Query 028446
Match_columns 209
No_of_seqs 171 out of 1743
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 19:19:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3a_A Sugar kinase protein; s 100.0 1.1E-31 3.8E-36 229.3 21.6 184 13-206 23-211 (352)
2 3uq6_A Adenosine kinase, putat 100.0 4E-31 1.4E-35 227.4 16.5 193 6-207 14-219 (372)
3 3otx_A Adenosine kinase, putat 100.0 1.1E-29 3.9E-34 215.9 17.9 185 13-206 5-200 (347)
4 3vas_A Putative adenosine kina 100.0 3.1E-29 1.1E-33 215.4 17.3 184 14-206 23-216 (370)
5 3loo_A Anopheles gambiae adeno 100.0 6.6E-29 2.2E-33 213.0 16.3 192 6-206 11-214 (365)
6 3go6_A Ribokinase RBSK; phosph 99.9 1.4E-26 4.8E-31 194.5 19.9 163 13-207 17-179 (310)
7 3ry7_A Ribokinase; transferase 99.9 9.4E-27 3.2E-31 194.2 17.7 163 16-207 3-169 (304)
8 3ikh_A Carbohydrate kinase; tr 99.9 2.6E-27 8.7E-32 197.8 13.7 165 14-207 1-167 (299)
9 1rkd_A Ribokinase; carbohydrat 99.9 9.9E-27 3.4E-31 194.6 16.4 164 15-207 4-170 (309)
10 2fv7_A Ribokinase; structural 99.9 2E-26 7E-31 194.9 16.3 173 6-207 14-190 (331)
11 2rbc_A Sugar kinase, AGR_C_456 99.9 5.7E-26 2E-30 193.3 18.9 164 14-207 28-192 (343)
12 3ljs_A Fructokinase; fructokia 99.9 4.7E-26 1.6E-30 192.9 17.0 160 14-206 3-169 (338)
13 1bx4_A Protein (adenosine kina 99.9 3.1E-25 1.1E-29 188.3 19.8 184 14-206 5-199 (345)
14 2c4e_A Sugar kinase MJ0406; tr 99.9 1E-25 3.4E-30 188.2 14.7 157 16-206 6-163 (302)
15 3hj6_A Fructokinase, FRK; fruc 99.9 1.6E-25 5.4E-30 189.0 14.6 160 14-206 20-184 (327)
16 2hlz_A Ketohexokinase; non-pro 99.9 1.2E-24 4.1E-29 182.6 17.8 165 13-207 15-189 (312)
17 1vm7_A Ribokinase; TM0960, str 99.9 1.4E-24 4.9E-29 182.1 17.2 159 14-207 13-173 (311)
18 2abs_A Adenosine kinase, AK; r 99.9 4E-24 1.4E-28 184.2 20.0 183 14-206 31-219 (383)
19 3kzh_A Probable sugar kinase; 99.9 1.2E-24 4.2E-29 183.6 15.5 162 13-206 4-169 (328)
20 2nwh_A AGR_C_3442P, carbohydra 99.9 2.9E-24 1E-28 180.5 16.6 161 16-206 4-169 (317)
21 3h49_A Ribokinase; transferase 99.9 5E-24 1.7E-28 179.6 17.2 162 13-205 3-173 (325)
22 3lhx_A Ketodeoxygluconokinase; 99.9 4.6E-24 1.6E-28 179.4 15.1 153 14-206 3-171 (319)
23 4du5_A PFKB; structural genomi 99.9 9.3E-24 3.2E-28 178.9 17.0 159 14-205 25-192 (336)
24 3ktn_A Carbohydrate kinase, PF 99.9 2.8E-23 9.7E-28 176.3 19.2 158 15-205 2-169 (346)
25 2qcv_A Putative 5-dehydro-2-de 99.9 2.7E-23 9.2E-28 175.4 18.8 161 14-206 10-178 (332)
26 3ewm_A Uncharacterized sugar k 99.9 1.7E-23 5.7E-28 175.5 17.0 156 16-206 2-163 (313)
27 3iq0_A Putative ribokinase II; 99.9 5.3E-23 1.8E-27 173.7 19.9 162 15-207 3-171 (330)
28 1v1a_A 2-keto-3-deoxygluconate 99.9 3.8E-23 1.3E-27 172.9 18.9 158 16-206 2-166 (309)
29 2pkf_A Adenosine kinase; trans 99.9 9E-24 3.1E-28 178.9 15.1 164 16-206 11-182 (334)
30 3b1n_A Ribokinase, putative; r 99.9 1.1E-23 3.9E-28 177.8 14.2 161 17-206 2-169 (326)
31 3pl2_A Sugar kinase, ribokinas 99.9 1.9E-23 6.6E-28 175.3 15.1 160 13-205 6-173 (319)
32 3bf5_A Ribokinase related prot 99.9 1.4E-23 4.8E-28 175.8 12.7 156 8-206 13-169 (306)
33 4e69_A 2-dehydro-3-deoxyglucon 99.9 3.7E-23 1.3E-27 174.8 15.4 155 13-206 21-187 (328)
34 1tyy_A Putative sugar kinase; 99.9 4.8E-23 1.6E-27 174.8 15.4 150 16-206 25-181 (339)
35 3ie7_A LIN2199 protein; phosph 99.9 1.5E-22 5.1E-27 170.1 18.2 157 18-206 4-172 (320)
36 2ajr_A Sugar kinase, PFKB fami 99.9 1.2E-22 4.2E-27 171.6 15.7 163 14-206 11-185 (331)
37 3umo_A 6-phosphofructokinase i 99.9 2.7E-22 9.1E-27 167.7 17.2 158 17-206 3-169 (309)
38 4gm6_A PFKB family carbohydrat 99.9 1.5E-22 5.1E-27 172.1 14.5 160 14-206 23-191 (351)
39 3cqd_A 6-phosphofructokinase i 99.9 5.2E-22 1.8E-26 165.9 17.1 157 17-206 3-169 (309)
40 2jg1_A Tagatose-6-phosphate ki 99.9 4.6E-22 1.6E-26 168.1 16.5 164 6-206 14-186 (330)
41 2f02_A Tagatose-6-phosphate ki 99.9 9.4E-22 3.2E-26 165.6 17.3 158 15-206 2-168 (323)
42 2dcn_A Hypothetical fructokina 99.9 9.1E-22 3.1E-26 164.6 15.5 154 16-206 2-165 (311)
43 2v78_A Fructokinase; transfera 99.9 9.1E-22 3.1E-26 164.8 15.2 154 16-206 2-165 (313)
44 4e84_A D-beta-D-heptose 7-phos 99.9 1.1E-21 3.6E-26 167.5 11.0 166 13-206 51-223 (352)
45 2qhp_A Fructokinase; NP_810670 99.9 6.2E-21 2.1E-25 158.4 14.1 128 76-206 21-155 (296)
46 2abq_A Fructose 1-phosphate ki 99.9 1.4E-20 4.7E-25 157.2 16.2 155 18-206 2-164 (306)
47 2jg5_A Fructose 1-phosphate ki 99.8 2.9E-20 1E-24 155.0 15.9 153 19-206 4-164 (306)
48 2afb_A 2-keto-3-deoxygluconate 99.8 2E-19 6.9E-24 152.8 17.2 132 73-206 38-179 (351)
49 3kd6_A Carbohydrate kinase, PF 99.8 1.4E-18 4.9E-23 145.6 12.9 146 15-205 2-151 (313)
50 1vk4_A PFKB carbohydrate kinas 99.7 2.3E-18 7.8E-23 143.4 7.2 125 73-206 30-154 (298)
51 2yxt_A Pyridoxal kinase; beta 97.8 4.3E-06 1.5E-10 69.3 1.5 91 96-206 12-116 (312)
52 2ddm_A Pyridoxine kinase; pyri 97.1 0.00022 7.4E-09 58.1 2.9 98 92-206 18-128 (283)
53 1jxh_A Phosphomethylpyrimidine 94.8 0.0094 3.2E-07 48.5 1.7 98 97-207 26-131 (288)
54 1gc5_A ADP-dependent glucokina 94.5 0.19 6.6E-06 43.8 9.4 125 77-207 117-283 (467)
55 1ua4_A Glucokinase, ADP-depend 94.4 0.32 1.1E-05 42.3 10.4 126 76-207 108-270 (455)
56 3drw_A ADP-specific phosphofru 94.0 0.41 1.4E-05 41.9 10.3 177 15-207 27-286 (474)
57 1l2l_A ADP-dependent glucokina 93.7 0.15 5.2E-06 44.4 7.0 125 77-207 112-273 (457)
58 1ub0_A THID, phosphomethylpyri 89.1 0.26 9E-06 38.8 3.2 97 98-206 3-106 (258)
59 1ekq_A Hydroxyethylthiazole ki 82.9 1.3 4.3E-05 35.6 4.3 55 151-206 38-97 (272)
60 3dzv_A 4-methyl-5-(beta-hydrox 82.3 2.1 7.1E-05 34.6 5.4 53 153-206 40-97 (273)
61 3hpd_A Hydroxyethylthiazole ki 79.0 1.3 4.6E-05 35.6 3.1 42 166-207 52-96 (265)
62 2fq6_A Cystathionine beta-lyas 77.9 8 0.00027 32.7 7.9 36 170-205 167-207 (415)
63 2i5b_A Phosphomethylpyrimidine 75.5 4.4 0.00015 31.9 5.3 36 170-206 74-110 (271)
64 3ndn_A O-succinylhomoserine su 73.1 12 0.00041 31.5 7.8 37 169-205 165-204 (414)
65 1v8a_A Hydroxyethylthiazole ki 70.0 4 0.00014 32.5 3.8 41 166-206 52-95 (265)
66 1t4b_A Aspartate-semialdehyde 69.7 34 0.0012 28.5 9.7 93 100-207 4-100 (367)
67 3nl6_A Thiamine biosynthetic b 69.7 5.1 0.00017 35.5 4.7 54 153-207 287-344 (540)
68 3ri6_A O-acetylhomoserine sulf 67.6 28 0.00097 29.5 8.9 37 169-205 166-205 (430)
69 3tz6_A Aspartate-semialdehyde 65.3 36 0.0012 28.2 8.8 88 100-206 4-95 (344)
70 3pwk_A Aspartate-semialdehyde 65.2 41 0.0014 28.1 9.2 89 100-206 5-96 (366)
71 3qhx_A Cystathionine gamma-syn 62.6 23 0.0008 29.3 7.4 37 169-205 150-189 (392)
72 3nmy_A Xometc, cystathionine g 61.4 27 0.00092 29.2 7.5 37 169-205 151-190 (400)
73 3hvy_A Cystathionine beta-lyas 61.0 67 0.0023 27.2 10.0 48 158-205 162-220 (427)
74 3fdb_A Beta C-S lyase, putativ 60.4 64 0.0022 25.8 9.8 48 158-205 138-191 (377)
75 3mbh_A Putative phosphomethylp 54.1 15 0.00052 29.4 4.6 37 170-206 77-115 (291)
76 1e5e_A MGL, methionine gamma-l 53.9 54 0.0019 27.1 8.2 37 169-205 146-186 (404)
77 3lvm_A Cysteine desulfurase; s 53.1 59 0.002 26.6 8.3 48 158-205 151-201 (423)
78 3op7_A Aminotransferase class 52.3 70 0.0024 25.6 8.5 37 169-205 153-195 (375)
79 3pzs_A PM kinase, pyridoxamine 50.3 16 0.00054 29.1 4.1 37 169-205 76-116 (289)
80 4hvk_A Probable cysteine desul 50.0 37 0.0013 27.1 6.4 47 158-205 126-175 (382)
81 2dh2_A 4F2 cell-surface antige 50.0 21 0.00073 30.2 5.1 36 171-206 69-104 (424)
82 1wza_A Alpha-amylase A; hydrol 49.8 22 0.00075 30.6 5.2 35 171-205 69-103 (488)
83 2r00_A Aspartate-semialdehyde 49.7 90 0.0031 25.5 8.7 88 100-206 6-97 (336)
84 1lwj_A 4-alpha-glucanotransfer 49.5 20 0.00068 30.4 4.8 34 172-205 58-91 (441)
85 3uw3_A Aspartate-semialdehyde 49.2 1.1E+02 0.0037 25.6 9.2 92 95-206 5-102 (377)
86 2hjs_A USG-1 protein homolog; 49.1 1.1E+02 0.0037 25.0 9.8 35 168-206 66-100 (340)
87 1gc0_A Methionine gamma-lyase; 48.8 57 0.002 26.7 7.5 36 170-205 150-188 (398)
88 1y81_A Conserved hypothetical 48.6 67 0.0023 22.5 10.6 23 100-122 17-43 (138)
89 4aie_A Glucan 1,6-alpha-glucos 48.6 20 0.00069 30.9 4.8 34 172-205 68-101 (549)
90 3pzr_A Aspartate-semialdehyde 48.3 1.2E+02 0.0041 25.3 10.0 38 166-206 60-98 (370)
91 1qgn_A Protein (cystathionine 48.0 44 0.0015 28.5 6.7 36 170-205 199-238 (445)
92 3h14_A Aminotransferase, class 47.7 1.1E+02 0.0037 24.6 10.4 36 170-205 161-202 (391)
93 3jtx_A Aminotransferase; NP_28 47.2 45 0.0015 27.0 6.6 48 158-205 156-209 (396)
94 4aef_A Neopullulanase (alpha-a 45.7 22 0.00076 31.8 4.7 24 182-205 284-307 (645)
95 2rfv_A Methionine gamma-lyase; 45.5 81 0.0028 25.7 7.9 37 169-205 148-187 (398)
96 1ys4_A Aspartate-semialdehyde 45.0 25 0.00085 29.1 4.6 33 170-206 83-115 (354)
97 2guy_A Alpha-amylase A; (beta- 44.9 25 0.00085 30.1 4.7 34 172-205 86-119 (478)
98 3nyt_A Aminotransferase WBPE; 44.5 1.2E+02 0.0041 24.2 9.1 48 158-205 111-158 (367)
99 3acz_A Methionine gamma-lyase; 44.5 81 0.0028 25.8 7.8 36 170-205 144-182 (389)
100 2wc7_A Alpha amylase, catalyti 44.0 22 0.00074 30.6 4.2 34 172-205 91-124 (488)
101 2z1k_A (NEO)pullulanase; hydro 43.5 27 0.00091 29.8 4.7 32 174-205 87-118 (475)
102 2aaa_A Alpha-amylase; glycosid 43.5 25 0.00084 30.2 4.5 34 172-205 86-119 (484)
103 3frk_A QDTB; aminotransferase, 42.7 1.3E+02 0.0044 24.0 9.2 48 158-205 112-159 (373)
104 3edf_A FSPCMD, cyclomaltodextr 41.6 30 0.001 30.8 4.8 35 171-205 186-220 (601)
105 2re2_A Uncharacterized protein 41.4 16 0.00054 25.9 2.4 38 79-123 65-102 (136)
106 1m53_A Isomaltulose synthase; 41.3 30 0.001 30.5 4.8 34 172-205 81-114 (570)
107 1zja_A Trehalulose synthase; s 41.1 34 0.0012 30.0 5.1 35 171-205 67-101 (557)
108 3e5d_A Putative glyoxalase I; 40.8 68 0.0023 20.8 5.7 41 109-149 85-125 (127)
109 2raf_A Putative dinucleotide-b 40.6 1.1E+02 0.0038 22.7 7.9 25 99-123 21-45 (209)
110 1qho_A Alpha-amylase; glycosid 40.4 30 0.001 31.3 4.7 34 172-205 96-129 (686)
111 4aee_A Alpha amylase, catalyti 40.4 30 0.001 31.4 4.7 24 182-205 310-333 (696)
112 1d3c_A Cyclodextrin glycosyltr 40.1 30 0.001 31.2 4.7 34 172-205 104-137 (686)
113 3bmv_A Cyclomaltodextrin gluca 40.1 31 0.001 31.2 4.7 34 172-205 105-138 (683)
114 4gqr_A Pancreatic alpha-amylas 40.1 22 0.00074 30.1 3.5 24 182-205 75-98 (496)
115 2zic_A Dextran glucosidase; TI 39.9 31 0.001 30.2 4.6 35 171-205 66-100 (543)
116 2d59_A Hypothetical protein PH 39.8 95 0.0033 21.7 9.8 28 95-122 23-51 (144)
117 1uok_A Oligo-1,6-glucosidase; 39.4 34 0.0012 30.0 4.8 34 172-205 67-100 (558)
118 1cyg_A Cyclodextrin glucanotra 39.3 32 0.0011 31.1 4.7 34 172-205 100-133 (680)
119 3ffr_A Phosphoserine aminotran 39.1 94 0.0032 24.4 7.2 102 74-205 64-169 (362)
120 1wzl_A Alpha-amylase II; pullu 39.0 35 0.0012 30.2 4.8 24 182-205 218-241 (585)
121 2cb1_A O-acetyl homoserine sul 38.6 91 0.0031 25.7 7.2 37 169-205 139-178 (412)
122 1j0h_A Neopullulanase; beta-al 38.5 39 0.0013 29.9 5.0 24 182-205 221-244 (588)
123 3h74_A Pyridoxal kinase; PSI-I 38.4 49 0.0017 26.2 5.2 36 170-206 74-110 (282)
124 3meb_A Aspartate aminotransfer 37.9 1.6E+02 0.0054 24.5 8.7 23 182-204 220-242 (448)
125 3aj7_A Oligo-1,6-glucosidase; 37.7 41 0.0014 29.8 5.1 35 171-205 75-109 (589)
126 1ua7_A Alpha-amylase; beta-alp 37.5 34 0.0012 28.8 4.4 34 172-205 63-96 (422)
127 2p7o_A Glyoxalase family prote 37.5 61 0.0021 21.4 5.1 45 109-153 79-123 (133)
128 2ze0_A Alpha-glucosidase; TIM 37.5 38 0.0013 29.7 4.8 34 172-205 67-100 (555)
129 1p9l_A Dihydrodipicolinate red 37.5 1.2E+02 0.004 23.7 7.2 26 100-125 3-30 (245)
130 2pv7_A T-protein [includes: ch 37.4 95 0.0033 24.5 6.9 24 100-123 24-48 (298)
131 3pj0_A LMO0305 protein; struct 37.4 56 0.0019 26.0 5.5 46 158-204 126-178 (359)
132 3itw_A Protein TIOX; bleomycin 37.4 70 0.0024 21.4 5.4 54 109-164 79-132 (137)
133 3kgw_A Alanine-glyoxylate amin 37.3 69 0.0024 25.6 6.2 105 74-205 77-186 (393)
134 2yrr_A Aminotransferase, class 36.7 42 0.0014 26.4 4.6 104 74-205 55-162 (353)
135 2ctz_A O-acetyl-L-homoserine s 36.4 82 0.0028 26.1 6.6 37 169-205 143-182 (421)
136 1b5p_A Protein (aspartate amin 35.7 35 0.0012 27.7 4.1 36 170-205 164-205 (385)
137 1gd9_A Aspartate aminotransfer 35.6 35 0.0012 27.6 4.1 48 158-205 148-201 (389)
138 3nra_A Aspartate aminotransfer 35.1 1.7E+02 0.0059 23.4 12.5 48 158-205 167-220 (407)
139 1v2d_A Glutamine aminotransfer 34.7 38 0.0013 27.4 4.1 37 169-205 151-193 (381)
140 2dha_A FLJ20171 protein; RRM d 34.6 66 0.0023 22.0 4.8 43 77-120 6-48 (123)
141 1i4n_A Indole-3-glycerol phosp 34.6 57 0.0019 25.7 4.9 42 165-206 118-159 (251)
142 3zs7_A Pyridoxal kinase; trans 34.3 29 0.001 27.8 3.3 36 169-205 75-119 (300)
143 3dr3_A N-acetyl-gamma-glutamyl 33.7 2E+02 0.0067 23.6 9.7 94 100-206 7-107 (337)
144 1g94_A Alpha-amylase; beta-alp 33.5 29 0.00098 29.5 3.3 23 182-204 63-85 (448)
145 3tsm_A IGPS, indole-3-glycerol 33.2 66 0.0023 25.6 5.2 45 162-206 134-178 (272)
146 3ezs_A Aminotransferase ASPB; 32.8 75 0.0026 25.4 5.7 37 169-205 153-195 (376)
147 2dou_A Probable N-succinyldiam 32.7 51 0.0017 26.5 4.6 47 159-205 147-199 (376)
148 1u08_A Hypothetical aminotrans 32.5 1.9E+02 0.0065 23.1 10.9 48 158-205 151-204 (386)
149 3uh9_A Metallothiol transferas 32.4 90 0.0031 21.0 5.3 44 109-152 76-119 (145)
150 3rpz_A ADP/ATP-dependent NAD(P 32.4 36 0.0012 27.3 3.5 40 167-206 95-134 (279)
151 3l7t_A SMU.1112C, putative unc 32.3 1E+02 0.0035 19.9 5.6 46 100-147 85-130 (134)
152 3euc_A Histidinol-phosphate am 32.2 49 0.0017 26.5 4.4 49 157-205 143-200 (367)
153 1eg5_A Aminotransferase; PLP-d 32.1 1.9E+02 0.0064 22.8 8.6 48 158-205 127-179 (384)
154 2duw_A Putative COA-binding pr 32.0 1.3E+02 0.0045 21.0 7.7 27 96-122 15-42 (145)
155 1wpc_A Glucan 1,4-alpha-maltoh 31.6 37 0.0013 29.1 3.7 24 182-205 81-104 (485)
156 1ud2_A Amylase, alpha-amylase; 31.6 37 0.0013 29.0 3.7 24 182-205 79-102 (480)
157 3bh4_A Alpha-amylase; calcium, 31.5 37 0.0013 29.0 3.7 24 182-205 77-100 (483)
158 1vjo_A Alanine--glyoxylate ami 31.5 1.4E+02 0.0049 23.8 7.2 105 74-205 88-197 (393)
159 3iwt_A 178AA long hypothetical 31.3 44 0.0015 24.4 3.6 20 86-106 46-65 (178)
160 3ftb_A Histidinol-phosphate am 30.9 89 0.003 24.7 5.8 38 168-205 142-185 (361)
161 3ghj_A Putative integron gene 30.9 98 0.0034 21.0 5.3 41 109-149 98-138 (141)
162 3g0t_A Putative aminotransfera 30.7 36 0.0012 28.1 3.4 37 169-205 181-223 (437)
163 2ch1_A 3-hydroxykynurenine tra 30.4 1.9E+02 0.0066 23.0 7.8 105 74-205 72-181 (396)
164 3qja_A IGPS, indole-3-glycerol 30.2 70 0.0024 25.4 4.8 47 159-206 124-171 (272)
165 1ht6_A AMY1, alpha-amylase iso 30.1 41 0.0014 28.1 3.7 24 182-205 67-90 (405)
166 2bhu_A Maltooligosyltrehalose 30.1 58 0.002 29.0 4.8 33 173-205 182-214 (602)
167 3if2_A Aminotransferase; YP_26 29.8 49 0.0017 27.4 4.1 37 169-205 205-247 (444)
168 3kax_A Aminotransferase, class 29.8 58 0.002 26.1 4.4 48 158-205 144-197 (383)
169 3rss_A Putative uncharacterize 29.6 1E+02 0.0034 26.9 6.1 40 166-205 316-356 (502)
170 3ele_A Amino transferase; RER0 29.5 58 0.002 26.4 4.4 47 158-204 160-218 (398)
171 1m7x_A 1,4-alpha-glucan branch 29.0 69 0.0024 28.5 5.1 34 172-205 193-226 (617)
172 3ht4_A Aluminum resistance pro 28.9 1.1E+02 0.0037 25.8 6.1 47 158-204 153-208 (431)
173 1jg8_A L-ALLO-threonine aldola 28.8 62 0.0021 25.5 4.4 35 170-204 132-173 (347)
174 3dzz_A Putative pyridoxal 5'-p 28.7 70 0.0024 25.6 4.8 47 158-205 147-201 (391)
175 1c7n_A Cystalysin; transferase 28.6 58 0.002 26.4 4.3 36 170-205 164-205 (399)
176 1hvx_A Alpha-amylase; hydrolas 28.6 48 0.0017 28.7 3.9 24 182-205 80-103 (515)
177 2o0r_A RV0858C (N-succinyldiam 28.6 64 0.0022 26.4 4.6 37 169-205 159-201 (411)
178 1mxg_A Alpha amylase; hyperthe 28.6 50 0.0017 27.9 3.9 24 182-205 85-108 (435)
179 2l8b_A Protein TRAI, DNA helic 28.5 71 0.0024 24.1 4.3 34 169-202 120-154 (189)
180 1jae_A Alpha-amylase; glycosid 28.1 40 0.0014 28.8 3.3 24 182-205 73-96 (471)
181 1v72_A Aldolase; PLP-dependent 28.0 61 0.0021 25.5 4.2 35 170-204 141-180 (356)
182 3kol_A Oxidoreductase, glyoxal 27.9 1.4E+02 0.0047 20.0 5.7 41 109-150 109-149 (156)
183 1gcy_A Glucan 1,4-alpha-maltot 27.8 46 0.0016 28.9 3.7 24 182-205 91-114 (527)
184 1svv_A Threonine aldolase; str 27.8 76 0.0026 25.0 4.8 35 171-205 146-185 (359)
185 2lkz_A RNA-binding protein 5; 27.7 65 0.0022 20.9 3.6 37 93-129 7-44 (95)
186 3fvs_A Kynurenine--oxoglutarat 27.7 58 0.002 26.6 4.2 48 158-205 162-215 (422)
187 2yv3_A Aspartate-semialdehyde 27.4 2.5E+02 0.0084 22.7 9.1 88 100-206 3-93 (331)
188 3qgu_A LL-diaminopimelate amin 26.9 73 0.0025 26.4 4.7 36 169-204 208-249 (449)
189 3e2y_A Kynurenine-oxoglutarate 26.4 60 0.002 26.4 4.0 37 169-205 166-208 (410)
190 2p25_A Glyoxalase family prote 26.4 1.3E+02 0.0044 19.2 6.2 38 110-147 85-122 (126)
191 3g7q_A Valine-pyruvate aminotr 26.2 1.2E+02 0.0042 24.5 5.9 36 169-204 179-220 (417)
192 3ei9_A LL-diaminopimelate amin 25.8 79 0.0027 26.0 4.7 36 169-204 197-238 (432)
193 3jzl_A Putative cystathionine 25.8 1.5E+02 0.0051 24.7 6.4 48 158-205 147-203 (409)
194 1xqa_A Glyoxalase/bleomycin re 25.8 1.3E+02 0.0045 19.0 5.2 38 109-149 74-111 (113)
195 2gb3_A Aspartate aminotransfer 25.6 1.1E+02 0.0038 24.9 5.6 36 170-205 174-215 (409)
196 1o4s_A Aspartate aminotransfer 25.4 64 0.0022 26.2 4.0 48 158-205 162-215 (389)
197 3b46_A Aminotransferase BNA3; 25.3 55 0.0019 27.4 3.6 37 169-205 200-242 (447)
198 3ucq_A Amylosucrase; thermosta 25.1 77 0.0026 28.5 4.7 34 172-205 149-182 (655)
199 2nqt_A N-acetyl-gamma-glutamyl 25.0 79 0.0027 26.1 4.4 92 100-207 12-112 (352)
200 2rk0_A Glyoxalase/bleomycin re 24.9 1.4E+02 0.0049 19.7 5.2 41 108-150 85-125 (136)
201 2o1b_A Aminotransferase, class 24.9 74 0.0025 26.0 4.3 48 158-205 169-222 (404)
202 2re1_A Aspartokinase, alpha an 24.9 1.8E+02 0.0061 20.8 6.0 43 96-140 102-149 (167)
203 3piu_A 1-aminocyclopropane-1-c 24.9 59 0.002 26.9 3.7 36 170-205 191-232 (435)
204 3ic5_A Putative saccharopine d 24.5 69 0.0024 20.6 3.4 36 166-205 65-100 (118)
205 3ly1_A Putative histidinol-pho 24.5 72 0.0025 25.2 4.1 47 158-205 127-181 (354)
206 3h7a_A Short chain dehydrogena 24.4 93 0.0032 23.7 4.6 46 79-127 17-62 (252)
207 3m07_A Putative alpha amylase; 24.4 95 0.0033 27.7 5.1 24 182-205 201-224 (618)
208 3oiz_A Antisigma-factor antago 24.4 1.1E+02 0.0037 19.8 4.3 34 169-202 42-81 (99)
209 2dr1_A PH1308 protein, 386AA l 24.4 2.6E+02 0.0089 22.0 10.9 105 74-205 74-184 (386)
210 3fwy_A Light-independent proto 24.3 61 0.0021 26.2 3.5 20 82-102 65-84 (314)
211 1j32_A Aspartate aminotransfer 24.1 70 0.0024 25.7 4.0 47 158-204 151-203 (388)
212 3o8q_A Shikimate 5-dehydrogena 24.1 2.6E+02 0.009 22.0 8.5 31 171-203 213-243 (281)
213 2bkw_A Alanine-glyoxylate amin 24.1 1.9E+02 0.0065 22.8 6.6 48 158-205 124-177 (385)
214 1ji1_A Alpha-amylase I; beta/a 24.1 74 0.0025 28.4 4.3 24 182-205 237-264 (637)
215 1yiz_A Kynurenine aminotransfe 24.0 70 0.0024 26.3 4.0 48 158-205 170-223 (429)
216 3bqx_A Glyoxalase-related enzy 24.0 1.7E+02 0.0059 19.8 5.9 43 108-150 82-124 (150)
217 3dhu_A Alpha-amylase; structur 24.0 61 0.0021 27.3 3.7 24 182-205 82-105 (449)
218 4g6x_A Glyoxalase/bleomycin re 23.9 1.6E+02 0.0056 20.1 5.5 39 110-149 110-148 (155)
219 3l8a_A METC, putative aminotra 23.5 77 0.0026 26.0 4.2 48 158-205 181-235 (421)
220 4adb_A Succinylornithine trans 23.5 79 0.0027 25.6 4.2 36 169-204 182-224 (406)
221 3asa_A LL-diaminopimelate amin 23.5 1.4E+02 0.0048 24.2 5.7 37 169-205 162-204 (400)
222 3i16_A Aluminum resistance pro 23.4 1.8E+02 0.0063 24.4 6.6 48 158-205 162-220 (427)
223 2dc1_A L-aspartate dehydrogena 23.4 2.4E+02 0.0081 21.2 8.7 25 100-124 3-27 (236)
224 3civ_A Endo-beta-1,4-mannanase 23.4 64 0.0022 26.5 3.5 23 182-204 95-117 (343)
225 2ozp_A N-acetyl-gamma-glutamyl 23.1 3E+02 0.01 22.3 7.6 35 168-206 66-100 (345)
226 3r1i_A Short-chain type dehydr 23.0 1.1E+02 0.0039 23.7 4.9 46 79-127 42-87 (276)
227 2ep5_A 350AA long hypothetical 23.0 2.1E+02 0.0073 23.3 6.7 36 167-206 74-109 (350)
228 3v7e_A Ribosome-associated pro 23.0 1.5E+02 0.0051 18.7 4.9 36 169-205 26-61 (82)
229 3aml_A OS06G0726400 protein; s 22.9 92 0.0031 28.6 4.8 24 182-205 249-272 (755)
230 3bc9_A AMYB, alpha amylase, ca 22.8 56 0.0019 29.1 3.3 24 182-205 207-230 (599)
231 3vgf_A Malto-oligosyltrehalose 22.7 90 0.0031 27.3 4.6 24 182-205 166-189 (558)
232 3tcm_A Alanine aminotransferas 22.7 77 0.0026 27.1 4.1 35 170-204 237-277 (500)
233 4fn4_A Short chain dehydrogena 22.6 1E+02 0.0035 24.0 4.5 46 80-128 18-63 (254)
234 3uf0_A Short-chain dehydrogena 22.6 1.3E+02 0.0045 23.2 5.2 45 79-127 41-85 (273)
235 1d2f_A MALY protein; aminotran 22.3 62 0.0021 26.1 3.3 36 170-205 162-203 (390)
236 2vt1_B Surface presentation of 22.1 67 0.0023 21.3 2.8 22 183-204 26-47 (93)
237 3m2o_A Glyoxalase/bleomycin re 22.0 2E+02 0.0069 19.9 5.8 49 100-151 94-143 (164)
238 2rbb_A Glyoxalase/bleomycin re 22.0 1.8E+02 0.0062 19.3 5.4 42 109-150 89-130 (141)
239 3lyl_A 3-oxoacyl-(acyl-carrier 21.9 1.1E+02 0.0037 23.0 4.5 46 79-127 15-60 (247)
240 3rm5_A Hydroxymethylpyrimidine 21.7 90 0.0031 27.4 4.3 36 170-206 91-128 (550)
241 2h6r_A Triosephosphate isomera 21.7 1.2E+02 0.0042 22.9 4.7 39 169-207 81-121 (219)
242 1iv8_A Maltooligosyl trehalose 21.6 96 0.0033 28.4 4.6 25 182-206 64-88 (720)
243 1rdu_A Conserved hypothetical 21.6 26 0.0009 23.6 0.7 39 79-123 48-86 (116)
244 1o69_A Aminotransferase; struc 21.6 74 0.0025 25.9 3.6 36 170-205 122-157 (394)
245 3nnk_A Ureidoglycine-glyoxylat 21.6 1.3E+02 0.0045 24.1 5.2 102 77-205 70-176 (411)
246 3ey7_A Biphenyl-2,3-DIOL 1,2-d 21.4 1.7E+02 0.0059 18.8 5.6 42 109-150 84-128 (133)
247 1xi9_A Putative transaminase; 21.3 67 0.0023 26.2 3.3 36 170-205 174-215 (406)
248 3ucx_A Short chain dehydrogena 21.3 1.3E+02 0.0046 22.9 4.9 47 78-127 20-66 (264)
249 3k1d_A 1,4-alpha-glucan-branch 21.1 1.3E+02 0.0044 27.5 5.3 24 183-206 312-335 (722)
250 2wfb_A Putative uncharacterize 21.1 37 0.0013 23.1 1.4 39 79-123 53-91 (120)
251 1ea9_C Cyclomaltodextrinase; h 21.1 77 0.0026 27.9 3.8 24 183-206 218-241 (583)
252 1lc5_A COBD, L-threonine-O-3-p 21.0 1.1E+02 0.0039 24.2 4.6 37 169-205 145-187 (364)
253 2ywl_A Thioredoxin reductase r 21.0 99 0.0034 21.8 3.9 42 82-124 13-74 (180)
254 1r9c_A Glutathione transferase 21.0 1.4E+02 0.0048 19.9 4.5 43 109-151 79-121 (139)
255 2x5d_A Probable aminotransfera 20.8 1.2E+02 0.0039 24.8 4.7 37 169-205 171-213 (412)
256 3zw5_A Glyoxalase domain-conta 20.8 2E+02 0.0068 19.4 5.7 41 109-149 101-144 (147)
257 2z61_A Probable aspartate amin 20.8 3.1E+02 0.011 21.6 8.0 32 170-205 154-191 (370)
258 1pff_A Methionine gamma-lyase; 20.6 3E+02 0.01 21.3 8.2 36 170-205 83-122 (331)
259 2l82_A Designed protein OR32; 20.6 2.1E+02 0.0072 19.5 5.4 90 87-203 20-109 (162)
260 3hsk_A Aspartate-semialdehyde 20.5 1.7E+02 0.0057 24.5 5.5 36 167-206 90-125 (381)
261 1kmj_A Selenocysteine lyase; p 20.3 1.3E+02 0.0043 24.1 4.8 48 158-205 152-202 (406)
262 3vzx_A Heptaprenylglyceryl pho 20.3 2E+02 0.0069 22.1 5.6 40 168-207 29-69 (228)
263 2dt9_A Aspartokinase; protein- 20.1 1.8E+02 0.0062 20.7 5.2 49 96-146 94-147 (167)
264 3g12_A Putative lactoylglutath 20.0 2E+02 0.0068 19.0 5.2 49 100-151 70-119 (128)
