CTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT--------GNLVAKLVRLLFSQHFSLVFFHCQITC  206 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva  206 (209)
                      ...|+.+|++.+.+.+    ++.++|+++++++||++.+|.....        ..........+....+...+.+++|+|
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA  251 (279)
T 3sju_A          172 AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVA  251 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHH
Confidence            1459999995555554    4455689999999999998732100        001123333344444444566777777


Q ss_pred             ec
Q 028444          207 HA  208 (209)
Q Consensus       207 ~~  208 (209)
                      ++
T Consensus       252 ~~  253 (279)
T 3sju_A          252 GL  253 (279)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.95  E-value=6.6e-29  Score=193.30  Aligned_cols=162  Identities=23%  Similarity=0.230  Sum_probs=126.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+....  ..++.++++|++|.+++.++++       ++|+|||
T Consensus        13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~   92 (265)
T 2o23_A           13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN   92 (265)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            369999999999999999999999999999998765432111  1368999999999999988876       7999999


Q ss_pred             cCccCCC------------CCCCccchhhhHHHHHHHHHHHHHhcC---------CccEEEEEccceeeccCCccccCCC
Q 028444           72 TAALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADEN  130 (209)
Q Consensus        72 ~a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~ss~~~~~~~~~~~~~e~  130 (209)
                      |||....            ..+++.+.+++|+.++.++++++.+.+         +.++||++||..++.+..+      
T Consensus        93 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------  166 (265)
T 2o23_A           93 CAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG------  166 (265)
T ss_dssp             CCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT------
T ss_pred             CCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC------
Confidence            9997432            122456789999999999999987652         2468999999877654321      


Q ss_pred             ccccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          131 QVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       131 ~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                              ...|+.+|.+.+.+.+.    +.++++++++++||++.++..
T Consensus       167 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  208 (265)
T 2o23_A          167 --------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL  208 (265)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccc
Confidence                    14599999966665554    445689999999999999853

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=8.5e-29  Score=193.96  Aligned_cols=195  Identities=16%  Similarity=0.182  Sum_probs=139.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+.    +....++.++.+|++|.+++.++++       ++|+|
T Consensus        17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   96 (278)
T 2bgk_A           17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM   96 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            369999999999999999999999999999987543211    1111268999999999999988775       79999


Q ss_pred             EEcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....        ..+++++.+++|+.++.++++++.+.+   +.++||++||..+|.+...             +
T Consensus        97 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------~  163 (278)
T 2bgk_A           97 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-------------V  163 (278)
T ss_dssp             EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-------------S
T ss_pred             EECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC-------------C
Confidence            999996422        113456789999999999999987752   3469999999888754320             1


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHh--cCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLF--SQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|.+.+.+.+.++    ++|++++++|||+++|+...............+.  .......+++++|+|++
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (278)
T 2bgk_A          164 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADA  239 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHH
Confidence            1459999998887766654    4689999999999999864321110111111111  11223346778888765

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=4.2e-29  Score=193.34  Aligned_cols=188  Identities=19%  Similarity=0.124  Sum_probs=116.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.     ...++.++.+|++|.+++.++++       ++|+|
T Consensus        11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T 3qiv_A           11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYL   90 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999865433211     11368899999999999888775       78999


Q ss_pred             EEcCccCC---------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           70 FHTAALVE---------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        70 i~~a~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |||||...         ...+++++.+++|+.++.++++++.+.+   +.++||++||..+|..                
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  154 (253)
T 3qiv_A           91 VNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY----------------  154 (253)
T ss_dssp             EECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------
T ss_pred             EECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC----------------
Confidence            99999731         1223456789999999999988876542   3468999999887621                


Q ss_pred             cCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ...|+.+|++.+.+.+.++    ++++++++++||++++|.....  ....+......+.+...+.+++|+|++
T Consensus       155 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~  226 (253)
T 3qiv_A          155 -SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT--TPKEMVDDIVKGLPLSRMGTPDDLVGM  226 (253)
T ss_dssp             ------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------CCHHHHH
T ss_pred             -CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc--CcHHHHHHHhccCCCCCCCCHHHHHHH
Confidence             1349999997776666554    4589999999999999854211  112233334444455567788888765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.95  E-value=9.4e-28  Score=187.27  Aligned_cols=159  Identities=23%  Similarity=0.244  Sum_probs=126.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.... .++.++++|++|.+++.++++       ++|+||||||
T Consensus        18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg   96 (266)
T 3p19_A           18 LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAG   96 (266)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            69999999999999999999999999999998765544433 378999999999999887775       7899999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+.              ..|+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~--------------~~Y~as  162 (266)
T 3p19_A           97 MMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDH--------------AAYCGT  162 (266)
T ss_dssp             CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC--------------HHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCC--------------chHHHH
Confidence            7422      223456789999999999988876432   34799999998776433221              459999


Q ss_pred             HHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          146 KAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       146 K~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      |.+.+.+.+.    +.++|+++++++||++.++.
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  196 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTEL  196 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence            9966655544    45569999999999999984

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=3.1e-29  Score=194.96  Aligned_cols=161  Identities=16%  Similarity=0.166  Sum_probs=125.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-------CCceEEEEccCCCHHHHHHHhc------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACF------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+....       ..++.++.+|++|++++.++++      ++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid~   88 (260)
T 2z1n_A            9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADI   88 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCCE
Confidence            69999999999999999999999999999997643322110       1168899999999999988875      5999


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              .
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  154 (260)
T 2z1n_A           89 LVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD--------------L  154 (260)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------------C
Confidence            9999996422      223567789999999999998886532   3479999999877653221              1


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|...+.+.+.    +.++|+++++++||++++|..
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  195 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV  195 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence            4599999966665554    445689999999999999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.95  E-value=6.8e-29  Score=194.82  Aligned_cols=160  Identities=21%  Similarity=0.180  Sum_probs=125.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++++..  ..++.++++|++|.+++.++++       ++|+||||
T Consensus        29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  108 (277)
T 4dqx_A           29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNN  108 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999998654332111  1368899999999999887775       68999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|+
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  174 (277)
T 4dqx_A          109 AGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD--------------RTAYV  174 (277)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC--------------ChhHH
Confidence            996422      223566789999999999999987643   2358999999877643322              14599


Q ss_pred             HHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|++.+.+.+.    +.++|+++++++||++.+|.
T Consensus       175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence            999966665554    45568999999999999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.95  E-value=9.2e-29  Score=193.66  Aligned_cols=161  Identities=19%  Similarity=0.188  Sum_probs=123.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHh--------cCcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDAC--------FGCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~--------~~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+++++..     ...++.++++|++|++++.+++        .++|+
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~  102 (273)
T 1ae1_A           23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNI  102 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCE
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcE
Confidence            6999999999999999999999999999999865332210     1136889999999999987776        46899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.++              .
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  168 (273)
T 1ae1_A          103 LVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS--------------V  168 (273)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT--------------C
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC--------------c
Confidence            9999997422      223466789999999999999886532   3479999999887754321              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|++.+.+.+.+    .++|+++++++||++++|..
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  209 (273)
T 1ae1_A          169 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV  209 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchh
Confidence            45999999776665554    45699999999999999853

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.95  E-value=8.9e-29  Score=192.91  Aligned_cols=191  Identities=12%  Similarity=0.055  Sum_probs=136.5

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+  |+||++++++|+++|++|++++|+. +.++    +.. .....++++|++|++++.++++       ++|
T Consensus        11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   89 (265)
T 1qsg_A           11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD   89 (265)
T ss_dssp             EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            59999999  9999999999999999999999986 2111    100 0234789999999999888775       689


Q ss_pred             EEEEcCccCC-----------CCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccc
Q 028444           68 VIFHTAALVE-----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        68 ~vi~~a~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      +||||||...           ...+++++.+++|+.++.++++++.+.+. .++||++||...+.+.++           
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  158 (265)
T 1qsg_A           90 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN-----------  158 (265)
T ss_dssp             EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred             EEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC-----------
Confidence            9999999753           22235667899999999999999988742 258999999776543211           


Q ss_pred             cccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                         ...|+.+|++.+.+.+.++    ++|+++++++||++++|...... ........+..+.+...+++++|+|++
T Consensus       159 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dva~~  231 (265)
T 1qsg_A          159 ---YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTPIRRTVTIEDVGNS  231 (265)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-ccHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence               2459999997777766554    45899999999999998542111 122222222222222345667777654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.95  E-value=2.9e-29  Score=196.30  Aligned_cols=190  Identities=16%  Similarity=0.110  Sum_probs=138.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.++.++..     ...++.++++|++|.+++.++++       ++|+|
T Consensus        28 ~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (271)
T 4ibo_A           28 TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDIL  107 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            6999999999999999999999999999998765432211     11368899999999999888775       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ..
T Consensus       108 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~--------------~~  173 (271)
T 4ibo_A          108 VNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT--------------VA  173 (271)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT--------------CH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC--------------ch
Confidence            999997422      234567789999999999999887653   3468999999766543221              14


Q ss_pred             hHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhH--HHHHHHHhcCCceEEEEEEeeeeec
Q 028444          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLV--AKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .|+.+|++.+.+.+.    +.++|+++++++||+++++...   ...  ...........+...+.+++|+|++
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~p~~r~~~pedva~~  244 (271)
T 4ibo_A          174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ---ALIDNPEFDAWVKARTPAKRWGKPQELVGT  244 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH---HHHHCHHHHHHHHHHSTTCSCBCGGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh---hcccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            599999966655554    4556999999999999998531   111  1222333333444456777887764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=2.7e-29  Score=193.85  Aligned_cols=162  Identities=18%  Similarity=0.192  Sum_probs=124.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|++++| +.++.+++.     ...++.++++|++|++++.++++       ++|
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            37999999999999999999999999999998 443322110     01368899999999999888775       699


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+.++              
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  150 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG--------------  150 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC--------------
Confidence            99999997432      223566789999999999998876532   3479999999876543211              


Q ss_pred             CChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ...|+.+|...+.+.    .++.++|+++++++||++.++..
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  192 (246)
T 2uvd_A          151 QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMT  192 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcch
Confidence            145999999655554    44556799999999999998853

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.95  E-value=4.8e-28  Score=188.74  Aligned_cols=154  Identities=21%  Similarity=0.178  Sum_probs=124.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++      ..++.++++|++|.+++.++++       ++|+|||||
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A   82 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA   82 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            369999999999999999999999999999998654      1268899999999999887775       699999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  148 (264)
T 2dtx_A           83 GIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN--------------ASAYVT  148 (264)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT--------------BHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC--------------chhHHH
Confidence            96432      223567789999999999999987653   3469999999877643221              145999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      +|.+.+.+.+.++    +. +++++++||++.++.
T Consensus       149 sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~  182 (264)
T 2dtx_A          149 SKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPL  182 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcc
Confidence            9998777766654    34 999999999998873

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=8.5e-29  Score=192.57  Aligned_cols=160  Identities=18%  Similarity=0.159  Sum_probs=123.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.++..+.....++.++.+|++|.+++.++++       ++|+||||||
T Consensus        29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg  108 (260)
T 3gem_A           29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNAS  108 (260)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            599999999999999999999999999999987543211111257899999999999887774       6899999999


Q ss_pred             cCCCC-----CCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           75 LVEPW-----LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        75 ~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      .....     .+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+.              ..|+.+|
T Consensus       109 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------------~~Y~asK  174 (260)
T 3gem_A          109 EWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH--------------IAYCATK  174 (260)
T ss_dssp             CCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC--------------HHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc--------------HhHHHHH
Confidence            74321     12355789999999999999987642   34689999998776443221              4599999


Q ss_pred             HHHHHHHHHHhh---cCCCEEEEecCceecCC
Q 028444          147 AVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       147 ~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      ++.+.+.+.++.   .++++++++||.+.++.
T Consensus       175 aa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~  206 (260)
T 3gem_A          175 AGLESLTLSFAARFAPLVKVNGIAPALLMFQP  206 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence            977766665542   16999999999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.95  E-value=3.8e-29  Score=194.59  Aligned_cols=192  Identities=16%  Similarity=0.077  Sum_probs=135.8

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCC---CCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+  |+||++++++|+++|++|++++|+.+   ..+++.. ..++.++++|++|.+++.++++       ++|+
T Consensus        10 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   89 (261)
T 2wyu_A           10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDY   89 (261)
T ss_dssp             EEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999  99999999999999999999999753   1111111 1247889999999999887775       6899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||||....          ..+++++.+++|+.++.++++++.+.+. .++||++||..++.+.++             
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  156 (261)
T 2wyu_A           90 LVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-------------  156 (261)
T ss_dssp             EEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT-------------
T ss_pred             EEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC-------------
Confidence            9999996431          2235667899999999999999988642 258999999766543211             


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ...|+.+|++.+.+.+.+    .++|+++++++||++++|...... ........+....+...+.+++|+|++
T Consensus       157 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dva~~  229 (261)
T 2wyu_A          157 -YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPLRRNITQEEVGNL  229 (261)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence             135999999777666554    445999999999999998532111 112222222222222345566776654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.95  E-value=1e-28  Score=192.11  Aligned_cols=194  Identities=16%  Similarity=0.095  Sum_probs=138.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHh--------cCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDAC--------FGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~--------~~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+...     ...++.++++|++|++++.+++        .++|
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            36999999999999999999999999999999765432211     0136889999999999988776        4699


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.++              
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  155 (260)
T 2ae2_A           90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY--------------  155 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT--------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------
Confidence            99999996422      223566789999999999999986532   3579999999876543211              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC--cchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|...+.+.+.++    ++++++++++||.+++|....  ........+..+....+...+++++|+|++
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  231 (260)
T 2ae2_A          156 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAM  231 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            1459999998777766654    458999999999999873210  001111111123333333456778887764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.95  E-value=1.1e-28  Score=190.01  Aligned_cols=189  Identities=20%  Similarity=0.194  Sum_probs=138.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~~   77 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.. ..+.+++++|++|.+++.++++   ++|+||||||...
T Consensus         9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~   88 (244)
T 3d3w_A            9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCC
Confidence            69999999999999999999999999999997654322111 1256788999999999999886   5899999999643


Q ss_pred             C------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      .      ..+++++.+++|+.++.++++++.+.+   + .++||++||..++.+..+              ...|+.+|.
T Consensus        89 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~  154 (244)
T 3d3w_A           89 LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------------HSVYCSTKG  154 (244)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------BHHHHHHHH
T ss_pred             CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC--------------CchHHHHHH
Confidence            2      123456789999999999999887642   2 478999999876643211              145999999


Q ss_pred             HHHHHHHHHh----hcCCCEEEEecCceecCCCC---CcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          148 VADKIALQAA----SEGLPIVPVYPGVIYGPGKL---TTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       148 ~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +.+.+.+.++    ++++++++++||+++|+...   .....    ...+..+.+...+++++|+|++
T Consensus       155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~dva~~  218 (244)
T 3d3w_A          155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK----AKTMLNRIPLGKFAEVEHVVNA  218 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTH----HHHHHHTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHH----HHHHHhhCCCCCCcCHHHHHHH
Confidence            8888776654    35899999999999998531   11111    1222233333456778888765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.95  E-value=6e-29  Score=194.75  Aligned_cols=192  Identities=15%  Similarity=0.167  Sum_probs=136.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC---CC-CCCCceEEEEccCCCHHHHHHHhc------CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GL-PSEGALELVYGDVTDYRSLVDACF------GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~---~~-~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++|+....+   ++ ....++.++++|++|.+++.++.+      ++|+|||
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~  112 (273)
T 3uf0_A           33 TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVN  112 (273)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEE
Confidence            6999999999999999999999999999997632110   01 111368999999999998877653      6999999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|
T Consensus       113 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--------------~~~Y  178 (273)
T 3uf0_A          113 NAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN--------------VAAY  178 (273)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------------CHHH
T ss_pred             CCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC--------------ChhH
Confidence            9997532      224567789999999999999886532   3478999999877643322              1459


Q ss_pred             HHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          143 ERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       143 ~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +.+|++.+.+.+.    +.++|+++++++||++++|..... .........+....+...+.+++|+|++
T Consensus       179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p~~r~~~pedva~~  247 (273)
T 3uf0_A          179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL-RADDERAAEITARIPAGRWATPEDMVGP  247 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTSHHHHHHHHHHSTTSSCBCGGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc-ccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            9999966665554    445699999999999999853110 0011222222333333456677787765

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=9.9e-29  Score=191.93  Aligned_cols=161  Identities=21%  Similarity=0.211  Sum_probs=125.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CCCC----C-CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGL----P-SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++  ++..    . ...++.++++|++|.+++.++++       ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            379999999999999999999999999999998654  2211    0 11368899999999999887775       79


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---Cc-cEEEEEccceeeccCCccccCCCcccccc
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV-EKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      |+||||||....      ..+++++.+++|+.++.++++++.+.+   +. ++||++||...+.+...            
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  150 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI------------  150 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC------------
Confidence            999999997432      223566789999999999999987642   34 79999999876543211            


Q ss_pred             ccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          137 YFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                        ...|+.+|.+.+.+.+.+    .++++++++++||++.++.
T Consensus       151 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (258)
T 3a28_C          151 --LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM  191 (258)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence              145999999776665544    4568999999999998873

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=1.3e-28  Score=189.75  Aligned_cols=191  Identities=16%  Similarity=0.134  Sum_probs=128.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEE-cCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|++++ |++++.+...     ...++.++.+|++|.+++.++++       ++|
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3799999999999999999999999999994 5544322110     11368899999999999888775       789


Q ss_pred             EEEEcCccCC------CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||...      ...+++++.+++|+.++.++++++.+.+   +.++||++||...+.+.+.              
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  151 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG--------------  151 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------
Confidence            9999999742      1345678899999999999999887532   3579999999754322111              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|.+.+.+.+.++    +.++++++++||++.++......   .........+.+...+++++|+|++
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~  222 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP---DKVKEMYLNNIPLKRFGTPEEVANV  222 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc---hHHHHHHHhhCCCCCCCCHHHHHHH
Confidence            1459999997777666553    45899999999999987321111   1122223333333456777887764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.95  E-value=4.3e-29  Score=194.15  Aligned_cols=162  Identities=15%  Similarity=0.125  Sum_probs=124.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCCC------CCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPS------EGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++ .+.+.+      ..++.++.+|++|.+++.++++       ++
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            379999999999999999999999999999998654 322110      1268899999999999887775       68


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+             
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  151 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN-------------  151 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC-------------
Confidence            999999996432      223567789999999999999987542   3479999999877643211             


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                       ...|+.+|...+.+.+.+    .++|+++++++||++++|..
T Consensus       152 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  193 (260)
T 1x1t_A          152 -KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV  193 (260)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             -CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchH
Confidence             145999999777666554    44589999999999999853

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=5.9e-28  Score=188.54  Aligned_cols=190  Identities=16%  Similarity=0.070  Sum_probs=135.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...      ...++.++.+|++|.+++.++++       ++|+
T Consensus        23 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  102 (267)
T 1vl8_A           23 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT  102 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999999999864332110      01257889999999999887765       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccce-eeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFF-ALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~-~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||.. .+.+..              .
T Consensus       103 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  168 (267)
T 1vl8_A          103 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP--------------N  168 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS--------------S
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCC--------------C
Confidence            9999997432      123456789999999999999886532   346999999976 332211              1


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhH--HHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLV--AKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|++.+.+.+.+    .++|+++++++||++.++...   ...  ......+....+...+++++|+|++
T Consensus       169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  241 (267)
T 1vl8_A          169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE---AVFSDPEKLDYMLKRIPLGRTGVPEDLKGV  241 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH---HHHTCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc---ccccChHHHHHHHhhCCCCCCcCHHHHHHH
Confidence            245999999777666554    446999999999999998531   111  1222222222233346677887764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=2.3e-29  Score=197.45  Aligned_cols=159  Identities=14%  Similarity=0.123  Sum_probs=124.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++..+..      ...++.++++|++|.+++.++++       ++|+
T Consensus        29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  108 (277)
T 4fc7_A           29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDI  108 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999999999865322110      01368999999999999887765       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+....              
T Consensus       109 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  174 (277)
T 4fc7_A          109 LINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQ--------------  174 (277)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTC--------------
T ss_pred             EEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCc--------------
Confidence            9999996322      234567889999999999999987543   23689999998776443222              


Q ss_pred             ChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecC
Q 028444          140 TQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|++.+.+.+    ++.++|+++++++||+++++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  213 (277)
T 4fc7_A          175 VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT  213 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence            459999996665554    45556999999999999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=2.4e-29  Score=193.58  Aligned_cols=191  Identities=19%  Similarity=0.135  Sum_probs=135.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|+++ .|+.++.+.+..     ..++.++++|++|.+++.++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999999999999995 676443221110     1368899999999999988775       689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  147 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG--------------  147 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC--------------
Confidence            99999997532      223456789999999999999987642   3579999999866543211              


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|.+.+.+.+.+    .+.++++++++||++++|.....   ............+...+++++|+|++
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~  218 (244)
T 1edo_A          148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIPLGRTGQPENVAGL  218 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCTTCSCBCHHHHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcCCCCCCCCHHHHHHH
Confidence            145999999776665554    34589999999999998743111   11222222222223345677777654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.95  E-value=2e-29  Score=195.91  Aligned_cols=192  Identities=15%  Similarity=0.030  Sum_probs=135.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++|||||+|+||++++++|+++|++|+++ .|+.++.++..     ...++.++++|++|.+++.++++       ++|+
T Consensus         6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (258)
T 3oid_A            6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDV   85 (258)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999997 66644322110     11368999999999999887775       5799


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+..+              .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  151 (258)
T 3oid_A           86 FVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN--------------Y  151 (258)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT--------------C
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC--------------c
Confidence            9999996321      223466789999999999999986542   3468999999876643221              2


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|++.+.+.+.+    .++++++++++||++.++....... ............+...+++++|+|++
T Consensus       152 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~  223 (258)
T 3oid_A          152 TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTPAGRMVEIKDMVDT  223 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            45999999777666554    4558999999999999984321111 11222222323333445666666654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=5.2e-29  Score=192.01  Aligned_cols=190  Identities=17%  Similarity=0.113  Sum_probs=136.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.      ...++.++.+|++|.+++.++++       ++|+
T Consensus         9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   88 (248)
T 2pnf_A            9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDI   88 (248)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999999999764332111      01268899999999999988875       7999


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++.+.+++|+.++.++++++.+.+   +.++||++||..++.+..+              .
T Consensus        89 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  154 (248)
T 2pnf_A           89 LVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG--------------Q  154 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC--------------C
Confidence            9999997432      223456789999999998888775431   3579999999765533211              1


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|.+.+.+.+.++    +.++++++++||++++|......   ...........+...+++++|+|++
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~  224 (248)
T 2pnf_A          155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---EEIKQKYKEQIPLGRFGSPEEVANV  224 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHHHHHHTCTTSSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---HHHHHHHHhcCCCCCccCHHHHHHH
Confidence            459999997777666553    45899999999999998542111   1111222222233346777887764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.95  E-value=1.5e-28  Score=191.00  Aligned_cols=160  Identities=16%  Similarity=0.096  Sum_probs=125.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.++..     ...++.++.+|++|.+++.++++       ++|+|
T Consensus        16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   95 (260)
T 2zat_A           16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDIL   95 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999764332110     11358889999999998877765       79999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....       ..+++++.+++|+.++.++++++.+.+   +.++||++||..+|.+..+              .
T Consensus        96 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  161 (260)
T 2zat_A           96 VSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN--------------L  161 (260)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC--------------c
Confidence            999996421       223466789999999999999886532   3578999999887753221              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|...+.+.+.+    .++|+++++++||+++++.
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  201 (260)
T 2zat_A          162 GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF  201 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence            45999999776666554    4568999999999999985

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.95  E-value=4.8e-28  Score=186.94  Aligned_cols=154  Identities=24%  Similarity=0.232  Sum_probs=119.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+      ..+++|++|++++.++++       ++|+||||||
T Consensus        17 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag   90 (247)
T 1uzm_A           17 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   90 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh------cCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999987654332      248899999998877764       5899999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ...|+.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~s  156 (247)
T 1uzm_A           91 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN--------------QANYAAS  156 (247)
T ss_dssp             CCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C--------------CHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCC--------------ChhHHHH
Confidence            7422      223567789999999999999887632   3579999999866533211              1459999


Q ss_pred             HHHHHHHHH----HHhhcCCCEEEEecCceecCC
Q 028444          146 KAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       146 K~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      |.+.+.+.+    ++.++|+++++++||++.++.
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  190 (247)
T 1uzm_A          157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDM  190 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccc
Confidence            996555544    445569999999999998863

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.95  E-value=2.9e-29  Score=195.83  Aligned_cols=160  Identities=19%  Similarity=0.169  Sum_probs=125.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++...      ...++.++++|++|.+++.++++       ++|+
T Consensus        22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  101 (266)
T 4egf_A           22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDV  101 (266)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999999999765432211      11368999999999998877765       7899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+    ...+||++||...+.+..+              
T Consensus       102 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  167 (266)
T 4egf_A          102 LVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--------------  167 (266)
T ss_dssp             EEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC--------------
Confidence            9999997532      223466789999999999999987643    1358999999877643222              


Q ss_pred             CChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|++.+.+.+    ++.++|+++++++||++++|.
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  208 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEM  208 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCch
Confidence            1459999996665554    455569999999999999873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=3.7e-29  Score=194.93  Aligned_cols=161  Identities=24%  Similarity=0.276  Sum_probs=125.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.+++++..+  ..++.++++|++|.+++.++++       ++|+|||
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvn   86 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAH   86 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            369999999999999999999999999999998654322111  0368899999999999887765       5799999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |||....      ..+++++.+++|+.++.++++++.+.+. .++||++||..++ +..+              ...|+.
T Consensus        87 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~--------------~~~Y~a  151 (263)
T 2a4k_A           87 FAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG--------------LAHYAA  151 (263)
T ss_dssp             GGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH--------------HHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC--------------cHHHHH
Confidence            9997432      1234567899999999999999988652 3689999998776 2111              145999


Q ss_pred             HHHHHHHH----HHHHhhcCCCEEEEecCceecCCC
Q 028444          145 SKAVADKI----ALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       145 sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +|...+.+    ..++.++|+++++++||+++++..
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  187 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT  187 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchh
Confidence            99955544    445556699999999999999853

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=1.6e-28  Score=192.93  Aligned_cols=161  Identities=17%  Similarity=0.100  Sum_probs=124.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-------------CC-----CCCCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------------GL-----PSEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-------------~~-----~~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      +++||||+|+||++++++|+++|++|++++|+.....             +.     ....++.++++|++|.+++.+++
T Consensus        17 ~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   96 (280)
T 3pgx_A           17 VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELV   96 (280)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            6999999999999999999999999999998532110             00     01136889999999999988877


Q ss_pred             c-------CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccc
Q 028444           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYI  126 (209)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~  126 (209)
                      +       ++|+||||||....      ..+++++.+++|+.++.++++++.+.+    ...+||++||..++.+..+. 
T Consensus        97 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  175 (280)
T 3pgx_A           97 ADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGN-  175 (280)
T ss_dssp             HHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCc-
Confidence            5       68999999997532      234567789999999999999986542    24689999998776433221 


Q ss_pred             cCCCccccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          127 ADENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                                   ..|+.+|++.+.+.+.    +.++|+++++++||++++|..
T Consensus       176 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  216 (280)
T 3pgx_A          176 -------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI  216 (280)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCccc
Confidence                         4599999966665554    445799999999999999864

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.95  E-value=4.9e-29  Score=193.46  Aligned_cols=160  Identities=24%  Similarity=0.250  Sum_probs=124.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.     ...++.++++|++|.+++.++++       ++|+|
T Consensus         4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (256)
T 1geg_A            4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   83 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999999765332211     01358899999999999888775       79999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.+   + .++||++||...+.+.+.              .
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  149 (256)
T 1geg_A           84 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE--------------L  149 (256)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC--------------c
Confidence            999996422      223466789999999999999887643   2 468999999866533211              1


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|...+.+.+.    +.++|+++++++||++++|.
T Consensus       150 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  189 (256)
T 1geg_A          150 AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM  189 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch
Confidence            4599999966665554    44569999999999999874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=5.8e-29  Score=195.49  Aligned_cols=161  Identities=18%  Similarity=0.180  Sum_probs=117.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+. ++.+...     ...++.++++|++|.+++.++++       ++|+
T Consensus        31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            599999999999999999999999999999643 2211110     11368999999999999887775       7899


Q ss_pred             EEEcCccCC--C------CCCCccchhhhHHHHHHHHHHHHHhcC---C---ccEEEEEccceeeccCCccccCCCcccc
Q 028444           69 IFHTAALVE--P------WLPDPSRFFAVNVEGLKNVVQAAKETK---T---VEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        69 vi~~a~~~~--~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~---~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      ||||||...  .      ..+++++.+++|+.++.++++++.+.+   +   ..+||++||...+.+..+.         
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~---------  181 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER---------  181 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC---------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc---------
Confidence            999999731  1      234567889999999999999987653   1   3589999998776432221         


Q ss_pred             ccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          135 EKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                           ..|+.+|++.+.+.+.+    .++|+++++++||++.+|..
T Consensus       182 -----~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  222 (280)
T 4da9_A          182 -----LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT  222 (280)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCch
Confidence                 35999999766665554    45689999999999999854

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.95  E-value=1.1e-28  Score=191.42  Aligned_cols=191  Identities=15%  Similarity=0.134  Sum_probs=138.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC--CCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.  +++.. ..++.++.+|++|.+++.++++       ++|+||
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   84 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILV   84 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4799999999999999999999999999999976410  01111 1358889999999999988876       799999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.++              ...
T Consensus        85 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  150 (255)
T 2q2v_A           85 NNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG--------------KAA  150 (255)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------BHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC--------------chh
Confidence            99996432      223566789999999999988875432   3579999999877643221              145


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhH---HHH-------HHHH-hcCCceEEEEEEeeee
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV---AKL-------VRLL-FSQHFSLVFFHCQITC  206 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~---~~~-------~~~~-~~~~~~~~~~~~~dva  206 (209)
                      |+.+|...+.+.+.++    ++|+++++++||++++|...   ...   ...       ...+ ....+...+++++|+|
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  227 (255)
T 2q2v_A          151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ---KQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLG  227 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH---HHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh---hhcccccccccchHHHHHHHHhccCCCCCCcCHHHHH
Confidence            9999997777666554    45899999999999998421   111   111       1222 3333445678889988


Q ss_pred             ec
Q 028444          207 HA  208 (209)
Q Consensus       207 ~~  208 (209)
                      ++
T Consensus       228 ~~  229 (255)
T 2q2v_A          228 EL  229 (255)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=8.7e-29  Score=194.10  Aligned_cols=160  Identities=16%  Similarity=0.181  Sum_probs=124.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.++    +....++.++.+|++|.+++.++++       ++|+||
T Consensus        31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  110 (276)
T 2b4q_A           31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILV  110 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            69999999999999999999999999999997643221    1111268889999999999887765       689999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---Cc----cEEEEEccceeeccCCccccCCCccccccc
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV----EKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~----~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||....      ..+++++.+++|+.++.++++++.+.+   +.    ++||++||..++.+....            
T Consensus       111 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~------------  178 (276)
T 2b4q_A          111 NNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ------------  178 (276)
T ss_dssp             ECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCS------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCC------------
Confidence            99996422      223466789999999999999886532   22    789999998776432211            


Q ss_pred             cCC-hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          138 FCT-QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~-~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                        . .|+.+|.+.+.+.+.+    .++|+++++++||++.++.
T Consensus       179 --~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~  219 (276)
T 2b4q_A          179 --AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM  219 (276)
T ss_dssp             --CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred             --ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence              2 5999999777666554    4568999999999999985

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.95  E-value=1.2e-28  Score=192.70  Aligned_cols=161  Identities=22%  Similarity=0.213  Sum_probs=124.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.. ..+.+.     ...++.++++|++|.+++.++++       ++|+
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999988532 211110     11368899999999999888775       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+.              
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  175 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ--------------  175 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTC--------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCc--------------
Confidence            9999997532      234567789999999999999986542   34699999998766443221              


Q ss_pred             ChHHHHHHHHHH----HHHHHhhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|++.+.    +..++.++|+++++++||++++|..
T Consensus       176 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (269)
T 4dmm_A          176 ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT  216 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccc
Confidence            459999995554    4555556799999999999999854

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=9.3e-29  Score=191.34  Aligned_cols=194  Identities=18%  Similarity=0.172  Sum_probs=136.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCce-EEEEccCCCHHHHHHHh------cCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGAL-ELVYGDVTDYRSLVDAC------FGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~-~~~~~Dl~~~~~~~~~~------~~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+....  ..++ .++.+|++|.+++.+++      .++|+||||
T Consensus        13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~   92 (254)
T 2wsb_A           13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNS   92 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEEC
Confidence            69999999999999999999999999999997653322111  0245 88999999999988776      478999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.+..            +...|+
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------~~~~Y~  160 (254)
T 2wsb_A           93 AGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ------------FASSYM  160 (254)
T ss_dssp             CCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS------------CBHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC------------cchHHH
Confidence            997432      112356789999999999988875431   35799999998776432211            114599


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       144 ~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+|.+.+.+.+.++    +++++++++|||+++||...... ........+....+...+++++|+|++
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~  228 (254)
T 2wsb_A          161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-ERPELFETWLDMTPMGRCGEPSEIAAA  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-TCHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-cChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            99998887776654    35899999999999997421000 001222233333333346677777764

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.95  E-value=9.7e-28  Score=186.24  Aligned_cols=155  Identities=18%  Similarity=0.165  Sum_probs=122.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      ++|||||+++||++++++|+++|++|++.+|+..+.  ..   ...++++|++|++++..+++       ++|++|||||
T Consensus        13 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG   87 (261)
T 4h15_A           13 RALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LP---EELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLG   87 (261)
T ss_dssp             EEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SC---TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCC
T ss_pred             EEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CC---cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999975432  11   34578999999998877664       5899999999


Q ss_pred             cCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           75 LVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        75 ~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ....        ..++|++.+++|+.++.++++++.+.+   +..++|++||...+.+.+..             ...|+
T Consensus        88 ~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~-------------~~~Y~  154 (261)
T 4h15_A           88 GSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES-------------TTAYA  154 (261)
T ss_dssp             CCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT-------------CHHHH
T ss_pred             CCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc-------------cHHHH
Confidence            6321        224577889999999999999887653   34689999997654322100             13499


Q ss_pred             HHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       144 ~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      .+|+    +++.+..+++++|++++++.||++.+|
T Consensus       155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~  189 (261)
T 4h15_A          155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETE  189 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc
Confidence            9999    566677777788999999999999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-28  Score=190.76  Aligned_cols=157  Identities=22%  Similarity=0.259  Sum_probs=122.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++ ++.... .. .++++|++|.+++.++++       ++|+|||||
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~A   85 (256)
T 2d1y_A            8 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNA   85 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            69999999999999999999999999999998654 221110 13 788999999998877764       689999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+.++              ...|+.
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  151 (256)
T 2d1y_A           86 AIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE--------------NAAYNA  151 (256)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT--------------BHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC--------------ChhHHH
Confidence            97432      123456789999999999999887642   3579999999876543211              145999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      +|+..+.+.+.+    .++++++++++||++.++
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  185 (256)
T 2d1y_A          152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE  185 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCc
Confidence            999777666554    456899999999999986

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=1.2e-28  Score=195.50  Aligned_cols=192  Identities=11%  Similarity=0.066  Sum_probs=136.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+....      ..++.++++|++|.+++.++++       ++|
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999998653321100      1368999999999999887765       469


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||||....      ..+++.+.+++|+.++.++++++.+.+    +.++||++||..++.+..+             
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  173 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF-------------  173 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT-------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC-------------
Confidence            99999996422      223466789999999999999886542    3468999999876643221             


Q ss_pred             cCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC--cchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ...|+.+|++.+.+.+.++    ++|+++++++||++++++...  .....  ....+..+.+...+++++|+|++
T Consensus       174 -~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~dva~~  247 (302)
T 1w6u_A          174 -VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FEKEMIGRIPCGRLGTVEELANL  247 (302)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             -cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hHHHHHhcCCcCCCCCHHHHHHH
Confidence             1459999998887776654    368999999999999973211  01111  11122333333456677887764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=8.9e-29  Score=192.66  Aligned_cols=163  Identities=18%  Similarity=0.173  Sum_probs=122.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-----CCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+..+     ... ..++.++++|++|.+++.++++       ++|+
T Consensus         9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A            9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            59999999999999999999999999999887532110     000 1368999999999999888775       7899


Q ss_pred             EEEcCcc--CCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAAL--VEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~--~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||||.  ...      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+......            
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~------------  156 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI------------  156 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCT------------
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCC------------
Confidence            9999994  211      223456789999999999999985432   34789999987544221111            


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +...|+.+|++.+.+.+.+    .++|+++++++||++++|..
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  199 (264)
T 3i4f_A          157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMK  199 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccc
Confidence            1246999999766665544    45689999999999999854

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.95  E-value=1.2e-28  Score=191.46  Aligned_cols=191  Identities=18%  Similarity=0.131  Sum_probs=134.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|++++| +.++.+.+.     ...++.++.+|++|.+++.++++       ++|
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            37999999999999999999999999999999 543221110     01368899999999999887775       789


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---C-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+   + .++||++||...+.+..              
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------  153 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP--------------  153 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC--------------
Confidence            99999997432      223456789999999999999887642   2 46999999976553221              


Q ss_pred             cCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCcchhH--HHHHHHHhcCCceEEEEEEeeeeec
Q 028444          138 FCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLV--AKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +...|+.+|.+.+.+.+.    +.++++++++++||+++||...   ...  ......+....+...+++++|+|++
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  227 (261)
T 1gee_A          154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA---EKFADPEQRADVESMIPMGYIGEPEEIAAV  227 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH---HHHHSHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh---hcccChhHHHHHHhcCCCCCCcCHHHHHHH
Confidence            124599999866655544    4456899999999999998531   110  1222222222222345677777654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.95  E-value=1.8e-28  Score=187.38  Aligned_cols=161  Identities=16%  Similarity=0.132  Sum_probs=122.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhcCc----CEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACFGC----HVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~----d~vi~~a~   74 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++....  ..++.++.+|++|.+++.++++.+    |+||||||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            149999999999999999999999999999998654332111  136889999999999999988654    89999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ....      ..+++++.+++|+.++.++++++.+.+.  ..++|++||...+.+....              ..|+.+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------------~~Y~asK  147 (230)
T 3guy_A           82 SGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE--------------STYCAVK  147 (230)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC--------------HHHHHHH
T ss_pred             cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC--------------chhHHHH
Confidence            6422      2234667899999999999999987532  2389999998776432211              4599999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          147 AVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       147 ~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ++.+.+.+.++    ++|++++.++||.+.++.
T Consensus       148 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  180 (230)
T 3guy_A          148 WAVKGLIESVRLELKGKPMKIIAVYPGGMATEF  180 (230)
T ss_dssp             HHHHHHHHHHHHHTTTSSCEEEEEEECCC----
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEECCcccChH
Confidence            97776666554    458999999999999873

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.6e-28  Score=193.07  Aligned_cols=161  Identities=18%  Similarity=0.208  Sum_probs=122.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCC----C--CCCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----L--PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~----~--~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++|||||+|+||++++++|+++|++|++++|+. +..+.    +  ....++.++++|++|.+++.++++       ++|
T Consensus        27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            699999999999999999999999999999843 22111    0  012368999999999999888775       689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+....             
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  173 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFK-------------  173 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCc-------------
Confidence            99999997422      224567789999999999999985432   34689999998766433211             


Q ss_pred             CChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                       ..|+.+|++.+.+.+.    +.++|+++++++||++++|..
T Consensus       174 -~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  214 (281)
T 3v2h_A          174 -SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLV  214 (281)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred             -hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcch
Confidence             4599999966655544    455689999999999999853

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=2.9e-27  Score=186.70  Aligned_cols=174  Identities=17%  Similarity=0.148  Sum_probs=132.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc---CcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~   75 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+....  ..++.++++|++|.+++.++++   ++|+||||||.
T Consensus        17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~   96 (291)
T 3rd5_A           17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGI   96 (291)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcC
Confidence            369999999999999999999999999999998654332111  1378999999999999999887   57999999997


Q ss_pred             CCC----CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           76 VEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        76 ~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      ..+    ..+++++.+++|+.++.++++++.+.+ .++||++||...+........ ......+..+...|+.||++.+.
T Consensus        97 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~-~~~~~~~~~~~~~Y~~sK~a~~~  174 (291)
T 3rd5_A           97 MAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLED-LNWRSRRYSPWLAYSQSKLANLL  174 (291)
T ss_dssp             CSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSC-TTCSSSCCCHHHHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCccc-ccccccCCCCcchHHHHHHHHHH
Confidence            532    346788899999999999999999986 569999999887754221100 00000111223569999997666


Q ss_pred             HHHHH----hhcC--CCEEEEecCceecCCC
Q 028444          152 IALQA----ASEG--LPIVPVYPGVIYGPGK  176 (209)
Q Consensus       152 ~~~~~----~~~~--~~~~~~rp~~v~g~~~  176 (209)
                      +.+.+    .+++  +++++++||++.++..
T Consensus       175 ~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~  205 (291)
T 3rd5_A          175 FTSELQRRLTAAGSPLRALAAHPGYSHTNLQ  205 (291)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECCSGGGSCC-
T ss_pred             HHHHHHHHHhhCCCCEEEEEeeCCCCccccc
Confidence            65554    4456  9999999999998753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.95  E-value=8.9e-29  Score=194.15  Aligned_cols=160  Identities=18%  Similarity=0.115  Sum_probs=124.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...     ...++.++.+|++|.+++.++++       ++|+|
T Consensus        24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (277)
T 2rhc_B           24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL  103 (277)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999999865332110     01358899999999999887765       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc--C---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET--K---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.  +   +.++||++||...+.+..+              
T Consensus       104 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------  169 (277)
T 2rhc_B          104 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--------------  169 (277)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC--------------
Confidence            999996432      12345678999999999999998775  2   3468999999866533211              


Q ss_pred             CChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.+    .+.|+++++++||++++|.
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  210 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  210 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence            145999999777666554    4458999999999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=4.4e-28  Score=191.90  Aligned_cols=161  Identities=16%  Similarity=0.092  Sum_probs=125.7

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|  +||++++++|+++|++|++++|+....+.+.    ....+.++++|++|.+++.++++       ++|+
T Consensus        32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  111 (296)
T 3k31_A           32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDF  111 (296)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999997  9999999999999999999999854221111    01356899999999999888775       6899


Q ss_pred             EEEcCccCC----------CCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||||...          ...+++++.+++|+.++.++++++.+.+. ..+||++||...+.+...             
T Consensus       112 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~-------------  178 (296)
T 3k31_A          112 VVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH-------------  178 (296)
T ss_dssp             EEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-------------
T ss_pred             EEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC-------------
Confidence            999999752          12235677899999999999999998753 358999999876643221             


Q ss_pred             cCChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                       ...|+.+|++.+.+.+    ++.++|+++++++||+++++..
T Consensus       179 -~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  220 (296)
T 3k31_A          179 -YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLAS  220 (296)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSC
T ss_pred             -chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchh
Confidence             2459999996665554    4455689999999999999864

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=5.1e-29  Score=195.77  Aligned_cols=160  Identities=18%  Similarity=0.187  Sum_probs=124.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CC---ceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EG---ALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~---~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.++..    . ..   ++.++.+|++|++++.++++       ++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (280)
T 1xkq_A            8 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI   87 (280)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            6999999999999999999999999999999865332211    1 11   68899999999998887765       68


Q ss_pred             CEEEEcCccCCCC----------CCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccC-CccccCCCccc
Q 028444           67 HVIFHTAALVEPW----------LPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGST-DGYIADENQVH  133 (209)
Q Consensus        67 d~vi~~a~~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~-~~~~~~e~~~~  133 (209)
                      |+||||||.....          .+++++.+++|+.++.++++++.+.+.  .++||++||..++.+. .+         
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---------  158 (280)
T 1xkq_A           88 DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD---------  158 (280)
T ss_dssp             CEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS---------
T ss_pred             CEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCc---------
Confidence            9999999964321          124567899999999999999876531  1799999998766432 11         


Q ss_pred             cccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          134 EEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                           ...|+.+|++.+.+.+.+    .++|+++++++||++++|.
T Consensus       159 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  199 (280)
T 1xkq_A          159 -----FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  199 (280)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence                 145999999777666554    4569999999999999984

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.95  E-value=7.9e-29  Score=194.24  Aligned_cols=160  Identities=18%  Similarity=0.198  Sum_probs=125.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+....     ..++.++++|++|.+++.++++      ++|+||
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lv  114 (275)
T 4imr_A           35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILV  114 (275)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            69999999999999999999999999999998765443211     2468999999999988877765      689999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+...              ...
T Consensus       115 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------------~~~  180 (275)
T 4imr_A          115 INASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV--------------VTA  180 (275)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC--------------chh
Confidence            99996422      234567789999999999999986542   3468999999876642211              145


Q ss_pred             HHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.||++.+.+.+.    +.++|+++++++||++.+|.
T Consensus       181 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  218 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDR  218 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence            99999966655544    45569999999999999873

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.95  E-value=3.1e-28  Score=189.46  Aligned_cols=197  Identities=18%  Similarity=0.124  Sum_probs=138.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.....      ...++.++++|++|.+++.++++       ++|+
T Consensus        16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   95 (265)
T 1h5q_A           16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   95 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999999999755422100      01368899999999998877764       4899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+    ..++||++||..++.......       ....+
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-------~~~~~  168 (265)
T 1h5q_A           96 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL-------NGSLT  168 (265)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-------TEECS
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc-------ccccc
Confidence            9999997432      223456779999999999999987642    236899999987654321100       01112


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|.+.+.+.+.++    ++++++++++||+++++.....   ............+...+++++|+|++
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~  239 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIPLNRFAQPEEMTGQ  239 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcCcccCCCCHHHHHHH
Confidence            3569999998877766654    4589999999999999853211   11222222222233346778888764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.95  E-value=5.3e-29  Score=193.63  Aligned_cols=161  Identities=17%  Similarity=0.126  Sum_probs=119.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++++..  ..++.++.+|++|.+++.++++       ++|+||||
T Consensus        11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   90 (261)
T 3n74_A           11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNN   90 (261)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            69999999999999999999999999999998654332211  1368999999999999887775       68999999


Q ss_pred             CccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-------ccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-------VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||....       ..+++++.+++|+.++.++++++.+.+.       ..+||++||...+.+.+.              
T Consensus        91 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  156 (261)
T 3n74_A           91 AGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN--------------  156 (261)
T ss_dssp             CCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT--------------
T ss_pred             CccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC--------------
Confidence            997532       2234567899999999999998876531       346999999876543221              


Q ss_pred             CChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ...|+.+|++.+.+.+.    +.++++++++++||++.+|..
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  198 (261)
T 3n74_A          157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLL  198 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhh
Confidence            14599999966666555    445689999999999999853

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.95  E-value=3.4e-28  Score=191.53  Aligned_cols=161  Identities=13%  Similarity=0.084  Sum_probs=124.6

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCC---CCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~---~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+  |+||++++++|+++|++|++++|+.+   ..+++.. ..++.++.+|++|.+++.++++       ++|+
T Consensus        23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  102 (285)
T 2p91_A           23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDI  102 (285)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999  99999999999999999999999763   1111110 1246789999999999887765       6899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCcccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ||||||....          ..+++++.+++|+.++.++++++.+.+.  .++||++||...+.+.++            
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  170 (285)
T 2p91_A          103 IVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPH------------  170 (285)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTT------------
T ss_pred             EEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCC------------
Confidence            9999997431          1234567899999999999999988642  368999999766543211            


Q ss_pred             ccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          137 YFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                        ...|+.+|++.+.+.+.+    .++|+++++++||++++|..
T Consensus       171 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  212 (285)
T 2p91_A          171 --YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA  212 (285)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence              245999999777666554    44589999999999999864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.94  E-value=4.2e-27  Score=184.61  Aligned_cols=165  Identities=18%  Similarity=0.084  Sum_probs=125.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC------------C-----CCCCceEEEEccCCCHHHHHHHhc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------------L-----PSEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~------------~-----~~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      ++|||||+|+||++++++|+++|++|++++|+......            .     ....++.++++|++|++++.++++
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   94 (278)
T 3sx2_A           15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQ   94 (278)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            69999999999999999999999999999987321110            0     001368999999999999988775


Q ss_pred             -------CcCEEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCc
Q 028444           65 -------GCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        65 -------~~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                             ++|+||||||....  ..+++++.+++|+.++.++++++.+.+    ...+||++||...+.+....      
T Consensus        95 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  168 (278)
T 3sx2_A           95 AGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA------  168 (278)
T ss_dssp             HHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC------
Confidence                   78999999997533  334577899999999999999987643    24689999998765432110      


Q ss_pred             cccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          132 VHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                          ......|+.+|++.+.+.+.    +.++|+++++++||++++|..
T Consensus       169 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  213 (278)
T 3sx2_A          169 ----DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI  213 (278)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             ----CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc
Confidence                00124599999966655554    455689999999999999864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=3.7e-28  Score=186.65  Aligned_cols=191  Identities=16%  Similarity=0.125  Sum_probs=133.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-------cCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~~a   73 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++..+   ..++.++++|++| +++.+++       .++|+|||||
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---SLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---HHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---hhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECC
Confidence            379999999999999999999999999999998654211   1137889999999 7766554       3799999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+...            .+...|+.
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~~~~~Y~~  146 (239)
T 2ekp_A           79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP------------VPIPAYTT  146 (239)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------------SCCHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC------------CCCccHHH
Confidence            96422      223467789999999999999986532   3579999999877654210            01245999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       145 sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +|.+.+.+.+.+    .++|+++++++||+++++...... .............+...+.+++|+|++
T Consensus       147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~  213 (239)
T 2ekp_A          147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR-QNPELYEPITARIPMGRWARPEEIARV  213 (239)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc-cCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            999777665554    456999999999999998421000 001222222222233345667777654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=8.6e-28  Score=186.90  Aligned_cols=160  Identities=23%  Similarity=0.273  Sum_probs=124.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+....  ..++.++++|++|.+++.++++       ++|+||||
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~   88 (260)
T 1nff_A            9 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNN   88 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999997654322110  1248889999999999988876       79999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.++              ...|+
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  154 (260)
T 1nff_A           89 AGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA--------------CHGYT  154 (260)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC--------------chhHH
Confidence            997432      223466789999999998888775432   3579999999877643221              14599


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|.+.+.+.+.+    .++|+++++++||+++||.
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  190 (260)
T 1nff_A          155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM  190 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCc
Confidence            9999777766654    3468999999999999974

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.94  E-value=3e-28  Score=190.14  Aligned_cols=159  Identities=17%  Similarity=0.258  Sum_probs=124.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc---CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF---GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.++..       ....+.++.+|+++.+.+.++++   ++|+|||
T Consensus        12 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   91 (267)
T 3t4x_A           12 TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILIN   91 (267)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            6999999999999999999999999999999865432211       11357889999999999888775   6899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||...+      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ...|
T Consensus        92 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  157 (267)
T 3t4x_A           92 NLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE--------------MAHY  157 (267)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT--------------CHHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc--------------chHH
Confidence            9997532      223566779999999999999886642   3468999999877643221              2459


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 028444          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~  174 (209)
                      +.+|++.+.+.+.++    ++|++++.++||.+.+|
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  193 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE  193 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence            999997777666654    45799999999999986

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.94  E-value=1.3e-28  Score=192.70  Aligned_cols=162  Identities=23%  Similarity=0.281  Sum_probs=120.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEE-cCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++ |+.+..+.+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus        28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            599999999999999999999999998874 4433222110     11368899999999999887765       6899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC------CccEEEEEccceeeccCCccccCCCccccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      ||||||....       ..+++++.+++|+.++.++++++.+.+      +.++||++||..++.+...           
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  176 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT-----------  176 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT-----------
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC-----------
Confidence            9999997532       223466789999999999999887652      2458999999877643211           


Q ss_pred             cccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                        ....|+.+|++.+.+.+.+    .++|+++++++||+++++..
T Consensus       177 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  219 (272)
T 4e3z_A          177 --QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLH  219 (272)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcc
Confidence              0134999999777665554    45589999999999999853

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.94  E-value=1.7e-27  Score=183.82  Aligned_cols=160  Identities=21%  Similarity=0.255  Sum_probs=123.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.+.     ...++.++++|++|++++.++++       ++|+|
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   88 (247)
T 2jah_A            9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDIL   88 (247)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999765432211     01368899999999999887764       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.+.  .++||++||...+.+..+              ...
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  154 (247)
T 2jah_A           89 VNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRN--------------AAV  154 (247)
T ss_dssp             EECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTT--------------CHH
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCC--------------CcH
Confidence            999996422      2234567899999999999999876431  169999999876543211              145


Q ss_pred             HHHHHHHHHHH----HHHHhhcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|+..+.+    ..++.++|+++++++||++.++.
T Consensus       155 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  192 (247)
T 2jah_A          155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL  192 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence            99999855554    44555679999999999999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.94  E-value=1.5e-27  Score=187.82  Aligned_cols=176  Identities=16%  Similarity=0.235  Sum_probs=130.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (209)
                      |+|+||||||+||++++++|.++ |++|++++|++.+...+.. .+++++++|++|++++.++++++|+|||+|+.... 
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS-
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc-
Confidence            89999999999999999999998 9999999998776544322 48999999999999999999999999999985322 


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                             ...|+.++.++++++++. ++++||++||...   ....+.             .+...+..+|+.+   .+.
T Consensus        79 -------~~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~---~~~~~~-------------~~~~~~~~~e~~~---~~~  131 (289)
T 3e48_A           79 -------SFKRIPEVENLVYAAKQS-GVAHIIFIGYYAD---QHNNPF-------------HMSPYFGYASRLL---STS  131 (289)
T ss_dssp             -------HHHHHHHHHHHHHHHHHT-TCCEEEEEEESCC---STTCCS-------------TTHHHHHHHHHHH---HHH
T ss_pred             -------chhhHHHHHHHHHHHHHc-CCCEEEEEcccCC---CCCCCC-------------ccchhHHHHHHHH---HHc
Confidence                   245899999999999988 4789999999432   111000             0112222333332   346


Q ss_pred             CCCEEEEecCceecCCCCCcchhHHHHHHHH----hcCCceEEEEEEeeeeecC
Q 028444          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLL----FSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~dva~~i  209 (209)
                      +++++++||+++||+.    ..++..+....    -.++....|++++|+|+++
T Consensus       132 g~~~~ilrp~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~  181 (289)
T 3e48_A          132 GIDYTYVRMAMYMDPL----KPYLPELMNMHKLIYPAGDGRINYITRNDIARGV  181 (289)
T ss_dssp             CCEEEEEEECEESTTH----HHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHH
T ss_pred             CCCEEEEecccccccc----HHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHH
Confidence            8999999999999973    23333333321    1356667899999998763

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.94  E-value=1.5e-26  Score=182.09  Aligned_cols=161  Identities=20%  Similarity=0.159  Sum_probs=125.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC--------------------C-CCCCceEEEEccCCCHHHHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------------------L-PSEGALELVYGDVTDYRSLV   60 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~--------------------~-~~~~~~~~~~~Dl~~~~~~~   60 (209)
                      +++||||+|+||++++++|+++|++|++++|+......                    + ....++.++++|++|++++.
T Consensus        13 ~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   92 (286)
T 3uve_A           13 VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALK   92 (286)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHH
Confidence            69999999999999999999999999999987432110                    0 01136889999999999988


Q ss_pred             HHhc-------CcCEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccC
Q 028444           61 DACF-------GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGST  122 (209)
Q Consensus        61 ~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~  122 (209)
                      ++++       ++|+||||||....       ..+++++.+++|+.++.++++++.+.+    ...+||++||...+.+.
T Consensus        93 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  172 (286)
T 3uve_A           93 AAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY  172 (286)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC
Confidence            8775       68999999997432       223567789999999999999987653    23589999998776433


Q ss_pred             CccccCCCccccccccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCCC
Q 028444          123 DGYIADENQVHEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       123 ~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ...              ..|+.+|++.+.+.    .++.++|+++++++||++.+|..
T Consensus       173 ~~~--------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  216 (286)
T 3uve_A          173 PHT--------------GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPML  216 (286)
T ss_dssp             TTC--------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTT
T ss_pred             CCc--------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcc
Confidence            221              45999999655554    45556799999999999999854

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=1.5e-27  Score=184.95  Aligned_cols=160  Identities=16%  Similarity=0.133  Sum_probs=124.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+..  ..++.++.+|++|.+++.++++       ++|+|||
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   85 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN   85 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            479999999999999999999999999999997654322111  1258899999999999888775       7999999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||....      ..+++++.+++|+.++.++++.+.+.+   +.++||++||..++.+.++              ...|
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  151 (254)
T 1hdc_A           86 NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL--------------TSSY  151 (254)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------CHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC--------------chhH
Confidence            9997432      223567789999999998877765432   3579999999877643211              1459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      +.+|...+.+.+.+    .++|+++++++||++++|
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  187 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP  187 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc
Confidence            99999777665554    456899999999999986

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.94  E-value=9e-28  Score=187.38  Aligned_cols=187  Identities=22%  Similarity=0.152  Sum_probs=134.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+......      ...+.+|++|.+++..+++       ++|+||||||
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~------~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg  103 (266)
T 3uxy_A           30 VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA------DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG  103 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC------SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh------hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            69999999999999999999999999999998665432      2445789999988876654       6899999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|+.+
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  169 (266)
T 3uxy_A          104 VISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG--------------HALYCLT  169 (266)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT--------------BHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC--------------ChHHHHH
Confidence            7532      234567789999999999999985432   3578999999877643221              2459999


Q ss_pred             HHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCc----chhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          146 KAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT----GNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       146 K~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |++.+.+.+.    +.++|+++++++||++++|.....    ..........+....+...+++++|+|++
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  240 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADV  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            9976666554    445689999999999998732000    00011122333334444456667777654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.94  E-value=5.5e-27  Score=179.78  Aligned_cols=160  Identities=21%  Similarity=0.123  Sum_probs=125.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.+++++...  ..++.++.+|++|.+++.++++       ++|+||||
T Consensus         5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnn   84 (235)
T 3l6e_A            5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHC   84 (235)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence            59999999999999999999999999999998654332111  1258999999999999887765       58999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+.  ..++|++||...+.+..+.              ..|+.
T Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------------~~Y~a  150 (235)
T 3l6e_A           85 AGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANE--------------SLYCA  150 (235)
T ss_dssp             CCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSH--------------HHHHH
T ss_pred             CCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCC--------------cHHHH
Confidence            997422      2345678899999999999999976532  2389999998766433221              35999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ||++.+.+.+.++    ++|++++.++||++.++.
T Consensus       151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  185 (235)
T 3l6e_A          151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF  185 (235)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence            9997776665543    458999999999999874

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.94  E-value=4.7e-28  Score=191.48  Aligned_cols=161  Identities=14%  Similarity=0.085  Sum_probs=123.2

Q ss_pred             EEEEEcCCCh--hHHHHHHHHHhCCCeEEEEEcCCCCCCC---CC-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRTSDISG---LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~--IG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+  ||++++++|+++|++|++++|+....+.   +. ...++.++++|++|.+++.++++       ++|+
T Consensus        33 ~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (293)
T 3grk_A           33 RGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDF  112 (293)
T ss_dssp             EEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999977  9999999999999999999987431111   10 01358899999999999888775       6899


Q ss_pred             EEEcCccCC------C----CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVE------P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||||...      +    ..+++++.+++|+.++.++++++.+.+. ..+||++||...+.+...             
T Consensus       113 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------------  179 (293)
T 3grk_A          113 LVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN-------------  179 (293)
T ss_dssp             EEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT-------------
T ss_pred             EEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCc-------------
Confidence            999999753      1    2235667899999999999999988653 358999999877643222             


Q ss_pred             cCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                       ...|+.+|++.+.+.+.    +.++|+++++++||+++++..
T Consensus       180 -~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  221 (293)
T 3grk_A          180 -YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAA  221 (293)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhh
Confidence             24599999966655544    455699999999999999753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=1.6e-28  Score=190.43  Aligned_cols=160  Identities=23%  Similarity=0.225  Sum_probs=122.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++|||||+|+||++++++|+++|++|+++++ +..+.....     ...++.++++|++|.+++.++++       ++|+
T Consensus        15 ~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999999884 443321110     11368899999999999887775       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              .
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  160 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG--------------Q  160 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC--------------C
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC--------------C
Confidence            9999997532      223466789999999999999886532   3468999999876643321              2


Q ss_pred             ChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.+    ++.++|+++++++||++.++.
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  200 (256)
T 3ezl_A          161 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM  200 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence            459999996655554    445568999999999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=1.3e-28  Score=192.39  Aligned_cols=194  Identities=17%  Similarity=0.077  Sum_probs=140.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc-CCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r-~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      |+++||||+|+||++++++|+++|++|++++| +.++.+.+    . ...++.++.+|++|.+++.++++       ++|
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d  101 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD  101 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999999999999999999998 43322111    0 01368899999999999888776       789


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceee-ccCCccccCCCccccccccC
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+. .++||++||..++ .+..+              .
T Consensus       102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------------~  167 (274)
T 1ja9_A          102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN--------------H  167 (274)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS--------------C
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCC--------------C
Confidence            99999996432      2234567899999999999999987632 2589999998776 33211              1


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-c--------hhH-HHHHHHHhcCCceEEEEEEeee
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-G--------NLV-AKLVRLLFSQHFSLVFFHCQIT  205 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~-~--------~~~-~~~~~~~~~~~~~~~~~~~~dv  205 (209)
                      ..|+.+|.+.+.+.+.++    ..++++++++||+++++..... .        ... ......+..+.+...+++++|+
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  247 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADI  247 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHH
Confidence            459999998887776654    3589999999999998732100 0        011 2223333344444567888998


Q ss_pred             eec
Q 028444          206 CHA  208 (209)
Q Consensus       206 a~~  208 (209)
                      |++
T Consensus       248 a~~  250 (274)
T 1ja9_A          248 GRA  250 (274)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.94  E-value=1.4e-27  Score=184.46  Aligned_cols=161  Identities=22%  Similarity=0.273  Sum_probs=124.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      |+++||||+|+||++++++|+++|++|++++|+.++++.+..  ..++.++.+|++|.+++.++++       ++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            689999999999999999999999999999998654322111  1268899999999999988875       5899999


Q ss_pred             cCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           72 TAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        72 ~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||...   +    ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              ...
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~  146 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG--------------GNV  146 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT--------------CHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC--------------Cch
Confidence            999642   1    223466789999999999999987532   3479999999876543211              145


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCcee-cCC
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIY-GPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~-g~~  175 (209)
                      |+.+|+..+.+.+.++    ++|+++++++||++. +|.
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~  185 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcc
Confidence            9999997777766553    458999999999999 664

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.94  E-value=2.2e-26  Score=182.37  Aligned_cols=161  Identities=18%  Similarity=0.155  Sum_probs=124.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC------------C----CC-CCCceEEEEccCCCHHHHHHHhc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------------G----LP-SEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~------------~----~~-~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      +++||||+|+||++++++|+++|++|++++|++....            +    +. ...++.++++|++|.+++.++++
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  109 (299)
T 3t7c_A           30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVD  109 (299)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            6999999999999999999999999999998743110            0    00 01368899999999999887775


Q ss_pred             -------CcCEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccc
Q 028444           65 -------GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYI  126 (209)
Q Consensus        65 -------~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~  126 (209)
                             ++|+||||||....       ..+++++.+++|+.++.++++++.+.+    +..+||++||...+.+.... 
T Consensus       110 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~-  188 (299)
T 3t7c_A          110 DGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENI-  188 (299)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTC-
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCc-
Confidence                   68999999996432       223467789999999999999987642    24689999998776433221 


Q ss_pred             cCCCccccccccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCCC
Q 028444          127 ADENQVHEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                                   ..|+.+|++.+.+.    .+++++|+++++++||++.+|..
T Consensus       189 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  229 (299)
T 3t7c_A          189 -------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML  229 (299)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccc
Confidence                         45999999655554    44555699999999999999854

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=3.8e-28  Score=188.79  Aligned_cols=161  Identities=19%  Similarity=0.142  Sum_probs=121.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++++.. ..+.    +. ...++.++++|++|.+++.++++       ++|+
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999999855433 2111    10 11368899999999999888775       6899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceee-ccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....       ..+++++.+++|+.++.++++++.+.+. .++||++||...+ .+..+              .
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~  155 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG--------------A  155 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT--------------C
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC--------------c
Confidence            9999986411       2234567899999999999999998752 2489999998776 22211              1


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|++.+.+.+.++.   .+++++.++||++.++..
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~  195 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFH  195 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccc
Confidence            4599999977776666542   139999999999998743

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.94  E-value=4.1e-28  Score=188.90  Aligned_cols=160  Identities=19%  Similarity=0.177  Sum_probs=122.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++|||||+|+||++++++|+++|++|++++|+..+++.+.     ...++.++.+|++|.+++.++++       ++|+|
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  110 (262)
T 3rkr_A           31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVL  110 (262)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999999865432211     11368899999999999887764       58999


Q ss_pred             EEcCccCC-------CCCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVE-------PWLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||...       ...+++++.+++|+.++.++++++.+.   .+.++||++||..++.+..+              .
T Consensus       111 v~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  176 (262)
T 3rkr_A          111 VNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD--------------G  176 (262)
T ss_dssp             EECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT--------------C
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC--------------C
Confidence            99999721       122346678999999999999998653   23579999999877643322              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.+.+    .+.|+++++++||.+.++.
T Consensus       177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~  216 (262)
T 3rkr_A          177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF  216 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence            45999999766665554    4568999999999999864

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4.2e-28  Score=188.03  Aligned_cols=193  Identities=17%  Similarity=0.229  Sum_probs=137.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +++||||+|+||++++++|+++|  +.|++++|+.++++++.+  ..++.++++|++|.+++.++++       ++|+||
T Consensus         4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv   83 (254)
T 3kzv_A            4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLV   83 (254)
T ss_dssp             EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEE
Confidence            69999999999999999999885  788888887654332211  1368899999999999888775       689999


Q ss_pred             EcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||...+       ..+++++.+++|+.++.++++++.+.+.  .++||++||...+.+..+              ...
T Consensus        84 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~--------------~~~  149 (254)
T 3kzv_A           84 ANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSS--------------WGA  149 (254)
T ss_dssp             EECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCC--------------SHH
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCC--------------cch
Confidence            99997422       2234667899999999999999865321  269999999877654322              145


Q ss_pred             HHHHHHHHHHHHHHHhh--cCCCEEEEecCceecCCCCCcc------hhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          142 YERSKAVADKIALQAAS--EGLPIVPVYPGVIYGPGKLTTG------NLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~~--~~~~~~~~rp~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+.+|++.+.+.+.++.  .+++++.++||++.+|......      .........+....+...+++++|+|++
T Consensus       150 Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~  224 (254)
T 3kzv_A          150 YGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATV  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHH
Confidence            99999998888888763  4899999999999998542110      0012222222223334457778887764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.94  E-value=5.9e-28  Score=189.24  Aligned_cols=161  Identities=12%  Similarity=0.052  Sum_probs=124.1

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCC---CCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD---ISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~---~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+  |+||++++++|+++|++|++++|+.+.   .+++.. ..++.++++|++|.+++.++++       ++|+
T Consensus         8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   87 (275)
T 2pd4_A            8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDF   87 (275)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999  999999999999999999999998641   111111 1247889999999999887765       6899


Q ss_pred             EEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ||||||....          ..+++++.+++|+.++.++++++.+.+. .++||++||...+.+..+             
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  154 (275)
T 2pd4_A           88 IVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-------------  154 (275)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-------------
T ss_pred             EEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC-------------
Confidence            9999997431          1234667899999999999999988742 258999999766533211             


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                       ...|+.+|++.+.+.+.+    .++|+++++++||++.++..
T Consensus       155 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  196 (275)
T 2pd4_A          155 -YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS  196 (275)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             -chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchh
Confidence             145999999777666554    45589999999999999853

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-27  Score=184.60  Aligned_cols=187  Identities=15%  Similarity=0.092  Sum_probs=129.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC-CHHHHHHHhcCcCEEEEcCccCCC-
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP-   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vi~~a~~~~~-   78 (209)
                      ++++||||+|+||++++++|+++|++|++++|+....+++   ..+.++ +|+. +.+.+.+.+.++|+||||||.... 
T Consensus        20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~~   95 (249)
T 1o5i_A           20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGPKAG   95 (249)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCCCCB
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh---CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCCCCC
Confidence            4799999999999999999999999999999976332222   246677 9993 334444444589999999996432 


Q ss_pred             -----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                           ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|+.+|.+.+
T Consensus        96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK~a~~  161 (249)
T 1o5i_A           96 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN--------------LYTSNSARMALT  161 (249)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC--------------CchHHHHHHHHH
Confidence                 223466789999999998888765432   3579999999887754321              145999999776


Q ss_pred             HHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHH-HHhcCCceEEEEEEeeeeec
Q 028444          151 KIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVR-LLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       151 ~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+.+.+    .++|+++++++||++++|...   ........ .+....+...+++++|+|++
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~p~~~~~~~~dvA~~  221 (249)
T 1o5i_A          162 GFLKTLSFEVAPYGITVNCVAPGWTETERVK---ELLSEEKKKQVESQIPMRRMAKPEEIASV  221 (249)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTHH---HHSCHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCCccCccc---ccchhhHHHHHHhcCCCCCCcCHHHHHHH
Confidence            665554    456899999999999998531   11111111 22222233345677777654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.94  E-value=2.7e-27  Score=185.12  Aligned_cols=161  Identities=19%  Similarity=0.184  Sum_probs=123.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++++.. +.+.+.     ...++.++++|++|.+++.++++       ++|+
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           33 TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            6999999999999999999999999999977642 111110     11368899999999999888775       7899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeecc-CCccccCCCccccccccCC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGS-TDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~-~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+. .++||++||...... .+              ...
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~--------------~~~  178 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWP--------------GIS  178 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST--------------TCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC--------------Cch
Confidence            9999997422      2345678899999999999999988742 468999998644321 11              124


Q ss_pred             hHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCCC
Q 028444          141 QYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      .|+.+|++.+.+.+    ++.++|+++++++||++.+|..
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  218 (271)
T 3v2g_A          179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMN  218 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcc
Confidence            59999996665554    4555699999999999999854

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.6e-27  Score=185.80  Aligned_cols=160  Identities=19%  Similarity=0.189  Sum_probs=125.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+....  ..++.++++|++|.+++.++++       ++|+||||
T Consensus        31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  110 (277)
T 3gvc_A           31 VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVAN  110 (277)
T ss_dssp             EEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999998654332111  1368899999999999877765       68999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+..+              ...|+
T Consensus       111 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y~  176 (277)
T 3gvc_A          111 AGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG--------------TGAYG  176 (277)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------chhHH
Confidence            997422      234567789999999999999987642   3468999999876543221              14599


Q ss_pred             HHHHHHHHHHH----HHhhcCCCEEEEecCceecCC
Q 028444          144 RSKAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .+|++.+.+.+    ++.++|+++++++||++++|.
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  212 (277)
T 3gvc_A          177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM  212 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence            99996666555    445579999999999999873

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=8.1e-28  Score=189.55  Aligned_cols=160  Identities=17%  Similarity=0.177  Sum_probs=125.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC---eEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------   64 (209)
                      +++||||+|+||++++++|+++|+   +|++++|+.++++++.       ...++.++++|++|.+++.++++       
T Consensus        35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  114 (287)
T 3rku_A           35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFK  114 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGC
T ss_pred             EEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            699999999999999999999997   9999999865433211       12368899999999999988875       


Q ss_pred             CcCEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccc
Q 028444           65 GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        65 ~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      ++|+||||||...+       ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+          
T Consensus       115 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~----------  184 (287)
T 3rku_A          115 DIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT----------  184 (287)
T ss_dssp             SCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC----------
Confidence            58999999996431       223567789999999999999986432   3479999999876543221          


Q ss_pred             ccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          135 EKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                          ...|+.+|++.+.+.+.+    .++|+++++++||++.++.
T Consensus       185 ----~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          185 ----GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence                145999999766666554    4468999999999999973

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.94  E-value=7.8e-28  Score=187.82  Aligned_cols=162  Identities=12%  Similarity=0.054  Sum_probs=121.6

Q ss_pred             CEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+  |+||++++++|+++|++|++++|+....+.+    ....++.++++|++|.+++..+++       ++|
T Consensus        15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   94 (271)
T 3ek2_A           15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLD   94 (271)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999  9999999999999999999999974321111    011357899999999999888775       579


Q ss_pred             EEEEcCccCCC-----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccc
Q 028444           68 VIFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        68 ~vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      +||||||....           ..+++.+.+++|+.++.++++++.+.+. .++||++||...+.+..+           
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  163 (271)
T 3ek2_A           95 GLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN-----------  163 (271)
T ss_dssp             EEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred             EEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC-----------
Confidence            99999997431           2234567899999999999999988642 358999999876643221           


Q ss_pred             cccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          136 KYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                         ...|+.+|++.+.+.+.    +.++|+++++++||++.++..
T Consensus       164 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  205 (271)
T 3ek2_A          164 ---YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAA  205 (271)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----
T ss_pred             ---ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhh
Confidence               25699999966665554    445689999999999999754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.94  E-value=6.4e-28  Score=189.94  Aligned_cols=191  Identities=17%  Similarity=0.155  Sum_probs=133.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+    .. ..++.++.+|++|.+++.++++       ++|+
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            3699999999999999999999999999988875432211    00 1368899999999999888763       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++.+.+++|+.++.++++++.+.+   +.++||++||..++.+..+              .
T Consensus       125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  190 (285)
T 2c07_A          125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG--------------Q  190 (285)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC--------------C
Confidence            9999997432      223456789999999999999886532   3479999999876543221              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ..|+.+|.+.+.+.+.+    .+.|+++++++||+++++......   ...........+...+++++|+|++
T Consensus       191 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~dvA~~  260 (285)
T 2c07_A          191 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---EQIKKNIISNIPAGRMGTPEEVANL  260 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---HHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---HHHHHHHHhhCCCCCCCCHHHHHHH
Confidence            45999999776665554    445899999999999998532211   1222222222222345667777654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.94  E-value=1.4e-27  Score=185.30  Aligned_cols=192  Identities=13%  Similarity=0.065  Sum_probs=135.8

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|  +||++++++|+++|++|++.+|+.+.++++.      ...++.++++|++|++++.++++       ++
T Consensus         8 ~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (256)
T 4fs3_A            8 TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNI   87 (256)
T ss_dssp             EEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            699999876  9999999999999999999999865433211      11368899999999999877664       68


Q ss_pred             CEEEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccc
Q 028444           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      |++|||||....          +.+++...+++|+.++..+++.+.+.++ ..+||++||.....+.++.          
T Consensus        88 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~----------  157 (256)
T 4fs3_A           88 DGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY----------  157 (256)
T ss_dssp             SEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT----------
T ss_pred             CEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc----------
Confidence            999999996321          1123445678999999999998887643 3589999997665332222          


Q ss_pred             cccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          136 KYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       136 ~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                          ..|+.+|+    +++.+..+++++|++++++.||++.+|...... ........+....+...+..++|+|++
T Consensus       158 ----~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~Pl~R~g~peevA~~  229 (256)
T 4fs3_A          158 ----NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-GFNTILKEIKERAPLKRNVDQVEVGKT  229 (256)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred             ----hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-CCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                34999999    566677777788999999999999987542211 112223333322333344556666543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.94  E-value=2.9e-28  Score=187.49  Aligned_cols=191  Identities=16%  Similarity=0.148  Sum_probs=132.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcCCCCCCCCC-----CCCceEE-EEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALEL-VYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~-----~~~~~~~-~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+|+||++++++|+++|++|+++ +|+.++.+.+.     ...++.. +.+|++|.+++.++++       ++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            379999999999999999999999999998 67644322110     0124566 8999999999887754       79


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+.++             
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  148 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG-------------  148 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS-------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC-------------
Confidence            999999997432      223456789999999888888775432   3579999999866543211             


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ...|+.+|.+.+.+.+.+    .+.++++++++||+++||......   ...........+...+++++|+|++
T Consensus       149 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~  219 (245)
T 2ph3_A          149 -QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---QEVKEAYLKQIPAGRFGRPEEVAEA  219 (245)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence             145999999766665554    445899999999999987431111   1122222223333346677777764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.94  E-value=4.2e-28  Score=189.36  Aligned_cols=160  Identities=20%  Similarity=0.191  Sum_probs=121.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++.+++.. ..+.+.     ...++.++++|++|.+++.++++       ++|+
T Consensus        29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999866443 211110     11368899999999999888775       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+. .++||++||..++.+.+..              ..
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~  174 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSY--------------GI  174 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTC--------------HH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCc--------------hH
Confidence            9999997422      2234667899999999999999987642 3589999998765433221              45


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|++.+.+.+.++    ++|+++++++||++.++.
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (267)
T 3u5t_A          175 YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL  212 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence            9999997776666554    458999999999999874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.94  E-value=1.2e-28  Score=195.00  Aligned_cols=160  Identities=24%  Similarity=0.202  Sum_probs=124.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC--CCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--DISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~--~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++|||||+|+||++++++|+++|++|++++|+..  ..+.+.     ...++.++++|++|.+++.++++       ++|
T Consensus        51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999999999999988632  111100     11368899999999998877764       689


Q ss_pred             EEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +||||||....       ..+++++.+++|+.++.++++++.+.+. ..+||++||..++.+..+.              
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------------  196 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHL--------------  196 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTC--------------
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCc--------------
Confidence            99999997421       2235677899999999999999998753 2489999998877543222              


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|++.+.+.+.    +.++|+++++++||++++|.
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence            4599999966665544    45569999999999999863

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.94  E-value=1.8e-27  Score=183.76  Aligned_cols=160  Identities=19%  Similarity=0.205  Sum_probs=124.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.++...  ..++.++++|++|.+++.++++       ++|+|||
T Consensus         7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   86 (247)
T 3rwb_A            7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVN   86 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            369999999999999999999999999999997654322111  1368899999999999888775       6899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||....      ..+++++.+++|+.++.++++++.+.+    ...+||++||...+.+.++.              ..
T Consensus        87 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~  152 (247)
T 3rwb_A           87 NASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM--------------AA  152 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTC--------------HH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCc--------------hh
Confidence            9997422      224567789999999999999865432    24689999998776543221              45


Q ss_pred             HHHHHHHHH----HHHHHHhhcCCCEEEEecCceecC
Q 028444          142 YERSKAVAD----KIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       142 Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      |+.+|++.+    .+..++.++|+++++++||++.++
T Consensus       153 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  189 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD  189 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence            999998555    455555567999999999999986

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.94  E-value=5.2e-28  Score=188.56  Aligned_cols=160  Identities=19%  Similarity=0.156  Sum_probs=123.8

Q ss_pred             EEEEEcCCC-hhHHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASG-YLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G-~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+| +||++++++|+++|++|++++|+.++.+..      ....++.++++|++|.+++.++++       ++|
T Consensus        24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  103 (266)
T 3o38_A           24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLD  103 (266)
T ss_dssp             EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCc
Confidence            699999997 799999999999999999999986532211      011379999999999999887775       679


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+    +..+||++||...+.+..+             
T Consensus       104 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  170 (266)
T 3o38_A          104 VLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS-------------  170 (266)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT-------------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC-------------
Confidence            99999997432      223466789999999999999987652    3468999999876643221             


