BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028446
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHIL
SEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSG
VDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGM
FNFEVIQAAIRIAKQEGLSVSMDLASFEV

High Scoring Gene Products

Symbol, full name Information P value
AT1G19600 protein from Arabidopsis thaliana 1.7e-73
DET_0711
carbohydrate kinase, PfkB family
protein from Dehalococcoides ethenogenes 195 1.5e-07
SPO_3582
kinase, pfkB family
protein from Ruegeria pomeroyi DSS-3 0.00017
SO_2020
inosine-guanosine kinase
protein from Shewanella oneidensis MR-1 0.00082

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028446
        (209 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013094 - symbol:AT1G19600 species:3702 "Arabi...   742  1.7e-73   1
TIGR_CMR|DET_0711 - symbol:DET_0711 "carbohydrate kinase,...   138  1.5e-07   1
TIGR_CMR|SPO_3582 - symbol:SPO_3582 "kinase, pfkB family"...   114  0.00017   1
TIGR_CMR|SO_2020 - symbol:SO_2020 "inosine-guanosine kina...   110  0.00082   1


>TAIR|locus:2013094 [details] [associations]
            symbol:AT1G19600 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016301 "kinase activity"
            evidence=ISS] Pfam:PF00294 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0016301 eggNOG:COG0524 InterPro:IPR011611 EMBL:AC024609
            EMBL:AC025808 HSSP:Q9TVW2 EMBL:BT004821 EMBL:AK227761
            IPI:IPI00525669 PIR:F86328 RefSeq:NP_173390.1 UniGene:At.26831
            ProteinModelPortal:Q9LN35 SMR:Q9LN35 PRIDE:Q9LN35
            EnsemblPlants:AT1G19600.1 GeneID:838547 KEGG:ath:AT1G19600
            TAIR:At1g19600 HOGENOM:HOG000235949 InParanoid:Q9LN35 OMA:LEECCKV
            PhylomeDB:Q9LN35 ProtClustDB:PLN02379 Genevestigator:Q9LN35
            Uniprot:Q9LN35
        Length = 355

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 146/196 (74%), Positives = 167/196 (85%)

Query:    14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSP 73
             +A L+LGLQPAALID+VA VDWSLLDQIPG+RGGSI V  +ELEH+L E+  HI    +P
Sbjct:    11 EAPLVLGLQPAALIDNVAPVDWSLLDQIPGDRGGSIAVQKDELEHMLKELDAHI--SVAP 68

Query:    74 IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
             +K +AGGSVTNT+RGLSVGFGV  G+IGAYGDD+QGQLFVSNM FSGV +SRLR K+G T
Sbjct:    69 LKKMAGGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMGFSGVSISRLRKKKGST 128

Query:   134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
              QCVCLVD SGNRTMRPCLS+AVKIQADEL  ED  GSKWLVLR+ + N +VIQAAIR A
Sbjct:   129 AQCVCLVDDSGNRTMRPCLSSAVKIQADELSKEDFTGSKWLVLRYAVLNLQVIQAAIRFA 188

Query:   194 KQEGLSVSMDLASFEV 209
             KQEGLSVS+DLASFE+
Sbjct:   189 KQEGLSVSLDLASFEM 204


>TIGR_CMR|DET_0711 [details] [associations]
            symbol:DET_0711 "carbohydrate kinase, PfkB family"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0005975
            "carbohydrate metabolic process" evidence=ISS] [GO:0019200
            "carbohydrate kinase activity" evidence=ISS] Pfam:PF00294
            GO:GO:0016301 EMBL:CP000027 GenomeReviews:CP000027_GR
            eggNOG:COG0524 InterPro:IPR011611 HOGENOM:HOG000235950 KO:K00852
            RefSeq:YP_181452.1 ProteinModelPortal:Q3Z8J7 STRING:Q3Z8J7
            GeneID:3229948 KEGG:det:DET0711 PATRIC:21608485
            ProtClustDB:CLSK837320 BioCyc:DETH243164:GJNF-712-MONOMER
            Uniprot:Q3Z8J7
        Length = 328

 Score = 138 (53.6 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 38/103 (36%), Positives = 56/103 (54%)