No 1
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=1.1e-31 Score=229.30 Aligned_cols=184 Identities=24% Similarity=0.329 Sum_probs=169.0
Q ss_pred CCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhh
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~r 92 (209)
+++++|+++| ++++|+++++++.|++++.+++|.+++++.++++.++.++. +....+||+++|+|++++ +
T Consensus 23 m~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~--------~~~~~~GG~~~N~A~~la-~ 92 (352)
T 4e3a_A 23 MTRFDVLTVG-NAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--------PALEASGGSAGNTAAGVA-N 92 (352)
T ss_dssp CCSEEEEEEC-CCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC--------SCEEEECCHHHHHHHHHH-H
T ss_pred CCcccEEEEC-CceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh--------hccEecCCHHHHHHHHHH-H
Confidence 5689999999 99999999999999999999999999999999999998863 568899999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCc
Q 028446 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGS 171 (209)
Q Consensus 93 lG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~ 171 (209)
||.++.++|++|+|.+|+++++.|++.||+++++.+.++ +|+.|+++++++|+|+++.++++...+++++++...++++
T Consensus 93 LG~~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~~~~~~~ 172 (352)
T 4e3a_A 93 LGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVADA 172 (352)
T ss_dssp HTCCEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHHTE
T ss_pred cCCCeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCHHHHhhC
Confidence 999999999999999999999999999999999987665 8999999999999999999999888999999988888999
Q ss_pred cEEEEe-cccC---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 172 KWLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 172 ~~v~~~-~~~~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+++|++ +.+. +.+.+.++++.|+++|++|+|||++
T Consensus 173 ~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 211 (352)
T 4e3a_A 173 KVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSD 211 (352)
T ss_dssp EEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 999999 4331 3578889999999999999999975
No 2
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.97 E-value=4e-31 Score=227.35 Aligned_cols=193 Identities=17% Similarity=0.230 Sum_probs=161.8
Q ss_pred cccccccC---CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChH
Q 028446 6 LIINREAS---QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSV 82 (209)
Q Consensus 6 ~~~~~~~~---~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~ 82 (209)
|+|+...+ ++..|++|| |+++|++++++++||+++.+++|.+++++ |++..++.++... .+....+||++
T Consensus 14 l~~~~~~~~~~~~~~v~giG-nalvDi~~~v~d~~l~~~~l~kg~m~l~~-~~~~~~~~~~~~~-----~~~~~~~GGsa 86 (372)
T 3uq6_A 14 LVPRGSHMHDLSEGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAE-EKHMTIYDEIQKK-----KKLNYIAGGAT 86 (372)
T ss_dssp ---------CCCTTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECC-GGGTTHHHHHHTS-----SSCEEEECCHH
T ss_pred cccCCccccCCCCCeEEEEC-CceeeEEEEeCHHHHHHcCCCCCceEEcC-HHHHHHHHHHhcc-----CCeEEeCCcHH
Confidence 67775544 355699999 99999999999999999999999999998 5666788777653 36788999999
Q ss_pred HHHHHHHHhhcCCC---eEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCC
Q 028446 83 TNTIRGLSVGFGVP---CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKI 158 (209)
Q Consensus 83 ~N~a~~la~rlG~~---~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l 158 (209)
+|+|++++ +||.+ +.|+|+||+|.+|+++++.|++.||+++++...+. +|+.|+++++ +|+|+++++.|++..+
T Consensus 87 ~N~a~~la-~LG~~~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l 164 (372)
T 3uq6_A 87 LNTVKMIQ-WIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDL 164 (372)
T ss_dssp HHHHHHHH-HHHCSTTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGC
T ss_pred HHHHHHHH-HcCCCCCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhc
Confidence 99999999 89865 89999999999999999999999999999887766 7999998886 8999999999999999
Q ss_pred CcccCch----hhhCCccEEEEe-cccC-CHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 159 QADELIA----EDVKGSKWLVLR-FGMF-NFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 159 ~~~~i~~----~~l~~~~~v~~~-~~~~-~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
++++++. ..+++++++|++ +.+. +.+.+.++++.|+++|++++||++..
T Consensus 165 ~~~~i~~~~~~~~i~~a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~ 219 (372)
T 3uq6_A 165 SLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAP 219 (372)
T ss_dssp CHHHHTSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCH
T ss_pred chhhhhhhhHHHHhhcccEEEEecccccccHHHHHHHHHHHHHcCCeEeeccccc
Confidence 9988863 467889999999 5442 35778899999999999999999853
No 3
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.97 E-value=1.1e-29 Score=215.93 Aligned_cols=185 Identities=18% Similarity=0.282 Sum_probs=162.0
Q ss_pred CCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhh
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~r 92 (209)
+++++|+++| ++++|+++.++++||+++++++|.+++++ +++..++.++.. +......+||+++|+|++++ +
T Consensus 5 ~~~~~v~~iG-~~~lD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~p~~~~~~~-----~~~~~~~~GG~~~N~a~~la-~ 76 (347)
T 3otx_A 5 SAPLRVYVQC-NPLLDVSAHVSDEFLVKYGLERGTAILLS-ERQKGIFDDIEK-----MPNVRYVPGGSGLNVARVAQ-W 76 (347)
T ss_dssp -CCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECC-GGGTTHHHHHHT-----STTCEEEECCHHHHHHHHHH-H
T ss_pred cCCCcEEEEC-CceeeEEEecCHHHHHHcCCCCCceEEcC-HHHHHHHHHHhc-----cCCeEEecCCHHHHHHHHHH-H
Confidence 3678999999 99999999999999999999999999998 566666666543 24789999999999999999 8
Q ss_pred c----CCC-eEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch--
Q 028446 93 F----GVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA-- 165 (209)
Q Consensus 93 l----G~~-~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~-- 165 (209)
| |.+ +.++|++|+|.+|+++++.|+++||+++++...+.+|+.|+++++ +|+|+++.+++++..+++++++.
T Consensus 77 L~~~~G~~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~~ 155 (347)
T 3otx_A 77 MQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSPA 155 (347)
T ss_dssp TTGGGTTSSEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSHH
T ss_pred hcccCCCCeEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCchh
Confidence 9 999 999999999999999999999999999998654448999999998 89999999999888899888763
Q ss_pred --hhhCCccEEEEe-ccc-CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 166 --EDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 166 --~~l~~~~~v~~~-~~~-~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.+++++++|++ +.+ .+.+.+.++++.|+++|+++++|+++
T Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~ 200 (347)
T 3otx_A 156 VVRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSA 200 (347)
T ss_dssp HHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hHHHHhhCCEEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCch
Confidence 567899999999 433 26788999999999999999999974
No 4
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.96 E-value=3.1e-29 Score=215.44 Aligned_cols=184 Identities=17% Similarity=0.245 Sum_probs=160.9
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| ++++|+++.++++||+++.+++|.+++++ ++..+...+... .......+||+++|+|++++ +|
T Consensus 23 ~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~P~~ge~~~-----~~~~~~~~GG~~~N~A~~la-~L 94 (370)
T 3vas_A 23 SEGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAE-EKHMTIYDEIQK-----KKKLNYIAGGATLNTVKMIQ-WI 94 (370)
T ss_dssp CTTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECC-GGGTHHHHHHTT-----SSSCEEEEECHHHHHHHHHH-HH
T ss_pred CCccEEEEC-CcceeEEEecCHHHHHHcCCCCCceEEcc-HHHHHHHHHHhh-----cCCeEEecCCHHHHHHHHHH-Hh
Confidence 578999999 99999999999999999999999999987 455555555332 24789999999999999999 89
Q ss_pred ---CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecC-CCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch----
Q 028446 94 ---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA---- 165 (209)
Q Consensus 94 ---G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~-~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~---- 165 (209)
|.++.|+|+||+|.+|+++++.|+++||+++++.+.+ .+|+.|+++++ +|+|+++.++|++..+++++++.
T Consensus 95 ~~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~~~ 173 (370)
T 3vas_A 95 IQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVW 173 (370)
T ss_dssp HCCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHH
T ss_pred cCCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchhhH
Confidence 9999999999999999999999999999999998744 49999999998 89999999999888899988864
Q ss_pred hhhCCccEEEEe-ccc-CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 166 EDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 166 ~~l~~~~~v~~~-~~~-~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.++++++||++ +.+ .+.+.+.++++.|+++|+++++|+++
T Consensus 174 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~ 216 (370)
T 3vas_A 174 SLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSA 216 (370)
T ss_dssp HHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHhhCCEEEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 567899999998 332 24678899999999999999999974
No 5
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=6.6e-29 Score=212.95 Aligned_cols=192 Identities=23% Similarity=0.360 Sum_probs=157.0
Q ss_pred cccccccC---CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChH
Q 028446 6 LIINREAS---QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSV 82 (209)
Q Consensus 6 ~~~~~~~~---~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~ 82 (209)
+.|+.|.| ++++|+++| ++++|+++.+++.||+++.+++|.+.+.+ +++..++.++... ......+||++
T Consensus 11 ~~~~~~~~~~~~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~p~~~e~~~~-----~~~~~~~GG~~ 83 (365)
T 3loo_A 11 LVPRGSHMESLRDGMLVGLG-NPLLDISAVVEKDLLNKYDMQPNNAILAE-EKHMPMYQELIEK-----YQAEYIAGGSV 83 (365)
T ss_dssp ----------CCTTSEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECC-GGGTHHHHHHHHH-----HCCEEEEECHH
T ss_pred cccCCCccccCCCccEEEEC-CCeEeEEEecCHHHHHHcCCCCCCceech-hHHHHHHHHHhhc-----CCeEEecCCHH
Confidence 56888875 467899999 99999999999999999999999988754 4444555443221 26789999999
Q ss_pred HHHHHHHHhhc---CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCC
Q 028446 83 TNTIRGLSVGF---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQ 159 (209)
Q Consensus 83 ~N~a~~la~rl---G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~ 159 (209)
+|+|++++ +| |.++.++|++|+|.+|+++++.|+++||+++++.+.+.+|+.|+++++ +|+|+++.++|++..++
T Consensus 84 ~N~a~~~~-~L~~lG~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~ 161 (365)
T 3loo_A 84 QNSLRVAQ-WILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT-GTQRSLCANLAAANDFT 161 (365)
T ss_dssp HHHHHHHH-HHHTCTTSEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE-TTEEEEEEECGGGGGCC
T ss_pred HHHHHHHH-HhhcCCCcEEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE-CCceEEEeccchHhhCC
Confidence 99999998 66 999999999999999999999999999999998874448999999998 89999999999988899
Q ss_pred cccCch----hhhCCccEEEEe-ccc-CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 160 ADELIA----EDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 160 ~~~i~~----~~l~~~~~v~~~-~~~-~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+++++. +.+++++++|++ +.+ .+.+.+.++++.|+++|+++++|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~ 214 (365)
T 3loo_A 162 PEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLSA 214 (365)
T ss_dssp GGGGGSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HhHcCchhhHHHHhhCCEEEEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 988863 567899999999 433 24678889999999999999999974
No 6
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.95 E-value=1.4e-26 Score=194.45 Aligned_cols=163 Identities=20% Similarity=0.299 Sum_probs=140.7
Q ss_pred CCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhh
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~r 92 (209)
++.++|+++| ++++|+++.+ +++|.+ |.... .......+||+++|+|++++ +
T Consensus 17 ~mm~~i~viG-~~~iD~~~~v-----~~~p~~-g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~ 68 (310)
T 3go6_A 17 PMAPRVCVVG-SVNMDLTFVV-----DALPRP-GETVL--------------------AASLTRTPGGKGANQAVAAA-R 68 (310)
T ss_dssp --CCEEEEEC-CCEEEEEEEC-----SSCCCT-TCCCC--------------------CSEEEEEEECHHHHHHHHHH-H
T ss_pred cccCCEEEEC-CceEEEEEec-----CCCCCC-CCeEE--------------------ecceeecCCCHHHHHHHHHH-H
Confidence 3677899999 9999999998 667754 33222 13688999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCcc
Q 028446 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 93 lG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~ 172 (209)
||.++.++|.+|+|.+|+++++.|+++||+++++...+.+|+.++++++++|+|+++.++++...++ ++ .+.+++++
T Consensus 69 LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-~~~l~~~~ 145 (310)
T 3go6_A 69 AGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-PSAVANCD 145 (310)
T ss_dssp TTCEEEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-TTTTTTCS
T ss_pred CCCCeEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-HHHhhcCC
Confidence 9999999999999999999999999999999999766569999999999899999999988876676 45 45778999
Q ss_pred EEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 173 ~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
++|+++.. +.+.+.++++.++++|++|+|||++.
T Consensus 146 ~v~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~ 179 (310)
T 3go6_A 146 VLLTQLEI-PVATALAAARAAQSADAVVMVNASPA 179 (310)
T ss_dssp EEEECSSS-CHHHHHHHHHHHHHTTCEEEEECCSS
T ss_pred EEEECCCC-CHHHHHHHHHHHHHcCCEEEEcCCcc
Confidence 99999655 77889999999999999999999865
No 7
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.95 E-value=9.4e-27 Score=194.24 Aligned_cols=163 Identities=17% Similarity=0.286 Sum_probs=143.1
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCce-ecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSI-PVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG 94 (209)
.+|+++| ++++|+++.+ +++|.+. ... . .......+||+++|+|++++ +||
T Consensus 3 ~~v~viG-~~~~D~~~~~-----~~~p~~g-~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~lG 54 (304)
T 3ry7_A 3 NKVVILG-STNVDQFLTV-----ERYAQPG-ETLHV--------------------EEAQKAFGGGKGANQAIATA-RMQ 54 (304)
T ss_dssp CEEEEEC-CCEEEEEEEC-----SSCCCTT-CCCCC--------------------SSCCEEEEECHHHHHHHHHH-HTT
T ss_pred CcEEEEc-cceeEEEEec-----cCCCCCC-Cceec--------------------ccceeecCCCHHHHHHHHHH-HCC
Confidence 5899999 9999999998 6777553 222 2 13688999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCch--hhhCCc
Q 028446 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGS 171 (209)
Q Consensus 95 ~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~--~~l~~~ 171 (209)
.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|+++.++++...+++++++. +.++++
T Consensus 55 ~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~ 134 (304)
T 3ry7_A 55 ADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINA 134 (304)
T ss_dssp CEEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTC
T ss_pred CCeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999987665 8999999999889999999999888888887753 467899
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+++|++... +.+.+.++++.++++|++|+|||++.
T Consensus 135 ~~v~~~~~~-~~~~~~~~~~~a~~~~~~v~~D~~~~ 169 (304)
T 3ry7_A 135 DFVVAQLEV-PIPAIISAFEIAKAHGVTTVLNPAPA 169 (304)
T ss_dssp SEEEEETTS-CHHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred CEEEEcCCC-CHHHHHHHHHHHHHcCCEEEEeCCcc
Confidence 999999655 77889999999999999999999875
No 8
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.95 E-value=2.6e-27 Score=197.78 Aligned_cols=165 Identities=18% Similarity=0.232 Sum_probs=142.7
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
|.++|+++| ++++|+++.+ +++|.+ |..... ......+||+++|+|++++ +|
T Consensus 1 M~~~i~viG-~~~iD~~~~~-----~~~p~~-g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~l 52 (299)
T 3ikh_A 1 MSLRVYVTG-NITVDETWSI-----PDIPKK-GASIHG--------------------VKVSQDIGGKGANQAIILS-RC 52 (299)
T ss_dssp -CCCEEEEC-CCEEEEEEEC-----SSCCCT-TCEEEC--------------------EEEEEEEECHHHHHHHHHH-HT
T ss_pred CCceEEEEC-ceEEEEEEec-----CCCCCC-CCeEEe--------------------eeeeeccCCHHHHHHHHHH-HC
Confidence 357899999 9999999998 778765 333321 2678999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCc--hhhhCCc
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI--AEDVKGS 171 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~--~~~l~~~ 171 (209)
|.++.++|.+|+|.+|+++++.|+++||+++++...+.+|+.++++++++|+|+++.+++++..+++++++ .+.++++
T Consensus 53 G~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 132 (299)
T 3ikh_A 53 GIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAG 132 (299)
T ss_dssp TCCEEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTT
T ss_pred CCCeEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccC
Confidence 99999999999999999999999999999999865444899999999989999999888887788888775 3467899
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+++|+++.+ +.+.+.++++.++++|++++|||++.
T Consensus 133 ~~v~~~g~~-~~~~~~~~~~~a~~~g~~v~~D~~~~ 167 (299)
T 3ikh_A 133 DILLQQGNF-SLDKTRALFQYARSRGMTTVFNPSPV 167 (299)
T ss_dssp CEEEECSCS-CHHHHHHHHHHHHHTTCEEEECCCSC
T ss_pred CEEEECCCC-CHHHHHHHHHHHHHcCCEEEEccccc
Confidence 999999765 77888999999999999999999875
No 9
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.95 E-value=9.9e-27 Score=194.63 Aligned_cols=164 Identities=19% Similarity=0.301 Sum_probs=141.6
Q ss_pred CceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcC
Q 028446 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG 94 (209)
..+|+++| ++++|+++.+ +++|.+. .... .......+||+++|+|++++ |||
T Consensus 4 ~~~v~viG-~~~iD~~~~~-----~~~p~~g-~~~~--------------------~~~~~~~~GG~~~N~A~~la-~lG 55 (309)
T 1rkd_A 4 AGSLVVLG-SINADHILNL-----QSFPTPG-ETVT--------------------GNHYQVAFGGKGANQAVAAG-RSG 55 (309)
T ss_dssp CCEEEEEC-CCEEEEEEEC-----SSCCCTT-CCCC--------------------CCCEEEEEECHHHHHHHHHH-HHT
T ss_pred CCeEEEEC-cceEeEEEec-----CCCCCCC-Ceee--------------------cCceeecCCCHHHHHHHHHH-hCC
Confidence 45899999 9999999998 6677543 2221 13688999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCch--hhhCCc
Q 028446 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGS 171 (209)
Q Consensus 95 ~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~--~~l~~~ 171 (209)
.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|+++.+++++..+++++++. +.++++
T Consensus 56 ~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 135 (309)
T 1rkd_A 56 ANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANA 135 (309)
T ss_dssp CEEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHC
T ss_pred CceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccC
Confidence 9999999999999999999999999999999987655 8999999999889999988888877888887753 457789
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+++|+++.. |.+.+.++++.++++|++++|||++.
T Consensus 136 ~~v~~~~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~ 170 (309)
T 1rkd_A 136 SALLMQLES-PLESVMAAAKIAHQNKTIVALNPAPA 170 (309)
T ss_dssp SEEEECSSS-CHHHHHHHHHHHHHTTCEEEECCCSC
T ss_pred CEEEEeCCC-CHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 999998655 77888899999999999999999875
No 10
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.94 E-value=2e-26 Score=194.86 Aligned_cols=173 Identities=16% Similarity=0.251 Sum_probs=141.1
Q ss_pred cccccccCC-CceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHH
Q 028446 6 LIINREASQ-AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84 (209)
Q Consensus 6 ~~~~~~~~~-~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N 84 (209)
|-|...-++ +++|+++| ++++|+++.+ +++|.+ |.... .......+||+++|
T Consensus 14 ~~~~~~~m~~~~~vlviG-~~~iD~~~~~-----~~~p~~-g~~~~--------------------~~~~~~~~GG~~~N 66 (331)
T 2fv7_A 14 LVPRGSWQEEVAAVVVVG-SCMTDLVSLT-----SRLPKT-GETIH--------------------GHKFFIGFGGKGAN 66 (331)
T ss_dssp ----------CCSEEEEC-CCEEEEEEEC-----SSCCCT-TCCCC--------------------CSEEEEEEECHHHH
T ss_pred cccCcccccccCCEEEEC-cccEEEEEec-----CCCCCC-CceEe--------------------cCceEECcCCHHHH
Confidence 344444443 36899999 9999999998 667754 32221 12578899999999
Q ss_pred HHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccC
Q 028446 85 TIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADEL 163 (209)
Q Consensus 85 ~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i 163 (209)
+|++++ |||.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|+++.+++++..++++++
T Consensus 67 vA~~la-~LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~ 145 (331)
T 2fv7_A 67 QCVQAA-RLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDL 145 (331)
T ss_dssp HHHHHH-HTTCCEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHH
T ss_pred HHHHHH-HCCCCeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHH
Confidence 999999 8999999999999999999999999999999999987655 89999999998899999988888777888877
Q ss_pred ch--hhhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 164 IA--EDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 164 ~~--~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+. +.+++++++++++.. +.+.+..+++.++++|++++|||++.
T Consensus 146 ~~~~~~l~~~~~v~~~~~~-~~~~~~~~~~~a~~~g~~v~~Dp~~~ 190 (331)
T 2fv7_A 146 RAAANVISRAKVMVCQLEI-TPATSLEALTMARRSGVKTLFNPAPA 190 (331)
T ss_dssp HHTHHHHHHCSEEEECSSS-CHHHHHHHHHHHHHTTCEEEECCCSC
T ss_pred HHHHHhhccCCEEEEecCC-CHHHHHHHHHHHHHcCCEEEEeCCcc
Confidence 53 356789999999655 77888899999999999999999865
No 11
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=5.7e-26 Score=193.26 Aligned_cols=164 Identities=21% Similarity=0.343 Sum_probs=140.7
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| ++++|+++.+ +++|.+.+ ... +..+...+||+++|+|++++ ||
T Consensus 28 ~~~~i~viG-~~~iD~~~~~-----~~~p~~~~-~~~--------------------~~~~~~~~GG~~~NvA~~la-~L 79 (343)
T 2rbc_A 28 GGKHVLCVG-AAVLDTLFRV-----ADMPKGEG-KVL--------------------PYEVLQIAEGMASSAAYAVH-RM 79 (343)
T ss_dssp CCCEEEEES-CCEEEEEEEC-----SSCCCSSS-CCC--------------------CSEEEEEEECHHHHHHHHHH-HT
T ss_pred cCCeEEEEC-cceEEEEeec-----CCCCCCCC-eEe--------------------eeeeEEcCCcHHHHHHHHHH-Hc
Confidence 356899999 9999999998 56665432 211 13678899999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCcc
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~ 172 (209)
|.++.++|++|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|+++.+++++..+++++++...+.+++
T Consensus 80 G~~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~ 159 (343)
T 2rbc_A 80 GGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFD 159 (343)
T ss_dssp TCEEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCHHHHTTCS
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcHhhhCCCC
Confidence 99999999999999999999999999999999987655 89999999998999999888887777888888766788999
Q ss_pred EEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 173 ~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+||+++.. ++.+.++++.++++|++++|||.+.