Q ss_pred             cCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                       ...|+.+|++.+.+.+.+    .++|+++++++||++.++.
T Consensus       171 -~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  211 (266)
T 3o38_A          171 -QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF  211 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence             245999999777666554    4468999999999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.94  E-value=2e-26  Score=178.06  Aligned_cols=161  Identities=13%  Similarity=0.146  Sum_probs=121.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCC-CC-CCCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG-LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~-~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++|+. ++.++ +. ...++.++++|++|.+++.++++       ++|+|||
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   88 (249)
T 2ew8_A            9 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVN   88 (249)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            699999999999999999999999999999986 33221 10 01368899999999999887753       7899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+.++              ...|
T Consensus        89 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  154 (249)
T 2ew8_A           89 NAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA--------------YTHY  154 (249)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS--------------CHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC--------------chhH
Confidence            9997432      223466789999999999999865432   3479999999877653221              1459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +.+|...+.+.+.+    .++|+++++++||+++++..
T Consensus       155 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  192 (249)
T 2ew8_A          155 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATT  192 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccc
Confidence            99999776665554    45689999999999999853

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.94  E-value=1.1e-27  Score=186.80  Aligned_cols=189  Identities=17%  Similarity=0.168  Sum_probs=135.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCC-----CCCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|+++.+.. .+.+..     ....++.++.+|++|.+++.++++       ++|+
T Consensus        28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            699999999999999999999999998866543 221110     011368999999999999888775       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHh----cCCccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+    ..+.++||++||...+.+..+.             
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  174 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ-------------  174 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC-------------
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC-------------
Confidence            9999997532      2245677899999999999998742    2245799999998766443221             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ..|+.+|+    +++.+..++.++|+++++++||++.++.....    ...........+...+.+++|+|++
T Consensus       175 -~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p~~~~~~~edva~~  243 (267)
T 4iiu_A          175 -VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIPMKRMGQAEEVAGL  243 (267)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred             -chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence             45999999    44555555666799999999999999865322    2223333333333445566666654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.94  E-value=4.3e-27  Score=182.05  Aligned_cols=152  Identities=16%  Similarity=0.142  Sum_probs=122.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+..       ...+.+|++|.+++.++++       ++|+||||||
T Consensus        24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag   96 (251)
T 3orf_A           24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG   96 (251)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            6999999999999999999999999999999876542       2457889999999887764       4699999999


Q ss_pred             cCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           75 LVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        75 ~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ....       ..+++.+.+++|+.++.++++++.+.+. .++||++||..++.+..+              ...|+.+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK  162 (251)
T 3orf_A           97 GWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG--------------MIAYGATK  162 (251)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHHHHH
T ss_pred             cCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC--------------CchhHHHH
Confidence            6422       1234567899999999999999987642 248999999877643221              14599999


Q ss_pred             HHHHHHHHHHh-h-----cCCCEEEEecCceecC
Q 028444          147 AVADKIALQAA-S-----EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       147 ~~~e~~~~~~~-~-----~~~~~~~~rp~~v~g~  174 (209)
                      ++.+.+.+.++ +     +++++++++||++.++
T Consensus       163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~  196 (251)
T 3orf_A          163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTP  196 (251)
T ss_dssp             HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred             HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence            99888888765 2     4799999999999886

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=3.4e-27  Score=181.59  Aligned_cols=161  Identities=16%  Similarity=0.167  Sum_probs=126.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-----
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-----   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-----   64 (209)
                      +++||||+|+||++++++|+++|+       +|++++|+..+.+.+.     ...++.++.+|++|.+++.++++     
T Consensus         4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (244)
T 2bd0_A            4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   83 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHh
Confidence            699999999999999999999999       9999999754332111     11368899999999999888775     


Q ss_pred             --CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccc
Q 028444           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (209)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~  133 (209)
                        ++|+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+         
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  154 (244)
T 2bd0_A           84 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH---------  154 (244)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---------
T ss_pred             CCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCC---------
Confidence              69999999997432      223466789999999999999986532   3579999999877653221         


Q ss_pred             cccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          134 EEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                           ...|+.+|.+.+.+.+.+    .++|+++++++||+++||..
T Consensus       155 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  196 (244)
T 2bd0_A          155 -----SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW  196 (244)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhh
Confidence                 145999999887776554    45689999999999999853

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=3.6e-26  Score=173.42  Aligned_cols=150  Identities=16%  Similarity=0.142  Sum_probs=120.4

Q ss_pred             EEEEEcCCChhHHHHHHHHH-hCCCeEEEEEcCCC-CCCCCC-CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALL-KQGHSVRALVRRTS-DISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~-~~g~~V~~~~r~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      +|+||||+|+||++++++|+ ++|++|++++|++. +++.+. ...+++++++|++|.+++.++++++|+||||||..  
T Consensus         7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~--   84 (221)
T 3r6d_A            7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES--   84 (221)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC--
T ss_pred             EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC--
Confidence            39999999999999999999 89999999999876 554331 22479999999999999999999999999999842  


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCC-hHHHHHHHHHHHHHHHh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT-QYERSKAVADKIALQAA  157 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~  157 (209)
                                 |+. +.++++++++. +.++||++||..+|+..+......     ...... .|+.+|...|.+++.  
T Consensus        85 -----------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~~~~~~-----~~~~~~~~y~~~K~~~e~~~~~--  144 (221)
T 3r6d_A           85 -----------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFPVALEKW-----TFDNLPISYVQGERQARNVLRE--  144 (221)
T ss_dssp             -----------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSCHHHHHH-----HHHTSCHHHHHHHHHHHHHHHH--
T ss_pred             -----------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCCcccccc-----cccccccHHHHHHHHHHHHHHh--
Confidence                       455 89999999887 468999999998887533211100     001113 699999999987753  


Q ss_pred             hcCCCEEEEecCceecC
Q 028444          158 SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~  174 (209)
                       .+++++++|||+++++
T Consensus       145 -~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          145 -SNLNYTILRLTWLYND  160 (221)
T ss_dssp             -SCSEEEEEEECEEECC
T ss_pred             -CCCCEEEEechhhcCC
Confidence             6899999999999997

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.94  E-value=1.9e-27  Score=185.43  Aligned_cols=161  Identities=16%  Similarity=0.059  Sum_probs=124.1

Q ss_pred             EEEEEcCCCh--hHHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~--IG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+  ||++++++|+++|++|++++|+....+..      ....++.++++|++|.+++.++++       ++
T Consensus         9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (266)
T 3oig_A            9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVI   88 (266)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCC
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCe
Confidence            6999999977  99999999999999999999875321110      011268999999999998887764       68


Q ss_pred             CEEEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccc
Q 028444           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      |+||||||....          ..+++.+.+++|+.++.++++++.+.+. .++||++||...+.+.+.           
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  157 (266)
T 3oig_A           89 HGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN-----------  157 (266)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-----------
T ss_pred             eEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC-----------
Confidence            999999997431          2234567899999999999999998753 358999999876643221           


Q ss_pred             cccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          136 KYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                         ...|+.+|++.+.+.+.    +.++|+++++++||++.++..
T Consensus       158 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  199 (266)
T 3oig_A          158 ---YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSA  199 (266)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGG
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence               14599999966655544    445689999999999999743

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.94  E-value=8.3e-28  Score=187.93  Aligned_cols=160  Identities=18%  Similarity=0.142  Sum_probs=123.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++++..+ .+.+.     ...++.++++|++|.+++.++++       ++|+
T Consensus        20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999998876432 11110     11368999999999999887775       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceee-ccCCccccCCCccccccccCC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+. ..+||++||.... .+.+              ...
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  165 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVP--------------KHS  165 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCT--------------TCH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCC--------------CCc
Confidence            9999997432      2345678899999999999999988753 3589999997522 1111              124


Q ss_pred             hHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|++.+.+.+.    +.++|+++++++||++.+|.
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  204 (270)
T 3is3_A          166 LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM  204 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            599999966655554    45569999999999999984

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=3.8e-26  Score=175.08  Aligned_cols=153  Identities=17%  Similarity=0.204  Sum_probs=109.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      +|+||||+|+||++++++|+++| ++|++++|++.+...+.. .+++++++|++|.+++.++++++|+|||||+..    
T Consensus        25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~----   99 (236)
T 3qvo_A           25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE----   99 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-TTEEEEECCTTCHHHHHHHHTTCSEEEEECCST----
T ss_pred             EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-CCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC----
Confidence            69999999999999999999999 999999998776654433 479999999999999999999999999999841    


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcC
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (209)
                       +       ....+.++++++++. +.++||++||..+|+..............     ..+...+..+|..+   .+.+
T Consensus       100 -~-------~~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l---~~~g  162 (236)
T 3qvo_A          100 -D-------LDIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKFVEWNNAVI-----GEPLKPFRRAADAI---EASG  162 (236)
T ss_dssp             -T-------HHHHHHHHHHHHHHT-TCCEEEEECCCCC---------------------CGGGHHHHHHHHHH---HTSC
T ss_pred             -c-------hhHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcccccchhhcc-----cchHHHHHHHHHHH---HHCC
Confidence             1       113467889999887 47899999999999765432211111100     11223333444333   3579


Q ss_pred             CCEEEEecCceecCCC
Q 028444          161 LPIVPVYPGVIYGPGK  176 (209)
Q Consensus       161 ~~~~~~rp~~v~g~~~  176 (209)
                      ++++++|||+++++..
T Consensus       163 i~~~~vrPg~i~~~~~  178 (236)
T 3qvo_A          163 LEYTILRPAWLTDEDI  178 (236)
T ss_dssp             SEEEEEEECEEECCSC
T ss_pred             CCEEEEeCCcccCCCC
Confidence            9999999999998743

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=2.8e-27  Score=184.99  Aligned_cols=160  Identities=16%  Similarity=0.194  Sum_probs=124.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.. ..++.++++|++|.+++.++++       ++|+|||||
T Consensus        11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA   90 (270)
T 1yde_A           11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNA   90 (270)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            69999999999999999999999999999997653322111 1258899999999999887765       689999999


Q ss_pred             ccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....       ..+++++.+++|+.++.++++++.+.+  +.++||++||...+.+...              ...|+.
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  156 (270)
T 1yde_A           91 GHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ--------------AVPYVA  156 (270)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT--------------CHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC--------------CcccHH
Confidence            97432       122456789999999999999987642  2369999999765433211              135999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      +|...+.+.+.+    .++|+++++++||+++||.
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence            999777666554    4568999999999999973

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.94  E-value=3.6e-27  Score=183.52  Aligned_cols=161  Identities=20%  Similarity=0.207  Sum_probs=124.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+.     ...++.++++|++|++++.++++       ++|+
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            36999999999999999999999999999999764332110     11368899999999998877664       6899


Q ss_pred             EEEcCccC-CC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ||||||.. ..      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+.+.              
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  153 (262)
T 1zem_A           88 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--------------  153 (262)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT--------------
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------
Confidence            99999964 21      223467789999999999999987653   3468999999876643221              


Q ss_pred             CChHHHHHHHHHH----HHHHHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADK----IALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~----~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|+..+.    +..++.++|+++++++||++.++.
T Consensus       154 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (262)
T 1zem_A          154 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF  194 (262)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence            1459999985554    455555679999999999998874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.94  E-value=6.8e-28  Score=188.52  Aligned_cols=160  Identities=18%  Similarity=0.194  Sum_probs=124.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+. +.+.     ...++.++++|++|.+++.++++       ++|+
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999999964321 1110     11368999999999999888775       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++.+.+++|+.++.++++++.+.+   +.++||++||...+.+..+              .
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  176 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG--------------Q  176 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC--------------c
Confidence            9999997532      223566789999999999999886642   3468999999876643321              1


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.+    .++++++++++||++.++.
T Consensus       177 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  216 (271)
T 4iin_A          177 TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM  216 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence            45999999777666554    3468999999999999874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=6.3e-28  Score=191.38  Aligned_cols=160  Identities=14%  Similarity=0.114  Sum_probs=122.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----------CCCCceEEEEccCCCHHHHHHHhc------
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----------PSEGALELVYGDVTDYRSLVDACF------   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~~~~Dl~~~~~~~~~~~------   64 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+..          ....++.++++|++|.+++.++++      
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            3799999999999999999999999999999975432110          012368999999999999888775      


Q ss_pred             -CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccc
Q 028444           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        65 -~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                       ++|+||||||....      ..+++.+.+++|+.++.++++++.+..   +.++||++||.. +.+.+.          
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~----------  167 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL----------  167 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc----------
Confidence             48999999996321      123456789999999999999987631   236899999976 322111          


Q ss_pred             ccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                          ...|+.+|...+.+.+.++    +.|+++++++||+++||.
T Consensus       168 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          168 ----AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             ----chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence                1359999997776666554    458999999999999983

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.94  E-value=1.6e-27  Score=187.27  Aligned_cols=161  Identities=14%  Similarity=0.127  Sum_probs=124.1

Q ss_pred             EEEEEcCCCh--hHHHHHHHHHhCCCeEEEEEcCC--CCCCCCC-CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRT--SDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~--IG~~l~~~l~~~g~~V~~~~r~~--~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+  ||++++++|+++|++|++++|+.  +..+++. ...++.++++|++|.+++.++++       ++|+|
T Consensus        28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l  107 (280)
T 3nrc_A           28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAI  107 (280)
T ss_dssp             EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999955  99999999999999999999986  1111111 11358899999999999887764       57999


Q ss_pred             EEcCccCC-----------CCCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           70 FHTAALVE-----------PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        70 i~~a~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      |||||...           ...+++.+.+++|+.++.++++++.+.+  +..+||++||...+.+...            
T Consensus       108 i~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  175 (280)
T 3nrc_A          108 VHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS------------  175 (280)
T ss_dssp             EECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT------------
T ss_pred             EECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC------------
Confidence            99999753           2223456789999999999999998753  2468999999876643221            


Q ss_pred             ccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          137 YFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                        ...|+.+|++.+.+.+.    +.++|+++++++||++.++..
T Consensus       176 --~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  217 (280)
T 3nrc_A          176 --YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAA  217 (280)
T ss_dssp             --THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGG
T ss_pred             --chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhh
Confidence              14599999966666554    445689999999999999854

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.94  E-value=5.8e-27  Score=187.27  Aligned_cols=160  Identities=18%  Similarity=0.156  Sum_probs=125.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-------CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+.+..       ..++.++.+|++|.+++.++++       ++|
T Consensus        10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   89 (319)
T 3ioy_A           10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVS   89 (319)
T ss_dssp             EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred             EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCC
Confidence            69999999999999999999999999999998654332111       1268999999999999888775       579


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---------CccEEEEEccceeeccCCccccCCCcc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+         +.++||++||..++.+....       
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~-------  162 (319)
T 3ioy_A           90 ILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP-------  162 (319)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS-------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC-------
Confidence            99999996422      224566789999999999999987653         24579999998776543221       


Q ss_pred             ccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                             ..|+.||.    +++.+..++.+.|+++++++||++.+|.
T Consensus       163 -------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  202 (319)
T 3ioy_A          163 -------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI  202 (319)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence                   45999999    7777777777789999999999999874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=1.2e-25  Score=177.09  Aligned_cols=158  Identities=19%  Similarity=0.217  Sum_probs=124.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------------CCceEEEEccCCCHHHHHHHhc-----
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~~Dl~~~~~~~~~~~-----   64 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..            ..++.++++|++|.+++.++++     
T Consensus        11 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   90 (285)
T 3sc4_A           11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQ   90 (285)
T ss_dssp             EEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999998775544321            1368899999999999888775     


Q ss_pred             --CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccC-CccccCCCcc
Q 028444           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGST-DGYIADENQV  132 (209)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~-~~~~~~e~~~  132 (209)
                        ++|+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+. .+        
T Consensus        91 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--------  162 (285)
T 3sc4_A           91 FGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR--------  162 (285)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC--------
Confidence              78999999997422      223456788999999999999998775   23689999997665432 11        


Q ss_pred             ccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecC-ceec
Q 028444          133 HEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPG-VIYG  173 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~-~v~g  173 (209)
                            ...|+.+|++.+.+.+.+    .++|+++++++|| .+.+
T Consensus       163 ------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t  202 (285)
T 3sc4_A          163 ------PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT  202 (285)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc
Confidence                  145999999666665554    4568999999999 4554

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.94  E-value=2.3e-27  Score=187.67  Aligned_cols=185  Identities=17%  Similarity=0.128  Sum_probs=137.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCC--CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      |+|+||||||+||++++++|+++| ++|++++|++.+..  .+. ..+++++++|++|++++.++++++|+|||+++...
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            479999999999999999999999 99999999865421  111 13789999999999999999999999999998532


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                      ..      ..+.|+.++.++++++++. +.++||++|+..+|+...+.            +...|+.+|..+|.+++.  
T Consensus        85 ~~------~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~~~------------~~~~y~~sK~~~e~~~~~--  143 (299)
T 2wm3_A           85 SC------SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTAGR------------LAAAHFDGKGEVEEYFRD--  143 (299)
T ss_dssp             HT------CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTTTS------------CCCHHHHHHHHHHHHHHH--
T ss_pred             cc------cchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCCCc------------ccCchhhHHHHHHHHHHH--
Confidence            11      2467888999999999987 57899998887776532111            125699999999988765  


Q ss_pred             hcCCCEEEEecCceecCCCCCc-chhHHHH---HHHHhcCCceEEEEEEeeeeec
Q 028444          158 SEGLPIVPVYPGVIYGPGKLTT-GNLVAKL---VRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       .+++++++||+++||+..... ......-   ....-.++....|+|++|+|++
T Consensus       144 -~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~  197 (299)
T 2wm3_A          144 -IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPV  197 (299)
T ss_dssp             -HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHH
T ss_pred             -CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHH
Confidence             489999999999999743100 0000000   0000125566789999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.94  E-value=1.7e-27  Score=184.41  Aligned_cols=161  Identities=21%  Similarity=0.205  Sum_probs=124.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+++..  ..++.++++|++|.+++.++++       ++|+|||
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~   86 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVN   86 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            479999999999999999999999999999997654322111  1268899999999998877765       4799999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||....      ..+++++.+++|+.++.++++++.+.+.  .++||++||..++.+..+              ...|+
T Consensus        87 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  152 (253)
T 1hxh_A           87 NAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ--------------YAGYS  152 (253)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCC--------------CccHH
Confidence            9997432      2234667899999999999988765421  279999999877643221              14599


Q ss_pred             HHHHHHHHHHHHH----hhc--CCCEEEEecCceecCC
Q 028444          144 RSKAVADKIALQA----ASE--GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       144 ~sK~~~e~~~~~~----~~~--~~~~~~~rp~~v~g~~  175 (209)
                      .+|.+.+.+.+.+    .++  ++++++++||+++||.
T Consensus       153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  190 (253)
T 1hxh_A          153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence            9999777666554    345  8999999999999974

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.94  E-value=4.4e-27  Score=178.86  Aligned_cols=178  Identities=15%  Similarity=0.062  Sum_probs=134.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~~~   78 (209)
                      +++||||+|+||++++++|+++|++|++++|+..               +|++|++++.++++   ++|+||||||...+
T Consensus         8 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~   72 (223)
T 3uce_A            8 VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTAGSYAP   72 (223)
T ss_dssp             EEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            5899999999999999999999999999998754               59999999988775   68999999996521


Q ss_pred             -------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           79 -------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        79 -------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                             ..+++++.+++|+.++.++++++.+.+. ..+||++||...+.+..+              ...|+.+|++.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~~~Y~asK~a~~  138 (223)
T 3uce_A           73 AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN--------------TYVKAAINAAIE  138 (223)
T ss_dssp             CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT--------------CHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC--------------chHHHHHHHHHH
Confidence                   2234667899999999999999988742 248999999877654322              145999999888


Q ss_pred             HHHHHHhhc--CCCEEEEecCceecCCCCCc-chhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          151 KIALQAASE--GLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       151 ~~~~~~~~~--~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+.+.++..  .++++.++||++.+|..... ......+........+...+.+++|+|++
T Consensus       139 ~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  199 (223)
T 3uce_A          139 ATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMA  199 (223)
T ss_dssp             HHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHH
Confidence            887776532  39999999999999854222 12223333334444444556777887764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2e-26  Score=177.41  Aligned_cols=167  Identities=18%  Similarity=0.156  Sum_probs=124.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCC--CCCceEEEEccCCCHHHHHHHhc---------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP--SEGALELVYGDVTDYRSLVDACF---------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~---------~~d~   68 (209)
                      +++||||+|+||++++++|+++|  ++|++++|+..+.+.+.  ...++.++.+|++|.+++.++++         ++|+
T Consensus         5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~   84 (250)
T 1yo6_A            5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSL   84 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCE
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcE
Confidence            69999999999999999999999  99999999865443221  12378999999999999888776         7999


Q ss_pred             EEEcCccCC-C------CCCCccchhhhHHHHHHHHHHHHHhcC---------C-----ccEEEEEccceeeccCCcccc
Q 028444           69 IFHTAALVE-P------WLPDPSRFFAVNVEGLKNVVQAAKETK---------T-----VEKIIYTSSFFALGSTDGYIA  127 (209)
Q Consensus        69 vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~~i~~ss~~~~~~~~~~~~  127 (209)
                      ||||||... .      ..+++.+.+++|+.++.++++++.+.+         +     .++||++||...+.+....  
T Consensus        85 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--  162 (250)
T 1yo6_A           85 LINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--  162 (250)
T ss_dssp             EEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS--
T ss_pred             EEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc--
Confidence            999999754 1      123456789999999999999886542         2     4689999998766432110  


Q ss_pred             CCCccccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                       + .   ...+...|+.+|.+.+.+.+.++    ++++++++++||++.++.
T Consensus       163 -~-~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  209 (250)
T 1yo6_A          163 -G-S---AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL  209 (250)
T ss_dssp             -T-T---SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred             -c-c---ccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence             0 0   01123569999998887776654    348999999999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=3.1e-27  Score=187.13  Aligned_cols=160  Identities=19%  Similarity=0.216  Sum_probs=124.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CC---ceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EG---ALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~---~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++....     ..   ++.++.+|++|.+++.++++       ++
T Consensus        28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  107 (297)
T 1xhl_A           28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI  107 (297)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            69999999999999999999999999999998654322110     11   68899999999999887765       68


Q ss_pred             CEEEEcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccC-CccccCCCccccc
Q 028444           67 HVIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGST-DGYIADENQVHEE  135 (209)
Q Consensus        67 d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~-~~~~~~e~~~~~~  135 (209)
                      |+||||||....        ..+++++.+++|+.++.++++++.+.+.  .++||++||..++.+. .+           
T Consensus       108 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~-----------  176 (297)
T 1xhl_A          108 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG-----------  176 (297)
T ss_dssp             CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT-----------
T ss_pred             CEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCC-----------
Confidence            999999996432        1234667899999999999999876531  2699999998766432 11           


Q ss_pred             cccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                         ...|+.+|.+.+.+.+.+    .++|+++++++||++++|.
T Consensus       177 ---~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~  217 (297)
T 1xhl_A          177 ---YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  217 (297)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence               145999999776665554    4569999999999999974

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.94  E-value=2.8e-26  Score=176.34  Aligned_cols=155  Identities=16%  Similarity=0.132  Sum_probs=124.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc---------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---------~~d~vi~   71 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++..     ....++.+|++|.+++.++++         ++|+|||
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~   82 (241)
T 1dhr_A            8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC   82 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            36999999999999999999999999999999876532     146778999999998877764         6899999


Q ss_pred             cCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           72 TAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        72 ~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||....       ..+++++.+++|+.++.++++++.+.+. .++||++||..++.+..+              ...|+
T Consensus        83 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  148 (241)
T 1dhr_A           83 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG--------------MIGYG  148 (241)
T ss_dssp             CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHH
T ss_pred             cccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC--------------chHHH
Confidence            9996432       1134567899999999999999987642 258999999877643221              14599


Q ss_pred             HHHHHHHHHHHHHh------hcCCCEEEEecCceecC
Q 028444          144 RSKAVADKIALQAA------SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       144 ~sK~~~e~~~~~~~------~~~~~~~~~rp~~v~g~  174 (209)
                      .+|.+.+.+.+.++      ++|+++++++||++.++
T Consensus       149 asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~  185 (241)
T 1dhr_A          149 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP  185 (241)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc
Confidence            99998888877764      34699999999999876

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2e-26  Score=176.60  Aligned_cols=154  Identities=18%  Similarity=0.176  Sum_probs=123.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc---------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+...     ...++.+|++|.+++.++++         ++|+||||
T Consensus         5 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~   79 (236)
T 1ooe_A            5 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   79 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEEC
Confidence            69999999999999999999999999999998765321     46778999999998877664         78999999


Q ss_pred             CccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      ||....       ..+++++.+++|+.++.++++++.+.+. .++||++||..++.+..+              ...|+.
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~  145 (236)
T 1ooe_A           80 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS--------------MIGYGM  145 (236)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHHH
T ss_pred             CcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC--------------cHHHHH
Confidence            996422       1234567899999999999999987642 258999999877643211              145999


Q ss_pred             HHHHHHHHHHHHh------hcCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQAA------SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~~~------~~~~~~~~~rp~~v~g~  174 (209)
                      +|.+.+.+.+.++      ++++++++++||++++|
T Consensus       146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~  181 (236)
T 1ooe_A          146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP  181 (236)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc
Confidence            9998888877764      34699999999999986

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.94  E-value=5.6e-27  Score=182.66  Aligned_cols=160  Identities=24%  Similarity=0.244  Sum_probs=124.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++.+..     ..++.++.+|++|.+++.++++       ++|+|
T Consensus         6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   85 (264)
T 3tfo_A            6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVL   85 (264)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998654332111     1368899999999999887764       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+.              .
T Consensus        86 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~--------------~  151 (264)
T 3tfo_A           86 VNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA--------------A  151 (264)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC--------------H
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCC--------------h
Confidence            999997432      224567789999999999999887643   34689999998776433221              4


Q ss_pred             hHHHHHHHHHHHHHHHhhc--CCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAASE--GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~~~--~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|++.+.+.+.++..  ++++++++||++.++.
T Consensus       152 ~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~  188 (264)
T 3tfo_A          152 VYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL  188 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence            5999999888887776532  8999999999999874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.94  E-value=9.7e-27  Score=183.06  Aligned_cols=163  Identities=21%  Similarity=0.171  Sum_probs=125.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.++.    . ...++.++++|++|++++.++++       ++|+|
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (283)
T 3v8b_A           30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIV  109 (283)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999999986543221    1 12468899999999999877775       68999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....       ..+++++.+++|+.++.++++++.+.+   +.++||++||...+......            ..
T Consensus       110 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~------------~~  177 (283)
T 3v8b_A          110 VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTP------------GA  177 (283)
T ss_dssp             EECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCST------------TC
T ss_pred             EECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCC------------Cc
Confidence            999997422       223466789999999999999985432   34689999998765321110            12


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|++.+.+.+.++    ++|+++++++||++.+|..
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  218 (283)
T 3v8b_A          178 TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS  218 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence            459999997776665554    4689999999999998753

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=6.8e-27  Score=178.87  Aligned_cols=160  Identities=19%  Similarity=0.164  Sum_probs=117.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+.. ..++.++.+|++|.+++.++++       ++|+|||||
T Consensus         7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~A   86 (234)
T 2ehd_A            7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNA   86 (234)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            59999999999999999999999999999997654322111 1268899999999998877764       689999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++.+.+.   .+.++||++||..++.+..+              ...|+.
T Consensus        87 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~~  152 (234)
T 2ehd_A           87 GVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG--------------GAAYNA  152 (234)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT--------------CHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC--------------CchhhH
Confidence            96432      22345678999999999888776542   13579999999876643211              145999


Q ss_pred             HHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          145 SKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       145 sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      +|.+.+.+.+.    +.++|+++++++||++.++.
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  187 (234)
T 2ehd_A          153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF  187 (234)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            99966655544    44568999999999998864

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-27  Score=190.08  Aligned_cols=188  Identities=17%  Similarity=0.120  Sum_probs=134.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEE-cCCCCCCCCC------CCCceEEEEccCCCHH-----------------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGLP------SEGALELVYGDVTDYR-----------------   57 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~------~~~~~~~~~~Dl~~~~-----------------   57 (209)
                      ++|||||+|+||++++++|+++|++|++++ |+.++++.+.      ...++.++++|++|.+                 
T Consensus        48 ~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~  127 (328)
T 2qhx_A           48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT  127 (328)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHH
Confidence            699999999999999999999999999999 8754322110      1136889999999998                 


Q ss_pred             HHHHHhc-------CcCEEEEcCccCCC------C--------------CCCccchhhhHHHHHHHHHHHHHhcC---C-
Q 028444           58 SLVDACF-------GCHVIFHTAALVEP------W--------------LPDPSRFFAVNVEGLKNVVQAAKETK---T-  106 (209)
Q Consensus        58 ~~~~~~~-------~~d~vi~~a~~~~~------~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~---~-  106 (209)
                      ++.++++       ++|+||||||....      .              .+++++.+++|+.++.++++++.+.+   + 
T Consensus       128 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  207 (328)
T 2qhx_A          128 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  207 (328)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            8877765       68999999996422      1              23345679999999999999887542   2 


Q ss_pred             -----ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCC
Q 028444          107 -----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKL  177 (209)
Q Consensus       107 -----~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~~  177 (209)
                           .++||++||...+.+..+              ...|+.+|++.+.+.+.+    .++|+++++++||++.++. .
T Consensus       208 ~~~~~~g~IV~isS~~~~~~~~~--------------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~  272 (328)
T 2qhx_A          208 KHRGTNYSIINMVDAMTNQPLLG--------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  272 (328)
T ss_dssp             GGSCSCEEEEEECCTTTTSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C
T ss_pred             cCCCCCcEEEEECchhhccCCCC--------------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c
Confidence                 468999999876643221              145999999666665554    4568999999999999986 2


Q ss_pred             CcchhHHHHHHHHhcCCceE-EEEEEeeeeec
Q 028444          178 TTGNLVAKLVRLLFSQHFSL-VFFHCQITCHA  208 (209)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~  208 (209)
                      ..    ......+....+.. .++.++|+|++
T Consensus       273 ~~----~~~~~~~~~~~p~~~r~~~pedvA~~  300 (328)
T 2qhx_A          273 MP----PAVWEGHRSKVPLYQRDSSAAEVSDV  300 (328)
T ss_dssp             SC----HHHHHHHHTTCTTTTSCBCHHHHHHH
T ss_pred             cc----HHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence            21    22222222222222 45566776654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.93  E-value=2.4e-26  Score=179.17  Aligned_cols=159  Identities=15%  Similarity=0.098  Sum_probs=124.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..       ....++.++++|++|.+++.++++       ++|
T Consensus        10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   89 (265)
T 3lf2_A           10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCAS   89 (265)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCS
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999999999999999999999999999986543221       111248999999999999877764       689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+..+.             
T Consensus        90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  156 (265)
T 3lf2_A           90 ILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM-------------  156 (265)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTB-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCc-------------
Confidence            99999997422      223567789999999999999997653   24689999998766433221             


Q ss_pred             CChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecC
Q 028444          139 CTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~  174 (209)
                       ..|+.+|++.+.+.    .++.++|+++++++||++.+|
T Consensus       157 -~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  195 (265)
T 3lf2_A          157 -VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG  195 (265)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             -hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence             45999999665554    455566999999999999986

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=5.8e-27  Score=180.94  Aligned_cols=161  Identities=16%  Similarity=0.172  Sum_probs=124.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.    +....++.++.+|++|.+++.++++       ++|+|
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   86 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL   86 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            479999999999999999999999999999997543221    1111368999999999999887775       48999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---Cc-cEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..+++.+.+++|+.++.++++.+.+.+   +. ++||++||..++.+.++              .
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  152 (251)
T 1zk4_A           87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--------------L  152 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--------------C
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC--------------C
Confidence            999996422      122456789999999999888876532   23 68999999877653321              1


Q ss_pred             ChHHHHHHHHHHHHHHHh------hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA------SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~------~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.++      +.++++++++||+++||.
T Consensus       153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~  194 (251)
T 1zk4_A          153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence            459999998877766543      458999999999999974

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.93  E-value=1.3e-27  Score=187.75  Aligned_cols=171  Identities=19%  Similarity=0.165  Sum_probs=128.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (209)
                      +|+|||||||||++++++|+++  |++|++++|++.+...+.. .+++++.+|++|.+++.++++++|+|||+|+.. + 
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~-~-   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQGVEKLLLISSSE-V-   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC-c-
Confidence            5899999999999999999998  9999999998665432211 368899999999999999999999999999852 1 


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                              ..|+.++.++++++++. +.++||++||..+|..                 ..+|+.+|..+|.+++.   .
T Consensus        78 --------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-----------------~~~y~~sK~~~e~~~~~---~  128 (286)
T 2zcu_A           78 --------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTS-----------------PLGLADEHIETEKMLAD---S  128 (286)
T ss_dssp             ------------CHHHHHHHHHHHH-TCCEEEEEEETTTTTC-----------------CSTTHHHHHHHHHHHHH---H
T ss_pred             --------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC-----------------cchhHHHHHHHHHHHHH---c
Confidence                    24788999999999987 4789999999877610                 02499999999998764   5


Q ss_pred             CCCEEEEecCceecCCCCCcchhHHHHHHHH----hcCCceEEEEEEeeeeec
Q 028444          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLL----FSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       160 ~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~dva~~  208 (209)
                      +++++++||++++++..    .++...+...    ..++....++|++|+|++
T Consensus       129 ~~~~~ilrp~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  177 (286)
T 2zcu_A          129 GIVYTLLRNGWYSENYL----ASAPAALEHGVFIGAAGDGKIASATRADYAAA  177 (286)
T ss_dssp             CSEEEEEEECCBHHHHH----TTHHHHHHHTEEEESCTTCCBCCBCHHHHHHH
T ss_pred             CCCeEEEeChHHhhhhH----HHhHHhhcCCceeccCCCCccccccHHHHHHH
Confidence            89999999998776531    2233222211    123455678899998875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=3.9e-26  Score=176.83  Aligned_cols=159  Identities=19%  Similarity=0.160  Sum_probs=125.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCC--CCCCC---CCCceEEEEccCCCH-HHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSD--ISGLP---SEGALELVYGDVTDY-RSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~--~~~~~---~~~~~~~~~~Dl~~~-~~~~~~~~-------~~   66 (209)
                      ++++||||+|+||++++++|+++|++ |++++|+...  .+++.   ...++.++.+|++|. +++.++++       ++
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   85 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTV   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCC
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999997 9999997631  11110   113688999999998 77776664       78


Q ss_pred             CEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC------ccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |+||||||..  ..+++++.+++|+.++.++++++.+.+.      .++||++||..++.+..+              ..
T Consensus        86 d~lv~~Ag~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  149 (254)
T 1sby_A           86 DILINGAGIL--DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ--------------VP  149 (254)
T ss_dssp             CEEEECCCCC--CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------SH
T ss_pred             CEEEECCccC--CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC--------------ch
Confidence            9999999975  3467888999999999999999976431      257999999877643221              14


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|++.+.+.+.++    +.++++++++||++++|.
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence            59999998887776654    258999999999999873

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1.9e-27  Score=186.57  Aligned_cols=162  Identities=23%  Similarity=0.261  Sum_probs=120.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.+.       ....+.++.+|++|.+++.++++       ++|
T Consensus        34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  113 (279)
T 1xg5_A           34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD  113 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCC
Confidence            6999999999999999999999999999999754332211       01257889999999999887775       799


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHH----HhcCC-ccEEEEEccceeeccCCccccCCCcccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      +||||||....      ..+++.+.+++|+.++..+++.+    ++... .++||++||..++.....            
T Consensus       114 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~------------  181 (279)
T 1xg5_A          114 ICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL------------  181 (279)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC------------
Confidence            99999996422      12345678999999966665554    44321 269999999877632110            


Q ss_pred             ccCChHHHHHHHHHHHHHH----Hh--hcCCCEEEEecCceecCC
Q 028444          137 YFCTQYERSKAVADKIALQ----AA--SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~----~~--~~~~~~~~~rp~~v~g~~  175 (209)
                      .+...|+.+|.+.+.+.+.    +.  ..++++++++||++.++.
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  226 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  226 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence            1124599999976665544    44  458999999999999874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.93  E-value=1.6e-25  Score=175.40  Aligned_cols=162  Identities=17%  Similarity=0.150  Sum_probs=124.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------------CCceEEEEccCCCHHHHHHHhc----
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF----   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~~Dl~~~~~~~~~~~----   64 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+.+.+..            ..++.++++|++|.+++.++++    
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   86 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD   86 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            369999999999999999999999999999998765444322            1368899999999999887764    


Q ss_pred             ---CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcc
Q 028444           65 ---GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        65 ---~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                         ++|+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+...        
T Consensus        87 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------  158 (274)
T 3e03_A           87 TFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWW--------  158 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHH--------
T ss_pred             HcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC--------
Confidence               68999999997422      223466789999999999999987643   3468999999876643100        


Q ss_pred             ccccccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecC-ceecC
Q 028444          133 HEEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPG-VIYGP  174 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~-~v~g~  174 (209)
                          .....|+.||++.+.+.    .++.++|+++++++|| .+.++
T Consensus       159 ----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~  201 (274)
T 3e03_A          159 ----GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD  201 (274)
T ss_dssp             ----HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc
Confidence                01145999999555554    4555679999999999 56665

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.93  E-value=8.2e-27  Score=183.32  Aligned_cols=160  Identities=21%  Similarity=0.219  Sum_probs=122.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++++..  ..++.++++|++|.+++.++++       ++|+||||
T Consensus         7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   86 (281)
T 3zv4_A            7 VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPN   86 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            69999999999999999999999999999998654332111  1368999999999998877764       68999999


Q ss_pred             CccCCCC-------C----CCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           73 AALVEPW-------L----PDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        73 a~~~~~~-------~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||.....       .    +++++.+++|+.++.++++++.+.+  +..++|++||...+.+..+.              
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  152 (281)
T 3zv4_A           87 AGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG--------------  152 (281)
T ss_dssp             CCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC--------------
T ss_pred             CCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC--------------
Confidence            9974221       1    1256789999999999999987653  23589999998766432221              


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.||++.+.+.+.++.   .+++++.++||++.++.
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~  191 (281)
T 3zv4_A          153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL  191 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence            3599999977766665542   13999999999999974

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.93  E-value=6.3e-28  Score=187.88  Aligned_cols=159  Identities=14%  Similarity=0.148  Sum_probs=119.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC---CCC----CC-CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD---ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~---~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|....   +++    +. ...++.++++|++|.+++.++++       ++
T Consensus        13 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   92 (262)
T 3ksu_A           13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKV   92 (262)
T ss_dssp             EEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            69999999999999999999999999999875322   111    10 11368899999999999888775       68


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |+||||||....      ..+++++.+++|+.++.++++++.+.+ +.+++|++||...+.+....              
T Consensus        93 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~--------------  158 (262)
T 3ksu_A           93 DIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY--------------  158 (262)
T ss_dssp             EEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC--------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC--------------
Confidence            999999996422      224566789999999999999999864 23589999998776543222              


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|++.+.+.+.+    .++|+++++++||++.++
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (262)
T 3ksu_A          159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS  197 (262)
T ss_dssp             CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence            34999999666665554    445899999999999876

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.93  E-value=8.7e-27  Score=184.86  Aligned_cols=159  Identities=19%  Similarity=0.180  Sum_probs=124.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++++...     ...++.++++|++|.+++.++++       ++|+|
T Consensus        33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  112 (301)
T 3tjr_A           33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVV  112 (301)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            6999999999999999999999999999999865433211     11368999999999999888775       78999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||....      ..+++++.+++|+.++.++++++.+.+    ..++||++||...+.+..+              .
T Consensus       113 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  178 (301)
T 3tjr_A          113 FSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG--------------L  178 (301)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC--------------c
Confidence            999997422      234566789999999999999986542    1468999999877643322              1


Q ss_pred             ChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecC
Q 028444          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.||.+.+.+.    .++.+.|+++++++||++.++
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~  217 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK  217 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc
Confidence            45999999655554    444556899999999999987

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.93  E-value=1.4e-27  Score=186.60  Aligned_cols=161  Identities=19%  Similarity=0.231  Sum_probs=123.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCC----C-CCCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~-~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+ ...    . ....++.++.+|++|.+++.++++       ++|+
T Consensus        27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999854321 111    0 111368999999999999887775       7899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||....      ..+++++.+++|+.++.++++.+.+.+   +.++||++||...+.+..+.              
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  172 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQ--------------  172 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB--------------
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCc--------------
Confidence            9999997532      223466789999999999999886532   34689999998766443221              


Q ss_pred             ChHHHHHHHHHHHH----HHHhhcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIA----LQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.+|++.+.+.    .++.++|+++++++||++.++..
T Consensus       173 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  213 (269)
T 3gk3_A          173 ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV  213 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence            45999999555554    44555689999999999998743

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.93  E-value=2.8e-27  Score=186.86  Aligned_cols=160  Identities=19%  Similarity=0.193  Sum_probs=123.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEE-cCCCCCCCC------CCCCceEEEEccCCCHH-----------------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGL------PSEGALELVYGDVTDYR-----------------   57 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~-r~~~~~~~~------~~~~~~~~~~~Dl~~~~-----------------   57 (209)
                      +++||||+|+||++++++|+++|++|++++ |+.++.+.+      ....++.++++|++|.+                 
T Consensus        11 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   90 (291)
T 1e7w_A           11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   90 (291)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHH
Confidence            699999999999999999999999999999 875432211      01136889999999998                 


Q ss_pred             HHHHHhc-------CcCEEEEcCccCCC------C--------------CCCccchhhhHHHHHHHHHHHHHhcC---C-
Q 028444           58 SLVDACF-------GCHVIFHTAALVEP------W--------------LPDPSRFFAVNVEGLKNVVQAAKETK---T-  106 (209)
Q Consensus        58 ~~~~~~~-------~~d~vi~~a~~~~~------~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~---~-  106 (209)
                      ++.++++       ++|+||||||....      .              .+++++.+++|+.++.++++++.+.+   + 
T Consensus        91 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~  170 (291)
T 1e7w_A           91 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  170 (291)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            8877765       68999999996422      1              23355789999999999999987542   2 


Q ss_pred             -----ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          107 -----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       107 -----~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                           .++||++||...+.+..+              ...|+.+|+..+.+.+.    +.++|++++.++||++.++.
T Consensus       171 ~~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          171 KHRGTNYSIINMVDAMTNQPLLG--------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             GGSCSCEEEEEECCTTTTSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             CCCCCCcEEEEEechhhcCCCCC--------------CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence                 368999999876643221              14599999966655544    45568999999999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.93  E-value=3.5e-27  Score=185.33  Aligned_cols=159  Identities=20%  Similarity=0.204  Sum_probs=121.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc------CcCEEEEc-
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF------GCHVIFHT-   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~~-   72 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.+..  ..++.++++|++|.+++.++++      ++|++||| 
T Consensus        32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~a  111 (281)
T 3ppi_A           32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAH  111 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEcc
Confidence            59999999999999999999999999999998654332111  1368999999999999888775      57999999 


Q ss_pred             CccCCC-----------CCCCccchhhhHHHHHHHHHHHHHhcC---------CccEEEEEccceeeccCCccccCCCcc
Q 028444           73 AALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        73 a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                      |+....           ..+++.+.+++|+.++.++++++.+..         +..+||++||...+.+..+        
T Consensus       112 ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  183 (281)
T 3ppi_A          112 GGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG--------  183 (281)
T ss_dssp             CCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT--------
T ss_pred             CcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC--------
Confidence            544211           112356789999999999999886532         2358999999877644322        


Q ss_pred             ccccccCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecC
Q 028444          133 HEEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                            ...|+.+|++.+.+    ..++.++|+++++++||++.++
T Consensus       184 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~  223 (281)
T 3ppi_A          184 ------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTP  223 (281)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             ------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCch
Confidence                  14599999955554    4555556899999999999986

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.93  E-value=7.2e-27  Score=180.88  Aligned_cols=159  Identities=21%  Similarity=0.182  Sum_probs=122.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccC--CCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDV--TDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl--~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.++...      ..++.++.+|+  +|.+++.++++       ++
T Consensus        14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   93 (252)
T 3f1l_A           14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRL   93 (252)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCC
Confidence            69999999999999999999999999999998654332211      02678999999  89988877764       68


Q ss_pred             CEEEEcCccCC---C----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           67 HVIFHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        67 d~vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      |+||||||...   +    ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+            
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------  161 (252)
T 3f1l_A           94 DGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN------------  161 (252)
T ss_dssp             SEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC------------
Confidence            99999999742   1    123456789999999999999986532   3468999999876543221            


Q ss_pred             ccCChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecC
Q 028444          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGP  174 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~  174 (209)
                        ...|+.+|++.+.+.+.++..   .++++.+.||++.++
T Consensus       162 --~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~  200 (252)
T 3f1l_A          162 --WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA  200 (252)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc
Confidence              145999999777776665421   399999999999875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=6.2e-27  Score=183.62  Aligned_cols=190  Identities=15%  Similarity=0.057  Sum_probs=132.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.+..     ..++.++++|++|.+++.++++       ++|+|
T Consensus        36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l  115 (279)
T 3ctm_A           36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVF  115 (279)
T ss_dssp             EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998654322110     1368899999999999888775       38999


Q ss_pred             EEcCccCCC---C-----CCCccchhhhHHHHHHHHHHHH----HhcCCccEEEEEccceeeccCCccccCCCccccccc
Q 028444           70 FHTAALVEP---W-----LPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        70 i~~a~~~~~---~-----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |||||....   .     .+++.+.+++|+.++..+++.+    ++. +.++||++||..++.+...            .
T Consensus       116 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~------------~  182 (279)
T 3ctm_A          116 VANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIVNIP------------Q  182 (279)
T ss_dssp             EECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC---------------C
T ss_pred             EECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccCCCC------------C
Confidence            999997532   1     1234568999999976665555    433 3579999999876532100            0


Q ss_pred             cCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       138 ~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +...|+.+|.+.+.+.+.++    +++ ++++++||++.++.......   .....+....+...+++++|+|++
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~p~~~~~~~~dvA~~  253 (279)
T 3ctm_A          183 LQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASK---DMKAKWWQLTPLGREGLTQELVGG  253 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCH---HHHHHHHHHSTTCSCBCGGGTHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccCh---HHHHHHHHhCCccCCcCHHHHHHH
Confidence            12459999998888777664    347 99999999999985421111   111111111222346778888764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=1.7e-26  Score=178.56  Aligned_cols=159  Identities=16%  Similarity=0.168  Sum_probs=119.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...        ...++.++.+|++|.+++.++++       ++
T Consensus         9 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (250)
T 3nyw_A            9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAV   88 (250)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            6999999999999999999999999999999865432211        11368899999999999877764       68


Q ss_pred             CEEEEcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           67 HVIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        67 d~vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |+||||||....     ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+              
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  154 (250)
T 3nyw_A           89 DILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD--------------  154 (250)
T ss_dssp             EEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC--------------
T ss_pred             CEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC--------------
Confidence            999999997422     123456789999999999999986532   3468999999876542211              


Q ss_pred             CChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecC
Q 028444          139 CTQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~----~~~~~~~~~~~~rp~~v~g~  174 (209)
                      ...|+.+|++.+.+.+    ++.++|++++.++||++.++
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  194 (250)
T 3nyw_A          155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD  194 (250)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence            1469999996665554    44556999999999999875

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.93  E-value=1.1e-25  Score=177.04  Aligned_cols=161  Identities=18%  Similarity=0.172  Sum_probs=124.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCC----CC-CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|++++|+..+ .+.    +. ...++.++.+|++|.+++.++++       ++|
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD  109 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLD  109 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            369999999999999999999999999999997642 111    10 11368899999999998877664       689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      +||||||....      ..+++++.+++|+.++.++++++.+.+ +.++||++||...+....+             ...
T Consensus       110 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~  176 (283)
T 1g0o_A          110 IVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP-------------KHA  176 (283)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS-------------SCH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC-------------CCc
Confidence            99999997432      224567789999999999999998874 3469999999765532211             124


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 028444          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~  174 (209)
                      .|+.+|.+.+.+.+.+    .++|+++++++||+++++
T Consensus       177 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  214 (283)
T 1g0o_A          177 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  214 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence            5999999766665554    456999999999999987

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=6e-26  Score=177.54  Aligned_cols=161  Identities=14%  Similarity=0.067  Sum_probs=124.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            36999999999999999999999999999999764332111     01368999999999998877765       6899


Q ss_pred             EEEcCccCCCC------CCCccchhhhHHHHHHHHHHHHHhc---CCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||||||.....      .+++.+.+++|+.++.++++++.+.   .+.++||++||..++.+..+              .
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  177 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF--------------L  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH--------------H
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC--------------c
Confidence            99999974321      1345678999999999999888653   23579999999887653211              1


Q ss_pred             ChHHHHHHHHHHHHHHHh-------hcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAA-------SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~-------~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|.+.+.+.+.++       +.++++++++||++.++.
T Consensus       178 ~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~  220 (272)
T 1yb1_A          178 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  220 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence            459999998877766653       238999999999999874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.93  E-value=3.4e-26  Score=180.32  Aligned_cols=161  Identities=17%  Similarity=0.175  Sum_probs=123.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCC------CCCCceEEEEccCCC----HHHHHHHhc-----
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL------PSEGALELVYGDVTD----YRSLVDACF-----   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~------~~~~~~~~~~~Dl~~----~~~~~~~~~-----   64 (209)
                      ++++||||+|+||++++++|+++|++|++++|+. ++.+.+      ....++.++++|++|    .+++.++++     
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            3699999999999999999999999999999986 432111      011368899999999    888877664     


Q ss_pred             --CcCEEEEcCccCCC--C-----C---------CCccchhhhHHHHHHHHHHHHHhcCC---------ccEEEEEccce
Q 028444           65 --GCHVIFHTAALVEP--W-----L---------PDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFF  117 (209)
Q Consensus        65 --~~d~vi~~a~~~~~--~-----~---------~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~ss~~  117 (209)
                        ++|+||||||....  .     .         +++++.+++|+.++.++++++.+.+.         ..+||++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence              68999999997422  1     1         23456799999999999999987542         35899999987


Q ss_pred             eeccCCccccCCCccccccccCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecCC
Q 028444          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       118 ~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ++.+..+              ...|+.+|++.+.+    ..++.++|+++++++||++++|.
T Consensus       184 ~~~~~~~--------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          184 VDQPCMA--------------FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             TTSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             ccCCCCC--------------CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            6643221              14599999855554    44555569999999999999986

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.93  E-value=3.5e-26  Score=178.88  Aligned_cols=161  Identities=18%  Similarity=0.202  Sum_probs=124.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhcC-------cCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG-------CHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~-------~d~v   69 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++.+    ....++.++++|++|.+++.++++.       +|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3699999999999999999999999999999986543221    1113688999999999999888754       5999


Q ss_pred             EEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---Ccc-EEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVE-KIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~-~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....       ..+++++.+++|+.++.++++++.+.+   +.+ +||++||...+.+..+              
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~--------------  167 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG--------------  167 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT--------------
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC--------------
Confidence            999997431       123466789999999999999886532   345 9999999876643211              


Q ss_pred             CChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                      ...|+.+|.+.+.+.+.++    ++|+++++++||++.++.
T Consensus       168 ~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~  208 (272)
T 2nwq_A          168 SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF  208 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred             CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence            1459999998888877765    358999999999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.93  E-value=6.1e-25  Score=172.24  Aligned_cols=161  Identities=19%  Similarity=0.168  Sum_probs=123.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-------------CC-----CCCCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------------GL-----PSEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-------------~~-----~~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      +++||||+|+||++++++|+++|++|++++|+.....             +.     ....++.++.+|++|.+++.+++
T Consensus        13 ~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (277)
T 3tsc_A           13 VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVV   92 (277)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            6999999999999999999999999999998532110             00     01136889999999999988776


Q ss_pred             c-------CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccc
Q 028444           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYI  126 (209)
Q Consensus        64 ~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~  126 (209)
                      +       ++|+||||||....      ..+++++.+++|+.++.++++++.+.+    ...+||++||...+.+.... 
T Consensus        93 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  171 (277)
T 3tsc_A           93 DDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFM-  171 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSC-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCc-
Confidence            4       58999999997532      224567789999999999999876542    23589999998776433221 


Q ss_pred             cCCCccccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC
Q 028444          127 ADENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~~  176 (209)
                                   ..|+.+|++.+.+.+.    +.++|+++++++||++.+|..
T Consensus       172 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  212 (277)
T 3tsc_A          172 -------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG  212 (277)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGG
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcc
Confidence                         4599999966655554    455689999999999999853

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.93  E-value=2.2e-25  Score=177.96  Aligned_cols=160  Identities=17%  Similarity=0.170  Sum_probs=123.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC--CCC---------------CCCceEEEEccCCCHHHHHHHhc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLP---------------SEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~---------------~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.....  ...               ...++.++++|++|++++.++++
T Consensus        48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  127 (317)
T 3oec_A           48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD  127 (317)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            6999999999999999999999999999988632211  000               01368899999999999888775


Q ss_pred             -------CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCcccc
Q 028444           65 -------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIA  127 (209)
Q Consensus        65 -------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~  127 (209)
                             ++|+||||||....      ..+++++.+++|+.++.++++++.+.+    ...+||++||...+.+..+.  
T Consensus       128 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~--  205 (317)
T 3oec_A          128 EALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQ--  205 (317)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTB--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCC--
Confidence                   68999999997432      224567789999999999999986643    23579999998776433221  


Q ss_pred             CCCccccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          128 DENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                                  ..|+.+|++.+.+.+.    +.++|+++++++||++++|.
T Consensus       206 ------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          206 ------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence                        4599999966655554    44569999999999999873

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.2e-25  Score=180.04  Aligned_cols=161  Identities=25%  Similarity=0.250  Sum_probs=121.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-----CCC-----CCCceEEEEccCCCHHHHHHHhc-------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLP-----SEGALELVYGDVTDYRSLVDACF-------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------   64 (209)
                      +++||||+|+||++++++|+++|++|++++|+.....     .+.     ...++.++++|++|.+++.++++       
T Consensus         7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g   86 (324)
T 3u9l_A            7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDG   86 (324)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            6999999999999999999999999999998742111     000     01368999999999999988776       


Q ss_pred             CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccc
Q 028444           65 GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        65 ~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      ++|+||||||....      ..+++++.+++|+.++.++++++.+.+   +.+++|++||...+....+           
T Consensus        87 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~-----------  155 (324)
T 3u9l_A           87 RIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP-----------  155 (324)
T ss_dssp             CCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS-----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC-----------
Confidence            79999999996421      224566789999999999999995432   3578999999876632211           


Q ss_pred             cccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                        ....|+.||.+.+.+.+.+    .++|+++++++||.+.++.
T Consensus       156 --~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          156 --YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             --cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence              0145999999777666554    4468999999999998653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.93  E-value=1.1e-25  Score=175.36  Aligned_cols=165  Identities=17%  Similarity=0.150  Sum_probs=127.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHHHHhc---------
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACF---------   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~---------   64 (209)
                      ++++||||+|+||++++++|+++|   ++|++++|+..+.+.+..    ..++.++.+|++|.+++.++++         
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~  101 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ  101 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence            379999999999999999999999   999999998765432111    1368999999999999888776         


Q ss_pred             CcCEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---------C-----ccEEEEEccceeeccCC
Q 028444           65 GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---------T-----VEKIIYTSSFFALGSTD  123 (209)
Q Consensus        65 ~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~~i~~ss~~~~~~~~  123 (209)
                      ++|+||||||...+       ..+++.+.+++|+.++.++++++.+.+         +     .++||++||..++....
T Consensus       102 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  181 (267)
T 1sny_A          102 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN  181 (267)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC
T ss_pred             CccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCC
Confidence            79999999997541       123456789999999999999987642         1     36899999987765422


Q ss_pred             ccccCCCccccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          124 GYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       124 ~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..           .+...|+.+|.+.+.+.+.++    ++++++++++||++.++..
T Consensus       182 ~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  227 (267)
T 1sny_A          182 TD-----------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  227 (267)
T ss_dssp             CS-----------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             CC-----------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC
Confidence            10           012459999998887776654    4589999999999988743

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1.9e-25  Score=174.12  Aligned_cols=158  Identities=18%  Similarity=0.154  Sum_probs=123.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC---CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS---EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~---~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++...    +..   ..++.++.+|++|++++.++++       ++|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (267)
T 2gdz_A            9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD   88 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999999997543211    111   1368899999999999887765       479


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC------ccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      +||||||...  .+++++.+++|+.++..+++.+.+.+.      .++||++||..++.+..+              ...
T Consensus        89 ~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  152 (267)
T 2gdz_A           89 ILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ--------------QPV  152 (267)
T ss_dssp             EEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------CHH
T ss_pred             EEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC--------------Cch
Confidence            9999999753  467888999999998888777654321      468999999877653221              135


Q ss_pred             HHHHHHHHHHHHHH------HhhcCCCEEEEecCceecCC
Q 028444          142 YERSKAVADKIALQ------AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~~~e~~~~~------~~~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|.+.+.+.+.      +.+.|+++++++||++.+|.
T Consensus       153 Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence            99999988777654      34568999999999999873

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.3e-26  Score=180.70  Aligned_cols=160  Identities=19%  Similarity=0.141  Sum_probs=122.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.....      ..+.++++|++|.+++.++++       ++|+
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  114 (281)
T 4dry_A           35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDL  114 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999999986543321110      125899999999999887764       5799


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC-----CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ||||||....       ..+++++.+++|+.++.++++++.+.+     +.++||++||...+.+..+            
T Consensus       115 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------------  182 (281)
T 4dry_A          115 LVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN------------  182 (281)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT------------
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC------------
Confidence            9999997422       224566789999999999999887643     1358999999876543221            


Q ss_pred             ccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          137 YFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                        ...|+.+|++.+.+.+.    +.++++++++++||++.++.
T Consensus       183 --~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  223 (281)
T 4dry_A          183 --SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM  223 (281)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--
T ss_pred             --ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh
Confidence              14599999966655544    45579999999999999873

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.93  E-value=5.9e-26  Score=173.79  Aligned_cols=160  Identities=16%  Similarity=0.104  Sum_probs=125.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+...      ...++.++++|++|.+++.++++       ++|+
T Consensus         4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (235)
T 3l77_A            4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV   83 (235)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999999999865432211      11368999999999999988876       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||||....      ..+++++.+++|+.++.++++++.+.+  +..++|++||...+...+.              ..
T Consensus        84 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~~  149 (235)
T 3l77_A           84 VVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY--------------GG  149 (235)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT--------------CH
T ss_pred             EEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC--------------cc
Confidence            9999997422      224566789999999999999997643  2357888887655432211              13


Q ss_pred             hHHHHHHHHHHHHHHHh--hcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQAA--SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~--~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|++.+.+.+.+.  ..++++++++||++.++.
T Consensus       150 ~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~  186 (235)
T 3l77_A          150 GYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYF  186 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSST
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccc
Confidence            59999999998888764  458999999999999864

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.93  E-value=1.8e-25  Score=173.18  Aligned_cols=167  Identities=16%  Similarity=0.095  Sum_probs=119.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcC----cCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG----CHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~vi~~a~~~   76 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.       . +++|++|.+++.+++++    +|+||||||..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            269999999999999999999999999999998765432       1 56899999999988854    59999999975


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCC-----ccc---------cccccC
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADEN-----QVH---------EEKYFC  139 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~-----~~~---------~~~~~~  139 (209)
                      .. ...+++.+++|+.++.++++++.+.+   +.++||++||..++......+..+.     ...         .+..+.
T Consensus        74 ~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           74 PQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             TT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             CC-cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence            42 24578899999999999999987542   3479999999887732111000000     000         011123


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC
Q 028444          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~~  176 (209)
                      ..|+.||.+.+.+.+.++    ++|+++++++||.++++..
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  193 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL  193 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccc
Confidence            569999998777766553    4689999999999999853

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.93  E-value=1.6e-26  Score=178.16  Aligned_cols=159  Identities=19%  Similarity=0.189  Sum_probs=121.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCceEEEEccC--CCHHHHHHHhc-------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDV--TDYRSLVDACF-------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~Dl--~~~~~~~~~~~-------~~   66 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+...      ...++.++.+|+  +|.+++.++++       ++
T Consensus        16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~i   95 (247)
T 3i1j_A           16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRL   95 (247)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999999999999865432211      012567777777  89888877664       68


Q ss_pred             CEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      |+||||||...+       ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+            
T Consensus        96 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  163 (247)
T 3i1j_A           96 DGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN------------  163 (247)
T ss_dssp             SEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC------------
Confidence            999999997422       223567789999999999999996542   3468999999876543221            


Q ss_pred             ccCChHHHHHHHHHHHHHHHh----h-cCCCEEEEecCceecC
Q 028444          137 YFCTQYERSKAVADKIALQAA----S-EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~----~-~~~~~~~~rp~~v~g~  174 (209)
                        ...|+.+|++.+.+.+.++    . .+++++.++||++.++
T Consensus       164 --~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~  204 (247)
T 3i1j_A          164 --WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG  204 (247)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred             --cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence              1459999997776665543    3 5799999999999875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.92  E-value=1.3e-26  Score=179.47  Aligned_cols=161  Identities=16%  Similarity=0.179  Sum_probs=122.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC-CCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-----------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLP-----SEGALELVYGDVTDYRSLVDACF-----------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-----------   64 (209)
                      +++||||+|+||++++++|+++|++|++++++ .++.++..     ...++.++.+|++|.+++..+++           
T Consensus         9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A            9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            69999999999999999999999999987544 33221110     11368899999999988877664           


Q ss_pred             --CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccc
Q 028444           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                        ++|+||||||....      ..+++++.+++|+.++.++++++.+.+. ..+||++||...+.+.+..          
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  158 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF----------  158 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTB----------
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCc----------
Confidence              28999999997422      2234567899999999999999987642 3589999998766433221          


Q ss_pred             cccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCC
Q 028444          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~~  176 (209)
                          ..|+.+|++.+.+.+.+    .++++++++++||++.++..
T Consensus       159 ----~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  199 (255)
T 3icc_A          159 ----IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMN  199 (255)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSS
T ss_pred             ----chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccch
Confidence                45999999766665544    45689999999999999854

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.92  E-value=1.6e-25  Score=179.43  Aligned_cols=160  Identities=21%  Similarity=0.132  Sum_probs=123.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----------CCCceEEEEccCCCHHHHHHHhcC-----
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----------SEGALELVYGDVTDYRSLVDACFG-----   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~-----   65 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+...           ...++.++.+|++|.+++.++++.     
T Consensus         4 ~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g~   83 (327)
T 1jtv_A            4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (327)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcCC
Confidence            6999999999999999999999999999988755433211           013689999999999999988864     


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      +|+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+...            
T Consensus        84 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~------------  151 (327)
T 1jtv_A           84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF------------  151 (327)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT------------
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC------------
Confidence            8999999996421      223466789999999999999975432   3579999999876543211            


Q ss_pred             ccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 028444          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v~g~~  175 (209)
                        ...|+.||++.+.+.+.++    ++|+++++++||++.++.
T Consensus       152 --~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          152 --NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             --ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence              1459999997776665553    469999999999999875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.92  E-value=1.1e-25  Score=175.69  Aligned_cols=192  Identities=14%  Similarity=0.096  Sum_probs=134.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh-CCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|++ +|++|++++|+..+.+...     ...++.++.+|++|.+++..+++       ++|
T Consensus         5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A            5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3799999999999999999999 9999999999754322110     01368899999999999888776       799


Q ss_pred             EEEEcCccCCCC------CCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCc-----------cccCC
Q 028444           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDG-----------YIADE  129 (209)
Q Consensus        68 ~vi~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~-----------~~~~e  129 (209)
                      +||||||.....      .+++++.+++|+.++.++++++.+.+. .++||++||..++.+...           ....|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            999999974321      134567899999999999999988742 258999999877642110           00111


Q ss_pred             Ccc----------------ccccccCChHHHHHHHHHHHHHHHh----h----cCCCEEEEecCceecCCCC----Ccch
Q 028444          130 NQV----------------HEEKYFCTQYERSKAVADKIALQAA----S----EGLPIVPVYPGVIYGPGKL----TTGN  181 (209)
Q Consensus       130 ~~~----------------~~~~~~~~~Y~~sK~~~e~~~~~~~----~----~~~~~~~~rp~~v~g~~~~----~~~~  181 (209)
                      +.+                .....+...|+.+|.+.+.+.+.++    +    .++++++++||++.++...    ...+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~  244 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPE  244 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHH
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCccccCChh
Confidence            100                0011123679999987776665543    3    5899999999999987532    2234


Q ss_pred             hHHHHHHHHhc
Q 028444          182 LVAKLVRLLFS  192 (209)
Q Consensus       182 ~~~~~~~~~~~  192 (209)
                      .+...+..+..
T Consensus       245 ~~a~~~~~l~~  255 (276)
T 1wma_A          245 EGAETPVYLAL  255 (276)
T ss_dssp             HHTHHHHHHHS
T ss_pred             HhhhhHhhhhc
Confidence            44444544443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.92  E-value=6.8e-26  Score=176.63  Aligned_cols=192  Identities=16%  Similarity=0.005  Sum_probs=137.0

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCCC-CC----CC--CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LP--SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~----~~--~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      +++||||+  |+||++++++|+++|++|++++|+..+. ++    +.  ...++.++++|++|.+++.++++       +
T Consensus        22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            69999999  8999999999999999999999876543 11    00  01368899999999999887765       5


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      +|+||||||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+......           
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  170 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ-----------  170 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS-----------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC-----------
Confidence            7999999997432      223466789999999999999985432   34699999997665332110           


Q ss_pred             ccCChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ....|+.+|++.+.+.+.++..   .++++.+.||++.++.....   .......+....+...+.+++|+|++
T Consensus       171 -~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~r~~~~~dva~~  241 (267)
T 3gdg_A          171 -EQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---PKETQQLWHSMIPMGRDGLAKELKGA  241 (267)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---CHHHHHHHHTTSTTSSCEETHHHHHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---CHHHHHHHHhcCCCCCCcCHHHHHhH
Confidence             1245999999888777766521   38999999999998753211   12222333334444456667777654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.92  E-value=3.5e-24  Score=172.77  Aligned_cols=160  Identities=18%  Similarity=0.156  Sum_probs=124.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------------CCceEEEEccCCCHHHHHHHhc-----
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------------~~~~~~~~~Dl~~~~~~~~~~~-----   64 (209)
                      ++|||||+|+||++++++|+++|++|++++|+..+.+.+..            ..++.++++|++|++++.++++     
T Consensus        47 ~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~  126 (346)
T 3kvo_A           47 TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKK  126 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999998776443221            1368899999999999888775     


Q ss_pred             --CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccc
Q 028444           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (209)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~  133 (209)
                        ++|+||||||....      ..+++++++++|+.++.++++++.+.+   +..+||++||...+.+....        
T Consensus       127 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~--------  198 (346)
T 3kvo_A          127 FGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK--------  198 (346)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC--------
Confidence              78999999997422      223456789999999999999997653   34689999998766431100        


Q ss_pred             cccccCChHHHHHHHHHHHHHHHhh---cCCCEEEEecCc-eec
Q 028444          134 EEKYFCTQYERSKAVADKIALQAAS---EGLPIVPVYPGV-IYG  173 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~~~---~~~~~~~~rp~~-v~g  173 (209)
                          ....|+.+|+..+.+.+.++.   .+++++.+.||+ +.+
T Consensus       199 ----~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T  238 (346)
T 3kvo_A          199 ----QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT  238 (346)
T ss_dssp             ----SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc
Confidence                124599999977766665542   589999999996 554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.92  E-value=1.8e-26  Score=178.82  Aligned_cols=159  Identities=16%  Similarity=0.139  Sum_probs=113.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHHH----HhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVD----ACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~----~~~~~d~vi~~   72 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+..    ..++..+  |..+.+.+.+    .+.++|+||||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            169999999999999999999999999999998654322110    0123333  5555443322    22479999999


Q ss_pred             CccC-CC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           73 AALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        73 a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ||.. ..      ..+++++.+++|+.++.++++++.+.+   +.++||++||..++.+..+              ...|
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  145 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE--------------LSTY  145 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT--------------CHHH
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC--------------chHH
Confidence            9975 21      123456789999999999999886542   2469999999876643211              1459


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       143 ~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+|.+.+.+.+.+    .++|+++++++||+++||.
T Consensus       146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~  182 (254)
T 1zmt_A          146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED  182 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence            99999776665554    4568999999999996654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.92  E-value=2e-25  Score=173.34  Aligned_cols=159  Identities=19%  Similarity=0.249  Sum_probs=124.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHh---CCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------
Q 028444            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------   64 (209)
                      +++||||+|+||++++++|++   +|++|++++|+.++.+.+.       ...++.++++|++|++++.++++       
T Consensus         8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   87 (259)
T 1oaa_A            8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccc
Confidence            699999999999999999999   8999999999865432211       01358899999999998877653       


Q ss_pred             --CcC--EEEEcCccCCC---------CCCCccchhhhHHHHHHHHHHHHHhcCC-----ccEEEEEccceeeccCCccc
Q 028444           65 --GCH--VIFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYI  126 (209)
Q Consensus        65 --~~d--~vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~i~~ss~~~~~~~~~~~  126 (209)
                        ++|  +||||||....         ..+++++.+++|+.++.++++++.+.+.     .++||++||..++.+..+  
T Consensus        88 ~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  165 (259)
T 1oaa_A           88 PEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG--  165 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT--
T ss_pred             cccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCC--
Confidence              358  99999997422         2234667899999999999999987652     257999999877643221  


Q ss_pred             cCCCccccccccCChHHHHHHHHHHHHHHHhhc--CCCEEEEecCceecC
Q 028444          127 ADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYGP  174 (209)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~rp~~v~g~  174 (209)
                                  ...|+.+|++.+.+.+.++..  +++++.++||++.++
T Consensus       166 ------------~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  203 (259)
T 1oaa_A          166 ------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence                        145999999888888877532  599999999999876

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.91  E-value=1.5e-25  Score=179.33  Aligned_cols=158  Identities=21%  Similarity=0.210  Sum_probs=120.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC----------CCCCCCC-----CCCceEEEEccCCCHHHHHHHhc--
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT----------SDISGLP-----SEGALELVYGDVTDYRSLVDACF--   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~----------~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~--   64 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.          +..+...     ...++.++++|++|.+++.++++  
T Consensus        29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  108 (322)
T 3qlj_A           29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTA  108 (322)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            599999999999999999999999999999872          1111000     01368899999999999887775  


Q ss_pred             -----CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC---------ccEEEEEccceeeccCCc
Q 028444           65 -----GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDG  124 (209)
Q Consensus        65 -----~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~i~~ss~~~~~~~~~  124 (209)
                           ++|+||||||....      ..+++++.+++|+.++.++++++.+.+.         ..+||++||...+.+..+
T Consensus       109 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  188 (322)
T 3qlj_A          109 VETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG  188 (322)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTT
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCC
Confidence                 78999999997532      2345677899999999999998865431         158999999877644322


Q ss_pred             cccCCCccccccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecC
Q 028444          125 YIADENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       125 ~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~  174 (209)
                      .              ..|+.+|++.+.+.+.    ++++|+++++++|| +.++
T Consensus       189 ~--------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~  227 (322)
T 3qlj_A          189 Q--------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR  227 (322)
T ss_dssp             C--------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred             C--------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence            1              3599999966665554    44579999999999 6655

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.91  E-value=2.7e-25  Score=176.38  Aligned_cols=174  Identities=18%  Similarity=0.161  Sum_probs=125.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CC--CCCceEEEEccCCCH-HHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDY-RSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~~Dl~~~-~~~~~~~~-------~~d   67 (209)
                      +++||||+|+||++++++|+++|++|++++|+..+.+.    +.  ...++.++.+|++|. +.+..+++       ++|
T Consensus        14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD   93 (311)
T 3o26_A           14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLD   93 (311)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCC
Confidence            69999999999999999999999999999998653221    11  113689999999997 77666553       799


Q ss_pred             EEEEcCccCCC------------------------------------CCCCccchhhhHHHHHHHHHHHHHhcC---Ccc
Q 028444           68 VIFHTAALVEP------------------------------------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVE  108 (209)
Q Consensus        68 ~vi~~a~~~~~------------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~  108 (209)
                      +||||||....                                    ..+++++.+++|+.++.++++++.+.+   +.+
T Consensus        94 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~  173 (311)
T 3o26_A           94 ILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP  173 (311)
T ss_dssp             EEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC
T ss_pred             EEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCC
Confidence            99999997521                                    112345679999999999999987642   346


Q ss_pred             EEEEEccceeeccCCccc------cCCC-----------------------ccccccccCChHHHHHHHHHHHHHHHhhc
Q 028444          109 KIIYTSSFFALGSTDGYI------ADEN-----------------------QVHEEKYFCTQYERSKAVADKIALQAASE  159 (209)
Q Consensus       109 ~~i~~ss~~~~~~~~~~~------~~e~-----------------------~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  159 (209)
                      +||++||...+.......      .++.                       ...........|+.||++.+.+.+.+++.
T Consensus       174 ~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e  253 (311)
T 3o26_A          174 RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANK  253 (311)
T ss_dssp             EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhh
Confidence            999999987654321000      0000                       00000012256999999999998888643


Q ss_pred             --CCCEEEEecCceecCC
Q 028444          160 --GLPIVPVYPGVIYGPG  175 (209)
Q Consensus       160 --~~~~~~~rp~~v~g~~  175 (209)
                        ++++++++||++.++.
T Consensus       254 ~~~i~v~~v~PG~v~T~~  271 (311)
T 3o26_A          254 IPKFQVNCVCPGLVKTEM  271 (311)
T ss_dssp             CTTSEEEEECCCSBCSGG
T ss_pred             cCCceEEEecCCceecCC
Confidence              6999999999999874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.91  E-value=1.4e-24  Score=169.45  Aligned_cols=158  Identities=15%  Similarity=0.074  Sum_probs=121.6

Q ss_pred             EEEEEcC--CChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCCC--CCceEEEEccCCCHHHHHHHhc----------Cc
Q 028444            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPS--EGALELVYGDVTDYRSLVDACF----------GC   66 (209)
Q Consensus         2 ~ilItG~--~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----------~~   66 (209)
                      +++||||  +|+||++++++|+++|++|++++|+..+. +.+..  ..++.++++|++|++++.++++          ++
T Consensus         9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~i   88 (269)
T 2h7i_A            9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKL   88 (269)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCE
T ss_pred             EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCc
Confidence            5999999  99999999999999999999999976431 11111  1257889999999999887775          78


Q ss_pred             CEEEEcCccCC-------C----CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCcccc
Q 028444           67 HVIFHTAALVE-------P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        67 d~vi~~a~~~~-------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      |+||||||...       +    ..+++++.+++|+.++.++++++.+.+. .++||++||...++..            
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~------------  156 (269)
T 2h7i_A           89 DGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP------------  156 (269)
T ss_dssp             EEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT------------
T ss_pred             eEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC------------
Confidence            99999999653       1    1234567899999999999999987642 2589999986543210            


Q ss_pred             ccccCChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecC
Q 028444          135 EKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~  174 (209)
                         ....|+.+|+..+.+.+.    +.++|+++++++||++.++
T Consensus       157 ---~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (269)
T 2h7i_A          157 ---AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  197 (269)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence               114599999976665554    4456999999999999886

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.91  E-value=6.4e-25  Score=177.12  Aligned_cols=178  Identities=15%  Similarity=0.177  Sum_probs=131.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-CCC-----CCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLP-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~-----~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |+|+||||||+||++|+++|+++|++|++++|++.... ...     ...+++++.+|++|.+++.++++  ++|+|||+
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            47999999999999999999999999999999763210 000     01379999999999999999999  99999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHH
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  152 (209)
                      |+.             .|+.++.++++++++.+.+++||+ |   .|+..    .+|..+.+   +.+.|+.+|..+|.+
T Consensus        91 a~~-------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~~~~~---p~~~y~~sK~~~e~~  146 (346)
T 3i6i_A           91 VGG-------------ESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRADPVE---PGLNMYREKRRVRQL  146 (346)
T ss_dssp             CCG-------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTCCCCT---THHHHHHHHHHHHHH
T ss_pred             Cch-------------hhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCccCcCC---CcchHHHHHHHHHHH
Confidence            995             378889999999998843788886 3   34422    12222111   225699999999988


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCCcchhHHHHH--------HHHhcCCceEEEEEEeeeeec
Q 028444          153 ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLV--------RLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       153 ~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ++.   .+++++++||++++|......   .....        .....++....|++++|+|++
T Consensus       147 l~~---~g~~~tivrpg~~~g~~~~~~---~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~  204 (346)
T 3i6i_A          147 VEE---SGIPFTYICCNSIASWPYYNN---IHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKF  204 (346)
T ss_dssp             HHH---TTCCBEEEECCEESSCCCSCC--------CCCCSSCEEEETTSCCCEEEECHHHHHHH
T ss_pred             HHH---cCCCEEEEEecccccccCccc---cccccccCCCceEEEccCCCceEEecCHHHHHHH
Confidence            865   689999999999999653211   11000        001235556789999999875

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.91  E-value=5.8e-25  Score=170.82  Aligned_cols=159  Identities=20%  Similarity=0.167  Sum_probs=121.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc--------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF--------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~--------~~d~   68 (209)
                      +++||||+|+||++++++|+++|++|++++|+.++.+....     ..++.++++|++|.+++.++++        ++|+
T Consensus         7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~   86 (260)
T 2qq5_A            7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDV   86 (260)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceE
Confidence            69999999999999999999999999999997654322111     1268899999999998876653        4799


Q ss_pred             EEEcCc--cC-------C----CCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcc
Q 028444           69 IFHTAA--LV-------E----PWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        69 vi~~a~--~~-------~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                      ||||||  ..       .    ...+++++.+++|+.++.++++++.+.+   +.++||++||...+...          
T Consensus        87 lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  156 (260)
T 2qq5_A           87 LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM----------  156 (260)
T ss_dssp             EEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC----------
T ss_pred             EEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC----------
Confidence            999994  21       1    1234466789999999999988776432   34789999998765321          


Q ss_pred             ccccccCChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          133 HEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                           +...|+.+|.+.+.+.+.+    .++|+++++++||++.++.
T Consensus       157 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          157 -----FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             -----SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence                 0145999999777666554    4569999999999999885

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.91  E-value=4.3e-25  Score=173.81  Aligned_cols=160  Identities=18%  Similarity=0.144  Sum_probs=122.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++++.+..      ..++.++.+|++|.+++.++++       ++|
T Consensus        29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999998654332111      1258899999999998877764       789


Q ss_pred             EEEEc-CccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           68 VIFHT-AALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~-a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +|||| |+....     ..+++.+.+++|+.++.++++++.+.+  +.++||++||..++.+.++              .
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  174 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM--------------V  174 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT--------------C
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC--------------c
Confidence            99999 565322     122345689999999999999887642  2369999999876543211              2


Q ss_pred             ChHHHHHHHHHHHHHHHh------hcCCCEEEEecCceecC
Q 028444          140 TQYERSKAVADKIALQAA------SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~------~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|.+.+.+.+.++      ..++++++++||++.++
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~  215 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  215 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence            459999997776665543      34899999999999886