Query:    47 GSIPVA-IEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGD 105
             G++ V  I  +E IL + +  + +  S      GGS  NTI GLS   G+ CG IGA G+
Sbjct:    12 GAVHVDHIYTVEQILHDGECVVTESAS----FPGGSGANTIHGLS-RLGLKCGFIGAVGN 66

Query:   106 DQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRT 147
             D  G L +S+ + +G+D   L +K    TG  V L ++SG R+
Sbjct:    67 DPDGNLLISDFENAGIDNRYLLVKNEAQTGSVVSLSESSGRRS 109


>TIGR_CMR|SPO_3582 [details] [associations]
            symbol:SPO_3582 "kinase, pfkB family" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic process"
            evidence=ISS] [GO:0016301 "kinase activity" evidence=ISS]
            Pfam:PF00294 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016301
            InterPro:IPR011611 OMA:DPFCVER HOGENOM:HOG000235949
            RefSeq:YP_168777.1 ProteinModelPortal:Q5LMI1 GeneID:3193718
            KEGG:sil:SPO3582 PATRIC:23380641 ProtClustDB:CLSK934217
            Uniprot:Q5LMI1
        Length = 328

 Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
 Identities = 43/170 (25%), Positives = 75/170 (44%)

Query:    25 ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
             A++D +++ D S LD +  E+G    +  E  E + + +K  +    +P     GGSV N
Sbjct:    12 AVVDVISQADDSFLDLMGIEKGIMQLIEQERGEVLYASMKERV---QTP-----GGSVAN 63

Query:    85 TIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVD-VSRLRMKRGPTGQCVCLVDAS 143
             TI G     G+    IG   DD  G  +   M   G+D V+        T + +  V   
Sbjct:    64 TIAGAGA-LGLDTAFIGRVRDDALGHFYADAMNEGGIDFVNPPVAGELATSRSMIFVSPD 122

Query:   144 GNRTMRPCLSNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIA 193
             G R+M   L  +  + + ++  E    +K + L   +F+ +  ++A R A
Sbjct:   123 GERSMNTYLGISTTLSSADVPQEVTGNAKLMFLEGYLFDHDAGKSAFREA 172


>TIGR_CMR|SO_2020 [details] [associations]
            symbol:SO_2020 "inosine-guanosine kinase" species:211586
            "Shewanella oneidensis MR-1" [GO:0008906 "inosine kinase activity"
            evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
            interconversion" evidence=ISS] Pfam:PF00294 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR011611 HOGENOM:HOG000278653
            KO:K00892 OMA:IRNTNGA ProtClustDB:PRK15074 GO:GO:0008906
            RefSeq:NP_717626.1 ProteinModelPortal:Q8EFF3 GeneID:1169772
            KEGG:son:SO_2020 PATRIC:23523661 Uniprot:Q8EFF3
        Length = 434

 Score = 110 (43.8 bits), Expect = 0.00082, P = 0.00082
 Identities = 46/168 (27%), Positives = 76/168 (45%)

Query:    15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTH--ILDEPS 72
             A  I G+    L+D  A+V+  LL +    +G S  +  E+   + +E+K +  I DE  
Sbjct:    33 ATYISGIDQT-LVDIEAKVEDELLSRYGLPKGNSTLINDEQAHTLYTELKQNGLISDE-- 89

Query:    73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDD-QQGQL---FVSNMQFSGVDVSRLRM 128
                  AGG++ NT+   S+       L G    + + G     ++ N   S VD++ L+ 
Sbjct:    90 ----FAGGTIGNTVHNYSILADDRSVLFGVMSQNIEVGSYAYRYLCNTS-SKVDLNYLQP 144

Query:   129 KRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL 176
               GP G+C  L+   G RT         K+  + +  + V+GS  LVL
Sbjct:   145 VDGPIGRCFTLISDCGERTFAISKGAMDKLTPEYIDKDIVQGSSALVL 192


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      209       209   0.00079  112 3  11 22  0.49    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  156 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.62u 0.11s 18.73t   Elapsed:  00:00:01
  Total cpu time:  18.62u 0.11s 18.73t   Elapsed:  00:00:01
  Start:  Mon May 20 17:35:24 2013   End:  Mon May 20 17:35:25 2013

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