T Consensus 160 ~v~~~~~~--~~~~~~~~~~a~~~g~~v~~Dp~~~ 192 (343)
T 2rbc_A 160 AVLVDVRW--PELALDVLTVARALGKPAILDGDVA 192 (343)
T ss_dssp EEEECSSS--HHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred EEEEcCCC--HHHHHHHHHHHHHCCCEEEEECCcc
Confidence 99999543 4678889999999999999999764
No 12
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.94 E-value=4.7e-26 Score=192.93 Aligned_cols=160 Identities=22% Similarity=0.258 Sum_probs=137.7
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| .+++|++... ++.|.+ +..+...+||+++|+|++++ ||
T Consensus 3 ~~~~v~viG-~~~iD~~~~~-----~~~~~~--------------------------~~~~~~~~GG~~~NvA~~la-~L 49 (338)
T 3ljs_A 3 LKKTILCFG-EALIDMLAQP-----LVKKGM--------------------------PRAFLQCAGGAPANVAVAVA-RL 49 (338)
T ss_dssp -CCEEEEES-CCEEEEEECC-----CSSTTS--------------------------CCCEEEEEECHHHHHHHHHH-HH
T ss_pred CCCCEEEEC-hhhhheeccC-----CCCccc--------------------------hhceeecCCChHHHHHHHHH-hC
Confidence 578999999 9999999887 334432 13788999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecC--CcCCCCCcccCchhhhCC
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKG 170 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~--ga~~~l~~~~i~~~~l~~ 170 (209)
|.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|++..+. +++..+++++++...+++
T Consensus 50 G~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~ 129 (338)
T 3ljs_A 50 GGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSD 129 (338)
T ss_dssp TCCEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHT
T ss_pred CCCEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcC
Confidence 99999999999999999999999999999999988655 899999999988999987665 666678999998777889
Q ss_pred ccEEEEe-cccC---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 171 SKWLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 171 ~~~v~~~-~~~~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++++|++ +.+. +.+.+.++++.++++|++|+|||+.
T Consensus 130 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 169 (338)
T 3ljs_A 130 ALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNF 169 (338)
T ss_dssp EEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999998 4442 2567889999999999999999963
No 13
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.94 E-value=3.1e-25 Score=188.31 Aligned_cols=184 Identities=20% Similarity=0.279 Sum_probs=150.2
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| ++++|+++.++.+++.+++...|...+.+ ++......+... .......+||+++|+|++++ +|
T Consensus 5 ~~~~v~viG-~~~~D~~~~~~~~~~~~~~~~~g~~~~~~-~~~~p~~~~~~~-----~~~~~~~~GG~~~NvA~~la-~l 76 (345)
T 1bx4_A 5 RENILFGMG-NPLLDISAVVDKDFLDKYSLKPNDQILAE-DKHKELFDELVK-----KFKVEYHAGGSTQNSIKVAQ-WM 76 (345)
T ss_dssp CTTCEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECC-GGGHHHHHHHHH-----HSCCEEEEECHHHHHHHHHH-HH
T ss_pred ccccEEEEC-CcceeEEEecCHHHHHHcCCCCCcEEEch-HHHHHHHHHHhc-----cCCceecCCcHHHHHHHHHH-Hh
Confidence 567899999 99999999998878888888888766653 111222111111 13788999999999999999 89
Q ss_pred C----CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcc-cCc----
Q 028446 94 G----VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQAD-ELI---- 164 (209)
Q Consensus 94 G----~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~-~i~---- 164 (209)
| .++.|+|.+|+|.+|+++++.|+++||+++++...+.+|+.++++++ +|+|+++.+.+++..++++ +++
T Consensus 77 gg~~~~~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~~~~ 155 (345)
T 1bx4_A 77 IQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDLEKN 155 (345)
T ss_dssp HCSSTTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTSHHH
T ss_pred cCCCCCcEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc-CCceEeeeccchHhhcCcccccCcHHH
Confidence 6 99999999999999999999999999999998754458999999987 7899998888888788888 776
Q ss_pred hhhhCCccEEEEe-ccc-CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 165 AEDVKGSKWLVLR-FGM-FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 165 ~~~l~~~~~v~~~-~~~-~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+.+++++++|++ +.. .+.+.+.++++.++++|+++++|+.+
T Consensus 156 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~ 199 (345)
T 1bx4_A 156 WMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSA 199 (345)
T ss_dssp HHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHhhCCEEEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCc
Confidence 3456789999998 322 25688899999999999999999974
No 14
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.93 E-value=1e-25 Score=188.17 Aligned_cols=157 Identities=18% Similarity=0.189 Sum_probs=135.3
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~ 95 (209)
.+|+++| ++++|+++.+ +++|.+.. ... .......+||+++|+|++++ |||.
T Consensus 6 ~~i~viG-~~~iD~~~~~-----~~~p~~~~-~~~--------------------~~~~~~~~GG~~~N~A~~la-~LG~ 57 (302)
T 2c4e_A 6 EKITCVG-HTALDYIFNV-----EKFPEPNT-SIQ--------------------IPSARKYYGGAAANTAVGIK-KLGV 57 (302)
T ss_dssp EEEEEES-CCEEEEEEEC-----SSCCCTTC-CCC--------------------CSCEEEEEECHHHHHHHHHH-HTTC
T ss_pred CcEEEEC-ceeEEEEecc-----cccCCCCc-eee--------------------ecceeecCCCHHHHHHHHHH-HCCC
Confidence 4799999 9999999988 66765432 211 13688999999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCccEE
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWL 174 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~~v 174 (209)
++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|+++.+++++..+++++++. .++++|
T Consensus 58 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~v 134 (302)
T 2c4e_A 58 NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN---FNTEIV 134 (302)
T ss_dssp EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC---CCEEEE
T ss_pred ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc---ccCCEE
Confidence 999999999999999999999999999999887666 7999999998899999988888877788877764 689999
Q ss_pred EEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 175 VLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 175 ~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
|++... | +.+.++++.++++| +++|||+.
T Consensus 135 ~~~~~~-~-~~~~~~~~~a~~~g-~v~~D~~~ 163 (302)
T 2c4e_A 135 HIATGD-P-EFNLKCAKKAYGNN-LVSFDPGQ 163 (302)
T ss_dssp EECSSC-H-HHHHHHHHHHBTTB-EEEECCGG
T ss_pred EEeCCC-c-HHHHHHHHHHHhcC-CEEEeCch
Confidence 999643 4 78889999999999 99999985
No 15
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.93 E-value=1.6e-25 Score=189.02 Aligned_cols=160 Identities=19% Similarity=0.214 Sum_probs=134.1
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| ++++|++... +++|... +..+...+||+++|+|++++ +|
T Consensus 20 ~~~~v~viG-~~~~D~~~~~-----~~~p~~~-------------------------~~~~~~~~GG~~~NvA~~la-~L 67 (327)
T 3hj6_A 20 GDLDVVSLG-EILVDMISTE-----EVNSLSQ-------------------------SREYTRHFGGSPANIAVNLS-RL 67 (327)
T ss_dssp --CCEEEES-CCEEEEECCC-----CCSSGGG-------------------------CCEEEEEEECHHHHHHHHHH-HT
T ss_pred CCCCEEEEc-cceEEEeccC-----CCCCccc-------------------------cceeeeecCcHHHHHHHHHH-Hc
Confidence 568999999 9999999887 4445321 13688999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCcc
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~ 172 (209)
|.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.+++..+ +|+|+++.+++++..++++++..+.+++++
T Consensus 68 G~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 146 (327)
T 3hj6_A 68 GKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIFELIKRSK 146 (327)
T ss_dssp TCCEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHHHHHC--C
T ss_pred CCcEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCHhHhccCC
Confidence 99999999999999999999999999999999986655 8988887765 699999888888888888888777889999
Q ss_pred EEEEe-ccc-C--CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 173 WLVLR-FGM-F--NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 173 ~v~~~-~~~-~--~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++|++ +.+ . +.+.+.++++.++++|++|+|||++
T Consensus 147 ~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 184 (327)
T 3hj6_A 147 VFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCY 184 (327)
T ss_dssp EEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCC
Confidence 99999 333 1 3577889999999999999999985
No 16
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.93 E-value=1.2e-24 Score=182.60 Aligned_cols=165 Identities=19% Similarity=0.319 Sum_probs=135.6
Q ss_pred CCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhh
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~r 92 (209)
+++++|+++| ++++|+++.+ +++|.+ +..... ......+||+++|+|++++ |
T Consensus 15 ~~~~~i~viG-~~~iD~~~~~-----~~~p~~-~~~~~~--------------------~~~~~~~GG~~~NvA~~la-~ 66 (312)
T 2hlz_A 15 PRGSQILCVG-LVVLDVISLV-----DKYPKE-DSEIRC--------------------LSQRWQRGGNASNSCTILS-L 66 (312)
T ss_dssp --CCEEEEES-CCEEEEEEEE-----SSCCCT-TCEEEC--------------------SEEEEEEESHHHHHHHHHH-H
T ss_pred CCCCcEEEEC-cceEEEeecc-----ccCCCc-cceeec--------------------ccceeccCccHHHHHHHHH-H
Confidence 3567999999 9999999998 667654 322211 2567899999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecC-CCceeEEEEEc-CCCCeeEEecCCcCCCCCcccCchhhhCC
Q 028446 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (209)
Q Consensus 93 lG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~-~~T~~~~i~~~-~~G~rt~~~~~ga~~~l~~~~i~~~~l~~ 170 (209)
||.++.++|++|+|.+|+++++.|+++||+++++.+.+ .+|+.++++++ ++|+|+++.++++...+++++++...+++
T Consensus 67 LG~~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~~ 146 (312)
T 2hlz_A 67 LGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQ 146 (312)
T ss_dssp HTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTSCGGG
T ss_pred cCCceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHhhhcc
Confidence 99999999999999999999999999999999998775 48898888776 47999999888887788888776556788
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHC--------CCeEEEeCCCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQE--------GLSVSMDLASF 207 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~--------g~~v~~D~~~~ 207 (209)
+++||++.. +.+...++++.++++ ++++++|+.+.
T Consensus 147 ~~~v~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~ 189 (312)
T 2hlz_A 147 FKWIHIEGR--NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP 189 (312)
T ss_dssp EEEEEEECS--SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC
T ss_pred CCEEEEecc--CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc
Confidence 999999953 346677788888776 78999998753
No 17
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.92 E-value=1.4e-24 Score=182.12 Aligned_cols=159 Identities=21% Similarity=0.276 Sum_probs=134.2
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
+-.+|+++| ++++|+++.+ +++|.+ |..... ..+...+||+++|+|++++ ||
T Consensus 13 ~~~~v~vvG-~~~iD~~~~~-----~~~p~~-g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~L 64 (311)
T 1vm7_A 13 MFLVISVVG-SSNIDIVLKV-----DHFTKP-GETQKA--------------------IEMNVFPGGKGANQAVTVA-KI 64 (311)
T ss_dssp CCCCEEEEC-CCEEEEEEEC-----SSCCCT-TCEEEC--------------------SEEEEEEECHHHHHHHHHH-HH
T ss_pred ccCCEEEEC-cceeeEEEec-----ccCCCC-CceEec--------------------CeeeecCCCHHHHHHHHHH-Hc
Confidence 567899999 9999999998 778765 433221 3688899999999999999 89
Q ss_pred CCC-eEEEEEecCChhHHHHHHHHHhCCCcccceeecC-CCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCc
Q 028446 94 GVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGS 171 (209)
Q Consensus 94 G~~-~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~-~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~ 171 (209)
|.+ +.++|++|+|.+|+++++.|++.|| ++.+.+ .+|+.++++++++|+|+++.+++++..+++++++.+.++++
T Consensus 65 G~~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~~~ 141 (311)
T 1vm7_A 65 GEKGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSES 141 (311)
T ss_dssp HSSCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTTC
T ss_pred CCCceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhChhhcccC
Confidence 999 9999999999999999999999999 666644 48999999999889999998888877899888876678899
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+++|+++.. |.+.+.++ ++++|++++|||++.
T Consensus 142 ~~v~~~~~~-~~~~~~~~---a~~~~~~v~~Dp~~~ 173 (311)
T 1vm7_A 142 DILLLQNEI-PFETTLEC---AKRFNGIVIFDPAPA 173 (311)
T ss_dssp SEEEECSSS-CHHHHHHH---HHHCCSEEEECCCSC
T ss_pred CEEEEeCCC-CHHHHHHH---HHHcCCEEEEeCcch
Confidence 999998654 65544433 788999999999863
No 18
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.92 E-value=4e-24 Score=184.19 Aligned_cols=183 Identities=20% Similarity=0.276 Sum_probs=145.7
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| ++++|+++.++..++++++...|.....+ ++...++.++. +......+||+++|+|++++ +|
T Consensus 31 ~~~~vlviG-~~~lD~~~~~~~~~~~~~~~~~g~~~~~~-~~~~p~~~~~~------~~~~~~~~GG~~~NvA~~la-~L 101 (383)
T 2abs_A 31 GPMRVFAIG-NPILDLVAEVPSSFLDEFFLKRGDATLAT-PEQMRIYSTLD------QFNPTSLPGGSALNSVRVVQ-KL 101 (383)
T ss_dssp CCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECC-GGGGGGGGTGG------GGCCEEEEESHHHHHHHHHH-HH
T ss_pred CCceEEEEC-cchheeEeccCHHHHHhcCCCCCceeech-hhHHHHHHhhc------cccceeeCCChHHHHHHHHH-Hh
Confidence 467999999 99999999987667777766666654322 11111111110 13678899999999999999 89
Q ss_pred ---CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCC
Q 028446 94 ---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (209)
Q Consensus 94 ---G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~ 170 (209)
|.++.|+|.||+|.+|+++++.|+++||+++++...+.+|+.++++++ +|+|+++.+.+++..+++++...+.+++
T Consensus 102 g~~g~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~~~~~~~l~~ 180 (383)
T 2abs_A 102 LRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWTTFASG 180 (383)
T ss_dssp HCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHHHHTTT
T ss_pred ccCCCcEEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc-CCceeEeeccChhhhCChhhhhHHHhhc
Confidence 899999999999999999999999999999998754448999999997 7999998888887778777544567889
Q ss_pred ccEEEEe-ccc-CCHHHHHHHHHHHHH-CCCeEEEeCCC
Q 028446 171 SKWLVLR-FGM-FNFEVIQAAIRIAKQ-EGLSVSMDLAS 206 (209)
Q Consensus 171 ~~~v~~~-~~~-~~~~~~~~l~~~a~~-~g~~v~~D~~~ 206 (209)
+++||++ +.. .+.+.+.++++.+++ +|+++++|+.+
T Consensus 181 ~~~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~ 219 (383)
T 2abs_A 181 ALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSA 219 (383)
T ss_dssp CCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCC
T ss_pred CCEEEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCc
Confidence 9999998 332 256888999999999 99999999974
No 19
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.92 E-value=1.2e-24 Score=183.63 Aligned_cols=162 Identities=17% Similarity=0.251 Sum_probs=136.1
Q ss_pred CCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhh
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~r 92 (209)
+++++|+++| ++++|+++.+ +..|.+ |.... ......+||+++|+|++|+ +
T Consensus 4 ~~~~~v~viG-~~~vD~~~~~-----~~~~~~-g~~~~---------------------~~~~~~~GG~~~NvA~~la-~ 54 (328)
T 3kzh_A 4 RKEPYLLVFG-ASVVDVFGFS-----KASYRP-YNSTP---------------------GHVKISFGGVCRNIAENMA-R 54 (328)
T ss_dssp CCCCCEEEEC-CCEEEEEEEE-----SSCCCT-TSEEE---------------------EEEEEEEECHHHHHHHHHH-H
T ss_pred CCCCcEEEEC-cEEeeeeecc-----CCCCCC-CCCce---------------------EEEEEccCcHHHHHHHHHH-H
Confidence 3578999999 9999999998 556654 33222 2578999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEE-ecCCcCCCCCcccCc--hhhh
Q 028446 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMR-PCLSNAVKIQADELI--AEDV 168 (209)
Q Consensus 93 lG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~-~~~ga~~~l~~~~i~--~~~l 168 (209)
||.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|++. .++++...+++++++ .+.+
T Consensus 55 LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (328)
T 3kzh_A 55 VGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIF 134 (328)
T ss_dssp TTCCEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHH
T ss_pred cCCCcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999887766 899999999999999884 456766667776664 3567
Q ss_pred CCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 169 KGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 169 ~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
..+++++++..+ | +.+..+++ +++.|++|+|||++
T Consensus 135 ~~~~~~~~~~~~-~-~~~~~l~~-a~~~~~~v~~D~~~ 169 (328)
T 3kzh_A 135 ENAEYTVLDSDN-P-EIMEYLLK-NFKDKTNFILDPVS 169 (328)
T ss_dssp HTCSEEEEESSC-H-HHHHHHHH-HHTTTSEEEEECCS
T ss_pred ccCCEEEEeCCc-H-HHHHHHHH-HhhcCCcEEEEeCC
Confidence 899999999765 5 66777777 88999999999975
No 20
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=2.9e-24 Score=180.51 Aligned_cols=161 Identities=21% Similarity=0.232 Sum_probs=132.5
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~ 95 (209)
.+|+++| ++++|+++.+ ++.|.+ +.... ..+...+||+++|+|++++ |||.
T Consensus 4 ~~i~viG-~~~~D~~~~~-----~~~~~~-~~~~~---------------------~~~~~~~GG~~~NvA~~la-~LG~ 54 (317)
T 2nwh_A 4 KKILVLG-GAHIDRRGMI-----ETETAP-GASNP---------------------GSWMEEAGGGGFNAARNLS-RLGF 54 (317)
T ss_dssp CEEEEES-CCEEEEEEEE-----SSSCCT-TSCCC---------------------EEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CeEEEEC-chheEEeecc-----CCCCCC-CCCce---------------------EeEEEeCCcHHHHHHHHHH-hcCC
Confidence 4799999 9999999988 444443 32211 2478899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC-CcCCCCCcccCch----hhhCC
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL-SNAVKIQADELIA----EDVKG 170 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~-ga~~~l~~~~i~~----~~l~~ 170 (209)
++.++|.+|+|.+|+++++.|+++||+++++...+.+|+.++++++++|+|+++.+. +++..+++++++. +.+..
T Consensus 55 ~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (317)
T 2nwh_A 55 EVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIA 134 (317)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHH
T ss_pred CcEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhcc
Confidence 999999999999999999999999999999444334899999999989999886655 4445677776542 45788
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++++|++..+ +.+.+.++++.++++|++|+|||++
T Consensus 135 ~~~v~~~~~~-~~~~~~~~~~~a~~~g~~v~~Dp~~ 169 (317)
T 2nwh_A 135 SDFLLCDANL-PEDTLTALGLIARACEKPLAAIAIS 169 (317)
T ss_dssp CSEEEEETTS-CHHHHHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHHhcCCeEEEeCCC
Confidence 9999999655 7788899999999999999999975
No 21
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.92 E-value=5e-24 Score=179.64 Aligned_cols=162 Identities=20% Similarity=0.213 Sum_probs=131.0
Q ss_pred CCCceEEEecCceeEEEEeecChhHH---HhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHH
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLL---DQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGL 89 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l---~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l 89 (209)
+++++|+++| .+++|++.......+ +.+|. ......+||+++|+|+++
T Consensus 3 m~~~~v~~iG-~~~~D~~~~~~~~~~~~~~~~p~----------------------------~~~~~~~GG~~~NvA~~l 53 (325)
T 3h49_A 3 LDNLDVICIG-AAIVDIPLQPVSKNIFDVDSYPL----------------------------ERIAMTTGGDAINEATII 53 (325)
T ss_dssp --CEEEEEES-CCEEEEEECSCCGGGGGSSCCCC----------------------------SCCCCEEESHHHHHHHHH
T ss_pred CCCCeEEEEC-hhhheeeccCCCCccccccccch----------------------------heeEEccCcHHHHHHHHH
Confidence 4678999999 999999865422111 12221 257889999999999999
Q ss_pred HhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCc-CCCCCcccCchhh
Q 028446 90 SVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSN-AVKIQADELIAED 167 (209)
Q Consensus 90 a~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga-~~~l~~~~i~~~~ 167 (209)
+ +||.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|+++.+++. ...+++++++...
T Consensus 54 a-~LG~~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~ 132 (325)
T 3h49_A 54 S-RLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFAR 132 (325)
T ss_dssp H-HTTCEEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCGGG
T ss_pred H-HCCCCeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcChhh
Confidence 9 8999999999999999999999999999999999987665 89999999999999999887754 3567888887777
Q ss_pred hCCccEEEEeccc-C---CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 168 VKGSKWLVLRFGM-F---NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 168 l~~~~~v~~~~~~-~---~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.+++++|+++.+ . +.+.+.++++.|+++| .++||++
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~ 173 (325)
T 3h49_A 133 FSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-MIICADM 173 (325)
T ss_dssp GGGCSEEEEEEETTSTTSCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred hccCCEEEEecccCCcccCHHHHHHHHHHHHhcC-CEEEecC
Confidence 8899999999422 1 3567889999999999 5666643
No 22
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.91 E-value=4.6e-24 Score=179.36 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=124.2
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
|.++|+++| ++++|++... ..+...+||+++|+|++++ ||
T Consensus 3 m~~~i~viG-~~~~D~~~~~--------------------------------------~~~~~~~GG~~~NvA~~la-~L 42 (319)
T 3lhx_A 3 LSKKIAVIG-ECMIELSEKG--------------------------------------ADVKRGFGGDTLNTSVYIA-RQ 42 (319)
T ss_dssp -CEEEEEES-CCEEEEEC-----------------------------------------CCEEEEECHHHHHHHHHH-TT
T ss_pred ccCceeeec-hhhhhhccCC--------------------------------------CceEEecCChHHHHHHHHH-Hc
Confidence 456899999 9999987542 1577899999999999999 89
Q ss_pred C----CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcC---CCCCcccCc-
Q 028446 94 G----VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNA---VKIQADELI- 164 (209)
Q Consensus 94 G----~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~---~~l~~~~i~- 164 (209)
| .++.++|++|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+|+++.+++.. ..+++++++
T Consensus 43 G~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~ 122 (319)
T 3lhx_A 43 VDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAA 122 (319)
T ss_dssp SCTTTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHH
T ss_pred CCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhh
Confidence 9 8999999999999999999999999999999988766 899999999889999999887642 346665554
Q ss_pred -hhhhCCccEEEEe-ccc--C---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 165 -AEDVKGSKWLVLR-FGM--F---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 165 -~~~l~~~~~v~~~-~~~--~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+.++++++||++ +.+ . +.+.+.++++.++++|++|+|||+.
T Consensus 123 ~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 171 (319)
T 3lhx_A 123 ICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNY 171 (319)
T ss_dssp HHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcC
Confidence 3568899999999 322 1 2367889999999999999999975
No 23
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.91 E-value=9.3e-24 Score=178.95 Aligned_cols=159 Identities=19% Similarity=0.180 Sum_probs=131.2
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| .+++|++...+ |.... ...+...+||+++|+|++++ +|
T Consensus 25 ~~~~vlviG-~~~iD~~~~~~-----------g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~L 71 (336)
T 4du5_A 25 SALDVITFG-EAMMLLVADRP-----------GPLEH--------------------AEAFHKRTAGAETNVAIGLA-RL 71 (336)
T ss_dssp -CEEEEEEC-CCEEEEEESSS-----------SCGGG--------------------CCEEEEEEECHHHHHHHHHH-HT
T ss_pred CCCCEEEEC-hhhhhccCCCC-----------Cccch--------------------hhheeecCCCHHHHHHHHHH-hC
Confidence 468999999 99999987641 21111 13688999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEE-ec--CCcCCCCCcccCchhhhC
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMR-PC--LSNAVKIQADELIAEDVK 169 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~-~~--~ga~~~l~~~~i~~~~l~ 169 (209)
|.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.+++.++++|+++++ .+ .++...+++++++...++
T Consensus 72 G~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~ 151 (336)
T 4du5_A 72 GLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLL 151 (336)
T ss_dssp TCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHT
T ss_pred CCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhc
Confidence 99999999999999999999999999999999988766 899999999888966544 33 467778999999877889
Q ss_pred CccEEEEec-cc--C--CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLRF-GM--F--NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~-~~--~--~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+++++|+++ .. . +.+.+.++++.++++|++|+|||+
T Consensus 152 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 192 (336)
T 4du5_A 152 SARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPN 192 (336)
T ss_dssp TEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCc
Confidence 999999883 22 1 246778899999999999999997
No 24
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.91 E-value=2.8e-23 Score=176.27 Aligned_cols=158 Identities=11% Similarity=-0.003 Sum_probs=129.5
Q ss_pred CceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcC
Q 028446 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG 94 (209)
..+|+++| ++++|++..- + +... ....+...+||+++|+|++++ |||
T Consensus 2 ~~~v~viG-~~~~D~~~~~--------~---~~~~--------------------~~~~~~~~~GG~~~NvA~~la-~LG 48 (346)
T 3ktn_A 2 SLKIAAFG-EVMLRFTPPE--------Y---LMLE--------------------QTEQLRMNFVGTGVNLLANLA-HFQ 48 (346)
T ss_dssp CCEEEEEC-CCEEEEECST--------T---CCTT--------------------TCSCCEEEEECHHHHHHHHHH-HTT
T ss_pred CCcEEEeC-hhhhhhcCCC--------C---Cccc--------------------ccceeEEeccCHHHHHHHHHH-HcC
Confidence 36899999 9999988522 0 1110 024789999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEec----CCcCCCCCcccCc-hhhhC
Q 028446 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC----LSNAVKIQADELI-AEDVK 169 (209)
Q Consensus 95 ~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~----~ga~~~l~~~~i~-~~~l~ 169 (209)
.++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.+++.++++++++++.| .++...+++++++ ...++
T Consensus 49 ~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (346)
T 3ktn_A 49 LETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLA 128 (346)
T ss_dssp CEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHT
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhC
Confidence 999999999999999999999999999999998765589999998876666677776 3456678888887 45789
Q ss_pred CccEEEEeccc---CC--HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLRFGM---FN--FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~~~---~~--~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++||+++.. .+ .+.+.++++.++++|++|+|||+
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 169 (346)
T 3ktn_A 129 EVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFN 169 (346)
T ss_dssp TCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 99999998322 11 36788999999999999999997
No 25
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.91 E-value=2.7e-23 Score=175.36 Aligned_cols=161 Identities=26% Similarity=0.344 Sum_probs=132.7
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
++++|+++| ++++|++... ...|... ...+...+||+++|+|++++ ||
T Consensus 10 ~~~~i~viG-~~~~D~~~~~-----~~~~~~~-------------------------~~~~~~~~GG~~~NvA~~la-~L 57 (332)
T 2qcv_A 10 REFDLIAIG-RACIDLNAVE-----YNRPMEE-------------------------TMTFSKYVGGSPANIVIGSS-KL 57 (332)
T ss_dssp CSEEEEEES-CCEEEEEESS-----CSSCGGG-------------------------CCCEEEEEESHHHHHHHHHH-HT
T ss_pred cCCcEEEEC-cceEEEecCC-----CCCCccc-------------------------cceeEecCCCHHHHHHHHHH-Hc
Confidence 567999999 9999999875 2222110 13688999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecC-C-CceeEEEEEcCCCCeeEEecCC--cCCCCCcccCchhhhC
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-G-PTGQCVCLVDASGNRTMRPCLS--NAVKIQADELIAEDVK 169 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~-~-~T~~~~i~~~~~G~rt~~~~~g--a~~~l~~~~i~~~~l~ 169 (209)
|.++.++|.+|+|.+|+++++.|+++||+++++.+.+ . +|+.+++.++.+|+++++.++. +...+++++++...++
T Consensus 58 G~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~ 137 (332)
T 2qcv_A 58 GLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIR 137 (332)
T ss_dssp TCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHT
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHc
Confidence 9999999999999999999999999999999998764 3 7999998877678887766553 4557888888776788
Q ss_pred CccEEEEeccc---C-CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 170 GSKWLVLRFGM---F-NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~---~-~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++++||+++.+ . +.+.+.++++.++++|++++|||+.
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 178 (332)
T 2qcv_A 138 RSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDY 178 (332)
T ss_dssp TEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcC
Confidence 99999998432 1 2467888999999999999999985
No 26
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.91 E-value=1.7e-23 Score=175.48 Aligned_cols=156 Identities=18% Similarity=0.238 Sum_probs=130.5
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~ 95 (209)
++|+++| ++++|++...+ |.... ...+...+||+++|+|++++ +||.
T Consensus 2 ~~v~viG-~~~iD~~~~~~-----------g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~ 48 (313)
T 3ewm_A 2 SLIASIG-ELLIDLISVEE-----------GDLKD--------------------VRLFEKHPGGAPANVAVGVS-RLGV 48 (313)
T ss_dssp CEEEEES-CCEEEEEESSS-----------SCTTT--------------------CCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CcEEEEC-ceeeeeecCCC-----------CCccc--------------------ccceeecCCCHHHHHHHHHH-HCCC
Confidence 4799999 99999987641 11110 13688999999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCc-CCCCCcccCchhhhCCccE
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSN-AVKIQADELIAEDVKGSKW 173 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga-~~~l~~~~i~~~~l~~~~~ 173 (209)
++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.+++.++. |+|+++.+.+. ...+++++++...++++++
T Consensus 49 ~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~ 127 (313)
T 3ewm_A 49 KSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINWDIVEEAKI 127 (313)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCHHHHHHCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCHHHhCCCCE
Confidence 999999999999999999999999999999986655 89999998875 99999888774 4678998888777889999
Q ss_pred EEEec-ccC---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 174 LVLRF-GMF---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 174 v~~~~-~~~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+|+++ .+. +.+.+.++++.++ .+++|+|||+.
T Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~ 163 (313)
T 3ewm_A 128 VNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNL 163 (313)
T ss_dssp EEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCC
T ss_pred EEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCC
Confidence 99994 331 3577888999888 57999999975
No 27
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.91 E-value=5.3e-23 Score=173.72 Aligned_cols=162 Identities=19% Similarity=0.253 Sum_probs=127.7
Q ss_pred CceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcC
Q 028446 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG 94 (209)
..+|+++| ++++|++...+. + +.... .......+||+++|+|++++ +||
T Consensus 3 m~~i~viG-~~~~D~~~~~~~--------~-~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG 51 (330)
T 3iq0_A 3 LSKVFTIG-EILVEIMASKIG--------Q-PFDQP--------------------GIWNGPYPSGAPAIFIDQVT-RLG 51 (330)
T ss_dssp -CEEEEES-CCEEEEEEEEET--------C-CSSSC--------------------EEEEEEEEECHHHHHHHHHH-HTT
T ss_pred CCCEEEEc-ceeEEEeccCCC--------C-Ccccc--------------------ccccCcCCCCHHHHHHHHHH-HCC
Confidence 45899999 999999986411 1 10000 00245789999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEe-cC-CcCCCCCcccCchhhhCCc
Q 028446 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRP-CL-SNAVKIQADELIAEDVKGS 171 (209)
Q Consensus 95 ~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~-~~-ga~~~l~~~~i~~~~l~~~ 171 (209)
.++.++|.+|+|.+|+++++.|++.||+++++.+.++ +|+.++++++++|+|++.+ .. ++...++++++....++++
T Consensus 52 ~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 131 (330)
T 3iq0_A 52 VPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDC 131 (330)
T ss_dssp CCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTE
T ss_pred CcEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccC
Confidence 9999999999999999999999999999999987665 8999999999899996544 33 4556788888887788999
Q ss_pred cEEEEec-cc-C--CHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 172 KWLVLRF-GM-F--NFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 172 ~~v~~~~-~~-~--~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
++||+++ .. . +.+.+.++++.++++|++++|||+..
T Consensus 132 ~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 171 (330)
T 3iq0_A 132 THFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIR 171 (330)
T ss_dssp EEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred CEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCC
Confidence 9999993 32 1 24667889999999999999999853
No 28
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.91 E-value=3.8e-23 Score=172.89 Aligned_cols=158 Identities=21% Similarity=0.286 Sum_probs=130.8
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~ 95 (209)
++|+++| ++++|++...+ +.... +..+...+||+++|+|++++ |||.
T Consensus 2 ~~i~viG-~~~~D~~~~~~-----------~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~ 48 (309)
T 1v1a_A 2 LEVVTAG-EPLVALVPQEP-----------GHLRG--------------------KRLLEVYVGGAEVNVAVALA-RLGV 48 (309)
T ss_dssp CSEEEES-CCEEEEECSSS-----------SCGGG--------------------CCEEEEEEECHHHHHHHHHH-HHTC
T ss_pred CcEEEEc-cceEEEecCCC-----------Ccccc--------------------hheeeeecCcHHHHHHHHHH-HcCC
Confidence 4799999 99999985321 11110 13678899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC--CcCCCCCcccCchhhhCCccE
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSKW 173 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~--ga~~~l~~~~i~~~~l~~~~~ 173 (209)
++.++|.+|+|.+|+++++.|+++||+++++.+.+++|+.+++.++++|+|+++.+. ++...+++++++...++++++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 128 (309)
T 1v1a_A 49 KVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRF 128 (309)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCE
Confidence 999999999999999999999999999999987645999999999888999887654 556678888887777889999
Q ss_pred EEEe-cccC----CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 174 LVLR-FGMF----NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 174 v~~~-~~~~----~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
||++ +... +.+.+.++++.++++|++++|||+.
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 166 (309)
T 1v1a_A 129 LHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNY 166 (309)
T ss_dssp EEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred EEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 9999 3321 2466788999999999999999986
No 29
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.91 E-value=9e-24 Score=178.89 Aligned_cols=164 Identities=15% Similarity=0.176 Sum_probs=133.0
Q ss_pred ceEEEecCceeEEEEeecChhHHHh-----CCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHH
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQ-----IPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLS 90 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~-----~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la 90 (209)
++|+++| ++++|+++.++++|++. +|.. +.... ...+...+||+++|+|++++
T Consensus 11 m~i~v~G-~~~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------------~~~~~~~~GG~~~NvA~~la 68 (334)
T 2pkf_A 11 MTIAVTG-SIATDHLMRFPGRFSEQLLPEHLHKV-SLSFL--------------------VDDLVMHRGGVAGNMAFAIG 68 (334)
T ss_dssp SEEEEES-CCEEEEEEECSSCTHHHHTTSCGGGC-CCCCC--------------------CSEEEEEEECHHHHHHHHHH
T ss_pred CeEEEEC-ChhheEEEecChHHhhhhchhhcccc-ccccc--------------------cccceecCCChHHHHHHHHH
Confidence 5899999 99999999874433332 2221 11100 13578899999999999999
Q ss_pred hhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCchh--h
Q 028446 91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE--D 167 (209)
Q Consensus 91 ~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~--~ 167 (209)
|||.++.++|.+|+| +|+ +++.|+++||+++++.+.++ +|+.++++++++|+|++..++|+...+++++++.. .
T Consensus 69 -~LG~~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~ 145 (334)
T 2pkf_A 69 -VLGGEVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSA 145 (334)
T ss_dssp -HTTCEEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHH
T ss_pred -HcCCCeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhh
Confidence 899999999999999 999 99999999999999987655 89999999998899988777887667777776532 3
Q ss_pred hCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 168 VKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 168 l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+++++++|++.. .++.+.++++.++++|++++|||+.
T Consensus 146 l~~~~~v~~~~~--~~~~~~~~~~~a~~~g~~v~~D~~~ 182 (334)
T 2pkf_A 146 IGKPELVIIGAN--DPEAMFLHTEECRKLGLAFAADPSQ 182 (334)
T ss_dssp HCSCSEEEEESC--CHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred hcCCCEEEEcCC--ChHHHHHHHHHHHhcCCeEEEeccc
Confidence 589999999954 3567888999999999999999975
No 30
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.91 E-value=1.1e-23 Score=177.80 Aligned_cols=161 Identities=14% Similarity=0.153 Sum_probs=130.8
Q ss_pred eEEEecCceeEEEEeecChhHHHh-----CCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHh
Q 028446 17 LILGLQPAALIDHVARVDWSLLDQ-----IPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV 91 (209)
Q Consensus 17 ~v~~iG~~~~vD~~~~~~~~~l~~-----~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~ 91 (209)
+|+++| ++++|+++.+++++++. +|.. +.... ...+...+||+++|+|++++
T Consensus 2 ~i~v~G-~~~iD~~~~~~~~~~~~~~~~~~p~~-~~~~~--------------------~~~~~~~~GG~~~NvA~~la- 58 (326)
T 3b1n_A 2 ATLICG-SIAYDNIMTFEGRFREHILPDQVHLI-NLSFL--------------------VPTMRREFGGCAGNIAYALN- 58 (326)
T ss_dssp CEEEES-CCEEEEEEECSSCGGGGCCTTSSSSC-EEEEE--------------------CCSCCCEEECHHHHHHHHHH-
T ss_pred cEEEEC-cceEEEEEecchhhhhhccccccCCC-Cccee--------------------cccceeccCCHHHHHHHHHH-
Confidence 699999 99999999885444433 3322 11111 12577889999999999999
Q ss_pred hcCCCeEEEEEecC-ChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhC
Q 028446 92 GFGVPCGLIGAYGD-DQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVK 169 (209)
Q Consensus 92 rlG~~~~~ig~vG~-D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~ 169 (209)
|||.++.++|.+|+ | +|+ +++.|+++||+++++.+.++ +|+.++++++++|+|++..++++...+++++++.. +
T Consensus 59 ~LG~~~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~--~ 134 (326)
T 3b1n_A 59 LLGGDARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEA--K 134 (326)
T ss_dssp HTTCCEEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGC--C
T ss_pred HcCCCeeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhcccc--c
Confidence 89999999999999 9 899 99999999999999987655 89999999998899988777887666766666532 7
Q ss_pred CccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+++++|++.. ..+.+.++++.++++|++|+|||++
T Consensus 135 ~~~~v~~~~~--~~~~~~~~~~~a~~~g~~v~~D~~~ 169 (326)
T 3b1n_A 135 DIKLAIVGPD--GFQGMVQHTEELAQAGVPFIFDPGQ 169 (326)
T ss_dssp SCSEEEECSC--CHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred CCCEEEECCc--cHHHHHHHHHHHHHCCCEEEEeCch
Confidence 8999999853 3567888999999999999999975
No 31
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.90 E-value=1.9e-23 Score=175.34 Aligned_cols=160 Identities=14% Similarity=0.181 Sum_probs=130.2
Q ss_pred CCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhh
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~r 92 (209)
+++++|+++| ++++|++... +..|... ...+...+||+++|+|++++ +
T Consensus 6 ~~~~~v~~iG-~~~~D~~~~~-----~~~p~~~-------------------------~~~~~~~~GG~~~NvA~~la-~ 53 (319)
T 3pl2_A 6 TSTHEVLAIG-RLGVDIYPLQ-----SGVGLAD-------------------------VQSFGKYLGGSAANVSVAAA-R 53 (319)
T ss_dssp -CCCSEEEES-CCEEEECBSS-----SSCCGGG-------------------------CCCBCCEEECHHHHHHHHHH-H
T ss_pred ccCCCEEEEC-hhheeeeccc-----CCCCccc-------------------------cceeeecCCCcHHHHHHHHH-H
Confidence 3678999999 9999998766 3344321 13678999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCC--c-CCCCCcccCchhhh
Q 028446 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLS--N-AVKIQADELIAEDV 168 (209)
Q Consensus 93 lG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~g--a-~~~l~~~~i~~~~l 168 (209)
||.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.+++.++++|+|+++.+.+ + ...+++++++...+
T Consensus 54 LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~ 133 (319)
T 3pl2_A 54 HGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDV 133 (319)
T ss_dssp TTCCEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHH
T ss_pred CCCceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHh
Confidence 999999999999999999999999999999999987665 8999999888889998877643 4 45788888887788
Q ss_pred CCccEEEEe-ccc--CC-HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FGM--FN-FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~~--~~-~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++|++ +.+ .+ .+....+++.+++ +.+++|||+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~ 173 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLD 173 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECC
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCC
Confidence 899999999 333 12 3455666666655 678899996
No 32
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.90 E-value=1.4e-23 Score=175.84 Aligned_cols=156 Identities=15% Similarity=0.187 Sum_probs=125.7
Q ss_pred cccccCCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHH
Q 028446 8 INREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIR 87 (209)
Q Consensus 8 ~~~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~ 87 (209)
-|-+.+++.+|+++| ++++|+++.+ +++| + |..... ......+||+++|+|+
T Consensus 13 ~~~~~~~~~~v~viG-~~~iD~~~~~-----~~~p-~-g~~~~~--------------------~~~~~~~GG~~~NvA~ 64 (306)
T 3bf5_A 13 ENLYFQGMRFLAYFG-HLNIDVLISV-----DSIP-R-EGSVNV--------------------KDLRPRFGGTAGNFAI 64 (306)
T ss_dssp ------CCEEEEEEC-CCEEEEEEEC-----SCCC-S-SEEEEC--------------------SEEEEEEEHHHHHHHH
T ss_pred cceeccCCCcEEEEC-CceEEEEEec-----CCCC-C-CceEEC--------------------cceEecCCChHHHHHH
Confidence 344556788999999 9999999998 6677 3 443322 2578899999999999
Q ss_pred HHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCchh
Q 028446 88 GLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE 166 (209)
Q Consensus 88 ~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~ 166 (209)
+++ +||.++.++|.+|+| +|+++++.|++.||+++++.+.++ +|+.+++++++ |+|+++.++++...++ ++++
T Consensus 65 ~la-~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~-- 138 (306)
T 3bf5_A 65 VAQ-KFRIPFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA-- 138 (306)
T ss_dssp HHH-HTTCCCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC--
T ss_pred HHH-HcCCCeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc--
Confidence 999 899999999999999 999999999999999999876655 79999999987 9999998888766666 5553
Q ss_pred hhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 167 ~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+++++||+++.. .+.++++.+++ +|+|||++
T Consensus 139 --~~~~~v~~~~~~----~~~~~~~~a~~---~v~~D~~~ 169 (306)
T 3bf5_A 139 --DEYEYVHFSTGP----NYLDMAKSIRS---KIIFDPSQ 169 (306)
T ss_dssp --SCEEEEEECSSS----SHHHHHHHCCS---EEEECCGG
T ss_pred --CCCCEEEECChH----HHHHHHHHhCC---cEEEcCch
Confidence 689999999532 45667777664 99999985
No 33
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.90 E-value=3.7e-23 Score=174.77 Aligned_cols=155 Identities=16% Similarity=0.207 Sum_probs=129.3
Q ss_pred CCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhh
Q 028446 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~r 92 (209)
++.++|+++| ++++|++... +. ..+...+||+++|+|++++ |
T Consensus 21 ~~m~~i~viG-~~~iD~~~~~------------~~------------------------~~~~~~~GG~~~NvA~~la-~ 62 (328)
T 4e69_A 21 QSMMHILSIG-ECMAELAPAD------------LP------------------------GTYRLGFAGDTFNTAWYLA-R 62 (328)
T ss_dssp BSSCEEEEES-CCEEEEEECS------------ST------------------------TEEEEEEECHHHHHHHHHH-H
T ss_pred ccCCcEEEec-CcEEEEecCC------------CC------------------------CceEEecCCHHHHHHHHHH-h
Confidence 4557899999 9999998752 10 1578999999999999999 8
Q ss_pred c--CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCC---CCCcccCchh
Q 028446 93 F--GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAV---KIQADELIAE 166 (209)
Q Consensus 93 l--G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~---~l~~~~i~~~ 166 (209)
| |.++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++ +|+|+++.+++... .+++.++...
T Consensus 63 Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~ 141 (328)
T 4e69_A 63 LRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAA 141 (328)
T ss_dssp HCTTSEEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHH
T ss_pred cCCCCcEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchH
Confidence 9 89999999999999999999999999999999988766 8999999999 89999988877532 2444444456
Q ss_pred hhCCccEEEEe-ccc--C---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 167 DVKGSKWLVLR-FGM--F---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 167 ~l~~~~~v~~~-~~~--~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.++++++||++ +.+ . +.+.+.++++.++++|++|+|||+.
T Consensus 142 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 187 (328)
T 4e69_A 142 AMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNL 187 (328)
T ss_dssp HHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 78999999999 322 1 2467788999999999999999963
No 34
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.90 E-value=4.8e-23 Score=174.82 Aligned_cols=150 Identities=21% Similarity=0.356 Sum_probs=119.8
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~ 95 (209)
.+|+++| ++++|++... . ..+...+||+++|+|++++ |||.
T Consensus 25 ~~ilviG-~~~~D~~~~~------------~-------------------------~~~~~~~GG~~~NvA~~la-~LG~ 65 (339)
T 1tyy_A 25 NKVWVIG-DASVDLVPEK------------Q-------------------------NSYLKCPGGASANVGVCVA-RLGG 65 (339)
T ss_dssp CCEEEES-CCEEEEEECS------------S-------------------------SEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CCEEEEC-cceeEEeccC------------C-------------------------CceEEcCCCHHHHHHHHHH-HcCC
Confidence 3799999 9999998753 0 1567899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecC--CcCCCCCcccCchhhhCCcc
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~--ga~~~l~~~~i~~~~l~~~~ 172 (209)
++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.+++.++++|+|++..+. +++..+++++ ...+++++
T Consensus 66 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~--~~~l~~~~ 143 (339)
T 1tyy_A 66 ECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQD--LPPFRQYE 143 (339)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGG--CCCCCTTC
T ss_pred CeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcch--hhHhccCC
Confidence 999999999999999999999999999999988655 899999988888999887655 5655666552 33568899
Q ss_pred EEEEe-cccC---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 173 WLVLR-FGMF---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 173 ~v~~~-~~~~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+||++ +.+. +.+.+.++++.++++|++|+|||+.
T Consensus 144 ~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 181 (339)
T 1tyy_A 144 WFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNL 181 (339)
T ss_dssp EEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 99998 4331 2467788999999999999999975
No 35
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.90 E-value=1.5e-22 Score=170.11 Aligned_cols=157 Identities=17% Similarity=0.201 Sum_probs=129.5
Q ss_pred EEEecCceeEEE-EeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCCC
Q 028446 18 ILGLQPAALIDH-VARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (209)
Q Consensus 18 v~~iG~~~~vD~-~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~~ 96 (209)
|+++++|+++|+ ++.+ +++ ..|..... ......+||+++|+|++++ +||.+
T Consensus 4 i~tvt~np~iD~~~~~v-----~~~--~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~ 55 (320)
T 3ie7_A 4 IYTITLNPAIDRLLFIR-----GEL--EKRKTNRV--------------------IKTEFDCGGKGLHVSGVLS-KFGIK 55 (320)
T ss_dssp EEEEESSCEEEEEEEES-----SSC--CTTSCCCC--------------------SEEEEEEESHHHHHHHHHH-HHTCC
T ss_pred EEEEecchHHeeeEEEc-----CCc--cCCCeeEe--------------------ceeeecCCchHHHHHHHHH-HcCCC
Confidence 555555999999 9998 555 33544432 3688999999999999999 89999
Q ss_pred eEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCC--eeEEecCCcCCCCCcccCch------hhh
Q 028446 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGN--RTMRPCLSNAVKIQADELIA------EDV 168 (209)
Q Consensus 97 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~--rt~~~~~ga~~~l~~~~i~~------~~l 168 (209)
+.++|.+|+| +|+++++.|+++||+++++...+++|+.++++++ +|+ |+++.++++ .+++++++. +.+
T Consensus 56 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~ 131 (320)
T 3ie7_A 56 NEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGF--TVSQTNKDNLLKQIAKKV 131 (320)
T ss_dssp EEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCC--CCCHHHHHHHHHHHHHHC
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCC--CCCHHHHHHHHHHHHHHh
Confidence 9999999998 9999999999999999999545559999999998 788 888877774 577766642 467
Q ss_pred CCccEEEEeccc---CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 169 KGSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 169 ~~~~~v~~~~~~---~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++++++|+++.+ .+.+.+.++++.++++|++++|||++
T Consensus 132 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 172 (320)
T 3ie7_A 132 KKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSG 172 (320)
T ss_dssp CTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred cCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh
Confidence 899999998433 13578899999999999999999974
No 36
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.89 E-value=1.2e-22 Score=171.62 Aligned_cols=163 Identities=14% Similarity=0.187 Sum_probs=131.5
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
..+.++++| ++++|+++++ ++ |. .|..... +++......+||+++|+|++++ ||
T Consensus 11 ~~~~~~v~G-~~~vD~~~~~-----~~-~~-~g~~~~~-----------------s~~~~~~~~~GG~~~NvA~~la-~L 64 (331)
T 2ajr_A 11 HHMVLTVTL-NPALDREIFI-----ED-FQ-VNRLYRI-----------------NDLSKTQMSPGGKGINVSIALS-KL 64 (331)
T ss_dssp -CCEEEEES-SCEEEEEEEC-----TT-CC-SSCEEEC-----------------CSGGGEEEEEESHHHHHHHHHH-HT
T ss_pred cceEEEEec-chHHeEEEEc-----CC-cc-CCceEEe-----------------ccccceEEecCcHHHHHHHHHH-Hc
Confidence 357889999 9999999998 55 43 3544432 0113688999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCC--CcccceeecCCCceeEEEEEcCCCCe-eEEecCCcCCCCCcccCch-----
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSG--VDVSRLRMKRGPTGQCVCLVDASGNR-TMRPCLSNAVKIQADELIA----- 165 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~g--Vd~~~v~~~~~~T~~~~i~~~~~G~r-t~~~~~ga~~~l~~~~i~~----- 165 (209)
|.++.++|.+|+| +|+++++.|+++| |+++++.+.+ .|++++++++++|+| +++..+++ .+++++++.
T Consensus 65 G~~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~ 140 (331)
T 2ajr_A 65 GVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRY 140 (331)
T ss_dssp TCCEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHH
T ss_pred CCCeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHH
Confidence 9999999999998 9999999999999 9999988764 688888888888999 77767675 477766542
Q ss_pred -hhhCCccEEEEecccC---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 166 -EDVKGSKWLVLRFGMF---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 166 -~~l~~~~~v~~~~~~~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.+.++++||+++.+. +.+.+.++++.++++|++|+|||++
T Consensus 141 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 185 (331)
T 2ajr_A 141 KMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTP 185 (331)
T ss_dssp HHHHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCH
T ss_pred HHhcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCh
Confidence 3468999999985441 2467889999999999999999974
No 37
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.89 E-value=2.7e-22 Score=167.68 Aligned_cols=158 Identities=22% Similarity=0.244 Sum_probs=127.7
Q ss_pred eEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCCC
Q 028446 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (209)
Q Consensus 17 ~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~~ 96 (209)
+|+++++|+++|+++.+ +++ ..|..... .+....+||+++|+|++++ |||.+
T Consensus 3 ~i~~v~~n~~~D~~~~v-----~~~--~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~ 54 (309)
T 3umo_A 3 RIYTLTLAPSLDSATIT-----PQI--YPEGKLRC--------------------TAPVFEPGGGGINVARAIA-HLGGS 54 (309)
T ss_dssp CEEEECSSCEEEEEEEE-----SCC--CSSSEEEC--------------------CCCEEEEESHHHHHHHHHH-HTTCC
T ss_pred cEEEEecchhheEEEEc-----Ccc--cCCCeEEe--------------------ceeeecCCchHHHHHHHHH-HcCCC
Confidence 57777669999999999 555 23554442 4789999999999999999 89999
Q ss_pred eEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEc-CCCCeeEEecCCcCCCCCcccCch--h---hhCC
Q 028446 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIA--E---DVKG 170 (209)
Q Consensus 97 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~-~~G~rt~~~~~ga~~~l~~~~i~~--~---~l~~ 170 (209)
+.++|.+|+| +|+++++.|+++||+++++... ++|+.++++++ ++|+|+++.++++ .+++++++. + .+..
T Consensus 55 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~-~~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~ 130 (309)
T 3umo_A 55 ATAIFPAGGA-TGEHLVSLLADENVPVATVEAK-DWTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIES 130 (309)
T ss_dssp EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECS-SCCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCT
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCceEEEEec-CCCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCC
Confidence 9999999999 9999999999999999988765 35666665554 4899999888886 377776641 1 1357
Q ss_pred ccEEEEeccc---CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 171 SKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 171 ~~~v~~~~~~---~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++++|+++.+ .+.+.+.++++.++++|++++|||++
T Consensus 131 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~ 169 (309)
T 3umo_A 131 GAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSG 169 (309)
T ss_dssp TCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCc
Confidence 8899999543 14678899999999999999999964
No 38
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.89 E-value=1.5e-22 Score=172.11 Aligned_cols=160 Identities=18% Similarity=0.193 Sum_probs=121.4
Q ss_pred CCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhc
Q 028446 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rl 93 (209)
+..+|+++| .+++|+...- ..|+.. ...+...+||+++|+|++|+ ||
T Consensus 23 mm~kv~~~G-E~m~~l~p~~------~~~~~~-------------------------~~~~~~~~GG~~aNvA~~la-rL 69 (351)
T 4gm6_A 23 MMKQVVTIG-ELLMRLSTQQ------GIPFSQ-------------------------TTALDIHIGGAEANVAVNLS-KL 69 (351)
T ss_dssp --CEEEEEC-CCEEEEECCT------TCCGGG-------------------------CSEEEEEEECHHHHHHHHHH-HT
T ss_pred ccCCEEEEc-ceeEEecCCC------CCCccc-------------------------cCeEEEecCChHHHHHHHHH-Hc
Confidence 345899999 9999976432 112110 13688999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEE-cCCCCeeEEecCCcC--CCCCcccCc-hhhhC
Q 028446 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLV-DASGNRTMRPCLSNA--VKIQADELI-AEDVK 169 (209)
Q Consensus 94 G~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~-~~~G~rt~~~~~ga~--~~l~~~~i~-~~~l~ 169 (209)
|.++.|+|+||+|.+|+++++.|+++||+++++.+.+.+++.+++.. +..++++++.++... ..+.+.+++ .+.++
T Consensus 70 G~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~ 149 (351)
T 4gm6_A 70 GHPTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLK 149 (351)
T ss_dssp TCCEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHT
T ss_pred CCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHh
Confidence 99999999999999999999999999999999998877544444444 445666666554322 245555555 45789
Q ss_pred CccEEEEec-cc--C--CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 170 GSKWLVLRF-GM--F--NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~-~~--~--~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+++++|+++ .+ . +.+.+.++++.||++|++|+|||+.
T Consensus 150 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~ 191 (351)
T 4gm6_A 150 GIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNY 191 (351)
T ss_dssp TEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCc
Confidence 999999993 22 1 2467889999999999999999974
No 39
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.89 E-value=5.2e-22 Score=165.93 Aligned_cols=157 Identities=23% Similarity=0.240 Sum_probs=126.6
Q ss_pred eEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCCC
Q 028446 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (209)
Q Consensus 17 ~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~~ 96 (209)
+|++++|++++|+++.+ ++ | ..|..... ......+||+++|+|++++ |||.+
T Consensus 3 ~I~~v~g~~~~D~~~~~-----~~-~-~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~ 54 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATIT-----PQ-I-YPEGKLRC--------------------TAPVFEPGGGGINVARAIA-HLGGS 54 (309)
T ss_dssp CEEEECSSCEEEEEEEE-----SC-C-CSSSEEEC--------------------CCCEEEEESHHHHHHHHHH-HTTCC
T ss_pred eEEEEeccchheEEEEc-----CC-C-cCCCeeec--------------------cceeecCCchHHHHHHHHH-HcCCC
Confidence 57766559999999998 44 3 33544432 3788999999999999999 89999
Q ss_pred eEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEE-EcCCCCeeEEecCCcCCCCCcccCch------hhhC
Q 028446 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCL-VDASGNRTMRPCLSNAVKIQADELIA------EDVK 169 (209)
Q Consensus 97 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~-~~~~G~rt~~~~~ga~~~l~~~~i~~------~~l~ 169 (209)
+.++|.+|+| +|+++++.|+++||+++++.+.+ .|+.++++ ++++|+|+++.++++ .+++++++. +.++
T Consensus 55 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~ 130 (309)
T 3cqd_A 55 ATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIES 130 (309)
T ss_dssp EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCT
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhc
Confidence 9999999998 99999999999999999987654 57777787 888899988777775 466666541 2467
Q ss_pred CccEEEEeccc---CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 170 GSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~---~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+ +++|+++.+ .+.+.+.++++.++++|++++|||++
T Consensus 131 ~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 169 (309)
T 3cqd_A 131 G-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSG 169 (309)
T ss_dssp T-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCH
T ss_pred C-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECCh
Confidence 7 999999544 13578889999999999999999974
No 40
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.89 E-value=4.6e-22 Score=168.10 Aligned_cols=164 Identities=16% Similarity=0.228 Sum_probs=130.2
Q ss_pred cccccccCCCceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHH
Q 028446 6 LIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNT 85 (209)
Q Consensus 6 ~~~~~~~~~~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~ 85 (209)
|.|++.. +.++++| ++++|+++.+ +++ ..|..... ......+||+++|+
T Consensus 14 ~~~~~~~---Mi~~v~G-~~~~D~~~~~-----~~~--~~g~~~~~--------------------~~~~~~~GG~~~Nv 62 (330)
T 2jg1_A 14 LVPRGSH---MILTLTL-NPSVDISYPL-----TAL--KLDDVNRV--------------------QEVSKTAGGKGLNV 62 (330)
T ss_dssp CCCCSSC---CEEEEES-SCEEEEEEEE-----SCC--CTTSEEEE--------------------SCCEEEEECHHHHH
T ss_pred ccCCCCc---EEEEEec-chhheEEEec-----CCc--cCCceEEe--------------------ceEEEcCCchHHHH
Confidence 5676663 3556777 9999999998 444 33554432 26889999999999
Q ss_pred HHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch
Q 028446 86 IRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA 165 (209)
Q Consensus 86 a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~ 165 (209)
|++++ |||.++.++|.+|+ .+|+++++.|+++||+++++.+.+ .|++++++++++ +|+++..+++ .+++++++.