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.91  E-value=4.8e-25  Score=169.81  Aligned_cols=159  Identities=23%  Similarity=0.249  Sum_probs=109.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHH---HHHh---cCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL---VDAC---FGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~~~---~~~d~vi~~a~~   75 (209)
                      +++||||+|+||++++++|++ |++|++++|+.++.+.+....++.++.+|+++.+..   .+.+   .++|+||||||.
T Consensus         7 ~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~   85 (245)
T 3e9n_A            7 IAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAV   85 (245)
T ss_dssp             EEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC--
T ss_pred             EEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence            699999999999999999987 999999999865443332234789999999987542   1122   368999999997


Q ss_pred             CCC------CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      ...      ..+++++.+++|+.++.++++++.+.+  ..+++|++||..++.+..+.              ..|+.+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------~~Y~asK~  151 (245)
T 3e9n_A           86 ARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGN--------------TIYAASKH  151 (245)
T ss_dssp             --------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------C--------------HHHHHHHH
T ss_pred             CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCc--------------hHHHHHHH
Confidence            432      223466789999999999999886542  12689999998877643221              45999999


Q ss_pred             HHHHHHHHH----hhcCCCEEEEecCceecCC
Q 028444          148 VADKIALQA----ASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       148 ~~e~~~~~~----~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+.+.+.+    .++|+++++++||.+.++.
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  183 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPM  183 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence            777666554    4468999999999999873

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.90  E-value=2.4e-25  Score=185.43  Aligned_cols=161  Identities=20%  Similarity=0.236  Sum_probs=123.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CCCCCCCCceEEEEccCCCHHHHHHHhc-------C-cCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACF-------G-CHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~-~d~vi~   71 (209)
                      +++||||+|+||++++++|+++|++|++++|+...  ..+.....++.++++|++|.+++.++++       + +|+|||
T Consensus       215 ~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~  294 (454)
T 3u0b_A          215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVN  294 (454)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEE
T ss_pred             EEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEE
Confidence            69999999999999999999999999999986421  1111111256789999999998877764       3 999999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+..+.              ..|
T Consensus       295 nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~--------------~~Y  360 (454)
T 3u0b_A          295 NAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ--------------TNY  360 (454)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC--------------HHH
T ss_pred             CCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC--------------HHH
Confidence            9997532      224566789999999999999998763   24689999998766443222              459


Q ss_pred             HHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +.+|.    +++.+..++.++|+++++++||++.++..
T Consensus       361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  398 (454)
T 3u0b_A          361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMT  398 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhh
Confidence            99999    55555556666799999999999998743

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.90  E-value=2.9e-23  Score=168.00  Aligned_cols=180  Identities=24%  Similarity=0.278  Sum_probs=131.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC--CCCCCCCceEEEEcc-CCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPSEGALELVYGD-VTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      |+|+|||||||||++++++|+++|++|++++|+..+.  ..+....+++++.+| ++|.+++.++++++|+|||+++...
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~   85 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQA   85 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCCC
Confidence            5799999999999999999999999999999986543  112122378999999 9999999999999999999987421


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccce--eeccCCccccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF--ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~--~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                               .+.|..+ .++++++++.+.+++|||+||..  .|+.               .+...|+.+|..+|++++.
T Consensus        86 ---------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~---------------~~~~~y~~sK~~~E~~~~~  140 (352)
T 1xgk_A           86 ---------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP---------------WPAVPMWAPKFTVENYVRQ  140 (352)
T ss_dssp             ---------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS---------------CCCCTTTHHHHHHHHHHHT
T ss_pred             ---------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC---------------CCCccHHHHHHHHHHHHHH
Confidence                     1347776 99999999873278999999975  2221               0114599999999998875


Q ss_pred             HhhcCCCEEEEecCceecCCCCCcc-hhH------HHHH--HHHhcCCceEEEEEE-eeeeecC
Q 028444          156 AASEGLPIVPVYPGVIYGPGKLTTG-NLV------AKLV--RLLFSQHFSLVFFHC-QITCHAI  209 (209)
Q Consensus       156 ~~~~~~~~~~~rp~~v~g~~~~~~~-~~~------~~~~--~~~~~~~~~~~~~~~-~dva~~i  209 (209)
                         .+++++++||+ +||++..... ..+      ....  .....++....++|+ +|+|+++
T Consensus       141 ---~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai  200 (352)
T 1xgk_A          141 ---LGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPAL  200 (352)
T ss_dssp             ---SSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHH
T ss_pred             ---cCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHH
Confidence               38999999987 6887542110 000      0000  001124556789998 8998753

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.90  E-value=7.7e-24  Score=167.50  Aligned_cols=193  Identities=10%  Similarity=0.066  Sum_probs=123.7

Q ss_pred             EEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcC-----------CCCCCCC---CCC---CceEEEEcc--------CC
Q 028444            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRR-----------TSDISGL---PSE---GALELVYGD--------VT   54 (209)
Q Consensus         2 ~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~-----------~~~~~~~---~~~---~~~~~~~~D--------l~   54 (209)
                      +++||||+  |+||++++++|+++|++|++++|+           ..+++..   ...   .....+.+|        ++
T Consensus        10 ~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~   89 (297)
T 1d7o_A           10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhhh
Confidence            69999999  999999999999999999999854           2222211   110   012344443        22


Q ss_pred             ----C--------HHHHHHHh-------cCcCEEEEcCccCC----C----CCCCccchhhhHHHHHHHHHHHHHhcCC-
Q 028444           55 ----D--------YRSLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (209)
Q Consensus        55 ----~--------~~~~~~~~-------~~~d~vi~~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (209)
                          |        ++++.+++       .++|+||||||...    +    ..+++++.+++|+.++.++++++.+.+. 
T Consensus        90 ~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  169 (297)
T 1d7o_A           90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP  169 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence                1        33444433       36899999998531    1    2234667899999999999999988642 


Q ss_pred             ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHH----Hhh-cCCCEEEEecCceecCCCCCcch
Q 028444          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ----AAS-EGLPIVPVYPGVIYGPGKLTTGN  181 (209)
Q Consensus       107 ~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~----~~~-~~~~~~~~rp~~v~g~~~~~~~~  181 (209)
                      .++||++||...+.+.++.             ...|+.+|++.+.+.+.    +.+ +|+++++++||++++|..... .
T Consensus       170 ~g~iv~isS~~~~~~~~~~-------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-~  235 (297)
T 1d7o_A          170 GGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-G  235 (297)
T ss_dssp             EEEEEEEECGGGTSCCTTC-------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-S
T ss_pred             CceEEEEeccccccCCCCc-------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-c
Confidence            2589999998665332111             02499999966655544    443 699999999999999864321 1


Q ss_pred             hHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          182 LVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ....+........+...+.+++|+|++
T Consensus       236 ~~~~~~~~~~~~~p~~r~~~pedvA~~  262 (297)
T 1d7o_A          236 FIDTMIEYSYNNAPIQKTLTADEVGNA  262 (297)
T ss_dssp             HHHHHHHHHHHHSSSCCCBCHHHHHHH
T ss_pred             ccHHHHHHhhccCCCCCCCCHHHHHHH
Confidence            122222222222222345566776654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.90  E-value=6.2e-25  Score=169.19  Aligned_cols=159  Identities=16%  Similarity=0.147  Sum_probs=113.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEE-E--cCCCCCCCCCCC-CceEEEEccCCCHHHHHH-H---hcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-V--RRTSDISGLPSE-GALELVYGDVTDYRSLVD-A---CFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~--r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~-~---~~~~d~vi~~   72 (209)
                      ++++||||+|+||++++++|+++|++|+++ +  |+.++.+.+... .+....  |..+.+.+.+ +   +.++|+||||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            479999999999999999999999999999 5  875433221110 122222  4444433322 2   2368999999


Q ss_pred             CccCCC---------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           73 AALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        73 a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||....         ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+.+.              ..
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~  145 (244)
T 1zmo_A           80 DYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY--------------NP  145 (244)
T ss_dssp             CCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------CT
T ss_pred             CCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC--------------ch
Confidence            996432         113456789999999999999887532   3478999999877643221              14


Q ss_pred             hHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCC
Q 028444          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~----~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|.+.+.+.+.    +.++|+++++++||++.++.
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  184 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT  184 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence            599999976666554    44568999999999999985

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.90  E-value=5.4e-24  Score=169.12  Aligned_cols=186  Identities=18%  Similarity=0.200  Sum_probs=129.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-----CCC--CCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|+||||||+||++++++|+++|++|++++|+.....     .+.  ...+++++++|++|++++.++++++|+|||++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   84 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   84 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECC
Confidence            47999999999999999999999999999999854210     000  12378999999999999999999999999999


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                      +....         ..|+.++.++++++++.+++++||+ |   +|+......  +....+   ....| .+|..+|+++
T Consensus        85 ~~~~~---------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~--~~~~~p---~~~~y-~sK~~~e~~~  145 (313)
T 1qyd_A           85 AGGVL---------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM--EHALQP---GSITF-IDKRKVRRAI  145 (313)
T ss_dssp             CCSSS---------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC--CCCCSS---TTHHH-HHHHHHHHHH
T ss_pred             ccccc---------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc--ccCCCC---CcchH-HHHHHHHHHH
Confidence            96432         1367778999999998743789985 3   344321111  111111   12358 9999999887


Q ss_pred             HHHhhcCCCEEEEecCceecCCCCCcchh-----H-HHHHHHHhcCCceEEEEEEeeeeec
Q 028444          154 LQAASEGLPIVPVYPGVIYGPGKLTTGNL-----V-AKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       154 ~~~~~~~~~~~~~rp~~v~g~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +.   .+++++++||++++++........     . ...+.....++....+++++|+|++
T Consensus       146 ~~---~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~  203 (313)
T 1qyd_A          146 EA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY  203 (313)
T ss_dssp             HH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHH
T ss_pred             Hh---cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHH
Confidence            53   589999999999987422100000     0 0000011245667889999999875

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.89  E-value=3.7e-23  Score=173.62  Aligned_cols=159  Identities=27%  Similarity=0.354  Sum_probs=125.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCCCCC-------CCC-CCceEEEEccCCCHHHHHHHhcCc-----
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG-------LPS-EGALELVYGDVTDYRSLVDACFGC-----   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----   66 (209)
                      ++++||||+|+||++++++|+++|++ |++++|+......       +.. ..++.++.+|++|.+++..+++++     
T Consensus       227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~  306 (486)
T 2fr1_A          227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP  306 (486)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCC
Confidence            37999999999999999999999985 9999997642111       111 136889999999999999888754     


Q ss_pred             -CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           67 -HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        67 -d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                       |+||||||....      ..+++.+.+++|+.++.++++++.+. +.++||++||...+.+..+.              
T Consensus       307 ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~g~--------------  371 (486)
T 2fr1_A          307 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPGL--------------  371 (486)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTTC--------------
T ss_pred             CcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCCCCC--------------
Confidence             999999997532      22345678899999999999999876 46899999997654332221              


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|.+.+.+.+++.+.|+++++++||.++++
T Consensus       372 ~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~  406 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGS  406 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCC
Confidence            44999999999999888888999999999999876

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.88  E-value=2e-22  Score=169.03  Aligned_cols=159  Identities=22%  Similarity=0.295  Sum_probs=127.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCC-------C-CCCceEEEEccCCCHHHHHHHhc------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL-------P-SEGALELVYGDVTDYRSLVDACF------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~-------~-~~~~~~~~~~Dl~~~~~~~~~~~------~~   66 (209)
                      ++|||||+|+||++++++|+++|+ +|++++|+.......       . ...++.++.+|++|.+++.++++      ++
T Consensus       241 ~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~l  320 (496)
T 3mje_A          241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPL  320 (496)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCE
T ss_pred             EEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            699999999999999999999998 788888864322111       0 11368999999999999988885      47


Q ss_pred             CEEEEcCccC-CC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           67 HVIFHTAALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        67 d~vi~~a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |+||||||.. ..      ..+++.+.+++|+.++.++.+.+.+.+ .++||++||...+.+..+.              
T Consensus       321 d~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~g~--------------  385 (496)
T 3mje_A          321 TAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSGGQ--------------  385 (496)
T ss_dssp             EEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCTTC--------------
T ss_pred             eEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCCCc--------------
Confidence            9999999975 22      122456789999999999999999874 6899999997665433222              


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|...+.+.+++.++|++++++.||.+.+++
T Consensus       386 ~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~g  421 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVG  421 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCc
Confidence            349999999999999888889999999999887654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.88  E-value=7.3e-23  Score=162.16  Aligned_cols=181  Identities=23%  Similarity=0.259  Sum_probs=124.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-C------CCCCCC--CCCceEEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-S------DISGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~------~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      |+|+||||||+||++++++|+++|++|++++|+. .      +...+.  ...+++++++|++|.+++.++++++|+|||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   82 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVIC   82 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEEE
Confidence            5899999999999999999999999999999986 1      110000  013789999999999999999999999999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      +|+...             +.++.++++++++.+.+++||+ |   +|+...    ++.....+  ..+.| .+|..+|.
T Consensus        83 ~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~  138 (307)
T 2gas_A           83 AAGRLL-------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEP--VRQVF-EEKASIRR  138 (307)
T ss_dssp             CSSSSC-------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTT--HHHHH-HHHHHHHH
T ss_pred             CCcccc-------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCc--chhHH-HHHHHHHH
Confidence            998532             3457889999988743788883 3   344221    11111111  12358 99999998


Q ss_pred             HHHHHhhcCCCEEEEecCceecCCCCCcchhH-----HHHHHHHhcCCceEEEEEEeeeeec
Q 028444          152 IALQAASEGLPIVPVYPGVIYGPGKLTTGNLV-----AKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       152 ~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +++.   .+++++++||++++++.........     ...+.....++....+++++|+|++
T Consensus       139 ~~~~---~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          139 VIEA---EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHH---HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             HHHH---cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence            7754   5899999999999986321100000     0000001134566788999999875

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.88  E-value=2.7e-22  Score=169.14  Aligned_cols=158  Identities=22%  Similarity=0.283  Sum_probs=124.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC-------CCC-CCceEEEEccCCCHHHHHHHhcC--cCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG-------LPS-EGALELVYGDVTDYRSLVDACFG--CHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~~~~~~~~--~d~v   69 (209)
                      +++|||||+|+||++++++|+++|+ +|++++|+..+...       +.. ..++.++.+|++|.+++.+++++  +|+|
T Consensus       260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~V  339 (511)
T 2z5l_A          260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAV  339 (511)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEE
Confidence            3799999999999999999999998 58889997532111       111 13588999999999999998875  9999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||||....      ..+++...+++|+.++.++.+++.+..+.++||++||...+.+..+.              ..|+
T Consensus       340 Vh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~--------------~~Ya  405 (511)
T 2z5l_A          340 FHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ--------------GAYA  405 (511)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB--------------HHHH
T ss_pred             EECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC--------------HHHH
Confidence            999997533      12345667899999999999988765245789999997553322211              3599


Q ss_pred             HHHHHHHHHHHHHhhcCCCEEEEecCcee
Q 028444          144 RSKAVADKIALQAASEGLPIVPVYPGVIY  172 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~~~~~~~~~rp~~v~  172 (209)
                      .+|.+.+.+.+.+.+.|+++++++||.+.
T Consensus       406 aaKa~ld~la~~~~~~gi~v~sv~pG~~~  434 (511)
T 2z5l_A          406 AANAALDALAERRRAAGLPATSVAWGLWG  434 (511)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence            99999999999887789999999999883

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.87  E-value=3.3e-23  Score=164.20  Aligned_cols=180  Identities=26%  Similarity=0.326  Sum_probs=124.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC--C-------CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--S-------GLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~--~-------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      |+|+||||||+||++++++|+++|++|++++|+....  .       .+ ...+++++++|++|.+++.++++++|+|||
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            4799999999999999999999999999999975432  0       00 123799999999999999999999999999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      +++...             +.++.++++++++.+++++||+ |   .|+...    ++.....+  ....| .+|..+|.
T Consensus        84 ~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~  139 (308)
T 1qyc_A           84 TVGSLQ-------------IESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVEP--AKSVF-EVKAKVRR  139 (308)
T ss_dssp             CCCGGG-------------SGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTT--HHHHH-HHHHHHHH
T ss_pred             CCcchh-------------hhhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCCc--chhHH-HHHHHHHH
Confidence            998531             3457889999998743788884 3   344221    11111110  01358 99999998


Q ss_pred             HHHHHhhcCCCEEEEecCceecCCCCCcchhH---H--HHHHHHhcCCceEEEEEEeeeeec
Q 028444          152 IALQAASEGLPIVPVYPGVIYGPGKLTTGNLV---A--KLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       152 ~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +++.   .+++++++||++++++.........   .  ..+.....++....+++++|+|++
T Consensus       140 ~~~~---~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (308)
T 1qyc_A          140 AIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTF  198 (308)
T ss_dssp             HHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHH
T ss_pred             HHHh---cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHH
Confidence            8764   5899999999999885321100000   0  000001235567789999999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.87  E-value=1.2e-22  Score=161.87  Aligned_cols=173  Identities=18%  Similarity=0.242  Sum_probs=123.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCCCC--CCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      +|+||||||+||++++++|+++|++|++++|+.. +...+.  ...+++++++|++|.+++.++++++|+|||+++... 
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~-   91 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ-   91 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG-
T ss_pred             eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh-
Confidence            7999999999999999999999999999999864 211000  113789999999999999999999999999998531 


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                                  +.++.++++++++.+++++||+ |   .|+...    ++.....+  ....| .+|..+|.+++.   
T Consensus        92 ------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~~~~~---  145 (318)
T 2r6j_A           92 ------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPP--FEALI-ERKRMIRRAIEE---  145 (318)
T ss_dssp             ------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHH--HHHHH-HHHHHHHHHHHH---
T ss_pred             ------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCC--cchhH-HHHHHHHHHHHh---
Confidence                        3457889999998743788885 3   344221    11111111  11348 999999988764   


Q ss_pred             cCCCEEEEecCceecCCCCCcchhHHHHHHH---------HhcCCceEEEEEEeeeeec
Q 028444          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRL---------LFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       159 ~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~  208 (209)
                      .+++++++||+++++.       ++..++..         ...++....+++++|+|++
T Consensus       146 ~~~~~~~lr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (318)
T 2r6j_A          146 ANIPYTYVSANCFASY-------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLY  197 (318)
T ss_dssp             TTCCBEEEECCEEHHH-------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHH
T ss_pred             cCCCeEEEEcceehhh-------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHH
Confidence            5899999999988763       12222211         1124456778999998875

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.87  E-value=1e-22  Score=162.62  Aligned_cols=161  Identities=14%  Similarity=0.077  Sum_probs=97.9

Q ss_pred             EEEEEcC--CChhHHHHHHHHHhCCCeEEEEEcCC-----------CCCCCC-----------CC----CC----ceEEE
Q 028444            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT-----------SDISGL-----------PS----EG----ALELV   49 (209)
Q Consensus         2 ~ilItG~--~G~IG~~l~~~l~~~g~~V~~~~r~~-----------~~~~~~-----------~~----~~----~~~~~   49 (209)
                      +++||||  +|+||++++++|+++|++|++++|++           .+++..           ..    ..    ...++
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (319)
T 2ptg_A           11 TAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIY   90 (319)
T ss_dssp             EEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEE
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccc
Confidence            5999999  89999999999999999999998642           111110           00    00    02445


Q ss_pred             EccC------------CC--------HHHHHHHh-------cCcCEEEEcCccCC----C----CCCCccchhhhHHHHH
Q 028444           50 YGDV------------TD--------YRSLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGL   94 (209)
Q Consensus        50 ~~Dl------------~~--------~~~~~~~~-------~~~d~vi~~a~~~~----~----~~~~~~~~~~~n~~~~   94 (209)
                      .+|+            +|        .+++.+++       .++|+||||||...    +    ..+++++.+++|+.++
T Consensus        91 ~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~  170 (319)
T 2ptg_A           91 PLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSF  170 (319)
T ss_dssp             ECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHH
T ss_pred             cccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHH
Confidence            4442            22        22444433       36899999999531    1    2234667899999999


Q ss_pred             HHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHH----HHHHHHHhh-cCCCEEEEec
Q 028444           95 KNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA----DKIALQAAS-EGLPIVPVYP  168 (209)
Q Consensus        95 ~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~-~~~~~~~~rp  168 (209)
                      .++++++.+.+. .++||++||...+.+.+..             ...|+.+|++.    +.+..++.+ +|+++++++|
T Consensus       171 ~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          171 VSLLQHFLPLMKEGGSALALSYIASEKVIPGY-------------GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHHHHGGGEEEEEEEEEEEECC-------------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHhcCceEEEEeccccccccCcc-------------chhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            999999988742 2689999998765432111             02499999844    455555554 7999999999


Q ss_pred             CceecCC
Q 028444          169 GVIYGPG  175 (209)
Q Consensus       169 ~~v~g~~  175 (209)
                      |++.++.
T Consensus       238 G~v~T~~  244 (319)
T 2ptg_A          238 GPLKSRA  244 (319)
T ss_dssp             CCCC---
T ss_pred             CCccChh
Confidence            9999874

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.87  E-value=6.9e-22  Score=157.82  Aligned_cols=156  Identities=18%  Similarity=0.107  Sum_probs=112.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC---------CCCCCCCC---CceEEEEccCCCHHHHHHHh-----
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---------DISGLPSE---GALELVYGDVTDYRSLVDAC-----   63 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~---------~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~-----   63 (209)
                      ++++||||+|+||++++++|+++|++|++.+|+..         +.+.....   .+. ...+|+++.+++.+++     
T Consensus        10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~~~~   88 (319)
T 1gz6_A           10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKTALD   88 (319)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHHHHH
Confidence            36999999999999999999999999999866421         11100000   011 2357999988765554     


Q ss_pred             --cCcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcc
Q 028444           64 --FGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (209)
Q Consensus        64 --~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~  132 (209)
                        .++|+||||||....      ..++++..+++|+.++.++++++.+.+   +.++||++||...+.+..+        
T Consensus        89 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~--------  160 (319)
T 1gz6_A           89 TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG--------  160 (319)
T ss_dssp             HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC--------
Confidence              368999999997532      223566789999999999999986532   3479999999754322111        


Q ss_pred             ccccccCChHHHHHHHHHHHHHHHh----hcCCCEEEEecCce
Q 028444          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVI  171 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~e~~~~~~~----~~~~~~~~~rp~~v  171 (209)
                            ...|+.+|.+.+.+.+.++    ++|+++++++||.+
T Consensus       161 ------~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          161 ------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence                  2459999997776665553    45899999999997

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.86  E-value=5.3e-22  Score=158.26  Aligned_cols=174  Identities=15%  Similarity=0.200  Sum_probs=123.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCC-----CCCC--CCCceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDI-----SGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~-----~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |+|+||||||+||++++++|+++|++|++++|+. ...     ..+.  ...+++++++|++|.+++.++++++|+|||+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~   84 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISA   84 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            5799999999999999999999999999999986 211     0000  0137899999999999999999999999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHH
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  152 (209)
                      |+...             +.++.++++++++.+.+++||+ |   +|+...    ++.....+  ..+.| .+|..+|.+
T Consensus        85 a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~~  140 (321)
T 3c1o_A           85 LPFPM-------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPP--FESVL-EKKRIIRRA  140 (321)
T ss_dssp             CCGGG-------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHH--HHHHH-HHHHHHHHH
T ss_pred             CCccc-------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCC--cchHH-HHHHHHHHH
Confidence            98531             4457889999998732788883 3   344221    11111100  02459 999999988


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHH------------HHhcCCceEEEEEEeeeeec
Q 028444          153 ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVR------------LLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       153 ~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~dva~~  208 (209)
                      ++.   .+++++++||++++++.       ...+..            ....++....+++++|+|++
T Consensus       141 ~~~---~~~~~~~lrp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (321)
T 3c1o_A          141 IEA---AALPYTYVSANCFGAYF-------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKY  198 (321)
T ss_dssp             HHH---HTCCBEEEECCEEHHHH-------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHH
T ss_pred             HHH---cCCCeEEEEeceecccc-------ccccccccccccccCceEEecCCCcceeEeeHHHHHHH
Confidence            764   58999999999988752       111111            01134556788999999875

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.86  E-value=2.5e-22  Score=160.10  Aligned_cols=160  Identities=15%  Similarity=0.098  Sum_probs=110.3

Q ss_pred             EEEEEcC--CChhHHHHHHHHHhCCCeEEEEEcCC-----------CCCC---CCCCCC---ceEEEEccC---------
Q 028444            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT-----------SDIS---GLPSEG---ALELVYGDV---------   53 (209)
Q Consensus         2 ~ilItG~--~G~IG~~l~~~l~~~g~~V~~~~r~~-----------~~~~---~~~~~~---~~~~~~~Dl---------   53 (209)
                      +++||||  +|+||++++++|+++|++|++++|++           .+++   ++....   .+.++.+|+         
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   90 (315)
T 2o2s_A           11 TAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVP   90 (315)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSSC
T ss_pred             EEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchhh
Confidence            5999999  89999999999999999999998642           1111   111100   124444443         


Q ss_pred             ---CC--------HHHHHHHh-------cCcCEEEEcCccCC----C----CCCCccchhhhHHHHHHHHHHHHHhcCC-
Q 028444           54 ---TD--------YRSLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (209)
Q Consensus        54 ---~~--------~~~~~~~~-------~~~d~vi~~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (209)
                         +|        .+++..++       .++|+||||||...    +    ..+++++.+++|+.++.++++++.+.+. 
T Consensus        91 ~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  170 (315)
T 2o2s_A           91 QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE  170 (315)
T ss_dssp             HHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE
T ss_pred             hhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence               32        33444433       36899999999532    1    2234667899999999999999987642 


Q ss_pred             ccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH----HHHhh-cCCCEEEEecCceecC
Q 028444          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA----LQAAS-EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       107 ~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~----~~~~~-~~~~~~~~rp~~v~g~  174 (209)
                      .++||++||...+.+..+.             ...|+.+|+..+.+.    .++.+ +|+++++++||++.++
T Consensus       171 ~g~Iv~isS~~~~~~~~~~-------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~  230 (315)
T 2o2s_A          171 GGSAVTLSYLAAERVVPGY-------------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR  230 (315)
T ss_dssp             EEEEEEEEEGGGTSCCTTC-------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred             CCEEEEEecccccccCCCc-------------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence            2589999998665332111             024999999555554    45553 7999999999999886

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.86  E-value=1.2e-21  Score=165.77  Aligned_cols=159  Identities=19%  Similarity=0.207  Sum_probs=123.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEE-EcCCCC----------CCCCC---C-----CCceEEEEccCCCHHHHHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRAL-VRRTSD----------ISGLP---S-----EGALELVYGDVTDYRSLVD   61 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~-~r~~~~----------~~~~~---~-----~~~~~~~~~Dl~~~~~~~~   61 (209)
                      ++|||||+|+||++++++|+++|++ |+++ +|+..+          .....   .     ..++.++.+|++|.+++.+
T Consensus       253 ~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~  332 (525)
T 3qp9_A          253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAAR  332 (525)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHH
Confidence            6899999999999999999999987 6666 777422          11110   0     1368899999999999998


Q ss_pred             HhcC------cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC----ccEEEEEccceeeccCCcc
Q 028444           62 ACFG------CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGY  125 (209)
Q Consensus        62 ~~~~------~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~ss~~~~~~~~~~  125 (209)
                      +++.      +|+||||||....      ..+++.+++++|+.++.++.+++.+.+.    ..+||++||...+.+..+.
T Consensus       333 ~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~  412 (525)
T 3qp9_A          333 LLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQ  412 (525)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTC
T ss_pred             HHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCC
Confidence            8864      6999999997532      2234567899999999999999988752    4689999998765443222


Q ss_pred             ccCCCccccccccCChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          126 IADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                                    ..|+.+|.+.+.+.+++.++|++++++.||.+.++
T Consensus       413 --------------~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tg  447 (525)
T 3qp9_A          413 --------------GAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGS  447 (525)
T ss_dssp             --------------HHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTS
T ss_pred             --------------HHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccc
Confidence                          34999999999998877778999999999999554

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.86  E-value=3.8e-22  Score=159.98  Aligned_cols=161  Identities=12%  Similarity=0.032  Sum_probs=117.7

Q ss_pred             CEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCC---------CCCCCC----C----CCCceEEEEccCCCH--H--
Q 028444            1 MKILVSGASG--YLGGRLCHALLKQGHSVRALVRRT---------SDISGL----P----SEGALELVYGDVTDY--R--   57 (209)
Q Consensus         1 m~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~---------~~~~~~----~----~~~~~~~~~~Dl~~~--~--   57 (209)
                      ++++||||++  +||++++++|+++|++|++.+|++         ++.+..    .    ....+.++.+|+++.  +  
T Consensus         3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   82 (329)
T 3lt0_A            3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence            3699999875  999999999999999999776543         111110    0    112478889999887  6  


Q ss_pred             ----------------HHHHHhc-------CcCEEEEcCccCC----C----CCCCccchhhhHHHHHHHHHHHHHhcCC
Q 028444           58 ----------------SLVDACF-------GCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT  106 (209)
Q Consensus        58 ----------------~~~~~~~-------~~d~vi~~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~  106 (209)
                                      ++.++++       ++|+||||||...    +    ..+++++++++|+.++..+++++.+.+.
T Consensus        83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~  162 (329)
T 3lt0_A           83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            6655543       5899999999631    1    2234677899999999999999988753


Q ss_pred             c-cEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHH----HHHHHHHhh-cCCCEEEEecCceecC
Q 028444          107 V-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA----DKIALQAAS-EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       107 ~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~----e~~~~~~~~-~~~~~~~~rp~~v~g~  174 (209)
                      . .+||++||...+.+.+...             ..|+.||++.    +.+..++.+ +|++++++.||++.++
T Consensus       163 ~~g~Iv~isS~~~~~~~~~~~-------------~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          163 PQSSIISLTYHASQKVVPGYG-------------GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEECGGGTSCCTTCT-------------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             hCCeEEEEeCccccCCCCcch-------------HHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            2 5899999987654322110             1499999944    455556666 7999999999999886

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.84  E-value=1.3e-20  Score=153.65  Aligned_cols=163  Identities=12%  Similarity=-0.017  Sum_probs=117.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHh-CCCeEEEEEcCCCCCCCC----------------C-CCCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL----------------P-SEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~r~~~~~~~~----------------~-~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      ++|||||+++||++++++|++ +|++|++++|+.+.....                . ....+..+.+|++|++++.+++
T Consensus        63 vaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v  142 (422)
T 3s8m_A           63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVI  142 (422)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            689999999999999999999 999999999987654321                0 1135788999999998876654


Q ss_pred             --------cCcCEEEEcCccC---------------CC-------------------------CCCCccchhhhHHHHHH
Q 028444           64 --------FGCHVIFHTAALV---------------EP-------------------------WLPDPSRFFAVNVEGLK   95 (209)
Q Consensus        64 --------~~~d~vi~~a~~~---------------~~-------------------------~~~~~~~~~~~n~~~~~   95 (209)
                              .++|+||||||..               .+                         ..+++++.+++|..+++
T Consensus       143 ~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~  222 (422)
T 3s8m_A          143 ELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDW  222 (422)
T ss_dssp             HHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHH
Confidence                    3589999999862               11                         11234456777777765


Q ss_pred             -HHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEe
Q 028444           96 -NVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVY  167 (209)
Q Consensus        96 -~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~r  167 (209)
                       .+++++....   +..++|++||.......+.+            ....|++||+    +++.+..+++++|++++++.
T Consensus       223 ~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~------------~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVa  290 (422)
T 3s8m_A          223 ELWIDALEGAGVLADGARSVAFSYIGTEITWPIY------------WHGALGKAKVDLDRTAQRLNARLAKHGGGANVAV  290 (422)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHH------------TSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCc------------cchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEE
Confidence             6677665431   12579999997654322111            0134999999    55556666777899999999


Q ss_pred             cCceecCCC
Q 028444          168 PGVIYGPGK  176 (209)
Q Consensus       168 p~~v~g~~~  176 (209)
                      ||.+.+|..
T Consensus       291 PG~i~T~~~  299 (422)
T 3s8m_A          291 LKSVVTQAS  299 (422)
T ss_dssp             ECCCCCTTG
T ss_pred             cCCCcChhh
Confidence            999999854

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.84  E-value=2.5e-20  Score=150.81  Aligned_cols=161  Identities=13%  Similarity=-0.052  Sum_probs=118.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHh-CCCeEEEEEcCCCCCCCC------------C-----CCCceEEEEccCCCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL------------P-----SEGALELVYGDVTDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~r~~~~~~~~------------~-----~~~~~~~~~~Dl~~~~~~~~~~   63 (209)
                      ++|||||+++||++++++|++ +|++|++++|+.+.....            .     ....+..+.+|++|++++.+++
T Consensus        49 vaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v  128 (405)
T 3zu3_A           49 RVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTI  128 (405)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            689999999999999999999 999999999876543211            0     1135788999999999887766


Q ss_pred             c-------CcCEEEEcCccC---------------CC-------------------------CCCCccchhhhHHHHHH-
Q 028444           64 F-------GCHVIFHTAALV---------------EP-------------------------WLPDPSRFFAVNVEGLK-   95 (209)
Q Consensus        64 ~-------~~d~vi~~a~~~---------------~~-------------------------~~~~~~~~~~~n~~~~~-   95 (209)
                      +       ++|++|||||..               .+                         ..+++++.+++|+.+++ 
T Consensus       129 ~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~  208 (405)
T 3zu3_A          129 DAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQ  208 (405)
T ss_dssp             HHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHH
T ss_pred             HHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHH
Confidence            4       589999999863               11                         11245677888888887 


Q ss_pred             HHHHHHHhc-C--CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH----HHHHHHHHHhhc-CCCEEEEe
Q 028444           96 NVVQAAKET-K--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASE-GLPIVPVY  167 (209)
Q Consensus        96 ~l~~~~~~~-~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~-~~~~~~~r  167 (209)
                      .+++++... +  ...++|++||.......+.+            ....|+++|.    +++.+..+++++ |++++.+.
T Consensus       209 ~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~------------~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVa  276 (405)
T 3zu3_A          209 MWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY------------WNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSV  276 (405)
T ss_dssp             HHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT------------TTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             HHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc------------cchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEE
Confidence            666665432 2  12579999997654322211            0145999999    555566667778 99999999


Q ss_pred             cCceecC
Q 028444          168 PGVIYGP  174 (209)
Q Consensus       168 p~~v~g~  174 (209)
                      ||.+.++
T Consensus       277 PG~i~T~  283 (405)
T 3zu3_A          277 LKAVVSQ  283 (405)
T ss_dssp             CCCCCCH
T ss_pred             eCCCcCc
Confidence            9999987

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.82  E-value=3.9e-21  Score=165.54  Aligned_cols=156  Identities=17%  Similarity=0.096  Sum_probs=107.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC---------CCCCCCCCCC---CceEEEEccCCCHHHHHHHhc-----
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR---------TSDISGLPSE---GALELVYGDVTDYRSLVDACF-----   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~---------~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~-----   64 (209)
                      +++||||+|+||++++++|+++|++|++++|+         ....+.....   .+. ...+|++|.+++.++++     
T Consensus        21 ~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~~~~~~~   99 (613)
T 3oml_A           21 VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVIETAIKA   99 (613)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHHC-----
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999883         2221111000   111 23479999888877765     


Q ss_pred             --CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccc
Q 028444           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (209)
Q Consensus        65 --~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~  133 (209)
                        ++|+||||||....      ..+++++.+++|+.++.++++++.+.+   +.++||++||...+.+..+.        
T Consensus       100 ~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~--------  171 (613)
T 3oml_A          100 FGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ--------  171 (613)
T ss_dssp             -----CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTC--------
T ss_pred             CCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCC--------
Confidence              58999999997532      224567889999999999999986542   34689999997665432221        


Q ss_pred             cccccCChHHHHHHHHHHHH----HHHhhcCCCEEEEecCcee
Q 028444          134 EEKYFCTQYERSKAVADKIA----LQAASEGLPIVPVYPGVIY  172 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~~~e~~~----~~~~~~~~~~~~~rp~~v~  172 (209)
                            ..|+.+|++.+.+.    .++.++|++++++.||.+.
T Consensus       172 ------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t  208 (613)
T 3oml_A          172 ------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS  208 (613)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC
Confidence                  45999999655554    4455669999999999753

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.82  E-value=1.4e-21  Score=156.58  Aligned_cols=168  Identities=14%  Similarity=0.074  Sum_probs=120.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCC--CCC----CCCCCCceEEEEccCCCHHHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTS--DIS----GLPSEGALELVYGDVTDYRSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   67 (209)
                      |||+||||+||||++++.+|+++|+       +|+++++.+.  +..    .+.. ..+.++ +|+++.+.+.++++++|
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-CAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-cccccc-CCeEeccChHHHhCCCC
Confidence            5899999999999999999999986       8999987531  100    0100 011223 57776666778889999


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEcccee-eccCCccccCCCccccccccCChHHHH
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~-~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      +|||+||.......++.+.++.|+.++.++++++++.. ...+++++|+... ..+    ...+..+  ..++.+.|+.+
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~----~~~~~~~--~~~p~~~yg~t  156 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL----IAYKNAP--GLNPRNFTAMT  156 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCT--TSCGGGEEECC
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH----HHHHHcC--CCChhheeccc
Confidence            99999997654445677899999999999999999873 3347887776421 110    1111110  01122459999


Q ss_pred             HHHHHHHHHHHhh-cCCCEEEEecCceecCCC
Q 028444          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       146 K~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~  176 (209)
                      |..+|.+...+++ .|+++..+||+++|||+.
T Consensus       157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             hHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            9999999888764 599999999999999964

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.81  E-value=2.6e-20  Score=164.35  Aligned_cols=157  Identities=22%  Similarity=0.340  Sum_probs=126.7

Q ss_pred             EEEEEcCCChhHHHHHHHHH-hCCC-eEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhc------C
Q 028444            2 KILVSGASGYLGGRLCHALL-KQGH-SVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF------G   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~-~~g~-~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~------~   65 (209)
                      +++||||+|+||+++++.|+ ++|+ +|++++|+..+.+...        ...++.++++|++|.+++.++++      .
T Consensus       532 ~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~  611 (795)
T 3slk_A          532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHP  611 (795)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             ceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Confidence            68999999999999999999 7998 5889999843222110        11368899999999999988875      3


Q ss_pred             cCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +|+||||||....      ..+++++.+++|+.+++++.+++.+.+   +||++||...+.+..+.              
T Consensus       612 id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l---~iV~~SS~ag~~g~~g~--------------  674 (795)
T 3slk_A          612 LTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV---ALVLFSSVSGVLGSGGQ--------------  674 (795)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS---EEEEEEETHHHHTCSSC--------------
T ss_pred             CEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC---EEEEEccHHhcCCCCCC--------------
Confidence            6999999997532      234577889999999999999986554   89999998766443332              


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+++|.+.+.+.+++.++|++++++.||.+.+++
T Consensus       675 ~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          675 GNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcch
Confidence            349999999999999999899999999999988763

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.80  E-value=2.8e-20  Score=159.76  Aligned_cols=158  Identities=18%  Similarity=0.186  Sum_probs=114.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-C-CCCCC-CCceEEEEccC-CCHHHHHH----HhcCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-I-SGLPS-EGALELVYGDV-TDYRSLVD----ACFGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~-~~~~~-~~~~~~~~~Dl-~~~~~~~~----~~~~~d~vi~~a   73 (209)
                      .++||||+++||++++++|+++|++|++.+|.... . +++.. ..++..+.+|+ ++.+.+.+    .+.++|++||||
T Consensus       324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVnNA  403 (604)
T 2et6_A          324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNA  403 (604)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             eEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            58999999999999999999999999998763211 0 01111 12466778888 65544322    234799999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |....      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+..+.              ..|+.
T Consensus       404 Gi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~--------------~~Y~a  469 (604)
T 2et6_A          404 GILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ--------------ANYSS  469 (604)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTB--------------HHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC--------------hhHHH
Confidence            97422      224577889999999999999987653   23689999997654322211              34999


Q ss_pred             HHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      ||+    +++.+..+++++|++++++.||. .++
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~  502 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA  502 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc
Confidence            999    55666666777899999999995 544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.80  E-value=3.4e-20  Score=159.28  Aligned_cols=154  Identities=21%  Similarity=0.159  Sum_probs=108.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC---------CCCCCCCCC---CceEEEEccCCCHHHHHHH-------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---------SDISGLPSE---GALELVYGDVTDYRSLVDA-------   62 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~---------~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~-------   62 (209)
                      .++||||+++||++++++|+++|++|++.+|+.         ++++.+.++   .+... .+|++|.+++.++       
T Consensus        10 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~~~~~   88 (604)
T 2et6_A           10 VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVETAVKN   88 (604)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999988754         111111000   11122 2466665433322       


Q ss_pred             hcCcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccc
Q 028444           63 CFGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (209)
Q Consensus        63 ~~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~  133 (209)
                      +.++|++|||||+...      ..+++++.+++|+.++.++++++.+.+   +..+||++||...+.+..+.        
T Consensus        89 ~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~--------  160 (604)
T 2et6_A           89 FGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ--------  160 (604)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB--------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCc--------
Confidence            3469999999997422      234577899999999999999987654   23689999997664332221        


Q ss_pred             cccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCc
Q 028444          134 EEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGV  170 (209)
Q Consensus       134 ~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~  170 (209)
                            ..|++||+    +++.+..+++++|++++++.|+.
T Consensus       161 ------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~  195 (604)
T 2et6_A          161 ------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA  195 (604)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC
Confidence                  34999999    55666666777899999999973

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.79  E-value=1.2e-18  Score=142.83  Aligned_cols=161  Identities=11%  Similarity=-0.081  Sum_probs=114.8

Q ss_pred             EEEEEcCCChhHHH--HHHHHHhCCCeEEEEEcCCCCCCCC------------C-----CCCceEEEEccCCCHHHHHHH
Q 028444            2 KILVSGASGYLGGR--LCHALLKQGHSVRALVRRTSDISGL------------P-----SEGALELVYGDVTDYRSLVDA   62 (209)
Q Consensus         2 ~ilItG~~G~IG~~--l~~~l~~~g~~V~~~~r~~~~~~~~------------~-----~~~~~~~~~~Dl~~~~~~~~~   62 (209)
                      ++|||||+++||++  ++++|.++|++|++++|+.......            .     ....+..+++|++|.+++.++
T Consensus        62 ~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~  141 (418)
T 4eue_A           62 KVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKV  141 (418)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHH
Confidence            69999999999999  9999999999999999976543211            0     013578999999999988776


Q ss_pred             hc-------CcCEEEEcCccC---------------CC-------------------------CCCCccchhhhHHHHHH
Q 028444           63 CF-------GCHVIFHTAALV---------------EP-------------------------WLPDPSRFFAVNVEGLK   95 (209)
Q Consensus        63 ~~-------~~d~vi~~a~~~---------------~~-------------------------~~~~~~~~~~~n~~~~~   95 (209)
                      ++       ++|++|||||..               .+                         ..+++++.+++|..+.+
T Consensus       142 v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~  221 (418)
T 4eue_A          142 IKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDW  221 (418)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHH
Confidence            63       589999999863               01                         11223455667766666


Q ss_pred             -HHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH----HHHHHHHHHhh-cCCCEEEE
Q 028444           96 -NVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPV  166 (209)
Q Consensus        96 -~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~~~~~~~~  166 (209)
                       .+++++....   ...++|++||.......+.+            ....|+++|+    +++.+..++++ +|++++++
T Consensus       222 ~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~------------~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V  289 (418)
T 4eue_A          222 QEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY------------REGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVS  289 (418)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred             HHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc------------ccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEE
Confidence             6666665432   12479999987543322111            1145999999    45566667777 89999999


Q ss_pred             ecCceecC
Q 028444          167 YPGVIYGP  174 (209)
Q Consensus       167 rp~~v~g~  174 (209)
                      .||.+.++
T Consensus       290 ~PG~v~T~  297 (418)
T 4eue_A          290 VNKALVTK  297 (418)
T ss_dssp             ECCCCCCH
T ss_pred             ECCcCcCh
Confidence            99999986

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.74  E-value=3.7e-19  Score=161.22  Aligned_cols=156  Identities=17%  Similarity=0.158  Sum_probs=115.8

Q ss_pred             EEEEEcCCCh-hHHHHHHHHHhCCCeEEEEE-cCCCCCCC----CCC-----CCceEEEEccCCCHHHHHHHhc------
Q 028444            2 KILVSGASGY-LGGRLCHALLKQGHSVRALV-RRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACF------   64 (209)
Q Consensus         2 ~ilItG~~G~-IG~~l~~~l~~~g~~V~~~~-r~~~~~~~----~~~-----~~~~~~~~~Dl~~~~~~~~~~~------   64 (209)
                      ++|||||+|+ ||++++++|+++|++|++++ |+.++...    +..     ..++.++.+|++|.+++..+++      
T Consensus       478 vALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~  557 (1688)
T 2pff_A          478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  557 (1688)
T ss_dssp             CEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCT
T ss_pred             EEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence            5999999998 99999999999999999984 55544332    111     1357899999999988877652      


Q ss_pred             -------CcCEEEEcCccCCCC---------CCCccchhhhHHHHHHHHHHHH--HhcCC---ccEEEEEccceeeccCC
Q 028444           65 -------GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAA--KETKT---VEKIIYTSSFFALGSTD  123 (209)
Q Consensus        65 -------~~d~vi~~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~--~~~~~---~~~~i~~ss~~~~~~~~  123 (209)
                             ++|+||||||.....         .+++.+.+++|+.++.++++++  .+.+.   ..+||++||...+.+  
T Consensus       558 ~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--  635 (1688)
T 2pff_A          558 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  635 (1688)
T ss_dssp             TSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--
Confidence                   489999999974322         1235678999999999999988  33332   257999999754422  


Q ss_pred             ccccCCCccccccccCChHHHHHHHHHHH-HHHHhh---cCCCEEEEecCceec
Q 028444          124 GYIADENQVHEEKYFCTQYERSKAVADKI-ALQAAS---EGLPIVPVYPGVIYG  173 (209)
Q Consensus       124 ~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~---~~~~~~~~rp~~v~g  173 (209)
                      +              ...|++||++.+.+ .+.+++   ..++++.+.||++.|
T Consensus       636 g--------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          636 G--------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             C--------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             C--------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence            1              14599999998888 333332   138999999999984

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.74  E-value=1.9e-18  Score=160.63  Aligned_cols=156  Identities=18%  Similarity=0.166  Sum_probs=116.0

Q ss_pred             EEEEEcCCCh-hHHHHHHHHHhCCCeEEEEE-cCCCCCCC----C----C-CCCceEEEEccCCCHHHHHHHhc------
Q 028444            2 KILVSGASGY-LGGRLCHALLKQGHSVRALV-RRTSDISG----L----P-SEGALELVYGDVTDYRSLVDACF------   64 (209)
Q Consensus         2 ~ilItG~~G~-IG~~l~~~l~~~g~~V~~~~-r~~~~~~~----~----~-~~~~~~~~~~Dl~~~~~~~~~~~------   64 (209)
                      ++|||||+++ ||++++++|+++|++|++++ |+.++...    +    . ...++.++.+|++|.+++..+++      
T Consensus       677 vaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~  756 (1887)
T 2uv8_A          677 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  756 (1887)
T ss_dssp             EEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCT
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            6999999998 99999999999999999985 55433211    1    1 11368899999999999877652      


Q ss_pred             -------CcCEEEEcCccCCCC---------CCCccchhhhHHHHHHHHHHHHH--hcCC---ccEEEEEccceeeccCC
Q 028444           65 -------GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAAK--ETKT---VEKIIYTSSFFALGSTD  123 (209)
Q Consensus        65 -------~~d~vi~~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~--~~~~---~~~~i~~ss~~~~~~~~  123 (209)
                             ++|+||||||.....         .+++.+++++|+.++..+++.++  +.+.   ..+||++||...+.+  
T Consensus       757 ~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--  834 (1887)
T 2uv8_A          757 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  834 (1887)
T ss_dssp             TTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--
Confidence                   589999999975322         23356789999999999999883  3321   258999999765432  


Q ss_pred             ccccCCCccccccccCChHHHHHHHHHHH-HHHHhhc---CCCEEEEecCceec
Q 028444          124 GYIADENQVHEEKYFCTQYERSKAVADKI-ALQAASE---GLPIVPVYPGVIYG  173 (209)
Q Consensus       124 ~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~---~~~~~~~rp~~v~g  173 (209)
                      +              ...|+.+|+..+.+ .+.+++.   .+++++++||++.|
T Consensus       835 g--------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t  874 (1887)
T 2uv8_A          835 G--------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  874 (1887)
T ss_dssp             C--------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred             C--------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence            1              13599999988777 4444321   29999999999993

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.72  E-value=9e-18  Score=155.86  Aligned_cols=158  Identities=16%  Similarity=0.085  Sum_probs=115.7

Q ss_pred             EEEEEcCCCh-hHHHHHHHHHhCCCeEEEEE-cCCCCCC--------CCCC-CCceEEEEccCCCHHHHHHHhc------
Q 028444            2 KILVSGASGY-LGGRLCHALLKQGHSVRALV-RRTSDIS--------GLPS-EGALELVYGDVTDYRSLVDACF------   64 (209)
Q Consensus         2 ~ilItG~~G~-IG~~l~~~l~~~g~~V~~~~-r~~~~~~--------~~~~-~~~~~~~~~Dl~~~~~~~~~~~------   64 (209)
                      ++|||||+|+ ||++++++|+++|++|++++ |+.++..        ++.. ..++.++.+|++|.+++..+++      
T Consensus       654 vaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~  733 (1878)
T 2uv9_A          654 HALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTK  733 (1878)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSS
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence            6999999999 99999999999999999986 4433221        1111 1358899999999999877662      


Q ss_pred             -----CcCEEEEcCccCCCC---------CCCccchhhhHHHHHHHHHHHH--HhcC---CccEEEEEccceeeccCCcc
Q 028444           65 -----GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAA--KETK---TVEKIIYTSSFFALGSTDGY  125 (209)
Q Consensus        65 -----~~d~vi~~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~--~~~~---~~~~~i~~ss~~~~~~~~~~  125 (209)
                           ++|+||||||.....         .+++.+++++|+.++.++++.+  .+.+   +..+||++||...+.+  . 
T Consensus       734 ~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--g-  810 (1878)
T 2uv9_A          734 NGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--N-  810 (1878)
T ss_dssp             SSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--C-
T ss_pred             cccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--C-
Confidence                 589999999975321         1235678999999999998873  3332   1258999999765432  1 


Q ss_pred             ccCCCccccccccCChHHHHHHHHHHHHHHHh-h---cCCCEEEEecCcee-cCC
Q 028444          126 IADENQVHEEKYFCTQYERSKAVADKIALQAA-S---EGLPIVPVYPGVIY-GPG  175 (209)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~-~---~~~~~~~~rp~~v~-g~~  175 (209)
                                   ...|+.+|+..+.+.+.+. +   .+++++.+.||++. ++.
T Consensus       811 -------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m  852 (1878)
T 2uv9_A          811 -------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL  852 (1878)
T ss_dssp             -------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc
Confidence                         1349999998887755432 1   13999999999998 653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.64  E-value=6.7e-16  Score=149.24  Aligned_cols=158  Identities=15%  Similarity=0.124  Sum_probs=117.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCCCCC-------CC-CCCceEEEEccCCCHHHHHHHhc------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG-------LP-SEGALELVYGDVTDYRSLVDACF------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~~~~-------~~-~~~~~~~~~~Dl~~~~~~~~~~~------~~   66 (209)
                      +++||||+|+||+++++.|+++|++ |++++|+..+.+.       +. ...++.++.+|++|.+++.++++      .+
T Consensus      1886 ~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~i 1965 (2512)
T 2vz8_A         1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPV 1965 (2512)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCE
T ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999997 7778887654321       10 11357888999999999877664      58


Q ss_pred             CEEEEcCccC------CCCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           67 HVIFHTAALV------EPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        67 d~vi~~a~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |+||||||..      +...+++++.+++|+.|++++.+++.+.+ ...+||++||.....+..+.              
T Consensus      1966 d~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~-------------- 2031 (2512)
T 2vz8_A         1966 GGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ-------------- 2031 (2512)
T ss_dssp             EEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC--------------
T ss_pred             cEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc--------------
Confidence            9999999963      22456788899999999999999887653 23689999997665433222              


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceec
Q 028444          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYG  173 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g  173 (209)
                      ..|+++|...+.+.+.....|++...+..+.+-+
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence            3499999999999998777899988888776543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.60  E-value=1.3e-15  Score=147.56  Aligned_cols=158  Identities=16%  Similarity=0.211  Sum_probs=108.9

Q ss_pred             EEEEEcCCCh-hHHHHHHHHHhCCCeEEEEEcCCCC-----CCCC----CC-CCceEEEEccCCCHHHHHHHh----c--
Q 028444            2 KILVSGASGY-LGGRLCHALLKQGHSVRALVRRTSD-----ISGL----PS-EGALELVYGDVTDYRSLVDAC----F--   64 (209)
Q Consensus         2 ~ilItG~~G~-IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~----~--   64 (209)
                      +++||||+++ ||++++++|+++|++|++.+|+.++     ++++    .. ...+..+.+|++|.+++..++    +  
T Consensus      2138 vaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~ 2217 (3089)
T 3zen_D         2138 VAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQ 2217 (3089)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCC
T ss_pred             EEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhh
Confidence            6899999999 9999999999999999999998654     2111    11 135778999999999987764    2  


Q ss_pred             -----CcCEEEEcCcc----C---C----CCCCCccch----hhhHHHHHHHHHHHHHhcC---Ccc---EEEEEcccee
Q 028444           65 -----GCHVIFHTAAL----V---E----PWLPDPSRF----FAVNVEGLKNVVQAAKETK---TVE---KIIYTSSFFA  118 (209)
Q Consensus        65 -----~~d~vi~~a~~----~---~----~~~~~~~~~----~~~n~~~~~~l~~~~~~~~---~~~---~~i~~ss~~~  118 (209)
                           ++|++|||||.    .   .    ...++++..    +++|+.++..+++.+.+.+   +..   .+|..+|. .
T Consensus      2218 ~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss-~ 2296 (3089)
T 3zen_D         2218 TESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSP-N 2296 (3089)
T ss_dssp             EEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECS-S
T ss_pred             hhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCc-c
Confidence                 47999999996    1   1    122345545    8899999999998886542   111   22222221 1


Q ss_pred             eccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc-----CCCEEEEecCceecC
Q 028444          119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-----GLPIVPVYPGVIYGP  174 (209)
Q Consensus       119 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~rp~~v~g~  174 (209)
                      .+....              ...|+.||+..+.+.+.++..     +++++.+.||++.+.
T Consensus      2297 ~g~~g~--------------~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D         2297 RGMFGG--------------DGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp             TTSCSS--------------CSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred             cccCCC--------------chHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence            111100              134999999766666665422     589999999999843

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.40  E-value=2.7e-13  Score=92.04  Aligned_cols=91  Identities=21%  Similarity=0.177  Sum_probs=73.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~   79 (209)
                      |+|+|+|+ |++|+++++.|.+.| ++|++++|++.+.+.+. ..++.++.+|+++.+.+.++++++|+|||+++..   
T Consensus         6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~---   80 (118)
T 3ic5_A            6 WNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF---   80 (118)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG---
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch---
Confidence            47999999 999999999999999 99999999876543332 2368889999999999999999999999998631   


Q ss_pred             CCCccchhhhHHHHHHHHHHHHHhcCCccEE
Q 028444           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKI  110 (209)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  110 (209)
                                   ....+++++.+.+ .+++
T Consensus        81 -------------~~~~~~~~~~~~g-~~~~   97 (118)
T 3ic5_A           81 -------------LTPIIAKAAKAAG-AHYF   97 (118)
T ss_dssp             -------------GHHHHHHHHHHTT-CEEE
T ss_pred             -------------hhHHHHHHHHHhC-CCEE
Confidence                         1456777887763 4444

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.34  E-value=1.4e-12  Score=104.26  Aligned_cols=162  Identities=15%  Similarity=0.114  Sum_probs=103.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcC----CCCCCC----CCCCCceEEEEccCCCHHHHHHHhcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRR----TSDISG----LPSEGALELVYGDVTDYRSLVDACFG   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~   65 (209)
                      |||+||||+|+||+.++..|+..|.       +|.+++++    .++++.    +... ...+ ..|+.......+++++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~-~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC-AFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT-TCTT-EEEEEEESSHHHHTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh-cccc-cCcEEEecCcHHHhCC
Confidence            5899999999999999999998885       79998876    221110    1110 0011 1344444556778999


Q ss_pred             cCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC-CccEEEEEccce---eec--cCC-ccccCCCcccccccc
Q 028444           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFF---ALG--STD-GYIADENQVHEEKYF  138 (209)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~ss~~---~~~--~~~-~~~~~e~~~~~~~~~  138 (209)
                      +|+|||+||.......+..+.+..|+..+..+++.+.+.. ...+||++|.-.   .|.  ... +.+.       .   
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~-------~---  153 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPA-------K---  153 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCG-------G---
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCH-------H---
Confidence            9999999997655445566788999999999999999884 445899998621   010  000 1111       0   


Q ss_pred             CChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~  175 (209)
                       ..++.++.....+...+++ .|++...++..+++|.+
T Consensus       154 -~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          154 -NFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             -GEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             -HEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence             1244444444555555543 36666666666677753

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.29  E-value=4.1e-11  Score=96.44  Aligned_cols=163  Identities=10%  Similarity=-0.061  Sum_probs=102.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHH-hCCCeEEEEEcCCCCCCCCCC-----------------CCceEEEEccCCCHHHHHHH
Q 028444            1 MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDISGLPS-----------------EGALELVYGDVTDYRSLVDA   62 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~-~~g~~V~~~~r~~~~~~~~~~-----------------~~~~~~~~~Dl~~~~~~~~~   62 (209)
                      +++||||||++||.+.+.+|+ ..|..++++.+..+..+....                 ...+..+.+|+++++.+.++
T Consensus        51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v  130 (401)
T 4ggo_A           51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV  130 (401)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence            379999999999999999987 679999999987654432110                 14678999999999888777


Q ss_pred             hc-------CcCEEEEcCccCCCCCC----------Cc--------------cc--------hhhhHHHHHHH-------
Q 028444           63 CF-------GCHVIFHTAALVEPWLP----------DP--------------SR--------FFAVNVEGLKN-------   96 (209)
Q Consensus        63 ~~-------~~d~vi~~a~~~~~~~~----------~~--------------~~--------~~~~n~~~~~~-------   96 (209)
                      ++       ++|+|||+++......+          +|              ..        .-+-++..|..       
T Consensus       131 i~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~  210 (401)
T 4ggo_A          131 IEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDW  210 (401)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHH
Confidence            64       58999999996411000          00              00        00111122221       


Q ss_pred             --HHHHHHhc--C-CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhc--CCCEEEEecC
Q 028444           97 --VVQAAKET--K-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPG  169 (209)
Q Consensus        97 --l~~~~~~~--~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~rp~  169 (209)
                        ...+....  . ...++|..|+..   ...-.|.         +....++.+|+..|...+.++.+  +++++.+.++
T Consensus       211 s~w~~al~~a~lla~G~siva~SYiG---se~t~P~---------Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~  278 (401)
T 4ggo_A          211 ERWIKQLSKEGLLEEGCITLAYSYIG---PEATQAL---------YRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNK  278 (401)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEECCC---CGGGHHH---------HTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred             HHHHHHHHhhhcccCCceEEEEeccC---cceeecC---------CCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcC
Confidence              22233322  1 124677776532   2111111         11135899999999998888643  5788888888


Q ss_pred             ceecCC
Q 028444          170 VIYGPG  175 (209)
Q Consensus       170 ~v~g~~  175 (209)
                      .+-++.
T Consensus       279 a~vT~A  284 (401)
T 4ggo_A          279 GLVTRA  284 (401)
T ss_dssp             CCCCTT
T ss_pred             ccccch
Confidence            888764

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.28  E-value=9e-12  Score=99.42  Aligned_cols=112  Identities=15%  Similarity=0.124  Sum_probs=80.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCC--CCCCC-CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~--~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |||+||||+|++|+.++..|+++|  .+|+++++++....  ++... ....+ .+ +.+..++.++++++|+|||+|+.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi~~ag~   86 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLIIVPAGV   86 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEEEcCCc
Confidence            689999999999999999999998  88999987654100  01000 01111 11 23345677889999999999997


Q ss_pred             CCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      .........+.+..|+..+..+++.+.+.. ++.+|+++|
T Consensus        87 ~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           87 PRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            544444456779999999999999999884 555666555

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.21  E-value=5.2e-12  Score=99.83  Aligned_cols=107  Identities=17%  Similarity=0.145  Sum_probs=75.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEc--CCCCCCC----CC----CCCceEEEEccCCCHHHHHHHhcCcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVR--RTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r--~~~~~~~----~~----~~~~~~~~~~Dl~~~~~~~~~~~~~d~   68 (209)
                      |||+||||+|++|+.++..|+..|.  ++.++++  +.++++.    +.    ....+++.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            8999999999999999999998875  6777877  4332110    00    001222222 1  1    346789999


Q ss_pred             EEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      |||+|+..........+.+..|+..+..+++++.+.. ++.+|+++|
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeC
Confidence            9999997544434455678999999999999999984 556666655

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.18  E-value=5.4e-11  Score=94.41  Aligned_cols=109  Identities=14%  Similarity=0.128  Sum_probs=76.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEc--CCCCCC-------CC-CCC-CceEEEEccCCCHHHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVR--RTSDIS-------GL-PSE-GALELVYGDVTDYRSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r--~~~~~~-------~~-~~~-~~~~~~~~Dl~~~~~~~~~~~~~d   67 (209)
                      |||+||||+|+||+.++..|+.+|.  ++.++++  +..+++       .. ... ..+++...|    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            8999999999999999999998884  6777877  432111       00 000 122222211    12456789999


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      +|||+||..........+.++.|+..+..+++++++..  +++|+++|
T Consensus        77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~S  122 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVIT  122 (313)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECS
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence            99999997654444556789999999999999999985  55555554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.15  E-value=8.3e-12  Score=97.97  Aligned_cols=75  Identities=21%  Similarity=0.271  Sum_probs=62.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC----CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++||||+|+||+++++.|+++|++|++++|+.++.+++.+.    .++.++.+|+++.+++.++++++|+||||++.
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag~  198 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI  198 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCCc
Confidence            3799999999999999999999999999999976543322110    14567889999999999999999999999974

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.06  E-value=6.3e-10  Score=77.73  Aligned_cols=101  Identities=18%  Similarity=0.232  Sum_probs=73.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCccCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~~~~~~   80 (209)
                      +++|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+... +...+.+|.++.+.+.++ +.++|+||++++.     
T Consensus         8 ~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~-----   80 (144)
T 2hmt_A            8 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIGA-----   80 (144)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEECCCS-----
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC-----
Confidence            5999997 9999999999999999999999976554443332 567788999998888776 6789999999873     


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceee
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~  119 (209)
                       +    .+.|.    .+++.+++.. ++++|..++...+
T Consensus        81 -~----~~~~~----~~~~~~~~~~-~~~ii~~~~~~~~  109 (144)
T 2hmt_A           81 -N----IQAST----LTTLLLKELD-IPNIWVKAQNYYH  109 (144)
T ss_dssp             -C----HHHHH----HHHHHHHHTT-CSEEEEECCSHHH
T ss_pred             -c----hHHHH----HHHHHHHHcC-CCeEEEEeCCHHH
Confidence             1    12232    3555566653 5677776665444

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.99  E-value=1.5e-09  Score=86.13  Aligned_cols=111  Identities=20%  Similarity=0.192  Sum_probs=79.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCC-----CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |||.|+||+|++|+.++..|+..|  .+|.++++++.+     +........+....+    ..+..++++++|+||++|
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDvVvi~a   76 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDVVVIPA   76 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCEEEECC
Confidence            899999999999999999999888  789999987521     111111001221111    134566789999999999


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      |.......+..+.+..|+.....+++.+.+......+|++|.
T Consensus        77 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           77 GVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            975444445567789999999999999988754457777753

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.98  E-value=1.3e-09  Score=75.87  Aligned_cols=73  Identities=22%  Similarity=0.310  Sum_probs=58.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+....++.++.+|.++.+.+.+. +.++|+||++.+
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            78999986 99999999999999999999998765433222112567788999998887655 678999999965

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.97  E-value=3.6e-09  Score=79.78  Aligned_cols=72  Identities=25%  Similarity=0.404  Sum_probs=53.4

Q ss_pred             CEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHH----
Q 028444            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV----   60 (209)
Q Consensus         1 m~ilItG~----------------~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~----   60 (209)
                      |++|||||                ||++|.+++++|+++|++|++++|+... ... ...++..+  |+...+++.    
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~~-~~~~~~~~--~v~s~~em~~~v~   79 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KPE-PHPNLSIR--EITNTKDLLIEMQ   79 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CCC-CCTTEEEE--ECCSHHHHHHHHH
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-ccc-CCCCeEEE--EHhHHHHHHHHHH
Confidence            68999999                9999999999999999999999997532 111 01255544  555554443    


Q ss_pred             HHhcCcCEEEEcCccC
Q 028444           61 DACFGCHVIFHTAALV   76 (209)
Q Consensus        61 ~~~~~~d~vi~~a~~~   76 (209)
                      +.+.++|++||+|+..
T Consensus        80 ~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           80 ERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHGGGCSEEEECSBCC
T ss_pred             HhcCCCCEEEEcCccc
Confidence            3446799999999964

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.96  E-value=1.1e-09  Score=91.07  Aligned_cols=73  Identities=18%  Similarity=0.196  Sum_probs=61.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+| +|++|+++++.|++.|++|++.+|+.++.+.+... .++..+++|++|.+++.++++++|+||||++.
T Consensus         5 ~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~   78 (450)
T 1ff9_A            5 SVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY   78 (450)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence            699998 89999999999999999999999986554433332 24778899999999999999999999999985

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.95  E-value=1.9e-08  Score=71.52  Aligned_cols=73  Identities=23%  Similarity=0.312  Sum_probs=60.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+++|+|+ |.+|+.+++.|.+.|++|++++|++.+.+.+....+...+.+|.++.+.+.++ +.++|+||.+.+
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            57999995 99999999999999999999999877665554223677888999998877765 678999998876

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.94  E-value=1.8e-09  Score=75.49  Aligned_cols=71  Identities=23%  Similarity=0.239  Sum_probs=58.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      +++|+|+ |.+|+++++.|.++|++|+++++++++.+.+.. .++.++.+|.++++.+.++ +.++|+||.+.+
T Consensus         8 ~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            8 EYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            6999997 999999999999999999999998765433322 3688999999999988876 467999998765

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.94  E-value=1.9e-09  Score=87.32  Aligned_cols=92  Identities=17%  Similarity=0.217  Sum_probs=72.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |||+|.|+ |++|+.+++.|.+ .++|.+.+|+..+++.+.+  .+..++.|+.|.+++.++++++|+||+++++.    
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~--~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~----   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE--FATPLKVDASNFDKLVEVMKEFELVIGALPGF----   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT--TSEEEECCTTCHHHHHHHHTTCSEEEECCCGG----
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc--cCCcEEEecCCHHHHHHHHhCCCEEEEecCCc----
Confidence            89999998 9999999998854 6899999988665544433  57788999999999999999999999998742    


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                            +      -..++++|.+.+  .+++-+|
T Consensus        89 ------~------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           89 ------L------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             ------G------HHHHHHHHHHHT--CEEEECC
T ss_pred             ------c------cchHHHHHHhcC--cceEeee
Confidence                  1      235778888774  4666655

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.89  E-value=1.3e-08  Score=76.47  Aligned_cols=70  Identities=20%  Similarity=0.276  Sum_probs=53.9

Q ss_pred             CEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH--
Q 028444            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA--   62 (209)
Q Consensus         1 m~ilItG~----------------~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--   62 (209)
                      ++++||||                ||+||++++++|+++|++|++++++.. +. .+  .++.  ..|+++.+++.+.  
T Consensus         9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~~--~g~~--~~dv~~~~~~~~~v~   82 (226)
T 1u7z_A            9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-TP--PFVK--RVDVMTALEMEAAVN   82 (226)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-CC--TTEE--EEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-cC--CCCe--EEccCcHHHHHHHHH
Confidence            47999999                799999999999999999999988652 21 11  1443  4688887666544  


Q ss_pred             --hcCcCEEEEcCccC
Q 028444           63 --CFGCHVIFHTAALV   76 (209)
Q Consensus        63 --~~~~d~vi~~a~~~   76 (209)
                        +.++|++|||||..
T Consensus        83 ~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           83 ASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHGGGCSEEEECCBCC
T ss_pred             HhcCCCCEEEECCccc
Confidence              35799999999964

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.80  E-value=1.7e-09  Score=88.68  Aligned_cols=74  Identities=20%  Similarity=0.304  Sum_probs=61.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEEEcCCCCCCCCCCC------CceEEEEccCCCHHHHHHHhcC--cCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSE------GALELVYGDVTDYRSLVDACFG--CHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~--~d~v   69 (209)
                      |+|+|+|+ |+||+++++.|++.|   .+|++.+|+.++.+.+...      .++..+.+|++|.+++.+++++  +|+|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            48999998 999999999999998   3899999986654332211      2588899999999999999987  8999


Q ss_pred             EEcCcc
Q 028444           70 FHTAAL   75 (209)
Q Consensus        70 i~~a~~   75 (209)
                      |||++.
T Consensus        81 in~ag~   86 (405)
T 4ina_A           81 LNIALP   86 (405)
T ss_dssp             EECSCG
T ss_pred             EECCCc
Confidence            999984

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.80  E-value=7.4e-09  Score=82.63  Aligned_cols=110  Identities=16%  Similarity=0.086  Sum_probs=77.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--e-----EEEEEcCCC--C-------CCCCCCCCceEEEEccCCCHHHHHHHhc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--S-----VRALVRRTS--D-------ISGLPSEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~-----V~~~~r~~~--~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      |||+||||+|+||+.++..|+..|.  +     +.+++++..  +       +..... .-..    ++.......+.++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-~~~~----~~~~~~~~~~~~~   78 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLK----DVIATDKEEIAFK   78 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEE----EEEEESCHHHHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-cccC----CEEEcCCcHHHhC
Confidence            5899999999999999999988774  5     888887531  1       111100 0111    1111223356689


Q ss_pred             CcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCcc-EEEEEcc
Q 028444           65 GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSS  115 (209)
Q Consensus        65 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~ss  115 (209)
                      ++|+||++||..+....+..+.++.|+..+..+++.+.+..... +++.+|.
T Consensus        79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            99999999997655445667789999999999999999885334 5777764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.77  E-value=9.4e-09  Score=77.22  Aligned_cols=73  Identities=16%  Similarity=0.173  Sum_probs=60.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+|+|+|+ |.+|+.+++.|.++|++|+++++++++.+.+....++.++.+|.++.+.+.++ +.++|+||-+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            89999996 99999999999999999999999876544332223678999999999999886 678999997654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.77  E-value=2.4e-09  Score=89.19  Aligned_cols=73  Identities=18%  Similarity=0.251  Sum_probs=60.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |++|+++++.|++. |++|++.+|+.++.+.+....++..+.+|+.|.+++.++++++|+|||+++.
T Consensus        25 ~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           25 NVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             EEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             EEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            6999997 99999999999998 7899999998655433322125677889999999999999999999999985

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.59  E-value=6.2e-08  Score=68.61  Aligned_cols=72  Identities=22%  Similarity=0.314  Sum_probs=57.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCCC--CCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      +++|+|+ |.+|+.+++.|.+.|++|+++++++ ++.+.+..  ..++.++.+|.++++.+.++ ++++|+||-+.+
T Consensus         5 ~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            6999985 9999999999999999999999974 21111110  12688999999999999887 789999997764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.57  E-value=2e-08  Score=80.34  Aligned_cols=107  Identities=12%  Similarity=0.076  Sum_probs=72.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----CC----CCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~----~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|++|+||+.++..++..|  .+|++++.+.++++.    +.    ...++.+       .....++++++|+||
T Consensus         9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~dADvVv   81 (343)
T 3fi9_A            9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALTDAKYIV   81 (343)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHTTEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhCCCCEEE
Confidence            489999999999999999999988  589999886542211    00    0011111       123356688999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCcc-EEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~s  114 (209)
                      .+||.......+..+.++.|+.....+.+.+.+..... .++.+|
T Consensus        82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             ECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            99997544334455678999999999999999875334 356665

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.57  E-value=9.1e-08  Score=69.73  Aligned_cols=72  Identities=17%  Similarity=0.188  Sum_probs=59.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH--hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA--CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~~~d~vi~~a~   74 (209)
                      |+++|+| .|.+|+.+++.|.+. |++|+++++++++.+.+.. .++..+.+|.++.+.+.++  +.++|+||.+.+
T Consensus        40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            4789998 599999999999999 9999999998765433322 2677889999999888877  788999998765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.56  E-value=1.7e-07  Score=65.36  Aligned_cols=71  Identities=17%  Similarity=0.200  Sum_probs=58.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      +++|+|+ |.+|+.+++.|.+.|++|+++++++++.+.+.. .++..+.+|.++++.+.++ +.++|+||-+.+
T Consensus         9 ~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            9 HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            6899995 999999999999999999999998765543332 3788999999999988775 568999987754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.49  E-value=5.8e-08  Score=71.64  Aligned_cols=72  Identities=17%  Similarity=0.220  Sum_probs=50.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHH---HHHHhc--CcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d~vi~~a~   74 (209)
                      ++++|+||+|+||+++++.+...|++|++++|++++.+..... +... ..|.++.+.   +.+...  ++|+||+|+|
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL-GVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-CCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            3699999999999999999999999999999876543222111 2222 236665433   333332  5899999987

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.41  E-value=4.7e-07  Score=71.96  Aligned_cols=106  Identities=17%  Similarity=0.266  Sum_probs=75.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC----CC---C-C-CceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LP---S-E-GALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~---~-~-~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|+.++..|+..|.  +|++++++.++++.    +.   . . ..+.....|       .+.++++|+|
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aDvV   77 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDADIV   77 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCCEE
Confidence            58999995 9999999999999886  89999886543211    10   0 0 133443333       2367899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |.+||.......+..+.++.|+.....+++.+.+......++.+|
T Consensus        78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            999996543334455678999999999999998875444666665

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.40  E-value=1.4e-07  Score=74.00  Aligned_cols=108  Identities=19%  Similarity=0.134  Sum_probs=76.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCC-------CCC--CCCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS-------GLP--SEGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~-------~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|.+++..|+..|.  +|.++++++++++       ...  ......+...  +|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            89999998 9999999999999887  8999998765432       000  0012222211  12    3467899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      |.+||.......+..+.++.|......+.+.+.+......++.+|.
T Consensus        74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            9999975443344556789999999999999998754456666663

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.39  E-value=1.8e-08  Score=75.19  Aligned_cols=72  Identities=24%  Similarity=0.290  Sum_probs=49.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEE-ccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-GDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|+|+||+|.+|+++++.|.+.|++|++++|++++.+.+....+. .+. .|+. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            8999999999999999999999999999999976543222110000 000 1222 1234556778999999975

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.37  E-value=9.5e-08  Score=75.91  Aligned_cols=106  Identities=12%  Similarity=0.128  Sum_probs=64.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCC-------CCCC-CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS-------GLPS-EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~-------~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|+.++..|+..|.  ++.+++++.++++       .... ...+.....|       .+.++++|+||
T Consensus        10 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aDiVv   81 (326)
T 3vku_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDADLVV   81 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCCEEE
Confidence            58999996 9999999999998886  8999988654322       1110 0134444332       23578999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+||.......+..+.++.|+.-...+++.+.+......++.+|
T Consensus        82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            99997543334455678899999999999998875444566665

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=98.37  E-value=2.9e-07  Score=72.81  Aligned_cols=107  Identities=21%  Similarity=0.164  Sum_probs=73.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC-----CCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++++++.    +..     .........|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            89999996 9999999999998886  89999988754321    000     0122232112  1    2467899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |.+||.......+..+.++.|+.-...+.+.+.+......++.+|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            999997544334556788999999999999999875445566666

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=98.35  E-value=2.1e-07  Score=72.81  Aligned_cols=108  Identities=21%  Similarity=0.199  Sum_probs=76.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----CC-----CCCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP-----SEGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |+||+.++-.|+.++  .++.+++.++++.+-    +.     ..........+  |.    +.++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCEE
Confidence            99999995 999999999998877  479998876532110    00     00112222211  22    247899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      |-.||..+....+..+.++.|..-...+.+.+.+......++.+|.
T Consensus        74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            9999987665567778899999999999999998854455666663

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.35  E-value=3.7e-07  Score=72.12  Aligned_cols=111  Identities=25%  Similarity=0.181  Sum_probs=76.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-C--CeEEEEEcCCCCCC----CCCCC-CceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-G--HSVRALVRRTSDIS----GLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g--~~V~~~~r~~~~~~----~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |||.|+||+|.||+.++..|..+ +  .++.+++.++ +.+    ++... ..++.....-++   ..+.++++|+||-+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~---~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGED---ATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSC---CHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCC---cHHHhCCCCEEEEe
Confidence            89999999999999999988765 4  5888888865 211    01110 112222110011   13467899999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      ||..+....+..+.++.|......+.+.+.+......++.+|.
T Consensus        77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            9976544455667899999999999999988754456776663

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.33  E-value=2e-07  Score=70.68  Aligned_cols=70  Identities=14%  Similarity=0.061  Sum_probs=58.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+++|+|+ |.+|+.+++.|.+.|+ |++++++++..+.+.  .++.++.+|.++++.+.++ ++++|.||.+.+
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            47999996 9999999999999999 999988876543333  3688999999999998887 789999997754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.33  E-value=1.2e-07  Score=76.85  Aligned_cols=73  Identities=12%  Similarity=0.116  Sum_probs=56.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |.||+.+++.|...|++|++++|++++.+.+.+..+.. +.+|.++.+++.++++++|+||++++.
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            47999998 99999999999999999999999865432221101222 456778888888888999999999985

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.27  E-value=1.3e-06  Score=69.28  Aligned_cols=107  Identities=20%  Similarity=0.217  Sum_probs=75.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCCC-----CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSE-----GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+| +|.+|..++..|+..|. +|.++++++++++.    +...     ....+...+  |.    ++++++|+||
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~~aDvVI   78 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLENSDVVI   78 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHCCCCEEE
Confidence            4899999 59999999999999887 99999988764321    1100     122222111  22    4678999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+||..........+.+..|+.....+++.+.+......+|.+|
T Consensus        79 i~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           79 VTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99997544334455678899999999999998875334666665

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.26  E-value=1.2e-06  Score=69.60  Aligned_cols=106  Identities=20%  Similarity=0.217  Sum_probs=73.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCC-----CCceEEE-EccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS-----EGALELV-YGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~-----~~~~~~~-~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|..++..|+..|. +|+++++++++++.    +..     .....+. ..|   .    ++++++|+|
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----~a~~~aDiV   79 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----AAIEGADVV   79 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----HHHCCCCEE
Confidence            48999997 9999999999999998 99999988764321    000     0012222 122   2    467899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |.++|.......+..+.+..|+.....+++.+.+......+|.+|
T Consensus        80 Iiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           80 IVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             EECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            999997544334455678899999999999998875334666665

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=98.22  E-value=7.6e-07  Score=70.86  Aligned_cols=108  Identities=17%  Similarity=0.148  Sum_probs=76.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC-------CCC-CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG-------LPS-EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|+..|.  ++++++++.++++.       ... ......+..  .|.    +.++++|+||
T Consensus        20 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~----~~~~~aDiVv   92 (331)
T 4aj2_A           20 NKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY----SVTANSKLVI   92 (331)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----GGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH----HHhCCCCEEE
Confidence            58999997 9999999999999886  89999886542211       000 001122222  133    2478999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      .+||..+....+..+.++.|+.-...+.+.+.+......++.+|.
T Consensus        93 i~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           93 ITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999976554456677899999999999999998743456666663

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.21  E-value=2.4e-06  Score=67.76  Aligned_cols=106  Identities=20%  Similarity=0.174  Sum_probs=69.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCCC----CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPSE----GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++-.|+..|.  +|.+++.+.++++.    +...    ..+++..   .+    .++++++|+||
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDvVi   79 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDVIV   79 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCEEE
Confidence            57999997 9999999999999886  89999987655431    0000    1222221   12    34578999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+++..........+.+..|+.....+++.+.+......+|.+|
T Consensus        80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99996433223344677899999999999998874334455543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.20  E-value=1.5e-05  Score=63.54  Aligned_cols=106  Identities=16%  Similarity=0.111  Sum_probs=71.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCC-----------CCCCceEEEEccCCCHHHHHHHhcCcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL-----------PSEGALELVYGDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   68 (209)
                      |||.|+|| |.+|..++..|+..|+ +|.++++++++++..           ....++.. .   +|   +.++++++|+
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~ea~~~aDi   81 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YEAALTGADC   81 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HHHHhCCCCE
Confidence            68999997 9999999999999998 999999886543320           00011111 1   22   3446799999


Q ss_pred             EEEcCccCCCCCC-----CccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           69 IFHTAALVEPWLP-----DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        69 vi~~a~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ||.+++.......     ...+....|+.....+.+.+.+......+|.+|
T Consensus        82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9999986433222     344567788888899999888874223444443

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.19  E-value=1.5e-06  Score=68.59  Aligned_cols=103  Identities=18%  Similarity=0.165  Sum_probs=66.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCC-----CCceEEEE-ccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS-----EGALELVY-GDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~-----~~~~~~~~-~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|..++..|+..|+ +|.++++++++++.    +..     .....+.. .|   .    +.++++|+|
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a~~~aD~V   74 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN---Y----ADTANSDVI   74 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---G----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC---H----HHHCCCCEE
Confidence            48999998 9999999999999996 88888887643321    000     00111111 22   2    357899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEE
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~  112 (209)
                      |.+++..........+....|......+.+.+.+.. +..++.
T Consensus        75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi  116 (309)
T 1ur5_A           75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVII  116 (309)
T ss_dssp             EECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEE
T ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence            999986433323334567888888899999998874 444443

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.19  E-value=1.4e-06  Score=68.84  Aligned_cols=106  Identities=16%  Similarity=0.160  Sum_probs=73.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCC--CCCCC----CCC-----CCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT--SDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~--~~~~~----~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      ||.|+|+ |.+|..++..|+..|. +|+++++++  ++.+.    +..     .....+...  .|    .+.++++|+|
T Consensus        10 kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDvV   82 (315)
T 3tl2_A           10 KVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD----YADTADSDVV   82 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC----GGGGTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC----HHHhCCCCEE
Confidence            7999996 9999999999999998 999999873  22110    000     001111111  11    2357899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |.+||.......+..+.++.|+.....+.+.+.+......++.+|
T Consensus        83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            999997544444556788999999999999998875344666666

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.18  E-value=2.2e-06  Score=70.30  Aligned_cols=72  Identities=24%  Similarity=0.371  Sum_probs=60.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      |+|+|+|. |-+|+.+++.|.+.|++|++++++++..+.+.. .++..+.+|.++++.+..+ +.++|+||-+.+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            57999995 999999999999999999999998765443332 3688899999999999887 678999987754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.15  E-value=2.5e-06  Score=66.11  Aligned_cols=32  Identities=28%  Similarity=0.574  Sum_probs=26.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh-CCCeEEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVR   32 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~r   32 (209)
                      |||.|+|++|.+|+.+++.+.+ .|++++++.+
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            5899999999999999998874 5788885544

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.13  E-value=1.3e-06  Score=70.00  Aligned_cols=71  Identities=23%  Similarity=0.216  Sum_probs=50.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh----c-CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC----F-GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----~-~~d~vi~~a~   74 (209)
                      +++|+|++|.||.++++.+...|++|++++|++.+.+.... .+... ..|+++.+++.+.+    . ++|+||+++|
T Consensus       172 ~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  247 (347)
T 2hcy_A          172 WVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVSV  247 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cCCce-EEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence            69999999999999999999999999999988765432211 12322 23766433333322    2 6899999998

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=98.13  E-value=1.9e-05  Score=63.06  Aligned_cols=108  Identities=16%  Similarity=0.120  Sum_probs=74.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCCC---------CCCCCCCCceEEEEccCCCHHHHHHHhcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD---------ISGLPSEGALELVYGDVTDYRSLVDACFG   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~~---------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   65 (209)
                      ||.|+||+|.||+.++-.|.....       ++.+++.++..         +...........+..+  |   ...++++
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~---~~~a~~~  100 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--D---PRVAFDG  100 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--C---HHHHTTT
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--C---hHHHhCC
Confidence            799999999999999998876542       67788765321         1111111112222221  2   2457899


Q ss_pred             cCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEc
Q 028444           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTS  114 (209)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~s  114 (209)
                      +|+||-.||..+....+..+.++.|..-...+.+.+.+...+ .+++.+|
T Consensus       101 advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A          101 VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            999999999876655667788999999999999999876333 3556665

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.13  E-value=5.4e-07  Score=75.03  Aligned_cols=71  Identities=23%  Similarity=0.401  Sum_probs=59.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~   72 (209)
                      |+|+|.|+ |-+|+.+++.|.++|++|++++++++..+.+....++..+.+|.++++.++++ ++++|.+|-+
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            89999995 99999999999999999999999877655443333688999999999999887 4679988854

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=98.12  E-value=1.2e-06  Score=69.04  Aligned_cols=106  Identities=17%  Similarity=0.216  Sum_probs=66.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC----CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|+..|+  +|.++++++++++.    +..    .....+...   +.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHG---GH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEE---CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEEC---CH----HHhCCCCEEE
Confidence            89999997 9999999999999998  99999987542210    000    012222221   22    3578999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+++..........+.+..|+.....+++.+.+......+|.+|
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99986433223344667889999999999888774233455544

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=98.12  E-value=2.6e-06  Score=67.33  Aligned_cols=107  Identities=21%  Similarity=0.175  Sum_probs=71.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCCCCCCCC----CC-----CceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLP----SE-----GALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~----~~-----~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|..++..|++.  |++|+++++++++++...    ..     ....+...  +|.+   . ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~---~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA---D-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG---G-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHH---H-HCCCCEE
Confidence            89999997 99999999999885  799999999865433110    00     01111110  2322   2 6889999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-+++..........+.+..|+.....+++.+.+......+|.+|
T Consensus        74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            999985332222344567788888899999888774334556654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.11  E-value=7e-07  Score=71.16  Aligned_cols=71  Identities=21%  Similarity=0.217  Sum_probs=49.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHH----HHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----VDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~----~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.||.++++.+...|++|++++|++++.+.+.. .+.. ...|.++.+++    .++. .++|++|+|+|
T Consensus       148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             EEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence            69999999999999999999999999999987654332211 1222 22466652222    2222 25899999998

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.07  E-value=1.9e-06  Score=68.10  Aligned_cols=73  Identities=14%  Similarity=0.191  Sum_probs=54.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcC---CCCCCCCCCC----CceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR---TSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      +++|+|+ |++|++++..|.+.|. +|+++.|+   .++.+++.+.    .++.....++.+.+++.+.+.++|+|||+.
T Consensus       156 ~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaT  234 (315)
T 3tnl_A          156 KMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNAT  234 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECc
Confidence            6999996 8999999999999998 89999998   3333222110    123444557777777888888999999987


Q ss_pred             cc
Q 028444           74 AL   75 (209)
Q Consensus        74 ~~   75 (209)
                      +.
T Consensus       235 p~  236 (315)
T 3tnl_A          235 GV  236 (315)
T ss_dssp             ST
T ss_pred             cC
Confidence            64

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=98.06  E-value=1.5e-06  Score=68.95  Aligned_cols=106  Identities=14%  Similarity=0.192  Sum_probs=69.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC----CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|+..+.  ++.+++++.++++.    +..    ...+++.. |  +    .++++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            58999998 9999999999988775  89999886543221    000    01233332 2  2    34578999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..++..........+.+..|+.....+++.+.+......+|.+|
T Consensus        78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99997533333445678899999999999998875445666665

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=98.05  E-value=7.4e-06  Score=65.05  Aligned_cols=107  Identities=16%  Similarity=0.178  Sum_probs=70.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCC-----CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~----~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|+..|+ +|.++++++++++.    +..     .....+...  +|   . ++++++|+||
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD~Vi   77 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLAGADVVI   77 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEEE
Confidence            48999997 9999999999999997 88888887654321    000     001111110  12   2 3578999999


Q ss_pred             EcCccCCCCCCC-----ccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPD-----PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~-----~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+++........     ..+....|+.-...+.+.+.+......+|.+|
T Consensus        78 ~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           78 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999864332222     34567778888888888888774333455554

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=98.03  E-value=1.2e-05  Score=63.82  Aligned_cols=107  Identities=15%  Similarity=0.048  Sum_probs=75.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCC--------CCCCceEEE-EccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGL--------PSEGALELV-YGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~--------~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|+.++..|+..|.  +|.+++.+.++++..        ......... ..|..       .++++|+|
T Consensus        22 ~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------~~~daDiV   93 (330)
T 3ldh_A           22 NKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------VSAGSKLV   93 (330)
T ss_dssp             CEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------SCSSCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------HhCCCCEE
Confidence            58999998 9999999999999886  899998865422110        000011222 23432       26899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      |-+||.......+..+.+..|+.-...+.+.+.+......++.+|.
T Consensus        94 IitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           94 VITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             EECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            9999976554455667889999999999999988743445666663

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=98.03  E-value=2.3e-06  Score=67.56  Aligned_cols=106  Identities=14%  Similarity=0.120  Sum_probs=74.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCC----CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++-.|+..+  .++.+++.+.++++.    +..    ...+++.. +  +    .++++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            89999998 999999999998887  689999887543221    000    01233333 2  2    33578999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..++..........+.+..|......+++.+.+......+|.+|
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99997543333445678889999999999998874445666665

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.02  E-value=4e-07  Score=70.64  Aligned_cols=70  Identities=20%  Similarity=0.149  Sum_probs=47.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCce--EEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL--ELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++++|+|+ |++|+++++.|++.|.+|++..|+.++.+.+....+.  .....|+   +++.+  .++|+||++++..
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCSCG
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCCCC
Confidence            47999997 7899999999999999999999986543322111000  1112232   22222  5899999999853

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=98.01  E-value=1.7e-06  Score=68.79  Aligned_cols=106  Identities=14%  Similarity=0.172  Sum_probs=71.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC----CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~----~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++-.|+..+.  ++.+++++.++++.    +..    ...+++.. |  +    .++++++|+||
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDvVi   81 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADLVV   81 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999998 9999999999988774  89999886543211    000    01333332 2  2    34578999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..++..........+.+..|+.....+++.+.+......+|.+|
T Consensus        82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99997543333445678889999999999988875445666665

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.00  E-value=1.3e-06  Score=70.22  Aligned_cols=72  Identities=22%  Similarity=0.231  Sum_probs=49.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHhc-CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF-GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~-~~d~vi~~a~   74 (209)
                      +++|+||+|.||..+++.+...|+ +|+++++++++.+.+....+... ..|..+.+   .+.+... ++|++|+|+|
T Consensus       163 ~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~G  239 (357)
T 2zb4_A          163 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYFDNVG  239 (357)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEEECCC
Confidence            699999999999999999999999 99999987544332211112222 24665532   2333322 5999999998

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.97  E-value=3.9e-06  Score=66.47  Aligned_cols=106  Identities=16%  Similarity=0.247  Sum_probs=71.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCC--------CCCC-CceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG--------LPSE-GALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~--------~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|..++..|+..|.  +|++++++.++++.        .... ..+.+.. |  +    .+.++++|+|
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aDvV   78 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDADLV   78 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCCEE
Confidence            58999998 9999999999988773  89999987542211        0000 1233332 1  2    2457899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |.+++..........+.+..|......+++.+.+......++.+|
T Consensus        79 iia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           79 VICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             EECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            999997543333445667888888888998888774333455544

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.96  E-value=1.3e-06  Score=69.91  Aligned_cols=72  Identities=17%  Similarity=0.148  Sum_probs=49.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH----HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY----RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.||..+++.+...|++|++++|++.+.+.+....+... ..|.++.    +.+.++. .++|+||+++|
T Consensus       158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFENVG  234 (345)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence            69999999999999999999999999999987654332221112322 2355543    2233322 36999999988

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.96  E-value=2.1e-06  Score=68.93  Aligned_cols=71  Identities=17%  Similarity=0.145  Sum_probs=50.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHH---HHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d~vi~~a~   74 (209)
                      +++|+||+|.||..+++.+...|++|++++|++++.+.... .+... ..|..+.+.   +.+...  ++|+||+|+|
T Consensus       173 ~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          173 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-cCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence            69999999999999999999999999999987654332211 12222 235555433   333333  6999999998

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.94  E-value=1.1e-05  Score=57.29  Aligned_cols=67  Identities=18%  Similarity=0.089  Sum_probs=49.3

Q ss_pred             CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--------CCceEEEEccCCCH--HHHHHHhc------CcCEEEEc
Q 028444            9 SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--------EGALELVYGDVTDY--RSLVDACF------GCHVIFHT   72 (209)
Q Consensus         9 ~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~Dl~~~--~~~~~~~~------~~d~vi~~   72 (209)
                      +|.++.+.++.|.+.|++|++..|+.......+.        ...+..+.+|++++  +++.++++      +-|++|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            4689999999999999999998886554322110        12456778899998  88766553      23999999


Q ss_pred             Ccc
Q 028444           73 AAL   75 (209)
Q Consensus        73 a~~   75 (209)
                      ||.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            994

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.93  E-value=1.6e-06  Score=69.09  Aligned_cols=71  Identities=13%  Similarity=0.130  Sum_probs=49.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d~vi~~a~   74 (209)
                      +++|+||+|.||.++++.+...|++|++++|++.+.+.+... +... ..|.++.+   .+.+..  .++|+||+|+|
T Consensus       148 ~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g  223 (333)
T 1wly_A          148 YVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-GCHH-TINYSTQDFAEVVREITGGKGVDVVYDSIG  223 (333)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence            699999999999999999999999999999976443322111 2222 23555533   333333  26899999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.92  E-value=1.6e-06  Score=68.94  Aligned_cols=71  Identities=13%  Similarity=0.096  Sum_probs=49.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHH---HHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~~d~vi~~a~   74 (209)
                      +++|+||+|.||..+++.+...|++|++++|++.+.+.+... +... ..|.++.+.   +.+...  ++|+||+|+|
T Consensus       143 ~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          143 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQ-VINYREEDLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence            699999999999999999999999999999876543222111 2221 235555433   333332  5899999998

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.92  E-value=1.2e-05  Score=64.00  Aligned_cols=70  Identities=13%  Similarity=0.059  Sum_probs=58.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      ++++|.|+ |.+|+.+++.|.++|+ |+++++++++.+ +.. .++..+.+|.+|++.+.++ ++++|.||-+.+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            36999995 9999999999999999 999998877654 332 4789999999999999887 788999987654

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.91  E-value=1.6e-05  Score=63.35  Aligned_cols=105  Identities=17%  Similarity=0.107  Sum_probs=70.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC-----------CCCceEEEEccCCCHHHHHHHhcCcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-----------SEGALELVYGDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~d~   68 (209)
                      |||.|+|| |.+|..++..|+..|+ +|++++++.++++...           ...++... .|      . ++++++|+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD~   85 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNSDV   85 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCCCE
Confidence            58999997 9999999999999998 9999998866433100           00112111 22      2 35789999


Q ss_pred             EEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ||-+++..........+....|+.-...+.+.+.+......+|.+|
T Consensus        86 VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           86 VIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999986433222333556778888888888888764323455554

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.89  E-value=3.2e-05  Score=60.03  Aligned_cols=67  Identities=16%  Similarity=0.174  Sum_probs=51.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |++|++++..|.+.|. +|+++.|+.++.+.+..  ++...     ..+++.+++.++|+||++-+.
T Consensus       118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--~~~~~-----~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--NINKI-----NLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--CCEEE-----CHHHHHHTGGGCSEEEECCC-
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--hcccc-----cHhhHHHHhcCCCEEEECccC
Confidence            36899996 8999999999999998 89999999877766554  22221     345566778899999998653

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.89  E-value=1.9e-05  Score=62.49  Aligned_cols=106  Identities=14%  Similarity=0.220  Sum_probs=72.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----CC----CC-CceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP----SE-GALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~----~~-~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|..++..|+..|  .+|.+++.++++++.    +.    .. ..+++.. |  +    .++++++|+|
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   78 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDADLV   78 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCCEE
Confidence            48999998 999999999998888  489998876532211    00    00 1223332 2  2    3457899999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |.+++..........+.+..|......+++.+.+......+|.+|
T Consensus        79 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           79 VICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999997543334444667889999999999998874334555554

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.88  E-value=3.3e-06  Score=67.31  Aligned_cols=71  Identities=20%  Similarity=0.258  Sum_probs=49.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-CCCCceEEEEccCCCHHH---HHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYRS---LVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~Dl~~~~~---~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.||..+++.+...|++|++++|++++.+.+ ... +...+ .|..+.+.   +.+.. .++|+||+|+|
T Consensus       152 ~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          152 TVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-GFDGA-IDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CCSEE-EETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCCEE-EECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            699999999999999999999999999999876554332 121 33222 35554332   22222 36999999998

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.87  E-value=2.9e-05  Score=61.46  Aligned_cols=108  Identities=21%  Similarity=0.211  Sum_probs=70.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC---------CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE---------GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~---------~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|++.|+ +|+++++++++++.....         ....+...  +|.    ++++++|+||
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~----~a~~~aDiVi   77 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DDY----ADISGSDVVI   77 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CCH----HHhCCCCEEE
Confidence            47999997 9999999999999998 999999886543321000         00111110  122    3568999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      .+++..........+.+..|......+++.+.+......+|.+|.
T Consensus        78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999864433333445566777778888888877643334555553

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.87  E-value=2.3e-06  Score=68.76  Aligned_cols=72  Identities=7%  Similarity=-0.050  Sum_probs=50.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHhc--CcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d~vi~~a~~   75 (209)
                      +++|+||+|.||.++++.+...|++|++++|++++.+.+.. .+... ..|..+.+   .+.+...  ++|++|+|+|.
T Consensus       165 ~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-LGAAA-GFNYKKEDFSEATLKFTKGAGVNLILDCIGG  241 (354)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE-EEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence            69999999999999999999999999999987654332211 12221 23555433   3333332  68999999983

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.85  E-value=1.3e-05  Score=64.55  Aligned_cols=110  Identities=13%  Similarity=0.039  Sum_probs=72.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--e---EEEEEcCCCC-----------CCCCCCCCceEEEEccCCCHHHHHHHhc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--S---VRALVRRTSD-----------ISGLPSEGALELVYGDVTDYRSLVDACF   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~---V~~~~r~~~~-----------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   64 (209)
                      +||.|+||+|+||++++-.|+..+.  +   +.+...+.+.           +..... .-..-+..  .+  .-...++
T Consensus        33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~-p~~~~v~i--~~--~~y~~~~  107 (375)
T 7mdh_A           33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSI--GI--DPYEVFE  107 (375)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEE--ES--CHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh-hhcCCcEE--ec--CCHHHhC
Confidence            3799999999999999999988763  2   6665433221           111110 01111111  11  1245679


Q ss_pred             CcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhc-CCccEEEEEcc
Q 028444           65 GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSS  115 (209)
Q Consensus        65 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~ss  115 (209)
                      ++|+||-.||..+....+..+.++.|+.-...+.+.+.+. .....++.+|.
T Consensus       108 daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          108 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999999999765444566678999999999999999875 33456666663

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.85  E-value=1.7e-05  Score=62.89  Aligned_cols=106  Identities=18%  Similarity=0.219  Sum_probs=70.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCC--------CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSE--------GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|++.|+  +|+++++++++++.....        ....+..   +|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            89999997 9999999999999998  999999875433221100        0112221   232    3468999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+++..........+....|+.....+++.+.+......+|.+|
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99885432222234566778888888888888764333455554

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.83  E-value=1.2e-05  Score=60.06  Aligned_cols=64  Identities=23%  Similarity=0.210  Sum_probs=48.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| +|.+|+++++.|.+.|++|++++|+.++.+.+... ++...        +..++++++|+||.+..
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~--------~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQVT--------FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-TSEEE--------EHHHHTTSCSEEEECSC
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcee--------cHHHHHhCCCEEEECCC
Confidence            6899999 89999999999999999999999986544333222 33331        23456789999998865

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.79  E-value=6.5e-07  Score=62.62  Aligned_cols=69  Identities=17%  Similarity=0.189  Sum_probs=48.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |.+|+.+++.|.+.|++|++.+|+.++.+.+....+....  +..   ++.+++.++|+||.+.+.
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~---~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV--LIN---DIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE--ECS---CHHHHHHTCSEEEECSCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE--eec---CHHHHhcCCCEEEEeCCC
Confidence            57999995 9999999999999999999999986654332221122221  222   345567889999998774

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.77  E-value=3.6e-06  Score=67.95  Aligned_cols=73  Identities=14%  Similarity=0.110  Sum_probs=52.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      .+++|+|+ |.+|+.+++.+...|.+|++++|++++++.+.+. ....+..+..+.+.+.+.+.++|+||++++.
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL-FGSRVELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh-hCceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            37999998 9999999999999999999999986654332111 0000111223456677777899999999875

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.76  E-value=5.7e-06  Score=66.14  Aligned_cols=71  Identities=11%  Similarity=0.007  Sum_probs=50.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d~vi~~a~   74 (209)
                      +++|+|++|.||..+++.+...|++|++++|++.+.+.+... +... ..|.++.+   .+.++..  ++|+||+++|
T Consensus       169 ~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  244 (343)
T 2eih_A          169 DVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-GADE-TVNYTHPDWPKEVRRLTGGKGADKVVDHTG  244 (343)
T ss_dssp             EEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSE-EEETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCCE-EEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence            699999999999999999999999999999876543322111 2222 23665532   3444432  6899999998

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.74  E-value=8e-06  Score=67.78  Aligned_cols=106  Identities=19%  Similarity=0.214  Sum_probs=61.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CceE-EE-----EccCCCHHHHHHHhcCcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALE-LV-----YGDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~------~~~~-~~-----~~Dl~~~~~~~~~~~~~d~   68 (209)
                      |||.|+| .|.+|..++..|++.|++|++++|++++.+.+...      .+.. .+     .+.+.-..+..++++++|+
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            6899998 59999999999999999999999986543322110      0000 00     0001101123456788999


Q ss_pred             EEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEE
Q 028444           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT  113 (209)
Q Consensus        69 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~  113 (209)
                      ||-+.+.......      ..|+.....+++.+.+..+...+|..
T Consensus        82 ViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~  120 (450)
T 3gg2_A           82 IFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVT  120 (450)
T ss_dssp             EEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred             EEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEE
Confidence            9988764211111      23334455555666554444454433

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.74  E-value=4.3e-06  Score=65.67  Aligned_cols=72  Identities=19%  Similarity=0.191  Sum_probs=50.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |.+|++++..|.+.|. +|++..|+.++.+.+.+..+...  .+..+.+++.+.+.++|+||++.+.
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCT
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCC
Confidence            47999996 8899999999999997 99999998655432211100000  0122335666778899999999885

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.73  E-value=2.4e-05  Score=61.72  Aligned_cols=106  Identities=18%  Similarity=0.179  Sum_probs=69.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCC---------CceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSE---------GALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~---------~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+| +|.+|..++..|++.|  ++|++++|+.++++.....         ..+.....   |.    +.++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DW----AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CH----HHhCCCCEE
Confidence            5899999 7999999999999999  7999999976433221100         01232222   22    356899999


Q ss_pred             EEcCccCCC----CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-+++....    ......+.+..|+.....+++.+.+......+|.+|
T Consensus        74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            999885331    112334567788888888888887764333455544

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.72  E-value=2.8e-05  Score=60.50  Aligned_cols=65  Identities=17%  Similarity=0.206  Sum_probs=46.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+|+||.+|+.+++.|.+.|++|++++|++++.+.+.. .++     +..+   ..++++++|+||.+..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~g~-----~~~~---~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-MGI-----PLTD---GDGWIDEADVVVLALP   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-TTC-----CCCC---SSGGGGTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-cCC-----CcCC---HHHHhcCCCEEEEcCC
Confidence            589999999999999999999999999999887654332211 121     1222   2245678999998764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.71  E-value=1.8e-05  Score=63.25  Aligned_cols=71  Identities=21%  Similarity=0.255  Sum_probs=49.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceE-EEEccCCC-HHHHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE-LVYGDVTD-YRSLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~-~~~~~~~~~--~~d~vi~~a~   74 (209)
                      +|+|+||+|.||...++.+...|.+|+++++++++.+.+.+. +.. .+..+ .+ .+.+.++..  ++|++|+|+|
T Consensus       162 ~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g  236 (342)
T 4eye_A          162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV-GADIVLPLE-EGWAKAVREATGGAGVDMVVDPIG  236 (342)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCcEEecCc-hhHHHHHHHHhCCCCceEEEECCc
Confidence            699999999999999999999999999999977654322211 222 22233 22 223444433  5999999998

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.71  E-value=1.7e-05  Score=62.26  Aligned_cols=70  Identities=20%  Similarity=0.185  Sum_probs=50.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|+|++|.+|...++.+...|.+|+++++++.+.+.... .+...+ .|..+.+++.+.+.++|++|+ +|
T Consensus       128 ~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g  197 (302)
T 1iz0_A          128 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEA-ATYAEVPERAKAWGGLDLVLE-VR  197 (302)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEE-EEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCCEE-EECCcchhHHHHhcCceEEEE-CC
Confidence            69999999999999999999999999999997765443221 133222 355441334444478999999 87

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.69  E-value=5.4e-05  Score=60.38  Aligned_cols=71  Identities=13%  Similarity=0.152  Sum_probs=49.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~d~vi~~a~   74 (209)
                      +|+|+||+|.||...++.+...|.+|+++++++++.+.+.+. +...+ .|..+.   +.+.+...  ++|+||+|+|
T Consensus       147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-ga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  222 (340)
T 3gms_A          147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL-GAAYV-IDTSTAPLYETVMELTNGIGADAAIDSIG  222 (340)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-TCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC-CCcEE-EeCCcccHHHHHHHHhCCCCCcEEEECCC
Confidence            699999999999999999888999999999987765432221 22221 244432   23333332  6999999998

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.67  E-value=8.2e-05  Score=59.51  Aligned_cols=71  Identities=13%  Similarity=0.091  Sum_probs=49.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~--~~~d~vi~~a~   74 (209)
                      +++|+||+|.||...++.+...|.+|+++++++.+.+.+.+. +...+ .|..+.   +.+.++.  .++|++++++|
T Consensus       167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~-Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~vid~~g  242 (349)
T 3pi7_A          167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI-GAAHV-LNEKAPDFEATLREVMKAEQPRIFLDAVT  242 (349)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH-TCSEE-EETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCCEE-EECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence            589999999999999999988999999999877654332211 22221 234332   2233333  37999999998

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.67  E-value=3e-05  Score=61.13  Aligned_cols=105  Identities=15%  Similarity=0.210  Sum_probs=72.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC---------CCceEEEE-ccCCCHHHHHHHhcCcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS---------EGALELVY-GDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~---------~~~~~~~~-~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      ||.|+|+ |.+|..++..|+..|. +|.+++++.++++....         .....+.. .|   .    ++++++|+||
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a~~~aD~Vi   72 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---Y----EDMRGSDIVL   72 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---G----GGGTTCSEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---H----HHhCCCCEEE
Confidence            6899998 9999999999988787 69999987654321000         00122222 22   2    3578999999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..++..........+....|+.-...+++.+.+......+|.+|
T Consensus        73 ~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           73 VTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             ECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99997544334455668889999999999998764334666665

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.67  E-value=2e-05  Score=62.16  Aligned_cols=73  Identities=11%  Similarity=0.201  Sum_probs=51.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcC---CCCCCCCCCC----CceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR---TSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      +++|+|+ |++|++++..|.+.|. +|+++.|+   .++++.+.+.    .++.....++.+.+.+.+.+.++|+|||+-
T Consensus       150 ~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaT  228 (312)
T 3t4e_A          150 TMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGT  228 (312)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECS
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECC
Confidence            6999996 9999999999999997 89999998   3333222110    123344446666544556677899999987


Q ss_pred             cc
Q 028444           74 AL   75 (209)
Q Consensus        74 ~~   75 (209)
                      +.
T Consensus       229 p~  230 (312)
T 3t4e_A          229 KV  230 (312)
T ss_dssp             ST
T ss_pred             cC
Confidence            64

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.67  E-value=7.6e-06  Score=65.73  Aligned_cols=71  Identities=13%  Similarity=0.102  Sum_probs=49.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.||..+++.+...|.+|+++++++.+.+.+.+. +...+ .|..+.+   .+.++. .++|++|+|+|
T Consensus       170 ~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~~-~~~~~~~~~~~~~~~~~~g~Dvvid~~g  244 (353)
T 4dup_A          170 SVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL-GAKRG-INYRSEDFAAVIKAETGQGVDIILDMIG  244 (353)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSEE-EETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCCEE-EeCCchHHHHHHHHHhCCCceEEEECCC
Confidence            699999999999999999999999999999876544322111 22211 2444432   233322 36999999998

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.66  E-value=0.00014  Score=55.55  Aligned_cols=96  Identities=17%  Similarity=0.144  Sum_probs=61.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCC--------------------------CCCCceEEEEccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL--------------------------PSEGALELVYGDV   53 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------------~~~~~~~~~~~Dl   53 (209)
                      ++|+|.| .|++|+++++.|+..|. ++++++++.-....+                          .....++.+..++
T Consensus        32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            3799999 58999999999999996 888888865111000                          0011344555556


Q ss_pred             CCHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        54 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                      + .+.+.+.+.++|+||.+...               ...-..+.+.+++.+  ..+|+.+.
T Consensus       111 ~-~~~~~~~~~~~DvVi~~~d~---------------~~~~~~l~~~~~~~~--~p~i~~~~  154 (249)
T 1jw9_B          111 D-DAELAALIAEHDLVLDCTDN---------------VAVRNQLNAGCFAAK--VPLVSGAA  154 (249)
T ss_dssp             C-HHHHHHHHHTSSEEEECCSS---------------HHHHHHHHHHHHHHT--CCEEEEEE
T ss_pred             C-HhHHHHHHhCCCEEEEeCCC---------------HHHHHHHHHHHHHcC--CCEEEeee
Confidence            5 45566778899999988531               123345566666653  34555543

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.66  E-value=3.1e-06  Score=66.11  Aligned_cols=71  Identities=15%  Similarity=0.076  Sum_probs=47.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCce-----EEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-----ELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|++ ++|+++++.|++.| +|++.+|+.++.+.+....+.     ..+.+|+.+.   .+.+.++|+||||++.
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilVn~ag~  203 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIIINATPI  203 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEEECSCT
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEEECCCC
Confidence            369999985 99999999999999 999999876543322110000     0012233331   3345689999999996


Q ss_pred             C
Q 028444           76 V   76 (209)
Q Consensus        76 ~   76 (209)
                      .
T Consensus       204 ~  204 (287)
T 1nvt_A          204 G  204 (287)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.62  E-value=3.7e-05  Score=62.01  Aligned_cols=72  Identities=17%  Similarity=0.063  Sum_probs=53.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.||...++.+...|.+|+++++++++.+......+... ..|..+.+.+.++..++|+||+++|.
T Consensus       190 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          190 HIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCc
Confidence            6899995 999999999999999999999987765432221113332 23667777777776789999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.61  E-value=1.1e-05  Score=65.47  Aligned_cols=73  Identities=16%  Similarity=0.134  Sum_probs=52.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |.||+.+++.+...|.+|++++|+..+++.+.+..+.. +..+..+.+.+.+++.++|+||++++.
T Consensus       169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~-~~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR-IHTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-SEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe-eEeccCCHHHHHHHHcCCCEEEECCCc
Confidence            37999997 99999999999999999999998765432211100111 112344566777888899999999874

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.61  E-value=0.00027  Score=55.29  Aligned_cols=52  Identities=23%  Similarity=0.311  Sum_probs=41.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +|.|+||.|.+|..+++.|.+.|++|++++|++..                     +..+++.++|+||-+..
T Consensus        23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~---------------------~~~~~~~~aDvVilavp   74 (298)
T 2pv7_A           23 KIVIVGGYGKLGGLFARYLRASGYPISILDREDWA---------------------VAESILANADVVIVSVP   74 (298)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG---------------------GHHHHHTTCSEEEECSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc---------------------CHHHHhcCCCEEEEeCC
Confidence            79999999999999999999999999999876431                     23345667777776654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.60  E-value=1.6e-05  Score=61.86  Aligned_cols=70  Identities=20%  Similarity=0.267  Sum_probs=49.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC-----CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |++|++++..|.+.|. +|+++.|+.++.+.+.+.     ..+.+...++.   ++.+.+.++|+|||+...
T Consensus       129 ~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          129 SVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVIAAADGVVNATPM  204 (283)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHHHHSSEEEECSST
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHhcCCEEEECCCC
Confidence            6999997 8999999999999998 799999987654432211     12233333433   345567789999998764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.58  E-value=3.5e-05  Score=62.06  Aligned_cols=71  Identities=18%  Similarity=0.119  Sum_probs=48.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.||..+++.+...|++|+++++++++.+.+... +...+ .|..+.   +.+.+.. .++|+||+++|
T Consensus       166 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g  240 (362)
T 2c0c_A          166 KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL-GCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVG  240 (362)
T ss_dssp             EEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc-CCcEE-EecCChhHHHHHHHhcCCCCCEEEECCC
Confidence            699999999999999999999999999999875543322111 22222 233332   2222222 36899999988

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.56  E-value=5.4e-05  Score=59.41  Aligned_cols=72  Identities=21%  Similarity=0.273  Sum_probs=47.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEE--------ccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY--------GDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--------~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|++++.+.+.+. +.....        .+.++.+++..+++++|+||-+
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~   81 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL   81 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence            68999995 9999999999999999999999876543322211 222211        1222333333334578988877


Q ss_pred             Cc
Q 028444           73 AA   74 (209)
Q Consensus        73 a~   74 (209)
                      ..
T Consensus        82 v~   83 (316)
T 2ew2_A           82 TK   83 (316)
T ss_dssp             SC
T ss_pred             ec
Confidence            54

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.55  E-value=0.00042  Score=54.64  Aligned_cols=97  Identities=18%  Similarity=0.172  Sum_probs=64.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCC--CC--CCC----CceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS--GL--PSE----GALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~--~~--~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|..++..|+..|+  +|++++|+.++.+  ..  ...    ........  ++.    ..++++|+||
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~Vi   80 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMVV   80 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCEEE
Confidence            79999997 9999999999999998  9999998753321  00  000    01222211  122    2467899999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET  104 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  104 (209)
                      -+++.......+..+.+..|+.....+++.+.+.
T Consensus        81 i~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~  114 (319)
T 1lld_A           81 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV  114 (319)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9997543222334456677777777788777765

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.55  E-value=5.7e-05  Score=57.85  Aligned_cols=66  Identities=20%  Similarity=0.295  Sum_probs=50.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |+.|++++..|.+.|. +|++..|+.++.+.+...  +...     ..+++.+.+.++|+||++...
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~--~~~~-----~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP--VKIF-----SLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS--CEEE-----EGGGHHHHHHTCSEEEECSST
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH--cccC-----CHHHHHhhhcCCCEEEECCCC
Confidence            5789985 9999999999999998 899999987776665542  2222     123455677889999998653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.55  E-value=4.7e-05  Score=60.54  Aligned_cols=72  Identities=17%  Similarity=0.167  Sum_probs=49.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHh--cCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC--FGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~--~~~d~vi~~a~~   75 (209)
                      +++|+||+|.||...++.+...|.+|+++++++.+.+..... +...+ .|..+.   +.+.+..  .++|+|++|+|.
T Consensus       151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~~-~~~~~~~~~~~~~~~~~~~g~D~vid~~g~  227 (334)
T 3qwb_A          151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY-GAEYL-INASKEDILRQVLKFTNGKGVDASFDSVGK  227 (334)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEE-EETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcEE-EeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence            699999999999999999999999999999976543322111 22221 244332   3344443  259999999983

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.54  E-value=7.6e-06  Score=69.21  Aligned_cols=68  Identities=21%  Similarity=0.168  Sum_probs=43.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHH-HhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-ACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vi~~a~~   75 (209)
                      +++|||| |++|++++..|++.|++|+++.|+.++++.+....+...+  ++.|.   .+ ....+|+||||++.
T Consensus       366 ~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~--~~~dl---~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          366 TVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL--SLTDL---DNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE--ETTTT---TTC--CCSEEEEECSST
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee--eHHHh---hhccccCceEEEECCCC
Confidence            5899998 7999999999999999999999986543322111011111  12221   11 12358999999986

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.54  E-value=7e-06  Score=63.63  Aligned_cols=66  Identities=17%  Similarity=0.198  Sum_probs=46.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC----CceEEEEccCCCHHHHHHHh-cCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDAC-FGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |++|++++..|++.|.+|++..|+.++.+.+...    ..+.  ..|+   ++   +. .++|+||++++.
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~---~~---~~~~~~DivIn~t~~  190 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSM---DS---IPLQTYDLVINATSA  190 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEG---GG---CCCSCCSEEEECCCC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeH---HH---hccCCCCEEEECCCC
Confidence            47999997 8899999999999999999999986554332211    0121  1232   11   11 379999999985

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.53  E-value=2.5e-05  Score=62.47  Aligned_cols=72  Identities=14%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHh--cCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~~d~vi~~a~~   75 (209)
                      +++|+|++|.||..+++.+... |++|+++++++.+.+.+.+. +... ..|..+.+   .+.++.  .++|+||+++|.
T Consensus       173 ~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          173 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GADY-VINASMQDPLAEIRRITESKGVDAVIDLNNS  250 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESCCC
T ss_pred             EEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCCE-EecCCCccHHHHHHHHhcCCCceEEEECCCC
Confidence            6999999999999999999988 99999999876543322111 2221 12454433   345544  369999999983

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.52  E-value=0.00015  Score=56.68  Aligned_cols=64  Identities=19%  Similarity=0.237  Sum_probs=46.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|..+++.|.+.|++|++.+|++++.+.+.+. ++..    ..   +..++++ +|+||-+..
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~----~~---~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-GATL----AD---SVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-TCEE----CS---SHHHHTT-SSEEEECCS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCEE----cC---CHHHHHh-CCEEEEECC
Confidence            4799998 79999999999999999999999988765543321 2221    12   2345566 888887754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.51  E-value=5.1e-05  Score=60.52  Aligned_cols=70  Identities=19%  Similarity=0.110  Sum_probs=48.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|+|+ |.||..+++.+...|++|++++|++.+.+.+.. .+...+ .|.++.   +.+.++..++|+||+++|
T Consensus       167 ~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          167 WVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEE-ecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            7999999 779999999999999999999987654332211 133222 355543   233333367999999988

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.51  E-value=0.00042  Score=54.47  Aligned_cols=25  Identities=32%  Similarity=0.356  Sum_probs=23.0

Q ss_pred             ChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444           10 GYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus        10 G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |-.|.++|++++++|++|+++.+..
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCC
Confidence            7799999999999999999999854

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.50  E-value=0.00055  Score=50.69  Aligned_cols=34  Identities=26%  Similarity=0.440  Sum_probs=31.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      |+|.|+| .|.+|+++++.|.+.|++|++.+|+++
T Consensus        20 ~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~   53 (209)
T 2raf_A           20 MEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            6899999 799999999999999999999988754

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.49  E-value=0.00016  Score=59.83  Aligned_cols=87  Identities=7%  Similarity=0.161  Sum_probs=58.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-C---eEEEEEcCCCCCCCCCCCCceEEEEccC--CCHHH-HHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-H---SVRALVRRTSDISGLPSEGALELVYGDV--TDYRS-LVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~Dl--~~~~~-~~~~~~~~d~vi~~a   73 (209)
                      |+|+|+| .|.||+.+++.|++++ +   +|++.+......+ +.+..++.+...++  .|.++ +..++++.|+|||++
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~-~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s   91 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-VAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS   91 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC-HHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh-HHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence            5799999 8999999999998864 4   6888876544321 11112445665555  44444 455777779999865


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcC
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK  105 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  105 (209)
                      -+.                ....++++|.+.+
T Consensus        92 ~~~----------------~~l~Im~acleaG  107 (480)
T 2ph5_A           92 IGI----------------SSLALIILCNQKG  107 (480)
T ss_dssp             SSS----------------CHHHHHHHHHHHT
T ss_pred             ccc----------------cCHHHHHHHHHcC
Confidence            421                1566888888874

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.49  E-value=0.0012  Score=53.13  Aligned_cols=67  Identities=12%  Similarity=0.080  Sum_probs=40.1

Q ss_pred             CEEEEEcCCChhHHHHHH-HHHhCCC---eEEEEEcCCC-C-CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCH-ALLKQGH---SVRALVRRTS-D-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~-~l~~~g~---~V~~~~r~~~-~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.||||++|+.+.+ .|.++.+   ++..++.+.. + ...+.   +.+...-|+.+.+.    ++++|+|+-|.+
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~---~~~~~~~~~~~~~~----~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFG---KDAGMLHDAFDIES----LKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSS---SCCCBCEETTCHHH----HTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhC---CCceEEEecCChhH----hccCCEEEECCC
Confidence            899999999999999999 6666653   5555543221 1 11121   11111123334332    478899998876

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.48  E-value=3.9e-05  Score=60.82  Aligned_cols=71  Identities=15%  Similarity=0.177  Sum_probs=49.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~d~vi~~a~   74 (209)
                      +++|+||+|.||...++.+...|.+|+++++++.+.+.+.+. +... ..|..+.   +.+.+...  ++|+||+++|
T Consensus       143 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  218 (325)
T 3jyn_A          143 IILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL-GAWE-TIDYSHEDVAKRVLELTDGKKCPVVYDGVG  218 (325)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCCE-EEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence            699999999999999999988999999999876544322211 2221 1244433   33344333  6999999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.47  E-value=0.0001  Score=61.05  Aligned_cols=36  Identities=28%  Similarity=0.273  Sum_probs=32.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +|+|+||+|.||...++.+...|.+|+++++++++.
T Consensus       223 ~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~  258 (447)
T 4a0s_A          223 IVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE  258 (447)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            699999999999999999999999999998876543

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.46  E-value=2.3e-05  Score=64.78  Aligned_cols=36  Identities=31%  Similarity=0.506  Sum_probs=32.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      |+|.|+| +|.+|..++..|++.|++|++++|++++.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~   36 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKI   36 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            8999998 79999999999999999999999876543

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.45  E-value=0.0013  Score=53.04  Aligned_cols=69  Identities=14%  Similarity=0.129  Sum_probs=40.5

Q ss_pred             CEEEEEcCCChhHHHHHHH-HHhCCC---eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHA-LLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~-l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |||.|.||+|.+|+.++++ |.++++   .++.+..++.. +......+......|..+++.    ++++|+||-|.+
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G-~~v~~~~g~~i~~~~~~~~~~----~~~~DvVf~a~g   74 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG-QAAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQG   74 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT-SBCCGGGTCCCBCEETTCHHH----HHTCSEEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC-CCccccCCCceEEEecCChHH----hcCCCEEEECCC
Confidence            4899999999999999995 444543   44555443211 111100012222234445444    358999998887

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.42  E-value=0.00025  Score=56.77  Aligned_cols=93  Identities=13%  Similarity=0.055  Sum_probs=55.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC-CceEE-EEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE-GALEL-VYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~-~~~~~-~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      ||.|.||+|.||+.+++.|.+++ .+++.+.+.......+... ..+.- ....+.+.+   . +.++|+|+.|++..  
T Consensus         6 kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~~--   79 (345)
T 2ozp_A            6 TLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPHG--   79 (345)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCTT--
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCcH--
Confidence            79999999999999999998776 4777776543221111110 00000 011122332   2 47899999998731  


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                                    ....+++.+.+.+  .++|.+|+.
T Consensus        80 --------------~s~~~a~~~~~aG--~~VId~Sa~  101 (345)
T 2ozp_A           80 --------------VFAREFDRYSALA--PVLVDLSAD  101 (345)
T ss_dssp             --------------HHHHTHHHHHTTC--SEEEECSST
T ss_pred             --------------HHHHHHHHHHHCC--CEEEEcCcc
Confidence                          1334455555553  468888874

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.41  E-value=0.00037  Score=53.85  Aligned_cols=71  Identities=21%  Similarity=0.207  Sum_probs=42.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEE-EcCCCCCC--CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~-~r~~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |||.|+|++|.+|+.+++.+.+. ++++++. +|+..+..  ......+...   ++.-.+++.+++.++|+||.++.
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~---gv~v~~dl~~ll~~~DVVIDfT~   82 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQT---GVALTDDIERVCAEADYLIDFTL   82 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCC---SCBCBCCHHHHHHHCSEEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCC---CceecCCHHHHhcCCCEEEEcCC
Confidence            48999999999999999998865 5777774 55432210  0100001100   12112234445567899988865

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.40  E-value=4.3e-05  Score=59.47  Aligned_cols=65  Identities=25%  Similarity=0.304  Sum_probs=44.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|++++.+.+.+. ++..       ..+..++++++|+||-+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~-------~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-GAER-------AATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCee-------cCCHHHHHhcCCEEEEEcC
Confidence            7899998 69999999999999999999999987655433221 2211       1122344455676665543

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.39  E-value=0.00069  Score=54.06  Aligned_cols=31  Identities=26%  Similarity=0.424  Sum_probs=25.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC---eEEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALV   31 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~   31 (209)
                      |||.|.||+|.||+.+++.|.++++   +++.+.
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            4799999999999999999986653   555554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.38  E-value=4.8e-05  Score=58.96  Aligned_cols=67  Identities=25%  Similarity=0.243  Sum_probs=48.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+++|+| +|.+|+++++.|.+.|++|++.+|+.++.+.+....++..  .+  +   +.++++++|+||++...
T Consensus       130 ~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~--~---~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          130 KSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN--S---PEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS--C---GGGTGGGCSEEEECSST
T ss_pred             CEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh--h---HHhhhcCCCEEEEeCCC
Confidence            5799999 5899999999999999999999988655443333223322  11  2   23456789999999874

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.37  E-value=0.0014  Score=49.84  Aligned_cols=72  Identities=25%  Similarity=0.300  Sum_probs=47.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-----cCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-----FGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~d~vi~~a~   74 (209)
                      |||.|+|++|.+|+.+++.+.+. ++++++.....++++.+.. .+.. +..|.+.++.....+     .+.++|+-..|
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-TTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-cCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence            89999999999999999998865 8999877654333222111 1233 445777776655433     25677774444

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.36  E-value=0.0013  Score=51.59  Aligned_cols=104  Identities=19%  Similarity=0.146  Sum_probs=66.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |||.|+|| |.+|..++..|+..|.  +|.+++.+.+......     ...++.. ..|   .    +.++++|+||.++
T Consensus        15 ~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d---~----~~l~~aD~Vi~aa   85 (303)
T 2i6t_A           15 NKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKD---L----SASAHSKVVIFTV   85 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESC---G----GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCC---H----HHHCCCCEEEEcC
Confidence            48999995 9999999999999998  9999998764111100     0013333 123   2    3578999999999


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      +...+ .....+.+..|+.-...+++.+.+......+|.+|
T Consensus        86 g~~~p-G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           86 NSLGS-SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             CC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            87322 22334567788888888888888764333455555

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.32  E-value=8.3e-05  Score=59.62  Aligned_cols=32  Identities=41%  Similarity=0.651  Sum_probs=27.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-----C-eEEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-----H-SVRALVR   32 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-----~-~V~~~~r   32 (209)
                      |||.|.||||.+|+.+++.|.+++     + +++.+.+
T Consensus        10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s   47 (352)
T 2nqt_A           10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA   47 (352)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEEC
Confidence            389999999999999999999887     3 6777654

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.00089  Score=53.37  Aligned_cols=60  Identities=28%  Similarity=0.166  Sum_probs=45.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |++.|+| .|-||++++++|...|++|++.+|+..+..      +...       ..++.++++++|+|+.+..
T Consensus       172 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~-------~~sl~ell~~aDvVil~vP  231 (340)
T 4dgs_A          172 KRIGVLG-LGQIGRALASRAEAFGMSVRYWNRSTLSGV------DWIA-------HQSPVDLARDSDVLAVCVA  231 (340)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCTTS------CCEE-------CSSHHHHHHTCSEEEECC-
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCccccc------Ccee-------cCCHHHHHhcCCEEEEeCC
Confidence            5789999 699999999999999999999988765421      1111       1245677889999987765

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.30  E-value=0.00018  Score=55.46  Aligned_cols=64  Identities=20%  Similarity=0.180  Sum_probs=46.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |+.|++++..|.+.|.+|++..|+.++.+.+. ..++...  ++.+.       .++|+|||+.+.
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~~--~~~~l-------~~~DiVInaTp~  182 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDCF--MEPPK-------SAFDLIINATSA  182 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEEE--SSCCS-------SCCSEEEECCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEe--cHHHh-------ccCCEEEEcccC
Confidence            37899995 99999999999999999999999987755443 2123322  22221       278999998664

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.29  E-value=0.0025  Score=51.44  Aligned_cols=67  Identities=16%  Similarity=0.192  Sum_probs=39.6

Q ss_pred             CEEEEEcCCChhHHHHHH-HHHhCCC---eEEEEEcCCC-C-CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCH-ALLKQGH---SVRALVRRTS-D-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~-~l~~~g~---~V~~~~r~~~-~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|.||||++|+.+++ .|.++.+   ++..++.+.. + ...+..   .....-|+.+.+.    +.++|+|+-|.+
T Consensus         5 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~---~~~~v~~~~~~~~----~~~vDvvf~a~~   77 (377)
T 3uw3_A            5 MNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAK---NETTLKDATSIDD----LKKCDVIITCQG   77 (377)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCC---SCCBCEETTCHHH----HHTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCC---CceEEEeCCChhH----hcCCCEEEECCC
Confidence            689999999999999999 5556553   5555543221 1 111211   1111123434333    367888888876

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.27  E-value=5.5e-05  Score=60.42  Aligned_cols=70  Identities=19%  Similarity=0.241  Sum_probs=47.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC-HHHHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~vi~~a~   74 (209)
                      +|+|+||+|.||...++.+...|.+|+++ +++++.+.+.+ .+...+. +-.+ .+.+.+...  ++|++++++|
T Consensus       153 ~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~-lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          153 TVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD-LGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH-HTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH-cCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence            69999999999999999999999999998 65444332211 1344432 2222 222333332  6999999988

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.27  E-value=8.7e-05  Score=59.36  Aligned_cols=70  Identities=17%  Similarity=0.115  Sum_probs=47.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~d~vi~~a~   74 (209)
                      +|+|+|+ |.||...++.+...|+ +|+++++++++.+.+.. .++..+ .|..+.   +.+.++..  ++|+||+++|
T Consensus       170 ~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~~g  245 (348)
T 2d8a_A          170 SVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK-VGADYV-INPFEEDVVKEVMDITDGNGVDVFLEFSG  245 (348)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH-HTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence            6899999 9999999999989999 99999987654332211 122222 244432   23333332  6999999988

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.26  E-value=0.00036  Score=56.35  Aligned_cols=70  Identities=16%  Similarity=0.063  Sum_probs=46.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi~~a~   74 (209)
                      +++|+||+|.||...++.+...|.+|+++++ +++.+.+.. .+...+ .|..+.+...++.  .++|++|+++|
T Consensus       186 ~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~-lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~g  257 (375)
T 2vn8_A          186 RVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRK-LGADDV-IDYKSGSVEEQLKSLKPFDFILDNVG  257 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHH-TTCSEE-EETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHH-cCCCEE-EECCchHHHHHHhhcCCCCEEEECCC
Confidence            6999999999999999999899999998874 333222111 133222 2444433222222  47999999998

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.25  E-value=0.0012  Score=56.29  Aligned_cols=68  Identities=24%  Similarity=0.208  Sum_probs=57.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~   74 (209)
                      ++++|.|+ |-+|+.+++.|.+.|++|+++++++++.++..     ..+.+|.+|++.++++- +++|.+|-+.+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-----~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-----VVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-----CEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-----CEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            46889996 99999999999999999999999988765542     78999999999887753 57998886654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.25  E-value=0.00019  Score=57.63  Aligned_cols=72  Identities=11%  Similarity=0.031  Sum_probs=51.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |.||...++.+...|.+|+++++++++.+.+....+...+ .|..+.+.+.++..++|+||+++|.
T Consensus       183 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          183 RGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCC
Confidence            6899995 9999999998888899999999887654322211133222 2555666666666689999999983

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.25  E-value=0.00015  Score=55.71  Aligned_cols=66  Identities=21%  Similarity=0.268  Sum_probs=44.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+|+ |.+|+.+++.|.+.|++ |.+.+|++++.+.+....++.. ..   +.   .++++++|+||-+..
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~~---~~---~~~~~~~Dvvi~av~   77 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEY-TT---DL---AEVNPYAKLYIVSLK   77 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEE-ES---CG---GGSCSCCSEEEECCC
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCce-eC---CH---HHHhcCCCEEEEecC
Confidence            68999995 99999999999999998 7888887654332211112222 11   22   234578899997754

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.24  E-value=5e-05  Score=61.21  Aligned_cols=69  Identities=22%  Similarity=0.271  Sum_probs=48.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC---CCCCCCCCCCceEEEEccCCC--HHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---SDISGLPSEGALELVYGDVTD--YRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.||..+++.+...|.+|+++++++   ++.+.+.. .++..+  | .+  .+.+.+.-.++|+||+++|.
T Consensus       183 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~-~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~  256 (366)
T 2cdc_A          183 KVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE-TKTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA  256 (366)
T ss_dssp             EEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH-HTCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH-hCCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence            6999999 9999999999988999999999886   44322111 144444  5 44  22333322579999999983

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.23  E-value=0.00018  Score=56.93  Aligned_cols=71  Identities=20%  Similarity=0.167  Sum_probs=46.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH--HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY--RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|+||+|.+|...++.+...|++|+++++++++.+.+.+. +...+ .|..+.  +.+..+. .++|+||+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l-Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g  225 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL-GAKEV-LAREDVMAERIRPLDKQRWAAAVDPVG  225 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT-TCSEE-EECC---------CCSCCEEEEEECST
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCcEE-EecCCcHHHHHHHhcCCcccEEEECCc
Confidence            689999999999999999989999999999987654432221 33222 244433  1222222 25899999988

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.23  E-value=0.00085  Score=53.63  Aligned_cols=70  Identities=19%  Similarity=0.092  Sum_probs=47.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC----HHHHHHHh-----cCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD----YRSLVDAC-----FGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~-----~~~d~vi~~   72 (209)
                      +|+|+|+ |.+|...++.+...|.+|+++++++.+.+.+.+. +... ..|..+    .+.+.+..     .++|+||++
T Consensus       171 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~  247 (352)
T 1e3j_A          171 TVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC-GADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTIDC  247 (352)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-TCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh-CCCE-EEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence            6999996 9999999998888999999988876543322111 2321 123332    34555544     369999999


Q ss_pred             Cc
Q 028444           73 AA   74 (209)
Q Consensus        73 a~   74 (209)
                      +|
T Consensus       248 ~g  249 (352)
T 1e3j_A          248 SG  249 (352)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.23  E-value=8.8e-05  Score=58.46  Aligned_cols=38  Identities=29%  Similarity=0.396  Sum_probs=33.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (209)
                      |+|.|+| .|.+|..+++.|++.|++|++.+|++++.+.
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~   59 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDE   59 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            6899998 7999999999999999999999998765543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.22  E-value=8.5e-05  Score=58.83  Aligned_cols=65  Identities=15%  Similarity=0.220  Sum_probs=46.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|++++.+.+.+. ++..       ..+..++++++|+||-+..
T Consensus        32 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~-------~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           32 RKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-GATI-------HEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             SEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCEe-------eCCHHHHHhcCCEEEEECC
Confidence            5899997 69999999999999999999999987654433222 2222       1123455677787776653

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.22  E-value=0.00011  Score=58.69  Aligned_cols=71  Identities=14%  Similarity=0.115  Sum_probs=47.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC--HHHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~-~~~d~vi~~a~   74 (209)
                      +|+|+||+|.||...++.+...|.+|+++++++.+.+.+.+. +...+ .|..+  .+.+.++- .++|+|++++|
T Consensus       153 ~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          153 TLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM-GADIV-LNHKESLLNQFKTQGIELVDYVFCTFN  226 (346)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH-TCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCcEE-EECCccHHHHHHHhCCCCccEEEECCC
Confidence            699999999999999999999999999999876543322111 22222 13322  23333331 25899999987

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=97.21  E-value=0.00017  Score=60.10  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=32.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CC-eEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~-~V~~~~r~~~   35 (209)
                      |||.|+| .|.+|..++..|++. |+ +|++++++++
T Consensus        19 mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           19 KKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            6899998 699999999999999 99 9999999887

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.21  E-value=0.00026  Score=56.90  Aligned_cols=68  Identities=18%  Similarity=0.278  Sum_probs=45.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|++++.+.+... ++.    ...+.+++.+-.+.+|+||-+..
T Consensus        23 mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~----~~~s~~e~~~~a~~~DvVi~~vp   90 (358)
T 4e21_A           23 MQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE-GIA----GARSIEEFCAKLVKPRVVWLMVP   90 (358)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCB----CCSSHHHHHHHSCSSCEEEECSC
T ss_pred             CEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCE----EeCCHHHHHhcCCCCCEEEEeCC
Confidence            5899998 79999999999999999999999986644333221 211    12344433333334488877654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.21  E-value=0.00035  Score=56.74  Aligned_cols=71  Identities=18%  Similarity=0.152  Sum_probs=49.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC----------------------CHHHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT----------------------DYRSL   59 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~----------------------~~~~~   59 (209)
                      +++|+| .|.+|..+++.+...|.+|++.+|++.+.+.... .+..++..|..                      +.+.+
T Consensus       174 ~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l  251 (384)
T 1l7d_A          174 RVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV  251 (384)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhHHHH
Confidence            799999 4999999999999999999999988765432211 13333211221                      12336


Q ss_pred             HHHhcCcCEEEEcCc
Q 028444           60 VDACFGCHVIFHTAA   74 (209)
Q Consensus        60 ~~~~~~~d~vi~~a~   74 (209)
                      .+.+.++|+||+++.
T Consensus       252 ~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          252 LKELVKTDIAITTAL  266 (384)
T ss_dssp             HHHHTTCSEEEECCC
T ss_pred             HHHhCCCCEEEECCc
Confidence            777889999999883

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.20  E-value=0.00011  Score=61.48  Aligned_cols=36  Identities=31%  Similarity=0.366  Sum_probs=32.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      |+|.|+| .|.+|..++..|++.|++|++++|++++.
T Consensus         9 ~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v   44 (478)
T 2y0c_A            9 MNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKI   44 (478)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            8999998 79999999999999999999999976543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.19  E-value=0.0001  Score=58.94  Aligned_cols=73  Identities=21%  Similarity=0.102  Sum_probs=46.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEc------cCC-CHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYG------DVT-DYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------Dl~-~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|++++.+.+....+..+...      .+. ...+..+++.++|+||-+.
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   83 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   83 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence            58999995 999999999999999999999987554332211111111100      010 1122345567899999887


Q ss_pred             c
Q 028444           74 A   74 (209)
Q Consensus        74 ~   74 (209)
                      .
T Consensus        84 ~   84 (359)
T 1bg6_A           84 P   84 (359)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.18  E-value=0.0002  Score=56.10  Aligned_cols=67  Identities=15%  Similarity=0.199  Sum_probs=48.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ++++|+|+ |.||+++++.|...|++|++.+|+.++...+.. .++..+.     .+++.++++++|+|+.+..
T Consensus       158 ~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~~-----~~~l~~~l~~aDvVi~~~p  224 (300)
T 2rir_A          158 SQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLVPFH-----TDELKEHVKDIDICINTIP  224 (300)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCEEEE-----GGGHHHHSTTCSEEEECCS
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCeEEc-----hhhHHHHhhCCCEEEECCC
Confidence            47999994 999999999999999999999987643221111 1333221     2356677889999999876

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.17  E-value=0.00013  Score=58.82  Aligned_cols=72  Identities=18%  Similarity=0.153  Sum_probs=52.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccC------------------CCHHHHHHHh
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV------------------TDYRSLVDAC   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl------------------~~~~~~~~~~   63 (209)
                      +|+|+|+ |-+|...++.+...|.+|++++|++.+++.+.. .+.+++..|+                  .+.+.+.+++
T Consensus       186 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l  263 (381)
T 3p2y_A          186 SALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI  263 (381)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence            7999996 999999999999999999999998765433222 1444443221                  1234677788


Q ss_pred             cCcCEEEEcCcc
Q 028444           64 FGCHVIFHTAAL   75 (209)
Q Consensus        64 ~~~d~vi~~a~~   75 (209)
                      +++|+||.++..
T Consensus       264 ~~aDIVI~tv~i  275 (381)
T 3p2y_A          264 TKFDIVITTALV  275 (381)
T ss_dssp             TTCSEEEECCCC
T ss_pred             hcCCEEEECCCC
Confidence            999999988754

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=97.17  E-value=0.00095  Score=52.68  Aligned_cols=63  Identities=17%  Similarity=0.258  Sum_probs=48.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |++.|.| .|.||++++++|...|++|++.+|+....+      ++....    ..+++.++++++|+|+.+..
T Consensus       140 ~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~----~~~~l~ell~~aDiV~l~~P  202 (315)
T 3pp8_A          140 FSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWP------GVESYV----GREELRAFLNQTRVLINLLP  202 (315)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCT------TCEEEE----SHHHHHHHHHTCSEEEECCC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhh------hhhhhc----ccCCHHHHHhhCCEEEEecC
Confidence            5788998 699999999999999999999998765432      222221    23677888999999987765

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.17  E-value=0.00044  Score=56.29  Aligned_cols=73  Identities=19%  Similarity=0.183  Sum_probs=52.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEcc----------------CCCH------HHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGD----------------VTDY------RSL   59 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D----------------l~~~------~~~   59 (209)
                      +|+|+|+ |-+|...++.+...|.+|++.+++..+++.+.. .+..++..+                +++.      +.+
T Consensus       192 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l  269 (405)
T 4dio_A          192 KIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV  269 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence            7999996 999999999999999999999998765332221 133333322                2332      467


Q ss_pred             HHHhcCcCEEEEcCccC
Q 028444           60 VDACFGCHVIFHTAALV   76 (209)
Q Consensus        60 ~~~~~~~d~vi~~a~~~   76 (209)
                      .++++++|+||.++...
T Consensus       270 ~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          270 AEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHTCSEEEECCCCS
T ss_pred             HHHhcCCCEEEECCcCC
Confidence            88889999999987643

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.17  E-value=7.1e-05  Score=56.02  Aligned_cols=66  Identities=11%  Similarity=0.166  Sum_probs=45.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEE-EEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| +|.+|.++++.|.+.|++|++ .+|++++.+.+....+.....   .+.    +.++++|+||-+..
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~~aDvVilavp   90 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VEL----KDALQADVVILAVP   90 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHTTSSEEEEESC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHhcCCEEEEeCC
Confidence            5899999 899999999999999999999 777766544322111111111   122    23578899987753

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.17  E-value=0.0015  Score=52.81  Aligned_cols=66  Identities=24%  Similarity=0.241  Sum_probs=52.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      ++|+|.| +|.+|+.+++.+.+.|++|++++.++.... ..    --..+..|..|.+.+.++++++|+|..
T Consensus        13 ~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~----ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           13 ATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV----AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG----SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh----CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            3799999 588999999999999999999987654211 11    124667899999999999988998754

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.15  E-value=0.0001  Score=57.98  Aligned_cols=65  Identities=23%  Similarity=0.283  Sum_probs=44.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|++++.+.+... ++..    ..   +..++++++|+||-+..
T Consensus        10 ~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~----~~---~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A           10 FDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-GAHL----CE---SVKAALSASPATIFVLL   74 (306)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-TCEE----CS---SHHHHHHHSSEEEECCS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCee----cC---CHHHHHhcCCEEEEEeC
Confidence            4789998 79999999999999999999999986644332211 2211    11   23344556777776653

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.15  E-value=0.00023  Score=55.25  Aligned_cols=34  Identities=26%  Similarity=0.386  Sum_probs=30.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +|.|+| +|.+|+.+++.|++.|++|++.+|+++.
T Consensus         6 kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A            6 NVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            789998 5999999999999999999999988654

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.15  E-value=0.00049  Score=55.32  Aligned_cols=32  Identities=28%  Similarity=0.451  Sum_probs=27.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~   33 (209)
                      ||.|.||+|.||+.+++.|.+++ .+++.+.+.
T Consensus        18 kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~   50 (359)
T 1xyg_A           18 RIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD   50 (359)
T ss_dssp             EEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred             EEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            79999999999999999998876 477777654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.14  E-value=8.2e-05  Score=60.87  Aligned_cols=69  Identities=25%  Similarity=0.304  Sum_probs=48.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |.+|+.+++.|...|. +|++++|+..+...+....+...  .+   .+++.+++.++|+||.+.+.
T Consensus       168 ~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~--~~---~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          168 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA--VR---FDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE--CC---GGGHHHHHHTCSEEEECCSS
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce--ec---HHhHHHHhcCCCEEEEccCC
Confidence            47999997 9999999999999998 89999987654322211112222  12   33456667899999999763

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.14  E-value=0.00043  Score=54.66  Aligned_cols=66  Identities=15%  Similarity=0.322  Sum_probs=45.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCce-EEEEccCCCHHHHHH-HhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGAL-ELVYGDVTDYRSLVD-ACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~-~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|..+++.|.+.|+  +|++.+|++++.+..... ++ .-...|+      .+ +++++|+||.+..
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~~~~~~~~------~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIIDEGTTSI------AKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCSEEESCT------TGGGGGCCSEEEECSC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCcchhcCCH------HHHhhccCCEEEEeCC
Confidence            5899999 79999999999999999  999999876543222111 11 0111222      23 5678999998764

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.14  E-value=9e-05  Score=58.76  Aligned_cols=73  Identities=19%  Similarity=0.236  Sum_probs=47.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc--CCCCCCCCCCCC-----ceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR--RTSDISGLPSEG-----ALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r--~~~~~~~~~~~~-----~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|.|+|+ |.+|++++..|.+.|++|++++|  ++++.+.+....     +..+.....++.++..++++++|+||-+.
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            89999995 99999999999999999999998  654332221110     11100001222224555678899999876


Q ss_pred             c
Q 028444           74 A   74 (209)
Q Consensus        74 ~   74 (209)
                      .
T Consensus        80 ~   80 (335)
T 1txg_A           80 S   80 (335)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.13  E-value=0.0064  Score=46.29  Aligned_cols=97  Identities=20%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC------------------------CCc--eEEEEccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS------------------------EGA--LELVYGDVT   54 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~------------------------~~~--~~~~~~Dl~   54 (209)
                      +|+|.|+ |++|+++++.|+..|. ++++++++.-....+..                        .+.  ++.+..+++
T Consensus        30 ~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~  108 (251)
T 1zud_1           30 QVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLT  108 (251)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             cEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            7999995 7799999999999995 77777664321111100                        012  334443443


Q ss_pred             CHHHHHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccce
Q 028444           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (209)
Q Consensus        55 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~  117 (209)
                       .+.+.++++++|+||.+..               |...-..+.++|.+..  ..+|+.+...
T Consensus       109 -~~~~~~~~~~~DvVi~~~d---------------~~~~r~~l~~~~~~~~--~p~i~~~~~g  153 (251)
T 1zud_1          109 -GEALKDAVARADVVLDCTD---------------NMATRQEINAACVALN--TPLITASAVG  153 (251)
T ss_dssp             -HHHHHHHHHHCSEEEECCS---------------SHHHHHHHHHHHHHTT--CCEEEEEEEB
T ss_pred             -HHHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHhC--CCEEEEeccc
Confidence             4566777888999998743               1223345666776653  3466665443

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.12  E-value=7.1e-05  Score=58.45  Aligned_cols=65  Identities=25%  Similarity=0.313  Sum_probs=44.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|++++.+.+... ++..    ..+.   .++++++|+||.+..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~----~~~~---~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAET----ASTA---KAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE----CSSH---HHHHHHCSEEEECCS
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCee----cCCH---HHHHhCCCEEEEECC
Confidence            5899999 79999999999999999999998876543322211 2221    1222   334566788887764

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.12  E-value=0.0023  Score=51.29  Aligned_cols=32  Identities=31%  Similarity=0.447  Sum_probs=27.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~   33 (209)
                      ||.|.||+|.||+.+++.|.+++ .+|+.+.++
T Consensus        10 kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A           10 KVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             eEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            79999999999999999998775 688877653

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.12  E-value=0.00022  Score=57.59  Aligned_cols=71  Identities=18%  Similarity=0.113  Sum_probs=50.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.||...++.+...|.+|+++++++.+.+.+.+ .+...+ .|..+.+.+.++..++|+||+++|.
T Consensus       197 ~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa~~v-i~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          197 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEV-VNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEE-eccccHHHHHHhhcCCCEEEECCCC
Confidence            6899997 889999999888899999999987765432211 122222 3556665555555689999999883

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.11  E-value=0.00028  Score=54.78  Aligned_cols=64  Identities=16%  Similarity=0.210  Sum_probs=47.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |+.|++++..|.+.|. +|+++.|+.++.+.+..  .+..+     ..+++.+ + ++|+|||+...
T Consensus       124 ~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~--~~~~~-----~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          124 ICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG--EFKVI-----SYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             EEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT--TSEEE-----EHHHHTT-C-CCSEEEECSST
T ss_pred             EEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH--hcCcc-----cHHHHHh-c-cCCEEEECCcc
Confidence            6899996 8999999999999998 89999998766554443  23222     2233334 4 89999998754

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.10  E-value=0.0024  Score=50.84  Aligned_cols=92  Identities=15%  Similarity=0.118  Sum_probs=53.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      |||.|.||+|.||+.+++.|.+++   .+++.+......-+... ..+......|+ +++    .+.++|+|+-|.+.. 
T Consensus         4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~~~~i~~~~~-~~~----~~~~vDvVf~a~g~~-   76 (336)
T 2r00_A            4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FNGKTVRVQNV-EEF----DWSQVHIALFSAGGE-   76 (336)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ETTEEEEEEEG-GGC----CGGGCSEEEECSCHH-
T ss_pred             cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ecCceeEEecC-ChH----HhcCCCEEEECCCch-
Confidence            489999999999999999998873   56666653211100000 00112111222 121    236899999887731 


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                                     ......+.+.+.+  .++|..|+.
T Consensus        77 ---------------~s~~~a~~~~~~G--~~vId~s~~   98 (336)
T 2r00_A           77 ---------------LSAKWAPIAAEAG--VVVIDNTSH   98 (336)
T ss_dssp             ---------------HHHHHHHHHHHTT--CEEEECSST
T ss_pred             ---------------HHHHHHHHHHHcC--CEEEEcCCc
Confidence                           1344555555553  367877775

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.10  E-value=0.0044  Score=49.84  Aligned_cols=25  Identities=24%  Similarity=0.411  Sum_probs=22.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH   25 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~   25 (209)
                      |||.|.||||++|+.+++.|.++++
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~   27 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTL   27 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCC
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCC
Confidence            3899999999999999999888765

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.10  E-value=0.00014  Score=58.43  Aligned_cols=71  Identities=11%  Similarity=-0.040  Sum_probs=49.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH-HHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.||...++.+...|.+|+++++++.+.+.+.+. +...+ .|..+. +....+..++|+||.++|.
T Consensus       182 ~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~v-~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          182 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM-GADHY-IATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-TCSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCCEE-EcCcCchHHHHHhhcCCCEEEECCCC
Confidence            6999999 9999999998888899999999887764432211 22222 244333 3333333579999999984

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=97.09  E-value=0.0019  Score=50.27  Aligned_cols=61  Identities=21%  Similarity=0.153  Sum_probs=46.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |++.|.| .|.||+.+++.|...|++|++.+|+..+...      +.       ..+++.++++++|+|+.+...
T Consensus       123 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~-------~~~~l~ell~~aDiV~l~~P~  183 (290)
T 3gvx_A          123 KALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV-------ISESPADLFRQSDFVLIAIPL  183 (290)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE-------ECSSHHHHHHHCSEEEECCCC
T ss_pred             chheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc------cc-------ccCChHHHhhccCeEEEEeec
Confidence            5788998 7999999999999999999999987654321      11       112455677889999888753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.08  E-value=0.0002  Score=59.47  Aligned_cols=37  Identities=27%  Similarity=0.337  Sum_probs=32.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (209)
                      +|+|+||+|.||...++.+...|.+|+++++++.+++
T Consensus       231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~  267 (456)
T 3krt_A          231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAE  267 (456)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            6999999999999999999999999999988765443

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.08  E-value=0.00013  Score=56.41  Aligned_cols=66  Identities=15%  Similarity=0.205  Sum_probs=45.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC---CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |++|++++..|.+.|. +|++..|+.++.+.+...   .++..+  ++.+.+   .  .++|+|||+-+.
T Consensus       122 ~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~l~---~--~~~DivInaTp~  191 (272)
T 3pwz_A          122 RVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEALE---G--QSFDIVVNATSA  191 (272)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGGGT---T--CCCSEEEECSSG
T ss_pred             EEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHHhc---c--cCCCEEEECCCC
Confidence            6899996 8999999999999995 999999986654332211   123332  222211   1  679999998653

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.07  E-value=0.00031  Score=54.88  Aligned_cols=67  Identities=15%  Similarity=0.194  Sum_probs=48.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ++++|.| .|.||+.+++.|...|++|++.+|+..+.+.... .++..+     +.+++.++++++|+|+.+..
T Consensus       156 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~-----~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          156 ANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF-----HISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCeec-----ChhhHHHHhcCCCEEEECCC
Confidence            4799999 6999999999999999999999987643221111 133332     22456677889999998874

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.07  E-value=0.00047  Score=55.02  Aligned_cols=68  Identities=22%  Similarity=0.283  Sum_probs=46.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHH-HHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.||..+++.|.+.|++|++.+|+++..+.... .++..    ..+.++ +..+..++|+||-+..
T Consensus         9 ~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-~G~~~----~~~~~e~~~~a~~~aDlVilavP   77 (341)
T 3ktd_A            9 RPVCILG-LGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-EGFDV----SADLEATLQRAAAEDALIVLAVP   77 (341)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-TTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence            4789998 7999999999999999999999988654332211 13321    123333 3444567899997764

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=97.06  E-value=0.00087  Score=51.70  Aligned_cols=65  Identities=26%  Similarity=0.300  Sum_probs=44.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceE-EEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE-LVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+++++.|.+.|++|++++|++++.+.+... ++. ...   .+.   .++ .++|+||.+..
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~---~~~---~~~-~~~D~vi~av~   66 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER-QLVDEAG---QDL---SLL-QTAKIIFLCTP   66 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TSCSEEE---SCG---GGG-TTCSEEEECSC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC-CCCcccc---CCH---HHh-CCCCEEEEECC
Confidence            8999999 79999999999999999999998876543222111 111 011   122   234 67898887765

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.06  E-value=0.0029  Score=43.62  Aligned_cols=83  Identities=25%  Similarity=0.307  Sum_probs=51.6

Q ss_pred             EEEEEcCC---ChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            2 KILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~---G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      +|.|.|+|   |-+|+.+++.|.+.|++|+.+.++.++.      .+...       ..++.++.+.+|+++-+-.    
T Consensus        16 ~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------~G~~~-------~~s~~el~~~vDlvii~vp----   78 (138)
T 1y81_A           16 KIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------EGLKC-------YRSVRELPKDVDVIVFVVP----   78 (138)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------TTEEC-------BSSGGGSCTTCCEEEECSC----
T ss_pred             eEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------CCeee-------cCCHHHhCCCCCEEEEEeC----
Confidence            68999997   8899999999999999977765543211      12221       2222334457898886643    


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                                  -.....+++.+.+. +++.++..+
T Consensus        79 ------------~~~v~~v~~~~~~~-g~~~i~~~~  101 (138)
T 1y81_A           79 ------------PKVGLQVAKEAVEA-GFKKLWFQP  101 (138)
T ss_dssp             ------------HHHHHHHHHHHHHT-TCCEEEECT
T ss_pred             ------------HHHHHHHHHHHHHc-CCCEEEEcC
Confidence                        12244455556554 456665554

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.06  E-value=7.3e-05  Score=58.70  Aligned_cols=35  Identities=17%  Similarity=0.220  Sum_probs=31.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      |+|.|+| .|.+|..+++.|.+.|++|++.+|++++
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~   42 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQA   42 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            5799997 7999999999999999999999997653

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=97.05  E-value=0.0018  Score=51.20  Aligned_cols=64  Identities=19%  Similarity=0.280  Sum_probs=48.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|-||+.++++|...|++|++.+|+........   .  .     ....++.++++++|+|+.+...
T Consensus       141 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---~--~-----~~~~~l~ell~~aDvV~l~lPl  204 (324)
T 3hg7_A          141 RTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD---Q--V-----YQLPALNKMLAQADVIVSVLPA  204 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS---E--E-----ECGGGHHHHHHTCSEEEECCCC
T ss_pred             ceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh---c--c-----cccCCHHHHHhhCCEEEEeCCC
Confidence            4788998 799999999999999999999998764332211   1  1     1245677888999999888764

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.05  E-value=0.00038  Score=54.14  Aligned_cols=64  Identities=19%  Similarity=0.204  Sum_probs=44.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+ ++++.+.+... ++.       -..+..++++++|+||-+..
T Consensus         4 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~-g~~-------~~~~~~~~~~~~D~vi~~vp   67 (295)
T 1yb4_A            4 MKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSL-GAV-------NVETARQVTEFADIIFIMVP   67 (295)
T ss_dssp             CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTT-TCB-------CCSSHHHHHHTCSEEEECCS
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHc-CCc-------ccCCHHHHHhcCCEEEEECC
Confidence            6899998 69999999999999999998887 65544333221 211       11223445567888887764

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.05  E-value=0.00013  Score=56.91  Aligned_cols=64  Identities=16%  Similarity=0.189  Sum_probs=44.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |+|.|+| .|.+|+++++.|.+.|++|++.+|++++.+.+... ++..    ..+.   .++++++|+||-+.
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~----~~~~---~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDA-GEQV----VSSP---ADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTT-TCEE----CSSH---HHHHHHCSEEEECC
T ss_pred             CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCee----cCCH---HHHHhcCCEEEEeC
Confidence            8899998 69999999999999999999999886644332221 2221    1122   33445677777765