T Consensus 63 A~~la-~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~~ 136 (330)
T 2jg1_A 63 TRVLA-QVGEPVLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEG-QQTEILEQGP--EIDNQEAAG 136 (330)
T ss_dssp HHHHH-HHTCCEEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHH
T ss_pred HHHHH-HhCCCeEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHHH
Confidence 99999 89999999999996 799999999999999999988764 588888888866 7777666665 477666542
Q ss_pred ------hhhCCccEEEEeccc---CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 166 ------EDVKGSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 166 ------~~l~~~~~v~~~~~~---~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.+++++++|+++.+ .+.+.+.++++.|+++|++|+|||++
T Consensus 137 ~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 186 (330)
T 2jg1_A 137 FIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSG 186 (330)
T ss_dssp HHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCH
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCc
Confidence 236789999998433 13467888999999999999999974
No 41
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.88 E-value=9.4e-22 Score=165.60 Aligned_cols=158 Identities=14% Similarity=0.188 Sum_probs=128.4
Q ss_pred CceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcC
Q 028446 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG 94 (209)
++.++++| ++++|+++.+ ++ | ..|..... ......+||+++|+|++++ |||
T Consensus 2 ~m~i~v~g-~~~~D~~~~v-----~~-~-~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG 52 (323)
T 2f02_A 2 SLIVTVTM-NPSIDISYLL-----DH-L-KLDTVNRT--------------------SQVTKTPGGKGLNVTRVIH-DLG 52 (323)
T ss_dssp CCEEEEES-SCEEEEEEEC-----SC-C-CTTSEEEE--------------------SCEEEEEESHHHHHHHHHH-HHT
T ss_pred ceEEEEec-CceeEEEEec-----CC-c-ccCCEEEe--------------------ceEEEcCCcHHHHHHHHHH-HcC
Confidence 46899999 9999999998 44 4 33554443 2688999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch------hhh
Q 028446 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDV 168 (209)
Q Consensus 95 ~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~------~~l 168 (209)
.++.++|.+|+ .+|+++++.|++.||+++++.+.+ .|++++++++++ +|+++..+++ .+++++++. +.+
T Consensus 53 ~~~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~ 127 (323)
T 2f02_A 53 GDVIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLI 127 (323)
T ss_dssp CCEEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhc
Confidence 99999999997 699999999999999999988754 688888888866 7777666665 477766542 246
Q ss_pred CCccEEEEeccc---CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 169 KGSKWLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 169 ~~~~~v~~~~~~---~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++++++|+++.+ .+.+.+.++++.++++|++++|||++
T Consensus 128 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 168 (323)
T 2f02_A 128 KQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSG 168 (323)
T ss_dssp TTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCT
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECCh
Confidence 899999998433 12467888999999999999999975
No 42
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.88 E-value=9.1e-22 Score=164.57 Aligned_cols=154 Identities=24% Similarity=0.248 Sum_probs=124.6
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~ 95 (209)
.+|+++| ++++|++.... +.... +......+||+++|+|++++ |||.
T Consensus 2 ~~v~viG-~~~~D~~~~~~-----------~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~ 48 (311)
T 2dcn_A 2 AKLITLG-EILIEFNALSP-----------GPLRH--------------------VSYFEKHVAGSEANYCVAFI-KQGN 48 (311)
T ss_dssp CEEEEES-CCEEEEEESSS-----------SCGGG--------------------CCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CCEEEEC-CceEEEecCCC-----------Ccccc--------------------cceeeecCCChHHHHHHHHH-HCCC
Confidence 4799999 99999987331 11110 13678899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCC--eeEEecC--CcCCCCCcccCchhhhCC
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGN--RTMRPCL--SNAVKIQADELIAEDVKG 170 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~--rt~~~~~--ga~~~l~~~~i~~~~l~~ 170 (209)
++.++|.+|+|.+|+++++.|+++||+++++.+.++ +|+.++++++++|+ |+++.+. ++...+++++++...+++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 128 (311)
T 2dcn_A 49 ECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKS 128 (311)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTT
T ss_pred ceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcC
Confidence 999999999999999999999999999999987665 89999999988899 9887654 566778888888777899
Q ss_pred ccEEEEe-ccc--C--CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 171 SKWLVLR-FGM--F--NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 171 ~~~v~~~-~~~--~--~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++++|++ +.. . +.+.+.++++.++++ +|||+.
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~ 165 (311)
T 2dcn_A 129 ADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNI 165 (311)
T ss_dssp CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCC
T ss_pred CCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccC
Confidence 9999998 322 1 235566777766554 899975
No 43
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.88 E-value=9.1e-22 Score=164.82 Aligned_cols=154 Identities=18% Similarity=0.204 Sum_probs=123.7
Q ss_pred ceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC
Q 028446 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~ 95 (209)
++|+++| ++++|++...+ +.... +..+...+||+++|+|++++ |||.
T Consensus 2 ~~v~viG-~~~~D~~~~~~-----------~~~~~--------------------~~~~~~~~GG~~~N~A~~la-~LG~ 48 (313)
T 2v78_A 2 VDVIALG-EPLIQFNSFNP-----------GPLRF--------------------VNYFEKHVAGSELNFCIAVV-RNHL 48 (313)
T ss_dssp CCEEEEC-CCEEEEEESSS-----------SCGGG--------------------CCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CeEEEEC-cceEEEecCCC-----------Ccccc--------------------cceeEecCCChHHHHHHHHH-HCCC
Confidence 3799999 99999986321 11110 13678999999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEE--EcCCCCeeEEecC--CcCCCCCcccCchhhhCC
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCL--VDASGNRTMRPCL--SNAVKIQADELIAEDVKG 170 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~--~~~~G~rt~~~~~--ga~~~l~~~~i~~~~l~~ 170 (209)
++.++|++|+|.+|+++++.|+++||+++++.+.++ +|+.+++. ++++|+|+++.++ ++...+++++++...+++
T Consensus 49 ~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (313)
T 2v78_A 49 SCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRN 128 (313)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHT
T ss_pred cEEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcC
Confidence 999999999999999999999999999999987665 89999998 8888999887654 566778888888777889
Q ss_pred ccEEEEe-ccc--C--CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 171 SKWLVLR-FGM--F--NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 171 ~~~v~~~-~~~--~--~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+++||++ +.. . +.+.+.++++.++++ +|||+.
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~ 165 (313)
T 2v78_A 129 SRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNI 165 (313)
T ss_dssp SSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCC
T ss_pred CCEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcC
Confidence 9999998 322 0 235566666666544 899975
No 44
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.86 E-value=1.1e-21 Score=167.55 Aligned_cols=166 Identities=17% Similarity=0.187 Sum_probs=121.1
Q ss_pred CCCceEEEecCceeEEEEee--cChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHH
Q 028446 13 SQAALILGLQPAALIDHVAR--VDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLS 90 (209)
Q Consensus 13 ~~~~~v~~iG~~~~vD~~~~--~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la 90 (209)
.++.+|+++| ++++|+++. ++. +.++.|.+ .... ......+||+ +|+|++++
T Consensus 51 ~~~~~ilvvG-~~~~D~~~~g~v~r-~~p~~p~~---~~~~--------------------~~~~~~~GG~-~NvA~~la 104 (352)
T 4e84_A 51 LARSRVLVVG-DVMLDRYWFGNVDR-ISPEAPVP---VVHV--------------------QRQEERLGGA-ANVARNAV 104 (352)
T ss_dssp HTTCEEEEEE-CEEEEEEEEEEEEE-ECSSSSSE---EEEE--------------------EEEEEEEEEH-HHHHHHHH
T ss_pred cCCCcEEEEC-ccceEEEEeecccc-cCCCCCcc---eEEe--------------------eEEEEecChH-HHHHHHHH
Confidence 4678999999 999999987 410 00222332 1111 2678899997 89999999
Q ss_pred hhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecC-CcCCCCCcccCc--hh
Q 028446 91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCL-SNAVKIQADELI--AE 166 (209)
Q Consensus 91 ~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~-ga~~~l~~~~i~--~~ 166 (209)
|||.++.++|.+|+|.+|+++++.|+++||++. +.+.++ +|+.+++++++++++..+.+. +.+..+.++.++ .+
T Consensus 105 -~LG~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~-~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (352)
T 4e84_A 105 -TLGGQAGLLCVVGCDEPGERIVELLGSSGVTPH-LERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARFDV 182 (352)
T ss_dssp -HTTCEEEEEEEEESSHHHHHHHHHHTTTSCEEE-EEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHHHH
T ss_pred -HcCCCEEEEEEeCCChhHHHHHHHHHHcCCcee-eEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 899999999999999999999999999999994 444444 899999999865555444433 332222222221 34
Q ss_pred hhCCccEEEEe-cccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 167 DVKGSKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 167 ~l~~~~~v~~~-~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.++++++||++ +...+.+.+.++++.|+++|++|+|||++
T Consensus 183 ~l~~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 223 (352)
T 4e84_A 183 LLPQHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPKG 223 (352)
T ss_dssp HGGGCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECCS
T ss_pred hcccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECCC
Confidence 67899999999 32123344788999999999999999986
No 45
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.85 E-value=6.2e-21 Score=158.35 Aligned_cols=128 Identities=15% Similarity=0.138 Sum_probs=99.1
Q ss_pred EecCChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCc
Q 028446 76 TIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSN 154 (209)
Q Consensus 76 ~~~GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga 154 (209)
..+||+++|+|++++ |||.++.++|.+|+|.+|+++++.|+++|| +++.+.++ +|+.++++++++|+|++..+.+.
T Consensus 21 ~~~GG~~~N~A~~la-~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~ 97 (296)
T 2qhp_A 21 KKIGGAPANFAYHVS-QFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGV 97 (296)
T ss_dssp EEEECHHHHHHHHHH-HTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSC
T ss_pred CCCCCHHHHHHHHHH-HcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCC
Confidence 579999999999999 899999999999999999999999999999 77776644 89999998888899988776664
Q ss_pred -CCCCCcccCchhhhCCccEEEEecc-cC---CHHHHHHHHHHHHH-CCCeEEEeCCC
Q 028446 155 -AVKIQADELIAEDVKGSKWLVLRFG-MF---NFEVIQAAIRIAKQ-EGLSVSMDLAS 206 (209)
Q Consensus 155 -~~~l~~~~i~~~~l~~~~~v~~~~~-~~---~~~~~~~l~~~a~~-~g~~v~~D~~~ 206 (209)
...+++++...+.++++++||+++. .. +.+.+.++++.+++ +|++++|||+.
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~ 155 (296)
T 2qhp_A 98 AWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINL 155 (296)
T ss_dssp GGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCC
T ss_pred hhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcC
Confidence 3456544333456789999999842 21 24667788888877 69999999975
No 46
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.85 E-value=1.4e-20 Score=157.17 Aligned_cols=155 Identities=19% Similarity=0.230 Sum_probs=123.2
Q ss_pred EEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCCCe
Q 028446 18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPC 97 (209)
Q Consensus 18 v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~~~ 97 (209)
|+.+.+++++|+++.+ +++ ..|..... ......+||+++|+|++++ |||.++
T Consensus 2 i~tv~~n~~~D~~~~~-----~~~--~~g~~~~~--------------------~~~~~~~GG~~~N~A~~la-~LG~~~ 53 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQV-----ENF--QQGVVNRS--------------------ERDRKQPGGKGINVSRVLK-RLGHET 53 (306)
T ss_dssp EEEEESSCEEEEEEEC-----TTC--CSSSEEEC--------------------SEEEEEEECHHHHHHHHHH-HTTCCC
T ss_pred EEEEecCchheEEEEc-----CCc--ccCCeEEe--------------------ceeEecCCchHHHHHHHHH-HcCCCc
Confidence 4444449999999998 444 34554442 2688999999999999999 899999
Q ss_pred EEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch--hh---hCCcc
Q 028446 98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---VKGSK 172 (209)
Q Consensus 98 ~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~--~~---l~~~~ 172 (209)
.++|.+|+ .+|+++++.|++.||+++++.+.+ .|+.++++ ++|+|+++..+++ .+++++++. +. +++++
T Consensus 54 ~~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 127 (306)
T 2abq_A 54 KALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGD 127 (306)
T ss_dssp EEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred eEEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCC
Confidence 99999998 899999999999999999998754 58888776 4789987766664 477766642 12 57899
Q ss_pred EEEEeccc---CCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 173 WLVLRFGM---FNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 173 ~v~~~~~~---~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++|+++.+ .+.+.+.++++.++++|++++|||++
T Consensus 128 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 164 (306)
T 2abq_A 128 VLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSG 164 (306)
T ss_dssp EEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh
Confidence 99998433 13467888999999999999999974
No 47
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.85 E-value=2.9e-20 Score=154.96 Aligned_cols=153 Identities=16% Similarity=0.183 Sum_probs=121.8
Q ss_pred EEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcCCCeE
Q 028446 19 LGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCG 98 (209)
Q Consensus 19 ~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~~~~ 98 (209)
.+.| ++++|+++.+ +++ ..|..... ......+||+++|+|++++ |||.++.
T Consensus 4 tvt~-n~~~D~~~~~-----~~~--~~g~~~~~--------------------~~~~~~~GG~~~N~A~~la-~LG~~~~ 54 (306)
T 2jg5_A 4 TVTF-NPSIDYVIFT-----NDF--KIDGLNRA--------------------TATYKFAGGKGINVSRVLK-TLDVEST 54 (306)
T ss_dssp EEES-SCEEEEEEEC-----SSC--CTTSEEEC--------------------SEEEEEEESHHHHHHHHHH-HTTCCCE
T ss_pred EEec-CceEEEEEEc-----CCc--ccCceEEe--------------------ceeEecCCchHHHHHHHHH-HcCCCee
Confidence 4455 9999999998 443 33554432 3688999999999999999 8999999
Q ss_pred EEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch--hh---hCCccE
Q 028446 99 LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---VKGSKW 173 (209)
Q Consensus 99 ~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~--~~---l~~~~~ 173 (209)
++|.+|+ .+|+++++.|++.||+++++.+.+ +|+.++++ ++|+|+++..+++ .+++++++. +. ++++++
T Consensus 55 ~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T 2jg5_A 55 ALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--KTGQETEINAPGP--HITSTQFEQLLQQIKNTTSEDI 128 (306)
T ss_dssp EEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--ESSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--cCCCEEEEECCCC--CCCHHHHHHHHHHHHhccCCCE
Confidence 9999999 799999999999999999988753 58888776 4789987777775 467666542 11 578999
Q ss_pred EEEecccC---CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 174 LVLRFGMF---NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 174 v~~~~~~~---~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+|+++.+. +.+.+.++++.++++|++++|||++
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 164 (306)
T 2jg5_A 129 VIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEK 164 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCH
T ss_pred EEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECCh
Confidence 99984441 2467888999999999999999974
No 48
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.83 E-value=2e-19 Score=152.84 Aligned_cols=132 Identities=15% Similarity=0.238 Sum_probs=108.4
Q ss_pred CceEecCChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCe-eEEec
Q 028446 73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNR-TMRPC 151 (209)
Q Consensus 73 ~~~~~~GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~r-t~~~~ 151 (209)
.+...+||+++|+|++++ |||.++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.+++.++. |+| +++.+
T Consensus 38 ~~~~~~GG~~~NvA~~la-~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~ 115 (351)
T 2afb_A 38 SFDVTYGGAEANVAAFLA-QMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVY 115 (351)
T ss_dssp EEEEEEECHHHHHHHHHH-HTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEE
T ss_pred eeeEecCChHHHHHHHHH-HcCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEE
Confidence 678999999999999999 899999999999999999999999999999999998754589998887764 555 55554
Q ss_pred CC---cCCCCCcccCch-hhhCCccEEEEeccc--CC---HHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 152 LS---NAVKIQADELIA-EDVKGSKWLVLRFGM--FN---FEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 152 ~g---a~~~l~~~~i~~-~~l~~~~~v~~~~~~--~~---~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+ +...+++++++. ..++++++||+++.. .+ .+.+.++++.++++|++++|||+.
T Consensus 116 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 179 (351)
T 2afb_A 116 DRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNY 179 (351)
T ss_dssp ECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred eCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 32 335677777764 346899999999322 11 377888999999999999999984
No 49
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.78 E-value=1.4e-18 Score=145.57 Aligned_cols=146 Identities=17% Similarity=0.197 Sum_probs=113.2
Q ss_pred CceEEEecCceeEEEEeecChhHHHhCCCCCCCceecCHHHHHHHHHHhhhccCCCCCCceEecCChHHHHHHHHHhhcC
Q 028446 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~v~~iG~~~~vD~~~~~~~~~l~~~p~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG 94 (209)
.++|+++| ++++|++... .+ .....+||+++|+|++++ |||
T Consensus 2 ~~~ilviG-~~~iD~~~~~-----------~~--------------------------~~~~~~GG~~~NvA~~la-~LG 42 (313)
T 3kd6_A 2 SLSLLVIG-SLAFDDIETP-----------FG--------------------------RSDNTLGGSSTYIALSAS-YFT 42 (313)
T ss_dssp -CCEEEES-CCEEEEEECS-----------SC--------------------------EEEEEEECHHHHHHHHHT-TTC
T ss_pred CccEEEEe-EEEEeeecCC-----------CC--------------------------cccccCCCHHHHHHHHHH-HhC
Confidence 46899999 9999998542 11 467899999999999999 899
Q ss_pred C-CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEE--EEEcCCCCeeEEecCCcCCCCCcccCchhhhCC
Q 028446 95 V-PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCV--CLVDASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (209)
Q Consensus 95 ~-~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~--i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~ 170 (209)
. ++.++|.+|+| +|+++++.|+++||+++++.+.++ +|.... ...+.++++++....++...+.+. + .+.+++
T Consensus 43 ~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 119 (313)
T 3kd6_A 43 DEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH-V-PQYYRD 119 (313)
T ss_dssp SSCEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC-C-CGGGTT
T ss_pred CCceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc-c-hHHHcc
Confidence 9 99999999999 999999999999999999988764 674321 123345666776666665566553 2 346789
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+++||++. + +++...++++.+ +.+.+++|||.
T Consensus 120 ~~~v~~~~-~-~~~~~~~~~~~~-~~~~~v~~Dp~ 151 (313)
T 3kd6_A 120 SKFVCLGN-I-DPELQLKVLDQI-DDPKLVVCDTM 151 (313)
T ss_dssp CSEEEECS-S-CHHHHHHHHTTC-SSCSEEEEECC
T ss_pred CCEEEEcC-C-CHHHHHHHHHHH-hhCCEEEEcCh
Confidence 99999975 3 556667777777 67899999984
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.74 E-value=2.3e-18 Score=143.38 Aligned_cols=125 Identities=16% Similarity=0.051 Sum_probs=97.7
Q ss_pred CceEecCChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC
Q 028446 73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 73 ~~~~~~GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ 152 (209)
.....+||+++|+|++++ |||.++.++|.+|+|. +.+++.|+++||+++++.. +.+|+++.++ +++|+|+++.+.
T Consensus 30 ~~~~~~GG~~~NvA~~la-~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~~g~~~~~~~~ 104 (298)
T 1vk4_A 30 KREIAYGGGVVMGAITSS-LLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GSDPDTRESFLI 104 (298)
T ss_dssp EEEEEEECHHHHHHHHHH-HTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC------CCEEEEE
T ss_pred eEEEecCCHHHHHHHHHH-HcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cCCCCeeEEEec
Confidence 577899999999999999 8999999999999997 7888999999999998764 3467777665 557899888777
Q ss_pred CcCCCCCcccCchhhhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 153 SNAVKIQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 153 ga~~~l~~~~i~~~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++...+++++++. .+++++|++... +.+...++++.++++|++|+|||++
T Consensus 105 ~~~~~l~~~~~~~---~~~~~v~~~~~~-~~~~~~~~~~~~~~~g~~v~~D~~~ 154 (298)
T 1vk4_A 105 SAADPFTESDLAF---IEGEAVHINPLW-YGEFPEDLIPVLRRKVMFLSADAQG 154 (298)
T ss_dssp ECCCCCCGGGGGG---CCSSEEEECCSS-TTSSCGGGHHHHHHHCSEEEEETHH
T ss_pred cccccCCHHHcCc---CCCCEEEECCcc-cccccHHHHHHHHHcCCEEEEecCc
Confidence 7777788877653 689999998432 2233346778888899999999973
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=97.83 E-value=4.3e-06 Score=69.33 Aligned_cols=91 Identities=14% Similarity=0.210 Sum_probs=62.7
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCcccceeec--CCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch--hh----
Q 028446 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK--RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---- 167 (209)
Q Consensus 96 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~--~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~--~~---- 167 (209)
++.++|.+|+|. |+++ |++.||+++++... .++|++++ +.| ..+++++++. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~-------------~~g--~~l~~~~i~~~~~~~~~~ 72 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH-------------WKG--QVLNSDELQELYEGLRLN 72 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC-------------CCE--EECCHHHHHHHHHHHHHT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC-------------ccC--ccCCHHHHHHHHHHHHhc
Confidence 578899999998 9998 99999999887653 22333221 222 2466666541 11
Q ss_pred -hCCccEEEEecccCC---HHHHHHHHHHHHHCCCe--EEEeCCC
Q 028446 168 -VKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLS--VSMDLAS 206 (209)
Q Consensus 168 -l~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~--v~~D~~~ 206 (209)
+.+++++++++.. + .+.+.++++.++++|.+ ++|||+.
T Consensus 73 ~~~~~~~v~~G~~~-~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~ 116 (312)
T 2yxt_A 73 NMNKYDYVLTGYTR-DKSFLAMVVDIVQELKQQNPRLVYVCDPVL 116 (312)
T ss_dssp TCCCCSEEEECCCC-CHHHHHHHHHHHHHHHHHCTTCEEEECCCC
T ss_pred CCccCCEEEECCCC-CHHHHHHHHHHHHHHHhhCCCCeEEECCCc
Confidence 6789999887533 4 45566888999988864 8999874
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=97.12 E-value=0.00022 Score=58.10 Aligned_cols=98 Identities=12% Similarity=0.179 Sum_probs=64.6
Q ss_pred hcCCCeEE-EEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCch-----
Q 028446 92 GFGVPCGL-IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA----- 165 (209)
Q Consensus 92 rlG~~~~~-ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~----- 165 (209)
-|+..... +|.+|+| ..++.|++.||++.++.. + ++.+..|.|.+ .+ ..++++++..
T Consensus 18 vL~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l 80 (283)
T 2ddm_A 18 IVAVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRAL 80 (283)
T ss_dssp EEEEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHH
T ss_pred EEEEecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHH
Confidence 46666554 8888888 356789999999987753 1 22344566652 22 2355555431
Q ss_pred -h--hhCCccEEEEecccC--CHHHHHHHHHHHHH--CCCeEEEeCCC
Q 028446 166 -E--DVKGSKWLVLRFGMF--NFEVIQAAIRIAKQ--EGLSVSMDLAS 206 (209)
Q Consensus 166 -~--~l~~~~~v~~~~~~~--~~~~~~~l~~~a~~--~g~~v~~D~~~ 206 (209)
+ .++++++|++++... ..+.+.++++.+++ +|++|+|||+.
T Consensus 81 ~~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~ 128 (283)
T 2ddm_A 81 QERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVI 128 (283)
T ss_dssp HHTTCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCC
T ss_pred HhcCCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcc
Confidence 1 356789999985221 14567788888887 79999999874
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=94.82 E-value=0.0094 Score=48.50 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=54.9
Q ss_pred eEEEEEecCChhHHHHHHHHHhCCCcccc--eeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCc---hhhhC--
Q 028446 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSR--LRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI---AEDVK-- 169 (209)
Q Consensus 97 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~--v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~---~~~l~-- 169 (209)
..+++.+|+|.+|.. |+..+. +.. .+.++.+++... .++++..... ...++++.+. ...++
T Consensus 26 ~~vl~i~G~D~~gga--------gi~a~~~~~~~-~g~~g~~~it~~-~~~n~~~~~~--~~~~~~~~~~~~~~~l~~~~ 93 (288)
T 1jxh_A 26 INALTIAGTDPSGGA--------GIQADLKTFSA-LGAYGCSVITAL-VAENTCGVQS--VYRIEPDFVAAQLDSVFSDV 93 (288)
T ss_dssp CEEEEEEECCTTSSS--------HHHHHHHHHHH-TTCEEEEEEEEE-EEEETTEEEE--EEECCHHHHHHHHHHHHTTS
T ss_pred CEEEEEeCcCCCchH--------HHHHHHHHHHH-cCCEEeEEeeEE-EeecCCCeee--eeeCCHHHHHHHHHHHHhCC
Confidence 468999999998873 222221 111 123333333221 1222221111 1234444432 12333
Q ss_pred CccEEEEecccCCHHHHHHHHHHHHHCCCe-EEEeCCCC
Q 028446 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLS-VSMDLASF 207 (209)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~-v~~D~~~~ 207 (209)
++++|++++.. +.+.+..+++.+++.+++ |+|||+..
T Consensus 94 ~~~~v~~G~l~-~~~~~~~~~~~~~~~~~~~vvlDp~~~ 131 (288)
T 1jxh_A 94 RIDTTKIGMLA-ETDIVEAVAERLQRHHVRNVVLDTVML 131 (288)
T ss_dssp CCSEEEECCCC-SHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred CCCEEEECCCC-CHHHHHHHHHHHHHCCCCeEEEcCccc
Confidence 37888887533 678888999999999996 99999764
No 54
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=94.55 E-value=0.19 Score=43.84 Aligned_cols=125 Identities=10% Similarity=0.096 Sum_probs=67.3
Q ss_pred ecCChHHHHHHHHHhhcCCCeEE--EEEecCChhHHHHHHHHHhCCCccc-----ceee-------cCCCceeEEEEE--
Q 028446 77 IAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVS-----RLRM-------KRGPTGQCVCLV-- 140 (209)
Q Consensus 77 ~~GG~~~N~a~~la~rlG~~~~~--ig~vG~D~~G~~i~~~L~~~gVd~~-----~v~~-------~~~~T~~~~i~~-- 140 (209)
..||.+.-+|..+| ++|.++.+ ++.+|. ..++.|...+|... .+.. ...+.-.-+|+-
T Consensus 117 ~mGGnAgimAn~la-~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~ 190 (467)
T 1gc5_A 117 RIGGQAGIMANLLG-GVYRIPTIVHVPQNPK-----LQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFP 190 (467)
T ss_dssp EEESHHHHHHHHHH-HTSCCCEEECCSCCCH-----HHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEEC
T ss_pred ccCccHHHHHHHHH-hcCCCEEEEcCCCCCH-----HHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcC
Confidence 99999999999999 89999877 555554 45555542333211 0000 001222233322
Q ss_pred ---------cCCCCeeEEecCCcCCCCCc-ccCc---hhhhCCccEEEEe-ccc--C---C---H----HHHHHHHHHHH
Q 028446 141 ---------DASGNRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGM--F---N---F----EVIQAAIRIAK 194 (209)
Q Consensus 141 ---------~~~G~rt~~~~~ga~~~l~~-~~i~---~~~l~~~~~v~~~-~~~--~---~---~----~~~~~l~~~a~ 194 (209)
.|--+|-++.+.-.+..+.. +++. .+...++|.+.++ +.+ . + . +.+.+.++..+
T Consensus 191 ~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~ 270 (467)
T 1gc5_A 191 RGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILN 270 (467)
T ss_dssp SSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHH
T ss_pred CCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhc
Confidence 23334444444433334432 3332 1233569999999 432 2 1 1 22333444436
Q ss_pred HCCCeEEEeCCCC
Q 028446 195 QEGLSVSMDLASF 207 (209)
Q Consensus 195 ~~g~~v~~D~~~~ 207 (209)
..+++|-|...++
T Consensus 271 ~~~~~iH~E~As~ 283 (467)
T 1gc5_A 271 RYNVKSHFEFAYT 283 (467)
T ss_dssp HTTCEEEEECCCC
T ss_pred CCCCeEEEEECCc
Confidence 7889999988765
No 55
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=94.35 E-value=0.32 Score=42.32 Aligned_cols=126 Identities=13% Similarity=0.076 Sum_probs=69.0
Q ss_pred EecCChHHHHHHHHHhhcCCCeEE--EEEecCChhHHHHHHHHHhCCCcccce-----e-------ecCCCceeEEEEEc
Q 028446 76 TIAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSRL-----R-------MKRGPTGQCVCLVD 141 (209)
Q Consensus 76 ~~~GG~~~N~a~~la~rlG~~~~~--ig~vG~D~~G~~i~~~L~~~gVd~~~v-----~-------~~~~~T~~~~i~~~ 141 (209)
...||.+..+|..++ ++|.++.+ ++.+|.. +.+.|...+|..-.+ . ....+....+|+=-
T Consensus 108 ~~~GGnA~imAn~la-~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef 181 (455)
T 1ua4_A 108 LRMGGQAGIMANLLG-GVYGVPVIVHVPQLSRL-----QANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYEF 181 (455)
T ss_dssp EEEESHHHHHHHHHT-TTTCCCEEECCSCCCHH-----HHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEEE
T ss_pred cccCCcHHHHHHHHH-HcCCCEEEEeCCCCCHH-----HHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEEc
Confidence 399999999999999 89999877 7766653 455554233433001 0 00124445555443
Q ss_pred CCCCe-----------eEEecCCcCCCCC-cccCch---hhhCCccEEEEe-ccc---CC-HH---HHHHHHHHHHHCCC
Q 028446 142 ASGNR-----------TMRPCLSNAVKIQ-ADELIA---EDVKGSKWLVLR-FGM---FN-FE---VIQAAIRIAKQEGL 198 (209)
Q Consensus 142 ~~G~r-----------t~~~~~ga~~~l~-~~~i~~---~~l~~~~~v~~~-~~~---~~-~~---~~~~l~~~a~~~g~ 198 (209)
+.|++ -++.+.-.+..+. .+++.. +...++|.+.++ +.+ .+ .+ ..++.++..++.++
T Consensus 182 ~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~ 261 (455)
T 1ua4_A 182 PRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREI 261 (455)
T ss_dssp CTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCc
Confidence 44443 2233332223332 233321 222359999999 433 12 12 22222223477889
Q ss_pred eEEEeCCCC
Q 028446 199 SVSMDLASF 207 (209)
Q Consensus 199 ~v~~D~~~~ 207 (209)
+|-|++.++
T Consensus 262 ~iH~ElAs~ 270 (455)
T 1ua4_A 262 PVHLEFAFT 270 (455)
T ss_dssp CEEEECCCC
T ss_pred eEEEEeCCc
Confidence 999998875
No 56
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=94.04 E-value=0.41 Score=41.86 Aligned_cols=177 Identities=12% Similarity=0.144 Sum_probs=96.2
Q ss_pred CceEEEecCceeEEEEeecChhHHH----hC------------CC------------------CCCCceecCHHHHHHHH
Q 028446 15 AALILGLQPAALIDHVARVDWSLLD----QI------------PG------------------ERGGSIPVAIEELEHIL 60 (209)
Q Consensus 15 ~~~v~~iG~~~~vD~~~~~~~~~l~----~~------------p~------------------~~g~~~~~~~~~~~~i~ 60 (209)
...|++- -|++||.+++.+.+.+. ++ |. -.+.+..+..+++.+++
T Consensus 27 ~~~i~~a-yN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~~~~~ 105 (474)
T 3drw_A 27 HLSIYTA-YNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNEKMNEWF 105 (474)
T ss_dssp TCEEEEE-SCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCTTHHHHH
T ss_pred cCceEEE-ecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccHhHHHHH
Confidence 4466665 59999999998774332 22 11 11233333333445555
Q ss_pred HHhhhccCCCCCCceEecCChHHHHHHHHHhhcCC-CeEEEEEecCChhHHHHHHHHHhCCC------------------
Q 028446 61 SEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQLFVSNMQFSGV------------------ 121 (209)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~GG~~~N~a~~la~rlG~-~~~~ig~vG~D~~G~~i~~~L~~~gV------------------ 121 (209)
..-. ..-....||.+.-+|..|| ++|. +|.+.+..+.. ...+.| ..+|
T Consensus 106 ~~~~-------~~~~~~~GGnA~imAn~La-~lg~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea 172 (474)
T 3drw_A 106 DKTF-------RYEEERLGGQAGIIANTLA-GLKIRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEA 172 (474)
T ss_dssp HHHC-------CCSEEEEESHHHHHHHHHH-HTTCSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGC
T ss_pred HHhc-------ccceEecCChHHHHHHHHH-HcCCCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhh
Confidence 4211 1236789999999999999 8999 57777666554 333334 2222
Q ss_pred -------cccceeecCCCceeEEE-----EEcCCCCeeEEecCCcCC-CCC-cccCch---hhhCCccEEEEe-ccc-CC
Q 028446 122 -------DVSRLRMKRGPTGQCVC-----LVDASGNRTMRPCLSNAV-KIQ-ADELIA---EDVKGSKWLVLR-FGM-FN 182 (209)
Q Consensus 122 -------d~~~v~~~~~~T~~~~i-----~~~~~G~rt~~~~~ga~~-~l~-~~~i~~---~~l~~~~~v~~~-~~~-~~ 182 (209)
+..++.-- +.|..+- ++.|--+|-++.+.-.+. .+. .+++.. +.-+++|.++++ +.. ..