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.04  E-value=0.00058  Score=53.46  Aligned_cols=40  Identities=30%  Similarity=0.381  Sum_probs=29.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS   42 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~   42 (209)
                      ||-++| -|.+|+.+++.|++.||+|++.+|++++.+.+.+
T Consensus         7 kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   46 (297)
T 4gbj_A            7 KIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK   46 (297)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT
T ss_pred             cEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            688998 7999999999999999999999999887766544

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=97.04  E-value=0.0015  Score=51.31  Aligned_cols=60  Identities=27%  Similarity=0.288  Sum_probs=44.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |++.|+| .|.||+.++++|...|++|++.+|+..  +.     +       .....++.++++++|+|+.+...
T Consensus       125 ~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~-----~-------~~~~~~l~ell~~aDvV~l~~P~  184 (303)
T 1qp8_A          125 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK--EG-----P-------WRFTNSLEEALREARAAVCALPL  184 (303)
T ss_dssp             CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC--CS-----S-------SCCBSCSHHHHTTCSEEEECCCC
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcc--cc-----C-------cccCCCHHHHHhhCCEEEEeCcC
Confidence            5788998 799999999999999999999888754  11     1       11112345678899999888653

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.03  E-value=8.1e-05  Score=57.93  Aligned_cols=38  Identities=21%  Similarity=0.360  Sum_probs=33.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (209)
                      |+|.|+| .|.+|..+++.|.+.|++|++.+|++++.+.
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~   39 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAP   39 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHH
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHH
Confidence            4799998 7999999999999999999999998765443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.01  E-value=0.0036  Score=49.33  Aligned_cols=74  Identities=15%  Similarity=0.072  Sum_probs=51.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC----CCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----DISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      +++|.|++.-+|+.+++.|++.|.+|+++.|+..    +...+... .........++++++.+.++++|+||.+.+..
T Consensus       179 ~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~-~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p  256 (320)
T 1edz_A          179 KCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN-KHHVEDLGEYSEDLLKKCSLDSDVVITGVPSE  256 (320)
T ss_dssp             EEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC-CCEEEEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred             EEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh-cccccccccccHhHHHHHhccCCEEEECCCCC
Confidence            7899998889999999999999999999987632    22222211 01111111144577888999999999988853

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.01  E-value=0.00026  Score=56.58  Aligned_cols=66  Identities=23%  Similarity=0.222  Sum_probs=47.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.||...++.+...|.+|+++++++.+.+.+.+. +...+.   ++.+.+.   +++|+|+++.|.
T Consensus       179 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~v~---~~~~~~~---~~~D~vid~~g~  244 (348)
T 3two_A          179 KVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM-GVKHFY---TDPKQCK---EELDFIISTIPT  244 (348)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT-TCSEEE---SSGGGCC---SCEEEEEECCCS
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc-CCCeec---CCHHHHh---cCCCEEEECCCc
Confidence            6899996 9999999999888999999999887765433222 333333   3444332   289999999883

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.99  E-value=0.007  Score=47.12  Aligned_cols=95  Identities=12%  Similarity=0.168  Sum_probs=59.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCC-------------------------CCCceEEEEccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLP-------------------------SEGALELVYGDVTD   55 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~-------------------------~~~~~~~~~~Dl~~   55 (209)
                      +|+|.| .|++|+++++.|+..| -++++++++.-+...+.                         ..-.++.+..++++
T Consensus        38 ~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~  116 (292)
T 3h8v_A           38 AVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITT  116 (292)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTS
T ss_pred             eEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCc
Confidence            699998 5999999999999999 47888876532111110                         01245556667766


Q ss_pred             HHHHHHHh-----------cCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           56 YRSLVDAC-----------FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        56 ~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+.+..++           +++|+||.+..               |...-..|.++|.+..  ..+|+.+
T Consensus       117 ~~~~~~~~~~~~~~~l~~~~~~DlVid~~D---------------n~~~R~~in~~c~~~~--~Pli~~g  169 (292)
T 3h8v_A          117 VENFQHFMDRISNGGLEEGKPVDLVLSCVD---------------NFEARMTINTACNELG--QTWMESG  169 (292)
T ss_dssp             HHHHHHHHHHHHHBSSSTTBCCSEEEECCS---------------SHHHHHHHHHHHHHHT--CCEEEEE
T ss_pred             HHHHHHHhhhhcccccccCCCCCEEEECCc---------------chhhhhHHHHHHHHhC--CCEEEee
Confidence            55555544           57899997742               2334455677777763  3455544

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.97  E-value=0.00015  Score=56.68  Aligned_cols=65  Identities=20%  Similarity=0.324  Sum_probs=45.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |+|.|+| .|.+|+.+++.|.+.|++|++.+|++++.+.+... ++..    ..+.   .++++++|+||.+..
T Consensus         5 ~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~----~~~~---~~~~~~~D~vi~~vp   69 (301)
T 3cky_A            5 IKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-GAQA----CENN---QKVAAASDIIFTSLP   69 (301)
T ss_dssp             CEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-TCEE----CSSH---HHHHHHCSEEEECCS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCee----cCCH---HHHHhCCCEEEEECC
Confidence            5899998 69999999999999999999998876543332221 2221    1222   344556888887763

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.97  E-value=0.00023  Score=55.30  Aligned_cols=66  Identities=21%  Similarity=0.220  Sum_probs=45.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC----CceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|+|+ |++|++++..|.+.|. +|++..|+.++.+.+...    ..+....  +.+      +..++|+||++-+.
T Consensus       127 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~--~~~------l~~~aDiIInaTp~  197 (281)
T 3o8q_A          127 ATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA--FEQ------LKQSYDVIINSTSA  197 (281)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEE--GGG------CCSCEEEEEECSCC
T ss_pred             CEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEee--HHH------hcCCCCEEEEcCcC
Confidence            37999996 8999999999999996 999999986654332211    1133332  211      12678999998764

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.96  E-value=0.00041  Score=56.63  Aligned_cols=72  Identities=25%  Similarity=0.205  Sum_probs=49.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC-------------CH-------HHHHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-------------DY-------RSLVD   61 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~-------------~~-------~~~~~   61 (209)
                      +++|+|+ |.||..+++.+...|.+|++++++..+++.... .+..++..|..             +.       +.+.+
T Consensus       174 ~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e  251 (401)
T 1x13_A          174 KVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAA  251 (401)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHHHHHHH
Confidence            7899995 999999999999999999999988665432221 14444332221             11       13666


Q ss_pred             HhcCcCEEEEcCcc
Q 028444           62 ACFGCHVIFHTAAL   75 (209)
Q Consensus        62 ~~~~~d~vi~~a~~   75 (209)
                      ++.++|+||.+++.
T Consensus       252 ~~~~aDvVI~~~~~  265 (401)
T 1x13_A          252 QAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHCSEEEECCCC
T ss_pred             HhCCCCEEEECCcc
Confidence            77789999999754

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.96  E-value=0.0038  Score=50.31  Aligned_cols=67  Identities=22%  Similarity=0.176  Sum_probs=51.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      ++|+|+|+ |..|+.+++.+.+.|++|++++.++... ....    -..+..|..|.+.+.+++.++|+|+..
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA----DEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS----SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC----ceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            27999996 7899999999999999999988754331 1111    135677999999998888889988754

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.95  E-value=0.0014  Score=51.93  Aligned_cols=63  Identities=17%  Similarity=0.238  Sum_probs=46.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++.|.| .|.||+.++++|...|++|++.+|+....+.+..     ...     .+++.++++++|+|+.+..
T Consensus       138 ktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-----~~~-----~~~l~ell~~aDvV~l~lP  200 (324)
T 3evt_A          138 QQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE-----TVA-----FTATADALATANFIVNALP  200 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE-----EEE-----GGGCHHHHHHCSEEEECCC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh-----ccc-----cCCHHHHHhhCCEEEEcCC
Confidence            4788998 7999999999999999999999998654432211     111     2345667888999987765

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.94  E-value=0.0045  Score=51.17  Aligned_cols=105  Identities=16%  Similarity=0.193  Sum_probs=61.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEE-------------ccCCCHHHHHHHhcCcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-------------GDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~Dl~~~~~~~~~~~~~d~   68 (209)
                      +|.|+| .|.+|..++..|++.|++|++++|++++.+.+.+. ...++.             +.+.--.+..++++++|+
T Consensus        10 ~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g-~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A           10 RIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQN-VMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             EEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            578888 79999999999999999999999998875544331 000000             001001123456788999


Q ss_pred             EEEcCccCCCC-CCCccchhhhHHHHHHHHHHHHHhcCCccE-EEEEc
Q 028444           69 IFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEK-IIYTS  114 (209)
Q Consensus        69 vi~~a~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~i~~s  114 (209)
                      ||-+-+..... ..      ..++.....+++.+.+..+... +|..|
T Consensus        88 vii~Vptp~~~~~~------~~Dl~~v~~v~~~i~~~l~~g~iVV~~S  129 (446)
T 4a7p_A           88 VFIAVGTPSRRGDG------HADLSYVFAAAREIAENLTKPSVIVTKS  129 (446)
T ss_dssp             EEECCCCCBCTTTC------CBCTHHHHHHHHHHHHSCCSCCEEEECS
T ss_pred             EEEEcCCCCccccC------CccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence            99886532110 11      2233334455566655543344 44444

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.94  E-value=0.0013  Score=49.88  Aligned_cols=32  Identities=28%  Similarity=0.480  Sum_probs=26.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEE-EcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRR   33 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~-~r~   33 (209)
                      |||.|+|+ |.+|+.+++.+.+++.++++. +|+
T Consensus         4 mkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~   36 (243)
T 3qy9_A            4 MKILLIGY-GAMNQRVARLAEEKGHEIVGVIENT   36 (243)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             eEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecC
Confidence            58999999 999999999999887777764 454

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	209
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-29
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-28
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-24
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-24
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	8e-23
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-21
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-21
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-19
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-19
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-17
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	6e-17
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-16
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-16
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	4e-16
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-15
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	6e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-13
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	8e-13
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-12
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-12
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-11
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-10
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	5e-10
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	1e-08
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	2e-08
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-07
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-07
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-07
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-06
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-06
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-06
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-06
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-06
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	4e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	5e-06
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	2e-05
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-05
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-05
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-05
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-04
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-04
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-04
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-04
d1vm6a3	128	c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate red	4e-04
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-04
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	6e-04
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	7e-04
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	7e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	0.001
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	0.001
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	0.001
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.002
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.002
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	0.003
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.003
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.004
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	0.004
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	0.004
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	0.004
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.004

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  109 bits (272), Expect = 5e-29
 Identities = 39/214 (18%), Positives = 77/214 (35%), Gaps = 27/214 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS------DISGLPSEGALELVYGDVT 54
           MKIL++G +G++G  +   ++K        + + +       +S +         + D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 55  DYRSLVDAC--FGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKET------ 104
           D   +      +    + H AA   V+  +  P+ F   N+ G   +++ A++       
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 105 --KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQ 155
             K   +  + S+    G        EN V    +  T        Y  SKA +D +   
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 156 -AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVR 188
              + GLP +       YGP       L+  ++ 
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVIL 213

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 3e-28
 Identities = 37/197 (18%), Positives = 75/197 (38%), Gaps = 17/197 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR----RTSDISGLPSEGALELVYGDVTDYR 57
           +IL++G +G++G  L   L+  GH V  +      R  ++         EL+  DV +  
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-- 60

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                      I+H A+      ++ +P +    N  G  N++  AK      +++  S+
Sbjct: 61  ---PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLAST 115

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYPGVIY 172
               G  + +   E+          +  Y+  K VA+ +       EG+ +        +
Sbjct: 116 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTF 175

Query: 173 GPG-KLTTGNLVAKLVR 188
           GP   +  G +V+  + 
Sbjct: 176 GPRMHMNDGRVVSNFIL 192

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 96.0 bits (238), Expect = 1e-24
 Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 19/202 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-----------RTSDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +                    ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 50  YGDVTDYRSLVDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +GD+ D   L     G   I H A  + V+  +   S F   NV+G + ++Q A +    
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPV 166
            ++++ S+    GS D     E+   E     + Y  SKA +D +A     + GL +   
Sbjct: 120 GRVVHVSTNQVYGSIDSGSWTESSPLEPN---SPYAASKAGSDLVARAYHRTYGLDVRIT 176

Query: 167 YPGVIYGPGKLTTGNLVAKLVR 188
                YGP +     L+   V 
Sbjct: 177 RCCNNYGPYQ-HPEKLIPLFVT 197

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 96.4 bits (239), Expect = 2e-24
 Identities = 35/228 (15%), Positives = 64/228 (28%), Gaps = 23/228 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----------GLPSEGALELVYG 51
             L++G +G  G  L   LL++G+ V  + RR S  +                   L YG
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 52  DVTDYRSLVDACFGC----HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET--K 105
           D++D  +L                  + V      P     V+  G   +++A +    +
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIV 164
              +    S+    G        E      +   + Y  +K  A  I +    S G+   
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETTPFYPR---SPYAVAKLYAYWITVNYRESYGMYAC 179

Query: 165 PVYPGVIYGPG---KLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHAI 209
                    P       T  +   +  +       L   +        
Sbjct: 180 NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG 227

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 91.5 bits (226), Expect = 8e-23
 Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 24/182 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++ ++G  G +G  +   L ++G     L  R                  ++ D R++ D
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHD 48

Query: 62  --ACFGCHVIFHTAALVEPW---LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             A      ++  AA V         P+ F   N+    N++ AA +   V K+++  S 
Sbjct: 49  FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSS 107

Query: 117 FALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQAASE-GLPIVPVYPGVIYG 173
                       E+++ +     T   Y  +K    K+      + G     V P  +YG
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 174 PG 175
           P 
Sbjct: 168 PH 169

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (215), Expect = 3e-21
 Identities = 39/193 (20%), Positives = 63/193 (32%), Gaps = 22/193 (11%)

Query: 2   KI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----------GLPSEGALELV 49
            + L++G +G  G  L   LL++G+ V  +VRR+S  +               EG ++L 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 50  YGDVTDYRSLVDACFGC----HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           YGD+TD   LV                 + V+           V+  G   ++ A K   
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121

Query: 106 --TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLP 162
                K    S+    G        E      +   + Y  +K  A  I +    +  L 
Sbjct: 122 LINSVKFYQASTSELYGKVQEIPQKETTPFYPR---SPYGAAKLYAYWIVVNFREAYNLF 178

Query: 163 IVPVYPGVIYGPG 175
            V         P 
Sbjct: 179 AVNGILFNHESPR 191

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 86.6 bits (213), Expect = 7e-21
 Identities = 38/184 (20%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS------DISGLPSEGALELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L    +       +           V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 55  DYRSLVDAC--FGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           +   + +         + H A L  V   +  P  ++  NV G   ++ A +    V+  
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNF 119

Query: 111 IYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV 170
           I++SS    G        E+             +         LQ A     I  +    
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 171 IYGP 174
             G 
Sbjct: 180 PVGA 183

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 82.3 bits (202), Expect = 2e-19
 Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 26/234 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-------RTSDISGLPSEGALELVYGDV 53
             I+V+G +G++G    H +      V   V          +++  +  +  +ELV GD+
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDR-VELVVGDI 61

Query: 54  TDYRSLVDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            D   +         I H A  +  +  L DPS F   N  G   +++AA++       +
Sbjct: 62  ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHV 121

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQ-AASEGLPI 163
            T   +        +    +   EK+           Y  +KA +D I      S G+  
Sbjct: 122 STDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKA 181

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLV--------FFHCQITCHAI 209
                   YGP +     +  ++  +L      L         + H       +
Sbjct: 182 TISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 81.6 bits (200), Expect = 3e-19
 Identities = 41/217 (18%), Positives = 73/217 (33%), Gaps = 16/217 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDY 56
             LV+G +G  G  L   LL++G+ V  LV R S      +  L  EG ++   GD+ D 
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSR----FFAVNVEGLKNVVQAAKETKTVEKIIY 112
            S+  A              + ++            V+  G+ ++++A ++     +   
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVI 171
            S+    G       DEN      Y  + Y  +K     I +    S GL          
Sbjct: 122 ASTSEMFGLIQAERQDENTPF---YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178

Query: 172 YGP---GKLTTGNLVAKLVRLLFSQHFSLVFFHCQIT 205
             P    +  T  +   + R+   +   L   +    
Sbjct: 179 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK 215

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 76.9 bits (188), Expect = 3e-17
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +KI ++GA G++   +   L  +GH V A   + ++          E    D+    + +
Sbjct: 16  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE-HMTEDMFCDEFHLVDLRVMENCL 74

Query: 61  DACFGCHVIFHTAAL---VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
               G   +F+ AA    +     + S     N     N+++AA+    +++  Y SS  
Sbjct: 75  KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSAC 133

Query: 118 ALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GLPIVPVYPGVIY 172
                         + E   +  +    +   K   +++      + G+         IY
Sbjct: 134 IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIY 193

Query: 173 GPG 175
           GP 
Sbjct: 194 GPF 196

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 75.5 bits (184), Expect = 6e-17
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 9/142 (6%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDY 56
           K+L++G  G+LG  L    L QG  +           T ++  L S G  E V+GD+ + 
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 57  RSLVDACFGCH--VIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
             +            FH A    +   + +P   F +NV G  N+++A ++  +   IIY
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 113 TSSFFALGSTDGYIADENQVHE 134
           +S+    G  + Y  +E +   
Sbjct: 122 SSTNKVYGDLEQYKYNETETRY 143

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 73.9 bits (180), Expect = 3e-16
 Identities = 26/144 (18%), Positives = 42/144 (29%), Gaps = 12/144 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSL 59
            I V GA+G  G  L       GH VRA V     +    L +   + L  G + +   L
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL 64

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           +D  F    +              +      +   K++  AAK      +    SS    
Sbjct: 65  MDTLFEGAHLAFIN---------TTSQAGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDH 114

Query: 120 GSTDGYIADENQVHEEKYFCTQYE 143
                + A      +        +
Sbjct: 115 SLYGPWPAVPMWAPKFTVENYVRQ 138

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 73.1 bits (178), Expect = 4e-16
 Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 20/206 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----------DISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L    +           +         + + G
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 52  DVTDYRSLVDACFG--CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ +     +AC G    +       V   + DP    A N++G  N++ AA++ K  + 
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV-QS 136

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYP 168
             Y +S    G   G    E+ + +     + Y  +K V +  A   +   G   + +  
Sbjct: 137 FTYAASSSTYGDHPGLPKVEDTIGKPL---SPYAVTKYVNELYADVFSRCYGFSTIGLRY 193

Query: 169 GVIY---GPGKLTTGNLVAKLVRLLF 191
             ++            ++ K    + 
Sbjct: 194 FNVFGRRQDPNGAYAAVIPKWTSSMI 219

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 73.3 bits (178), Expect = 4e-16
 Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 16/222 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL----ELVYGDVTDYR 57
           ++ V+G +G+ GG L   L   G +V+        +  L     +    +   GD+ D  
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 58  SLVDACFGCHVIFHTAALVEPWLPD----PSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            L+++              +P +      P   ++ NV G   +++A +    V+ ++  
Sbjct: 70  KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 129

Query: 114 SSFFALGSTDGYIADENQVH--------EEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
           +S     + +                    K        S   +          G  +  
Sbjct: 130 TSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVAT 189

Query: 166 VYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCH 207
           V  G + G G      +V  ++R        ++     I   
Sbjct: 190 VRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW 231

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 72.2 bits (175), Expect = 1e-15
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE-------LVYGDVT 54
            +LV+GA+G++   +   LL+ G+ VR   R  S ++ L      +        V  D+ 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              +  D            A V  +           + G  N ++AA  T +V++ + TS
Sbjct: 73  KQGAY-DEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 115 SFFA 118
           S  +
Sbjct: 132 STVS 135

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (158), Expect = 6e-14
 Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 10/193 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI + GA+G  G       ++ G+ V  LVR +S +       A  +V GDV     + 
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +            +      V  EG +N+V A K    V+K++  +S F L 
Sbjct: 63  KTVAGQDAVIVLLG-----TRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLW 116

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK---L 177
                      V ++     +  R   +     +       P+   Y   + G G    +
Sbjct: 117 DPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVI 176

Query: 178 TTGNLVAKLVRLL 190
           +  +L   ++R L
Sbjct: 177 SKHDLGHFMLRCL 189

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 65.9 bits (159), Expect = 1e-13
 Identities = 23/149 (15%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA-------LELVYGDV 53
            ++L+ G +GY+G R+ +A +  GH    L R     +    +          +L+   +
Sbjct: 4   SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            D++ LVDA     V+                  + ++     +V+A KE   +++ + +
Sbjct: 64  DDHQRLVDALKQVDVVISAL---------AGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 114

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQY 142
                    +  +   +    +K    + 
Sbjct: 115 EFGMDPDIMEHALQPGSITFIDKRKVRRA 143

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 63.9 bits (154), Expect = 8e-13
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 20/192 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----------GLPSEGALELVY 50
             L++G +G  G  L   LL +G+ V  L+RR+S+ +              ++  ++L Y
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 51  GDVTDYRSLVDACFGCHVIFHTAALVEPWLP----DPSRFFAVNVEGLKNVVQAAKETKT 106
            D+TD  SL                 +  +      P     V   G   +++A +    
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYF--CTQYERSKAVADKIALQAA-SEGLPI 163
                    ++  GS++ + +      E   F   + Y  SK  A    +    + GL  
Sbjct: 123 DSGRTVK--YYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 180

Query: 164 VPVYPGVIYGPG 175
                     P 
Sbjct: 181 CNGILFNHESPR 192

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 63.4 bits (152), Expect = 1e-12
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
          M++L+ G +G++G  L   LL++ H  V  L   +  IS   +      V GD++ +   
Sbjct: 1  MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

Query: 60 VD 61
          ++
Sbjct: 61 IE 62

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.1 bits (152), Expect = 1e-12
 Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 17/185 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-------ISGLPSEGALELVYGDVTD 55
           +LV+G +GY+G      L++ G+        ++        +  L     +     D+ D
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHH-IPFYEVDLCD 62

Query: 56  YRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            + L      +    + H A    V      P R++  N+ G   +++  ++   V K +
Sbjct: 63  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ-YNVSKFV 121

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCT-QYERSKAVADKI---ALQAASEGLPIVPVY 167
           ++SS    G    +        E     T  Y  +K   + I      +  +      + 
Sbjct: 122 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 181

Query: 168 PGVIY 172
                
Sbjct: 182 YFNPI 186

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (141), Expect = 4e-11
 Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 21/191 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA------------LELV 49
           K+LV+G +GY+G      LL+ G+    +    +   G  S               +E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 50  YGDVTDYRSLVDACFGCHVIFHTA----ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
             D+ D  +L         +          V   +  P  ++ VN+ G   +++  K   
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK--IALQAASEGLPI 163
               +  +S+       +      ++ H        Y +SK   ++    L  A +    
Sbjct: 124 VKNLVFSSSATV---YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180

Query: 164 VPVYPGVIYGP 174
           V +      G 
Sbjct: 181 VLLRYFNPTGA 191

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 57.5 bits (137), Expect = 1e-10
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL--------ELVYGD 52
           +IL+ GA+GY+G  +  A L  GH    LVR ++  S       L         +V+G 
Sbjct: 4  SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63

Query: 53 VTDYRSLVDACFGCHVIFHTAALVEPW 79
          + D+ SLV+A     V+  T   ++  
Sbjct: 64 IDDHASLVEAVKNVDVVISTVGSLQIE 90

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.8 bits (135), Expect = 2e-10
 Identities = 24/178 (13%), Positives = 45/178 (25%), Gaps = 3/178 (1%)

Query: 1   MK-ILVSGASGYLGGRLCHALLKQGHS--VRALVRRTSDISGLPSEGALELVYGDVTDYR 57
           +  +LV+GASG  G  +   L +       + LVR       +  E  + +      D  
Sbjct: 3   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSI 62

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           +         VI  +A        DP++                 +    +  I  +   
Sbjct: 63  NPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA 122

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
            +       +      +                K     A  G P   +  G +    
Sbjct: 123 GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 180

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 55.6 bits (132), Expect = 5e-10
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 22/176 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  +   L  +   V     +  DI+             +V       
Sbjct: 2   MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT-------------NVLAVNKFF 48

Query: 61  DAC-FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           +       +       V+         + +N  G KN+  AA         I T      
Sbjct: 49  NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYV--- 105

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
                +  +  +   E               +      +       V    +YG G
Sbjct: 106 -----FDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDG 156

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.9 bits (122), Expect = 1e-08
 Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 22/89 (24%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISGLPSEGA------------ 45
           +++V G  GY G      L K+ + V     LVRR  D                     
Sbjct: 2  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61

Query: 46 -------LELVYGDVTDYRSLVDACFGCH 67
                 +EL  GD+ D+  L ++     
Sbjct: 62 KALTGKSIELYVGDICDFEFLAESFKSFE 90

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 51.1 bits (120), Expect = 2e-08
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 13/62 (20%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
          M IL+ G +G +G  L  +L   G+ +   V                   GD ++ + + 
Sbjct: 1  MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE-------------FCGDFSNPKGVA 47

Query: 61 DA 62
          + 
Sbjct: 48 ET 49

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (114), Expect = 1e-07
 Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 16/183 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL- 59
           + LV+GA   +G     AL   G  V A+ R  SD+  L  E   +E V  D+ D+ +  
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATE 66

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
                   VD       +      +E       R F+VN+  +  V Q          + 
Sbjct: 67  KALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP 126

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
            +    +         +       K   T   ++      +A++     + +  V P V+
Sbjct: 127 GSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKA------MAMELGPHKIRVNSVNPTVV 180

Query: 172 YGP 174
              
Sbjct: 181 LTD 183

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 3e-07
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 16/183 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL- 59
           ++LV+GA   +G     AL   G  V A+ R  +D+  L  E   +E V  D+ D+ +  
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATE 68

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
                   VD       +      +E       R F VN+  +  V Q          + 
Sbjct: 69  RALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
                 +   +   + + +     K       +       +AL+     + +  V P V+
Sbjct: 129 GAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKV------MALELGPHKIRVNAVNPTVV 182

Query: 172 YGP 174
              
Sbjct: 183 MTS 185

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.7 bits (109), Expect = 3e-07
 Identities = 7/37 (18%), Positives = 18/37 (48%)

Query: 2  KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS 38
          ++L++GA+G  G  L   +L +    + +      ++
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA 40

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 46.6 bits (110), Expect = 4e-07
 Identities = 30/190 (15%), Positives = 52/190 (27%), Gaps = 32/190 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTD 55
            ++   A G +G      L+K+      ++ R  + + L        +  +     DVT 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 56  YRSLVDACF----------GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
             +                   +                R  A+N  GL N   A  +  
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDDHQI----ERTIAINFTGLVNTTTAILDFW 122

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGL 161
              K         + S  G+ A              Y  SKA      + +A  A   G+
Sbjct: 123 DKRKGGPGGIIANICSVTGFNAIHQVPV--------YSASKAAVVSFTNSLAKLAPITGV 174

Query: 162 PIVPVYPGVI 171
               + PG+ 
Sbjct: 175 TAYSINPGIT 184

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (105), Expect = 1e-06
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 1  MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS 38
            + + GASG  G  L   +L+QG    V  + RR     
Sbjct: 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD 54

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 45.6 bits (106), Expect = 1e-06
 Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 23/92 (25%)

Query: 1  MKILVSGASGYLGGRLCHALLKQ-GHSVRAL----------------------VRRTSDI 37
          M++LV G +GY+G     ALL+   HSV  +                      ++++   
Sbjct: 3  MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

Query: 38 SGLPSEGALELVYGDVTDYRSLVDACFGCHVI 69
              ++    L  GDV +   L         I
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPI 94

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 29/190 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-- 59
            +LV+G +  +G  +  A  ++G  V AL     +   +           D+ D R    
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALV-ALCDLRPEGKEVAEAIGGAFFQVDLEDERERVR 65

Query: 60  -----------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
                      VD       I    + +   LP+  R   VN+    ++   A       
Sbjct: 66  FVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 125

Query: 109 KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIV 164
                     + S  G  A++            Y  SK     +   +AL  A   + + 
Sbjct: 126 GGGA---IVNVASVQGLFAEQENAA--------YNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 165 PVYPGVIYGP 174
            V PG I   
Sbjct: 175 AVAPGAIATE 184

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 19/146 (13%), Positives = 40/146 (27%), Gaps = 21/146 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDYR 57
           +L++GA   +G    +   K    +         +    ++       +     D ++  
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE 69

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA--- 101
            +             V        + +T+ L     P   + F VNV       +A    
Sbjct: 70  DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 129

Query: 102 KETKTVEKIIYTSSFFALGSTDGYIA 127
                   I+  +S     S    +A
Sbjct: 130 MTKNNHGHIVTVASAAGHVSVPFLLA 155

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (105), Expect = 2e-06
 Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 25/142 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTD 55
            LV+GASG +G  +  AL++QG  V    R   +I  L +E       G L     D+++
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 56  YRSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA- 101
              +             VD C     +     L+          F VNV  L    + A 
Sbjct: 73  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 132

Query: 102 ---KETKTVE-KIIYTSSFFAL 119
              KE    +  II  +S    
Sbjct: 133 QSMKERNVDDGHIININSMSGH 154

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 31/200 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSE--GALELVYGDVTDYRS 58
           ++V+GA+  +G  L   L+K  +     A  R     + L S     + ++   VT  +S
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKS 65

Query: 59  L---------------VDACFGCHVIFHT-AALVEPWLPDPSRFFAVNVEGLKNVVQAA- 101
           L               +        +  +     EP     +    VN   +  + Q   
Sbjct: 66  LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125

Query: 102 ------KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADK 151
                    ++ +++  + +     S+      +N     ++    Y  SKA        
Sbjct: 126 PLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRT 185

Query: 152 IALQAASEGLPIVPVYPGVI 171
           +A+    + + +V   PG +
Sbjct: 186 LAVDLKDDNVLVVNFCPGWV 205

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 43.8 bits (102), Expect = 4e-06
 Identities = 37/196 (18%), Positives = 61/196 (31%), Gaps = 15/196 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+G +G +GG++   L ++G     LV R    SG  ++GA ELV            A
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSR----SGPDADGAGELVAELEALGARTTVA 67

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
                       L+     D       +     +       T    +    +      + 
Sbjct: 68  ACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNL 127

Query: 123 DGYIADENQVHEEKYFCTQ----------YERSKAVADKIALQAASEGLPIVPVYPGVIY 172
                + +      +              Y    A  D +A Q  S+GLP   V  G   
Sbjct: 128 HELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWA 187

Query: 173 GPGKLTTGNLVAKLVR 188
           G G +  G +  +  R
Sbjct: 188 GSG-MAEGPVADRFRR 202

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 43.6 bits (102), Expect = 5e-06
 Identities = 36/187 (19%), Positives = 59/187 (31%), Gaps = 21/187 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            L++G++  +G     A +++G  V              +E   A   +  DVTD  S+ 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASID 67

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       +D       +F  A +VE       R FA+NV G   ++QA       
Sbjct: 68  RCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIA 127

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
                     A  +     A        K       +S        L     G+ +  + 
Sbjct: 128 GGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQS------AGLNLIRHGINVNAIA 181

Query: 168 PGVIYGP 174
           PGV+ G 
Sbjct: 182 PGVVDGE 188

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 16/182 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSV-------RALVRRTSDISGLPSEGALELVYGDVTD 55
            LV+GA+  +G     ALL +G  V        A V+  + +           +  DV D
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 65

Query: 56  YRSL------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
            + L      V   FG   I    A V     +  +   +N+  + +      +  + + 
Sbjct: 66  QQQLRDTFRKVVDHFGRLDILVNNAGVNNE-KNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                    + S  G +    Q                 +  +A    + G+ +  + PG
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPV--YCASKHGIVGFTRSAALAANLMNSGVRLNAICPG 182

Query: 170 VI 171
            +
Sbjct: 183 FV 184

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 42.3 bits (97), Expect = 2e-05
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
          I+V+G +G++G  +  AL  +G +   +V    D  G      ++L   D  D    +  
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD--GTKFVNLVDLNIADYMDKEDFLIQ 59

Query: 63 CFGCHVIFHTAA 74
                     A
Sbjct: 60 IMAGEEFGDVEA 71

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 35/193 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL-- 59
           ++V+G    +G  +  A +  G  V    +  S    L  E      +  DVT    +  
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKT 68

Query: 60  -----------VDACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKET--K 105
                      +D               E        +   +N+ G   + + A     K
Sbjct: 69  LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 128

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGL 161
           +   +I  SS          +               Y  +K     +   +AL  +  G+
Sbjct: 129 SQGNVINISSLVGAIGQAQAVP--------------YVATKGAVTAMTKALALDESPYGV 174

Query: 162 PIVPVYPGVIYGP 174
            +  + PG I+ P
Sbjct: 175 RVNCISPGNIWTP 187

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 26/191 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDY- 56
            LV+G S  +G  +   L   G SV    R   +++   ++       +E    D++   
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS 70

Query: 57  --RSLVDAC---FGCHV--------IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             + L++     F   +        I       +  + D S   ++N E   ++   A  
Sbjct: 71  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 130

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                +     +   + S  G +A   +      +         +   +A + A + + +
Sbjct: 131 FLKASERG---NVVFISSVSGALAVPYE----AVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 164 VPVYPGVIYGP 174
             V PGVI   
Sbjct: 184 NGVGPGVIATS 194

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 41.2 bits (96), Expect = 3e-05
 Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 22/147 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
           +L++G +  LG  L    + +G  V  L +    ++ L ++    +  + GDV       
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQK 67

Query: 60  ------------VDACFGCHVIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAK 102
                       +D       I+  +  +               F +NV+G  + V+A  
Sbjct: 68  QAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACL 127

Query: 103 ETKTVEK--IIYTSSFFALGSTDGYIA 127
                 +  +I+T S        G   
Sbjct: 128 PALVASRGNVIFTISNAGFYPNGGGPL 154

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 27/192 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYR 57
            +++G +G +G       ++ G  V  +     D      + + S   +  V+ DVT   
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKV-VIADIADDHGQKVCNNIGSPDVISFVHCDVTKDE 67

Query: 58  SL-------------VDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAK 102
            +             +D  FG   +  T   +++E    D  R   +NV G   V + A 
Sbjct: 68  DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127

Query: 103 ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
                 K        ++ S        +     K+       S      +  +    G+ 
Sbjct: 128 RVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTS------LCTELGEYGIR 181

Query: 163 IVPVYPGVIYGP 174
           +  V P ++  P
Sbjct: 182 VNCVSPYIVASP 193

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 32/229 (13%), Positives = 66/229 (28%), Gaps = 48/229 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALV-------RRTSDISGLPSE-----GALELVY 50
           +L++GA   +G  +     +                R  +D+  +  E        + + 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 51  GDVTDYRSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNV 97
            D++D   +             +D       +    AL +    D       N++G   +
Sbjct: 64  ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 123

Query: 98  VQAAKETKTVEK---IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL 154
            QA       +    I + +S  A  +                +C      + + + + L
Sbjct: 124 TQALFALMERQHSGHIFFITSVAATKAFRHSSI----------YCMSKFGQRGLVETMRL 173

Query: 155 QAASEGLPIVPVYPGVIYGP----------GKLTTGNLVAKLVRLLFSQ 193
            A    + I  V PG +Y P            +     +A  V   + Q
Sbjct: 174 YARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQ 222

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 25/191 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDY 56
           ++++G+S  LG  +      +   V    R   D +    E      G    V GDVT  
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69

Query: 57  RSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             +             +D       + +  +  E  L D ++    N+ G     + A +
Sbjct: 70  SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                 I  T    +                 K        +      +AL+ A +G+ +
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET------LALEYAPKGIRV 183

Query: 164 VPVYPGVIYGP 174
             + PG I  P
Sbjct: 184 NNIGPGAINTP 194

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 25/189 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LV+G +  +G  +   LL +G  V       +    L +E       V  DV+      
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWT 68

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       ++       I     +    L D SR   +N E +    Q        
Sbjct: 69  LVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE 128

Query: 108 EK--IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
               II  +S  +    + Y          K   +   R+ A+    + +     + +  
Sbjct: 129 TGGSIINMASVSSWLPIEQYAG----YSASKAAVSALTRAAAL----SCRKQGYAIRVNS 180

Query: 166 VYPGVIYGP 174
           ++P  IY P
Sbjct: 181 IHPDGIYTP 189

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 16/117 (13%), Positives = 40/117 (34%), Gaps = 19/117 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYR 57
            +++G +  +G  +    +++G  V  +  R SD+       + +   ++    D +D  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKV-MITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDED 67

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                          V        I    ++ E    +  +  AVN++G+    +  
Sbjct: 68  GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 33/200 (16%), Positives = 54/200 (27%), Gaps = 45/200 (22%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV------------- 49
           +LV+GA G LG     A  ++G  V                 A + V             
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 50  -YGDVTDYRSLV----------DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVV 98
            Y  V     LV          D       I    +       D      V++ G   V 
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVT 129

Query: 99  QAAKETKTVEK---IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADK 151
           +AA +    +    II T+S   +    G                 Y  +K     +A+ 
Sbjct: 130 RAAWDHMKKQNYGRIIMTASASGIYGNFGQAN--------------YSAAKLGLLGLANT 175

Query: 152 IALQAASEGLPIVPVYPGVI 171
           + ++     +    + P   
Sbjct: 176 LVIEGRKNNIHCNTIAPNAG 195

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Length = 128

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 14/119 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK  + G SG +G  +     ++GH +   V           +  ++    +       +
Sbjct: 1   MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEELDSPDVVIDFSSPEALPKTVDL 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
              +   ++  T AL E              E L+ + + +KE   V+    T      
Sbjct: 61  CKKYRAGLVLGTTALKE--------------EHLQMLRELSKEVPVVQAYSRTVFAIGA 105

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 30/191 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LV+GAS  +G  +   L  +G  V       +    +        + +  +VTD  S+ 
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 66

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       VD       I     L+     + +     N+  +  + +A       
Sbjct: 67  SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK 126

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPI 163
           ++         +GS  G + +  Q +        Y  +KA     +  +A + AS G+ +
Sbjct: 127 KR---HGRIITIGSVVGTMGNGGQAN--------YAAAKAGLIGFSKSLAREVASRGITV 175

Query: 164 VPVYPGVIYGP 174
             V PG I   
Sbjct: 176 NVVAPGFIETD 186

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.4 bits (86), Expect = 6e-04
 Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 42/228 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LVSG +  +G     A++ +G  V        +   + +E   A   V+ DVT      
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWK 68

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET--- 104
                       +        I +   + +  L +  R   VN+ G+   ++A  +    
Sbjct: 69  AAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE 128

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIV 164
                II  SS   L  T             K+      +S       AL+    G+ + 
Sbjct: 129 AGRGSIINISSIEGLAGTVACHGY----TATKFAVRGLTKS------TALELGPSGIRVN 178

Query: 165 PVYPGVIYGP--------------GKLTTGNLVAKLVRLLFSQHFSLV 198
            ++PG++  P              G+      V+ LV  L S   S  
Sbjct: 179 SIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYS 226

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 15/114 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
           ++++G +  LG       +  G  V        + +    E   A    + DVT      
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQ 67

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                       VD       I     L    +    +   +N+ G+   ++  
Sbjct: 68  RVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTV 121

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 37.1 bits (85), Expect = 7e-04
 Identities = 38/189 (20%), Positives = 55/189 (29%), Gaps = 30/189 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
            LV+G +  LG     AL  +G+ V  L  R            L  V GDVT    +  A
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLR-------REGEDLIYVEGDVTREEDVRRA 56

Query: 63  CFGCHVIFHTAALV----------------EPWLPDPSRFFAVNVEGLKNVVQAA---KE 103
                      A+V                   L    R   VN+ G  NV++ A     
Sbjct: 57  VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMR 116

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
               +            S   +     Q      +        A+    A + A  G+ +
Sbjct: 117 ENPPDAEGQRGVIVNTASVAAFEGQIGQAA----YAASKGGVVALTLPAARELAGWGIRV 172

Query: 164 VPVYPGVIY 172
           V V PG+  
Sbjct: 173 VTVAPGLFD 181

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 26/192 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDY 56
            +LV+G +  +G  +       G  +    R   +++   S+       +     D +  
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 69

Query: 57  RSL--------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAK 102
                            +D          +   ++    D S   + N+E   ++ Q A 
Sbjct: 70  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 129

Query: 103 ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
                          ++          +     K    Q  R+      +A + AS+G+ 
Sbjct: 130 PLLKASGCGNIIFMSSIAGVVSAS-VGSIYSATKGALNQLARN------LACEWASDGIR 182

Query: 163 IVPVYPGVIYGP 174
              V P VI  P
Sbjct: 183 ANAVAPAVIATP 194

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALEL------VYGDVT 54
           MK+ V GA+G +G  L   L  Q  S   L     DI+ +    A++L      V     
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSL--YDIAPVTPGVAVDLSHIPTAVKIKGF 58

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                  A  G  V+  +A +      D S  F VN   +KN+VQ   +T     I   +
Sbjct: 59  SGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 35.3 bits (81), Expect = 0.001
 Identities = 28/119 (23%), Positives = 36/119 (30%), Gaps = 9/119 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTD 55
           K+ V GASG +G  L   LLK    V  L     DI+  P      S             
Sbjct: 2   KVAVLGASGGIGQPLSL-LLKNSPLVSRLTLY--DIAHTPGVAADLSHIETRATVKGYLG 58

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              L D   GC V+   A +           F  N   +  +  A  +      I   S
Sbjct: 59  PEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 32/189 (16%), Positives = 59/189 (31%), Gaps = 24/189 (12%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDYRS 58
           LV+GA   +G  +   L+K G +V       +    + SE     G    V  DV+D   
Sbjct: 5   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQ 64

Query: 59  L-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           +              D       +  +  +         + + +NV+G+   +QAA E  
Sbjct: 65  VFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAF 124

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
             E            +      +       K+      ++       A   A  G+ +  
Sbjct: 125 KKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQT------AARDLAPLGITVNG 178

Query: 166 VYPGVIYGP 174
             PG++  P
Sbjct: 179 YCPGIVKTP 187

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 31/190 (16%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDYRS 58
           LV+GA+  +G  +   L K+G  V    R    +     E        +    DV     
Sbjct: 6   LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPE 65

Query: 59  L-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA-KET 104
           +             VD            A  E            N+ G+  V +   K  
Sbjct: 66  IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAG 125

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIV 164
             +E+        A       +         K+    + ++      + L+ A  G+ + 
Sbjct: 126 GMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKA------LGLELARTGITVN 179

Query: 165 PVYPGVIYGP 174
            V PG +  P
Sbjct: 180 AVCPGFVETP 189

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 9/108 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD------- 55
           I+++ A+  +G     A  ++G  V A     S +  L     ++    DVT        
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQF 68

Query: 56  --YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                 +D  F      H   +++    D      +NV  +  +++A 
Sbjct: 69  ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAF 116

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 27/191 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGA-LELVYGDVTDY 56
            L +GA   +G  +   L ++G SV      +S      ++ L   GA    +  D++  
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 68

Query: 57  RSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             +             +D       +      +E       + F +N  G   V Q   +
Sbjct: 69  SEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLK 128

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                  I  +S  A  +    I +       K     + R+       A+   ++G+ +
Sbjct: 129 HCRRGGRIILTSSIA--AVMTGIPNHALYAGSKAAVEGFCRA------FAVDCGAKGVTV 180

Query: 164 VPVYPGVIYGP 174
             + PG +   
Sbjct: 181 NCIAPGGVKTD 191

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 25/188 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-- 59
            +L++GA+  +G        K+G  + A       +           V  DV D  S+  
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVER 66

Query: 60  -----------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
                      +D       I       +  L D      VN+ G   V +AA E    +
Sbjct: 67  GFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126

Query: 109 KIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKIALQAASEGLPIVPV 166
                     L ++  Y+ +  Q +            R+      +AL+    G+ +  +
Sbjct: 127 N----PGSIVLTASRVYLGNLGQANYAASMAGVVGLTRT------LALELGRWGIRVNTL 176

Query: 167 YPGVIYGP 174
            PG I   
Sbjct: 177 APGFIETR 184

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 35.1 bits (80), Expect = 0.004
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 12/92 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALEL------VYGDVTD 55
            I+V+G +  +G     A+   G +V  + R  +D   +  +   E          DV++
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 56  YRSL------VDACFGCHVIFHTAALVEPWLP 81
              +      +DA  G        A V    P
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVKP 102

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 25/198 (12%), Positives = 52/198 (26%), Gaps = 40/198 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--------PSEGALELVYGDVT 54
            +++G+S  +G        ++G  V    R    +            SE  +  V  DVT
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 55  DYRSL-------------VDACFGCHVIFHTAALVEPWLPDP----SRFFAVNVEGLKNV 97
                             +D            +  +               +N+  +  +
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIAL 127

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIA 153
            + A    +  K              G  A  +  +        Y  +KA         A
Sbjct: 128 TKKAVPHLSSTKGEI---VNISSIASGLHATPDFPY--------YSIAKAAIDQYTRNTA 176

Query: 154 LQAASEGLPIVPVYPGVI 171
           +     G+ +  + PG++
Sbjct: 177 IDLIQHGIRVNSISPGLV 194

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 25/192 (13%), Positives = 54/192 (28%), Gaps = 31/192 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYR 57
            +++G +  +G  +      +G  +       +      I  L     +  V  DV+   
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG--RRVLTVKCDVSQPG 65

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET 104
            +              D       I+      E       + F +NV+    + +A    
Sbjct: 66  DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 125

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEE--KYFCTQYERSKAVADKIALQAASEGLP 162
                         L ST  ++  E   H    K     + R+      +A     +G+ 
Sbjct: 126 MKRNG---WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRA------LASDLGKDGIT 176

Query: 163 IVPVYPGVIYGP 174
           +  + P ++   
Sbjct: 177 VNAIAPSLVRTA 188

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 34.7 bits (79), Expect = 0.004
 Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 25/188 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL 59
            ILV+GA+  +G        ++G S+ A+ R    ++   +        V  DV+D +++
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAV 66

Query: 60  -------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT 106
                        +        + H+A      L    +   VN+ G   V + A E   
Sbjct: 67  EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE 126

Query: 107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPV 166
               +  +   A     G           K       R+      +AL+ A +G+ +  +
Sbjct: 127 EGGSLVLTGSVAGLGAFGLAH----YAAGKLGVVGLART------LALELARKGVRVNVL 176

Query: 167 YPGVIYGP 174
            PG+I  P
Sbjct: 177 LPGLIQTP 184

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 32/197 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--------PSEGALELVYGDVT 54
           ++++G+S  +G        ++G +V    R +  +            SE  +  V  DVT
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 55  DY---RSLVDAC---FGCHVIFHTAA-----------LVEPWLPDPSRFFAVNVEGLKNV 97
                  ++++    FG   +    A             +  +    +   +N++ +  +
Sbjct: 68  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEM 127

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA 157
            +  K      K              G  A  + +    Y+              A+  A
Sbjct: 128 TKKVKPHLVASK---GEIVNVSSIVAGPQAQPDFL----YYAIAKAALDQYTRSTAIDLA 180

Query: 158 SEGLPIVPVYPGVIYGP 174
             G+ +  V PG++   
Sbjct: 181 KFGIRVNSVSPGMVETG 197

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	209
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.97
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.96
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.96
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.96
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.96
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.96
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.96
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.95
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.95
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.95
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.95
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.95
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.95
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.95
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.95
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.95
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.95
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.95
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.95
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.95
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.95
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.95
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.95
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.95
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.95
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.94
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.94
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.94
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.94
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.94
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.94
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.94
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.94
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.94
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.94
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.94
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.94
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.94
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.93
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.93
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.93
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.93
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.93
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.93
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.93
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.93
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.93
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.93
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.92
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.92
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.92
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.91
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.91
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.91
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.9
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.9
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.9
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.9
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.9
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.9
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.89
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.88
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.88
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.88
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.87
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.86
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.85
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.85
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.82
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.81
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.8
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.79
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.78
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.77
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.74
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.48
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.92
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.87
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.76
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.69
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.66
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.65
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.54
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.52
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.46
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.46
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.46
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.45
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.44
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.43
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.38
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.33
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.33
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	98.32
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	98.3
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.26
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.25
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.23
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.17
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.17
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.1
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.04
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.02
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.93
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.93
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.88
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.87
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.85
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.83
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.77
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.76
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.73
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.72
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.72
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.69
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.65
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.59
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.55
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.52
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.5
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.5
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.5
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.49
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.48
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.46
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.43
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.42
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.42
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.36
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.36
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.34
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.31
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.3
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.22
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.15
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.1
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.05
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	97.05
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	97.0
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.94
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.93
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.91
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.9
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.87
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.82
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.79
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.78
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.77
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.76
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.73
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.64
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.62
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.62
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.57
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.5
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.42
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.41
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.33
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.3
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.28
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.26
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.26
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.24
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.21
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.2
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.18
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.18
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.16
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.14
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.14
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.13
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.13
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.13
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.1
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.09
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.08
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.08
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.05
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.04
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.0
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.0
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.98
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.98
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.97
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.9
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.84
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.84
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.79
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.79
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.79
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.78
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.77
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.75
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.75
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.74
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.66
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.66
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.65
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.61
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	95.61
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.58
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.46
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.41
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	95.39
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.37
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.34
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.33
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.23
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.2
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.13
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.02
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.91
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.9
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.9
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.8
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.8
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.75
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.73
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.69
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	94.61
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.59
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	94.54
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.5
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	94.5
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.46
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	94.45
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	94.39
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.23
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	94.1
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.86
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.82
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	93.7
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.68
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	93.65
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	93.52
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.49
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.49
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.32
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.29
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.22
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.19
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	93.15
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.03
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.98
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.96
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	92.94
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	92.84
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.68
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.66
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.65
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.34
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.25
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.24
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.23
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	92.13
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.97
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.42
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.37
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.11
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	91.09
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	90.86
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	90.81
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.4
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.38
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.35
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.26
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	89.66
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.65
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	89.56
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	89.48
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.13
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.12
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	88.98
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.95
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.91
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.88
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.54
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	88.52
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	88.49
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	88.4
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	88.28
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.03
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.7
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.4
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	87.26
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	86.76
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	86.66
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.66
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	86.26
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	86.1
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	86.09
d1sbza_	186	Probable aromatic acid decarboxylase Pad1 {Escheri	85.64
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.55
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.1
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.05
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.0
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.66
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.1
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	83.99
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	83.66
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	83.65
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	83.5
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	83.49
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.35
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	83.32
d1weka_	208	Hypothetical protein TT1465 (TTHA1644) {Thermus th	82.85
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	82.37
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	82.2
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	82.03
d1t0ia_	185	Hypothetical protein Ylr011wp {Baker's yeast (Sacc	81.69
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.51
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	81.35
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	81.06
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.58
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.13

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.2e-36  Score=240.84  Aligned_cols=206  Identities=16%  Similarity=0.137  Sum_probs=159.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-----CCCCC-----CCCCceEEEEccCCCHHHHHHHhcC--cCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-----DISGL-----PSEGALELVYGDVTDYRSLVDACFG--CHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-----~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   68 (209)
                      +++||||||||||++|+++|+++|++|++++|...     +.+.+     ....+++++++|++|.+++.+++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            36889999999999999999999999999998532     11111     1125799999999999999999985  599


Q ss_pred             EEEcCccCC--CCCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           69 IFHTAALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        69 vi~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |+|+|+...  .+..++..++++|+.+|.+|++++++..  +..+|||+||..+||.....+.+|+.+..   |.++|+.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~---P~~~Y~~  158 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFY---PRSPYAV  158 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCC---CCSHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCC---CCChHHH
Confidence            999999753  3457788899999999999999998763  33589999999999977666777766443   3578999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC--cchhHHHHHHHHhc----------CCceEEEEEEeeeeecC
Q 028444          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLFS----------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       145 sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~~~~dva~~i  209 (209)
                      +|.++|.+++.+.+ .+++++++||+.+|||+...  ....+...+.....          ++....|+|++|+|+++
T Consensus       159 sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~  236 (357)
T d1db3a_         159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ  236 (357)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence            99999999999874 58999999999999996532  12344444444433          33444689999999863

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.5e-35  Score=237.60  Aligned_cols=208  Identities=18%  Similarity=0.230  Sum_probs=161.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEE-EEcCCCC-----CCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~-~~r~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |||||||||||||++|+++|+++|++|++ +++....     ...+....+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            99999999999999999999999987555 4432211     2223334689999999999999999886  58999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcC--------CccEEEEEccceeeccCCccccCCCcc-------ccc
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFALGSTDGYIADENQV-------HEE  135 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~i~~ss~~~~~~~~~~~~~e~~~-------~~~  135 (209)
                      |+....  +..++..++++|+.++.+++++|++..        +.++||++||..+||.....+..+...       ..+
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            996432  335778899999999999999997652        235899999999999765443333211       112


Q ss_pred             cccCChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce---------EEEEEEeee
Q 028444          136 KYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS---------LVFFHCQIT  205 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dv  205 (209)
                      ..|.+.|+.+|.++|.+++.+.+ .+++++++||+.+|||+... ..+++.++..+..+++.         +.|+|++|+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc-CcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            23557899999999999999874 59999999999999998743 35778888877766543         458999999


Q ss_pred             eecC
Q 028444          206 CHAI  209 (209)
Q Consensus       206 a~~i  209 (209)
                      |+++
T Consensus       240 a~ai  243 (361)
T d1kewa_         240 ARAL  243 (361)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9874

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.3e-35  Score=235.72  Aligned_cols=204  Identities=25%  Similarity=0.313  Sum_probs=163.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEE------EEcCCC-----CCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRA------LVRRTS-----DISGLPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~------~~r~~~-----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||||||||||||++++++|+++|++|..      +++...     .........+++++.+|+++..........+|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            99999999999999999999999986544      332211     1112223357999999999999999988999999


Q ss_pred             EEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        70 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      +|+|+....  ...++.+.+++|+.++.++++++.+. ++++|||+||..+|++....+.+|+.+..   |.+.|+.+|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~---p~~~Y~~sK~  156 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGSWTESSPLE---PNSPYAASKA  156 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSCBCTTSCCC---CCSHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceeecCCCCCCCCCCCCCC---CCCHHHHHHH
Confidence            999986422  33566788999999999999999988 47899999999999987766666665443   3478999999


Q ss_pred             HHHHHHHHHh-hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC---------ceEEEEEEeeeeecC
Q 028444          148 VADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH---------FSLVFFHCQITCHAI  209 (209)
Q Consensus       148 ~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i  209 (209)
                      ++|.+++.+. +.+++++++||+.+|||++.. ..+++.++.....++         +...|+|++|+|+++
T Consensus       157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai  227 (322)
T d1r6da_         157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI  227 (322)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc-CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHH
Confidence            9999999987 459999999999999998754 467888888776554         334689999999864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=234.51  Aligned_cols=202  Identities=19%  Similarity=0.277  Sum_probs=155.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCC---CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      +||||||||||||++++++|+++|++|++++|.. .+.+.+   .....+++...|+.     ..++.++|+|||+|+..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~~~d~VihlAa~~   76 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV-----EPLYIEVDQIYHLASPA   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT-----SCCCCCCSEEEECCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHH-----HHHHcCCCEEEECcccC
Confidence            4899999999999999999999999999998743 222221   22234555555554     34567899999999975


Q ss_pred             CC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcccc--ccccCChHHHHHHHHHHH
Q 028444           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE--EKYFCTQYERSKAVADKI  152 (209)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~--~~~~~~~Y~~sK~~~e~~  152 (209)
                      ..  +..++.+.+++|+.++.+|++++++..  .++||+||..+|+.....+.+|+....  +..|.+.|+.+|.++|.+
T Consensus        77 ~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~  154 (312)
T d2b69a1          77 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  154 (312)
T ss_dssp             SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CchhHHhCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence            32  346788899999999999999999874  389999999999976655665544322  233557899999999999


Q ss_pred             HHHHh-hcCCCEEEEecCceecCCCCCc-chhHHHHHHHHhcCCc---------eEEEEEEeeeeecC
Q 028444          153 ALQAA-SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLVRLLFSQHF---------SLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~-~~~~~~~~~rp~~v~g~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~i  209 (209)
                      ++.+. ..+++++++||+.+|||+.... ..+++.++.....++.         ...|+|++|+|+++
T Consensus       155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~  222 (312)
T d2b69a1         155 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL  222 (312)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHH
Confidence            99986 4599999999999999986432 4578888888765554         34689999999863

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-34  Score=230.09  Aligned_cols=205  Identities=21%  Similarity=0.295  Sum_probs=157.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-CC-----CCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LP-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~-----~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      |||||||||||||++|+++|+++|++|++++|-...... ..     ...+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            999999999999999999999999999999874322111 00     11479999999999999999987  79999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e  150 (209)
                      |+....  +..++.+.+++|+.++.+++++|++. +++++|++||..+|+.....+..|...  ...+.++|+.+|..+|
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy~~~~~~~~~e~~~--~~~p~~~Y~~sK~~~e  157 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPKIPYVESFP--TGTPQSPYGKSKLMVE  157 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSC--CCCCSSHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEEccccccccccccc--cCCCcchHHHHHhhhh
Confidence            996432  33567789999999999999999998 589999999999998665444443322  2234578999999999


Q ss_pred             HHHHHHh-h-cCCCEEEEecCceecCCCCC---------cchhHHHHHHHHhcCC----------------ceEEEEEEe
Q 028444          151 KIALQAA-S-EGLPIVPVYPGVIYGPGKLT---------TGNLVAKLVRLLFSQH----------------FSLVFFHCQ  203 (209)
Q Consensus       151 ~~~~~~~-~-~~~~~~~~rp~~v~g~~~~~---------~~~~~~~~~~~~~~~~----------------~~~~~~~~~  203 (209)
                      .++..+. + .+++++++||+++|||+...         ...+++.++.....+.                ....|+|++
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~  237 (338)
T d1udca_         158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM  237 (338)
T ss_dssp             HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred             HHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEe
Confidence            9988754 3 37899999999999986421         1235666666554432                234588999


Q ss_pred             eeeec
Q 028444          204 ITCHA  208 (209)
Q Consensus       204 dva~~  208 (209)
                      |++.+
T Consensus       238 D~~~~  242 (338)
T d1udca_         238 DLADG  242 (338)
T ss_dssp             HHHHH
T ss_pred             ehhhh
Confidence            98754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-33  Score=223.28  Aligned_cols=206  Identities=21%  Similarity=0.186  Sum_probs=156.8

Q ss_pred             CEE-EEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-----CCC------CCCCceEEEEccCCCHHHHHHHhc--Cc
Q 028444            1 MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGL------PSEGALELVYGDVTDYRSLVDACF--GC   66 (209)
Q Consensus         1 m~i-lItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~------~~~~~~~~~~~Dl~~~~~~~~~~~--~~   66 (209)
                      +|| ||||||||||++|+++|+++|++|++++|.....     +.+      ....+++++++|++|.+.+.+++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            478 9999999999999999999999999999964321     111      111468999999999999999886  57


Q ss_pred             CEEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           67 HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        67 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ++++|+|+....  ...++..++++|+.++.++++++++..  +..+|||+||..+||.....+.+|+.+..   |.++|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~---P~~~Y  157 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFY---PRSPY  157 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCC---CCSHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCC---CCCHH
Confidence            799999885422  234566778999999999999999874  23589999999999977666677765443   35789


Q ss_pred             HHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhc---------CCceEEEEEEeeeeecC
Q 028444          143 ERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFS---------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       143 ~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~i  209 (209)
                      +.+|.++|++++.+. +.+++++++||+.+|||+....   ......++.....         ++....|+|++|+|+++
T Consensus       158 g~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~  237 (347)
T d1t2aa_         158 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM  237 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHH
Confidence            999999999999976 4689999999999999965322   1233333333332         33445689999999864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.2e-33  Score=223.36  Aligned_cols=206  Identities=16%  Similarity=0.113  Sum_probs=158.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC--
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~--   78 (209)
                      |||||||||||||++|+++|+++|++|++++|.+..... ......++..+|+.+.+.+..+++++|+|||+|+....  
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~   94 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMG   94 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccccc
Confidence            899999999999999999999999999999876543211 11135788999999999999999999999999986433  


Q ss_pred             -CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccc----cccccCChHHHHHHHHHHHH
Q 028444           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~e~~~  153 (209)
                       ....+...+..|+.++.++++++++. ++++||++||..+|+.....+.++....    .+..|.+.|+.+|.++|.++
T Consensus        95 ~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~  173 (363)
T d2c5aa1          95 FIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC  173 (363)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhHHHHhHHhh-CccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHH
Confidence             24567788999999999999999998 5899999999999987665554443321    12335578999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCc---chhHHHHH-HHHhc---------CCceEEEEEEeeeeec
Q 028444          154 LQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLV-RLLFS---------QHFSLVFFHCQITCHA  208 (209)
Q Consensus       154 ~~~~~-~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~-~~~~~---------~~~~~~~~~~~dva~~  208 (209)
                      +.+.+ .+++++++||+.+|||++...   ........ .....         |.+...|+|++|+|++
T Consensus       174 ~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~  242 (363)
T d2c5aa1         174 KHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG  242 (363)
T ss_dssp             HHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred             HHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHH
Confidence            98864 599999999999999976321   11222222 22222         3345568999999875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-33  Score=223.18  Aligned_cols=207  Identities=21%  Similarity=0.318  Sum_probs=161.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHH-HhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-ACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~vi~~a~~~~~   78 (209)
                      |||||||||||||++++++|+++| ++|+++++.......+....+++++++|+++.+++.+ +.+++|+|||+|+....
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            999999999999999999999999 6899998876554444445689999999998766655 66789999999997533


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcc----ccccccCChHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV----HEEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~----~~~~~~~~~Y~~sK~~~e~~  152 (209)
                        ...++...++.|+.++.++++++.+..  .+++++||..+|+.......++...    .+...|.+.|+.+|.++|.+
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~  158 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  158 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred             cccccCCcccccccccccccccccccccc--ccccccccccccccccccccccccccccccccCCCcchhhhcccchhhh
Confidence              334567789999999999999999874  4667889999998766544443321    22333456799999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-------cchhHHHHHHHHhcC---------CceEEEEEEeeeeecC
Q 028444          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-------TGNLVAKLVRLLFSQ---------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~~-~~~~~~~~rp~~v~g~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~i  209 (209)
                      +..+.+ .+++++++||+.+|||....       ....+..++..++.|         +....|+|++|+|+++
T Consensus       159 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~  232 (342)
T d2blla1         159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (342)
T ss_dssp             HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             hhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccccee
Confidence            998864 59999999999999985421       234567777776554         4556799999999864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=8.1e-33  Score=220.98  Aligned_cols=204  Identities=22%  Similarity=0.297  Sum_probs=164.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC----------CCCCCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----------GLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~----------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      ++|||||||||||++|+++|+++|++|++++|......          .......++++.+|+.|...........+.++
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~v~   96 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVL   96 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccccc
Confidence            37999999999999999999999999999987332110          00011468999999999999999989999999


Q ss_pred             EcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHH
Q 028444           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (209)
Q Consensus        71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (209)
                      |+++....  +..++...+++|+.++.+|+++|.+. +.++|||+||..+||.....+.+|+.+..   |.+.|+.+|.+
T Consensus        97 ~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~---p~~~Y~~sK~~  172 (341)
T d1sb8a_          97 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIGK---PLSPYAVTKYV  172 (341)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCC---CCSHHHHHHHH
T ss_pred             cccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceeeCCCCCCCccCCCCCC---CCCcchHHHHH
Confidence            99986422  34567789999999999999999988 47899999999999987777777766543   34789999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCCc---------eEEEEEEeeeeec
Q 028444          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQHF---------SLVFFHCQITCHA  208 (209)
Q Consensus       149 ~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~  208 (209)
                      +|.+++.+.+ .+++++++||+.+|||+....   ..++..++..++.|++         ...|+|++|+|++
T Consensus       173 ~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a  245 (341)
T d1sb8a_         173 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA  245 (341)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchh
Confidence            9999988874 589999999999999975322   3567777777775553         3457999999876

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.9e-32  Score=219.32  Aligned_cols=206  Identities=19%  Similarity=0.232  Sum_probs=154.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC----CCCCC--CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----DISGL--PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~----~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |||||||||||||++|+++|+++|++|.++.++..    .....  ....+++++.+|++|.+.+..++.+.|.|+|+|+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~   82 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhhh
Confidence            79999999999999999999999987666654321    11111  1124899999999999999999999999999998


Q ss_pred             cCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCcc---c------cCCCccccccccCChHH
Q 028444           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY---I------ADENQVHEEKYFCTQYE  143 (209)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~---~------~~e~~~~~~~~~~~~Y~  143 (209)
                      ....  +..++.+.+++|+.++.++++++....  .++|++||..+|+.....   +      .+......+..|.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          83 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            6433  335778899999999999999999884  589999999999753210   0      00001111223457899


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCcchhHHHHHHHHhc---------CCceEEEEEEeeeeecC
Q 028444          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFS---------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       144 ~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~i  209 (209)
                      .+|.++|.+++.+.+ .+++++++||+.+|||+... ...+...+.....         ++....|+|++|+|+++
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~-~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~  235 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV  235 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCc-cchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence            999999999998864 58999999999999997643 3445555555443         34445689999999863

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.6e-32  Score=215.17  Aligned_cols=206  Identities=21%  Similarity=0.137  Sum_probs=159.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a   73 (209)
                      ++|||||||||||++|+++|+++||+|++++|......     .+....+++++++|++|.+.+.+.+.  ..++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            58999999999999999999999999999998754321     12223579999999999999988776  467888888


Q ss_pred             ccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHH
Q 028444           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      +....  ...++...++.|+.++.++++++++....++|++.||..+|+.......+|+.+..   +.+.|+.+|.++|.
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~---p~~~Y~~sK~~~E~  157 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY---PRSPYGVAKLYGHW  157 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC---CCSHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcc---ccChhHHHHHHHHH
Confidence            76432  34567788999999999999999998666789999999888877666666655443   34789999999999


Q ss_pred             HHHHHh-hcCCCEEEEecCceecCCCCCc--chhHHHHHHHHhc----------CCceEEEEEEeeeeecC
Q 028444          152 IALQAA-SEGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFS----------QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       152 ~~~~~~-~~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~dva~~i  209 (209)
                      ++..+. +.+++++++||+.+|||.....  ...+...+.+...          +++...|+|++|+|+++
T Consensus       158 ~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~  228 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM  228 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHH
Confidence            999886 5689999999999999964322  2234444444332          23334689999999863

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.6e-31  Score=217.28  Aligned_cols=208  Identities=18%  Similarity=0.176  Sum_probs=153.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc----------CCCCCCCCCC------------CCceEEEEccCCCHHH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR----------RTSDISGLPS------------EGALELVYGDVTDYRS   58 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r----------~~~~~~~~~~------------~~~~~~~~~Dl~~~~~   58 (209)
                      |||||||||||||++|+++|+++||+|++++.          ..........            ..+++++++|++|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            89999999999999999999999999999862          1111111111            1368999999999999


Q ss_pred             HHHHhc--CcCEEEEcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCc
Q 028444           59 LVDACF--GCHVIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ  131 (209)
Q Consensus        59 ~~~~~~--~~d~vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~  131 (209)
                      +.++++  ++|+|+|+|+....     ....+..+++.|+.++.++++++++.....++++.||..+|+.... +.++..
T Consensus        82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~  160 (393)
T d1i24a_          82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGY  160 (393)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSE
T ss_pred             HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-cccccc
Confidence            999987  47999999986422     1123456789999999999999999865567889998888865432 111111


Q ss_pred             -----------cccccccCChHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCCc----------------chhH
Q 028444          132 -----------VHEEKYFCTQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTT----------------GNLV  183 (209)
Q Consensus       132 -----------~~~~~~~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~----------------~~~~  183 (209)
                                 ...+..|.+.|+.+|.++|.+++.+. +.+++++++||+.+|||+....                ..++
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL  240 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence                       11123345789999999999998876 5699999999999999965321                1245


Q ss_pred             HHHHHHHhcC---------CceEEEEEEeeeeecC
Q 028444          184 AKLVRLLFSQ---------HFSLVFFHCQITCHAI  209 (209)
Q Consensus       184 ~~~~~~~~~~---------~~~~~~~~~~dva~~i  209 (209)
                      ..++.....+         .+...|+|++|+|+++
T Consensus       241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~  275 (393)
T d1i24a_         241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV  275 (393)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred             hhhhHHhhcCCeeEEeeecccccccccccchHHHH
Confidence            6666665543         4456799999998763

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.5e-31  Score=211.12  Aligned_cols=192  Identities=19%  Similarity=0.209  Sum_probs=145.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      +||||||||||||++|+++|+++|+.|+++++...               .|+.|.+.+.++++  ++|+|+|+|+....
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~   67 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG   67 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence            48999999999999999999999999887644321               38999999988875  58999999986432


Q ss_pred             ---CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcccc--ccccCChHHHHHHHHHHHH
Q 028444           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE--EKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~--~~~~~~~Y~~sK~~~e~~~  153 (209)
                         ...++.++++.|+.++.+|++++.+. ++++|||+||..+|++....+.+|+.+..  +..+.++|+.+|.++|+++
T Consensus        68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_          68 IVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence               23455677899999999999999988 58899999999999987666666654322  2223457999999999999


Q ss_pred             HHHh-hcCCCEEEEecCceecCCCCCc---chhHHHH-----HHHHhc---------CCceEEEEEEeeeeec
Q 028444          154 LQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKL-----VRLLFS---------QHFSLVFFHCQITCHA  208 (209)
Q Consensus       154 ~~~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~-----~~~~~~---------~~~~~~~~~~~dva~~  208 (209)
                      +.+. +.|++++++||+++|||++...   ......+     ......         +.+...|+|++|++++
T Consensus       147 ~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~  219 (315)
T d1e6ua_         147 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  219 (315)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHH
Confidence            9987 4599999999999999976321   1222222     122222         3445678899998865

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.97  E-value=2.5e-30  Score=209.51  Aligned_cols=176  Identities=23%  Similarity=0.297  Sum_probs=134.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHh-CCCeEEEEEcCCC---CCC-------------------CCCCCCceEEEEccCCCHH
Q 028444            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRRTS---DIS-------------------GLPSEGALELVYGDVTDYR   57 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~r~~~---~~~-------------------~~~~~~~~~~~~~Dl~~~~   57 (209)
                      |||||||||||||++|+++|++ .|++|+++++-..   ...                   .........++++|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            9999999999999999999985 6899999975111   000                   0011136889999999999


Q ss_pred             HHHHHhc---CcCEEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccC-CCc
Q 028444           58 SLVDACF---GCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD-ENQ  131 (209)
Q Consensus        58 ~~~~~~~---~~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~-e~~  131 (209)
                      .+.++++   ++|+|+|+|+....  ...++...++.|+.++.++++++++. ++++++++||..+|+........ +..
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccccccccccccccccccccccc
Confidence            9988875   57999999996432  22456678899999999999999988 57899999999888764432211 111


Q ss_pred             c---ccccccCChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCC
Q 028444          132 V---HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL  177 (209)
Q Consensus       132 ~---~~~~~~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~  177 (209)
                      +   .....|.+.|+.+|.++|.+++.+.+ ++++++++||+.+|||+..
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTT
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcc
Confidence            1   11223457899999999999999874 6999999999999999764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.5e-30  Score=205.25  Aligned_cols=204  Identities=19%  Similarity=0.245  Sum_probs=153.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC---CC---------CCCceEEEEccCCCHHHHHHHhcC--cC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---LP---------SEGALELVYGDVTDYRSLVDACFG--CH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~---------~~~~~~~~~~Dl~~~~~~~~~~~~--~d   67 (209)
                      ||||||||||||++|+++|+++|++|++++|.......   ..         ...++.++++|++|.+.+.+++.+  ++
T Consensus         4 KILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~   83 (346)
T d1ek6a_           4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFM   83 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccc
Confidence            79999999999999999999999999999863221111   00         114789999999999999998764  56


Q ss_pred             EEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        68 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      +++|+|+....  +..++.++++.|+.++.++++++++. ++++||++||..+|+.......++..  +...+.++|+.+
T Consensus        84 ~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~~~~~~~~~~~~~--~~~~~~~~Y~~~  160 (346)
T d1ek6a_          84 AVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYLPLDEAH--PTGGCTNPYGKS  160 (346)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSSSBCTTS--CCCCCSSHHHHH
T ss_pred             cccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceeeeccccccccccc--cccccCChHHHH
Confidence            89999997532  33467888999999999999999988 57899999999999875533332222  222334789999


Q ss_pred             HHHHHHHHHHHhh--cCCCEEEEecCceecCCCCC---------cchhHHHHHHHHhcCC----------------ceEE
Q 028444          146 KAVADKIALQAAS--EGLPIVPVYPGVIYGPGKLT---------TGNLVAKLVRLLFSQH----------------FSLV  198 (209)
Q Consensus       146 K~~~e~~~~~~~~--~~~~~~~~rp~~v~g~~~~~---------~~~~~~~~~~~~~~~~----------------~~~~  198 (209)
                      |..+|..+..+.+  .+++.+++||+.+|||....         ...+++.++.......                ....
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd  240 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence            9999999888753  48999999999999986421         1234555555444322                2345


Q ss_pred             EEEEeeeeec
Q 028444          199 FFHCQITCHA  208 (209)
Q Consensus       199 ~~~~~dva~~  208 (209)
                      |+|++|+|++
T Consensus       241 fi~v~D~a~~  250 (346)
T d1ek6a_         241 YIHVVDLAKG  250 (346)
T ss_dssp             EEEHHHHHHH
T ss_pred             EEEEEeccch
Confidence            8999999864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.6e-30  Score=208.15  Aligned_cols=172  Identities=16%  Similarity=0.189  Sum_probs=136.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-C-----CCCCceEEEEccCCCHHHHHHHhc--CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-L-----PSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~   72 (209)
                      +.|||||||||||++|+++|+++|++|+++++....... .     ....+++++++|++|.+.+..++.  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            369999999999999999999999999999864332110 0     011478999999999999999876  79999999


Q ss_pred             CccCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccc----cCCCccccccccCChHHHHH
Q 028444           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI----ADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~----~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      |+....  ...++..++.+|+.++.++++++++. ++++||++||..+|+.....+    .+|+.+   ..|.+.|+.+|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~---~~p~~~Y~~sK  157 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECP---LGPTNPYGHTK  157 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC---CCCCSHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeeecCcccCCCCCccccccC---CCCCChhHhHH
Confidence            997532  33466778999999999999999988 578999999999998755432    233222   23447899999


Q ss_pred             HHHHHHHHHHhh---cCCCEEEEecCceecCCC
Q 028444          147 AVADKIALQAAS---EGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       147 ~~~e~~~~~~~~---~~~~~~~~rp~~v~g~~~  176 (209)
                      .++|.+++++.+   .+++++++||+.+||+..
T Consensus       158 ~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~  190 (347)
T d1z45a2         158 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHP  190 (347)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHHHHHhhccCCcEEEEeecceEeecC
Confidence            999999988753   478999999999999754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=8.1e-30  Score=202.89  Aligned_cols=205  Identities=20%  Similarity=0.147  Sum_probs=151.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-----CCCCC------CCCceEEEEccCCCHHHHHHHhc--CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLP------SEGALELVYGDVTDYRSLVDACF--GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-----~~~~~------~~~~~~~~~~Dl~~~~~~~~~~~--~~d   67 (209)
                      +++||||||||||++|+++|+++||+|++++|....     ...+.      ....++++.+|+++.+.+.+.++  ++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            479999999999999999999999999999995431     11111      11468899999999999998875  679


Q ss_pred             EEEEcCccCCC--CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        68 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      +|||+|+....  ...++...++.|+.++.+++++++...    ...++++.||..+|+.... ..+|+.+.   .|.+.
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~-~~~E~~~~---~p~~~  157 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPF---HPRSP  157 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCC---CCCSH
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCC-CCCCCCCC---CCcch
Confidence            99999997433  235777889999999999999987531    2346888888877765543 34454433   24578


Q ss_pred             HHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--chhHHHHHHHHhc----------CCceEEEEEEeeeeec
Q 028444          142 YERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLVRLLFS----------QHFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~~~e~~~~~~~~-~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~dva~~  208 (209)
                      |+.+|.++|.++..+.+ .+++++++||+++|||.....  ...+...+.....          +.....|+|++|+|++
T Consensus       158 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~  237 (339)
T d1n7ha_         158 YAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEA  237 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHH
Confidence            99999999999988874 599999999999999975321  2223333333221          3345568999999876


Q ss_pred             C
Q 028444          209 I  209 (209)
Q Consensus       209 i  209 (209)
                      +
T Consensus       238 ~  238 (339)
T d1n7ha_         238 M  238 (339)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=2.6e-30  Score=206.54  Aligned_cols=207  Identities=20%  Similarity=0.197  Sum_probs=152.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      .+|||||||||||++|+++|+++|++|+++.|+..+...+       ........+.+|++|.+.+.+++.++|+|+|+|
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a   91 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIA   91 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhhc
Confidence            3799999999999999999999999999999975432111       011234567899999999999999999999999


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeecc-CC---ccccCCCcc-------------cccc
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS-TD---GYIADENQV-------------HEEK  136 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~-~~---~~~~~e~~~-------------~~~~  136 (209)
                      +.... ..++...++.|+.++.+++++|.+..++++||++||+.++.. .+   ....+|..+             ..+.
T Consensus        92 ~~~~~-~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~  170 (342)
T d1y1pa1          92 SVVSF-SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQ  170 (342)
T ss_dssp             CCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTT
T ss_pred             ccccc-cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCC
Confidence            97543 345667889999999999999998766899999999765432 11   122222211             1122


Q ss_pred             ccCChHHHHHHHHHHHHHHHhh-c--CCCEEEEecCceecCCCCC--cchhHHHHHHHHhcCC--------ceEEEEEEe
Q 028444          137 YFCTQYERSKAVADKIALQAAS-E--GLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLFSQH--------FSLVFFHCQ  203 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~-~--~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~  203 (209)
                      .+.++|+.+|..+|.+++.|.+ +  ++++++++|+.+|||....  ....+..+++.++.++        ....|+|++
T Consensus       171 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~  250 (342)
T d1y1pa1         171 KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHH
T ss_pred             CCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHH
Confidence            2346799999999999988764 2  5788999999999985421  2234555666555443        445799999


Q ss_pred             eeeec
Q 028444          204 ITCHA  208 (209)
Q Consensus       204 dva~~  208 (209)
                      |+|++
T Consensus       251 Dva~~  255 (342)
T d1y1pa1         251 DIGLL  255 (342)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.96  E-value=5.3e-29  Score=199.37  Aligned_cols=205  Identities=19%  Similarity=0.269  Sum_probs=157.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~   74 (209)
                      |||||||||||||+++++.|+++|++|++++|+..+...    .....+++++++|++|++.+.++++  .+|+|+|+|+
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa   88 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   88 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhhc
Confidence            689999999999999999999999999999998664432    1112479999999999999998886  5799999999


Q ss_pred             cCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCC-ccccCCCccccccccCChHHHHHHHHHH
Q 028444           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADK  151 (209)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~e~  151 (209)
                      ....  ...++...+++|+.++.++++++++......+++.||..++.... ..+.+++.+.   .|.++|+.+|...|.
T Consensus        89 ~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~p~~~y~~~k~~~e~  165 (356)
T d1rkxa_          89 QPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM---GGYDPYSNSKGCAEL  165 (356)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB---CCSSHHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccccccc---CCCCccccccccchh
Confidence            6433  335678899999999999999999886566777777766665433 2333333322   234779999999988


Q ss_pred             HHHHHh----------hcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCc--------eEEEEEEeeeeec
Q 028444          152 IALQAA----------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHF--------SLVFFHCQITCHA  208 (209)
Q Consensus       152 ~~~~~~----------~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~dva~~  208 (209)
                      ....+.          +.++.++++||+.+|||++.....+++.+++....+..        ...++|++|+|.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a  240 (356)
T d1rkxa_         166 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG  240 (356)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred             hhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccch
Confidence            776643          23678999999999999886666777877777665443        3457899999876

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.5e-29  Score=184.92  Aligned_cols=180  Identities=21%  Similarity=0.163  Sum_probs=137.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~   81 (209)
                      ||+||||||+||++++++|+++|++|+++.|++.+...... .+++++.+|++|.+++.++++++|+|||++|...+   
T Consensus         5 kIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~---   80 (205)
T d1hdoa_           5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND---   80 (205)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-cccccccccccchhhHHHHhcCCCEEEEEeccCCc---
Confidence            89999999999999999999999999999998877654433 47999999999999999999999999999986322   


Q ss_pred             CccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhhcCC
Q 028444           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGL  161 (209)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~  161 (209)
                        ....+++..++.++++++++. ++++||++||..+|.+....+.          ....|...|..+|++++   +.++
T Consensus        81 --~~~~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~~~~~----------~~~~~~~~~~~~e~~l~---~~~~  144 (205)
T d1hdoa_          81 --LSPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLR---ESGL  144 (205)
T ss_dssp             --CSCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCSCG----------GGHHHHHHHHHHHHHHH---HTCS
T ss_pred             --hhhhhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCccccc----------cccccchHHHHHHHHHH---hcCC
Confidence              222357788999999999988 5899999999887765432211          01347788888887664   4689


Q ss_pred             CEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          162 PIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       162 ~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      +++++||+++++........       ....+..+..+++++|+|++
T Consensus       145 ~~tiirp~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~DvA~~  184 (205)
T d1hdoa_         145 KYVAVMPPHIGDQPLTGAYT-------VTLDGRGPSRVISKHDLGHF  184 (205)
T ss_dssp             EEEEECCSEEECCCCCSCCE-------EESSSCSSCSEEEHHHHHHH
T ss_pred             ceEEEecceecCCCCcccEE-------EeeCCCCCCCcCCHHHHHHH
Confidence            99999999998643321111       11235555667788887764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=5.7e-30  Score=194.52  Aligned_cols=154  Identities=25%  Similarity=0.253  Sum_probs=122.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +++|||||+++||++++++|+++|++|++++|+.+..+      ++..+++|++|++++.++++       ++|++||||
T Consensus         8 K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   81 (237)
T d1uzma1           8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   81 (237)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeee
Confidence            37999999999999999999999999999999876543      56789999999999877764       589999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |...+      ..++|++++++|+.++..+++.+.+.+   +..++|++||...+.+..+.              ..|+.
T Consensus        82 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~--------------~~Y~a  147 (237)
T d1uzma1          82 GLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--------------ANYAA  147 (237)
T ss_dssp             SCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC--------------HHHHH
T ss_pred             cccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCccc--------------HHHHH
Confidence            96422      335678899999999999998776542   34589999998766443222              34999


Q ss_pred             HHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      +|+    +++.+..++.++|++++++.||++.+|
T Consensus       148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~  181 (237)
T d1uzma1         148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTD  181 (237)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCCh
Confidence            999    555566666778999999999999987

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=3.6e-30  Score=196.27  Aligned_cols=189  Identities=21%  Similarity=0.137  Sum_probs=137.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a~   74 (209)
                      +++||||+++||++++++|+++|++|++.+|+.+++++..+..+.+++++|++|++++.++++       ++|++|||||
T Consensus         7 ~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG   86 (242)
T d1ulsa_           7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAG   86 (242)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCc
Confidence            599999999999999999999999999999987765544444478899999999999887764       5899999999


Q ss_pred             cCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC---ccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ...+      ..++|++.+++|+.++.++++++.+.+.   ...++++||.... +.++              ...|+.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~-~~~~--------------~~~Y~as  151 (242)
T d1ulsa_          87 ITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL-GNLG--------------QANYAAS  151 (242)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG-CCTT--------------CHHHHHH
T ss_pred             ccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc-CCCC--------------CcchHHH
Confidence            7432      3346788999999999999999877542   2356666664322 2111              1459999


Q ss_pred             HH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          146 KA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       146 K~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+    +++.++.+++++|++++.+.||++.+|......   ...........+...+..++|+|++
T Consensus       152 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~---~~~~~~~~~~~pl~R~~~pedia~~  215 (242)
T d1ulsa_         152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---EKVREKAIAATPLGRAGKPLEVAYA  215 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---HHHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC---HHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            99    555666667778999999999999998543222   2222233333333345556666543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=8.1e-31  Score=200.01  Aligned_cols=160  Identities=19%  Similarity=0.220  Sum_probs=128.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+++||++++++|+++|++|++.+|++++++++.++  .++..+++|++|++++.++++       ++|++||
T Consensus         5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   84 (243)
T d1q7ba_           5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVN   84 (243)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehh
Confidence            3699999999999999999999999999999987655433221  368889999999999877764       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||....      ..++|++.+++|+.++..+++++.+.+   +..+||++||...+.+.++.              ..|
T Consensus        85 nAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~--------------~~Y  150 (243)
T d1q7ba_          85 NAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ--------------ANY  150 (243)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC--------------HHH
T ss_pred             hhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC--------------HHH
Confidence            9996422      334677889999999999999987653   24689999998766443222              349


Q ss_pred             HHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      +.+|+    +++.++.+++++|++++.+.||.+.+|
T Consensus       151 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~  186 (243)
T d1q7ba_         151 AAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD  186 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecceEech
Confidence            99999    555566667778999999999999886

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=1.9e-30  Score=198.84  Aligned_cols=190  Identities=18%  Similarity=0.181  Sum_probs=137.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      .+|||||+++||++++++|+++|++|++.+|+.++++++.    . ..++.++++|++|++++.++++       ++|++
T Consensus        12 valITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   91 (251)
T d2c07a1          12 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDIL   91 (251)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceee
Confidence            6899999999999999999999999999999866443211    1 1368999999999999877764       68999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||+....      ..++|++.+++|+.++..+++++.+.+   +..+||++||...+.+.+..              .
T Consensus        92 vnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~--------------~  157 (251)
T d2c07a1          92 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ--------------A  157 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC--------------H
T ss_pred             eeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCC--------------H
Confidence            999996422      234678899999999999999886543   34689999998766443222              3


Q ss_pred             hHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .|+.+|+    +++.++.+++++|++++++.||++.+|.....   ..+..+.+....+...+..++|+|++
T Consensus       158 ~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~pl~R~~~pedvA~~  226 (251)
T d2c07a1         158 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIPAGRMGTPEEVANL  226 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            4999999    55556666677899999999999999854221   22333333433333445556666543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.95  E-value=1.9e-28  Score=194.42  Aligned_cols=207  Identities=24%  Similarity=0.315  Sum_probs=146.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCCCCceEEEEccCCCHHHHHHHhcC--cCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~   74 (209)
                      ||||||||||||++|+++|+++|++|+++++-.....     .+....+++++++|++|.+.+.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            8999999999999999999999999999875322111     111224799999999999999999875  699999999


Q ss_pred             cCCC--CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCc-------------cccccccC
Q 028444           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ-------------VHEEKYFC  139 (209)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~-------------~~~~~~~~  139 (209)
                      ....  ...++...+++|+.+|.+|++++.+....+++++.|+...++.....+..+..             ......+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            7533  23467889999999999999999998533445555555545443222111110             01112234


Q ss_pred             ChHHHHHHHHHHHHHHHh-hcCCCEEEEecCceecCCCCC--cchhHHHHHHHHh--------------cCCceEEEEEE
Q 028444          140 TQYERSKAVADKIALQAA-SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLVRLLF--------------SQHFSLVFFHC  202 (209)
Q Consensus       140 ~~Y~~sK~~~e~~~~~~~-~~~~~~~~~rp~~v~g~~~~~--~~~~~~~~~~~~~--------------~~~~~~~~~~~  202 (209)
                      +.|+.+|...|.+...+. ..+.....++++.+|++....  ....+..++...+              .|.....|+|+
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v  241 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA  241 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence            679999999999988865 568999999999999875422  1234444444432              23455678999


Q ss_pred             eeeeec
Q 028444          203 QITCHA  208 (209)
Q Consensus       203 ~dva~~  208 (209)
                      +|+|++
T Consensus       242 ~D~~~~  247 (338)
T d1orra_         242 EDMISL  247 (338)
T ss_dssp             HHHHHH
T ss_pred             cchhhH
Confidence            999876

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.6e-30  Score=197.85  Aligned_cols=194  Identities=15%  Similarity=0.103  Sum_probs=140.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      ++++||||+++||++++++|+++|++|++.+|+.++++.+.+ ..++.++++|++|+++++++++       ++|++|||
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnn   86 (250)
T d1ydea1           7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNN   86 (250)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEec
Confidence            469999999999999999999999999999998765443222 1468899999999999887764       58999999


Q ss_pred             CccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      ||....       ..++|++.+++|+.++.++++++.+.+.  ..++|++||...+.+.+..              ..|+
T Consensus        87 AG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~--------------~~Y~  152 (250)
T d1ydea1          87 AGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA--------------VPYV  152 (250)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC--------------HHHH
T ss_pred             ccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCc--------------chhH
Confidence            995321       2235778899999999999998876542  2589999998765443222              3599


Q ss_pred             HHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCC---cchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          144 RSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       144 ~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+|+    +++.++.+++++|++++.+.||++.+|....   ........++......+...+..++|+|++
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~  224 (250)
T d1ydea1         153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAA  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            9999    5666667777889999999999998863100   000112233333333444455666666654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.95  E-value=5.6e-30  Score=196.97  Aligned_cols=194  Identities=13%  Similarity=0.150  Sum_probs=139.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      ++++||||+++||++++++|+++|++|++.+|+.+++++.       ....++..+++|++|++++.++++       ++
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   84 (258)
T d1iy8a_           5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI   84 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            3699999999999999999999999999999987643321       112368899999999999877763       58


Q ss_pred             CEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        67 d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      |++|||||...+       +.++|++.+++|+.++.++++++.+.+   +..++|++||...+.+.+..           
T Consensus        85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-----------  153 (258)
T d1iy8a_          85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ-----------  153 (258)
T ss_dssp             SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB-----------
T ss_pred             CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCc-----------
Confidence            999999996421       234677899999999999999886543   34689999998765433222           


Q ss_pred             ccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCC-----cchhHHHHHHHHhcCCceEEEEEEeeeee
Q 028444          137 YFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLT-----TGNLVAKLVRLLFSQHFSLVFFHCQITCH  207 (209)
Q Consensus       137 ~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~dva~  207 (209)
                         ..|+.+|+    +++.++.+++++|++++.+.||++.+|....     ...........+....+...++.++|+|+
T Consensus       154 ---~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~  230 (258)
T d1iy8a_         154 ---SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAA  230 (258)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               45999999    6666677777889999999999998863100     00112223333343334444556666655


Q ss_pred             c
Q 028444          208 A  208 (209)
Q Consensus       208 ~  208 (209)
                      +
T Consensus       231 ~  231 (258)
T d1iy8a_         231 V  231 (258)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-29  Score=190.19  Aligned_cols=185  Identities=19%  Similarity=0.131  Sum_probs=141.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      |+|||||||||||++|+++|+++|+  +|++++|++.+.... ....+++..+|+.+.+.+.++++++|++||++|... 
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~-   92 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR-   92 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH-
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeecccccccccccccccccccccccccc-
Confidence            4799999999999999999999994  899999986543322 224788889999999999999999999999998532 


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHhh
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  158 (209)
                      ...++..+.++|+.++.+++++|.+. ++++||++||..++....                +.|+.+|..+|..+.+   
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~~~----------------~~Y~~~K~~~E~~l~~---  152 (232)
T d2bkaa1          93 GKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSSN----------------FLYLQVKGEVEAKVEE---  152 (232)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTCS----------------SHHHHHHHHHHHHHHT---
T ss_pred             cccchhhhhhhcccccceeeeccccc-CccccccCCccccccCcc----------------chhHHHHHHhhhcccc---
Confidence            12334567899999999999999987 589999999987764321                4599999999987655   


Q ss_pred             cCC-CEEEEecCceecCCCCCcchhHHHHHHHHhc----CCceEEEEEEeeeeecC
Q 028444          159 EGL-PIVPVYPGVIYGPGKLTTGNLVAKLVRLLFS----QHFSLVFFHCQITCHAI  209 (209)
Q Consensus       159 ~~~-~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dva~~i  209 (209)
                      .++ +++++|||.+||++...  .....+....+.    .......+|++|+|+++
T Consensus       153 ~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~  206 (232)
T d2bkaa1         153 LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAM  206 (232)
T ss_dssp             TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHH
T ss_pred             ccccceEEecCceeecCCCcC--cHHHHHHHHHhhccCCcccCCCeEEHHHHHHHH
Confidence            355 48999999999986532  222233333332    22233568999999863

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=3e-29  Score=192.15  Aligned_cols=193  Identities=17%  Similarity=0.069  Sum_probs=139.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+++||++++++|+++|++|++.+|+.+++++...      ..++.++++|++|++++.++++       ++|
T Consensus         6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   85 (251)
T d1vl8a_           6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD   85 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            369999999999999999999999999999998664432111      1368889999999999877763       589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceee-ccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~  137 (209)
                      ++|||||....      ..++|++.+++|+.++..+++++.+.+   +..++|++||.... .+..+.            
T Consensus        86 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~------------  153 (251)
T d1vl8a_          86 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI------------  153 (251)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSC------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccc------------
Confidence            99999996422      334677889999999999999987764   23589999986542 222111            


Q ss_pred             cCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                        ..|+.+|+    +++.+..+++++|++++.+.||++.+|...... .-++.........+...+..++|+|++
T Consensus       154 --~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~pl~R~~~pedvA~~  225 (251)
T d1vl8a_         154 --SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF-SDPEKLDYMLKRIPLGRTGVPEDLKGV  225 (251)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH-TCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             --cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc-CCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence              35999999    555566667778999999999999998531100 001223333333344455667777654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3.3e-30  Score=197.90  Aligned_cols=191  Identities=16%  Similarity=0.155  Sum_probs=138.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++||||+++||++++++|+++|++|++.+|+.++++++.+     ..++.++++|++|++++.++++       ++|++
T Consensus        13 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDil   92 (255)
T d1fmca_          13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDIL   92 (255)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEe
Confidence            69999999999999999999999999999998665432211     1468899999999998877663       68999


Q ss_pred             EEcCccCCC-----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           70 FHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        70 i~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      |||||...+     ..++|++.+++|+.++..+++++.+.+   +..++|++||...+.+.++.              ..
T Consensus        93 vnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~--------------~~  158 (255)
T d1fmca_          93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM--------------TS  158 (255)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC--------------HH
T ss_pred             eeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccc--------------cc
Confidence            999997422     234577889999999999999887653   23579999997665433222              35


Q ss_pred             HHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          142 YERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       142 Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |+.+|+    +++.++.+++++|++++++.||++.+|.....  .-++....+....+...+..++|+|++
T Consensus       159 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~e~~~~~~~~~pl~R~g~pedvA~~  227 (255)
T d1fmca_         159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPIRRLGQPQDIANA  227 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSSCSCBCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc--CCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            999999    55566666777899999999999988632110  012222333333334445666666654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=5.9e-30  Score=195.71  Aligned_cols=159  Identities=22%  Similarity=0.244  Sum_probs=126.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc-------CcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~a   73 (209)
                      +++|||||+++||++++++|+++|++|++.+|+++..+. .+..+..++++|++|++++.++++       ++|++||||
T Consensus         6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnA   84 (248)
T d2d1ya1           6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV-AEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNA   84 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH-HHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeC
Confidence            479999999999999999999999999999998654321 122356789999999998877664       589999999


Q ss_pred             ccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      |...+      ..++|++.+++|+.++.++++++.+.+   +..+||++||...+.+.++.              ..|+.
T Consensus        85 G~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~--------------~~Y~a  150 (248)
T d2d1ya1          85 AIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN--------------AAYNA  150 (248)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB--------------HHHHH
T ss_pred             cCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc--------------chhHH
Confidence            97422      334577899999999999999997653   23589999998765443222              34999


Q ss_pred             HHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      +|+    +++.++++++++|++++++.||.+.+|
T Consensus       151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  184 (248)
T d2d1ya1         151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE  184 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence            999    555666777778999999999999876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=7.3e-30  Score=194.55  Aligned_cols=160  Identities=24%  Similarity=0.288  Sum_probs=127.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~   76 (209)
                      +++|||||+++||++++++|+++|++|++++|+.++++++.+ ..++..+.+|++|+++++++++   ++|++|||||..
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~   85 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV   85 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccc
Confidence            479999999999999999999999999999998765433221 1468899999999999998886   589999999974


Q ss_pred             CC------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCccccccccCChHHHHH
Q 028444           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (209)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (209)
                      ..      ..++|++.+++|+.++.++++++.+.    ....++|++||...+.+.++.              ..|+.+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------------~~Y~asK  151 (242)
T d1cyda_          86 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL--------------ITYSSTK  151 (242)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB--------------HHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcc--------------ccccchH
Confidence            32      33467788999999999999977543    234689999998665443322              3499999


Q ss_pred             H----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          147 A----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       147 ~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      +    +++.+..+++++|++++++.||++.+|
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~  183 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD  183 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCH
Confidence            9    555566666778999999999999886

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.95  E-value=2.2e-29  Score=193.92  Aligned_cols=160  Identities=20%  Similarity=0.249  Sum_probs=126.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++++||||+++||++++++|+++|++|++++|++++++++.    . ..++..+.+|++|++++.++++       ++|+
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1           6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            36999999999999999999999999999999866443211    1 1368899999999998877764       5899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|||||...+       ..++|++.+++|+.++..+++++.+.+   +..++|++||...+.+.+..             
T Consensus        86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~-------------  152 (260)
T d1zema1          86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM-------------  152 (260)
T ss_dssp             EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB-------------
T ss_pred             ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch-------------
Confidence            9999996422       234577889999999999999887643   34689999998766443222             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                       ..|+.+|+    +++.++.+++++|++++.+.||++.+|
T Consensus       153 -~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         153 -AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence             34999999    555666667778999999999999886

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.5e-30  Score=194.77  Aligned_cols=159  Identities=23%  Similarity=0.257  Sum_probs=127.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCceEEEEccCCCHHHHHHHhc---CcCEEEEcCccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~---~~d~vi~~a~~~~   77 (209)
                      ++|||||+++||++++++|+++|++|++++|+.++++++.+ ..++..+++|++|+++++++++   ++|++|||||...
T Consensus         9 ~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~   88 (244)
T d1pr9a_           9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecccccc
Confidence            79999999999999999999999999999998765443221 1468899999999999988876   5899999999742


Q ss_pred             C------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH
Q 028444           78 P------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (209)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (209)
                      .      +.++|++.+++|+.++..+++++.+.    .+..++|++||.....+.+..              ..|+.+|+
T Consensus        89 ~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~--------------~~Y~asKa  154 (244)
T d1pr9a_          89 LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH--------------SVYCSTKG  154 (244)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB--------------HHHHHHHH
T ss_pred             ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccch--------------hhhhhhHH
Confidence            2      33567789999999999999987653    234689999998765433222              34999999


Q ss_pred             ----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          148 ----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       148 ----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                          +++.++.+++++|++++.+.||.+.+|
T Consensus       155 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~  185 (244)
T d1pr9a_         155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTS  185 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEeeCcCcCh
Confidence                555566666778999999999999987

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.95  E-value=9e-30  Score=195.97  Aligned_cols=194  Identities=16%  Similarity=0.104  Sum_probs=139.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc--------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF--------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~--------~~d   67 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.+++++..+     ..++.++++|++|++++.++++        ++|
T Consensus         9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_           9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            369999999999999999999999999999998765443211     1468899999999998876652        489


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ++|||||....      ..++|++.+++|+.++..+++++.+.+   +..++|++||.....+.+..             
T Consensus        89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------------  155 (259)
T d2ae2a_          89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE-------------  155 (259)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC-------------
T ss_pred             EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc-------------
Confidence            99999996422      334677899999999999999887643   34689999998665433222             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCC--CcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKL--TTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ..|+.+|+    +++.++.+++++|++++++.||++.+|...  .......+.+..+....+...+..++|+|++
T Consensus       156 -~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~  230 (259)
T d2ae2a_         156 -AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAM  230 (259)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHH
T ss_pred             -cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence             34999999    555566666678999999999999886320  0011122333444444444455566666654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=3.4e-29  Score=192.62  Aligned_cols=192  Identities=17%  Similarity=0.135  Sum_probs=125.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc--------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF--------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~--------~~d   67 (209)
                      ++++||||+++||++++++|+++|++|++++|+.+++++..     ...++..+.+|+++++++.++++        .+|
T Consensus         9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_           9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            37999999999999999999999999999999876543321     11468999999999988766552        489


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ++|||||...+      ..++|++.+++|+.++..+++++.+.+   +..++|++||.....+....             
T Consensus        89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~-------------  155 (259)
T d1xq1a_          89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG-------------  155 (259)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C-------------
T ss_pred             cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccc-------------
Confidence            99999996422      335678899999999999999887653   34689999997765432221             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                       ..|+.+|+    +++.++.+++++|++++++.||++.+|.....  .-.+..+......+...+..++|+|++
T Consensus       156 -~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~pl~R~~~pedvA~~  226 (259)
T d1xq1a_         156 -SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV--YDDEFKKVVISRKPLGRFGEPEEVSSL  226 (259)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHH
T ss_pred             -ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh--chHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence             45999999    55566666777899999999999998853211  111222222333333456677777764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=7.6e-29  Score=188.92  Aligned_cols=161  Identities=24%  Similarity=0.261  Sum_probs=127.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+++||++++++|+++|++|++.+|++++++.+.+  ..++.++++|++|+++++++++       ++|++||
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilin   86 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVN   86 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEE
Confidence            369999999999999999999999999999998765433221  1368899999999999877764       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||....      ..++|++.+++|+.++..+++.+.+.+   +..++|++||...+.+....              ..|
T Consensus        87 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~--------------~~Y  152 (244)
T d1nffa_          87 NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC--------------HGY  152 (244)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------------HHH
T ss_pred             CCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccc--------------cch
Confidence            9997422      234677899999999999999876543   34689999998765443222              349


Q ss_pred             HHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+|+    +++.++.+++++|++++.+.||++.+|.
T Consensus       153 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  189 (244)
T d1nffa_         153 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM  189 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChh
Confidence            99999    5556666777889999999999999873

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.95  E-value=8.2e-30  Score=195.85  Aligned_cols=158  Identities=25%  Similarity=0.282  Sum_probs=125.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      +|||||+++||++++++|+++|++|++.+|++++++++.+     ..++..+++|++|++++.++++       ++|++|
T Consensus         4 alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   83 (255)
T d1gega_           4 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIV   83 (255)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             EEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEE
Confidence            5999999999999999999999999999998765433211     1468899999999999877763       589999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      ||||....      +.++|++.+++|+.++.++++++.+.    .+..++|++||...+.+.+..              .
T Consensus        84 nnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~--------------~  149 (255)
T d1gega_          84 NNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL--------------A  149 (255)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB--------------H
T ss_pred             ecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCccc--------------c
Confidence            99996422      33567789999999999999987553    233579999998765443322              3


Q ss_pred             hHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      .|+.+|+    +++.++.+++++|++++.+.||++.+|
T Consensus       150 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  187 (255)
T d1gega_         150 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  187 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             cchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence            4999999    556666677788999999999999876

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.95  E-value=1.7e-29  Score=194.37  Aligned_cols=159  Identities=18%  Similarity=0.153  Sum_probs=126.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      .+|||||+++||++++++|+++|++|++.+|+.+++++..+     ..++.++++|++|++++.++++       ++|++
T Consensus         4 ValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (257)
T d2rhca1           4 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL   83 (257)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57999999999999999999999999999998654433211     1368999999999999877764       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC-----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....      ..++|++.+++|+.++.++++++.+.+     +..++|++||...+.+.++.             
T Consensus        84 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~-------------  150 (257)
T d2rhca1          84 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA-------------  150 (257)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC-------------
T ss_pred             EecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc-------------
Confidence            999997422      334677899999999999999997642     23579999998765443322             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                       ..|+.+|+    +++.++.+++++|++++++.||++.+|
T Consensus       151 -~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  189 (257)
T d2rhca1         151 -APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP  189 (257)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSH
T ss_pred             -hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCH
Confidence             34999999    555566666677899999999999876

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.95  E-value=3.8e-29  Score=191.18  Aligned_cols=161  Identities=14%  Similarity=0.170  Sum_probs=124.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC--CC-CCCceEEEEccCCCHHHHHHHhc-------CcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~--~~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi   70 (209)
                      ++++||||+++||++++++|+++|++|++.+|++.+...  .. ...++..+++|++|++++.++++       ++|++|
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilV   85 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILV   85 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            369999999999999999999999999999997643111  00 11468899999999999877763       689999


Q ss_pred             EcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCCh
Q 028444           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (209)
Q Consensus        71 ~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~  141 (209)
                      ||||....      ..++|++.+++|+.++.++++++.+.+   +..++|++||.....+.+..              ..
T Consensus        86 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~--------------~~  151 (247)
T d2ew8a1          86 NNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY--------------TH  151 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSC--------------HH
T ss_pred             ECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCccc--------------cc
Confidence            99997422      335678899999999999999887653   24689999998765433222              34


Q ss_pred             HHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          142 YERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       142 Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      |+.+|+    +++.++.+++++|++++++.||++.+|.
T Consensus       152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  189 (247)
T d2ew8a1         152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT  189 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred             chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence            999999    5666677777889999999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.95  E-value=1.2e-29  Score=194.93  Aligned_cols=160  Identities=23%  Similarity=0.253  Sum_probs=126.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+++||++++++|+++|++|++.+|+.++++++.+  ..++..+++|++|++++.++++       ++|++|||
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnn   86 (256)
T d1k2wa_           7 TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNN   86 (256)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEee
Confidence            59999999999999999999999999999998665433221  1468899999999999887764       58999999


Q ss_pred             CccCCC------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      ||....      ..++|++.+++|+.++..+++++.+.    .+..+||++||...+.+.+..              ..|
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~--------------~~Y  152 (256)
T d1k2wa_          87 AALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV--------------GVY  152 (256)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC--------------HHH
T ss_pred             cccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc--------------cch
Confidence            997422      33467788999999999999976543    234689999998765433222              349


Q ss_pred             HHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      +.+|+    +++.++.+++++|++++++.||++.+|.
T Consensus       153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~  189 (256)
T d1k2wa_         153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH  189 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence            99999    5555666677789999999999999884

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.95  E-value=1.2e-29  Score=193.66  Aligned_cols=160  Identities=23%  Similarity=0.238  Sum_probs=125.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC-CCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      .+|||||+++||++++++|+++|++|++.+++. +.++.+.+     ..++.++++|++|++++.++++       ++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            489999999999999999999999999876643 32222111     1368899999999999877764       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +|||||....      ..++|++.+++|+.++.++++++.+.+   +..+||++||...+.+..+.              
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~--------------  148 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ--------------  148 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC--------------
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCC--------------
Confidence            9999996422      335678899999999999999887653   34689999998766443222              


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|+    +++.++.+++++|++++++.||++.+|.
T Consensus       149 ~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~  188 (244)
T d1edoa_         149 ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHH
Confidence            34999999    5556666677789999999999998873

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.95  E-value=2.2e-28  Score=187.42  Aligned_cols=160  Identities=16%  Similarity=0.154  Sum_probs=127.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.++++++.++  .++.++++|++|++++.++++       ++|++||
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   85 (254)
T d1hdca_           6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN   85 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEe
Confidence            4699999999999999999999999999999987654332211  368999999999999877764       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y  142 (209)
                      |||....      ..++|++.+++|+.++..+++++.+.+   +..++|++||...+.+..+.              ..|
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~--------------~~Y  151 (254)
T d1hdca_          86 NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALT--------------SSY  151 (254)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC--------------HHH
T ss_pred             cCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccch--------------hhH
Confidence            9997422      334677899999999999999887642   34689999998765433222              359


Q ss_pred             HHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          143 ERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       143 ~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      +.+|+    +++.++.+++++|++++++.||++.+|
T Consensus       152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~  187 (254)
T d1hdca_         152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP  187 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc
Confidence            99999    555666667778999999999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.95  E-value=6.5e-29  Score=191.20  Aligned_cols=161  Identities=22%  Similarity=0.261  Sum_probs=125.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++++||||+++||++++++|+++|++|++.+|+.++ ++.+    . ...++..+++|++|++++.++++       ++|
T Consensus         8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD   87 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            369999999999999999999999999999998542 2111    1 11368899999999999877764       689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      ++|||||...+      ..++|++.+++|+.++..+++++.+.+    ....||++||...+.+.+..            
T Consensus        88 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~------------  155 (261)
T d1geea_          88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF------------  155 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC------------
T ss_pred             EeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc------------
Confidence            99999997432      334677889999999999999886643    22358899997655433222            


Q ss_pred             cCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                        ..|+.+|+    +++.++.+++++|++++++.||++.+|.
T Consensus       156 --~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~  195 (261)
T d1geea_         156 --VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred             --cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHh
Confidence              34999999    5556666677789999999999999874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.94  E-value=1.2e-28  Score=189.53  Aligned_cols=161  Identities=20%  Similarity=0.197  Sum_probs=124.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc--------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF--------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~--------~~d   67 (209)
                      +++|||||+++||++++++|+++|++|++++|+++++++..+     ...+.++.+|+++.++++++++        .+|
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_           7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            479999999999999999999999999999998755433211     1467889999999998876653        379


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +||||||....      ..++|.+++++|+.++..+.+++.+.+   +..++|++||.....+.+..             
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~-------------  153 (258)
T d1ae1a_          87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV-------------  153 (258)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC-------------
T ss_pred             EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc-------------
Confidence            99999997422      334678899999999999999886543   34689999998765443222             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ..|+.+|.    +++.++++++++|++++++.||++.+|.
T Consensus       154 -~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~  193 (258)
T d1ae1a_         154 -SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL  193 (258)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             -hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence             34999999    4555556666779999999999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.94  E-value=1.8e-28  Score=189.56  Aligned_cols=163  Identities=17%  Similarity=0.232  Sum_probs=126.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++|||||+++||++++++|+++|++|++++|+.+++++    +.....+.++.+|++|++++.++++       ++|++
T Consensus         7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   86 (268)
T d2bgka1           7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM   86 (268)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCccee
Confidence            369999999999999999999999999999998665432    2223468899999999999887764       58999


Q ss_pred             EEcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           70 FHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        70 i~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      |||||....        ..++|++.+++|+.++..+++++.+.+   +..++|++||...+....+.             
T Consensus        87 VnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-------------  153 (268)
T d2bgka1          87 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV-------------  153 (268)
T ss_dssp             EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS-------------
T ss_pred             ccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc-------------
Confidence            999996421        113467789999999999999887653   34589999987654322111             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ...|+++|+    +++.++.+++++|++++++.||++.+|..
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  195 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL  195 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCC
T ss_pred             ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHH
Confidence            024999999    55566666777899999999999999853

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.94  E-value=4e-29  Score=191.46  Aligned_cols=160  Identities=16%  Similarity=0.195  Sum_probs=123.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.++++.    +....++.++++|++|++++.++++       ++|++
T Consensus         7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   86 (251)
T d1zk4a1           7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL   86 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEE
Confidence            369999999999999999999999999999998654332    2223478999999999998877664       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC---c-cEEEEEccceeeccCCccccCCCccccccccC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---V-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      |||||...+      ..++|++.+++|+.++..+++++.+.+.   . .++|++||...+.+.+..              
T Consensus        87 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~--------------  152 (251)
T d1zk4a1          87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL--------------  152 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC--------------
T ss_pred             EeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCc--------------
Confidence            999997422      2345778999999999999998876532   2 378999998765332222              


Q ss_pred             ChHHHHHHHHHHH----HHHH--hhcCCCEEEEecCceecC
Q 028444          140 TQYERSKAVADKI----ALQA--ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e~~----~~~~--~~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|+..+.+    +.++  .++|++++.+.||++.+|
T Consensus       153 ~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~  193 (251)
T d1zk4a1         153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP  193 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred             hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence            3499999955544    4443  356899999999999876

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.94  E-value=9e-29  Score=188.41  Aligned_cols=191  Identities=20%  Similarity=0.145  Sum_probs=135.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.+++++...  ..++.++++|+++++++.++++       ++|++||
T Consensus         6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLin   85 (241)
T d2a4ka1           6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAH   85 (241)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEecc
Confidence            479999999999999999999999999999998765432111  1368899999999999877664       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (209)
                      ||+...+      ..++|++.+++|+.++..+++++.+.+...+.|+++|.......++.              ..|+.+
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~--------------~~Y~~s  151 (241)
T d2a4ka1          86 FAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL--------------AHYAAG  151 (241)
T ss_dssp             GGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHH--------------HHHHHC
T ss_pred             ccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCc--------------cccchh
Confidence            9996422      33457788999999999999999887655444444443221111111              349999


Q ss_pred             HHHHHHH----HHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          146 KAVADKI----ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       146 K~~~e~~----~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      |...+.+    ++++.++|++++++.||.+.+|....   ...+.........+...+..++|+|++
T Consensus       152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~---~~~~~~~~~~~~~p~~r~~~p~dva~~  215 (241)
T d2a4ka1         152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG---LPPWAWEQEVGASPLGRAGRPEEVAQA  215 (241)
T ss_dssp             SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT---SCHHHHHHHHHTSTTCSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh---hhHhHHHHHHhCCCCCCCcCHHHHHHH
Confidence            9955554    45555678999999999998874322   122333334444444456667777654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.94  E-value=1.5e-28  Score=190.61  Aligned_cols=160  Identities=19%  Similarity=0.232  Sum_probs=123.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      ++++||||+++||++++++|+++|++|++.+|+.++++++.        ...++..+.+|++|++++.++++       +
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   84 (274)
T d1xhla_           5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK   84 (274)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999866443211        11368899999999998877664       5


Q ss_pred             cCEEEEcCccC--CC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccc
Q 028444           66 CHVIFHTAALV--EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        66 ~d~vi~~a~~~--~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      +|++|||||..  .+      +.++|++.+++|+.++..+++++.+.+   +..+++++||...+.+.++.         
T Consensus        85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~---------  155 (274)
T d1xhla_          85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY---------  155 (274)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTS---------
T ss_pred             ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCC---------
Confidence            89999999953  11      113467889999999999999887653   23467777776544332222         


Q ss_pred             ccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                           ..|+.+|+    +++.++.+++++|++++.+.||++.+|
T Consensus       156 -----~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~  194 (274)
T d1xhla_         156 -----PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG  194 (274)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred             -----ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence                 34999999    555666777788999999999999987

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.94  E-value=3.9e-28  Score=186.92  Aligned_cols=197  Identities=18%  Similarity=0.138  Sum_probs=138.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++|||||+++||++++++|+++|++|++++|+.+++++..+      ..++.++++|++|++++.++++       ++|+
T Consensus        11 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          11 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            69999999999999999999999999999998876543211      1368899999999999877764       5899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC----CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|||||...+      ..++|++.+++|+.++.++++++.+.+    ....++..||............       ....
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~-------~~~~  163 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN-------GSLT  163 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT-------EECS
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc-------cCcc
Confidence            9999996422      334677899999999999999876542    3345777776544322111000       0011


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ...|+.+|+    +++.++.+++++|++++++.||++.+|....   ............-+...++.++|+|++
T Consensus       164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl~R~g~pedvA~~  234 (260)
T d1h5qa_         164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH---MDKKIRDHQASNIPLNRFAQPEEMTGQ  234 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc---cCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            245999999    5555666677789999999999999875321   122333333434444456667777654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.94  E-value=3e-27  Score=179.79  Aligned_cols=178  Identities=17%  Similarity=0.177  Sum_probs=135.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCe-------EEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc------
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHS-------VRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF------   64 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~-------V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~------   64 (209)
                      ||||||+++||++++++|+++|++       |++.+|+.++++++.     ...++.++++|++|++++.++++      
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERY   83 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999987       888888866543321     11367889999999999877664      


Q ss_pred             -CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccc
Q 028444           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        65 -~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                       ++|++|||||....      ..++|++.+++|+.++..+++++.+.+   +..++|++||...+.+.++.         
T Consensus        84 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~---------  154 (240)
T d2bd0a1          84 GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS---------  154 (240)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC---------
Confidence             58999999997422      335678899999999999999987754   24689999998766443222         


Q ss_pred             ccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCC----------CcchhHHHHHHHHhcCC
Q 028444          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKL----------TTGNLVAKLVRLLFSQH  194 (209)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~----------~~~~~~~~~~~~~~~~~  194 (209)
                           ..|+.+|+    +++.+..+++++|++++.+.||++.+|...          ..++.+...+..++...
T Consensus       155 -----~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~PedvA~~v~~l~s~~  223 (240)
T d2bd0a1         155 -----SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQP  223 (240)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHHTSC
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhHhcCCCHHHHHHHHHHHHcCC
Confidence                 35999998    566666667778999999999999987431          12345666666665433

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=8.8e-28  Score=182.19  Aligned_cols=157  Identities=15%  Similarity=0.144  Sum_probs=123.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC-HHHHHHHhcCcCEEEEcCccCCC-
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAALVEP-   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~vi~~a~~~~~-   78 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.+.+++.    +.+++.+|+++ .+.+.+.+.++|++|||||.... 
T Consensus         5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~----~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~   80 (234)
T d1o5ia_           5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAG   80 (234)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCB
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc----CCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCc
Confidence            3799999999999999999999999999999987654432    56788999986 45566666789999999996422 


Q ss_pred             -----CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH---
Q 028444           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA---  147 (209)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~---  147 (209)
                           ..++|++.+++|+.++..+++++.+.+   +..++|++||.....+....              ..|+.+|+   
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~--------------~~Y~asKaal~  146 (234)
T d1o5ia_          81 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENL--------------YTSNSARMALT  146 (234)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB--------------HHHHHHHHHHH
T ss_pred             chhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccccc--------------ccchhHHHHHH
Confidence                 334577889999999999999886643   23589999997655433222              34999999   


Q ss_pred             -HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          148 -VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       148 -~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       +++.++.+++++|++++++.||++.+|.
T Consensus       147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~  175 (234)
T d1o5ia_         147 GFLKTLSFEVAPYGITVNCVAPGWTETER  175 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             HHHHHHHHHhcccCeEEeecccCccchhh
Confidence             5566667777889999999999999874

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.94  E-value=1.6e-26  Score=178.95  Aligned_cols=181  Identities=19%  Similarity=0.157  Sum_probs=142.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      |||||||||||||++|+++|.++|++|++++|+.                +|++|.+.+.++++  ++|+|||+|+....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            8999999999999999999999999999998752                38999999999887  67999999996432


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        ....+......|+..+..+.+.+....  ..++++||..+|+.....+..|..+..   +...|+.+|..+|.++++ 
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~~~~~e~~~~~---~~~~~~~~k~~~e~~~~~-  139 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAKEPITEFDEVN---PQSAYGKTKLEGENFVKA-  139 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCSSCBCTTSCCC---CCSHHHHHHHHHHHHHHH-
T ss_pred             ccccccchhhccccccccccccccccccc--ccccccccceeeecccccccccccccc---chhhhhhhhhHHHHHHHH-
Confidence              223456678889999999999888763  578888888888877666666554433   336799999998887755 


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce-------EEEEEEeeeeecC
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS-------LVFFHCQITCHAI  209 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva~~i  209 (209)
                        .+.+.+++||+++|||+.    .+...++.....+...       ..++|++|+|+++
T Consensus       140 --~~~~~~i~R~~~vyG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~  193 (281)
T d1vl0a_         140 --LNPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV  193 (281)
T ss_dssp             --HCSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred             --hCCCccccceeEEeCCCc----ccccchhhhhccCCceeecCCceeccchhhhhhhhh
Confidence              467899999999999974    4556666666544433       3579999988753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=3.4e-28  Score=187.64  Aligned_cols=161  Identities=17%  Similarity=0.225  Sum_probs=122.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      +.+|||||+++||++++++|+++|++|++.+|+.++++++.        ...++.++++|++|++++.++++       +
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999876543221        11358999999999999877764       5


Q ss_pred             cCEEEEcCccCCC----------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccce-eeccCCccccCCCcc
Q 028444           66 CHVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFF-ALGSTDGYIADENQV  132 (209)
Q Consensus        66 ~d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~-~~~~~~~~~~~e~~~  132 (209)
                      +|++|||||...+          +.++|++.+++|+.++..+++++.+.+.  ..++|+++|.. .+.+.+..       
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~-------  158 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF-------  158 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTS-------
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCc-------
Confidence            8999999996311          2235778899999999999999877542  24677666653 33222222       


Q ss_pred             ccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                             ..|+.+|+    +++.++.+++++|++++.+.||++.+|.
T Consensus       159 -------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~  198 (264)
T d1spxa_         159 -------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF  198 (264)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred             -------hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence                   34999999    5566667777889999999999998874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.94  E-value=8.2e-28  Score=186.23  Aligned_cols=160  Identities=18%  Similarity=0.217  Sum_probs=121.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhc-------C
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------G   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~-------~   65 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.++++++.        ...++..+++|++|++++.++++       +
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   85 (272)
T d1xkqa_           6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK   85 (272)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            36999999999999999999999999999999876433211        11368899999999999877764       5


Q ss_pred             cCEEEEcCccCCCC------CC----CccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccc-eeeccCCccccCCCcc
Q 028444           66 CHVIFHTAALVEPW------LP----DPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSF-FALGSTDGYIADENQV  132 (209)
Q Consensus        66 ~d~vi~~a~~~~~~------~~----~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~-~~~~~~~~~~~~e~~~  132 (209)
                      +|++|||||...+.      .+    +|++.+++|+.++.++++++.+.+  +..++|+++|. ....+.++.       
T Consensus        86 iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~-------  158 (272)
T d1xkqa_          86 IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF-------  158 (272)
T ss_dssp             CCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSS-------
T ss_pred             ceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCc-------
Confidence            89999999974221      11    366789999999999999987754  22456666553 333322222       


Q ss_pred             ccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                             ..|+.+|+    +++.++.+++++|++++.+.||++.+|
T Consensus       159 -------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  197 (272)
T d1xkqa_         159 -------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  197 (272)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             -------chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence                   34999999    566666777788999999999999887

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.94  E-value=1.5e-27  Score=183.62  Aligned_cols=160  Identities=17%  Similarity=0.175  Sum_probs=124.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC-CCCCCCC------CCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      ++|||||+++||++++++|+++|++|++.+|++. .++.+.+      ..++.++++|++|++++.++++       ++|
T Consensus         6 ~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1           6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            6899999999999999999999999999999753 2221111      1368899999999999887764       589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      ++|||||...+      +.++|++.+++|+.++.++++++.+.+   +..++|++||...+.+.++.             
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~-------------  152 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK-------------  152 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------------
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCc-------------
Confidence            99999997422      335677899999999999999887653   23689999998765433222             


Q ss_pred             CChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ..|+.+|+    +++.++.+++++|++++++.||++.+|.
T Consensus       153 -~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  192 (260)
T d1x1ta1         153 -SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL  192 (260)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred             -chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChh
Confidence             35999999    5555666666789999999999998874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.94  E-value=1.1e-28  Score=189.17  Aligned_cols=160  Identities=13%  Similarity=0.113  Sum_probs=122.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-------cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~~a~   74 (209)
                      ++|||||+++||++++++|+++|++|++.+|+.++++++... ...+.++|+++.+++.+++       .++|++|||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            689999999999999999999999999999987655433221 2334567888876665554       36899999998


Q ss_pred             cCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           75 LVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        75 ~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      ...+       ..++|++.+++|+.++.++++++.+.+   +..++|++||...+.+.+..              ..|+.
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~--------------~~Y~a  146 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKEL--------------STYTS  146 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTC--------------HHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccc--------------ccccc
Confidence            6321       223577889999999999999886653   24689999998765443222              34999


Q ss_pred             HHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          145 SKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       145 sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      +|+    +++.++.+++++|++++++.||++.++..
T Consensus       147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~  182 (252)
T d1zmta1         147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS  182 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTC
T ss_pred             ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcch
Confidence            999    55666677778899999999999988753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.93  E-value=2.1e-26  Score=176.44  Aligned_cols=158  Identities=19%  Similarity=0.216  Sum_probs=125.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCceEEEEccCC-CHHHHHHHh-------cCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVT-DYRSLVDAC-------FGC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~Dl~-~~~~~~~~~-------~~~   66 (209)
                      +++|||||+++||++++++|+++|++|++++|+.++.+.+      ....++.++.+|++ +.+++.+++       .++
T Consensus         6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~i   85 (254)
T d1sbya1           6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTV   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCC
Confidence            3699999999999999999999999999999887653221      12247899999998 555665554       368


Q ss_pred             CEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC------ccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |+||||||..+  .+++++++++|+.++.++++++.+.+.      ..++|++||...+.+....              .
T Consensus        86 DilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~--------------~  149 (254)
T d1sbya1          86 DILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV--------------P  149 (254)
T ss_dssp             CEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS--------------H
T ss_pred             CEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC--------------H
Confidence            99999999753  477899999999999999998876542      2569999998776443322              3


Q ss_pred             hHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          141 QYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       141 ~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      .|+++|+    +++.+..++.++|++++.+.||++.+|
T Consensus       150 ~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~  187 (254)
T d1sbya1         150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence            4999999    555566666677999999999999986

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.93  E-value=2.5e-27  Score=183.82  Aligned_cols=159  Identities=19%  Similarity=0.250  Sum_probs=122.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhc-------CcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~~   72 (209)
                      +++||||+++||++++++|+++|++|++++|+.++++++..+  .++..+.+|+++++++.++++       ++|++|||
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnn   86 (276)
T d1bdba_           7 AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPN   86 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccccccc
Confidence            599999999999999999999999999999987654432221  368899999999998877763       68999999


Q ss_pred             CccCCC-------CCC----CccchhhhHHHHHHHHHHHHHhcC--CccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           73 AALVEP-------WLP----DPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        73 a~~~~~-------~~~----~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ||....       ..+    +|++.+++|+.++..+++++.+.+  +..++|+++|...+.+.++.              
T Consensus        87 AG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~--------------  152 (276)
T d1bdba_          87 AGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGG--------------  152 (276)
T ss_dssp             CCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSC--------------
T ss_pred             ccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCC--------------
Confidence            996422       111    267889999999999999887653  23589999887654332222              


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      ..|+.+|+    +++.++.++++ +++++.+.||.+.+|.
T Consensus       153 ~~Y~asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~  191 (276)
T d1bdba_         153 PLYTAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSDL  191 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCc
Confidence            34999999    45555555655 4999999999998874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.7e-27  Score=179.02  Aligned_cols=158  Identities=18%  Similarity=0.151  Sum_probs=124.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC-------CCCCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-------LPSEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      +++|||||+++||++++++|+++|++|++++|+.+++++       .....++.++++|++|+++++++++       ++
T Consensus         4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL   83 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            469999999999999999999999999999998654321       1112468899999999999877764       58


Q ss_pred             CEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCC------ccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |++|||||...  ..++++++++|+.++.++.+.+.+.+.      ..+||++||...+.+.+..              .
T Consensus        84 DilVnnAg~~~--~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~--------------~  147 (254)
T d2gdza1          84 DILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ--------------P  147 (254)
T ss_dssp             CEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC--------------H
T ss_pred             Ceecccccccc--cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc--------------c
Confidence            99999999753  367889999999999999988866432      2469999998765433222              3


Q ss_pred             hHHHHHHHHHHH------HHHHhhcCCCEEEEecCceecC
Q 028444          141 QYERSKAVADKI------ALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       141 ~Y~~sK~~~e~~------~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      .|+.+|+..+.+      ..+++++|++++++.||++.+|
T Consensus       148 ~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~  187 (254)
T d2gdza1         148 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA  187 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCCh
Confidence            499999955544      3456778999999999999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.9e-27  Score=177.37  Aligned_cols=160  Identities=14%  Similarity=0.097  Sum_probs=124.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCceEEEEccCCCHHHHHHHhc-------CcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   69 (209)
                      .++||||+++||++++++|+++|++|++.+|+.++++++.+     ..++..+.+|++|++++..+++       ++|++
T Consensus         9 v~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idil   88 (244)
T d1yb1a_           9 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSIL   88 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCcee
Confidence            69999999999999999999999999999998775543221     1468999999999999877664       58999


Q ss_pred             EEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        70 i~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |||||....      ..+.+++++++|+.++.++++++.+.+   +.++||++||..++.+.+..              .
T Consensus        89 innag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~--------------~  154 (244)
T d1yb1a_          89 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFL--------------L  154 (244)
T ss_dssp             EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHH--------------H
T ss_pred             EeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCc--------------H
Confidence            999997422      123466889999999999999887643   34689999998776443222              3


Q ss_pred             hHHHHHHH----HHHHHHHHhh---cCCCEEEEecCceecCC
Q 028444          141 QYERSKAV----ADKIALQAAS---EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       141 ~Y~~sK~~----~e~~~~~~~~---~~~~~~~~rp~~v~g~~  175 (209)
                      .|+.+|++    ++.+..++++   +|++++++.||++.++.
T Consensus       155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~  196 (244)
T d1yb1a_         155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  196 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChh
Confidence            49999995    5555555544   47999999999998873

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.93  E-value=3.8e-27  Score=180.51  Aligned_cols=160  Identities=23%  Similarity=0.240  Sum_probs=124.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc-------CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vi~   71 (209)
                      ++++||||+++||++++++|+++|++|++.+|+.++++++.+  ..++.++++|++|++++.++++       ++|++||
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVn   86 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVN   86 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence            369999999999999999999999999999998665433221  1368899999999988877664       5899999


Q ss_pred             cCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||...+      ..++|++.+++|+.++..+++++.+.++  ..+||++||...+.+.+..              ..|+
T Consensus        87 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~--------------~~Y~  152 (253)
T d1hxha_          87 NAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQY--------------AGYS  152 (253)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTB--------------HHHH
T ss_pred             cccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcccc--------------cccc
Confidence            9997432      2345778999999999999999887642  3689999998765432222              3599


Q ss_pred             HHHH----HHHHHHHHHhhc--CCCEEEEecCceecC
Q 028444          144 RSKA----VADKIALQAASE--GLPIVPVYPGVIYGP  174 (209)
Q Consensus       144 ~sK~----~~e~~~~~~~~~--~~~~~~~rp~~v~g~  174 (209)
                      .+|+    +++.++.+++++  +++++++.||++.+|
T Consensus       153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~  189 (253)
T d1hxha_         153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP  189 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred             chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence            9999    444555666654  499999999999875

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.3e-27  Score=179.45  Aligned_cols=193  Identities=18%  Similarity=0.134  Sum_probs=139.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh---cCcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d~vi~~a~~~~~   78 (209)
                      ++|||||+++||+++++.|+++|++|++.+|++++++++.+..+++...+|+.+.+.+....   .++|++|||||....
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~   87 (245)
T d2ag5a1           8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHH   87 (245)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccccCC
Confidence            59999999999999999999999999999999877776666668999999999887776655   478999999997432


Q ss_pred             ------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceee-ccCCccccCCCccccccccCChHHHHHH-
Q 028444           79 ------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCTQYERSKA-  147 (209)
Q Consensus        79 ------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~-~~~~~~~~~e~~~~~~~~~~~~Y~~sK~-  147 (209)
                            +.++|++.+++|+.++..+++++.+.+   +..++|++||.... .+..              ....|+.+|+ 
T Consensus        88 ~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~--------------~~~~Y~~sKaa  153 (245)
T d2ag5a1          88 GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV--------------NRCVYSTTKAA  153 (245)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT--------------TBHHHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCcc--------------chhHHHHHHHH
Confidence                  334677889999999999999887642   34689999986431 1111              1145999999 


Q ss_pred             ---HHHHHHHHHhhcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          148 ---VADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       148 ---~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                         +++.++.+++++|++++++.||.+.+|.....   ........+.+....+...++.++|+|++
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~  220 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAML  220 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence               44555666677899999999999998732100   00112223333333444455666666654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-27  Score=187.33  Aligned_cols=160  Identities=16%  Similarity=0.151  Sum_probs=121.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC--------C--CCCCceEEEEccCCCHHHHHHHhc------
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------L--PSEGALELVYGDVTDYRSLVDACF------   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~--------~--~~~~~~~~~~~Dl~~~~~~~~~~~------   64 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.++++.        .  ....++..+++|++|++++.++++      
T Consensus        13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   92 (297)
T d1yxma1          13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   92 (297)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            369999999999999999999999999999998654321        1  112468899999999999877764      


Q ss_pred             -CcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC---ccEEEEEccceeeccCCccccCCCcccc
Q 028444           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---VEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        65 -~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                       ++|++|||||....      ..++|++.+++|+.++..+++++.+.+.   ..++|++|+.... ..+..         
T Consensus        93 G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~-~~~~~---------  162 (297)
T d1yxma1          93 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-GFPLA---------  162 (297)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-CCTTC---------
T ss_pred             CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc-ccccc---------
Confidence             58999999996322      3356778999999999999999876542   2468877664322 11111         


Q ss_pred             ccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                           ..|+.+|+    +++.++.+++++|+++++|.||.+.+|.
T Consensus       163 -----~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  202 (297)
T d1yxma1         163 -----VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  202 (297)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             -----ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcc
Confidence                 34999999    4555556666779999999999998863

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=2.6e-27  Score=181.98  Aligned_cols=161  Identities=19%  Similarity=0.151  Sum_probs=119.6

Q ss_pred             EEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++|||||+|  +||++++++|+++|++|++.+|+++..+..    ........+++|++|+++++++++       ++|+
T Consensus        10 ~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi   89 (256)
T d1ulua_          10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDY   89 (256)
T ss_dssp             EEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceE
Confidence            699999987  899999999999999999988875422111    111357789999999999877764       5899


Q ss_pred             EEEcCccCC----------CCCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccc
Q 028444           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        69 vi~~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      +||||+...          .+..++...+++|+.++..+++++.+.+. ..++|++||.....+.++.            
T Consensus        90 lVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~------------  157 (256)
T d1ulua_          90 LVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY------------  157 (256)
T ss_dssp             EEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC------------
T ss_pred             EEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCc------------
Confidence            999998631          12234566899999999999999887642 2579999997765433222            


Q ss_pred             cCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                        ..|+.+|+    +++.++.+++++|++++.+.||.+.++..
T Consensus       158 --~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~  198 (256)
T d1ulua_         158 --NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAA  198 (256)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccc
Confidence              34999999    55556666677899999999999998744

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-27  Score=182.84  Aligned_cols=161  Identities=23%  Similarity=0.280  Sum_probs=122.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      .+|||||+++||+++|++|+++|++|++.+|+.++++++.       ...++.++++|++|++++.++++       ++|
T Consensus        12 v~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD   91 (257)
T d1xg5a_          12 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD   91 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            5999999999999999999999999999999876543321       11368899999999999877663       689


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc----C-CccEEEEEccceeeccCCccccCCCcccccc
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----K-TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ++|||||...+      ..+++++.+++|+.++.++.+++.+.    . ...++|++||...+...+...          
T Consensus        92 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~----------  161 (257)
T d1xg5a_          92 ICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV----------  161 (257)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG----------
T ss_pred             EEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcc----------
Confidence            99999997422      33457788999999999998887542    1 236899999987653221111          


Q ss_pred             ccCChHHHHHHHHHHH----HHHH--hhcCCCEEEEecCceecC
Q 028444          137 YFCTQYERSKAVADKI----ALQA--ASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e~~----~~~~--~~~~~~~~~~rp~~v~g~  174 (209)
                        ...|+.+|+....+    ..++  ++++++++++.||.+-++
T Consensus       162 --~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~  203 (257)
T d1xg5a_         162 --THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  203 (257)
T ss_dssp             --GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             --cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence              13499999955554    4554  356899999999999875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=9.8e-26  Score=172.29  Aligned_cols=165  Identities=17%  Similarity=0.164  Sum_probs=123.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHH---hCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc---------
Q 028444            1 MKILVSGASGYLGGRLCHALL---KQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF---------   64 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~---~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~---------   64 (209)
                      ++||||||+++||++++++|+   ++|++|++.+|+.++++++.    ...++.++.+|++|++++.++++         
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            159999999999999999997   47999999999987765432    12579999999999988866543         


Q ss_pred             CcCEEEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC--------------CccEEEEEccceeeccCC
Q 028444           65 GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--------------TVEKIIYTSSFFALGSTD  123 (209)
Q Consensus        65 ~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~~i~~ss~~~~~~~~  123 (209)
                      ++|++|||||....       ..+++++.+++|+.++..+++++.+.+              +..++|++||....-.. 
T Consensus        83 ~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~-  161 (248)
T d1snya_          83 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG-  161 (248)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT-
T ss_pred             CcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC-
Confidence            48999999996422       112356789999999999999886532              23579999996543211 


Q ss_pred             ccccCCCccccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          124 GYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       124 ~~~~~e~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                       .+.         .....|+.||+    +++.+..++.++|++++.+.||++.++..
T Consensus       162 -~~~---------~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~  208 (248)
T d1snya_         162 -NTD---------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG  208 (248)
T ss_dssp             -CCS---------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT
T ss_pred             -CCC---------CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcc
Confidence             100         01135999999    55555666667799999999999998843

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.92  E-value=1.3e-26  Score=178.28  Aligned_cols=160  Identities=19%  Similarity=0.178  Sum_probs=120.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCC-----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++|||||+++||++++++|+++|++|++.+|+..+ .+...     ...++..+.+|++|++++.++++       ++|
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   86 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD   86 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCc
Confidence            368999999999999999999999999988776432 22111     11368899999999999887764       589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEccce-eeccCCccccCCCccccccccC
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFF-ALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~ss~~-~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      ++|||||....      ..+++++.+++|+.++..+++.+.+.++. ++++.++|.. .+.+.+..              
T Consensus        87 ilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~--------------  152 (259)
T d1ja9a_          87 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNH--------------  152 (259)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSC--------------
T ss_pred             EEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCc--------------
Confidence            99999997422      23456788999999999999999887532 3566665543 23222111              


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|+    +++.++++++++|++++.|.||++.+|
T Consensus       153 ~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~  191 (259)
T d1ja9a_         153 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD  191 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccCh
Confidence            34999998    555666666777999999999999875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=7.6e-26  Score=177.25  Aligned_cols=160  Identities=17%  Similarity=0.105  Sum_probs=121.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-----------CceEEEEccCCCHHHHHHHh-------
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----------GALELVYGDVTDYRSLVDAC-------   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~Dl~~~~~~~~~~-------   63 (209)
                      ++|||||+++||++++++|+++|++|++.+|+.+........           .......+|++|.+++++++       
T Consensus         9 valITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~   88 (302)
T d1gz6a_           9 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTF   88 (302)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHT
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHc
Confidence            599999999999999999999999999999876543221111           12345677888877765544       


Q ss_pred             cCcCEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCcccc
Q 028444           64 FGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      .++|++|||||...+      ..++|++.+++|+.++.++++++.+.+   +.++||++||..++.+..+.         
T Consensus        89 G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~---------  159 (302)
T d1gz6a_          89 GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ---------  159 (302)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC---------
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCc---------
Confidence            369999999997432      334678899999999999999987654   34689999998765443322         


Q ss_pred             ccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          135 EKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 ~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                           ..|+++|+    +++.+..+++++|++++++.||.+.++.
T Consensus       160 -----~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~  199 (302)
T d1gz6a_         160 -----ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT  199 (302)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch
Confidence                 34999999    5566666677789999999999987653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.92  E-value=2.9e-25  Score=172.82  Aligned_cols=184  Identities=18%  Similarity=0.203  Sum_probs=133.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEEEEcCccCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~~~~   78 (209)
                      |||||||||||||++|+++|.++|+ ++.++++...            +.+|++|.+.+.++++  ++|+|||+||....
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            9999999999999999999999886 4455554332            2359999999999887  46999999997532


Q ss_pred             --CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHH
Q 028444           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (209)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~  156 (209)
                        +..++...++.|+.++.+|++++++..  .+++++||..+|+.....+.+|..+..   |.+.|+.+|..+|......
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~~~~~~~E~~~~~---p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGTGDIPWQETDATS---PLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCCTTCCBCTTSCCC---CSSHHHHHHHHHHHHHHHH
T ss_pred             cccccCccccccccccccccchhhhhccc--cccccccccccccCCCCCCCccccccC---CCchHhhhhhhhhhhHHhh
Confidence              456778899999999999999998763  578899998888876666666655432   4478999999999887764


Q ss_pred             hhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCC-------ceEEEEEEeeeeec
Q 028444          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQH-------FSLVFFHCQITCHA  208 (209)
Q Consensus       157 ~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~  208 (209)
                      ..   +..++|++..++....   .....+.+.+..+.       ....++|++|++++
T Consensus       143 ~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  195 (298)
T d1n2sa_         143 CP---KHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADC  195 (298)
T ss_dssp             CS---SEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHH
T ss_pred             hc---ccccccccceeeccCC---ccchhhhhhhcccceeecccceeecccccchHHHH
Confidence            43   3556666666644322   22333334333332       23346777777654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-24  Score=168.71  Aligned_cols=159  Identities=21%  Similarity=0.140  Sum_probs=121.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC---CCCCC-------C-CCCCceEEEEccCCCHHHHHHHhc-----Cc
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT---SDISG-------L-PSEGALELVYGDVTDYRSLVDACF-----GC   66 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~---~~~~~-------~-~~~~~~~~~~~Dl~~~~~~~~~~~-----~~   66 (209)
                      +|||||+++||++++++|+++|++|+.+.+..   +....       + ....++..+.+|++|.+++.++++     .+
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            68999999999999999999998876665432   22111       1 112478999999999999988774     48


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeeccCCccccCCCccccccc
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~  137 (209)
                      |++||||+....      ..+++++.+++|+.++.++++++.+.+   +.+++|++||..+..+.+..            
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~------------  152 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFN------------  152 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTC------------
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCc------------
Confidence            999999996422      334677889999999999999887653   34689999998765433222            


Q ss_pred             cCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       138 ~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                        ..|+++|+    +++.+..++.++|++++++.||++.++.
T Consensus       153 --~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~  192 (285)
T d1jtva_         153 --DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (285)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChH
Confidence              45999999    5666677777789999999999998863

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.91  E-value=2.3e-24  Score=164.74  Aligned_cols=167  Identities=19%  Similarity=0.184  Sum_probs=117.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCC--CCceEEEEccCCCHHHHHHHhc---------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~---------~~d~   68 (209)
                      +||||||+++||++++++|+++|+  +|++.+|+.++++++.+  ..++.++++|++|.+++.++++         ++|+
T Consensus         5 tilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idi   84 (250)
T d1yo6a1           5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSL   84 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEE
Confidence            699999999999999999999995  68888998776554322  2479999999999988876652         3899


Q ss_pred             EEEcCccCCC-------CCCCccchhhhHHHHHHHHHHHHHhcC--------------CccEEEEEccceeeccCCcccc
Q 028444           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--------------TVEKIIYTSSFFALGSTDGYIA  127 (209)
Q Consensus        69 vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~~i~~ss~~~~~~~~~~~~  127 (209)
                      +|||||...+       ..+++++.+++|+.++.++++.+.+.+              ...+++++|+...+......  
T Consensus        85 linnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~--  162 (250)
T d1yo6a1          85 LINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--  162 (250)
T ss_dssp             EEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS--
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcc--
Confidence            9999996422       112356789999999999999886532              11357777765443221100  


Q ss_pred             CCCccccccccCChHHHHHHH----HHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          128 DENQVHEEKYFCTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~----~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       .    ....+...|+.||++    ++.+..++.+.|++++++.||++.++.
T Consensus       163 -~----~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m  209 (250)
T d1yo6a1         163 -G----SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL  209 (250)
T ss_dssp             -T----TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred             -c----ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC
Confidence             0    001112459999994    445555556679999999999998863

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.91  E-value=1.7e-25  Score=175.04  Aligned_cols=160  Identities=14%  Similarity=0.114  Sum_probs=117.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhc-------CcCE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   68 (209)
                      ++|||||+|+||++++++|+++|++|++++|+.+++++..+      ...+..+++|+++.+++..++.       ++|+
T Consensus        27 ~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          27 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            69999999999999999999999999999998764332111      1467899999999999876653       6899


Q ss_pred             EEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhc----CCccEEEEEccceeeccCCccccCCCcccccccc
Q 028444           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (209)
Q Consensus        69 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~  138 (209)
                      +|||||....      ...++++.+.+|..+...+...+...    .....++.+||..........             
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~-------------  173 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV-------------  173 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC-------------
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc-------------
Confidence            9999997432      12345667888998888887665422    223457777776544332222             


Q ss_pred             CChHHHHHHH----HHHHHHHHhhcCCCEEEEecCceecCC
Q 028444          139 CTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       139 ~~~Y~~sK~~----~e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                       ..|+.+|+.    ++.++.+++++|+++++|.||++.+|.
T Consensus       174 -~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  213 (294)
T d1w6ua_         174 -VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  213 (294)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence             349999994    455556666779999999999998874

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.1e-24  Score=167.47  Aligned_cols=198  Identities=19%  Similarity=0.196  Sum_probs=132.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHH-H-----hcCcCEEEEcCcc
Q 028444            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-A-----CFGCHVIFHTAAL   75 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~-----~~~~d~vi~~a~~   75 (209)
                      |||||||||||++|+++|+++|+ +|+++++-....+. ..  ..+....|..+.+.+.. .     +..+++|+|+|+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~   78 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN--LVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HH--HHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-hc--ccccchhhhccchHHHHHHhhhhcccchhhhhhhccc
Confidence            89999999999999999999995 68888643221111 00  00111122223222222 2     2457899999987


Q ss_pred             CCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHH
Q 028444           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (209)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~  155 (209)
                      ............+.|+.++.+++++++... + ++++.||..+|........+++..   ..+.+.|+.+|.++|.+++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~~~~~~~~~---~~~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_          79 SSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREY---EKPLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGG---CCCSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccc-c-cccccccccccccccccccccccc---cccccccccccchhhhhccc
Confidence            665556667788899999999999999874 4 466666666665544333333332   23347799999999999999


Q ss_pred             Hh-hcCCCEEEEecCceecCCCCCc---chhHHHHHHHHhcCC----------ceEEEEEEeeeeec
Q 028444          156 AA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLVRLLFSQH----------FSLVFFHCQITCHA  208 (209)
Q Consensus       156 ~~-~~~~~~~~~rp~~v~g~~~~~~---~~~~~~~~~~~~~~~----------~~~~~~~~~dva~~  208 (209)
                      +. +.+++++++||+.+|||+....   ...+..+.+.+..++          ....|+|++|++++
T Consensus       154 ~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~  220 (307)
T d1eq2a_         154 ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (307)
T ss_dssp             HGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             cccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHH
Confidence            86 4589999999999999976321   234555555554433          23468999998876

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.90  E-value=9.5e-25  Score=168.91  Aligned_cols=160  Identities=19%  Similarity=0.200  Sum_probs=121.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCC----C-CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~----~-~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++|||||+++||++++++|+++|++|++.+|+..+ ++.+    . ....+.++++|++|++++.++++       ++|
T Consensus        19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   98 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLD   98 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            369999999999999999999999999999987542 1111    1 11368899999999999877764       589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeec-cCCccccCCCccccccccC
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALG-STDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~-~~~~~~~~e~~~~~~~~~~  139 (209)
                      ++||+++....      ..+++++.+++|+.++..+++++.+.+. .+++++++|..... ....              .
T Consensus        99 ilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~--------------~  164 (272)
T d1g0oa_          99 IVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK--------------H  164 (272)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS--------------C
T ss_pred             ccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccc--------------h
Confidence            99999996422      2345678899999999999999988763 35788887754321 1111              1


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.+|+    +++.++.+++++|++++.|.||++.+|
T Consensus       165 ~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~  203 (272)
T d1g0oa_         165 AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  203 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence            34999998    455556666778999999999999875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.2e-25  Score=171.82  Aligned_cols=175  Identities=14%  Similarity=0.130  Sum_probs=124.0

Q ss_pred             CEE-EEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCCCCCCCC-----CCCceEEEEccCCCHHHHHHHhc-------Cc
Q 028444            1 MKI-LVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GC   66 (209)
Q Consensus         1 m~i-lItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~-------~~   66 (209)
                      |+| |||||+++||++++++|+++ |++|++.+|+.+++++..     ...++.++++|++|.++++++++       ++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            444 89999999999999999986 899999999876543221     11468899999999999877653       58


Q ss_pred             CEEEEcCccCCCC------CCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCcccc------------
Q 028444           67 HVIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIA------------  127 (209)
Q Consensus        67 d~vi~~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~------------  127 (209)
                      |++|||||...+.      .++++..+++|+.++..+++.+.+.++ ..++|++||............            
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~  162 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  162 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence            9999999974321      124556899999999999999998753 257999999755422110000            


Q ss_pred             ---------------CCCccccccccCChHHHHHHHHH----HHHHHHhh----cCCCEEEEecCceecCC
Q 028444          128 ---------------DENQVHEEKYFCTQYERSKAVAD----KIALQAAS----EGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       128 ---------------~e~~~~~~~~~~~~Y~~sK~~~e----~~~~~~~~----~~~~~~~~rp~~v~g~~  175 (209)
                                     ..........+...|+.||....    .+.+++++    .+++++.+.||++.++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence                           00000111122356999999544    44455543    38999999999999874

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=1.8e-24  Score=163.29  Aligned_cols=189  Identities=21%  Similarity=0.168  Sum_probs=128.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe--EEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC-
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS--VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP-   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~-   78 (209)
                      +|||||||||||++++++|+++|++  |+.+.|++.+...+..  +++++.+|+++.+.+.++++++|+|||+|+.... 
T Consensus         5 tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~   82 (252)
T d2q46a1           5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG--EADVFIGDITDADSINPAFQGIDALVILTSAVPKM   82 (252)
T ss_dssp             EEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC--CTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEE
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC--CcEEEEeeeccccccccccccceeeEEEEeecccc
Confidence            8999999999999999999999965  5566776654433332  7889999999999999999999999999985311 


Q ss_pred             --------------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           79 --------------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        79 --------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                                    ....+....++|+.++.++++..... ..+.+.+.|+...+.+..+...         .....|..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~---------~~~~~~~~  152 (252)
T d2q46a1          83 KPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDHPLNK---------LGNGNILV  152 (252)
T ss_dssp             CTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTCGGGG---------GGGCCHHH
T ss_pred             ccccchhhhhhcccccccchhhhccccccceeeccccccc-cccccccccccccCCCCccccc---------ccccchhh
Confidence                          11234566789999999999998877 3577888877655433211111         11133566


Q ss_pred             HHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          145 SKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       145 sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      .+.+.+.+.   ...+++++++||+++|||........... ....  ......++|++|+|++
T Consensus       153 ~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~--~~~~~~~i~~~Dva~a  210 (252)
T d2q46a1         153 WKRKAEQYL---ADSGTPYTIIRAGGLLDKEGGVRELLVGK-DDEL--LQTDTKTVPRADVAEV  210 (252)
T ss_dssp             HHHHHHHHH---HHSSSCEEEEEECEEECSCTTSSCEEEES-TTGG--GGSSCCEEEHHHHHHH
T ss_pred             hhhhhhhhh---hcccccceeecceEEECCCcchhhhhhcc-Cccc--ccCCCCeEEHHHHHHH
Confidence            555544333   24689999999999999975322111000 0001  1222357788888775

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-24  Score=165.54  Aligned_cols=191  Identities=23%  Similarity=0.188  Sum_probs=131.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHh-------cCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDAC-------FGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~-------~~~d~vi~   71 (209)
                      +.+|||||+++||++++++|+++|++|++++|+.++++...++  .......+|+.+.+.+.+..       ...|.+++
T Consensus         6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (248)
T d2o23a1           6 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN   85 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccccc
Confidence            3689999999999999999999999999999987765432211  36788899999987765544       35788888


Q ss_pred             cCccCC--------C----CCCCccchhhhHHHHHHHHHHHHHhcC---------CccEEEEEccceeeccCCccccCCC
Q 028444           72 TAALVE--------P----WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADEN  130 (209)
Q Consensus        72 ~a~~~~--------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~i~~ss~~~~~~~~~~~~~e~  130 (209)
                      +++...        +    ..+++++.+++|+.++.++++++.+.+         +..+||++||...+.+.++.     
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~-----  160 (248)
T d2o23a1          86 CAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ-----  160 (248)
T ss_dssp             CCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC-----
T ss_pred             ccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCc-----
Confidence            876421        1    123566789999999999999986542         23479999998776543332     


Q ss_pred             ccccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCcchhHHHHHHHHhcCCce-EEEEEEeee
Q 028444          131 QVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLVRLLFSQHFS-LVFFHCQIT  205 (209)
Q Consensus       131 ~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv  205 (209)
                               ..|+.+|+    +++.+..+++++|++++++.||.+.++.....   ..+....+....+. ..+..++|+
T Consensus       161 ---------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~pl~~R~g~peev  228 (248)
T d2o23a1         161 ---------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLASQVPFPSRLGDPAEY  228 (248)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSSSCSCBCHHHH
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC---CHHHHHHHHhcCCCCCCCcCHHHH
Confidence                     34999999    55555666667799999999999998853221   11222222222221 345567777


Q ss_pred             eec
Q 028444          206 CHA  208 (209)
Q Consensus       206 a~~  208 (209)
                      |++
T Consensus       229 A~~  231 (248)
T d2o23a1         229 AHL  231 (248)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=2.5e-24  Score=165.41  Aligned_cols=159  Identities=18%  Similarity=0.225  Sum_probs=124.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHh---CCCeEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhc-------
Q 028444            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~-------   64 (209)
                      .++||||+++||++++++|++   +|++|++++|+.++++++.       ...++.++++|+++++++.++++       
T Consensus         8 valITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~   87 (259)
T d1oaaa_           8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhh
Confidence            589999999999999999975   7999999999876544321       12368899999999999877752       


Q ss_pred             ----CcCEEEEcCccCCC---------CCCCccchhhhHHHHHHHHHHHHHhcCC-----ccEEEEEccceeeccCCccc
Q 028444           65 ----GCHVIFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYI  126 (209)
Q Consensus        65 ----~~d~vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~i~~ss~~~~~~~~~~~  126 (209)
                          ..|++|||||...+         ..++|++++++|+.++.++++++.+.+.     ..++|++||...+.+.++. 
T Consensus        88 ~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~-  166 (259)
T d1oaaa_          88 PEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGW-  166 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTC-
T ss_pred             hccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccc-
Confidence                35799999996422         1134667899999999999999988753     2479999998765443222 


Q ss_pred             cCCCccccccccCChHHHHHHHHHHHHHHHh--hcCCCEEEEecCceecC
Q 028444          127 ADENQVHEEKYFCTQYERSKAVADKIALQAA--SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~--~~~~~~~~~rp~~v~g~  174 (209)
                                   ..|+.+|+..+.+.+.++  .+|++++.+.||.+.++
T Consensus       167 -------------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~  203 (259)
T d1oaaa_         167 -------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             -------------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence                         459999998887777765  45899999999999886

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.90  E-value=1.2e-23  Score=161.55  Aligned_cols=158  Identities=26%  Similarity=0.324  Sum_probs=124.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhc------Cc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF------GC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~------~~   66 (209)
                      ++|||||+|+||++++++|+++|+ +|++++|+..+.+...        ...++.++.+|++|.+++..+++      ++
T Consensus        11 t~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i   90 (259)
T d2fr1a1          11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPL   90 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccccc
Confidence            699999999999999999999998 5888888743322211        11368899999999999988775      37


Q ss_pred             CEEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCC
Q 028444           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (209)
Q Consensus        67 d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~  140 (209)
                      |.|+||++....      ..+++...+++|+.++.++.+++.+. ...+||++||....-+..+.              .
T Consensus        91 ~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~SS~a~~~g~~~~--------------~  155 (259)
T d2fr1a1          91 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPGL--------------G  155 (259)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTTC--------------T
T ss_pred             cccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeecchhhccCCccc--------------H
Confidence            899999997432      22345667999999999999988876 46799999998765443332              3


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          141 QYERSKAVADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       141 ~Y~~sK~~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                      .|+++|...+.+.+++...|+++++|.||.+.++
T Consensus       156 ~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         156 GYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGS  189 (259)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--
T ss_pred             HHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCC
Confidence            4999999999999998889999999999998754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=1.6e-23  Score=158.72  Aligned_cols=176  Identities=15%  Similarity=0.101  Sum_probs=126.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-------c--CcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------F--GCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~--~~d~vi~   71 (209)
                      ++||||||+|+||++++++|+++|++|+++++++.+...     .......|..+.++...+.       .  ++|++||
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn   77 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC   77 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence            479999999999999999999999999999987653221     3445556666555443322       2  4899999


Q ss_pred             cCccCC---CC----CCCccchhhhHHHHHHHHHHHHHhcCC-ccEEEEEccceeeccCCccccCCCccccccccCChHH
Q 028444           72 TAALVE---PW----LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (209)
Q Consensus        72 ~a~~~~---~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (209)
                      |||...   +.    .+++++.+++|+.++.++++++.+.++ ..++|++||.....+.+..              ..|+
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~--------------~~Y~  143 (236)
T d1dhra_          78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM--------------IGYG  143 (236)
T ss_dssp             CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB--------------HHHH
T ss_pred             CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC--------------cccH
Confidence            999532   11    134567899999999999999987642 3579999998765433222              3599


Q ss_pred             HHHHHHHHHHHHHh------hcCCCEEEEecCceecCCC-----------CCcchhHHHHHHHHhcCCc
Q 028444          144 RSKAVADKIALQAA------SEGLPIVPVYPGVIYGPGK-----------LTTGNLVAKLVRLLFSQHF  195 (209)
Q Consensus       144 ~sK~~~e~~~~~~~------~~~~~~~~~rp~~v~g~~~-----------~~~~~~~~~~~~~~~~~~~  195 (209)
                      .||+..+.+.+.++      +.|++++.+.||++.+|..           +...+.+...+..+.+++.
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchhhcCCCHHHHHHHHHHHhCCCc
Confidence            99998777777764      2479999999999998621           1123456666666665543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=1.9e-22  Score=150.24  Aligned_cols=148  Identities=20%  Similarity=0.223  Sum_probs=111.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~~~~   77 (209)
                      +||||||||||||++++++|+++|+  +|+.+.|++...     ...+   ..+..|..++...+ ..+|+||||+|...
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~~   74 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----HPRL---DNPVGPLAELLPQLDGSIDTAFCCLGTTI   74 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----CTTE---ECCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----cccc---cccccchhhhhhccccchheeeeeeeeec
Confidence            5899999999999999999999997  566666654321     1133   33455555554444 45899999998643


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                      ........+.+.|+.++.++++++++. +.++++++||..+++..                .+.|..+|..+|+.+++  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~----------------~~~y~~~K~~~E~~l~~--  135 (212)
T d2a35a1          75 KEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKS----------------SIFYNRVKGELEQALQE--  135 (212)
T ss_dssp             HHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHTT--
T ss_pred             cccccccccccchhhhhhhcccccccc-ccccccccccccccccc----------------ccchhHHHHHHhhhccc--
Confidence            333445678899999999999999987 68999999998776432                14599999999987653  