T Consensus 173 ~~~~~~~~iH~I~Ey--~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~ 250 (474)
T 3drw_A 173 YREGDPLKINRIFEF--RKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRT 250 (474)
T ss_dssp CCTTCCCCEEEEEEE--CTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCS
T ss_pred hccCCCCCcEEEEEc--CCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccc
Confidence 11111111 1111111 233444454555544444 443 344432 222369999999 433 11
Q ss_pred --------H---HHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 183 --------F---EVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 183 --------~---~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
. +.+.+.++..+..+++|-|...++
T Consensus 251 ~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~ 286 (474)
T 3drw_A 251 KYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASV 286 (474)
T ss_dssp BCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred cccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCcc
Confidence 1 233455666678999999988765
No 57
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=93.69 E-value=0.15 Score=44.40 Aligned_cols=125 Identities=17% Similarity=0.131 Sum_probs=66.8
Q ss_pred ecCChHHHHHHHHHhhcCCCeEE--EEEecCChhHHHHHHHHHhCCCcccc-----eee-------cCCCceeEEE----
Q 028446 77 IAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSR-----LRM-------KRGPTGQCVC---- 138 (209)
Q Consensus 77 ~~GG~~~N~a~~la~rlG~~~~~--ig~vG~D~~G~~i~~~L~~~gVd~~~-----v~~-------~~~~T~~~~i---- 138 (209)
+.||.+.-+|..+| ++|.++.+ ++.+|. ..++.|...+|..-. +.. ...+.-.-+|
T Consensus 112 ~mGGnA~imAn~la-~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~ 185 (457)
T 1l2l_A 112 RMGGQVGIMANLLG-GVYGIPVIAHVPQLSE-----LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFP 185 (457)
T ss_dssp EEESHHHHHHHHHT-TTSCCCEEECCSSCCH-----HHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCEEC
T ss_pred ccCchHHHHHHHHH-HcCCCEEEEcCCCCCH-----HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEEcC
Confidence 99999999999999 89999876 555554 455555423322110 000 0001111122
Q ss_pred -------EEcCCCCeeEEecCCcCCCCCc-ccCc---hhhhCCccEEEEe-ccc-CC---H---HHHHHHHHHHHHCCCe
Q 028446 139 -------LVDASGNRTMRPCLSNAVKIQA-DELI---AEDVKGSKWLVLR-FGM-FN---F---EVIQAAIRIAKQEGLS 199 (209)
Q Consensus 139 -------~~~~~G~rt~~~~~ga~~~l~~-~~i~---~~~l~~~~~v~~~-~~~-~~---~---~~~~~l~~~a~~~g~~ 199 (209)
++.|--+|-++.+.-.+..+.. +++. .+...++|.+.++ +.+ .. . +...+.++..++.+++
T Consensus 186 ~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~ 265 (457)
T 1l2l_A 186 RNFKVLDFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIR 265 (457)
T ss_dssp TTCEETTEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeecceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCe
Confidence 2234344544544443334432 3332 1233569999999 433 22 1 2233334444788999
Q ss_pred EEEeCCCC
Q 028446 200 VSMDLASF 207 (209)
Q Consensus 200 v~~D~~~~ 207 (209)
|-|...++
T Consensus 266 iH~E~As~ 273 (457)
T 1l2l_A 266 AHLEFAFT 273 (457)
T ss_dssp EEEECCCC
T ss_pred EEEEECCc
Confidence 99988765
No 58
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=89.07 E-value=0.26 Score=38.85 Aligned_cols=97 Identities=10% Similarity=0.008 Sum_probs=53.9
Q ss_pred EEEEEecCChhHHHHHHHHHhCCCcccceeecCC-CceeEEEEEcCCCCeeEEecCCcCCCCCcccCc---hhhhC--Cc
Q 028446 98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELI---AEDVK--GS 171 (209)
Q Consensus 98 ~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~-~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~---~~~l~--~~ 171 (209)
.+++..|.|.+|..-... ++..++.... .++...++...+.....- ...++++.+. ...++ +.
T Consensus 3 ~vl~i~G~d~~ggag~~a------~~~~~~~~~~~g~~~vt~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 71 (258)
T 1ub0_A 3 VALTIAGSDSGGGAGVQA------DLKVFFRFGVYGTSALTLVTAQNTLGVQR-----VHLLPPEVVYAQIESVAQDFPL 71 (258)
T ss_dssp EEEEEEEEETTSSSHHHH------HHHHHHHTTCEEEEEEEEEEEEETTEEEE-----EEECCHHHHHHHHHHHHHHSCC
T ss_pred EEEEEeccCCCchHHHHH------HHHHHHHhCCEEeEeeeEEEeecCCceeE-----EEeCCHHHHHHHHHHHHcCCCC
Confidence 467888988888643321 2222222222 344444444333222110 1134444332 11222 46
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCC-CeEEEeCCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEG-LSVSMDLAS 206 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g-~~v~~D~~~ 206 (209)
+.+++++ +.+.+.+..+++.+++.+ ++++|||+.
T Consensus 72 ~~v~~G~-l~~~~~~~~~~~~~~~~~~~~vv~Dp~~ 106 (258)
T 1ub0_A 72 HAAKTGA-LGDAAIVEAVAEAVRRFGVRPLVVDPVM 106 (258)
T ss_dssp SEEEECC-CCSHHHHHHHHHHHHHTTCCSEEECCCC
T ss_pred CEEEECC-cCCHHHHHHHHHHHHhCCCCcEEECCee
Confidence 7888875 335677888889999998 899999975
No 59
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=82.93 E-value=1.3 Score=35.59 Aligned_cols=55 Identities=22% Similarity=0.149 Sum_probs=36.8
Q ss_pred cCCcCCCCCcccCc--hhhhCCccEEEEe-cccCC--HHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 151 CLSNAVKIQADELI--AEDVKGSKWLVLR-FGMFN--FEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 151 ~~ga~~~l~~~~i~--~~~l~~~~~v~~~-~~~~~--~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
..|+++.+. ++.+ .+.+..++++++. +...+ .+.+.++++.+++.|+++++||..
T Consensus 38 ~~Ga~p~m~-~~~~e~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g 97 (272)
T 1ekq_A 38 ALGASPVMA-YAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVG 97 (272)
T ss_dssp HHTCEEECC-CCTTTHHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred HcCCchhhc-CCHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCC
Confidence 345554444 2222 3456678999997 44311 356777888889999999999974
No 60
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=82.32 E-value=2.1 Score=34.58 Aligned_cols=53 Identities=19% Similarity=0.118 Sum_probs=37.0
Q ss_pred CcCCCCCc--ccCchhhhCCccEEEEe-cccCC--HHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 153 SNAVKIQA--DELIAEDVKGSKWLVLR-FGMFN--FEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 153 ga~~~l~~--~~i~~~~l~~~~~v~~~-~~~~~--~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
|+.+-+.. +++ .+..+.++.+++. +.+.+ .+.+..+++.+++.++++++||-.
T Consensus 40 GasP~M~~~~~e~-~e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg 97 (273)
T 3dzv_A 40 DAKPIMADDPREF-PQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVG 97 (273)
T ss_dssp TCEEECCCCGGGH-HHHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCchhhcCCHHHH-HHHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhh
Confidence 65554433 222 3567889999999 55422 256677778899999999999964
No 61
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=79.01 E-value=1.3 Score=35.60 Aligned_cols=42 Identities=17% Similarity=0.135 Sum_probs=31.5
Q ss_pred hhhCCccEEEEe-cccCC--HHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 166 EDVKGSKWLVLR-FGMFN--FEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 166 ~~l~~~~~v~~~-~~~~~--~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+..+.++.+++. +.+.+ .+.+..+.+.|.+.|+|++|||-..
T Consensus 52 e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ 96 (265)
T 3hpd_A 52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGA 96 (265)
T ss_dssp HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTB
T ss_pred HHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 455678889999 55422 3566777888999999999999653
No 62
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=77.86 E-value=8 Score=32.71 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=24.1
Q ss_pred CccEEEEecccCC---HHHHHHHHHHHHH--CCCeEEEeCC
Q 028446 170 GSKWLVLRFGMFN---FEVIQAAIRIAKQ--EGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~~~~~---~~~~~~l~~~a~~--~g~~v~~D~~ 205 (209)
+.++|++...-.| ...+.++.+.|++ +|+.+++|-.
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 5678887721111 1125678888999 9999999964
No 63
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=75.53 E-value=4.4 Score=31.88 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=29.3
Q ss_pred CccEEEEecccCCHHHHHHHHHHHHHCCC-eEEEeCCC
Q 028446 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~l~~~a~~~g~-~v~~D~~~ 206 (209)
+.+.+++++ +.+.+.+..+++.+++.+. +++|||+.
T Consensus 74 ~~d~v~~G~-l~~~~~~~~~~~~~~~~~~~~vv~Dp~~ 110 (271)
T 2i5b_A 74 GVDAMKTGM-LPTVDIIELAAKTIKEKQLKNVVIDPVM 110 (271)
T ss_dssp CCSEEEECC-CCSHHHHHHHHHHHHHTTCSSEEECCCC
T ss_pred CCCEEEECC-CCCHHHHHHHHHHHHhCCCCCEEEcCCc
Confidence 678999986 3356778888999999999 59999964
No 64
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=73.08 E-value=12 Score=31.51 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=24.6
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++...-.| ...+.++.+.|+++|+.+++|-.
T Consensus 165 ~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~ 204 (414)
T 3ndn_A 165 VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNV 204 (414)
T ss_dssp SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECC
Confidence 36788887721111 11256788889999999999953
No 65
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=70.00 E-value=4 Score=32.52 Aligned_cols=41 Identities=20% Similarity=0.308 Sum_probs=30.6
Q ss_pred hhhCCccEEEEecccCCH---HHHHHHHHHHHHCCCeEEEeCCC
Q 028446 166 EDVKGSKWLVLRFGMFNF---EVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 166 ~~l~~~~~v~~~~~~~~~---~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.++.++.+++...+... +.+..+++.+++.++++++||..
T Consensus 52 ~~~~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~ 95 (265)
T 1v8a_A 52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVG 95 (265)
T ss_dssp HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred HHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCcc
Confidence 456789999999333233 35566778888999999999975
No 66
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=69.74 E-value=34 Score=28.54 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=51.9
Q ss_pred EEEec-CChhHHHHHH-HHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCc-hhhhCCccEEEE
Q 028446 100 IGAYG-DDQQGQLFVS-NMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI-AEDVKGSKWLVL 176 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~-~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~-~~~l~~~~~v~~ 176 (209)
++.+| ....|+.+.+ .|.+.++....+. .+-.+..|.. +-...+. .+...+.. .+.+.++|+|++
T Consensus 4 VaIvGAtG~vG~~llr~ll~~~~~~~v~i~---------~~~~~s~G~~-v~~~~g~--~i~~~~~~~~~~~~~~DvVf~ 71 (367)
T 1t4b_A 4 VGFIGWRGMVGSVLMQRMVEERDFDAIRPV---------FFSTSQLGQA-APSFGGT--TGTLQDAFDLEALKALDIIVT 71 (367)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTGGGGSEEE---------EEESSSTTSB-CCGGGTC--CCBCEETTCHHHHHTCSEEEE
T ss_pred EEEECCCCHHHHHHHHHHHhcCCCCeEEEE---------EEEeCCCCCC-ccccCCC--ceEEEecCChHHhcCCCEEEE
Confidence 56677 6779999999 7777654322111 1101112221 1011122 22222221 223568999998
Q ss_pred ecccCCHHHHHHHHHHHHHCCC-eEEEeCCCC
Q 028446 177 RFGMFNFEVIQAAIRIAKQEGL-SVSMDLASF 207 (209)
Q Consensus 177 ~~~~~~~~~~~~l~~~a~~~g~-~v~~D~~~~ 207 (209)
+. +.....+++..+.+.|+ .+++|.++.
T Consensus 72 a~---g~~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 72 CQ---GGDYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp CS---CHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CC---CchhHHHHHHHHHHCCCCEEEEcCChh
Confidence 73 55566777888888897 589998764
No 67
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=69.69 E-value=5.1 Score=35.55 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=38.7
Q ss_pred CcCCCCCcc--cCchhhhCC-ccEEEEe-cccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 153 SNAVKIQAD--ELIAEDVKG-SKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 153 ga~~~l~~~--~i~~~~l~~-~~~v~~~-~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
|+.+-+... ++ .++.+. ++.+++. +.+.+.+.+..+++.+++.++++++||-..
T Consensus 287 GasPiM~~~~~E~-~e~~~~~~~alvin~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~ 344 (540)
T 3nl6_A 287 GSSPIMSEIQSEV-NDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGY 344 (540)
T ss_dssp TSEEECCCCHHHH-HHHTTSTTCEEEEESSCSCCHHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCChhhcCCHHHH-HHHHhccCCeEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEChHHh
Confidence 555444332 22 345666 8999999 655457778888888999999999999653
No 68
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=67.61 E-value=28 Score=29.45 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=24.0
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|+++..-.| ...+.++.+.|+++|+.+++|-.
T Consensus 166 ~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a 205 (430)
T 3ri6_A 166 ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTT 205 (430)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECT
T ss_pred CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 35778887721111 11245778889999999999953
No 69
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=65.32 E-value=36 Score=28.20 Aligned_cols=88 Identities=16% Similarity=0.220 Sum_probs=48.8
Q ss_pred EEEec-CChhHHHHHHHHHhCCC---cccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCccEEE
Q 028446 100 IGAYG-DDQQGQLFVSNMQFSGV---DVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV 175 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~gV---d~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~~v~ 175 (209)
++.+| ....|..+++.|.++.. ++..+. .....|..+-+ .+. .+..++.+...+.++|+++
T Consensus 4 VaIvGatG~vG~el~~lL~~h~fp~~el~~~~-s~~~aG~~~~~------------~~~--~~~~~~~~~~~~~~~Dvvf 68 (344)
T 3tz6_A 4 IGIVGATGQVGQVMRTLLDERDFPASAVRFFA-SARSQGRKLAF------------RGQ--EIEVEDAETADPSGLDIAL 68 (344)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE-CTTTSSCEEEE------------TTE--EEEEEETTTSCCTTCSEEE
T ss_pred EEEECCCChHHHHHHHHHHhCCCCceEEEEEE-CcccCCCceee------------cCC--ceEEEeCCHHHhccCCEEE
Confidence 34555 45679999999998742 222221 11233333322 121 1222222222346899998
Q ss_pred EecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 176 ~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++. |.....+.+..+.+.|++ ++|.++
T Consensus 69 ~a~---~~~~s~~~a~~~~~~G~~-vID~Sa 95 (344)
T 3tz6_A 69 FSA---GSAMSKVQAPRFAAAGVT-VIDNSS 95 (344)
T ss_dssp ECS---CHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred ECC---ChHHHHHHHHHHHhCCCE-EEECCC
Confidence 873 556667777777888985 666665
No 70
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=65.25 E-value=41 Score=28.13 Aligned_cols=89 Identities=13% Similarity=0.218 Sum_probs=49.5
Q ss_pred EEEec-CChhHHHHHHHHHhCCCccccee--ecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCccEEEE
Q 028446 100 IGAYG-DDQQGQLFVSNMQFSGVDVSRLR--MKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL 176 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~gVd~~~v~--~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~~v~~ 176 (209)
++.+| ....|..+++.|.+.+.....+. ......|..+.+ .+. .+..++++...+.++|+|++
T Consensus 5 VaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~------------~~~--~~~~~~~~~~~~~~~Dvvf~ 70 (366)
T 3pwk_A 5 VAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF------------KDQ--DITIEETTETAFEGVDIALF 70 (366)
T ss_dssp EEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE------------TTE--EEEEEECCTTTTTTCSEEEE
T ss_pred EEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee------------cCC--CceEeeCCHHHhcCCCEEEE
Confidence 34555 45689999999998754321111 111122222221 121 12222233234578999998
Q ss_pred ecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 177 RFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 177 ~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+. |.....+.+..+.+.|++ ++|.++
T Consensus 71 a~---~~~~s~~~a~~~~~~G~~-vIDlSa 96 (366)
T 3pwk_A 71 SA---GSSTSAKYAPYAVKAGVV-VVDNTS 96 (366)
T ss_dssp CS---CHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred CC---ChHhHHHHHHHHHHCCCE-EEEcCC
Confidence 73 556667777777888986 566665
No 71
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=62.57 E-value=23 Score=29.25 Aligned_cols=37 Identities=8% Similarity=0.062 Sum_probs=24.1
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++.....| ...+.++.+.|+++|+.+++|-.
T Consensus 150 ~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~ 189 (392)
T 3qhx_A 150 PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNT 189 (392)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECC
Confidence 35677777621111 11256778888999999999964
No 72
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=61.37 E-value=27 Score=29.17 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=24.0
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.++|++.....| .-.+.++.+.|+++|+.+++|-.
T Consensus 151 ~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~ 190 (400)
T 3nmy_A 151 ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNT 190 (400)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECC
Confidence 35677877621111 01156778888999999999953
No 73
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=60.97 E-value=67 Score=27.19 Aligned_cols=48 Identities=17% Similarity=0.201 Sum_probs=32.7
Q ss_pred CCcccCchhhh--CCccEEEEec----ccCC---HHHHHHHHHHHHH--CCCeEEEeCC
Q 028446 158 IQADELIAEDV--KGSKWLVLRF----GMFN---FEVIQAAIRIAKQ--EGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l--~~~~~v~~~~----~~~~---~~~~~~l~~~a~~--~g~~v~~D~~ 205 (209)
++++++....- .+.++|+++. ...| .....++.+.|++ +|+.+++|-.
T Consensus 162 ~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a 220 (427)
T 3hvy_A 162 VDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNC 220 (427)
T ss_dssp CCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred cCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 45555543222 4788999985 2222 3557888899999 8999999953
No 74
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=60.42 E-value=64 Score=25.79 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=31.8
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.+++++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 138 ~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 191 (377)
T 3fdb_A 138 INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEI 191 (377)
T ss_dssp CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 44455543222456777776 21 12456788999999999999999953
No 75
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=54.06 E-value=15 Score=29.37 Aligned_cols=37 Identities=8% Similarity=-0.036 Sum_probs=27.2
Q ss_pred CccEEEEecccCC--HHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 170 GSKWLVLRFGMFN--FEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~~~--~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.|.|.+++.-.+ .+.+.++++.+++.+++++|||..
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~ 115 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVL 115 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCC
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECcee
Confidence 6888999853222 466777777776678999999975
No 76
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=53.89 E-value=54 Score=27.08 Aligned_cols=37 Identities=16% Similarity=0.097 Sum_probs=24.0
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHH-CCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQ-EGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~-~g~~v~~D~~ 205 (209)
++.++|+++..-.| .-.+.++.+.|++ +|+.++.|-.
T Consensus 146 ~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~ 186 (404)
T 1e5e_A 146 PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNT 186 (404)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECT
T ss_pred CCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECC
Confidence 35678887621111 0125677888899 9999999854
No 77
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=53.12 E-value=59 Score=26.55 Aligned_cols=48 Identities=17% Similarity=0.127 Sum_probs=28.1
Q ss_pred CCcccCchhhhCCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.++|++...-.| .....++.+.|+++|+.+++|-.
T Consensus 151 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 201 (423)
T 3lvm_A 151 IDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDAT 201 (423)
T ss_dssp CCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECT
T ss_pred cCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhh
Confidence 3444443322245677777621111 01156688889999999999964
No 78
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=52.29 E-value=70 Score=25.61 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=27.9
Q ss_pred CCccEEEEe-c-cc----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-F-GM----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~-~~----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++. . +. .|.+...++.+.|+++|+.++.|-.
T Consensus 153 ~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~ 195 (375)
T 3op7_A 153 PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEV 195 (375)
T ss_dssp TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 467788877 2 11 2566788999999999999999954
No 79
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=50.32 E-value=16 Score=29.15 Aligned_cols=37 Identities=19% Similarity=-0.032 Sum_probs=26.4
Q ss_pred CCccEEEEecccC--CHHHHHHHHHHHHHCC--CeEEEeCC
Q 028446 169 KGSKWLVLRFGMF--NFEVIQAAIRIAKQEG--LSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~--~~~~~~~l~~~a~~~g--~~v~~D~~ 205 (209)
.+.|+|++++.-. ..+.+.++++.+++++ +++++||.
T Consensus 76 ~~~d~v~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPV 116 (289)
T 3pzs_A 76 KDCDAVLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPV 116 (289)
T ss_dssp GGCCEEEECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCC
T ss_pred cCCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCc
Confidence 4788887765321 1456778888888766 89999984
No 80
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=49.99 E-value=37 Score=27.08 Aligned_cols=47 Identities=2% Similarity=0.051 Sum_probs=25.6
Q ss_pred CCcccCchhhhCCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.++|++...-.| .....++.+.|+++|+ ++.|-.
T Consensus 126 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a 175 (382)
T 4hvk_A 126 VDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDAT 175 (382)
T ss_dssp BCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECT
T ss_pred cCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhH
Confidence 3444443222235667776621111 1114577788888999 998863
No 81
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=49.97 E-value=21 Score=30.19 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=27.4
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.|+.-++..+...+...++++.|+++|++|++|...
T Consensus 69 ~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 69 TDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp EEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred ccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 445556643445677899999999999999999853
No 82
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=49.79 E-value=22 Score=30.56 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=26.3
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.++.-++..+...+...++++.|+++|++|++|..
T Consensus 69 ~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 69 TDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp SEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccccccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 33444553334567789999999999999999985
No 83
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=49.68 E-value=90 Score=25.49 Aligned_cols=88 Identities=16% Similarity=0.200 Sum_probs=47.5
Q ss_pred EEEec-CChhHHHHHHHHHhCC---CcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCccEEE
Q 028446 100 IGAYG-DDQQGQLFVSNMQFSG---VDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLV 175 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~g---Vd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~~v~ 175 (209)
++.+| ....|+.+++.|.+++ +++..+. +....+..+.+ .|.. +... .++++ .+.++|+|+
T Consensus 6 V~I~GAtG~iG~~llr~L~~~~~p~~elv~i~-s~~~~G~~~~~---~~~~-i~~~-----~~~~~-----~~~~vDvVf 70 (336)
T 2r00_A 6 VAIFGATGAVGETMLEVLQEREFPVDELFLLA-SERSEGKTYRF---NGKT-VRVQ-----NVEEF-----DWSQVHIAL 70 (336)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE-CTTTTTCEEEE---TTEE-EEEE-----EGGGC-----CGGGCSEEE
T ss_pred EEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE-CCCCCCCceee---cCce-eEEe-----cCChH-----HhcCCCEEE
Confidence 56777 7789999999988763 3333222 11122222221 1211 1110 11111 235789999
Q ss_pred EecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 176 LRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 176 ~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++. +.....+.+..+.+.|++ ++|.++
T Consensus 71 ~a~---g~~~s~~~a~~~~~~G~~-vId~s~ 97 (336)
T 2r00_A 71 FSA---GGELSAKWAPIAAEAGVV-VIDNTS 97 (336)
T ss_dssp ECS---CHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred ECC---CchHHHHHHHHHHHcCCE-EEEcCC
Confidence 873 444566777777888986 455543
No 84
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=49.45 E-value=20 Score=30.36 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=25.7
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+..+++++.|+++|++|++|..
T Consensus 58 dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 58 DFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3334453333567789999999999999999975
No 85
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=49.17 E-value=1.1e+02 Score=25.63 Aligned_cols=92 Identities=14% Similarity=0.195 Sum_probs=52.1
Q ss_pred CCeEEEEEecCChhHHHHHH-HHHhCCC---cccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccC-chhhhC
Q 028446 95 VPCGLIGAYGDDQQGQLFVS-NMQFSGV---DVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADEL-IAEDVK 169 (209)
Q Consensus 95 ~~~~~ig~vG~D~~G~~i~~-~L~~~gV---d~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i-~~~~l~ 169 (209)
.++.++|..| ..|..+++ .|.++.. +...+. .. ..|++ +..+.+. .+..++. +...+.
T Consensus 5 ~~VaIvGATG--~vG~ellr~lL~~hp~~~~~l~~~s-s~-----------~aG~~-~~~~~~~--~~~v~~~~~~~~~~ 67 (377)
T 3uw3_A 5 MNVGLVGWRG--MVGSVLMQRMQEEGDFDLIEPVFFS-TS-----------NAGGK-APSFAKN--ETTLKDATSIDDLK 67 (377)
T ss_dssp CEEEEESTTS--HHHHHHHHHHHHTTGGGGSEEEEEE-SS-----------CTTSB-CCTTCCS--CCBCEETTCHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhhCCCCceEEEEEe-ch-----------hcCCC-HHHcCCC--ceEEEeCCChhHhc
Confidence 4555555444 57999998 8888763 221111 10 11222 1112222 2333333 223457
Q ss_pred CccEEEEecccCCHHHHHHHHHHHHHCCC-eEEEeCCC
Q 028446 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~l~~~a~~~g~-~v~~D~~~ 206 (209)
++|+++++. |.....+++..+.+.|+ .+++|.++
T Consensus 68 ~vDvvf~a~---~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 68 KCDVIITCQ---GGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp TCSEEEECS---CHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCEEEECC---ChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 899999873 55666777777788898 58999876
No 86
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=49.07 E-value=1.1e+02 Score=25.03 Aligned_cols=35 Identities=23% Similarity=0.217 Sum_probs=25.4
Q ss_pred hCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 168 VKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 168 l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.++|+|+++. +.....+++..+.+.|++ ++|.++
T Consensus 66 ~~~~DvV~~a~---g~~~s~~~a~~~~~aG~k-vId~Sa 100 (340)
T 2hjs_A 66 FSSVGLAFFAA---AAEVSRAHAERARAAGCS-VIDLSG 100 (340)
T ss_dssp GGGCSEEEECS---CHHHHHHHHHHHHHTTCE-EEETTC
T ss_pred hcCCCEEEEcC---CcHHHHHHHHHHHHCCCE-EEEeCC
Confidence 45789999873 445566777888889998 567664
No 87
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=48.82 E-value=57 Score=26.74 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=22.6
Q ss_pred CccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++.....| ...+.++.+.|+++|+.+++|-.
T Consensus 150 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~ 188 (398)
T 1gc0_A 150 ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNT 188 (398)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECT
T ss_pred CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECC
Confidence 5677777621111 11256777888889999998854
No 88
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=48.59 E-value=67 Score=22.48 Aligned_cols=23 Identities=17% Similarity=0.452 Sum_probs=18.2
Q ss_pred EEEecC----ChhHHHHHHHHHhCCCc
Q 028446 100 IGAYGD----DQQGQLFVSNMQFSGVD 122 (209)
Q Consensus 100 ig~vG~----D~~G~~i~~~L~~~gVd 122 (209)
++.||- ...|..+.+.|.+.|.+
T Consensus 17 IavIGaS~~~g~~G~~~~~~L~~~G~~ 43 (138)
T 1y81_A 17 IALVGASKNPAKYGNIILKDLLSKGFE 43 (138)
T ss_dssp EEEETCCSCTTSHHHHHHHHHHHTTCE
T ss_pred EEEEeecCCCCCHHHHHHHHHHHCCCE
Confidence 566665 67899999999998874
No 89
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=48.56 E-value=20 Score=30.94 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=25.7
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+..+++++.|+++|++|++|..
T Consensus 68 dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 68 DYEAIDPQYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3444553333567789999999999999999974
No 90
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=48.35 E-value=1.2e+02 Score=25.30 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=28.8
Q ss_pred hhhCCccEEEEecccCCHHHHHHHHHHHHHCCC-eEEEeCCC
Q 028446 166 EDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGL-SVSMDLAS 206 (209)
Q Consensus 166 ~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~-~v~~D~~~ 206 (209)
..++++|+++++. |.....+++..+.+.|+ .+++|.++
T Consensus 60 ~~~~~~Dvvf~a~---~~~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 60 ESLKQLDAVITCQ---GGSYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp HHHTTCSEEEECS---CHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred hHhccCCEEEECC---ChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 3467899999873 55566777777778898 58999876
No 91
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=47.97 E-value=44 Score=28.46 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=23.9
Q ss_pred Cc-cEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GS-KWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~-~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+. ++|++...-.| ...+.++.+.|+++|+.+++|-.
T Consensus 199 ~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a 238 (445)
T 1qgn_A 199 KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGT 238 (445)
T ss_dssp SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 55 78888721111 11256778889999999999964
No 92
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=47.69 E-value=1.1e+02 Score=24.64 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=27.1
Q ss_pred CccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 161 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 202 (391)
T 3h14_A 161 DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEI 202 (391)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECc
Confidence 67777776 21 12566788999999999999999953
No 93
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=47.22 E-value=45 Score=26.97 Aligned_cols=48 Identities=10% Similarity=0.138 Sum_probs=32.5
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.+++....-++.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 156 ~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 209 (396)
T 3jtx_A 156 PDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDEC 209 (396)
T ss_dssp CCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECT
T ss_pred cCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 34455543333467888885 21 12456688899999999999999953
No 94
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=45.72 E-value=22 Score=31.84 Aligned_cols=24 Identities=13% Similarity=0.026 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 284 t~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 284 GDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHhhhcCCEEEEEec
Confidence 357789999999999999999974
No 95
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=45.55 E-value=81 Score=25.72 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=24.4
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.++|++.....| .....++.+.|+++|+.+++|-.
T Consensus 148 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~ 187 (398)
T 2rfv_A 148 PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNT 187 (398)
T ss_dssp TTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 35677887621111 01166788889999999999964
No 96
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=45.01 E-value=25 Score=29.05 Aligned_cols=33 Identities=12% Similarity=-0.016 Sum_probs=24.6
Q ss_pred CccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++|+|+++. |.....++++.+.+.|++ ++|.++
T Consensus 83 ~~DvV~~at---p~~~~~~~a~~~~~aG~~-VId~s~ 115 (354)
T 1ys4_A 83 DVDIVFSAL---PSDLAKKFEPEFAKEGKL-IFSNAS 115 (354)
T ss_dssp TCCEEEECC---CHHHHHHHHHHHHHTTCE-EEECCS
T ss_pred CCCEEEECC---CchHHHHHHHHHHHCCCE-EEECCc
Confidence 799999973 555566677777788988 677664
No 97
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=44.87 E-value=25 Score=30.08 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=25.8
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+..+++++.|+++|++|++|..
T Consensus 86 d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 86 DIYSLNENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp EEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3444443334567789999999999999999974
No 98
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=44.47 E-value=1.2e+02 Score=24.23 Aligned_cols=48 Identities=21% Similarity=0.059 Sum_probs=28.3
Q ss_pred CCcccCchhhhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-.+.+.|+..........+.++.+.|+++|+.++.|-.
T Consensus 111 ~d~~~l~~~i~~~~~~v~~~~~~G~~~~~~~i~~la~~~~~~li~D~a 158 (367)
T 3nyt_A 111 LDPQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAA 158 (367)
T ss_dssp BCGGGTGGGCCTTEEEECCBCGGGCCCCHHHHHHHHHHTTCCBEEECT
T ss_pred cCHHHHHHhcCcCCcEEEeeCCccChhhHHHHHHHHHHcCCEEEEECc
Confidence 445555432223556666542111122356778889999999999975
No 99
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=44.47 E-value=81 Score=25.75 Aligned_cols=36 Identities=14% Similarity=0.168 Sum_probs=23.3
Q ss_pred CccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++.....| ...+.++.+.|+++|+.+++|-.
T Consensus 144 ~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~ 182 (389)
T 3acz_A 144 NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDAT 182 (389)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 5677887621111 01156777888889999999964
No 100
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=44.02 E-value=22 Score=30.57 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=25.2
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+...++++.|+++|++|++|..
T Consensus 91 dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 91 DYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp EEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3334443333467789999999999999999974
No 101
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=43.53 E-value=27 Score=29.83 Aligned_cols=32 Identities=16% Similarity=0.180 Sum_probs=24.6
Q ss_pred EEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 174 LVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 174 v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.-++..+...+..+++++.|+++|++|++|..
T Consensus 87 ~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 87 FQVDPILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp EEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 33443333567789999999999999999974
No 102
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=43.51 E-value=25 Score=30.19 Aligned_cols=34 Identities=9% Similarity=0.103 Sum_probs=26.0
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+..+++++.|+++|++|++|..
T Consensus 86 dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 86 KIYDVNSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4444553344567789999999999999999974
No 103
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=42.72 E-value=1.3e+02 Score=24.05 Aligned_cols=48 Identities=19% Similarity=0.074 Sum_probs=27.6
Q ss_pred CCcccCchhhhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.++|+..........+.++.+.|+++|+.+++|-.
T Consensus 112 ~d~~~l~~~l~~~~~~v~~~n~~G~~~~l~~i~~l~~~~~~~li~D~a 159 (373)
T 3frk_A 112 IDPSLIESAITEKTKAIIAVHLYGQPADMDEIKRIAKKYNLKLIEDAA 159 (373)
T ss_dssp ECGGGTGGGCCTTEEEEEEECCTTCCCCHHHHHHHHHHHTCEEEEECT
T ss_pred cCHHHHHHhcCCCCeEEEEECCCcCcccHHHHHHHHHHcCCEEEEECC
Confidence 344444332223566666552111112245778888999999999975
No 104
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=41.56 E-value=30 Score=30.77 Aligned_cols=35 Identities=11% Similarity=0.054 Sum_probs=26.8
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.|+.-++..+...+...++++.|+++|++|++|..
T Consensus 186 ~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 186 TDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp SEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccccccCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 44445554344567789999999999999999974
No 105
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=41.36 E-value=16 Score=25.90 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=29.7
Q ss_pred CChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcc
Q 028446 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDV 123 (209)
Q Consensus 79 GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~ 123 (209)
+|.+...+..|+ ..|.++.+++.+|.. .++.|++ ||..
T Consensus 65 ~g~g~~~~~~L~-~~gv~~VI~g~iG~~-----a~~~L~~-GI~v 102 (136)
T 2re2_A 65 AARGVFMLKSAL-DHGANALVLSEIGSP-----GFNFIKN-KMDV 102 (136)
T ss_dssp SCHHHHHHHHHH-HTTCSEEEESCCBHH-----HHHHHTT-TSEE
T ss_pred CCccHHHHHHHH-HcCCCEEEECCCCHh-----HHHHHHC-CCEE
Confidence 466667888887 789999999988765 3477888 9885
No 106
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=41.26 E-value=30 Score=30.46 Aligned_cols=34 Identities=9% Similarity=0.140 Sum_probs=25.7
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+...++++.|+++|++|++|..
T Consensus 81 dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 81 NYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3444553334567789999999999999999975
No 107
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=41.09 E-value=34 Score=29.98 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=26.2
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.++.-++..+...+...++++.|+++|++|++|..
T Consensus 67 ~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 67 SDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp SEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 34444553334567789999999999999999975
No 108
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=40.79 E-value=68 Score=20.81 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEE
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMR 149 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~ 149 (209)
=+.+.+.|++.|+....-..........+.+.||+|.+--+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEI 125 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEE
Confidence 45778889999998754332222223456678999988443
No 109
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=40.61 E-value=1.1e+02 Score=22.72 Aligned_cols=25 Identities=28% Similarity=0.492 Sum_probs=20.2
Q ss_pred EEEEecCChhHHHHHHHHHhCCCcc
Q 028446 99 LIGAYGDDQQGQLFVSNMQFSGVDV 123 (209)
Q Consensus 99 ~ig~vG~D~~G~~i~~~L~~~gVd~ 123 (209)
-++.+|-...|..+...|.+.|.++
T Consensus 21 ~I~iiG~G~mG~~la~~l~~~g~~V 45 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEIAGHEV 45 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEE
Confidence 3677888889999999999888654
No 110
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=40.37 E-value=30 Score=31.29 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=26.1
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
|+.-++..+...+...++++.|+++|++|++|..
T Consensus 96 Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 96 DFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3444553344567889999999999999999974
No 111
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=40.37 E-value=30 Score=31.39 Aligned_cols=24 Identities=8% Similarity=0.368 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+...++++.|+++|++|++|..
T Consensus 310 t~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 310 TMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEecc
Confidence 357789999999999999999974
No 112
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=40.10 E-value=30 Score=31.24 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=26.0
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
|+.-++..+...+..+++++.|+++|++|++|..
T Consensus 104 dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 104 DFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444553344567899999999999999999974
No 113
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=40.08 E-value=31 Score=31.22 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=25.9
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
|+.-++..+...+..+++++.|+++|++|++|..
T Consensus 105 dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 105 DFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3444553344567889999999999999999974
No 114
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=40.07 E-value=22 Score=30.10 Aligned_cols=24 Identities=13% Similarity=0.243 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 567799999999999999999974
No 115
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=39.90 E-value=31 Score=30.23 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=26.3
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.|+.-++..+...+...++++.|+++|++|++|..
T Consensus 66 ~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 66 ANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp SEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 34444553334567789999999999999999975
No 116
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=39.78 E-value=95 Score=21.74 Aligned_cols=28 Identities=18% Similarity=0.323 Sum_probs=18.9
Q ss_pred CCeEEEEEecC-ChhHHHHHHHHHhCCCc
Q 028446 95 VPCGLIGAYGD-DQQGQLFVSNMQFSGVD 122 (209)
Q Consensus 95 ~~~~~ig~vG~-D~~G~~i~~~L~~~gVd 122 (209)
.++.++|.-.+ +..|..+.+.|++.|.+
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~ 51 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD 51 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE
Confidence 34555544332 46899999999998874
No 117
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=39.35 E-value=34 Score=30.02 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=25.7
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+...++++.|+++|++|++|..
T Consensus 67 dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 67 DYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3444553334567789999999999999999974
No 118
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=39.28 E-value=32 Score=31.06 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=25.9
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
|+.-++..+...+..+++++.|+++|++|++|..
T Consensus 100 Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 100 DFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3444553344567889999999999999999974
No 119
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=39.09 E-value=94 Score=24.43 Aligned_cols=102 Identities=5% Similarity=-0.093 Sum_probs=55.1
Q ss_pred ceEecCChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCC
Q 028446 74 IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLS 153 (209)
Q Consensus 74 ~~~~~GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~g 153 (209)
.....||..++.+...+ .+ .+ .. -.+-.+.++....+.++..|+....+... .+
T Consensus 64 v~~~~g~t~al~~~~~~-l~-~~-~~-i~~~~~~~~~~~~~~~~~~g~~~~~v~~~------------~~---------- 117 (362)
T 3ffr_A 64 VLFLASATEIWERIIQN-CV-EK-KS-FHCVNGSFSKRFYEFAGELGREAYKEEAA------------FG---------- 117 (362)
T ss_dssp EEEESCHHHHHHHHHHH-HC-SS-EE-EEEECSHHHHHHHHHHHHTTCEEEEEECC------------TT----------
T ss_pred EEEeCCchHHHHHHHHh-cc-CC-cE-EEEcCcHHHHHHHHHHHHhCCCeEEEecC------------CC----------
Confidence 55567777777777665 34 34 22 22334567755566677777654433221 10
Q ss_pred cCCCCCcccCchhhhCCccEEEEecccCC---HHHHHHHHHHHHHC-CCeEEEeCC
Q 028446 154 NAVKIQADELIAEDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQE-GLSVSMDLA 205 (209)
Q Consensus 154 a~~~l~~~~i~~~~l~~~~~v~~~~~~~~---~~~~~~l~~~a~~~-g~~v~~D~~ 205 (209)
..++++++. .-.+.++|++...-.| .-...++.+.|+++ |+.++.|-.
T Consensus 118 --~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a 169 (362)
T 3ffr_A 118 --KGFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAV 169 (362)
T ss_dssp --CCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECT
T ss_pred --CCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecc
Confidence 123334433 1235677777721111 01145677778888 999999953
No 120
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=39.01 E-value=35 Score=30.16 Aligned_cols=24 Identities=13% Similarity=0.371 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|+.|++|..
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 467789999999999999999964
No 121
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=38.60 E-value=91 Score=25.66 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=23.9
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.++|+++....| ...+.++.+.|+++|+.+++|-.
T Consensus 139 ~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~ 178 (412)
T 2cb1_A 139 AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNT 178 (412)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECG
T ss_pred cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECC
Confidence 35677887621111 01256778888999999999953
No 122
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=38.51 E-value=39 Score=29.89 Aligned_cols=24 Identities=21% Similarity=0.405 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|+.|++|..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467789999999999999999974
No 123
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=38.43 E-value=49 Score=26.21 Aligned_cols=36 Identities=8% Similarity=-0.062 Sum_probs=25.1
Q ss_pred CccEEEEecccCCHHHHHHHHHHHHH-CCCeEEEeCCC
Q 028446 170 GSKWLVLRFGMFNFEVIQAAIRIAKQ-EGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~l~~~a~~-~g~~v~~D~~~ 206 (209)
+.|.|.+++.- +.+.+..+.+..++ .+.+++|||+-
T Consensus 74 ~~daik~G~l~-s~~~i~~v~~~l~~~~~~~vv~DPv~ 110 (282)
T 3h74_A 74 HFDQALIGYVG-SVALCQQITTYLEQQTLSLLVVDPVL 110 (282)
T ss_dssp CCSEEEECCCC-SHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred ccCEEEECCCC-CHHHHHHHHHHHHHCCCCcEEEcCee
Confidence 68899998542 55555556665555 47899999953
No 124
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=37.90 E-value=1.6e+02 Score=24.50 Aligned_cols=23 Identities=13% Similarity=0.026 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
+.+...++++.|+++|+.+++|-
T Consensus 220 ~~~~l~~i~~l~~~~~~~li~De 242 (448)
T 3meb_A 220 TEAQWKELLPIMKEKKHIAFFDS 242 (448)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEec
Confidence 45667778888888888888884
No 125
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=37.68 E-value=41 Score=29.78 Aligned_cols=35 Identities=17% Similarity=0.052 Sum_probs=26.2
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.++.-++..+...+...++++.|+++|++|++|..
T Consensus 75 ~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 75 ANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp SEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccccccccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 34444553334567789999999999999999975
No 126
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=37.55 E-value=34 Score=28.76 Aligned_cols=34 Identities=12% Similarity=0.067 Sum_probs=25.6
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++..++..+.+.+..+++++.|+++|+.|++|..
T Consensus 63 ~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 63 SYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp EEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred eeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4444443333567789999999999999999974
No 127
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=37.50 E-value=61 Score=21.41 Aligned_cols=45 Identities=11% Similarity=0.114 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCC
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLS 153 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~g 153 (209)
=+.+.+.|++.|+............+..+.+.||+|.+--+....
T Consensus 79 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~ 123 (133)
T 2p7o_A 79 VDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT 123 (133)
T ss_dssp HHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred HHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence 455778888999876433221113446677789999996555443
No 128
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=37.50 E-value=38 Score=29.69 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=25.5
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.-++..+...+...++++.|+++|++|++|..
T Consensus 67 dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 67 DYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3344553333567789999999999999999974
No 129
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=37.50 E-value=1.2e+02 Score=23.66 Aligned_cols=26 Identities=19% Similarity=0.415 Sum_probs=17.6
Q ss_pred EEEec-CChhHHHHHHHHHhC-CCcccc
Q 028446 100 IGAYG-DDQQGQLFVSNMQFS-GVDVSR 125 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~-gVd~~~ 125 (209)
|+.+| ....|+.+.+.+.+. +.++..
T Consensus 3 V~V~Ga~G~mG~~i~~~~~~~~~~elva 30 (245)
T 1p9l_A 3 VGVLGAKGKVGTTMVRAVAAADDLTLSA 30 (245)
T ss_dssp EEEETTTSHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence 45666 467899888888754 655443
No 130
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=37.42 E-value=95 Score=24.53 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=19.6
Q ss_pred EEEec-CChhHHHHHHHHHhCCCcc
Q 028446 100 IGAYG-DDQQGQLFVSNMQFSGVDV 123 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~gVd~ 123 (209)
|+.|| -...|..+...|.+.|.++
T Consensus 24 I~iIGg~G~mG~~la~~l~~~G~~V 48 (298)
T 2pv7_A 24 IVIVGGYGKLGGLFARYLRASGYPI 48 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCE
T ss_pred EEEEcCCCHHHHHHHHHHHhCCCeE
Confidence 67788 8889999999998888644
No 131
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=37.37 E-value=56 Score=25.98 Aligned_cols=46 Identities=13% Similarity=0.242 Sum_probs=31.5
Q ss_pred CCcccCchhhhCCccEEEEe-cc------cCCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG------MFNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~------~~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
++++++... -.+.++|+++ .. +.+.+.+.++.+.|+++|+.+++|-
T Consensus 126 ~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~ 178 (359)
T 3pj0_A 126 LTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDG 178 (359)
T ss_dssp CCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 444444322 3467888885 21 1256778888999999999999993
No 132
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=37.35 E-value=70 Score=21.36 Aligned_cols=54 Identities=9% Similarity=-0.092 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCc
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI 164 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~ 164 (209)
=+.+.+.|++.|+....-......-...+.+.||+|.+--+..+.. .++++++.
T Consensus 79 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~--~~~~~e~~ 132 (137)
T 3itw_A 79 VDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHLR--DVPPREWG 132 (137)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC-----------
T ss_pred HHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEcC--CCCHHHHh
Confidence 3557788999998764322221123367778899999955544322 34555443
No 133
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=37.28 E-value=69 Score=25.59 Aligned_cols=105 Identities=10% Similarity=0.022 Sum_probs=57.4
Q ss_pred ceEecCChHHHHHHHHHhhcC-CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC
Q 028446 74 IKTIAGGSVTNTIRGLSVGFG-VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 74 ~~~~~GG~~~N~a~~la~rlG-~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ 152 (209)
.....||+.++.+...+ .+. .+..++.. ...+|..+...++..|.....+.. +.+
T Consensus 77 v~~~~gg~~al~~~~~~-~~~~gd~vl~~~--~~~~~~~~~~~~~~~g~~~~~~~~------------~~~--------- 132 (393)
T 3kgw_A 77 LVVSGSGHCAMETALFN-LLEPGDSFLTGT--NGIWGMRAAEIADRIGARVHQMIK------------KPG--------- 132 (393)
T ss_dssp EEESCCTTTHHHHHHHH-HCCTTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEEC------------CTT---------
T ss_pred EEEeCCcHHHHHHHHHh-cCCCCCEEEEEe--CCchhHHHHHHHHHcCCceEEEeC------------CCC---------
Confidence 34557888887766655 343 23344442 334666666777777765433221 111
Q ss_pred CcCCCCCcccCchhhhC-CccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 153 SNAVKIQADELIAEDVK-GSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 153 ga~~~l~~~~i~~~~l~-~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..++.+++....-+ +.++|++...-.| .....++.+.|+++|+.+++|-.
T Consensus 133 ---~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~ 186 (393)
T 3kgw_A 133 ---EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSV 186 (393)
T ss_dssp ---CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred ---CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECC
Confidence 12344444332222 6788887721111 01145678889999999999953
No 134
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=36.74 E-value=42 Score=26.44 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=52.9
Q ss_pred ceEecCChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCC
Q 028446 74 IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLS 153 (209)
Q Consensus 74 ~~~~~GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~g 153 (209)
.....||+.++.+...+ .+. +..++... ...+..+.+.++..|+....+.. +++
T Consensus 55 v~~t~g~t~a~~~~~~~-~~~-d~vl~~~~--~~~~~~~~~~~~~~g~~~~~v~~------------~~~---------- 108 (353)
T 2yrr_A 55 AALAGSGSLGMEAGLAN-LDR-GPVLVLVN--GAFSQRVAEMAALHGLDPEVLDF------------PPG---------- 108 (353)
T ss_dssp EEESSCHHHHHHHHHHT-CSC-CCEEEEEC--SHHHHHHHHHHHHTTCCEEEEEC------------CTT----------
T ss_pred EEEcCCcHHHHHHHHHH-hcC-CcEEEEcC--CCchHHHHHHHHHcCCceEEEeC------------CCC----------
Confidence 44556777776665544 344 43333322 23343344555666664322221 111
Q ss_pred cCCCCCcccCchhhhC-CccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 154 NAVKIQADELIAEDVK-GSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 154 a~~~l~~~~i~~~~l~-~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..++++++....-+ +.++|++...-.| .....++.+.|+++|+.+++|-.
T Consensus 109 --~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a 162 (353)
T 2yrr_A 109 --EPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAV 162 (353)
T ss_dssp --SCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECT
T ss_pred --CCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcC
Confidence 12444554322223 5778877721111 01145778888999999999964
No 135
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=36.40 E-value=82 Score=26.12 Aligned_cols=37 Identities=11% Similarity=0.087 Sum_probs=24.6
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.++|++...-.| ...+.++.+.|+++|+.+++|-.
T Consensus 143 ~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~ 182 (421)
T 2ctz_A 143 EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNT 182 (421)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECG
T ss_pred cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 35678887721111 01166788889999999999954
No 136
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=35.65 E-value=35 Score=27.74 Aligned_cols=36 Identities=25% Similarity=0.294 Sum_probs=26.4
Q ss_pred CccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.+.|++. .. +.|.+...++++.|+++|+.++.|-.
T Consensus 164 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~ 205 (385)
T 1b5p_A 164 RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEI 205 (385)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 46677775 21 12467788999999999999999953
No 137
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=35.60 E-value=35 Score=27.60 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 148 ~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 201 (389)
T 1gd9_A 148 LNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEV 201 (389)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehh
Confidence 34444432222356777775 21 12456788999999999999999943
No 138
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=35.15 E-value=1.7e+02 Score=23.39 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=31.7
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.+.|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 167 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea 220 (407)
T 3nra_A 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQL 220 (407)
T ss_dssp BCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred cCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 44455543222467777765 21 12566788999999999999999953
No 139
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=34.69 E-value=38 Score=27.39 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=27.3
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++. .. +.|.+...++.+.|+++|+.+++|-.
T Consensus 151 ~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 193 (381)
T 1v2d_A 151 PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEV 193 (381)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 356778776 11 12456788999999999999999964
No 140
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.57 E-value=66 Score=22.04 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=32.8
Q ss_pred ecCChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCC
Q 028446 77 IAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSG 120 (209)
Q Consensus 77 ~~GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~g 120 (209)
..||..-.....+. +-...+.+|+-+--+..-+.|++.+++.|
T Consensus 6 ~~~g~~~~~~~~~~-~~~~~~v~V~nLp~~~te~dl~~~F~~~g 48 (123)
T 2dha_A 6 SGGGTSNEVAQFLS-KENQVIVRMRGLPFTATAEEVVAFFGQHC 48 (123)
T ss_dssp SSCCCCHHHHHHHH-CCSCCEEEECSCCTTCCHHHHHHHHHTTS
T ss_pred CCCCCchhHHhhcc-CCCCCEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 45565555555555 45567899999998988899999999987
No 141
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=34.56 E-value=57 Score=25.70 Aligned_cols=42 Identities=14% Similarity=0.225 Sum_probs=33.8
Q ss_pred hhhhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 165 AEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 165 ~~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+....++|++.+.....+.+.+.++++.|++.|..+.+|.++
T Consensus 118 ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~ 159 (251)
T 1i4n_A 118 LASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHS 159 (251)
T ss_dssp HHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 334568999999943336678899999999999999999875
No 142
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=34.32 E-value=29 Score=27.85 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=25.2
Q ss_pred CCccEEEEecccCC---HHHHHHHHHHHHHCC------CeEEEeCC
Q 028446 169 KGSKWLVLRFGMFN---FEVIQAAIRIAKQEG------LSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g------~~v~~D~~ 205 (209)
.+.|+|.+++.- + .+.+.++++.+|+++ .++++||.
T Consensus 75 ~~~daV~tG~l~-s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPV 119 (300)
T 3zs7_A 75 SNYRYILTGYIN-NVDIIGRIRDTLKEVRELREKEDKKLTFICDPV 119 (300)
T ss_dssp GGCSEEEECCCC-CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred ccCCEEEECCCC-CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccc
Confidence 468888887642 3 355666777776655 79999995
No 143
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=33.70 E-value=2e+02 Score=23.56 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=49.7
Q ss_pred EEEec-CChhHHHHHHHHHhC-CCcccceeecCCCceeEEEEEcCCCCeeEEec---CCcCCCCCcccC-chhhh-CCcc
Q 028446 100 IGAYG-DDQQGQLFVSNMQFS-GVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC---LSNAVKIQADEL-IAEDV-KGSK 172 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~-gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~---~ga~~~l~~~~i-~~~~l-~~~~ 172 (209)
++.+| ....|..+++.|.++ .+++..+...... ...|++---.+ .+. ..+..+++ +.+.+ .++|
T Consensus 7 v~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~--------~saGk~~~~~~p~~~~~-~~~~v~~~~~~~~~~~~~D 77 (337)
T 3dr3_A 7 TLIVGASGYAGAELVTYVNRHPHMNITALTVSAQS--------NDAGKLISDLHPQLKGI-VELPLQPMSDISEFSPGVD 77 (337)
T ss_dssp EEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTC--------TTTTSBHHHHCGGGTTT-CCCBEEEESSGGGTCTTCS
T ss_pred EEEECCCChHHHHHHHHHHhCCCCcEEEEEecCch--------hhcCCchHHhCccccCc-cceeEeccCCHHHHhcCCC
Confidence 45566 456899999999874 2222222111100 01233311011 121 12333333 32234 7899
Q ss_pred EEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 173 ~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+|+++. |.....+++..+.+.|++| +|.++
T Consensus 78 vvf~a~---p~~~s~~~~~~~~~~g~~v-IDlSa 107 (337)
T 3dr3_A 78 VVFLAT---AHEVSHDLAPQFLEAGCVV-FDLSG 107 (337)
T ss_dssp EEEECS---CHHHHHHHHHHHHHTTCEE-EECSS
T ss_pred EEEECC---ChHHHHHHHHHHHHCCCEE-EEcCC
Confidence 999873 6666677888888899864 55554
No 144
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=33.52 E-value=29 Score=29.49 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
..+..+++++.|+++|++|++|.
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEE
Confidence 46778999999999999999996
No 145
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=33.19 E-value=66 Score=25.65 Aligned_cols=45 Identities=7% Similarity=0.149 Sum_probs=34.3
Q ss_pred cCchhhhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 162 ELIAEDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 162 ~i~~~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++.......+|.|++.....+.+.+.++++.+++.|..+.++.++
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~ 178 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHD 178 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 343444568999999933336677889999999999999998764
No 146
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=32.84 E-value=75 Score=25.37 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=26.9
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.+++++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 153 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 195 (376)
T 3ezs_A 153 QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195 (376)
T ss_dssp HHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred cCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEcc
Confidence 356777775 11 12566788899999999999999953
No 147
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=32.70 E-value=51 Score=26.52 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=30.9
Q ss_pred CcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 159 QADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 159 ~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.+++....-.+.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 147 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 199 (376)
T 2dou_A 147 DLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNP 199 (376)
T ss_dssp CGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 3444543222356788876 21 12456788899999999999999953
No 148
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=32.54 E-value=1.9e+02 Score=23.06 Aligned_cols=48 Identities=13% Similarity=0.067 Sum_probs=31.3
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.+++....-.+.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 151 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 204 (386)
T 1u08_A 151 VDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEV 204 (386)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECT
T ss_pred CCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEcc
Confidence 34444432222456788876 21 12456788899999999999999954
No 149
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=32.36 E-value=90 Score=21.03 Aligned_cols=44 Identities=9% Similarity=0.028 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ 152 (209)
=+.+.+.|++.|+....-.......+..+.+.||+|.+--+...
T Consensus 76 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~ 119 (145)
T 3uh9_A 76 LDHLKEVLIQNDVNILPGRERDERDQRSLYFTDPDGHKFEFHTG 119 (145)
T ss_dssp HHHHHHHHHHTTCCBCCCCCCCGGGCCEEEEECTTCCEEEEESS
T ss_pred HHHHHHHHHHCCCeEecCCccCCCCeeEEEEEcCCCCEEEEEcC
Confidence 45677889999998743322222445667788999998555543
No 150
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=32.35 E-value=36 Score=27.26 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=29.7
Q ss_pred hhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 167 ~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+++++++.++..+...+...++++.+.+.+.++++|...