Q ss_pred             hcCC-CEEEEecCceecCCC
Q 028444          158 SEGL-PIVPVYPGVIYGPGK  176 (209)
Q Consensus       158 ~~~~-~~~~~rp~~v~g~~~  176 (209)
                       .+. +++++||+.+|||..
T Consensus       136 -~~~~~~~I~Rp~~v~G~~~  154 (212)
T d2a35a1         136 -QGWPQLTIARPSLLFGPRE  154 (212)
T ss_dssp             -SCCSEEEEEECCSEESTTS
T ss_pred             -cccccceeeCCcceeCCcc
Confidence             355 589999999999865

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.88  E-value=7.6e-23  Score=154.86  Aligned_cols=154  Identities=18%  Similarity=0.163  Sum_probs=115.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-------h--cCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-------C--FGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-------~--~~~d~vi~~   72 (209)
                      |||||||+++||++++++|+++|++|++++|++.+...     ....+.+|..+.+.....       +  .++|+||||
T Consensus         4 kVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn   78 (235)
T d1ooea_           4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   78 (235)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            79999999999999999999999999999998654321     344556677665443322       1  248999999


Q ss_pred             CccCC---CCC----CCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEccceeeccCCccccCCCccccccccCChHHH
Q 028444           73 AALVE---PWL----PDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (209)
Q Consensus        73 a~~~~---~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (209)
                      ||...   +..    +.++.++++|+.++..+++++.+.++. .++|++||...+.+.++.              ..|++
T Consensus        79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--------------~~Y~a  144 (235)
T d1ooea_          79 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM--------------IGYGM  144 (235)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB--------------HHHHH
T ss_pred             CcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccc--------------cchHH
Confidence            99532   111    235567999999999999999886532 579999998765443222              45999


Q ss_pred             HHHHHHHHHHHHh-h-----cCCCEEEEecCceecC
Q 028444          145 SKAVADKIALQAA-S-----EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       145 sK~~~e~~~~~~~-~-----~~~~~~~~rp~~v~g~  174 (209)
                      +|++.+.+.+.++ +     .+++++.+.||++.+|
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~  180 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP  180 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc
Confidence            9998888777764 2     3678999999999886

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-23  Score=161.92  Aligned_cols=160  Identities=19%  Similarity=0.148  Sum_probs=121.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHh-------cCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDAC-------FGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~-------~~~d   67 (209)
                      +++||||||++||++++++|+++|++|++++|+.++++++..      ...+..+.+|+++.+.+....       ...|
T Consensus        15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~   94 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD   94 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCcc
Confidence            369999999999999999999999999999998765443221      135788899999987775544       3589


Q ss_pred             EEEEcCccCCC------CCCCccchhhhHHHHHHHHHHHHHhcCC--ccEEEEEccceeeccCCccccCCCccccccccC
Q 028444           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (209)
Q Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~  139 (209)
                      +++|||+....      ..+++.+.+++|+.++..+++.+.+.+.  ..++|++||..++.+.+..              
T Consensus        95 ~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~--------------  160 (269)
T d1xu9a_          95 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV--------------  160 (269)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC--------------
T ss_pred             ccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCc--------------
Confidence            99999996422      2234567899999999999999876542  3589999998765433222              


Q ss_pred             ChHHHHHHHHH----HHHHHHhh--cCCCEEEEecCceecC
Q 028444          140 TQYERSKAVAD----KIALQAAS--EGLPIVPVYPGVIYGP  174 (209)
Q Consensus       140 ~~Y~~sK~~~e----~~~~~~~~--~~~~~~~~rp~~v~g~  174 (209)
                      ..|+.||++.+    .+..+++.  .+++++.+.||.+.++
T Consensus       161 ~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~  201 (269)
T d1xu9a_         161 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  201 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence            45999999544    45555543  3689999999999886

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.88  E-value=9e-24  Score=165.17  Aligned_cols=187  Identities=17%  Similarity=0.110  Sum_probs=128.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      +||||||||||||++|+++|+++|++|++++|+.......       ....+++++++|+.|.+.+..++.+.+++++++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~   83 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   83 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhh
Confidence            5899999999999999999999999999999976533210       012479999999999999999999999999998


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHH
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~  153 (209)
                      +...         ...|..++.++++++.+.. ..++++.||..++......         +..+...|..+|...+.+.
T Consensus        84 ~~~~---------~~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~  144 (312)
T d1qyda_          84 AGGV---------LSHHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDIMEH---------ALQPGSITFIDKRKVRRAI  144 (312)
T ss_dssp             CCSS---------SSTTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTSCCC---------CCSSTTHHHHHHHHHHHHH
T ss_pred             hhcc---------cccchhhhhHHHHHHHHhc-CCcEEEEeeccccCCCccc---------ccchhhhhhHHHHHHHHhh
Confidence            7421         1344555777888888774 4567777776554332111         1112244666666665543


Q ss_pred             HHHhhcCCCEEEEecCceecCCCCCcchhHHHH------HHHHhcCCceEEEEEEeeeeecC
Q 028444          154 LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKL------VRLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       154 ~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~dva~~i  209 (209)
                         ...+++++++||+.+||+...........+      +..+..++....|+|++|+|+++
T Consensus       145 ---~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  203 (312)
T d1qyda_         145 ---EAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT  203 (312)
T ss_dssp             ---HHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred             ---cccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHH
Confidence               246899999999999996432111100000      01123467788999999998763

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=7.2e-23  Score=155.28  Aligned_cols=153  Identities=28%  Similarity=0.268  Sum_probs=114.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc------CcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vi~~a~   74 (209)
                      +++|||||+++||++++++|+++|++|++.+|+.+..       .....++|+++......+..      ..+.++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   74 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-------cceEeeccccchhhhHHHHHhhhccccccchhhhhh
Confidence            4799999999999999999999999999999986542       46678899999877766543      3455566655


Q ss_pred             cC------CC----CCCCccchhhhHHHHHHHHHHHHHhc------C---CccEEEEEccceeeccCCccccCCCccccc
Q 028444           75 LV------EP----WLPDPSRFFAVNVEGLKNVVQAAKET------K---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        75 ~~------~~----~~~~~~~~~~~n~~~~~~l~~~~~~~------~---~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      ..      ..    ..+.+++.+++|+.++..+++.+.+.      +   +..++|++||...+.+..+.          
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~----------  144 (241)
T d1uaya_          75 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ----------  144 (241)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC----------
T ss_pred             ccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc----------
Confidence            31      11    11235567899999999998877543      1   23579999998776443322          


Q ss_pred             cccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecC
Q 028444          136 KYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       136 ~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                          ..|+.+|+    +++.++.+++++|++++.+.||++.++
T Consensus       145 ----~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~  183 (241)
T d1uaya_         145 ----AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP  183 (241)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred             ----hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence                34999999    555666667778999999999999886

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=3.8e-23  Score=158.54  Aligned_cols=162  Identities=14%  Similarity=0.116  Sum_probs=118.1

Q ss_pred             CEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++|||||+|  +||+++++.|+++|++|++.+|+++..+...    ........+.|+++..++.+.+.       ..|
T Consensus         6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   85 (258)
T d1qsga_           6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD   85 (258)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred             CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccc
Confidence            4799999999  8999999999999999999999855322211    11467788999999888766653       479


Q ss_pred             EEEEcCccCCC-----------CCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEccceeeccCCccccCCCccccc
Q 028444           68 VIFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEE  135 (209)
Q Consensus        68 ~vi~~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~  135 (209)
                      ++||+|+....           ..+.+...+.+|+.+...+++++.+..+. ..+|++||.....+.+..          
T Consensus        86 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~----------  155 (258)
T d1qsga_          86 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY----------  155 (258)
T ss_dssp             EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT----------
T ss_pred             eEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCc----------
Confidence            99999986321           11123456788899999999988876533 357888876543222111          


Q ss_pred             cccCChHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCCC
Q 028444          136 KYFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       136 ~~~~~~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                          ..|+.+|++.+    .++++++++|+++++++||.+.++..
T Consensus       156 ----~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~  196 (258)
T d1qsga_         156 ----NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  196 (258)
T ss_dssp             ----THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccc
Confidence                45999999555    55556667799999999999998854

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.85  E-value=1.3e-22  Score=157.58  Aligned_cols=182  Identities=24%  Similarity=0.252  Sum_probs=121.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |||||||||||||++++++|+++|++|++++|+........        ...+++++.+|+.+.+.+...+++++.++|+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~   83 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   83 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence            58999999999999999999999999999999865432211        0146899999999999999999999999999


Q ss_pred             CccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHH
Q 028444           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (209)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~  152 (209)
                      ++.             .+..++.++.+++... ...++++.||...+......       ...   ...+...+...+..
T Consensus        84 ~~~-------------~~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~  139 (307)
T d1qyca_          84 VGS-------------LQIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNVHA-------VEP---AKSVFEVKAKVRRA  139 (307)
T ss_dssp             CCG-------------GGSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSCCC-------CTT---HHHHHHHHHHHHHH
T ss_pred             ccc-------------cccchhhHHHHHHHHh-ccccceeeeccccccccccc-------ccc---ccccccccccccch
Confidence            874             2233456677888777 35677777765333221110       000   01233444444433


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCCcchhHHHHH-----HHHhcCCceEEEEEEeeeeecC
Q 028444          153 ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLV-----RLLFSQHFSLVFFHCQITCHAI  209 (209)
Q Consensus       153 ~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~dva~~i  209 (209)
                      +   .+.+++++++||+++||+.............     .....++....|+|++|+|+++
T Consensus       140 ~---~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  198 (307)
T d1qyca_         140 I---EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFT  198 (307)
T ss_dssp             H---HHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred             h---hccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHH
Confidence            3   3468999999999999975422111111100     0122466677899999998763

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.85  E-value=1.8e-21  Score=151.00  Aligned_cols=158  Identities=22%  Similarity=0.195  Sum_probs=106.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCC-----------------------CCCCceEEEEccCCCHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL-----------------------PSEGALELVYGDVTDYR   57 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~-----------------------~~~~~~~~~~~Dl~~~~   57 (209)
                      .+|||||+++||++++++|+++|++|++.+|+..+ .+.+                       .....+....+|+++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            47999999999999999999999999998876431 1000                       00012344567799888


Q ss_pred             HHHHHh-------cCcCEEEEcCccCCC------CCCCcc--------------chhhhHHHHHHHHHHHHHhc------
Q 028444           58 SLVDAC-------FGCHVIFHTAALVEP------WLPDPS--------------RFFAVNVEGLKNVVQAAKET------  104 (209)
Q Consensus        58 ~~~~~~-------~~~d~vi~~a~~~~~------~~~~~~--------------~~~~~n~~~~~~l~~~~~~~------  104 (209)
                      ++.+++       .++|++|||||...+      ..++++              ..+.+|+.++..+.+++.+.      
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence            887765       368999999997422      111121              35789999999999876542      


Q ss_pred             ---CCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceec
Q 028444          105 ---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYG  173 (209)
Q Consensus       105 ---~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~~~~~~~~~rp~~v~g  173 (209)
                         .+..++|+++|.....+..+.              ..|+.+|+    +++.++++++++|++++++.||++..
T Consensus       164 ~~~~~~~~ii~~~s~~~~~~~~~~--------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~  225 (284)
T d1e7wa_         164 KHRGTNYSIINMVDAMTNQPLLGY--------------TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  225 (284)
T ss_dssp             GGSCSCEEEEEECCTTTTSCCTTC--------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             HhcCCCCcccccccccccCCccce--------------eeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence               122467777776543332222              34999999    55566666777899999999997543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.82  E-value=4.8e-21  Score=147.91  Aligned_cols=162  Identities=14%  Similarity=0.090  Sum_probs=105.0

Q ss_pred             CEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCceEEEEccCCCHHHHHHHhc-------CcC
Q 028444            1 MKILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (209)
Q Consensus         1 m~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   67 (209)
                      +++|||||+|  +||+++|++|+++|++|++++|+++..+...    ......+.++|+++++++.++++       .+|
T Consensus         6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id   85 (274)
T d2pd4a1           6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD   85 (274)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred             CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCC
Confidence            4799999877  8999999999999999999999854221111    11456788999999988877663       589


Q ss_pred             EEEEcCccCCC------CC-CCccchhhhHH---HHHHHHHHHHHhcCCccE-EEEEccceeeccCCccccCCCcccccc
Q 028444           68 VIFHTAALVEP------WL-PDPSRFFAVNV---EGLKNVVQAAKETKTVEK-IIYTSSFFALGSTDGYIADENQVHEEK  136 (209)
Q Consensus        68 ~vi~~a~~~~~------~~-~~~~~~~~~n~---~~~~~l~~~~~~~~~~~~-~i~~ss~~~~~~~~~~~~~e~~~~~~~  136 (209)
                      ++|||++....      .. ..+..+...+.   .+...+.....+..+... ++++|+.....+....           
T Consensus        86 ~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~-----------  154 (274)
T d2pd4a1          86 FIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY-----------  154 (274)
T ss_dssp             EEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC-----------
T ss_pred             eEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccc-----------
Confidence            99999996322      11 11222222222   233344444444333334 4445444433322211           


Q ss_pred             ccCChHHHHHHHHH----HHHHHHhhcCCCEEEEecCceecCCC
Q 028444          137 YFCTQYERSKAVAD----KIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       137 ~~~~~Y~~sK~~~e----~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                         ..|+.+|...+    .+..+++++|++++++.||.+.++..
T Consensus       155 ---~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~  195 (274)
T d2pd4a1         155 ---NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS  195 (274)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             ---hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccc
Confidence               34999999555    45555667899999999999998744

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.81  E-value=1.6e-20  Score=144.42  Aligned_cols=160  Identities=16%  Similarity=0.108  Sum_probs=108.4

Q ss_pred             CEEEEEcCC--ChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCCC--CCceEEEEccCCCHHHHHHHhc----------C
Q 028444            1 MKILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPS--EGALELVYGDVTDYRSLVDACF----------G   65 (209)
Q Consensus         1 m~ilItG~~--G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~Dl~~~~~~~~~~~----------~   65 (209)
                      +++|||||+  .+||++++++|+++|++|++.+|+..+. +++.+  ..+...+++|+++++++..+++          .
T Consensus         7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~   86 (268)
T d2h7ma1           7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNK   86 (268)
T ss_dssp             CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCC
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCC
Confidence            379999954  5799999999999999999999986543 11111  1357788999999877655432          3


Q ss_pred             cCEEEEcCccCCCC-----------CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCcccc
Q 028444           66 CHVIFHTAALVEPW-----------LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE  134 (209)
Q Consensus        66 ~d~vi~~a~~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~  134 (209)
                      +|+++|||++....           ..++.+.+..|+.+.....+...+.......+.++|.......+..         
T Consensus        87 ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~---------  157 (268)
T d2h7ma1          87 LDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY---------  157 (268)
T ss_dssp             EEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT---------
T ss_pred             cceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCccc---------
Confidence            79999999964210           1123344667777777777777665433445555544333222111         


Q ss_pred             ccccCChHHHHHHHHHHH----HHHHhhcCCCEEEEecCceecC
Q 028444          135 EKYFCTQYERSKAVADKI----ALQAASEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~e~~----~~~~~~~~~~~~~~rp~~v~g~  174 (209)
                           ..|+.+|...+.+    ..++.++|++++.+.||.+.++
T Consensus       158 -----~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~  196 (268)
T d2h7ma1         158 -----NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  196 (268)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             -----chhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence                 3499999955554    5555667999999999999865

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.80  E-value=4.5e-20  Score=141.64  Aligned_cols=161  Identities=19%  Similarity=0.242  Sum_probs=105.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCC------CCCceEEEEccCCC----HHHHHHH-------h
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLP------SEGALELVYGDVTD----YRSLVDA-------C   63 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~------~~~~~~~~~~Dl~~----~~~~~~~-------~   63 (209)
                      .+|||||+++||++++++|+++|++|++.+|+.++. +.+.      ........+.|..+    .+.+.++       +
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999986532 1110      01356666666654    3333332       2


Q ss_pred             cCcCEEEEcCccCCCCC---------C--------CccchhhhHHHHHHHHHHHHHhcC--------CccEEEEEcccee
Q 028444           64 FGCHVIFHTAALVEPWL---------P--------DPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFA  118 (209)
Q Consensus        64 ~~~d~vi~~a~~~~~~~---------~--------~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~i~~ss~~~  118 (209)
                      .++|++|||||...+..         .        .+...+..|+.+............        ....++++|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            46999999999643211         0        122345566666666666555432        1234666666554


Q ss_pred             eccCCccccCCCccccccccCChHHHHHHH----HHHHHHHHhhcCCCEEEEecCceecCCC
Q 028444          119 LGSTDGYIADENQVHEEKYFCTQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGK  176 (209)
Q Consensus       119 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~----~e~~~~~~~~~~~~~~~~rp~~v~g~~~  176 (209)
                      ....++.              ..|+.||+.    ++.+..++.++|++++.+.||++.+|..
T Consensus       163 ~~~~~~~--------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~  210 (266)
T d1mxha_         163 DLPLPGF--------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA  210 (266)
T ss_dssp             GSCCTTC--------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS
T ss_pred             cccCcch--------------hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc
Confidence            3332222              349999994    5555666667899999999999998744

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.79  E-value=2e-19  Score=140.19  Aligned_cols=194  Identities=8%  Similarity=0.035  Sum_probs=117.8

Q ss_pred             CEEEEEcCCC--hhHHHHHHHHHhCCCeEEEEEcCCC-----------C--CCCCC---CC---CceEEEEccC------
Q 028444            1 MKILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS-----------D--ISGLP---SE---GALELVYGDV------   53 (209)
Q Consensus         1 m~ilItG~~G--~IG~~l~~~l~~~g~~V~~~~r~~~-----------~--~~~~~---~~---~~~~~~~~Dl------   53 (209)
                      +++|||||+|  +||++++++|+++|++|++.+|++.           .  .....   ..   .++..+..++      
T Consensus         9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (297)
T d1d7oa_           9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV   88 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence            3799999887  9999999999999999999988531           0  00000   00   0122222222      


Q ss_pred             ------------C---CHHHH----HHHhcCcCEEEEcCccCC----C----CCCCccchhhhHHHHHHHHHHHHHhcCC
Q 028444           54 ------------T---DYRSL----VDACFGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT  106 (209)
Q Consensus        54 ------------~---~~~~~----~~~~~~~d~vi~~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~  106 (209)
                                  +   +.+.+    .+.+.++|++|||||...    +    ..++|.+.+++|+.++..+++++.+.+.
T Consensus        89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~  168 (297)
T d1d7oa_          89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN  168 (297)
T ss_dssp             CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhh
Confidence                        1   11222    222347999999998632    1    2234677899999999999999987643


Q ss_pred             c-cEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHH----HHHHHHh-hcCCCEEEEecCceecCCCCCcc
Q 028444          107 V-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD----KIALQAA-SEGLPIVPVYPGVIYGPGKLTTG  180 (209)
Q Consensus       107 ~-~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e----~~~~~~~-~~~~~~~~~rp~~v~g~~~~~~~  180 (209)
                      . +..+.+++........ .            ....|..+|....    .++.+++ ++|++++.+.||++.++..... 
T Consensus       169 ~~g~~~~~~~~~~~~~~~-~------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-  234 (297)
T d1d7oa_         169 PGGASISLTYIASERIIP-G------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-  234 (297)
T ss_dssp             EEEEEEEEECGGGTSCCT-T------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-
T ss_pred             cCCcceeeeehhhccccc-c------------cccceecccccccccccccchhccccceEEecccccccccchhhhhc-
Confidence            2 2355555443221110 0            0134999998444    4555554 5699999999999999865321 


Q ss_pred             hhHHHHHHHHhcCCceEEEEEEeeeeec
Q 028444          181 NLVAKLVRLLFSQHFSLVFFHCQITCHA  208 (209)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~dva~~  208 (209)
                      ....++.+......+...++.++|+|++
T Consensus       235 ~~~~~~~~~~~~~~PlgR~~~peevA~~  262 (297)
T d1d7oa_         235 GFIDTMIEYSYNNAPIQKTLTADEVGNA  262 (297)
T ss_dssp             SHHHHHHHHHHHHSSSCCCBCHHHHHHH
T ss_pred             cCCHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            2233344444433334445666666653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.78  E-value=1.9e-19  Score=142.36  Aligned_cols=159  Identities=11%  Similarity=0.060  Sum_probs=108.1

Q ss_pred             EEEEEc--CCChhHHHHHHHHHhCCCeEEEEEcCCCC--------CCCCC-----C----CCceEEEEc-----------
Q 028444            2 KILVSG--ASGYLGGRLCHALLKQGHSVRALVRRTSD--------ISGLP-----S----EGALELVYG-----------   51 (209)
Q Consensus         2 ~ilItG--~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--------~~~~~-----~----~~~~~~~~~-----------   51 (209)
                      .+||||  ++++||++++++|+++|++|++.+++...        .....     .    ........+           
T Consensus         4 VAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (329)
T d1uh5a_           4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDID   83 (329)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCC
T ss_pred             EEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccc
Confidence            589999  55799999999999999999998765320        00000     0    011223322           


Q ss_pred             ---------cCCCHHHHHHH-------hcCcCEEEEcCccCCC--------CCCCccchhhhHHHHHHHHHHHHHhcCCc
Q 028444           52 ---------DVTDYRSLVDA-------CFGCHVIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETKTV  107 (209)
Q Consensus        52 ---------Dl~~~~~~~~~-------~~~~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  107 (209)
                               |+++.+++..+       +.++|++|||||...+        ..++|.+.+++|+.++..+++++.+.++.
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~  163 (329)
T d1uh5a_          84 EETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP  163 (329)
T ss_dssp             HHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc
Confidence                     44454433333       3479999999996422        22456778999999999999999887532


Q ss_pred             -cEEEEEccceeeccCCccccCCCccccccccCChHHHHHH----HHHHHHHHHhh-cCCCEEEEecCceec
Q 028444          108 -EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAAS-EGLPIVPVYPGVIYG  173 (209)
Q Consensus       108 -~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~----~~e~~~~~~~~-~~~~~~~~rp~~v~g  173 (209)
                       +++|++||.......+++             ...|+.+|+    +++.++.++++ +|++|++|.||.+.+
T Consensus       164 ~GsIv~iss~~~~~~~p~y-------------~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         164 QSSIISLTYHASQKVVPGY-------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEECGGGTSCCTTC-------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccccccceeehhccccccc-------------chhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence             579999887654332211             134999998    44555566664 599999999999977

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.77  E-value=5.4e-19  Score=134.87  Aligned_cols=162  Identities=19%  Similarity=0.154  Sum_probs=100.4

Q ss_pred             CE-EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh--------cCcCEEEE
Q 028444            1 MK-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--------FGCHVIFH   71 (209)
Q Consensus         1 m~-ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~~d~vi~   71 (209)
                      || |+||||+++||++++++|+++|++|++++|+..+.            ..|+.+.+......        ..+|+++|
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------IADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            65 69999999999999999999999999999975432            23777765544332        24899999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC---CccEEEEEccceeec-cCCccccCC--C-----------cccc
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALG-STDGYIADE--N-----------QVHE  134 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~ss~~~~~-~~~~~~~~e--~-----------~~~~  134 (209)
                      ||+... ..+.+.....+|..+...+.+...+..   .......+++..... .....+...  .           ....
T Consensus        69 ~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~  147 (257)
T d1fjha_          69 CAGLGP-QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAG  147 (257)
T ss_dssp             CCCCCT-TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCC
T ss_pred             cCCCCC-cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccC
Confidence            999643 334566678888888888877665421   223445554432111 000000000  0           0000


Q ss_pred             ccccCChHHHHHHHH----HHHHHHHhhcCCCEEEEecCceecCC
Q 028444          135 EKYFCTQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPG  175 (209)
Q Consensus       135 ~~~~~~~Y~~sK~~~----e~~~~~~~~~~~~~~~~rp~~v~g~~  175 (209)
                      .......|+.+|+..    +.++.+++++|++++.+.||++.+|.
T Consensus       148 ~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~  192 (257)
T d1fjha_         148 EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL  192 (257)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred             CCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChh
Confidence            000113599999955    45555667789999999999998874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.74  E-value=1.2e-17  Score=132.66  Aligned_cols=148  Identities=22%  Similarity=0.201  Sum_probs=108.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC--CCCCCCceEEEEccCCCHH-HHHHHhcCcCEEEEcCccCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYR-SLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~vi~~a~~~~   77 (209)
                      ++|+|||||||||++++++|+++|++|+++.|+..+..  .+....+++.+++|+.|.. .+..++.++|+++++.... 
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~~-   82 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ-   82 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST-
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecccc-
Confidence            47999999999999999999999999999999865432  1223358999999999855 4667888999888775421 


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccceeeccCCccccCCCccccccccCChHHHHHHHHHHHHHHHh
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~  157 (209)
                               ...|+..+.++++++.+.+ ..++++.||...........            ..+|..+|...+.+..   
T Consensus        83 ---------~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~~~~------------~~~~~~~k~~~~~~~~---  137 (350)
T d1xgka_          83 ---------AGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYGPWP------------AVPMWAPKFTVENYVR---  137 (350)
T ss_dssp             ---------TSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTSSCC------------CCTTTHHHHHHHHHHH---
T ss_pred             ---------cchhhhhhhHHHHHHHHhC-CCceEEEeeccccccCCccc------------chhhhhhHHHHHHHHH---
Confidence                     1346677889999999884 66777777754433221111            1346777877766544   


Q ss_pred             hcCCCEEEEecCceecC
Q 028444          158 SEGLPIVPVYPGVIYGP  174 (209)
Q Consensus       158 ~~~~~~~~~rp~~v~g~  174 (209)
                      +.++++.++||+++++.
T Consensus       138 ~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_         138 QLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             TSSSCEEEEEECEEGGG
T ss_pred             hhccCceeeeeceeecc
Confidence            35788999999998763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.48  E-value=9.2e-16  Score=111.84  Aligned_cols=95  Identities=17%  Similarity=0.133  Sum_probs=71.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+.+.+    ..++....+|++|.+++.+++.++|+||||||..
T Consensus        24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~g  103 (191)
T d1luaa1          24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIG  103 (191)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCTT
T ss_pred             CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCccc
Confidence            379999999999999999999999999999998765433221    1346678899999999999999999999999863


Q ss_pred             CC--CCCCccchhhhHHHHHH
Q 028444           77 EP--WLPDPSRFFAVNVEGLK   95 (209)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~   95 (209)
                      ..  ..+++...+++|+.+..
T Consensus       104 ~~~~~~e~~~~~~~~nv~~~~  124 (191)
T d1luaa1         104 LELLPQAAWQNESSIEIVADY  124 (191)
T ss_dssp             CCCBCHHHHHTCTTCCEEEEC
T ss_pred             cccCCHHHHHhhhcceeehhH
Confidence            11  22233344455543333

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.92  E-value=2.6e-10  Score=77.49  Aligned_cols=72  Identities=22%  Similarity=0.312  Sum_probs=60.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   73 (209)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++++++..+++....+...+.+|.+|++.+.++ ++++|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            99999997 99999999999999999999999876554433323678999999999999887 46789888653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.87  E-value=3.3e-09  Score=72.79  Aligned_cols=112  Identities=21%  Similarity=0.146  Sum_probs=78.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC--CCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      ||.|+||+|.+|++++..|..+|  .++.+++.++.+...  +........... ........+.++++|+||..||...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKG-YLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEECCCcCC
Confidence            79999999999999999999888  478888876542111  110001111111 1123445677899999999999765


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ....+..+.++.|+.....+++.+.+......++.+|
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            5556677889999999999999999985334555554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.76  E-value=9.7e-08  Score=65.32  Aligned_cols=109  Identities=24%  Similarity=0.202  Sum_probs=75.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHH-hCC--CeEEEEEcCCCC------CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALL-KQG--HSVRALVRRTSD------ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~-~~g--~~V~~~~r~~~~------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      |||.|+|++|.+|++++-.|. +.+  .++.+++..+..      +...........+ ..-.+.    +.++++|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~~----~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDAT----PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCCH----HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCCc----cccCCCCEEEE
Confidence            899999999999999998875 434  788888764321      0011111112221 122222    35789999999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      +||..+....+..+.++.|..-...+.+.+.+......+|.+|
T Consensus        76 taG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          76 SAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            9997655556777889999999999999999885444566665

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.69  E-value=1.6e-07  Score=64.19  Aligned_cols=108  Identities=16%  Similarity=0.107  Sum_probs=75.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCC--CC-------C--CCCCCceEEEEccCCCHHHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD--IS-------G--LPSEGALELVYGDVTDYRSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~--~~-------~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   67 (209)
                      |||.|+||+|.+|+.++..|+.+|  .++.+++++++.  ++       .  .......+....--.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            899999999999999999999988  589999876421  11       0  00011222221111122    3568999


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEE
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT  113 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~  113 (209)
                      +||-+||.......+..+.++.|..-...+.+.+.+.. .+.++.+
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence            99999997655445666789999999999999998874 4455434

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.66  E-value=2e-08  Score=68.73  Aligned_cols=107  Identities=21%  Similarity=0.147  Sum_probs=75.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCCCC----C-----CCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP----S-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~----~-----~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      |||.|+|+ |.+|+.++..|+.+|  .++.+++.++++.+...    .     ....++...  .+.    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence            89999996 999999999999887  58999998776432100    0     012333322  122    346889999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-+||.......+..+.++.|..-...+++.+.+......++.+|
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            999997655555566788999999999999999875333455443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.65  E-value=1.7e-08  Score=69.28  Aligned_cols=106  Identities=13%  Similarity=0.178  Sum_probs=70.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCC-------C-CCCCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------G-LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~-------~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|+.++..|+.+|  .+++++++++++.+       . ...........+|..       .++++|+||
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------~~~~adivv   77 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS-------DCKDADLVV   77 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG-------GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH-------HhccccEEE
Confidence            69999995 999999999999887  68999998764221       0 001123444555532       358899999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+||.......+..+.+..|+.-...+.+.+.+.....-+|.+|
T Consensus        78 itag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99997555455667788999999999999999885333444544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.54  E-value=5.2e-08  Score=66.38  Aligned_cols=106  Identities=19%  Similarity=0.238  Sum_probs=74.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC--------CCCCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--------LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      |||.|+|+ |.+|+.++..|+.++  .++.+++.++++++.        ............|.       +.++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence            89999996 999999999888777  589999877543211        00012344444432       2468899999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      -+||..+.......+.+..|..-...+++.+.+......++.+|
T Consensus        73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            99997655555566788899999999999999885334444444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.52  E-value=2.4e-08  Score=68.20  Aligned_cols=105  Identities=19%  Similarity=0.119  Sum_probs=74.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----------CCCCCceEEEE-ccCCCHHHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----------LPSEGALELVY-GDVTDYRSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----------~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d   67 (209)
                      |||.|+|+ |.+|+.++-.|+.+|  .++.+++.++++.+-          ... ....... .|.       +.++++|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~-~~~~i~~~~d~-------~~~~~ad   71 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID-KYPKIVGGADY-------SLLKGSE   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTT-CCCEEEEESCG-------GGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccC-CCCccccCCCH-------HHhcccc
Confidence            99999995 999999999998887  579999877643210          000 1122222 232       2568899


Q ss_pred             EEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        68 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      +||-.||..+....+..+.++.|..-...+.+.+.+......++.+|
T Consensus        72 iVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            99999997665556677789999999999999999885334455554

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.46  E-value=9.2e-08  Score=64.50  Aligned_cols=72  Identities=21%  Similarity=0.293  Sum_probs=59.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~   74 (209)
                      ++++|.|+ |.+|+++++.|.++|++|++++.+++..+++... +...+.+|.++++.+.++ +.++|.||-+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~-~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT-CSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh-CCcceeeecccchhhhccCCccccEEEEEcC
Confidence            46788875 9999999999999999999999988766555443 677889999999999887 678998875543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.46  E-value=1.7e-07  Score=63.85  Aligned_cols=106  Identities=16%  Similarity=0.110  Sum_probs=74.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCC--CCCC----CC----CCCCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRT--SDIS----GL----PSEGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~--~~~~----~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      ||.|+||+|.+|+.++..|..++  .++.+++.+.  +..+    .+    ...........|.   +    .++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            79999999999999999999988  3788887532  1110    00    0112344444443   2    35799999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-.||..+....+..+.++.|..-...+.+.+.+......++.+|
T Consensus        75 vitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          75 VITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            999997655555667789999999999999999885334555554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.46  E-value=1e-07  Score=67.10  Aligned_cols=73  Identities=16%  Similarity=0.184  Sum_probs=56.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ++|+|.|| |++|+.+++.|.++|++|++++|+.++.+.+... ........+..+.......+...|.++.+..
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            47999986 9999999999999999999999998766554333 2445555677777777778888888886643

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.45  E-value=1.3e-06  Score=59.38  Aligned_cols=105  Identities=24%  Similarity=0.256  Sum_probs=69.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC--------CCCCCceEEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--------LPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      ||.|+|+ |.+|+.++-.|+.++  .++.++++++++++.        ...........+|   .    +.++++|+||-
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivvi   74 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCDVIVV   74 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCSEEEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCCCceEEE
Confidence            7899996 999999999999887  489999987764321        1111223333322   2    34688999999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      +||.......+..+.++.|..-...+++.+.+......+|.+|
T Consensus        75 tag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          75 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             CCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             ecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            9997655456667789999999999999999875334455554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.44  E-value=8.4e-08  Score=68.46  Aligned_cols=38  Identities=29%  Similarity=0.459  Sum_probs=35.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (209)
                      |||.|+||+|.||++++++|+++|++|++.+|++++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~   38 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE   38 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            99999999999999999999999999999999876543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.43  E-value=2.3e-07  Score=63.68  Aligned_cols=105  Identities=16%  Similarity=0.252  Sum_probs=75.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCC-------CC--CCCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------GL--PSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~-------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      ||.|+|+ |.+|+.++..|+.+|  .++.++++++++++       ..  .....+.....|.       +.++++|+||
T Consensus         8 KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daDvvv   79 (148)
T d1ldna1           8 RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDADLVV   79 (148)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCSEEE
T ss_pred             eEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccceeEE
Confidence            7999996 999999999999887  47999988755311       00  0011334444443       3468899999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      .+||..+.......+.+..|..-...+.+.+.+......+|.+|
T Consensus        80 itag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99997655556667889999999999999999885444566654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.38  E-value=9.8e-08  Score=65.13  Aligned_cols=106  Identities=16%  Similarity=0.171  Sum_probs=74.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----CC----CCCceEEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~~----~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      ||.|+|+ |.+|++++..|+.+|  .++.++++++++.+.    +.    ..........+  +.    +.++++|+||-
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVVi   75 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVVI   75 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEEE
Confidence            7899996 999999999999888  489999887643210    00    00122333222  22    24678999999


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      +||..+....+..+.++.|..-...+.+.+.+......+|.+|
T Consensus        76 taG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          76 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             ecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9998665556667789999999999999999885334455554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.33  E-value=1.7e-07  Score=64.78  Aligned_cols=110  Identities=15%  Similarity=0.070  Sum_probs=70.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC----e---EEEEEc--CCCCCCC------CCCCCceEEEEccCCCHHHHHHHhcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH----S---VRALVR--RTSDISG------LPSEGALELVYGDVTDYRSLVDACFG   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~----~---V~~~~r--~~~~~~~------~~~~~~~~~~~~Dl~~~~~~~~~~~~   65 (209)
                      |||.|+||+|++|+.++-.|...+.    .   ..++.-  +.+..+.      .........+...    ......+++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   80 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFKD   80 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhccc
Confidence            5899999999999999999987652    1   112111  1111100      0000122222222    122457899


Q ss_pred             cCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEc
Q 028444           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTS  114 (209)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~s  114 (209)
                      +|+||-+||..+....+..+.++.|+.-...+.+.+.+.... ..++.+|
T Consensus        81 advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            999999999876655667788999999999999999986333 3455554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.33  E-value=5.5e-07  Score=62.15  Aligned_cols=108  Identities=17%  Similarity=0.100  Sum_probs=71.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCC---------CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      +||.|+|+ |.+|+.++..|..++ .++.+++.++++++....         ........     ....+..++++|+||
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~~adiVv   81 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGADCVI   81 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCSEEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-----cCchhhhhcCCCeEE
Confidence            38999997 999999998888777 588888877653221000         00111111     111245678999999


Q ss_pred             EcCccCCCCC-----CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWL-----PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      -+||......     .+..+.+..|......+++.+.+.....-++.+|
T Consensus        82 itag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          82 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9999653322     2455678899999999999999885334455444

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.32  E-value=9.1e-07  Score=60.67  Aligned_cols=107  Identities=16%  Similarity=0.170  Sum_probs=70.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCC---------CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      +||.|+|+ |.+|+.++..|..++ .++.++++++++.+....         .........+  +    .+.++++|+||
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEEE
Confidence            48999995 999999998887777 588888887653221100         0112222211  1    13457899999


Q ss_pred             EcCccCCCC-----CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPW-----LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      -+|+.....     ..+..+.++.|..-...+++.+++......++.+|
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999964321     12345678999999999999999885334455554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=98.30  E-value=4.1e-07  Score=61.96  Aligned_cols=106  Identities=18%  Similarity=0.140  Sum_probs=66.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCC----CCC-----CCceEEE-EccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LPS-----EGALELV-YGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~----~~~-----~~~~~~~-~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      +||.|+|+ |.+|+.++-.|+.++ .++.+++.++++...    +..     .....+. ..|.       +.++++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCEE
Confidence            48999995 999999999888777 588888876653211    000     0111222 1222       235788999


Q ss_pred             EEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-+||.......+..+.++.|..-...+++.+.+......++.+|
T Consensus        74 vitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          74 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999997654445566788999999999999999874334444443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.26  E-value=3.5e-07  Score=63.41  Aligned_cols=105  Identities=15%  Similarity=0.085  Sum_probs=74.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCCCC-------CCC--CCCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS-------GLP--SEGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~~~-------~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      ||.|+|+ |.+|+.++-.|..+|.  ++.+++++++..+       ...  .........+|.       +.++++|+||
T Consensus        22 KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~adiVV   93 (160)
T d1i0za1          22 KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTANSKIVV   93 (160)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTTCSEEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhcccccEEE
Confidence            7999995 9999999999999984  8999987654321       000  001122222232       2368899999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..||.......+..+.++.|..-...+++.+.+.....-+|.+|
T Consensus        94 itAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          94 VTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99997655556677889999999999999999885334566665

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.25  E-value=7.3e-06  Score=57.48  Aligned_cols=108  Identities=16%  Similarity=0.073  Sum_probs=71.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-----C--eEEEEEcCCCC--C-------CCCCCCCceEEEEccCCCHHHHHHHhcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-----H--SVRALVRRTSD--I-------SGLPSEGALELVYGDVTDYRSLVDACFG   65 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-----~--~V~~~~r~~~~--~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   65 (209)
                      ||.||||+|.||+.++-.|++.+     .  .+.+++.....  +       ..... .....+.. -++   ..+.+++
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~-~~~---~~~~~~~  100 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSI-GID---PYEVFED  100 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEE-ESC---HHHHTTT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCccc-ccc---chhhccC
Confidence            69999999999999999987643     1  34444433221  0       11111 11221111 112   2467899


Q ss_pred             cCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCc-cEEEEEc
Q 028444           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTS  114 (209)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~i~~s  114 (209)
                      +|+||-.||..+....+..+.++.|..-...+.+++.+.... .+++.+|
T Consensus       101 aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         101 VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            999999999877666777889999999999999999986432 3455554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.23  E-value=9.3e-07  Score=61.57  Aligned_cols=87  Identities=20%  Similarity=0.258  Sum_probs=55.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      |||.|+| .|.+|+.+++.|.+.|++|++.+|+++..+...+...+....-+       .++++++|+||-+..      
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~-------~~~~~~~DiIilavp------   66 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD-------LSLLQTAKIIFLCTP------   66 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC-------GGGGTTCSEEEECSC------
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeee-------cccccccccccccCc------
Confidence            9999998 59999999999999999999999976543322221111111111       235688998886543      


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEE
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKII  111 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i  111 (209)
                                ......+++.+.+....+.+|
T Consensus        67 ----------~~~~~~vl~~l~~~l~~~~iv   87 (165)
T d2f1ka2          67 ----------IQLILPTLEKLIPHLSPTAIV   87 (165)
T ss_dssp             ----------HHHHHHHHHHHGGGSCTTCEE
T ss_pred             ----------Hhhhhhhhhhhhhhcccccce
Confidence                      223455666666654334433

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.17  E-value=3.7e-06  Score=57.87  Aligned_cols=110  Identities=18%  Similarity=0.080  Sum_probs=70.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-------eEEEEEcCCCCC--CCC------CCCCceEEEEccCCCHHHHHHHhcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDI--SGL------PSEGALELVYGDVTDYRSLVDACFG   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-------~V~~~~r~~~~~--~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~   65 (209)
                      |||.|+||+|.+|+.++-.|++.+.       ++.+++.+....  +.+      ........+..  ++  .....+++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~--~~~~~~~~   79 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TD--KEEIAFKD   79 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ES--CHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Cc--ccccccCC
Confidence            6999999999999999998876541       344444332210  000      00012222221  11  12456789


Q ss_pred             cCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCcc-EEEEEc
Q 028444           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTS  114 (209)
Q Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~s  114 (209)
                      +|+||-+||.......+..+.++.|..-...+.+.+.+..+.. .+|.+|
T Consensus        80 ~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            9999999998766556667789999999999999998763333 344454

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=4.3e-06  Score=57.71  Aligned_cols=105  Identities=18%  Similarity=0.131  Sum_probs=73.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCC-------CCC-C-CCceEEEEccCCCHHHHHHHhcCcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------GLP-S-EGALELVYGDVTDYRSLVDACFGCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~-------~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   70 (209)
                      ||.|+|+ |.+|..++..|..+|  .++.++++++++++       ... . .........|.       +.++++|+||
T Consensus        21 KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~adivv   92 (159)
T d2ldxa1          21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANSKLVI   92 (159)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTEEEEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccccEEE
Confidence            7999995 999999999999887  47999987754221       000 0 01222223332       2457899999


Q ss_pred             EcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..||.......+..+.++.|+.-...+.+.+.+......++.+|
T Consensus        93 itag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          93 ITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             ECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             EecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            99997655556667789999999999999888875444566665

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.10  E-value=2e-06  Score=58.68  Aligned_cols=106  Identities=19%  Similarity=0.188  Sum_probs=69.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCCCCCC----C----C-CCCceEEEEccCCCHHHHHHHhcCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----L----P-SEGALELVYGDVTDYRSLVDACFGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~~~~~----~----~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   69 (209)
                      .||.|+| +|.+|+.++-.|+.+|  .++.++++++++++.    +    . ..........|.       +.++++|+|
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV   73 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence            4899999 5999999999998887  588888876553211    0    0 001223333332       245889999


Q ss_pred             EEcCccCCCC----CCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           70 FHTAALVEPW----LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        70 i~~a~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |-+||.....    ..+..+.++.|..-...+.+.+++.....-+|.+|
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999964321    12334568889999999999998874333455554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=3.7e-07  Score=63.51  Aligned_cols=36  Identities=44%  Similarity=0.553  Sum_probs=33.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      |||+|+|+ |.||..++..|.+.|++|.++.|++...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            99999997 9999999999999999999999987644

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.02  E-value=7.7e-05  Score=50.48  Aligned_cols=95  Identities=13%  Similarity=0.073  Sum_probs=54.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC----CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |||.|.||||++|+.+++.|+++.    .++..++.+...-+.. ...+-.....+..+.    ..++++|+++-|.+. 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-~~~~~~~~~~~~~~~----~~~~~~DvvF~alp~-   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-NFGKDAGMLHDAFDI----ESLKQLDAVITCQGG-   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-CSSSCCCBCEETTCH----HHHTTCSEEEECSCH-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-ccCCcceeeecccch----hhhccccEEEEecCc-
Confidence            899999999999999999887643    3555554332211111 100111111122333    335789999988762 


Q ss_pred             CCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                                     .-+..+...+.+.+....+|-.||.
T Consensus        75 ---------------~~s~~~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          75 ---------------SYTEKVYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             ---------------HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred             ---------------hHHHHHhHHHHHcCCceEEEeCCcc
Confidence                           1144555666665422357777774

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.94  E-value=2.3e-06  Score=60.27  Aligned_cols=97  Identities=15%  Similarity=0.036  Sum_probs=60.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-------CceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |||.|+|+ |-+|.+++..|.++|++|.+++|++.+.+.....       ...+..........+..++++++|+||.+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            68999996 9999999999999999999999975433221110       011111111111122456788999999774


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      ..                .....+++.++++.....+|.++
T Consensus        81 ~~----------------~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          81 PA----------------IHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             CG----------------GGHHHHHHHHGGGCCTTCEEEES
T ss_pred             ch----------------hHHHHHHHHhhhccCCCCEEEEe
Confidence            31                02455677777775555555544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.93  E-value=2.8e-06  Score=59.48  Aligned_cols=71  Identities=20%  Similarity=0.192  Sum_probs=50.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +|+|+||+|.+|...++.+...|.+|+++++++++.+...+. +++.+ .|..+........+++|+|+++.|
T Consensus        30 ~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~l-Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          30 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL-GAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT-TCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             EEEEEeccccchhhhhhhhccccccccccccccccccccccc-cccee-eehhhhhhhhhccccccccccccc
Confidence            699999999999999999989999999999876654432221 33332 244443333334568999999876

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=6e-05  Score=51.03  Aligned_cols=68  Identities=12%  Similarity=0.068  Sum_probs=41.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC----CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ||.|.||||++|+.+++.|+++.    .+++.+.++.......... .-.....++.+.+    .++++|+++.+++
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-~~~~~~~~~~~~~----~~~~~DivF~a~~   74 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDLE----ALKALDIIVTCQG   74 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-TCCCBCEETTCHH----HHHTCSEEEECSC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-CCceeeecccchh----hhhcCcEEEEecC
Confidence            79999999999999999888764    3566665543322221110 1111122333432    3578999998886

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.88  E-value=6.5e-06  Score=58.08  Aligned_cols=72  Identities=19%  Similarity=0.274  Sum_probs=49.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEE--EccCCCHHHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV--YGDVTDYRSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~Dl~~~~~~~~~~--~~~d~vi~~a~   74 (209)
                      +|+|+||+|.+|.+.++.....|.+|+++++++++.+.+... +...+  .-|-...+.+.+..  .++|+|+++.|
T Consensus        32 ~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~-Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          32 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI-GFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh-hhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            699999999999999999999999999999876644332222 22222  22322334444333  36999999987

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.87  E-value=2e-05  Score=55.51  Aligned_cols=99  Identities=16%  Similarity=0.147  Sum_probs=61.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC--CC-----CCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--IS-----GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~--~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |||.|.| +|-.|.+++..|.++|++|.+..|..++  .+     +............++.-.+++.++++++|+||.+-
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            9999999 5999999999999999999999884321  00     00000011111112222455677889999998765


Q ss_pred             ccCCCCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                      ..                .+...+++.+.+....+.+|.++..
T Consensus        80 ps----------------~~~~~~~~~l~~~l~~~~ii~~tkg  106 (180)
T d1txga2          80 ST----------------DGVLPVMSRILPYLKDQYIVLISKG  106 (180)
T ss_dssp             CG----------------GGHHHHHHHHTTTCCSCEEEECCCS
T ss_pred             ch----------------hhhHHHHHhhccccccceecccccC
Confidence            31                1244566666666444555555443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.85  E-value=5.4e-05  Score=51.50  Aligned_cols=34  Identities=32%  Similarity=0.472  Sum_probs=31.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      ||.|+||.|.+|+.+++.|.+.||+|.+.+|+..
T Consensus        11 kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2          11 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             eEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            7999999999999999999999999999988643

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.83  E-value=2.8e-05  Score=55.67  Aligned_cols=35  Identities=29%  Similarity=0.483  Sum_probs=31.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      |||.|+| .|++|..++..|++.|++|++++.++.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            9999997 7999999999999999999999887554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.77  E-value=2.1e-06  Score=59.41  Aligned_cols=68  Identities=25%  Similarity=0.338  Sum_probs=50.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.+|+.+++.|.+.|. ++++..|+.++...+....+..     ..+.+++.+.+.++|+||.+.+.
T Consensus        26 ~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-----~~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          26 TVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-----AVRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-----ECCGGGHHHHHHTCSEEEECCSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-----cccchhHHHHhccCCEEEEecCC
Confidence            7999996 9999999999999997 6888888766554333221222     23455777788999999999774

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=9.5e-05  Score=53.69  Aligned_cols=70  Identities=17%  Similarity=0.190  Sum_probs=49.9

Q ss_pred             CEEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHH----H
Q 028444            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----V   60 (209)
Q Consensus         1 m~ilItG~----------------~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~----~   60 (209)
                      |+||||+|                ||..|.+|++++..+|++|+++.-....  ..+  .++..+..  ...+++    .
T Consensus         7 ~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~--~~p--~~~~~~~~--~t~~~m~~~~~   80 (223)
T d1u7za_           7 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL--PTP--PFVKRVDV--MTALEMEAAVN   80 (223)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC--CCC--TTEEEEEC--CSHHHHHHHHH
T ss_pred             CEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc--Ccc--ccccccee--hhhHHHHHHHH
Confidence            46778776                7999999999999999999998765432  111  25555543  344443    3


Q ss_pred             HHhcCcCEEEEcCccC
Q 028444           61 DACFGCHVIFHTAALV   76 (209)
Q Consensus        61 ~~~~~~d~vi~~a~~~   76 (209)
                      +.+.+.|++|++|+..
T Consensus        81 ~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          81 ASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHGGGCSEEEECCBCC
T ss_pred             hhhccceeEeeeechh
Confidence            4456899999999974

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.73  E-value=9.3e-06  Score=57.03  Aligned_cols=71  Identities=20%  Similarity=0.202  Sum_probs=46.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH-HHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~--~~~d~vi~~a~   74 (209)
                      +|||+||+|++|...++-....|.+|+.+++++++.+..... +...+. |-++. ++.....  +++|+|+.+.|
T Consensus        34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l-Ga~~vi-~~~~~~~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL-GAKEVL-AREDVMAERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT-TCSEEE-ECC---------CCSCCEEEEEECST
T ss_pred             EEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc-ccceee-ecchhHHHHHHHhhccCcCEEEEcCC
Confidence            599999999999999999889999999999987765433222 222221 22221 2222222  36899999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=6.5e-06  Score=57.66  Aligned_cols=71  Identities=18%  Similarity=0.171  Sum_probs=49.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHH---HHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV---DAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~--~~~d~vi~~a~   74 (209)
                      +|+|+||+|.+|...++.+...|.+|+++++++++.+.+.+. ++..+ .|.++.+..+   +..  +++|+++.+.|
T Consensus        31 ~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~-Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          31 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             EEEEEeccccccccccccccccCccccccccccccccccccc-Ccccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence            699999999999999999999999999999876543322221 33322 2555543333   332  25899999877

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=1.8e-05  Score=47.51  Aligned_cols=36  Identities=39%  Similarity=0.430  Sum_probs=32.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      ++++|+||+|.+|...++.+...|++|+++++++++
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k   68 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence            369999999999999999888999999999987664

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.69  E-value=2.5e-06  Score=59.18  Aligned_cols=65  Identities=25%  Similarity=0.318  Sum_probs=47.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |||-|+| .|-+|+.+++.|+++|++|++.+|++++.+.+.+. +...    ..+   ..++++++|+||-|-.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~~----~~~---~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAET----AST---AKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHh-hhhh----ccc---HHHHHhCCCeEEEEcC
Confidence            8999998 69999999999999999999999987654443322 2221    122   3455677898887753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=3.4e-05  Score=54.34  Aligned_cols=73  Identities=12%  Similarity=0.173  Sum_probs=56.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCC-------CCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      +|+|.|+ |+.|++++..|.+.|. ++++..|++++.+++.       ..........|+.+.+.+.+.+.++|+|||+.
T Consensus        20 ~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN~T   98 (182)
T d1vi2a1          20 TMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGT   98 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred             EEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceecccc
Confidence            6899995 8999999999999995 7888888876543211       11234455678999999988899999999997


Q ss_pred             cc
Q 028444           74 AL   75 (209)
Q Consensus        74 ~~   75 (209)
                      ..
T Consensus        99 p~  100 (182)
T d1vi2a1          99 KV  100 (182)
T ss_dssp             ST
T ss_pred             CC
Confidence            64

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=2.7e-05  Score=53.19  Aligned_cols=71  Identities=20%  Similarity=0.238  Sum_probs=55.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC----CCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI----SGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~   74 (209)
                      +++|.|. |-+|+.+++.|.++|++|+++..++++.    .... ..++.++.+|.+|++.++++- +++|.||-+..
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~-~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh-cCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            3788885 8999999999999999999998765421    1111 137999999999999887754 57898886643

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.55  E-value=0.00011  Score=49.53  Aligned_cols=33  Identities=27%  Similarity=0.452  Sum_probs=26.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRR   33 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~~r~   33 (209)
                      |+|.|.||||++|+.+++.|.+++   .++..+..+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            799999999999999999997554   467766543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.52  E-value=3.6e-06  Score=57.75  Aligned_cols=65  Identities=15%  Similarity=0.124  Sum_probs=46.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a   73 (209)
                      |||.++| +|-+|+++++.|++.|+++++..|+.++.+++.+..++.+    ..+   ..++++++|+|+-+-
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~----~~~---~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMS---HQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSS---HHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee----ech---hhhhhhccceeeeec
Confidence            8999998 7999999999999999999999888665443322112211    112   345567899999774

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.50  E-value=0.00016  Score=49.90  Aligned_cols=71  Identities=17%  Similarity=0.096  Sum_probs=47.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCce-EEEEccCC--CHHHHHHHh-----cCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYGDVT--DYRSLVDAC-----FGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~Dl~--~~~~~~~~~-----~~~d~vi~~a   73 (209)
                      +++|+| +|.||...++.+...|.+|+++++++.+.+...+. +. ..+..|-.  +.+.+.+.+     .++|+||.++
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~-ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~  106 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC-GADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCS  106 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-TCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECS
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc-CCcEEEeccccccccchhhhhhhcccccCCceeeecC
Confidence            689997 79999999999989999999999987654322221 22 22222322  333333333     3589999998


Q ss_pred             c
Q 028444           74 A   74 (209)
Q Consensus        74 ~   74 (209)
                      |
T Consensus       107 g  107 (170)
T d1e3ja2         107 G  107 (170)
T ss_dssp             C
T ss_pred             C
Confidence            8

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=1.2e-05  Score=56.51  Aligned_cols=71  Identities=25%  Similarity=0.162  Sum_probs=45.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~   74 (209)
                      ++||+||+|++|...++.....|++|+++++++++.+.+.+ .+...+. |..+.+..+.+. ...|.++++.+
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~-lGad~vi-~~~~~~~~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-LGASRVL-PRDEFAESRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTEEEEE-EGGGSSSCCSSCCCCEEEEEESSC
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh-hcccccc-ccccHHHHHHHHhhcCCeeEEEcc
Confidence            58999999999999999998999999999998765433222 1333332 222222111111 13577777765

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=7e-06  Score=57.65  Aligned_cols=71  Identities=14%  Similarity=0.126  Sum_probs=50.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHhc--CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~d~vi~~a~   74 (209)
                      +|+|+||+|.+|..+++.....|.+|+++++++++.+.+.+. ++..+ .|.++++   .+.++-.  ++|+|+.+.+
T Consensus        31 ~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l-Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          31 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQV-INYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             EEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc-CCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            699999999999999998888999999999987754432222 33322 2555533   3333332  5899999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.49  E-value=3.1e-05  Score=54.35  Aligned_cols=71  Identities=18%  Similarity=0.305  Sum_probs=50.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~--~~~d~vi~~a~   74 (209)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+.+ .++..+ .|..++   +.+.+..  +++|+++.+.|
T Consensus        28 ~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          28 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             EEEEECCCCCcccccchhhccccccceeeeccccccccccc-cccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            69999999999999999888889999999987654433322 244433 244443   3344433  36999999987

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00033  Score=44.91  Aligned_cols=64  Identities=22%  Similarity=0.192  Sum_probs=51.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCceEEEEccCCCHHHHHHHhc--CcCEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACF--GCHVIF   70 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vi   70 (209)
                      ||.|.| +|.+|+-++....+.|+++++++.+++... ..    .-.++.+|..|.+.+.++..  ++|+|-
T Consensus        13 kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v----a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          13 RVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV----AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             EEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG----SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc----CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            689999 699999999999999999999998755321 11    23678899999999988774  578885

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.46  E-value=2e-05  Score=54.72  Aligned_cols=71  Identities=11%  Similarity=-0.028  Sum_probs=49.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC-CHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++|+|+ |.+|...++.+...|.+|+++++++.+++...+. +...+. |.. +.+..+...++.|+++.+.+.
T Consensus        30 ~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l-Ga~~~i-~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          30 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM-GADHYI-ATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-TCSEEE-EGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             EEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhcc-CCcEEe-eccchHHHHHhhhcccceEEEEecC
Confidence            6899986 9999999988888899999999988765543221 333222 222 233344555678999998764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00015  Score=47.93  Aligned_cols=30  Identities=27%  Similarity=0.420  Sum_probs=27.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL   30 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~   30 (209)
                      |||.|.|++|-+|+.|++.+.++|+++++.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            899999999999999999999999988764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.42  E-value=9.3e-05  Score=51.21  Aligned_cols=35  Identities=20%  Similarity=0.526  Sum_probs=29.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSD   36 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~~~~   36 (209)
                      ++|+|+| .|.||..+++.|.+.|+  +|++.+|+++.
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            1499998 69999999999999996  68888887553

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.42  E-value=1.6e-05  Score=56.23  Aligned_cols=72  Identities=24%  Similarity=0.238  Sum_probs=43.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEE-EEcCCCCCCCCCCCCceEEEEccCCC--H-HHHHHHh-cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDISGLPSEGALELVYGDVTD--Y-RSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~Dl~~--~-~~~~~~~-~~~d~vi~~a~   74 (209)
                      +|||+||+|.+|+..++.....|.++++ +++++++...+....+...+ .|..+  . +.+.++. +++|+|+.+.|
T Consensus        33 tVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v-i~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          33 TMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA-VNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             EEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE-EETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE-eeccchhHHHHHHHHhccCceEEEecCC
Confidence            5999999999999999988888976555 44443332211111122222 24443  2 2233322 36999999987

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00031  Score=48.55  Aligned_cols=71  Identities=15%  Similarity=0.109  Sum_probs=48.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceE-EEEccCCCHHHHHHHh-----cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALE-LVYGDVTDYRSLVDAC-----FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~-----~~~d~vi~~a~   74 (209)
                      +++|+|+ |.+|...++.+...|. +|+++++++.+++...+. +.+ .+..+-.+..+..+.+     .++|++|.+.|
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~-Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G  106 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI-GADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG  106 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSC
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh-CCcccccccccccccccccccccCCCCceEEEeccC
Confidence            5889875 9999999999999997 799998887655432221 332 3333444554444433     36899999988

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.36  E-value=1.9e-05  Score=54.59  Aligned_cols=64  Identities=27%  Similarity=0.366  Sum_probs=44.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +|-++| .|-+|++++++|+++||+|.+.+|++.+.+.+... +       ........+++..+|+++-+-.
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~-~-------~~~~~~~~e~~~~~diii~~v~   66 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-G-------ASAARSARDAVQGADVVISMLP   66 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-T-------CEECSSHHHHHTSCSEEEECCS
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh-h-------ccccchhhhhccccCeeeeccc
Confidence            789997 79999999999999999999999886643332221 1       1111223456677888876654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.34  E-value=1.3e-05  Score=54.86  Aligned_cols=65  Identities=14%  Similarity=0.242  Sum_probs=44.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |||-|+| .|.+|+.+++.|+++|++|+..+++..+....... +....       +...++++++|+||-+-.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~-------~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-TVGVT-------ETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-HHTCE-------ECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-ccccc-------ccHHHHHhhcCeEEEEec
Confidence            8999997 69999999999999999998887765432211110 11111       112456788999987754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.31  E-value=2.6e-05  Score=53.23  Aligned_cols=63  Identities=19%  Similarity=0.259  Sum_probs=44.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~   72 (209)
                      |||.++|+ |-+|+++++.|++.| ++|++.+|++++.+.+.++.++... -|..       .+.++|+||-+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-------~v~~~Div~la   64 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-------ELHSDDVLILA   64 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-------CCCTTSEEEEC
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-------cccccceEEEe
Confidence            89999985 999999999998887 9999999987655444332234332 1221       14567888866

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=6.3e-05  Score=52.08  Aligned_cols=71  Identities=18%  Similarity=0.113  Sum_probs=52.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|.|+ |.||...++.+...|.+++++++++.+.+...+ .+...+ .|..+.+......+++|++|.+.+.
T Consensus        33 ~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~-lGad~~-i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          33 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEV-VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             EEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhc-cCCcEE-EECchhhHHHHhcCCCceeeeeeec
Confidence            6899985 999999999888899999999887665432211 133322 3667777666667789999999873

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.22  E-value=0.00012  Score=51.03  Aligned_cols=71  Identities=17%  Similarity=0.160  Sum_probs=49.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCC-ceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +|-++| -|-+|+.++++|++.|++|++.+|++++.+++.+.. ...... -....+++.+.+..+|.++-+..
T Consensus         4 nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           4 DIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEEEECSC
T ss_pred             cEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccccc-chhhhhhhhhhhcccceEEEecC
Confidence            477888 699999999999999999999999876544322110 000001 13466777788888888887643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.15  E-value=0.00015  Score=50.68  Aligned_cols=71  Identities=15%  Similarity=0.139  Sum_probs=46.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCC--CHHHH----HHHh--cCcCEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVT--DYRSL----VDAC--FGCHVIFHT   72 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~--~~~~~----~~~~--~~~d~vi~~   72 (209)
                      +|+|+|+ |.||...++.+...|. +|+++++++.+.+...+. +...+ .|..  +..+.    .+..  .++|+||.+
T Consensus        31 ~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~~v-i~~~~~~~~~~~~~i~~~~~~~g~Dvvid~  107 (182)
T d1vj0a2          31 TVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GADLT-LNRRETSVEERRKAIMDITHGRGADFILEA  107 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TCSEE-EETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred             EEEEECC-Cccchhheecccccccccccccccccccccccccc-cceEE-EeccccchHHHHHHHHHhhCCCCceEEeec
Confidence            6899986 8999999999999997 799999887654322211 33222 1333  32222    2222  258999999


Q ss_pred             Ccc
Q 028444           73 AAL   75 (209)
Q Consensus        73 a~~   75 (209)
                      .|.
T Consensus       108 vG~  110 (182)
T d1vj0a2         108 TGD  110 (182)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            873

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.001  Score=41.07  Aligned_cols=67  Identities=19%  Similarity=0.317  Sum_probs=46.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC--CCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++|+|.|. |.-|.++++.|.++|++|++.+.+....  +.+..  ...+..+... .    ..+.++|.||-.-|+
T Consensus         6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~--~~~~~~~~~~-~----~~~~~~d~vi~SPGi   74 (93)
T d2jfga1           6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE--AVERHTGSLN-D----EWLMAADLIVASPGI   74 (93)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT--TSCEEESBCC-H----HHHHHCSEEEECTTS
T ss_pred             CEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh--ccceeecccc-h----hhhccCCEEEECCCC
Confidence            36999996 8889999999999999999999865422  22222  4445544432 2    235677999977665

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.05  E-value=5.3e-05  Score=53.35  Aligned_cols=31  Identities=29%  Similarity=0.581  Sum_probs=26.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALV   31 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~   31 (209)
                      +||.|.||||+.|+.+++.|.++. .++..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            479999999999999999998875 5666554

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.0018  Score=45.37  Aligned_cols=62  Identities=19%  Similarity=0.052  Sum_probs=44.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|.||+.+++.+..-|.+|+..++.......     ..  ..  .   +++.++++.+|+|+.+...
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-----~~--~~--~---~~l~ell~~sDii~i~~pl  106 (188)
T d1sc6a1          45 KKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-----NA--TQ--V---QHLSDLLNMSDVVSLHVPE  106 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-----TC--EE--C---SCHHHHHHHCSEEEECCCS
T ss_pred             eEEEEee-cccchhhhhhhcccccceEeeccccccchhh-----hh--hh--h---hhHHHHHhhccceeecccC
Confidence            3678886 8999999999999999999999875432211     11  11  1   2456778889988877664

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=97.00  E-value=0.0014  Score=45.68  Aligned_cols=60  Identities=25%  Similarity=0.233  Sum_probs=45.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|-||+.+++.+..-|.+|++.+|...+...              .-.+++.++++.+|+|+.+...
T Consensus        43 k~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~--------------~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          43 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW--------------RFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS--------------CCBSCSHHHHTTCSEEEECCCC
T ss_pred             ceEEEec-cccccccceeeeeccccccccccccccccce--------------eeeechhhhhhccchhhccccc
Confidence            4788999 6899999999999999999999887543211              1112456789999999877654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.94  E-value=0.00021  Score=47.08  Aligned_cols=68  Identities=18%  Similarity=0.161  Sum_probs=51.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHH-hcCcCEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi~~a   73 (209)
                      .++|.| .|-+|+.+++.|.  +++|.++..++.+.+.... .++.++.+|.++++.+.++ +.+++.+|-+.
T Consensus         2 HivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           2 HVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             EEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            478888 5889999999984  6678888877664433322 4789999999999988875 35788888554

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.93  E-value=7.7e-05  Score=51.70  Aligned_cols=64  Identities=13%  Similarity=0.241  Sum_probs=43.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|.|+ |+.+++++..|.+.|. +|.++.|+.++.+.+....+...+. +..        ..++|+|||+...
T Consensus        19 ~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~-~~~--------~~~~DliINaTpi   83 (167)
T d1npya1          19 KVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN-SLE--------NQQADILVNVTSI   83 (167)
T ss_dssp             CEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES-CCT--------TCCCSEEEECSST
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhh-ccc--------ccchhhheecccc
Confidence            6999995 9999999999999996 7889889866544332211222221 111        2467999988654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.91  E-value=0.00021  Score=50.45  Aligned_cols=71  Identities=21%  Similarity=0.227  Sum_probs=45.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ||.|.| +|-.|.+++..|.++|++|++..|+++..+.+       .-.+++.+ .-++.-..++.++++++|+||.+-.
T Consensus         9 KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iiiavP   86 (189)
T d1n1ea2           9 KAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILFVIP   86 (189)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEECSC
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEEcCc
Confidence            699999 59999999999999999999999875422110       00011110 0011111235677889999987643

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.90  E-value=0.00048  Score=47.54  Aligned_cols=38  Identities=32%  Similarity=0.376  Sum_probs=33.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~   39 (209)
                      +|||+||+|.+|.+.++.....|.+|+++.+++++.+.
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~   63 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY   63 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH
Confidence            59999999999999999888889999999998776543

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0001  Score=51.13  Aligned_cols=67  Identities=18%  Similarity=0.284  Sum_probs=45.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++|+|.| +|+.+++++-.|.+.|.+|+++.|+.++.+.+..    ...++.+  +..+.     ...++|+|||+...
T Consensus        19 k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~-----~~~~~dliIN~Tp~   89 (170)
T d1nyta1          19 LRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDEL-----EGHEFDLIINATSS   89 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGG-----TTCCCSEEEECCSC
T ss_pred             CEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccc-----cccccceeeccccc
Confidence            3799999 5999999999999999999999998765433211    1122222  22211     12568999999754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.82  E-value=0.00016  Score=49.79  Aligned_cols=71  Identities=15%  Similarity=0.222  Sum_probs=55.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      +++|.| .|-.|..-++.....|.+|++++.+.++++++...  ..++.   -..+.+.+.+.++++|+||.++-+.
T Consensus        34 ~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~---~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          34 KVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             EEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccccee---ehhhhhhHHHhhccCcEEEEeeecC
Confidence            689999 59999999999999999999999987655433221  12333   3557888999999999999998764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.0007  Score=46.42  Aligned_cols=82  Identities=21%  Similarity=0.299  Sum_probs=49.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC-CCeEEEEE-cCCCC-CCC----CCCC--CceEEEEccCCCHHHHHHHhcCcCEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALV-RRTSD-ISG----LPSE--GALELVYGDVTDYRSLVDACFGCHVIFH   71 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~-r~~~~-~~~----~~~~--~~~~~~~~Dl~~~~~~~~~~~~~d~vi~   71 (209)
                      |||.|.|++|-+|+++++.+.+. ++++++.. |.... ...    +...  .++ .+..|+      ...++.+|++|.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~-~~~~~~------~~~~~~~DViID   77 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGV-TVQSSL------DAVKDDFDVFID   77 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSC-CEESCS------TTTTTSCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCc-eeeccH------HHHhcccceEEE
Confidence            68999999999999999988765 56766544 33221 111    0000  111 112222      335678999997


Q ss_pred             cCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC
Q 028444           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK  105 (209)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  105 (209)
                      ...                -.++...++.|.+.+
T Consensus        78 Fs~----------------p~~~~~~~~~a~~~~   95 (162)
T d1diha1          78 FTR----------------PEGTLNHLAFCRQHG   95 (162)
T ss_dssp             CSC----------------HHHHHHHHHHHHHTT
T ss_pred             ecc----------------HHHHHHHHHHHHhcc
Confidence            744                234667778888773

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.78  E-value=0.00059  Score=47.39  Aligned_cols=36  Identities=28%  Similarity=0.422  Sum_probs=32.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      |||-|+| .|-+|.+++++|+++|++|.+.+|+.++.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            8999998 89999999999999999999999976544

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.77  E-value=0.0011  Score=47.00  Aligned_cols=63  Identities=17%  Similarity=-0.002  Sum_probs=44.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|.||+.+++.|..-|.+|++.++........           +....+++.++++.+|+|+.+...
T Consensus        44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-----------~~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-----------KGYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-----------TTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             CeEEEec-ccccchhHHHhHhhhcccccccCccccccccc-----------ceeeeccccccccccccccccCCc
Confidence            3688988 89999999999999999999987653321110           111223466778889988877653

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.76  E-value=0.00034  Score=48.20  Aligned_cols=72  Identities=14%  Similarity=0.178  Sum_probs=46.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCce-EEEEccCCCH-HHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGAL-ELVYGDVTDY-RSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~Dl~~~-~~~~~~~--~~~d~vi~~a~   74 (209)
                      +++|+|++|.+|...++.+...| .+|+++++++.+.+...+. +. ..+..+-.|. +.+.+..  .++|+++.+++
T Consensus        30 ~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~-Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g  106 (170)
T d1jvba2          30 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GADYVINASMQDPLAEIRRITESKGVDAVIDLNN  106 (170)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred             EEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc-CCceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence            68999999999999999888888 5888888776554322211 22 2232222222 2233322  35899999987

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.73  E-value=0.0011  Score=42.47  Aligned_cols=90  Identities=19%  Similarity=0.200  Sum_probs=59.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (209)
                      +|+|+| +|-+|.+-++.|++.|.+|++++....+ ...+....++++++.+..+.     -+.+++.|+.+.+-     
T Consensus        14 ~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at~d-----   82 (113)
T d1pjqa1          14 DCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAATDD-----   82 (113)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECCSC-----
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHH-----HhCCCcEEeecCCC-----
Confidence            699999 5899999999999999999998765432 11122234688888776643     25677877755431     


Q ss_pred             CCccchhhhHHHHHHHHHHHHHhcCCccEEEEEcc
Q 028444           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (209)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss  115 (209)
                                -.-...+.+.+++.+   .+|++..
T Consensus        83 ----------~~~n~~i~~~a~~~~---ilVNv~D  104 (113)
T d1pjqa1          83 ----------DTVNQRVSDAAESRR---IFCNVVD  104 (113)
T ss_dssp             ----------HHHHHHHHHHHHHTT---CEEEETT
T ss_pred             ----------HHHHHHHHHHHHHcC---CEEEeCC
Confidence                      111335666777653   5677653

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.64  E-value=0.00033  Score=48.59  Aligned_cols=66  Identities=17%  Similarity=0.202  Sum_probs=46.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +|+|.| +|+.+++++..|.+.+.+|+++.|+.++.+.+..    ...+..+..|-.       .+..+|+|||+...
T Consensus        20 ~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~tp~   89 (171)
T d1p77a1          20 HVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINATSA   89 (171)
T ss_dssp             EEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECCCC
T ss_pred             EEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeecccc
Confidence            688888 6889999999999888999999998765443211    112334443321       24678999999764

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.62  E-value=0.00099  Score=46.36  Aligned_cols=31  Identities=32%  Similarity=0.573  Sum_probs=26.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALV   31 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~   31 (209)
                      |||.|.||||++|+.+++.|.++. +++..+.
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            389999999999999999999874 6776554

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.62  E-value=0.00076  Score=41.96  Aligned_cols=66  Identities=18%  Similarity=0.264  Sum_probs=45.4

Q ss_pred             EEEEEcCCChhH-HHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLG-GRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG-~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++.+.|- |++| ++||+.|.++|++|.+.++.... .+.+.+ .++.+..++-.  +    .+.++|.||...+.
T Consensus        10 ~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-~Gi~v~~g~~~--~----~i~~~d~vV~S~AI   77 (96)
T d1p3da1          10 QIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-AGAKIYIGHAE--E----HIEGASVVVVSSAI   77 (96)
T ss_dssp             EEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-TTCEEEESCCG--G----GGTTCSEEEECTTS
T ss_pred             EEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-CCCeEEECCcc--c----cCCCCCEEEECCCc
Confidence            6888885 5566 88999999999999999876432 112222 36766665432  1    24678999988876

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.57  E-value=0.0015  Score=46.07  Aligned_cols=65  Identities=18%  Similarity=0.111  Sum_probs=44.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      +++.|.| .|-||+.+++.|..-|++|.+.++.......  .  .     ..+...+++.++++.+|+|+.+...
T Consensus        50 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~--~-----~~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          50 ETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--R--A-----LGLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--H--H-----HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             ceEEEec-cccccccceeeeeccccceeeccCcccccch--h--h-----hccccccchhhccccCCEEEEeecc
Confidence            3688887 7999999999999999999998875432110  0  0     0111223456778889988766653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.50  E-value=0.0027  Score=44.92  Aligned_cols=61  Identities=20%  Similarity=0.072  Sum_probs=43.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++.|.| .|-||+.+++.|..-|.+|++.++...+....    .+.     .   .++.++++.+|+|+.+..
T Consensus        46 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~----~~~-----~---~~l~~l~~~~D~v~~~~p  106 (199)
T d1dxya1          46 QTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHP----DFD-----Y---VSLEDLFKQSDVIDLHVP  106 (199)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCCT----TCE-----E---CCHHHHHHHCSEEEECCC
T ss_pred             eeeeeee-cccccccccccccccceeeeccCCccchhhhc----chh-----H---HHHHHHHHhcccceeeec
Confidence            3688888 79999999999999999999998765432211    111     1   235667788998876654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.42  E-value=0.0039  Score=40.31  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=30.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|++|-.+|..|.+.|.+|+++.|++.-+
T Consensus        32 ~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l   66 (121)
T d1d7ya2          32 RLLIVG-GGVIGLELAATARTAGVHVSLVETQPRLM   66 (121)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred             eEEEEC-cchhHHHHHHHhhcccceEEEEeeccccc
Confidence            688888 59999999999999999999999876543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.41  E-value=0.0018  Score=44.86  Aligned_cols=32  Identities=25%  Similarity=0.376  Sum_probs=26.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVR   32 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r   32 (209)
                      |||.|.||||++|+.+++.|.++. .++..+..
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s   34 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   34 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence            389999999999999999998865 56666653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.33  E-value=0.00088  Score=46.33  Aligned_cols=72  Identities=11%  Similarity=0.073  Sum_probs=45.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEE--ccCCC-HHHHHHHh--cCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVY--GDVTD-YRSLVDAC--FGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~--~Dl~~-~~~~~~~~--~~~d~vi~~a~~   75 (209)
                      +|+|.|+ |++|...+..+...| .+|+++++++.+.+...+. +.....  .|-.+ .+...+..  .++|++|.+.|.
T Consensus        31 tVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~-Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~  108 (176)
T d2jhfa2          31 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGR  108 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred             EEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh-CCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCCc
Confidence            6899998 679999999888888 5888888877664432222 222222  12222 22222222  369999999883

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.30  E-value=0.005  Score=39.36  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=31.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|+||-.+|..|.+.|.+|+++.|.+.-+
T Consensus        24 ~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~il   58 (117)
T d1ebda2          24 SLVVIG-GGYIGIELGTAYANFGTKVTILEGAGEIL   58 (117)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred             eEEEEC-CCccceeeeeeecccccEEEEEEecceec
Confidence            688998 59999999999999999999999876543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.28  E-value=0.0019  Score=44.07  Aligned_cols=70  Identities=19%  Similarity=0.140  Sum_probs=44.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~d~vi~~a~   74 (209)
                      +|+|.|+ |.||...++.+...|.+|+++++++.+++...+. +.+.+ .|.++.   +.+.+...+.+.+|-+++
T Consensus        30 ~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~-Ga~~~-i~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          30 WVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKL-GASLT-VNARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-TCSEE-EETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             EEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhcc-Ccccc-ccccchhHHHHHHHhhcCCcccccccc
Confidence            6889875 9999999998888999999999887654432221 33222 233333   233333445666665554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.26  E-value=0.0024  Score=44.19  Aligned_cols=72  Identities=11%  Similarity=0.064  Sum_probs=46.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEE--ccCCC-HHHHHHHh--cCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVY--GDVTD-YRSLVDAC--FGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~--~Dl~~-~~~~~~~~--~~~d~vi~~a~~   75 (209)
                      +|+|+|+ |.+|...++.+...| .+|+++++++++++...+ .+.+.+.  -|-.+ .+.+.+..  .++|++|.+.+.
T Consensus        32 tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          32 TCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGH  109 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSCC
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCCcEEECccccchHHHHHHHHhccccceEEEEeCCc
Confidence            5889985 999999999999999 579999988776543221 1222221  12221 23333333  479999999883

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.26  E-value=0.0017  Score=39.64  Aligned_cols=68  Identities=16%  Similarity=0.215  Sum_probs=46.0

Q ss_pred             CEEEEEcCCChhH-HHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLG-GRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG-~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      |||.++|- |++| ++||+.|.++|++|.+.++...+ .+.+.+ .++.+..+.  +.+    .++++|.||...++.
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~-~Gi~i~~gh--~~~----~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK-LGIPIFVPH--SAD----NWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTCCEESSC--CTT----SCCCCSEEEECTTCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH-CCCeEEeee--ccc----ccCCCCEEEEecCcC
Confidence            89999985 5556 68999999999999999876432 112222 356655442  111    236789999888863

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0029  Score=44.46  Aligned_cols=33  Identities=21%  Similarity=0.438  Sum_probs=30.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      ||.|.|+ |.+|+.++..++..|++|++++++++
T Consensus         6 kvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           6 HVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            7999996 99999999999999999999998865

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.21  E-value=0.0049  Score=39.84  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=31.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|+||-.+|..|.+.|.+|+++.|++.-+
T Consensus        25 ~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~l   59 (122)
T d1v59a2          25 RLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQIG   59 (122)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred             eEEEEC-CCchHHHHHHHHHhhCcceeEEEeccccc
Confidence            688999 59999999999999999999999876543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.20  E-value=0.022  Score=37.08  Aligned_cols=85  Identities=16%  Similarity=0.131  Sum_probs=54.0

Q ss_pred             EEEEEcCC---ChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            2 KILVSGAS---GYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         2 ~ilItG~~---G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      +|.|.|+|   +..|..+.+.|.+.| ++|+.+..+.+...      +...+. ++.|      +-..+|.++-+..   
T Consensus        10 sIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~------G~~~y~-sl~d------lp~~vDlvvi~vp---   73 (129)
T d2csua1          10 GIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ------GVKAYK-SVKD------IPDEIDLAIIVVP---   73 (129)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET------TEECBS-STTS------CSSCCSEEEECSC---
T ss_pred             eEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC------CeEeec-chhh------cCCCCceEEEecC---
Confidence            69999999   889999999987766 68888754322211      222211 3333      3456787775543   


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccc
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~  116 (209)
                                   -..+..+++.+.+. +.+.++.+|+.
T Consensus        74 -------------~~~~~~~~~~~~~~-g~~~~vi~s~G   98 (129)
T d2csua1          74 -------------KRFVKDTLIQCGEK-GVKGVVIITAG   98 (129)
T ss_dssp             -------------HHHHHHHHHHHHHH-TCCEEEECCCS
T ss_pred             -------------hHHhHHHHHHHHHc-CCCEEEEeccc
Confidence                         23356677888777 46676666653

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.18  E-value=0.0013  Score=45.37  Aligned_cols=72  Identities=18%  Similarity=0.154  Sum_probs=44.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi~~a~   74 (209)
                      +++|.| +|.+|...++.+...|. +|+++++++.+++...+....+.+..+-.+.+.+.+..  .++|++|.++|
T Consensus        35 ~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g  109 (172)
T d1h2ba2          35 YVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVG  109 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             EEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecC
Confidence            578887 59999999988877785 66667776654433222222234333322233344433  25899999998

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.023  Score=41.07  Aligned_cols=31  Identities=26%  Similarity=0.336  Sum_probs=26.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~   33 (209)
                      +|+|.| .|++|++++..|+..|. ++++++.+
T Consensus        32 ~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          32 RVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            799999 69999999999999995 77777654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.16  E-value=0.0022  Score=44.82  Aligned_cols=35  Identities=9%  Similarity=0.161  Sum_probs=29.5

Q ss_pred             EEEE-EcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILV-SGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilI-tG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +++| +||+|.+|.+.++.....|.+|+++.|+.+.
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~   66 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN   66 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence            3566 6899999999999888889999999987664

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.14  E-value=0.0021  Score=44.57  Aligned_cols=73  Identities=18%  Similarity=0.160  Sum_probs=51.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccC----------------------CCHHHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV----------------------TDYRSL   59 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl----------------------~~~~~~   59 (209)
                      +++|.| .|-.|.+-++.....|.+|.+++.+..+++++.+. .-.++..+.                      ...+.+
T Consensus        31 ~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l-~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l  108 (183)
T d1l7da1          31 RVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV  108 (183)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT-TCEECCC-----------------------CCHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh-hcceEEEeccccccccccccchhhcCHHHHHHHHHHH
Confidence            689999 49999999999999999999999887765543322 222222111                      124556


Q ss_pred             HHHhcCcCEEEEcCccC
Q 028444           60 VDACFGCHVIFHTAALV   76 (209)
Q Consensus        60 ~~~~~~~d~vi~~a~~~   76 (209)
                      .+.+.++|+||-.+-..
T Consensus       109 ~~~l~~aDlVI~talip  125 (183)
T d1l7da1         109 LKELVKTDIAITTALIP  125 (183)
T ss_dssp             HHHHTTCSEEEECCCCT
T ss_pred             HHHHHhhhhheeeeecC
Confidence            67788999999888764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.14  E-value=0.0081  Score=38.78  Aligned_cols=34  Identities=29%  Similarity=0.459  Sum_probs=30.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +++|.| +|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        32 ~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          32 NVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             EEEEEC-ChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            678887 6999999999999999999999887543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.0057  Score=39.08  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=30.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +++|.| +|++|-.++..|.+.|.+|+++.|.+..
T Consensus        23 ~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          23 RVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             EEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence            688888 5999999999999999999999987653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.13  E-value=0.0058  Score=42.08  Aligned_cols=72  Identities=13%  Similarity=0.042  Sum_probs=44.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceE-EEEccCCC--HHHHHHHh--cCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALE-LVYGDVTD--YRSLVDAC--FGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~--~~~~~~~~--~~~d~vi~~a~~   75 (209)
                      +|+|+| .|.||...++.+...|. .|++.++++.+++...+ .+.. .+...-.+  .+.+.+..  .++|++|.|+|.
T Consensus        31 ~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~  108 (174)
T d1e3ia2          31 TCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT  108 (174)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred             EEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-hCCCcccCCccchhhhhhhHhhhhcCCCcEEEEeccc
Confidence            689997 59999999999999997 56667776665432222 1332 22221111  22222222  479999999983

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.13  E-value=0.00091  Score=46.34  Aligned_cols=71  Identities=10%  Similarity=0.047  Sum_probs=46.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCC---HHHHHHHhc--CcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD---YRSLVDACF--GCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~--~~d~vi~~a~~   75 (209)
                      +|+|.|+ |.||...++.+...|. +|+++++++.+.+...+. ++..+ .|..+   .+.+.+...  ++|++|.++|.
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l-Ga~~~-i~~~~~~~~~~v~~~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY-GATDI-LNYKNGHIEDQVMKLTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH-TCSEE-ECGGGSCHHHHHHHHTTTSCEEEEEECSSC
T ss_pred             EEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh-Ccccc-ccccchhHHHHHHHHhhccCcceEEEccCC
Confidence            5899975 9999999998888896 688888876554322211 22211 23333   333444443  59999999983

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.10  E-value=0.0058  Score=39.18  Aligned_cols=34  Identities=26%  Similarity=0.375  Sum_probs=30.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +++|.| +|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        24 ~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          24 KIGIVG-SGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             EEEEEC-CchHHHHHHHHHHhccccceeeehhccc
Confidence            688888 5999999999999999999999987653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.09  E-value=0.0037  Score=42.20  Aligned_cols=24  Identities=25%  Similarity=0.430  Sum_probs=21.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH   25 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~   25 (209)
                      ||.|.||||++|+.+++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            689999999999999999988864

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.011  Score=40.25  Aligned_cols=54  Identities=20%  Similarity=0.252  Sum_probs=42.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++++|.|-|..+|+.++..|.++|.+|+.......                |      +....+++|+||.++|..
T Consensus        38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------~------l~~~~~~ADivI~a~G~p   91 (166)
T d1b0aa1          38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------N------LRHHVENADLLIVAVGKP   91 (166)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------C------HHHHHHHCSEEEECSCCT
T ss_pred             ceEEEEeccccccHHHHHHHHHhhccccccccccc----------------h------hHHHHhhhhHhhhhccCc
Confidence            47999999999999999999999999987643221                2      234457889999999954

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.08  E-value=0.0043  Score=40.04  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=29.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      +++|.| +|++|-.+|..|.+.|.+|+++.|++.
T Consensus        34 ~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          34 EAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             EEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             cEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            578888 599999999999999999999987644

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.05  E-value=0.0021  Score=45.26  Aligned_cols=71  Identities=13%  Similarity=0.073  Sum_probs=46.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCCCH---HHHHHHhc--CcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~~d~vi~~a~~   75 (209)
                      +|+|.|+ |.||...+..+...|. +|+++++++.+++...+ .+...+. |-.+.   +.+.++..  ++|++|.+.|.
T Consensus        28 tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~vG~  104 (195)
T d1kola2          28 TVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDAVGF  104 (195)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred             EEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-ccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEECccc
Confidence            6899985 9999888887777775 78788877665433222 2444443 33332   33444433  58999999884

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0067  Score=39.29  Aligned_cols=35  Identities=17%  Similarity=0.426  Sum_probs=31.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|+||-.++..|.+.|.+|+++.|++.-+
T Consensus        24 ~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~~l   58 (125)
T d3grsa2          24 RSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDKVL   58 (125)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred             EEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccccc
Confidence            688999 59999999999999999999999976543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.00  E-value=0.0083  Score=38.48  Aligned_cols=34  Identities=26%  Similarity=0.272  Sum_probs=30.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +++|.| +|+||-.+|..|.+.|.+|+++.|++.-
T Consensus        24 ~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          24 KLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             eEEEEC-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            689999 5999999999999999999999987553

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.012  Score=46.33  Aligned_cols=32  Identities=34%  Similarity=0.456  Sum_probs=27.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRR   33 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~   33 (209)
                      +||+|.|+ |++|.++++.|+..|. ++++++.+
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            37999996 7799999999999996 78888764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.98  E-value=0.0031  Score=44.24  Aligned_cols=65  Identities=15%  Similarity=0.009  Sum_probs=43.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++.|.| .|.||+.+++.+..-|.+|...++..........        ......+++.++++.+|+|+.+...
T Consensus        49 tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          49 TLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------YQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             ceEEee-cccchHHHHHHHHhhccccccccccccccchhhc--------ccccccCCHHHHHhhCCeEEecCCC
Confidence            677887 7999999999999999999998765432111000        0111223466788889988766654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.98  E-value=0.0017  Score=44.81  Aligned_cols=70  Identities=16%  Similarity=0.141  Sum_probs=42.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEE-EEcCCCCCCCCCCCCceEEEEccCCCHH---HHHHHhc-CcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF-GCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~-~~d~vi~~a~   74 (209)
                      +|+|+|+ |.||...++.+...|.++++ .++++.+++...+..-.+++  |..+.+   .+.++.. ++|++|.+.|
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid~~G  105 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI--NSKTQDPVAAIKEITDGGVNFALESTG  105 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEE--eCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence            5899986 99999999988888876655 45555443322211112333  333332   2333322 5899999988

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.97  E-value=0.0033  Score=46.13  Aligned_cols=34  Identities=26%  Similarity=0.380  Sum_probs=30.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      |+|+|+|| |.-|-..|.+|.++|++|+++-+++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            89999995 99999999999999999999987643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.94  E-value=0.004  Score=43.38  Aligned_cols=63  Identities=21%  Similarity=0.103  Sum_probs=42.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++.|.| .|.||+++++.+..-|.+|++.++...+.....  ..++        ..++.++++++|+|+.+...
T Consensus        46 ~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~--~~~~--------~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          46 TVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--LGIE--------LLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH--HTCE--------ECCHHHHHHHCSEEEECCCC
T ss_pred             eeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh--cCce--------eccHHHHHhhCCEEEEcCCC
Confidence            566766 799999999999999999999887644221100  0111        12356778889988776653

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.90  E-value=0.0012  Score=45.41  Aligned_cols=70  Identities=11%  Similarity=0.024  Sum_probs=41.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCCCCCCCCCCCceEEEEccCC----CHHHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPSEGALELVYGDVT----DYRSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~Dl~----~~~~~~~~~--~~~d~vi~~a~   74 (209)
                      +|+|.|+ |++|...++.+...|.. |+++++++.+.+...+ .+...+. |..    +.+...+..  .++|++|.+.|
T Consensus        31 tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~-lGa~~~i-~~~~~~~~~~~~~~~~~~~g~D~vid~~G  107 (176)
T d2fzwa2          31 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGATECI-NPQDFSKPIQEVLIEMTDGGVDYSFECIG  107 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred             EEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH-hCCcEEE-eCCchhhHHHHHHHHHcCCCCcEeeecCC
Confidence            5899987 68999999988888964 5555555554332211 1222222 221    222222222  46999999988

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.84  E-value=0.0032  Score=43.95  Aligned_cols=33  Identities=21%  Similarity=0.298  Sum_probs=30.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      +|.|.|+ |.+|+.++..++..|++|++++++++
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            6899996 99999999999999999999998765

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.84  E-value=0.011  Score=40.52  Aligned_cols=76  Identities=16%  Similarity=0.079  Sum_probs=49.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC-CCCCCCCceEEEEccC--CCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPSEGALELVYGDV--TDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++++|.|-|.-+|+-++..|+++|.+|+....+.... .......-......|+  ...+.+++....+|+||...|..
T Consensus        30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG~p  108 (171)
T d1edza1          30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSE  108 (171)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred             CEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccCCC
Confidence            3699999999999999999999999998765432110 0000000001111222  23566788888999999988853

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.79  E-value=0.0065  Score=41.60  Aligned_cols=62  Identities=15%  Similarity=0.180  Sum_probs=39.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEEEc-CCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      |+.|.| +|.||+..++.|.+. +++++++.. ++.....      .....     ..+...+..++|+|+.+...
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~------~~~~~-----~~~~~~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK------TPVFD-----VADVDKHADDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS------SCEEE-----GGGGGGTTTTCSEEEECSCT
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccccc------ccccc-----chhhhhhccccceEEEeCCC
Confidence            689998 699999999999765 577776654 3332211      11111     12223445689999988763

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.79  E-value=0.0024  Score=44.73  Aligned_cols=65  Identities=15%  Similarity=0.032  Sum_probs=44.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++.|.| .|.||++++++|..-|.+|...+|..........        ..+....++.++++++|+|+.+...
T Consensus        46 ~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          46 HVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE--------LNLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             EEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             ceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc--------ccccccCCHHHHHHhccchhhcccc
Confidence            577777 7999999999999999999999886432111000        0122234456678999988776653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.79  E-value=0.0091  Score=39.10  Aligned_cols=35  Identities=23%  Similarity=0.419  Sum_probs=31.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|++|-.++..|.+.|.+|+++.+.+.-+
T Consensus        37 ~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~l   71 (133)
T d1q1ra2          37 RLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARVL   71 (133)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred             EEEEEC-CchHHHHHHHHHHhhCcceeeeeeccccc
Confidence            688998 59999999999999999999999876543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0014  Score=44.76  Aligned_cols=63  Identities=19%  Similarity=0.197  Sum_probs=43.7

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|+| .|.||+.+|++|...|.+|++....+.+.-+... .+..        ...+.+++...|++|-+.|
T Consensus        26 ~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~-dG~~--------v~~~~~a~~~adivvtaTG   88 (163)
T d1li4a1          26 VAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAM-EGYE--------VTTMDEACQEGNIFVTTTG   88 (163)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCE--------ECCHHHHTTTCSEEEECSS
T ss_pred             EEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhc-CceE--------eeehhhhhhhccEEEecCC
Confidence            677887 8999999999999999999998776532111000 1222        2234567778888887766

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.02  Score=39.09  Aligned_cols=54  Identities=17%  Similarity=0.192  Sum_probs=42.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++++|.|-|.-+|+.++..|.++|.+|+.......                |      +.+..+++|++|.++|..
T Consensus        40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~----------------~------l~~~~~~aDivi~a~G~~   93 (170)
T d1a4ia1          40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA----------------H------LDEEVNKGDILVVATGQP   93 (170)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS----------------S------HHHHHTTCSEEEECCCCT
T ss_pred             ceEEEEecCCccchHHHHHHHhccCceEEEecccc----------------c------HHHHHhhccchhhccccc
Confidence            36999999999999999999999999998754322                1      134467889999988853

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.75  E-value=0.0077  Score=38.34  Aligned_cols=34  Identities=32%  Similarity=0.444  Sum_probs=29.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +++|.| +|++|-.+|..|.+.|.+|+++.|.+.-
T Consensus        23 ~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          23 HLVVVG-GGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             eEEEEC-CCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            578887 6999999999999999999999887653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.75  E-value=0.0068  Score=39.14  Aligned_cols=31  Identities=32%  Similarity=0.404  Sum_probs=28.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      +++|+| +|+||-.+|..|.+.|.+|+++.|+
T Consensus        22 ~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          22 KTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            578888 5999999999999999999999875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.74  E-value=0.0046  Score=42.56  Aligned_cols=71  Identities=11%  Similarity=0.007  Sum_probs=46.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCceEEEEccCC--C--HHHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVT--D--YRSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~--~--~~~~~~~~--~~~d~vi~~a~   74 (209)
                      +|+|.|+ |.+|...++.+...|. +|+++++++.+++...+. +.+.+. |.+  |  .+.+....  .+.|++|.+.+
T Consensus        30 ~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~l-Ga~~~i-~~~~~d~~~~~~~~~~~~~G~d~vid~~g  106 (174)
T d1p0fa2          30 TCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GATECL-NPKDYDKPIYEVICEKTNGGVDYAVECAG  106 (174)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHc-CCcEEE-cCCCchhHHHHHHHHhcCCCCcEEEEcCC
Confidence            6899985 9999999999988885 688888877665433222 333332 222  2  22222222  36999999987


Q ss_pred             c
Q 028444           75 L   75 (209)
Q Consensus        75 ~   75 (209)
                      .
T Consensus       107 ~  107 (174)
T d1p0fa2         107 R  107 (174)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.66  E-value=0.0073  Score=39.78  Aligned_cols=29  Identities=24%  Similarity=0.366  Sum_probs=24.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC-CCeEEEE
Q 028444            2 KILVSGASGYLGGRLCHALLKQ-GHSVRAL   30 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~-g~~V~~~   30 (209)
                      ||.|.|++|-+|+.+++.+.+. ++++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            7899999999999999987654 5777664

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.66  E-value=0.0034  Score=42.71  Aligned_cols=71  Identities=20%  Similarity=0.148  Sum_probs=45.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCC-C-HHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-D-YRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~-~-~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|.| +|.||...++.+...|.+|+++++++.+.+.... .+.+.+...-. | .+.+.+...+.+.+|-+++
T Consensus        30 ~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~-~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          30 WVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             EEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh-cCcceecccccchhhhhcccccCCCceEEeecC
Confidence            588886 5999999999998999999999887665433222 24444432222 2 2334555566676776665

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.65  E-value=0.0085  Score=43.03  Aligned_cols=32  Identities=34%  Similarity=0.498  Sum_probs=29.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      ||+|+| +|..|...|.+|.++|++|.++.|+.
T Consensus         8 kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           8 RVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            799999 59999999999999999999999864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.61  E-value=0.007  Score=39.10  Aligned_cols=35  Identities=23%  Similarity=0.385  Sum_probs=31.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +++|+| +|+||-.+|..|.+.|.+|+++.|++..+
T Consensus        27 ~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          27 KLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             EEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             eEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            678888 59999999999999999999999987654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.58  E-value=0.0019  Score=44.56  Aligned_cols=108  Identities=14%  Similarity=0.078  Sum_probs=62.3

Q ss_pred             CEEEEEcCCChhHHH--HHHHHHhC----CCeEEEEEcCCCCCCCCC---------CCCceEEEEccCCCHHHHHHHhcC
Q 028444            1 MKILVSGASGYLGGR--LCHALLKQ----GHSVRALVRRTSDISGLP---------SEGALELVYGDVTDYRSLVDACFG   65 (209)
Q Consensus         1 m~ilItG~~G~IG~~--l~~~l~~~----g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~   65 (209)
                      |||.|+|| |.+|..  +...|+..    +.++++++.++++++...         .....++...  +|   ..+++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL~d   76 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVIID   76 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHHTT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcccC
Confidence            89999996 888865  34444433    358999998866432100         0012222221  22   3567899


Q ss_pred             cCEEEEcCccCCC-------------------CCC-------CccchhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           66 CHVIFHTAALVEP-------------------WLP-------DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        66 ~d~vi~~a~~~~~-------------------~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      +|+|++.++....                   ...       .......-|+.-...+++.+++......+|++|
T Consensus        77 ad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          77 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9999999764100                   000       001113457888888888888875334555554

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.46  E-value=0.044  Score=34.83  Aligned_cols=82  Identities=26%  Similarity=0.306  Sum_probs=50.7

Q ss_pred             CEEEEEcCC---ChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCC
Q 028444            1 MKILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (209)
Q Consensus         1 m~ilItG~~---G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~   77 (209)
                      ++|.|.|+|   +-.|..+.+.|++.||+|+.+..+.+...      +...       ..++.++-..+|.++-+-.   
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~------G~~~-------y~sl~~lp~~~D~vvi~vp---   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE------GLKC-------YRSVRELPKDVDVIVFVVP---   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET------TEEC-------BSSGGGSCTTCCEEEECSC---
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc------Cccc-------cccchhccccceEEEEEeC---
Confidence            368999998   56899999999999999888743322111      2222       2223334456787775533   


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHHHhcCCccEEEE
Q 028444           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (209)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~  112 (209)
                                   -..+..+++.+... +.+.+++
T Consensus        66 -------------~~~~~~~l~~~~~~-g~k~v~~   86 (116)
T d1y81a1          66 -------------PKVGLQVAKEAVEA-GFKKLWF   86 (116)
T ss_dssp             -------------HHHHHHHHHHHHHT-TCCEEEE
T ss_pred             -------------HHHHHHHHHHHHhc-CCceEEe
Confidence                         22355566667666 3555543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.41  E-value=0.008  Score=43.89  Aligned_cols=31  Identities=23%  Similarity=0.354  Sum_probs=28.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|.+|..+|.+|.++|.+|+++.++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            89999 59999999999999999999998864

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.39  E-value=0.025  Score=39.79  Aligned_cols=73  Identities=21%  Similarity=0.169  Sum_probs=45.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-C-CCC-------CCceEEEE-ccCCCHHHHHHHh-cCcCEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-G-LPS-------EGALELVY-GDVTDYRSLVDAC-FGCHVI   69 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-~-~~~-------~~~~~~~~-~Dl~~~~~~~~~~-~~~d~v   69 (209)
                      |||++.| ++..|..+.+.|++.|++|.++.-.+++.. . ...       ..++.++. .++.+++.++.+. .++|++
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            9999996 566899999999999999987654332211 1 111       12455444 3555555444333 268888


Q ss_pred             EEcCc
Q 028444           70 FHTAA   74 (209)
Q Consensus        70 i~~a~   74 (209)
                      +....
T Consensus        80 i~~g~   84 (203)
T d2blna2          80 FSFYY   84 (203)
T ss_dssp             EEESC
T ss_pred             eeeec
Confidence            76654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.37  E-value=0.0082  Score=41.96  Aligned_cols=35  Identities=37%  Similarity=0.440  Sum_probs=29.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      |||.|+| .|++|..++..| ++|++|++++-++.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v   35 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKV   35 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHH
Confidence            9999997 899999999765 6799999998776543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.34  E-value=0.02  Score=36.50  Aligned_cols=34  Identities=18%  Similarity=0.144  Sum_probs=29.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      +++|.| +|+||-.++..|.+.|.+|+++.|++.-
T Consensus        24 ~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          24 TVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence            578877 6999999999999999999999987653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.33  E-value=0.011  Score=42.67  Aligned_cols=34  Identities=24%  Similarity=0.213  Sum_probs=30.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      +||+|+| +|..|...|..|.++|++|+++.|++.
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4899999 599999999999999999999988654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.23  E-value=0.048  Score=35.82  Aligned_cols=81  Identities=19%  Similarity=0.151  Sum_probs=51.3

Q ss_pred             EEEEEcCC---ChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCccCCC
Q 028444            2 KILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~---G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~   78 (209)
                      +|.|.|+|   +-.|..+++.|.+.||+|+.+........      +...       ..++.++-..+|.++-+..    
T Consensus        21 sIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~------G~~~-------~~sl~dlp~~iD~v~i~vp----   83 (139)
T d2d59a1          21 KIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL------GRKC-------YPSVLDIPDKIEVVDLFVK----   83 (139)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET------TEEC-------BSSGGGCSSCCSEEEECSC----
T ss_pred             eEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccC------CCcc-------cccccccCccceEEEEEeC----
Confidence            68999999   67999999999999999988854322111      1111       1122333456787765533    


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEE
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~  112 (209)
                                  ......+++.+.+. +.+.+++
T Consensus        84 ------------~~~~~~~~~e~~~~-g~k~v~~  104 (139)
T d2d59a1          84 ------------PKLTMEYVEQAIKK-GAKVVWF  104 (139)
T ss_dssp             ------------HHHHHHHHHHHHHH-TCSEEEE
T ss_pred             ------------HHHHHHHHHHHHHh-CCCEEEE
Confidence                        33466677777776 3565554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.20  E-value=0.015  Score=37.59  Aligned_cols=35  Identities=17%  Similarity=0.285  Sum_probs=30.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|+||-.+|..|.+.|.+|+++.|.+.-+
T Consensus        28 ~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~il   62 (125)
T d1ojta2          28 KLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGLM   62 (125)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             eEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecccc
Confidence            688999 59999999999999999999998876533

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.13  E-value=0.012  Score=40.90  Aligned_cols=33  Identities=21%  Similarity=0.263  Sum_probs=28.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT   34 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~   34 (209)
                      |||+|.|| |++|-.+|..|.+.  +.+|+++.|++
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            99999995 89999999999876  46788888754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.048  Score=40.50  Aligned_cols=27  Identities=33%  Similarity=0.309  Sum_probs=24.3

Q ss_pred             cCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            7 GASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         7 G~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      -.||-.|.+||++|..+|++|+++.+.
T Consensus        43 ~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          43 FSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            357899999999999999999999875

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.91  E-value=0.018  Score=43.38  Aligned_cols=34  Identities=32%  Similarity=0.617  Sum_probs=30.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      +||+|+| +|.-|...|.+|.++|++|.++-+++.
T Consensus         3 KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           3 KKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4899999 699999999999999999999987654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.90  E-value=0.0046  Score=42.46  Aligned_cols=111  Identities=9%  Similarity=-0.006  Sum_probs=59.0

Q ss_pred             CEEEEEcCC-ChhHHHHHHHHHhCC----CeEEEEEcCCCC--CCCCCC-------CCceEEEEccCCCHHHHHHHhcCc
Q 028444            1 MKILVSGAS-GYLGGRLCHALLKQG----HSVRALVRRTSD--ISGLPS-------EGALELVYGDVTDYRSLVDACFGC   66 (209)
Q Consensus         1 m~ilItG~~-G~IG~~l~~~l~~~g----~~V~~~~r~~~~--~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~   66 (209)
                      |||.|+||. .+.+..++.-+....    -++.+++.++++  ++....       ..+.......-+|.   .++++++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~---~~al~ga   78 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDR---RRALDGA   78 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCH---HHHHTTC
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCc---hhhcCCC
Confidence            799999973 345555555444332    488888876542  111000       01122222223343   4567899


Q ss_pred             CEEEEcCccCCCC------------------CCCcc--chhhhHHHHHHHHHHHHHhcCCccEEEEEc
Q 028444           67 HVIFHTAALVEPW------------------LPDPS--RFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (209)
Q Consensus        67 d~vi~~a~~~~~~------------------~~~~~--~~~~~n~~~~~~l~~~~~~~~~~~~~i~~s  114 (209)
                      |+||..|+.....                  ...+.  ....-|+.-...+++.+.+.....-+|.+|
T Consensus        79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          79 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            9999999853110                  00000  112356777777777777774333455544

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.90  E-value=0.015  Score=34.27  Aligned_cols=50  Identities=18%  Similarity=0.143  Sum_probs=36.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD   55 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~   55 (209)
                      +|.|.| +|.+|+-++.+-.+-|+++..++-+++.....   .....+..+..+
T Consensus         3 ~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~---~a~dvIT~e~E~   52 (78)
T d3etja2           3 QVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP---FQQSVITAEIER   52 (78)
T ss_dssp             EEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGGSC---GGGSEEEESSSC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCcccc---cccceEEEeecc
Confidence            688888 69999999999999999999998654432211   134556656654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.80  E-value=0.02  Score=39.31  Aligned_cols=34  Identities=21%  Similarity=0.218  Sum_probs=29.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~~   35 (209)
                      .||+|+| +|..|-..|..|.+.|++ |+++.|++.
T Consensus         5 ~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           5 AKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            4799999 599999999999999984 999988754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.80  E-value=0.0051  Score=43.46  Aligned_cols=64  Identities=22%  Similarity=0.280  Sum_probs=42.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHh-cCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~   74 (209)
                      ++++|-| .|-+|+++++.|.+.|.+|++.+.+......... .+.+.+     +.+   +++ .++|+++-||.
T Consensus        28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-~g~~~~-----~~~---~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHTAV-----ALE---DVLSTPCDVFAPCAM   92 (201)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-----CGG---GGGGCCCSEEEECSC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-hccccc-----Ccc---ccccccceeeecccc
Confidence            3688887 8999999999999999999987665432221110 122221     222   233 47899999886

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.75  E-value=0.026  Score=38.89  Aligned_cols=34  Identities=21%  Similarity=0.289  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      ++|+|+| +|..|-..|..|.++|++|+++.+.+.
T Consensus        44 k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          44 KNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCc
Confidence            3799999 599999999999999999999988654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.73  E-value=0.0057  Score=41.86  Aligned_cols=68  Identities=12%  Similarity=0.150  Sum_probs=39.5

Q ss_pred             EEEEEcCCChhHHH-HHHHHHhC-----CCeEEEEEcCCCCCCCCCC---------CCceEEEEccCCCHHHHHHHhcCc
Q 028444            2 KILVSGASGYLGGR-LCHALLKQ-----GHSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGC   66 (209)
Q Consensus         2 ~ilItG~~G~IG~~-l~~~l~~~-----g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~   66 (209)
                      ||.|+||++ +|.. ++..++..     +.++++++.++++++....         ....+....  +|   ..++++++
T Consensus         5 KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal~~A   78 (167)
T d1u8xx1           5 SIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAFTDV   78 (167)
T ss_dssp             EEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHHSSC
T ss_pred             eEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhccCCC
Confidence            799999854 5543 44444432     2489999887665431100         011222221  12   25678999


Q ss_pred             CEEEEcCcc
Q 028444           67 HVIFHTAAL   75 (209)
Q Consensus        67 d~vi~~a~~   75 (209)
                      |+||..++.
T Consensus        79 D~Vvitag~   87 (167)
T d1u8xx1          79 DFVMAHIRV   87 (167)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999986

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.69  E-value=0.016  Score=38.60  Aligned_cols=31  Identities=23%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR   32 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r   32 (209)
                      +++||+|| |.+|..-++.|++.|.+|++++.
T Consensus        14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            37999997 88999999999999999999964

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.61  E-value=0.017  Score=43.05  Aligned_cols=34  Identities=24%  Similarity=0.410  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      ..++|+| +|.-|..+|++|.+.|++|.++.+++.
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            0689999 599999999999999999999977543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.59  E-value=0.028  Score=37.46  Aligned_cols=33  Identities=15%  Similarity=0.284  Sum_probs=27.6

Q ss_pred             EEEE-cCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            3 ILVS-GASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         3 ilIt-G~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      ++|. .|+|+||..+++.|.+.|.+|+++.+.+.
T Consensus        42 vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          42 VVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             EEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             eEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4454 35699999999999999999999998653

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.54  E-value=0.0028  Score=45.38  Aligned_cols=26  Identities=31%  Similarity=0.520  Sum_probs=23.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSV   27 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V   27 (209)
                      |||+|+| +|-+|...|.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            9999999 5999999999999999754

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.019  Score=46.57  Aligned_cols=31  Identities=16%  Similarity=0.177  Sum_probs=26.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~   33 (209)
                      +|+|.|+ |++|..+++.|+..|. ++++++.+
T Consensus        27 ~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          27 HVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             EEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            7999995 8899999999999994 77787653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.46  E-value=0.024  Score=41.29  Aligned_cols=34  Identities=21%  Similarity=0.227  Sum_probs=30.2

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      +||+|+| +|.-|-..|.+|.+.|++|.++.+++.
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            5899999 599999999999999999999987543

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=94.45  E-value=0.1  Score=36.47  Aligned_cols=73  Identities=19%  Similarity=0.232  Sum_probs=45.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCC--------CceEEEEccCCCHHHHHHHhc--Cc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSE--------GALELVYGDVTDYRSLVDACF--GC   66 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~--------~~~~~~~~Dl~~~~~~~~~~~--~~   66 (209)
                      |||+++| ++..+..+.+.|++.|++|.++.-.+++...    ....        .++.....+..+.+...+.++  ++
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQA   82 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTTC
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhcc
Confidence            8999998 5788989999999999998876644332111    0000        244555555555555555554  57


Q ss_pred             CEEEEcCc
Q 028444           67 HVIFHTAA   74 (209)
Q Consensus        67 d~vi~~a~   74 (209)
                      |+++-+..
T Consensus        83 d~~v~~~~   90 (206)
T d1fmta2          83 DVMVVVAY   90 (206)
T ss_dssp             SEEEEESC
T ss_pred             eEEEeecc
Confidence            76665544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.39  E-value=0.023  Score=40.09  Aligned_cols=31  Identities=23%  Similarity=0.314  Sum_probs=28.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|.-|...|.+|.++|++|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78889 69999999999999999999998865

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.23  E-value=0.12  Score=38.29  Aligned_cols=31  Identities=23%  Similarity=0.214  Sum_probs=27.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      +++|-| .|-+|+++++.|.+.|.+|+.++-+
T Consensus        38 tvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          38 TFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            678877 7999999999999999999998654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.10  E-value=0.04  Score=39.75  Aligned_cols=34  Identities=29%  Similarity=0.386  Sum_probs=29.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~~   35 (209)
                      |+|+|+| +|..|..++..|.+.|. +|.++-|++.
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6899999 59999999999999995 8888888654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.86  E-value=0.0052  Score=44.32  Aligned_cols=67  Identities=16%  Similarity=0.244  Sum_probs=42.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCcc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~   75 (209)
                      ++++|-| .|-+|+++++.|.+.|.+|++.+.+....+......+.+.     .+.+++  +-.++|+++-||-.
T Consensus        40 ~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~-----~~~~~~--~~~~cDIl~PcA~~  106 (230)
T d1leha1          40 LAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-----VAPNAI--YGVTCDIFAPCALG  106 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-----CCGGGT--TTCCCSEEEECSCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc-----cCCccc--ccccccEecccccc
Confidence            3677877 8999999999999999999987655432221111112221     122221  12468999999873

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.82  E-value=0.2  Score=31.77  Aligned_cols=72  Identities=14%  Similarity=0.104  Sum_probs=45.6

Q ss_pred             CEEEEEcCCCh-hH---------HHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCE
Q 028444            1 MKILVSGASGY-LG---------GRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHV   68 (209)
Q Consensus         1 m~ilItG~~G~-IG---------~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   68 (209)
                      .||+|.|+... ||         ...+++|.+.|++++++..|+........  -..-+..+--..+.+.+.++  ++|.
T Consensus         5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d--~aD~lYfeplt~e~v~~Ii~~E~p~~   82 (121)
T d1a9xa4           5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD--TSDRLYFEPVTLEDVLEIVRIEKPKG   82 (121)
T ss_dssp             CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT--SSSEEECCCCSHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh--hcCceEEccCCHHHHHHHHHHhCCCE
Confidence            37999997552 44         57889999999999999888765432111  11222223344666776653  6887


Q ss_pred             EEEcCc
Q 028444           69 IFHTAA   74 (209)
Q Consensus        69 vi~~a~   74 (209)
                      |+-.-|
T Consensus        83 ii~~~G   88 (121)
T d1a9xa4          83 VIVQYG   88 (121)
T ss_dssp             EECSSS
T ss_pred             EEeehh
Confidence            764433

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=93.70  E-value=0.11  Score=33.23  Aligned_cols=91  Identities=11%  Similarity=0.091  Sum_probs=54.7

Q ss_pred             EEEEEcCCChhHHHHHHHHH-hCCCeEEEEEcCC-CCCCCCCCCCceEEEEccCCCHHHHHHHhc-CcCEEEEcCccCCC
Q 028444            2 KILVSGASGYLGGRLCHALL-KQGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALVEP   78 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~-~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~vi~~a~~~~~   78 (209)
                      +++|.| +|.+|+++++++. +.++++++...+. .+....-  .++..+.     .+.+.+..+ .+++.+.+..    
T Consensus         5 ~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I--~Gi~V~~-----~~~l~~~~~~~i~iai~~i~----   72 (126)
T d2dt5a2           5 GLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRPV--RGGVIEH-----VDLLPQRVPGRIEIALLTVP----   72 (126)
T ss_dssp             EEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE--TTEEEEE-----GGGHHHHSTTTCCEEEECSC----
T ss_pred             eEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE--CCEEEec-----HHHHHHHHhhcccEEEEeCC----
Confidence            689999 5999999999764 4478888865543 3322211  2555553     234555444 4555554433    


Q ss_pred             CCCCccchhhhHHHHHHHHHHHHHhcCCccEEEEEccce
Q 028444           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (209)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ss~~  117 (209)
                                  -.....+++.|.+. +++.+..++...
T Consensus        73 ------------~~~~~~I~d~l~~~-gIk~I~~f~~~~   98 (126)
T d2dt5a2          73 ------------REAAQKAADLLVAA-GIKGILNFAPVV   98 (126)
T ss_dssp             ------------HHHHHHHHHHHHHH-TCCEEEECSSSC
T ss_pred             ------------HHHHHHHHHHHHHc-CCCEEeecCcee
Confidence                        12245577777777 477777765543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.68  E-value=0.034  Score=41.02  Aligned_cols=32  Identities=25%  Similarity=0.570  Sum_probs=28.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~   34 (209)
                      +|+|+| +|-+|..+|.+|+++|+ +|.++.|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            589999 59999999999999996 699998864

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=93.65  E-value=0.058  Score=41.50  Aligned_cols=32  Identities=34%  Similarity=0.472  Sum_probs=27.1

Q ss_pred             CEEEEEcC------CChhH---HHHHHHHHhCCCeEEEEEc
Q 028444            1 MKILVSGA------SGYLG---GRLCHALLKQGHSVRALVR   32 (209)
Q Consensus         1 m~ilItG~------~G~IG---~~l~~~l~~~g~~V~~~~r   32 (209)
                      |||++++.      +|++|   ..|+++|.+.|++|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            99999886      57887   5678999999999999874

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=93.52  E-value=0.043  Score=39.96  Aligned_cols=31  Identities=26%  Similarity=0.276  Sum_probs=28.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|..|..+|.+|.++|++|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78888 59999999999999999999998864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.49  E-value=0.067  Score=33.77  Aligned_cols=35  Identities=14%  Similarity=0.264  Sum_probs=27.0

Q ss_pred             EEEEEcCCChhHHHHHHHHH---hCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALL---KQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~---~~g~~V~~~~r~~~~~   37 (209)
                      +++|.|| |++|-.+|..|.   .+|.+|+++.|.+.-+
T Consensus        22 ~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL   59 (117)
T d1aoga2          22 RVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMIL   59 (117)
T ss_dssp             EEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSS
T ss_pred             eEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhh
Confidence            6889995 999999996544   5567899998876543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.49  E-value=0.033  Score=40.81  Aligned_cols=32  Identities=34%  Similarity=0.344  Sum_probs=29.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      +|+|.|| |..|..++..|.+.|.+|.++.|++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3999995 8999999999999999999998865

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.32  E-value=0.039  Score=40.78  Aligned_cols=32  Identities=25%  Similarity=0.402  Sum_probs=29.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      +|+|+| +|..|-..|.+|.++|++|.++.+++
T Consensus        32 kV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          32 HVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             EEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             eEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            799999 59999999999999999999998754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.29  E-value=0.062  Score=36.33  Aligned_cols=32  Identities=16%  Similarity=0.294  Sum_probs=27.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      +|+|.| +|++|-.++..|.+.|.+|.++.+.+
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           5 NVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence            688888 69999999999999998877766554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.22  E-value=0.069  Score=35.55  Aligned_cols=33  Identities=21%  Similarity=0.306  Sum_probs=26.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRR   33 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~   33 (209)
                      ++|.|.|+||.||....+-+.+.  .++|.+++-+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            15999999999999988877665  4788888754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.19  E-value=0.065  Score=38.07  Aligned_cols=33  Identities=21%  Similarity=0.382  Sum_probs=29.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      +|+|+| +|..|-..|.+|.++|++|+++.+++.
T Consensus        51 ~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          51 SVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             eEEEEc-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence            699999 599999999999999999999987654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.03  E-value=0.05  Score=36.86  Aligned_cols=71  Identities=11%  Similarity=0.039  Sum_probs=42.9

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCceEEEEccCCC----HHHHHHHh--cCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTD----YRSLVDAC--FGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~--~~~d~vi~~a~   74 (209)
                      +|+|+|+ |.+|...+..+...| .+|+++++++.+++...+ .++..+. |..+    .+.+....  .++|+++.+.|
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GAd~~i-n~~~~~~~~~~~~~~~~~~G~d~vid~~G  107 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFV-NPNDHSEPISQVLSKMTNGGVDFSLECVG  107 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCCEEE-CGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCCcEEE-cCCCcchhHHHHHHhhccCCcceeeeecC
Confidence            6899985 667777777777776 468888887766543222 2332222 2221    23333333  36999999988


Q ss_pred             c
Q 028444           75 L   75 (209)
Q Consensus        75 ~   75 (209)
                      .
T Consensus       108 ~  108 (175)
T d1cdoa2         108 N  108 (175)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.98  E-value=0.056  Score=36.21  Aligned_cols=33  Identities=21%  Similarity=0.224  Sum_probs=27.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRT   34 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~   34 (209)
                      +||+|.| +|++|-.++.+|.+.+  .+|+++.+++
T Consensus         3 krivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999 5999999999999887  4788887654

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.96  E-value=0.12  Score=31.09  Aligned_cols=33  Identities=24%  Similarity=0.268  Sum_probs=27.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |||||.| +|+=-.+|+..|.+++.++++.--|+
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~   33 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNA   33 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCc
Confidence            9999999 67777899999998899888864443

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.94  E-value=0.064  Score=35.75  Aligned_cols=31  Identities=26%  Similarity=0.339  Sum_probs=26.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      ||+|.| +|++|-.++..|. ++.+|+++.|.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            789999 5999999999984 578999998754

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.84  E-value=0.094  Score=36.66  Aligned_cols=34  Identities=32%  Similarity=0.472  Sum_probs=28.9

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      |||++.| ++..|..+.+.|.++|++|.++.-.++
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~   34 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPD   34 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCC
Confidence            9999998 678899999999999999998764443

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.68  E-value=0.14  Score=32.93  Aligned_cols=71  Identities=20%  Similarity=0.288  Sum_probs=46.6

Q ss_pred             EEEEEcCCCh-hH---------HHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhc--CcCEE
Q 028444            2 KILVSGASGY-LG---------GRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVI   69 (209)
Q Consensus         2 ~ilItG~~G~-IG---------~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~v   69 (209)
                      ||+|.|+... ||         ...+++|.+.|++++++..|+........  -..-+..+--..+.+.+.++  ++|.|
T Consensus         9 kvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d--~aD~lYfePlt~e~v~~Ii~~E~pd~i   86 (127)
T d1a9xa3           9 SILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE--MADATYIEPIHWEVVRKIIEKERPDAV   86 (127)
T ss_dssp             EEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG--GSSEEECSCCCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh--hcceeeeecCCHHHHHHHHHHhCcCCe
Confidence            7999997553 55         57788999999999999888765322111  11122234445777777764  68888


Q ss_pred             EEcCc
Q 028444           70 FHTAA   74 (209)
Q Consensus        70 i~~a~   74 (209)
                      +-.-|
T Consensus        87 l~~~G   91 (127)
T d1a9xa3          87 LPTMG   91 (127)
T ss_dssp             ECSSS
T ss_pred             EEEee
Confidence            75544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.66  E-value=0.018  Score=38.96  Aligned_cols=63  Identities=10%  Similarity=0.044  Sum_probs=43.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      +++|.| -|.+|+.+|++|...|.+|+++..++-++-+.. ..+++.        ..+.++++..|++|-+-|
T Consensus        25 ~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf~v--------~~~~~a~~~aDi~vTaTG   87 (163)
T d1v8ba1          25 IVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFNV--------VTLDEIVDKGDFFITCTG   87 (163)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCEE--------CCHHHHTTTCSEEEECCS
T ss_pred             EEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCCcc--------CchhHccccCcEEEEcCC
Confidence            577777 899999999999999999999876653221111 113322        223567788888887766

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.65  E-value=0.043  Score=37.44  Aligned_cols=74  Identities=19%  Similarity=0.194  Sum_probs=43.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCC-CCCCCCceEEEEccCCCH-----------HHHHHHhcCcC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS-GLPSEGALELVYGDVTDY-----------RSLVDACFGCH   67 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~Dl~~~-----------~~~~~~~~~~d   67 (209)
                      |||.|.| .|-||+.+++.+.+++ .+++.+....+... ......+...+..+-...           ..+.++..++|
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD   81 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD   81 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCC
Confidence            3799998 7999999999998765 67776653222110 000001222333222211           22344556899


Q ss_pred             EEEEcCcc
Q 028444           68 VIFHTAAL   75 (209)
Q Consensus        68 ~vi~~a~~   75 (209)
                      +||-|.|.
T Consensus        82 vViEcTG~   89 (172)
T d2czca2          82 IIVDATPG   89 (172)
T ss_dssp             EEEECCST
T ss_pred             EEEECCCC
Confidence            99999985

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.34  E-value=0.44  Score=34.05  Aligned_cols=31  Identities=26%  Similarity=0.278  Sum_probs=27.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      +++|-| .|-+|+++++.|.+.|.+|+.++-.
T Consensus        33 ~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          33 TVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            678887 8999999999999999999988754

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=92.25  E-value=0.35  Score=32.54  Aligned_cols=74  Identities=22%  Similarity=0.293  Sum_probs=46.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-------------CCCCC----------CceEEEEccCCCHH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------------GLPSE----------GALELVYGDVTDYR   57 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-------------~~~~~----------~~~~~~~~Dl~~~~   57 (209)
                      |||.|-| -|-|||.+.|.|.+++.+|+.+.-..+ .+             .+...          .+-.+....-.|++
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~~~-~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~   78 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDLTD-NKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK   78 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSC-HHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcc-hhhhhheeecccccCccccccccccceeEecceeEEEEecCChH
Confidence            7899987 799999999999999998888743211 11             01100          11112222334565


Q ss_pred             HHHHHhcCcCEEEEcCccC
Q 028444           58 SLVDACFGCHVIFHTAALV   76 (209)
Q Consensus        58 ~~~~~~~~~d~vi~~a~~~   76 (209)
                      ++...-.++|+|+-|.|.+
T Consensus        79 ~i~W~~~gvdiViEcTG~f   97 (168)
T d2g82a1          79 EIPWAEAGVGVVIESTGVF   97 (168)
T ss_dssp             GCCTGGGTEEEEEECSSSC
T ss_pred             HCcccccCCceeEeccccc
Confidence            5554445789999999853

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.24  E-value=0.074  Score=36.22  Aligned_cols=36  Identities=17%  Similarity=0.242  Sum_probs=29.7

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~   38 (209)
                      ++|+|.| +|+.+++++..|.+.| +|+++.|+.++.+
T Consensus        19 k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~   54 (177)
T d1nvta1          19 KNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAE   54 (177)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred             CEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence            3689998 5889999999997777 8999999876543

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.23  E-value=0.043  Score=37.38  Aligned_cols=31  Identities=19%  Similarity=0.188  Sum_probs=25.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      +|+|+| +|++|-.++..|.+.|.++.++.++
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence            589999 6999999999999999776665543

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=92.13  E-value=0.095  Score=39.63  Aligned_cols=30  Identities=23%  Similarity=0.196  Sum_probs=27.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      |+|+| +|+-|..+|.+|.+.|++|.++-+.
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78888 7999999999999999999999875

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.97  E-value=0.081  Score=37.29  Aligned_cols=32  Identities=22%  Similarity=0.336  Sum_probs=28.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC-eEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~-~V~~~~r~~   34 (209)
                      +|+|+| +|.-|...|.+|.++|+ +|+++-+++
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            689999 59999999999999996 699998764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.42  E-value=0.12  Score=37.97  Aligned_cols=32  Identities=31%  Similarity=0.395  Sum_probs=28.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      ||+|+| +|.-|-..|.+|.++|++|.++-+++
T Consensus         7 kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           7 KVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             EEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            699999 59999999999999999999986543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.37  E-value=0.11  Score=34.51  Aligned_cols=32  Identities=25%  Similarity=0.315  Sum_probs=26.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~   33 (209)
                      +|.|.|+||-||....+-+.+.  .++|.+++-+
T Consensus         4 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           4 TVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            6999999999999988877655  4888888654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.11  E-value=0.21  Score=31.21  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=27.7

Q ss_pred             EEEEEcCCChhHHHHHHHHH---hCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALL---KQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~---~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|++|-.++..|.   +.|.+|+++.|++.-+
T Consensus        20 ~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~il   57 (117)
T d1feca2          20 RALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDMIL   57 (117)
T ss_dssp             EEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred             eEEEEC-CChHHHHHHHHhHhhcccccccceeccccccc
Confidence            688999 5999999997654   4589999999876543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.13  Score=37.96  Aligned_cols=31  Identities=29%  Similarity=0.382  Sum_probs=28.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|.-|-..|.+|.++|++|+++-+++
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            68888 59999999999999999999998755

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=90.86  E-value=0.13  Score=38.64  Aligned_cols=32  Identities=25%  Similarity=0.295  Sum_probs=24.7

Q ss_pred             CEEEEEc-CC-ChhH--HHHHHHHHhCCCeEEEEEc
Q 028444            1 MKILVSG-AS-GYLG--GRLCHALLKQGHSVRALVR   32 (209)
Q Consensus         1 m~ilItG-~~-G~IG--~~l~~~l~~~g~~V~~~~r   32 (209)
                      ||||+++ || |.+-  -+|+++|.++||+|+.++-
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            9999885 33 3343  4788999999999999874

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.40  E-value=0.17  Score=35.88  Aligned_cols=32  Identities=22%  Similarity=0.258  Sum_probs=28.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      |+|+| +|..|...|..|.++|++|.++.+++.
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            88999 599999999999999999999988653

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.38  E-value=0.18  Score=37.37  Aligned_cols=33  Identities=27%  Similarity=0.371  Sum_probs=29.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      .|+|+| +|.-|-+.+.+|.+.|.+|.++.+++.
T Consensus         9 dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVG-AGFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            489999 599999999999999999999987654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.35  E-value=0.17  Score=37.51  Aligned_cols=33  Identities=30%  Similarity=0.468  Sum_probs=24.1

Q ss_pred             CEEEEEcC-C-Chh--HHHHHHHHHhCCCeEEEEEcC
Q 028444            1 MKILVSGA-S-GYL--GGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         1 m~ilItG~-~-G~I--G~~l~~~l~~~g~~V~~~~r~   33 (209)
                      +||+|++| | |.+  ..+|+++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            47888775 3 333  346889999999999987743

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=90.26  E-value=0.23  Score=33.85  Aligned_cols=31  Identities=26%  Similarity=0.535  Sum_probs=25.8

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVR   32 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r   32 (209)
                      .||.|.| .|-||+.++|.+.+++ .+|+.+..
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            1899998 8999999999999775 67877754

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.66  E-value=0.28  Score=31.63  Aligned_cols=35  Identities=31%  Similarity=0.510  Sum_probs=27.7

Q ss_pred             EEEEEcCCChhHHHHHHHHH----hCCCeEEEEEcCCCCC
Q 028444            2 KILVSGASGYLGGRLCHALL----KQGHSVRALVRRTSDI   37 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~----~~g~~V~~~~r~~~~~   37 (209)
                      +++|.| +|++|-.++..|.    +.|.+|+++.+++..+
T Consensus        39 ~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l   77 (137)
T d1m6ia2          39 SITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKGNM   77 (137)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT
T ss_pred             EEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccccCC
Confidence            688888 5999999888775    4589999998876543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.65  E-value=0.93  Score=32.09  Aligned_cols=30  Identities=23%  Similarity=0.295  Sum_probs=25.4

Q ss_pred             EEEEEcCCChhHHHHHHHHHh-CCCeEEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVR   32 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~-~g~~V~~~~r   32 (209)
                      +++|-| .|-+|+.+++.|.+ .|.+|+.++-
T Consensus        33 ~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          33 TVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            677877 89999999999975 5999988764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.56  E-value=0.22  Score=34.83  Aligned_cols=35  Identities=29%  Similarity=0.374  Sum_probs=29.1

Q ss_pred             CE-EEEEcCCChhHH-----HHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MK-ILVSGASGYLGG-----RLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~-ilItG~~G~IG~-----~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      || |.|+++-|++|+     +++..|.++|.+|.+++-+..
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            64 889999999996     777888999999999987543

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=89.48  E-value=0.19  Score=37.70  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=27.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      ++|+| +|.-|..+|.+|.+.|++|.++-+..
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG~   37 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIGE   37 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEecCC
Confidence            78888 79999999999999999999997653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.13  E-value=0.25  Score=36.80  Aligned_cols=33  Identities=36%  Similarity=0.407  Sum_probs=28.5

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC--CeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g--~~V~~~~r~~~   35 (209)
                      +|+|+| +|.-|-..|..|+++|  ++|+++-|++.
T Consensus         6 rVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           6 KIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             eEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            699999 5999999999998877  69999988754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=89.12  E-value=1.3  Score=29.46  Aligned_cols=74  Identities=16%  Similarity=0.172  Sum_probs=44.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEcCCCCCC-------------CCCCC----------CceEEEEccCCCH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS-------------GLPSE----------GALELVYGDVTDY   56 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r~~~~~~-------------~~~~~----------~~~~~~~~Dl~~~   56 (209)
                      |||.|-| -|-|||.+.|.+.++. .+|+.+.-..+ .+             .+...          .+-.+....-.++
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~-~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p   79 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLD-ADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP   79 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSC-HHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCC-HHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh
Confidence            6788887 8999999999998875 66666643221 11             01110          1111212223355


Q ss_pred             HHHHHHhcCcCEEEEcCccC
Q 028444           57 RSLVDACFGCHVIFHTAALV   76 (209)
Q Consensus        57 ~~~~~~~~~~d~vi~~a~~~   76 (209)
                      +++..--.++|+||-|.|.+
T Consensus        80 ~~i~W~~~gvDiViEcTG~f   99 (166)
T d1gado1          80 ANLKWDEVGVDVVAEATGLF   99 (166)
T ss_dssp             GGGCHHHHTCSEEEECSSSC
T ss_pred             HHCCccccCCCEEEEccccc
Confidence            55544445899999999964

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=88.98  E-value=0.24  Score=37.38  Aligned_cols=30  Identities=30%  Similarity=0.359  Sum_probs=27.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      ++|+| +|+-|..+|.+|.+.|.+|.++-+.
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            68888 6999999999999999999999875

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.95  E-value=0.1  Score=35.01  Aligned_cols=69  Identities=13%  Similarity=0.054  Sum_probs=40.6

Q ss_pred             CEEEEEcCCChhHHHHHH-HHHh-C----CCeEEEEEcCCCCCCCCCC------CCceEEEEccCCCHHHHHHHhcCcCE
Q 028444            1 MKILVSGASGYLGGRLCH-ALLK-Q----GHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACFGCHV   68 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~-~l~~-~----g~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~d~   68 (209)
                      |||.|+|| |.+|...+- .|+. .    ..++.+++.++++++....      .........  ++   ..+.++++|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--cC---cccccCCCCE
Confidence            89999998 546755552 2322 1    3589999887654331100      012222221  22   2456799999


Q ss_pred             EEEcCcc
Q 028444           69 IFHTAAL   75 (209)
Q Consensus        69 vi~~a~~   75 (209)
                      ||..|+.
T Consensus        75 VVita~~   81 (162)
T d1up7a1          75 VIFQFRP   81 (162)
T ss_dssp             EEECCCT
T ss_pred             EEEeccc
Confidence            9999985

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.91  E-value=0.24  Score=36.75  Aligned_cols=33  Identities=27%  Similarity=0.415  Sum_probs=27.9

Q ss_pred             EEEEcCCChhHHHHHHHHH-----hCCCeEEEEEcCCCC
Q 028444            3 ILVSGASGYLGGRLCHALL-----KQGHSVRALVRRTSD   36 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~-----~~g~~V~~~~r~~~~   36 (209)
                      |+|.| +|-.|..+|..|+     ++|++|+++.|++..
T Consensus        10 V~IvG-aG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~   47 (360)
T d1pn0a1          10 VLIVG-AGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK   47 (360)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence            78888 5999999999996     579999999887543

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.88  E-value=0.094  Score=35.10  Aligned_cols=66  Identities=14%  Similarity=0.189  Sum_probs=38.4

Q ss_pred             CEEEEEcCCChhHHH-HHHHHHhC-CCeEEEEE-cCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGR-LCHALLKQ-GHSVRALV-RRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~-l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      |++.|+| +|.+|+. ....|.+. +++++++. +++++.+.+.+..++     +..  +.+..+++++|+|+-+..
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~-----~~~--~~~~~l~~~~D~V~I~tp   70 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRI-----PYA--DSLSSLAASCDAVFVHSS   70 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTC-----CBC--SSHHHHHTTCSEEEECSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccc-----ccc--ccchhhhhhccccccccc
Confidence            6899999 6899975 45666544 67877665 555443322211112     222  223444578999886653

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.54  E-value=0.25  Score=36.15  Aligned_cols=31  Identities=23%  Similarity=0.269  Sum_probs=28.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|..|-..+.+|.++|.+|+++.+.+
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            78999 69999999999999999999998754

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=88.52  E-value=0.28  Score=38.35  Aligned_cols=31  Identities=35%  Similarity=0.498  Sum_probs=25.7

Q ss_pred             CEEEEEcC-------CChhH---HHHHHHHHhCCCeEEEEE
Q 028444            1 MKILVSGA-------SGYLG---GRLCHALLKQGHSVRALV   31 (209)
Q Consensus         1 m~ilItG~-------~G~IG---~~l~~~l~~~g~~V~~~~   31 (209)
                      |||+.+..       +|++|   .+|+++|.++|++|.+++
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            88888765       48888   567899999999999985

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.49  E-value=0.31  Score=33.66  Aligned_cols=30  Identities=13%  Similarity=0.117  Sum_probs=27.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      ++|+|| |..|...+.++.+.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            788895 999999999999999999999764

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=88.40  E-value=0.25  Score=36.96  Aligned_cols=32  Identities=25%  Similarity=0.330  Sum_probs=24.3

Q ss_pred             CEEEEE-cCC-ChhH--HHHHHHHHhCCCeEEEEEc
Q 028444            1 MKILVS-GAS-GYLG--GRLCHALLKQGHSVRALVR   32 (209)
Q Consensus         1 m~ilIt-G~~-G~IG--~~l~~~l~~~g~~V~~~~r   32 (209)
                      |||+++ ||| |.|=  -+|+++|.++||+|++++.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            898884 444 3333  3789999999999999874

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=88.28  E-value=1.5  Score=30.04  Aligned_cols=92  Identities=17%  Similarity=0.233  Sum_probs=56.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC---eEEEEEcCCCCCCCCCCCCceEEEEc-c------------------CCCHHH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYG-D------------------VTDYRS   58 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~-D------------------l~~~~~   58 (209)
                      |||.|+| -|+-|..++.++.+.|.   +.+.+.-+...+.....  ...+..+ +                  ..+.++
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a--~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~   77 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNA--DVKIQIGENITRGLGAGGRPEIGEQAALESEEK   77 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCC--SEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCc--ceEEecccccCCCcccccCchhhHhHHHHHHHH
Confidence            7899999 58899999999988773   33443322222222221  1222222 1                  113566


Q ss_pred             HHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhcC
Q 028444           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK  105 (209)
Q Consensus        59 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  105 (209)
                      +.+.+++.|.||-+||.-..          +---++..+.+.+++..
T Consensus        78 I~~~l~~~d~vfi~AGlGGg----------TGtgaapviA~~ake~g  114 (194)
T d1w5fa1          78 IREVLQDTHMVFITAGFGGG----------TGTGASPVIAKIAKEMG  114 (194)
T ss_dssp             HHHHTTTCSEEEEEEETTSS----------HHHHHHHHHHHHHHHTT
T ss_pred             HHHHhcCCCeEEEEEecCCC----------cccchHHHHHHHHHHcC
Confidence            78888899999999996332          22345666778887763

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.03  E-value=0.17  Score=34.22  Aligned_cols=74  Identities=18%  Similarity=0.175  Sum_probs=45.1

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCC-------------CCCCC----------CceEEEEccCCCHHH
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------------GLPSE----------GALELVYGDVTDYRS   58 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~-------------~~~~~----------~~~~~~~~Dl~~~~~   58 (209)
                      ||.|-| -|-|||.+.|.+++++.+|+.+.-.....+             .+...          .+-.+....-.++++
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            577777 899999999999999988877653222111             01110          111222222345555


Q ss_pred             HHHHhcCcCEEEEcCccC
Q 028444           59 LVDACFGCHVIFHTAALV   76 (209)
Q Consensus        59 ~~~~~~~~d~vi~~a~~~   76 (209)
                      +..--.++|+||-|.|.+
T Consensus        81 i~W~~~gvD~ViEcTG~f   98 (169)
T d1dssg1          81 IPWSKAGAEYIVESTGVF   98 (169)
T ss_dssp             CCHHHHTCCEEEECSSSC
T ss_pred             CCccccCCCEEEecCceE
Confidence            544445899999999964

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.70  E-value=0.21  Score=34.46  Aligned_cols=31  Identities=19%  Similarity=0.246  Sum_probs=25.7

Q ss_pred             CEEEEEcCCChhHH-----HHHHHHHhCCCeEEEEE
Q 028444            1 MKILVSGASGYLGG-----RLCHALLKQGHSVRALV   31 (209)
Q Consensus         1 m~ilItG~~G~IG~-----~l~~~l~~~g~~V~~~~   31 (209)
                      ++++|||-+.++|+     .|++.|.++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            37899995449996     78889999999998885

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.40  E-value=0.33  Score=32.01  Aligned_cols=33  Identities=18%  Similarity=0.225  Sum_probs=26.2

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      ||-++| .|.+|+.++++|++.|+.+ ...|+.++
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            577888 6999999999999988865 45666543

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.26  E-value=0.32  Score=33.92  Aligned_cols=33  Identities=30%  Similarity=0.298  Sum_probs=28.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhC--CCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~--g~~V~~~~r~~~   35 (209)
                      ||+|+| +|-.|...|++|.+.  |++|+++.+.+.
T Consensus         3 kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             eEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            799999 699999999999765  789999987654

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=86.76  E-value=0.34  Score=34.81  Aligned_cols=34  Identities=18%  Similarity=0.312  Sum_probs=27.5

Q ss_pred             CEEEEEcCCChhHH-----HHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGG-----RLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~-----~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      .+|.|+| =|++|+     .|+..|++.|++|.+++.++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            0477887 899996     667789999999999998753

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.66  E-value=0.22  Score=34.70  Aligned_cols=35  Identities=17%  Similarity=0.343  Sum_probs=23.6

Q ss_pred             EEEEEcCCChhHH-HHHHHH---HhC-----CCeEEEEEcCCCC
Q 028444            2 KILVSGASGYLGG-RLCHAL---LKQ-----GHSVRALVRRTSD   36 (209)
Q Consensus         2 ~ilItG~~G~IG~-~l~~~l---~~~-----g~~V~~~~r~~~~   36 (209)
                      +++|+||||-+-+ .|.-+|   ...     +..|+++.|++..
T Consensus        22 t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s   65 (203)
T d1qkia1          22 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLT   65 (203)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCS
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCC
Confidence            5899999998774 333332   333     3689999997643

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.66  E-value=0.49  Score=33.59  Aligned_cols=32  Identities=25%  Similarity=0.261  Sum_probs=29.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      |+|+| +|..|...|..|.++|.+|.++.+++.
T Consensus         7 ViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            89999 599999999999999999999988754

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=86.26  E-value=0.46  Score=34.29  Aligned_cols=32  Identities=25%  Similarity=0.298  Sum_probs=28.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhC-CCeEEEEEcCCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTS   35 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~-g~~V~~~~r~~~   35 (209)
                      |+|+|| |.-|...|.+|+++ |.+|.++.+++.
T Consensus        36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            889995 99999999999875 999999998754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=86.10  E-value=0.26  Score=32.25  Aligned_cols=31  Identities=19%  Similarity=0.128  Sum_probs=19.8

Q ss_pred             EEcCCChhHHHHHHHHHhCCCeEEEEEcCCCC
Q 028444            5 VSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (209)
Q Consensus         5 ItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~   36 (209)
                      ++| +|-+|+++++.|.+.++.+.+..|+.++
T Consensus         4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~   34 (153)
T d2i76a2           4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDR   34 (153)
T ss_dssp             EES-CCHHHHHHHHTTC----CCCEECSSHHH
T ss_pred             EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence            455 7999999999885544434567776553

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=86.09  E-value=0.45  Score=34.24  Aligned_cols=34  Identities=15%  Similarity=0.223  Sum_probs=29.0

Q ss_pred             EEEEEcCCChhHH-----HHHHHHHhCCCeEEEEEcCCC
Q 028444            2 KILVSGASGYLGG-----RLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~-----~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      +|+|+.|=|++|+     +|+..|+++|++|.+++-++.
T Consensus        21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            5788888999997     568899999999999988753

>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: Probable aromatic acid decarboxylase Pad1
species: Escherichia coli O157:H7 [TaxId: 83334]

Probab=85.64  E-value=0.5  Score=32.29  Aligned_cols=31  Identities=32%  Similarity=0.509  Sum_probs=22.1

Q ss_pred             CEEE--EEcCCCh-hHHHHHHHHHhC-CCeEEEEE
Q 028444            1 MKIL--VSGASGY-LGGRLCHALLKQ-GHSVRALV   31 (209)
Q Consensus         1 m~il--ItG~~G~-IG~~l~~~l~~~-g~~V~~~~   31 (209)
                      |||+  |||++|- .+..++++|.+. |++|.++.
T Consensus         1 MrIllgITGas~a~~a~~ll~~L~~~~g~~V~vv~   35 (186)
T d1sbza_           1 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVM   35 (186)
T ss_dssp             CEEEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred             CEEEEEEccHHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence            7644  5777773 477888888874 88887764

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=85.55  E-value=1.3  Score=29.70  Aligned_cols=29  Identities=17%  Similarity=0.351  Sum_probs=23.1

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC---CeEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG---HSVRAL   30 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g---~~V~~~   30 (209)
                      |||.|-| -|-|||.+.|.++++.   .+|+.+
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaI   32 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVI   32 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEE
Confidence            7899988 8999999999988654   455554

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.10  E-value=0.5  Score=32.51  Aligned_cols=31  Identities=16%  Similarity=0.231  Sum_probs=27.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      ++|+|| |..|...+.++.+.|.+|.++.+++
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            688895 9999999999999999999998753

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.05  E-value=0.7  Score=30.38  Aligned_cols=32  Identities=22%  Similarity=0.290  Sum_probs=26.3

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCe-EEEEEcCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRT   34 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~-V~~~~r~~   34 (209)
                      +|+|+| +|..|--.+..+.+.|.+ |+++.|..
T Consensus        47 kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          47 AVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             EEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             EEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            688888 599999999999999964 77777754

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.00  E-value=0.47  Score=34.95  Aligned_cols=31  Identities=23%  Similarity=0.263  Sum_probs=28.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|..|...+..|.++|.+|+++.+.+
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78888 69999999999999999999998754

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.66  E-value=0.68  Score=32.11  Aligned_cols=32  Identities=28%  Similarity=0.258  Sum_probs=27.6

Q ss_pred             EEEEEcCCChhHH-----HHHHHHHhCCCeEEEEEcC
Q 028444            2 KILVSGASGYLGG-----RLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~-----~l~~~l~~~g~~V~~~~r~   33 (209)
                      .|.|+|+-|++|+     +++..|.++|.+|.+++-+
T Consensus         4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3789999999996     7778888999999999854

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=84.10  E-value=0.43  Score=32.14  Aligned_cols=31  Identities=26%  Similarity=0.405  Sum_probs=24.4

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC-CeEEEEEc
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVR   32 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g-~~V~~~~r   32 (209)
                      +||.|-| -|-|||.+.|.+++++ .+++.+.-
T Consensus         2 ikIgING-FGRIGR~v~R~~~~~~~~~ivaINd   33 (169)
T d1u8fo1           2 VKVGVNG-FGRIGRLVTRAAFNSGKVDIVAIND   33 (169)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             cEEEEEC-CcHHHHHHHHHHHHCCCcEEEEecC
Confidence            3788887 8999999999888664 77766643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=83.99  E-value=0.5  Score=34.03  Aligned_cols=30  Identities=17%  Similarity=0.221  Sum_probs=27.0

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCCeEEEEEc
Q 028444            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR   32 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r   32 (209)
                      +++|-| .|-+|+.+++.|.+.|.+|+.++-
T Consensus        38 ~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          38 TVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             EEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            688888 799999999999999999998864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=83.66  E-value=0.066  Score=36.03  Aligned_cols=68  Identities=21%  Similarity=0.329  Sum_probs=36.4

Q ss_pred             CEEEEEcCCChhHHH-HHHHHHhC-CCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            1 MKILVSGASGYLGGR-LCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         1 m~ilItG~~G~IG~~-l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      ||+.|+| .|.+|+. ....|.+. +.++.++++++.+.+.+.+..++...   .+|.+++.+  .++|+|+-+..
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~ll~--~~iD~V~I~tp   71 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSAT---CTDYRDVLQ--YGVDAVMIHAA   71 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCC---CSSTTGGGG--GCCSEEEECSC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccc---cccHHHhcc--cccceeccccc
Confidence            6899999 5888865 56666555 46777666654433222111111111   123332221  36898886644

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.65  E-value=0.37  Score=33.55  Aligned_cols=33  Identities=27%  Similarity=0.186  Sum_probs=28.6

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCC-------CeEEEEEcCCC
Q 028444            2 KILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTS   35 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g-------~~V~~~~r~~~   35 (209)
                      +|+|+| +|.-|-+.|.+|.++|       ++|+++.+.+.
T Consensus         4 ~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           4 YIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             EEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            799999 6999999999999887       47999988654

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.50  E-value=0.63  Score=32.22  Aligned_cols=31  Identities=13%  Similarity=0.135  Sum_probs=24.8

Q ss_pred             EEEEEcCCChhHHHHHHHHHhCCC--eEEEEEcC
Q 028444            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRR   33 (209)
Q Consensus         2 ~ilItG~~G~IG~~l~~~l~~~g~--~V~~~~r~   33 (209)
                      +++|.| +|++|-.+++.|.+.|+  +|+++++.
T Consensus         6 ~~vIvG-~G~aG~~~A~~Lr~~~~~~~I~li~~e   38 (213)
T d1m6ia1           6 PFLLIG-GGTAAFAAARSIRARDPGARVLIVSED   38 (213)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence            467777 59999999999988775  58888763

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.49  E-value=0.85  Score=31.44  Aligned_cols=30  Identities=17%  Similarity=0.279  Sum_probs=27.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      ++|+|| |..|...|.++.+.|.+|.++.++
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            788994 999999999999999999999864

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=83.35  E-value=2  Score=28.72  Aligned_cols=29  Identities=21%  Similarity=0.493  Sum_probs=22.6

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCC----CeEEEE
Q 028444            1 MKILVSGASGYLGGRLCHALLKQG----HSVRAL   30 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g----~~V~~~   30 (209)
                      |||.|-| -|-|||.+.|.+++++    .+|+.+
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaI   34 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAI   34 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEE
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEE
Confidence            6888887 8999999999998653    445444

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=83.32  E-value=0.75  Score=34.58  Aligned_cols=31  Identities=26%  Similarity=0.267  Sum_probs=27.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      ++|+| +|.-|.-+|.+|.+.|.+|.++-+..
T Consensus         5 ~IIVG-sG~aG~v~A~rLae~g~~VlvLEaG~   35 (360)
T d1kdga1           5 YIIVG-AGPGGIIAADRLSEAGKKVLLLERGG   35 (360)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEEccC
Confidence            67888 68999999999999999999997764

>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TT1465 (TTHA1644)
species: Thermus thermophilus [TaxId: 274]

Probab=82.85  E-value=2.7  Score=28.99  Aligned_cols=70  Identities=9%  Similarity=-0.129  Sum_probs=41.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCceEEEEccCCCHHHHHHHhcCcCEEEEcCc
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi~~a~   74 (209)
                      -+|+||.+++=.++++-..+.|-+|+++.-...............+...|+..+.  ..+++..|++|-+-|
T Consensus        67 ~lv~GGg~GlMgava~ga~~~gG~viGi~~~~~~~~~~~~~~~~~i~~~~~~~Rk--~~m~~~sDafI~lPG  136 (208)
T d1weka_          67 GVVTGGGPGVMEAVNRGAYEAGGVSVGLNIELPHEQKPNPYQTHALSLRYFFVRK--VLFVRYAVGFVFLPG  136 (208)
T ss_dssp             EEEECSCSHHHHHHHHHHHHTTCCEEEEEECCTTCCCCCSCCSEEEEESCHHHHH--HHHHHTEEEEEECSC
T ss_pred             eEEeCCCchHHHHHHhhhhhcCCceeccccccccccccccccceEEecccHHHHH--HHHHhCCCceEEecC
Confidence            4789998888789999988998889887544222111111112222232332222  224567898888776

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.37  E-value=0.21  Score=34.46  Aligned_cols=69  Identities=9%  Similarity=0.007  Sum_probs=47.6

Q ss_pred             EcCCChhHHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCceEEEEccCCCHHHHHHHh--cCcCEEEEcCccC
Q 028444            6 SGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDAC--FGCHVIFHTAALV   76 (209)
Q Consensus         6 tG~~G~IG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~--~~~d~vi~~a~~~   76 (209)
                      |-|+|+.-.++++++ . +.+|+++++++..++.    +.. ..++.+++++..+...+..-.  ..+|.|+--.|.+
T Consensus        31 t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          31 TVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVS  106 (192)
T ss_dssp             TCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECSCC
T ss_pred             cCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeeccchh
Confidence            567777778888876 3 4689999998653221    111 137999999998877665543  4689888777764

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.20  E-value=0.51  Score=32.92  Aligned_cols=91  Identities=18%  Similarity=0.190  Sum_probs=54.3

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCC---eEEEEEcCCCCCCCCCCCCceEEEEcc-------------------CCCHHH
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYGD-------------------VTDYRS   58 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~D-------------------l~~~~~   58 (209)
                      +||.|+| -|+-|..++.++.+.|.   +.+++.-+...+.....  ...+..+.                   ..+.++
T Consensus        16 ~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~--~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~   92 (209)
T d2vapa1          16 AKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKA--DKKILIGKKLTRGLGAGGNPKIGEEAAKESAEE   92 (209)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCC--SEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHH
T ss_pred             CcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCc--chhcccccccccccccccchHHHHHHHHHHHHH
Confidence            3788998 58889999999988874   33344332222222211  11121111                   123457


Q ss_pred             HHHHhcCcCEEEEcCccCCCCCCCccchhhhHHHHHHHHHHHHHhc
Q 028444           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET  104 (209)
Q Consensus        59 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  104 (209)
                      +.+.++++|.||-+||.-..          +---++..+.+.++..
T Consensus        93 I~~~l~~~d~vfi~AGlGGG----------TGsgaapvia~~ake~  128 (209)
T d2vapa1          93 IKAAIQDSDMVFITCGLGGG----------TGTGSAPVVAEISKKI  128 (209)
T ss_dssp             HHHHHTTCSEEEEEEETTSS----------HHHHHHHHHHHHHHHT
T ss_pred             HHHhccCCCEEEEEEeCCCC----------ccccHHHHHHHHHHHc
Confidence            88888999999999996322          2233455577777776

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=82.03  E-value=0.76  Score=34.24  Aligned_cols=32  Identities=25%  Similarity=0.309  Sum_probs=23.9

Q ss_pred             CEEEEE-cCCC-hh--HHHHHHHHHhCCCeEEEEEc
Q 028444            1 MKILVS-GASG-YL--GGRLCHALLKQGHSVRALVR   32 (209)
Q Consensus         1 m~ilIt-G~~G-~I--G~~l~~~l~~~g~~V~~~~r   32 (209)
                      |||+++ +||+ .+  --+|+++|.++||+|+.++.
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            888887 4442 22  24788999999999999874

>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: NADPH-dependent FMN reductase
domain: Hypothetical protein Ylr011wp
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.69  E-value=2.5  Score=28.33  Aligned_cols=75  Identities=11%  Similarity=0.061  Sum_probs=37.6

Q ss_pred             CEEEEEcCC---ChhHHHHHH----HHHh------CCCeEEEEEcCCCCCCCCCCCCce----EEEEccCC--CHHHHHH
Q 028444            1 MKILVSGAS---GYLGGRLCH----ALLK------QGHSVRALVRRTSDISGLPSEGAL----ELVYGDVT--DYRSLVD   61 (209)
Q Consensus         1 m~ilItG~~---G~IG~~l~~----~l~~------~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~Dl~--~~~~~~~   61 (209)
                      |||+|+-||   +..+..+++    .|.+      .|++|..++-....+..+.....+    .....+..  +...+.+
T Consensus         1 MKIlvI~GS~R~~s~~~~la~~~~~~l~~~~~~~~~g~~v~~idL~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (185)
T d1t0ia_           1 MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSR   80 (185)
T ss_dssp             CEEEEEECCCCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHH
T ss_pred             CEEEEEeCCCCCCChHHHHHHHHHHHHHHhhhhcCCCcEEEEEeccccCccccchhhhccccccccccccCCHHHHHHHH
Confidence            888876665   245555554    4433      378999887543222211110000    00001111  1234555


Q ss_pred             HhcCcCEEEEcCcc
Q 028444           62 ACFGCHVIFHTAAL   75 (209)
Q Consensus        62 ~~~~~d~vi~~a~~   75 (209)
                      .+..+|.+|-....
T Consensus        81 ~i~~AD~iIi~tP~   94 (185)
T d1t0ia_          81 IVNALDIIVFVTPQ   94 (185)
T ss_dssp             HHHTCSEEEEEEEC
T ss_pred             HHHhCCCeEEEEee
Confidence            67789999877664

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.51  E-value=0.65  Score=34.14  Aligned_cols=31  Identities=29%  Similarity=0.314  Sum_probs=27.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|..|-..+.++.++|.+|+++.+.+
T Consensus        22 VvVIG-aG~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVG-AGSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78888 69999999999999999999998754

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.35  E-value=1.1  Score=30.57  Aligned_cols=30  Identities=20%  Similarity=0.168  Sum_probs=26.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      ++|+| +|..|...+.++.+.|.+|.++.+.
T Consensus         6 viIIG-~GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIG-GGSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCEEEEEecc
Confidence            67888 4999999999999999999999764

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=81.06  E-value=0.87  Score=33.47  Aligned_cols=31  Identities=32%  Similarity=0.281  Sum_probs=27.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcCC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~   34 (209)
                      |+|+| +|.-|..-|-+++++|.+|.++.+.+
T Consensus         8 VvVIG-~G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIG-GGLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEecCC
Confidence            88999 69999999999999999999997653

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.58  E-value=0.99  Score=27.48  Aligned_cols=34  Identities=15%  Similarity=0.031  Sum_probs=27.5

Q ss_pred             CEEEEEcCCChhHHHHHHHHHhCCCeEEEEEcCCC
Q 028444            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (209)
Q Consensus         1 m~ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~~~   35 (209)
                      ++|+|.| +|-=|.-++..|.+..-+++.+.|+..
T Consensus        33 K~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          33 ESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            4799999 578899999999888877777776544

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.13  E-value=0.86  Score=31.37  Aligned_cols=30  Identities=17%  Similarity=0.087  Sum_probs=26.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCeEEEEEcC
Q 028444            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (209)
Q Consensus         3 ilItG~~G~IG~~l~~~l~~~g~~V~~~~r~   33 (209)
                      ++|+| +|-.|...+.++.+.|.+|.++.++
T Consensus         8 lvVIG-~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIG-GGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCcEEEEecC
Confidence            78999 6899999999999999999998654