T Consensus 95 ~l~~~davviGPGlg~~~~~~~~~~~~l~~~~p~VlDAda 134 (279)
T 3rpz_A 95 LEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGA 134 (279)
T ss_dssp CSSCCSEEEECTTCCCCHHHHHHHHHHTTSSSCEEECGGG
T ss_pred hccCCCEEEECCCCCCCHHHHHHHHHHHhhCCCEEEECCc
Confidence 3478999999944423345677888888889999999754
No 151
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=32.26 E-value=1e+02 Score=19.88 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=28.5
Q ss_pred EEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCee
Q 028446 100 IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRT 147 (209)
Q Consensus 100 ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt 147 (209)
++..-+| =+.+.+.|++.|+...............+.+.||+|.+-
T Consensus 85 ~~~~v~d--~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~i 130 (134)
T 3l7t_A 85 LAFYVED--VEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPL 130 (134)
T ss_dssp EEEECSC--HHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEE
T ss_pred EEEEECC--HHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEE
Confidence 3333355 345778899999987544433222345666779998874
No 152
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=32.25 E-value=49 Score=26.49 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=32.8
Q ss_pred CCCcccCchhhhC-CccEEEEe-ccc-----CCHHHHHHHHHHHHHC--CCeEEEeCC
Q 028446 157 KIQADELIAEDVK-GSKWLVLR-FGM-----FNFEVIQAAIRIAKQE--GLSVSMDLA 205 (209)
Q Consensus 157 ~l~~~~i~~~~l~-~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~--g~~v~~D~~ 205 (209)
.++++++....-+ +.++|++. ..- .+.+...++++.|+++ |+.+++|-.
T Consensus 143 ~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~ 200 (367)
T 3euc_A 143 TLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEA 200 (367)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECT
T ss_pred CCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCc
Confidence 3555555432223 67888886 211 2456788899999999 999999953
No 153
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=32.06 E-value=1.9e+02 Score=22.83 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=27.7
Q ss_pred CCcccCchhhhCCccEEEEecccCC---HHHHHHHHHHHHHCC--CeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEG--LSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g--~~v~~D~~ 205 (209)
++++++....-++.++|++.....| .-...++.+.|+++| +.+++|-.
T Consensus 127 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea 179 (384)
T 1eg5_A 127 VKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAV 179 (384)
T ss_dssp BCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred cCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhh
Confidence 3444443222235778887721111 011467778888999 99999954
No 154
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=32.00 E-value=1.3e+02 Score=21.03 Aligned_cols=27 Identities=19% Similarity=0.249 Sum_probs=18.2
Q ss_pred CeEEEEEecC-ChhHHHHHHHHHhCCCc
Q 028446 96 PCGLIGAYGD-DQQGQLFVSNMQFSGVD 122 (209)
Q Consensus 96 ~~~~ig~vG~-D~~G~~i~~~L~~~gVd 122 (209)
++.++|.-.+ ...|..+.+.|.+.|.+
T Consensus 15 ~IavIGas~~~g~~G~~~~~~L~~~G~~ 42 (145)
T 2duw_A 15 TIALVGASDKPDRPSYRVMKYLLDQGYH 42 (145)
T ss_dssp CEEEESCCSCTTSHHHHHHHHHHHHTCC
T ss_pred EEEEECcCCCCCChHHHHHHHHHHCCCE
Confidence 4455443322 56899999999988864
No 155
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=31.64 E-value=37 Score=29.08 Aligned_cols=24 Identities=29% Similarity=0.351 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 467789999999999999999974
No 156
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=31.62 E-value=37 Score=29.02 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 467789999999999999999974
No 157
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=31.47 E-value=37 Score=29.03 Aligned_cols=24 Identities=21% Similarity=0.159 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 467789999999999999999974
No 158
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=31.46 E-value=1.4e+02 Score=23.79 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=53.4
Q ss_pred ceEecCChHHHHHHHHHhhcC-CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC
Q 028446 74 IKTIAGGSVTNTIRGLSVGFG-VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 74 ~~~~~GG~~~N~a~~la~rlG-~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ 152 (209)
.....||+.++.+...+ .+. .+..++..- ...+..+...++..|.....+.. +++
T Consensus 88 v~~t~g~t~al~~~~~~-~~~~gd~Vl~~~~--~~~~~~~~~~~~~~g~~~~~v~~------------~~~--------- 143 (393)
T 1vjo_A 88 IAVSGTGTAAMEATIAN-AVEPGDVVLIGVA--GYFGNRLVDMAGRYGADVRTISK------------PWG--------- 143 (393)
T ss_dssp EEESSCHHHHHHHHHHH-HCCTTCEEEEEES--SHHHHHHHHHHHHTTCEEEEEEC------------CTT---------
T ss_pred EEEeCchHHHHHHHHHh-ccCCCCEEEEEcC--ChhHHHHHHHHHHcCCceEEEec------------CCC---------
Confidence 45566777777666554 332 233333321 22333355556666654322221 111
Q ss_pred CcCCCCCcccCchhhhC-CccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 153 SNAVKIQADELIAEDVK-GSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 153 ga~~~l~~~~i~~~~l~-~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..++++++....-+ +.++|++...-.| .....++.+.|+++|+.+++|-.
T Consensus 144 ---~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 197 (393)
T 1vjo_A 144 ---EVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTV 197 (393)
T ss_dssp ---CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred ---CCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence 12445555432223 5778877721111 01145677888889999999964
No 159
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=31.25 E-value=44 Score=24.39 Aligned_cols=20 Identities=20% Similarity=-0.122 Sum_probs=13.0
Q ss_pred HHHHHhhcCCCeEEEEEecCC
Q 028446 86 IRGLSVGFGVPCGLIGAYGDD 106 (209)
Q Consensus 86 a~~la~rlG~~~~~ig~vG~D 106 (209)
+..|. .+|.++...+.|+||
T Consensus 46 ~~~L~-~~G~~v~~~~iV~Dd 65 (178)
T 3iwt_A 46 KQLLI-ENGHKIIGYSLVPDD 65 (178)
T ss_dssp HHHHH-HTTCEEEEEEEECSC
T ss_pred HHHHH-HCCCEEEEEEEeCCC
Confidence 44454 567777777777776
No 160
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=30.93 E-value=89 Score=24.70 Aligned_cols=38 Identities=13% Similarity=0.256 Sum_probs=27.7
Q ss_pred hCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 168 VKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 168 l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+++.+++++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 142 l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 185 (361)
T 3ftb_A 142 IDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEA 185 (361)
T ss_dssp TTTCSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred ccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECc
Confidence 3337788876 21 12566788999999999999999953
No 161
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=30.86 E-value=98 Score=20.96 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEE
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMR 149 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~ 149 (209)
=+.+.+.|++.|+.+..........+..+.+.||+|.+--+
T Consensus 98 ld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel 138 (141)
T 3ghj_A 98 IEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEF 138 (141)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEE
Confidence 45577889999998763222211345677788999988433
No 162
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=30.74 E-value=36 Score=28.10 Aligned_cols=37 Identities=16% Similarity=0.059 Sum_probs=27.5
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.+.|++. .. +.+.+...++++.|+++|+.+++|-.
T Consensus 181 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~ 223 (437)
T 3g0t_A 181 GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLA 223 (437)
T ss_dssp TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcc
Confidence 467778775 21 12566788899999999999999964
No 163
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=30.36 E-value=1.9e+02 Score=22.98 Aligned_cols=105 Identities=14% Similarity=0.047 Sum_probs=53.0
Q ss_pred ceEecCChHHHHHHHHHhhcCC-CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC
Q 028446 74 IKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 74 ~~~~~GG~~~N~a~~la~rlG~-~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ 152 (209)
.....||+.++.+...+ .+.- +..++..-+ ..+....+.++..|+....+.. +++
T Consensus 72 v~~~~g~t~al~~~~~~-~~~~gd~vl~~~~~--~~~~~~~~~~~~~g~~~~~v~~------------~~~--------- 127 (396)
T 2ch1_A 72 MCVSGSAHAGMEAMLSN-LLEEGDRVLIAVNG--IWAERAVEMSERYGADVRTIEG------------PPD--------- 127 (396)
T ss_dssp EEESSCHHHHHHHHHHH-HCCTTCEEEEEESS--HHHHHHHHHHHHTTCEEEEEEC------------CTT---------
T ss_pred EEECCcHHHHHHHHHHH-hcCCCCeEEEEcCC--cccHHHHHHHHHcCCceEEecC------------CCC---------
Confidence 44556777777766655 3432 333333222 2332223455666655332221 111
Q ss_pred CcCCCCCcccCchhhhC-CccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 153 SNAVKIQADELIAEDVK-GSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 153 ga~~~l~~~~i~~~~l~-~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..++++++....-+ +.++|++...-.| .-...++.+.|+++|+.+++|-.
T Consensus 128 ---~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea 181 (396)
T 2ch1_A 128 ---RPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAV 181 (396)
T ss_dssp ---SCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred ---CCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEcc
Confidence 13445555322222 5788888621111 00145677888899999999965
No 164
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=30.20 E-value=70 Score=25.41 Aligned_cols=47 Identities=13% Similarity=0.265 Sum_probs=34.3
Q ss_pred CcccCchhhhCCccEEEEe-cccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 159 QADELIAEDVKGSKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 159 ~~~~i~~~~l~~~~~v~~~-~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
++.++.......+|.|++. ..+ +.+...++++.+++.|..++++.++
T Consensus 124 d~~qv~~A~~~GAD~VlLi~a~l-~~~~l~~l~~~a~~lGl~~lvev~t 171 (272)
T 3qja_A 124 QPYQIHEARAHGADMLLLIVAAL-EQSVLVSMLDRTESLGMTALVEVHT 171 (272)
T ss_dssp SHHHHHHHHHTTCSEEEEEGGGS-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CHHHHHHHHHcCCCEEEEecccC-CHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 3333444445689999996 444 6666888999999999999888764
No 165
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=30.15 E-value=41 Score=28.07 Aligned_cols=24 Identities=17% Similarity=0.271 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467789999999999999999974
No 166
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=30.15 E-value=58 Score=28.97 Aligned_cols=33 Identities=21% Similarity=0.155 Sum_probs=24.7
Q ss_pred EEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 173 WLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 173 ~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+..++..+...+..+++++.|+++|+.|++|..
T Consensus 182 y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 182 FYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp EEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcccCcCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 333443233467789999999999999999974
No 167
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=29.81 E-value=49 Score=27.40 Aligned_cols=37 Identities=16% Similarity=0.066 Sum_probs=27.6
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++. .. +.|.+...++++.|+++|+.++.|-.
T Consensus 205 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~ 247 (444)
T 3if2_A 205 GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNA 247 (444)
T ss_dssp TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 457778775 21 12566788999999999999999953
No 168
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=29.77 E-value=58 Score=26.08 Aligned_cols=48 Identities=17% Similarity=0.111 Sum_probs=31.7
Q ss_pred CCcccCchhhhCCccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-.+.++|++. ..- .|.+.+.++++.|+++|+.+++|-.
T Consensus 144 ~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 197 (383)
T 3kax_A 144 IDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEI 197 (383)
T ss_dssp CCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred EcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcc
Confidence 34444433222467777776 211 2457788899999999999999953
No 169
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=29.65 E-value=1e+02 Score=26.88 Aligned_cols=40 Identities=18% Similarity=0.114 Sum_probs=26.8
Q ss_pred hhhCCccEEEEecccCCHHHHHHHHH-HHHHCCCeEEEeCC
Q 028446 166 EDVKGSKWLVLRFGMFNFEVIQAAIR-IAKQEGLSVSMDLA 205 (209)
Q Consensus 166 ~~l~~~~~v~~~~~~~~~~~~~~l~~-~a~~~g~~v~~D~~ 205 (209)
+.+++++.++++..+...+...++++ .+++.++++++|+.
T Consensus 316 ~~~~~~davviGpGlg~~~~~~~~~~~~l~~~~~pvVlDad 356 (502)
T 3rss_A 316 ELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDAD 356 (502)
T ss_dssp HHHTTCSEEEECTTCCCSHHHHHHHHHHHHHCCSCEEECHH
T ss_pred HHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEeCc
Confidence 45689999999943322233444444 45677999999984
No 170
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=29.50 E-value=58 Score=26.36 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=30.5
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHH------CCCeEEEeC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQ------EGLSVSMDL 204 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~------~g~~v~~D~ 204 (209)
++++++....-.+.++|++. .. +.|.+...++++.|++ +|+.++.|-
T Consensus 160 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De 218 (398)
T 3ele_A 160 IDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADE 218 (398)
T ss_dssp CCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEC
T ss_pred CCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEec
Confidence 44444432222467888885 21 1255668888888988 899999994
No 171
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=29.02 E-value=69 Score=28.51 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=25.2
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++..++..+...+..+++++.|+++|+.|++|..
T Consensus 193 ~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 193 GLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp EEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3344443333467789999999999999999974
No 172
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=28.85 E-value=1.1e+02 Score=25.78 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=32.1
Q ss_pred CCcccCchhhhCCccEEEEec----cc---CCHHHHHHHHHHHHH--CCCeEEEeC
Q 028446 158 IQADELIAEDVKGSKWLVLRF----GM---FNFEVIQAAIRIAKQ--EGLSVSMDL 204 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~----~~---~~~~~~~~l~~~a~~--~g~~v~~D~ 204 (209)
++++++....-.+.++|++.. .. .+.+.+.++.+.|++ +|+.+++|-
T Consensus 153 ~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDe 208 (431)
T 3ht4_A 153 VDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDN 208 (431)
T ss_dssp BCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred cCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 444444332224678888873 11 235668889999999 999999994
No 173
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=28.80 E-value=62 Score=25.53 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=26.0
Q ss_pred CccEEEEe-cc------cCCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 170 GSKWLVLR-FG------MFNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 170 ~~~~v~~~-~~------~~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
+.++|++. .. +.|.+.+.++++.|+++|+.+++|-
T Consensus 132 ~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~ 173 (347)
T 1jg8_A 132 RTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDG 173 (347)
T ss_dssp CEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeeh
Confidence 46788886 21 1245667889999999999999995
No 174
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=28.67 E-value=70 Score=25.63 Aligned_cols=47 Identities=9% Similarity=0.099 Sum_probs=31.6
Q ss_pred CCcccCchhhh--CCccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDV--KGSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l--~~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++.. .+ .+.++|++. ..- .|.+.+.++.+.|+++|+.+++|-.
T Consensus 147 ~d~~~l~~-~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 201 (391)
T 3dzz_A 147 VNWADLEE-KLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEI 201 (391)
T ss_dssp CCHHHHHH-HHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred ecHHHHHH-HHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecc
Confidence 34444433 33 367777776 211 1446788999999999999999964
No 175
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=28.64 E-value=58 Score=26.35 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=27.2
Q ss_pred CccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 164 ~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 205 (399)
T 1c7n_A 164 NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEI 205 (399)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECT
T ss_pred CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 56778776 21 12467788999999999999999953
No 176
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=28.62 E-value=48 Score=28.68 Aligned_cols=24 Identities=25% Similarity=0.281 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 567789999999999999999974
No 177
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=28.58 E-value=64 Score=26.37 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=27.3
Q ss_pred CCccEEEEe-c-cc----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-F-GM----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~-~~----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++. . +. .|.+...++++.|+++|+.+++|-.
T Consensus 159 ~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 201 (411)
T 2o0r_A 159 PRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEV 201 (411)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 356778876 2 11 2456778999999999999999964
No 178
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=28.55 E-value=50 Score=27.92 Aligned_cols=24 Identities=25% Similarity=0.290 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467789999999999999999974
No 179
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=28.51 E-value=71 Score=24.13 Aligned_cols=34 Identities=6% Similarity=0.042 Sum_probs=22.8
Q ss_pred CCccEEEEe-cccCCHHHHHHHHHHHHHCCCeEEE
Q 028446 169 KGSKWLVLR-FGMFNFEVIQAAIRIAKQEGLSVSM 202 (209)
Q Consensus 169 ~~~~~v~~~-~~~~~~~~~~~l~~~a~~~g~~v~~ 202 (209)
.+.+++.++ .+..+..-+..|+..|++++.+++|
T Consensus 120 tp~s~lIVD~AekLS~kE~~~Lld~A~~~naqvvl 154 (189)
T 2l8b_A 120 TPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI 154 (189)
T ss_dssp CCCCEEEEEESSSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEechhhcCHHHHHHHHHHHHhcCCEEEE
Confidence 456677777 4332444567788888888877665
No 180
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=28.13 E-value=40 Score=28.81 Aligned_cols=24 Identities=13% Similarity=0.239 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 467789999999999999999974
No 181
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=28.00 E-value=61 Score=25.55 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=26.4
Q ss_pred CccEEEEec--c---cCCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 170 GSKWLVLRF--G---MFNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 170 ~~~~v~~~~--~---~~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
+.++|++.. + +.|.+.+.++.+.|+++|+.+++|-
T Consensus 141 ~~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~ 180 (356)
T 1v72_A 141 QPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDG 180 (356)
T ss_dssp EEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 357777772 1 1246778899999999999999994
No 182
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=27.91 E-value=1.4e+02 Score=20.00 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=26.7
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEe
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRP 150 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~ 150 (209)
=+.+.+.|++.|+....-... ...+..+.+.||+|.+--+.
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~DPdG~~iel~ 149 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVT-RPTGRGVYFYDPDGFMIEIR 149 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE-C-CCEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHCCCccccCcee-cCCccEEEEECCCCCEEEEE
Confidence 455778899999986432222 24455777889999984443
No 183
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=27.81 E-value=46 Score=28.92 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 467789999999999999999974
No 184
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=27.79 E-value=76 Score=24.97 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=26.7
Q ss_pred ccEEEEe-c----ccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 171 SKWLVLR-F----GMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 171 ~~~v~~~-~----~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.++|++. . .+.|.+...++.+.|+++|+.+++|-.
T Consensus 146 ~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~ 185 (359)
T 1svv_A 146 PKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGA 185 (359)
T ss_dssp EEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred ceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 6788876 2 112566788899999999999999964
No 185
>2lkz_A RNA-binding protein 5; RRM; NMR {Homo sapiens}
Probab=27.69 E-value=65 Score=20.88 Aligned_cols=37 Identities=5% Similarity=0.075 Sum_probs=29.7
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCC-Ccccceeec
Q 028446 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSG-VDVSRLRMK 129 (209)
Q Consensus 93 lG~~~~~ig~vG~D~~G~~i~~~L~~~g-Vd~~~v~~~ 129 (209)
-+.++.||+.+..+-.-+.|++.+++.| +....++..
T Consensus 7 ~~m~tlfV~nL~~~~tee~L~~~F~~~G~i~v~~v~i~ 44 (95)
T 2lkz_A 7 HHMDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLI 44 (95)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHSTTTCCCCGGGEECC
T ss_pred CccCEEEEeCCCCcCCHHHHHHHHHhhCCccEEEEEEE
Confidence 3578999999999988999999999998 455555543
No 186
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=27.69 E-value=58 Score=26.60 Aligned_cols=48 Identities=21% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCcccCchhhhCCccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-.+.++|++. ..- .|.+...++++.|+++|+.+++|-.
T Consensus 162 ~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 215 (422)
T 3fvs_A 162 LDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEV 215 (422)
T ss_dssp CCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEcc
Confidence 34444432222357778776 211 2456788999999999999999953
No 187
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=27.43 E-value=2.5e+02 Score=22.75 Aligned_cols=88 Identities=13% Similarity=0.175 Sum_probs=44.8
Q ss_pred EEEec-CChhHHHHHHHHHhCCCcccceeec-C-CCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchhhhCCccEEEE
Q 028446 100 IGAYG-DDQQGQLFVSNMQFSGVDVSRLRMK-R-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKWLVL 176 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~gVd~~~v~~~-~-~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~~l~~~~~v~~ 176 (209)
++.+| ....|+.+.+.|.+.+.+...+... . ...+..+.+ .|. .+-.. ..+++ . + ++|+|+.
T Consensus 3 VaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~---~g~-~i~v~-----~~~~~----~-~-~~DvV~~ 67 (331)
T 2yv3_A 3 VAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAF---RGE-EIPVE-----PLPEG----P-L-PVDLVLA 67 (331)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEE---TTE-EEEEE-----ECCSS----C-C-CCSEEEE
T ss_pred EEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEE---cCc-eEEEE-----eCChh----h-c-CCCEEEE
Confidence 45667 6779999999998655443322211 0 011111111 111 11110 01111 1 3 7899988
Q ss_pred ecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 177 RFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 177 ~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+. +.....+.+..+.+.|++ ++|.++
T Consensus 68 a~---g~~~s~~~a~~~~~~G~~-vId~s~ 93 (331)
T 2yv3_A 68 SA---GGGISRAKALVWAEGGAL-VVDNSS 93 (331)
T ss_dssp CS---HHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred CC---CccchHHHHHHHHHCCCE-EEECCC
Confidence 73 334455666777788985 555554
No 188
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=26.88 E-value=73 Score=26.37 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=27.8
Q ss_pred CCccEEEEe-c-----ccCCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 169 KGSKWLVLR-F-----GMFNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 169 ~~~~~v~~~-~-----~~~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
.+.++|++. . .+.+.+...++++.|+++|+.+++|-
T Consensus 208 ~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~De 249 (449)
T 3qgu_A 208 KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDA 249 (449)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEc
Confidence 567888885 1 11256678899999999999999995
No 189
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=26.45 E-value=60 Score=26.36 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=27.5
Q ss_pred CCccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++. ..- .+.+...++++.|+++|+.+++|-.
T Consensus 166 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 208 (410)
T 3e2y_A 166 SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEV 208 (410)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhh
Confidence 357788876 211 1456788999999999999999964
No 190
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=26.35 E-value=1.3e+02 Score=19.17 Aligned_cols=38 Identities=13% Similarity=0.209 Sum_probs=23.9
Q ss_pred HHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCee
Q 028446 110 QLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRT 147 (209)
Q Consensus 110 ~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt 147 (209)
+.+.+.|++.|+...............+.+.||+|.+-
T Consensus 85 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~i 122 (126)
T 2p25_A 85 EEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPL 122 (126)
T ss_dssp HHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEE
T ss_pred HHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEE
Confidence 34678899999987543332212224556779998874
No 191
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=26.24 E-value=1.2e+02 Score=24.46 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=26.8
Q ss_pred CCccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 169 KGSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 169 ~~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
.+.+++++. ..- .|.+...++++.|+++|+.++.|-
T Consensus 179 ~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De 220 (417)
T 3g7q_A 179 EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDN 220 (417)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeC
Confidence 356777775 211 246678899999999999999995
No 192
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=25.84 E-value=79 Score=26.00 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=27.4
Q ss_pred CCccEEEEe-c-----ccCCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 169 KGSKWLVLR-F-----GMFNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 169 ~~~~~v~~~-~-----~~~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
.+.++|++. . .+.+.+...++++.|+++|+.+++|-
T Consensus 197 ~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~De 238 (432)
T 3ei9_A 197 GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDS 238 (432)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEcc
Confidence 567888875 1 11246678899999999999999995
No 193
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=25.84 E-value=1.5e+02 Score=24.73 Aligned_cols=48 Identities=15% Similarity=0.116 Sum_probs=31.6
Q ss_pred CCcccCchhhhCCccEEEEec----ccC---CHHHHHHHHHHHHH--CCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLRF----GMF---NFEVIQAAIRIAKQ--EGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~----~~~---~~~~~~~l~~~a~~--~g~~v~~D~~ 205 (209)
++++++....-.+.++|+++. ... ....+.++.+.|++ +|+.+++|-.
T Consensus 147 ~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a 203 (409)
T 3jzl_A 147 VDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNC 203 (409)
T ss_dssp CCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred cCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCC
Confidence 444554332224678888875 221 24557788899999 9999999953
No 194
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=25.75 E-value=1.3e+02 Score=18.99 Aligned_cols=38 Identities=8% Similarity=-0.021 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEE
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMR 149 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~ 149 (209)
=+.+.+.|++.|+...... .. . +..+.+.||+|.+--+
T Consensus 74 ~~~~~~~l~~~G~~~~~p~-~~-~-~~~~~~~DPdG~~iel 111 (113)
T 1xqa_A 74 VDKINQRLKEDGFLVEPPK-HA-H-AYTFYVEAPGGFTIEV 111 (113)
T ss_dssp HHHHHHHHHHTTCCCCCCE-EC---CEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHCCCEEecCc-CC-C-cEEEEEECCCCcEEEE
Confidence 3556677999998865422 11 3 6777788999987433
No 195
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=25.61 E-value=1.1e+02 Score=24.86 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=26.7
Q ss_pred CccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++. .. +.|.+...++.+.|+++|+.+++|-.
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea 215 (409)
T 2gb3_A 174 RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEV 215 (409)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECc
Confidence 56777776 11 12456788999999999999999964
No 196
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=25.42 E-value=64 Score=26.15 Aligned_cols=48 Identities=17% Similarity=0.230 Sum_probs=30.9
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 162 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea 215 (389)
T 1o4s_A 162 PSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEV 215 (389)
T ss_dssp CCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 34444432222356777776 21 12456788999999999999999954
No 197
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=25.31 E-value=55 Score=27.36 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=27.6
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++. .. +.+.+...++++.|+++|+.++.|-.
T Consensus 200 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~ 242 (447)
T 3b46_A 200 SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEV 242 (447)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEecc
Confidence 356788876 21 12457788999999999999999953
No 198
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=25.14 E-value=77 Score=28.47 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=25.4
Q ss_pred cEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 172 KWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 172 ~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
|+.-++..+...+...++++.|+++|+.|++|..
T Consensus 149 dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V 182 (655)
T 3ucq_A 149 DYRAVRPDLGTMDDLSALARALRGRGISLVLDLV 182 (655)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcCccCccCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 3343443333567789999999999999999974
No 199
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=25.02 E-value=79 Score=26.10 Aligned_cols=92 Identities=9% Similarity=0.009 Sum_probs=46.4
Q ss_pred EEEec-CChhHHHHHHHHHhCC------CcccceeecCCCceeEEEEEcCCCCeeEEecCC--cCCCCCcccCchhhhCC
Q 028446 100 IGAYG-DDQQGQLFVSNMQFSG------VDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLS--NAVKIQADELIAEDVKG 170 (209)
Q Consensus 100 ig~vG-~D~~G~~i~~~L~~~g------Vd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~g--a~~~l~~~~i~~~~l~~ 170 (209)
++.+| ....|+.+.+.|.+++ +++..+... ...|++--..++. ....+...+.+.+.+.+
T Consensus 12 VaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~-----------~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (352)
T 2nqt_A 12 VAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA-----------TSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGG 80 (352)
T ss_dssp EEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES-----------SCTTSBGGGTCTTCGGGTTCBCEECCHHHHTT
T ss_pred EEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC-----------CcCCCchhhhcccccccceeeeccCCHHHhcC
Confidence 56677 6789999999998764 222211110 1112220000110 00122223333344668
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
+|+|+++. +.....+++..+ +.|++ ++|.++.
T Consensus 81 ~DvVf~al---g~~~s~~~~~~~-~~G~~-vIDlSa~ 112 (352)
T 2nqt_A 81 HDAVFLAL---PHGHSAVLAQQL-SPETL-IIDCGAD 112 (352)
T ss_dssp CSEEEECC---TTSCCHHHHHHS-CTTSE-EEECSST
T ss_pred CCEEEECC---CCcchHHHHHHH-hCCCE-EEEECCC
Confidence 99999983 112234556666 77865 6776643
No 200
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=24.92 E-value=1.4e+02 Score=19.66 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=27.9
Q ss_pred hHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEe
Q 028446 108 QGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRP 150 (209)
Q Consensus 108 ~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~ 150 (209)
.=+.+.+.|++.|+....... .+.+..+.+.||+|.+--+.
T Consensus 85 d~~~~~~~l~~~G~~~~~~~~--~~~g~~~~~~DPdG~~iel~ 125 (136)
T 2rk0_A 85 DLDVLEERLAKAGAAFTPTQE--LPFGWILAFRDADNIALEAM 125 (136)
T ss_dssp HHHHHHHHHHHHTCCBCCCEE--ETTEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCcccCccc--cCCceEEEEECCCCCEEEEE
Confidence 345677889999998653322 24457777889999995443
No 201
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=24.91 E-value=74 Score=26.03 Aligned_cols=48 Identities=19% Similarity=0.113 Sum_probs=31.8
Q ss_pred CCcccCchhhhCCccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.+++....-.+.++|++. ..- .|.+...++++.|+++|+.+++|-.
T Consensus 169 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 222 (404)
T 2o1b_A 169 PDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFA 222 (404)
T ss_dssp CCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECT
T ss_pred CCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 34455543222356788876 211 2456788899999999999999953
No 202
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=24.89 E-value=1.8e+02 Score=20.78 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=31.4
Q ss_pred CeEEEEEecCC-----hhHHHHHHHHHhCCCcccceeecCCCceeEEEEE
Q 028446 96 PCGLIGAYGDD-----QQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLV 140 (209)
Q Consensus 96 ~~~~ig~vG~D-----~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~ 140 (209)
++..++.+|.+ .....+.+.|.++||++.++.. .....++++-
T Consensus 102 ~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ist--se~~is~vv~ 149 (167)
T 2re1_A 102 TVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIST--SEIKVSVLID 149 (167)
T ss_dssp SEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEE--CSSEEEEEEE
T ss_pred CEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEc--ccCEEEEEEe
Confidence 47889999987 2346888999999999988652 3455555543
No 203
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=24.85 E-value=59 Score=26.86 Aligned_cols=36 Identities=8% Similarity=0.103 Sum_probs=26.4
Q ss_pred CccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++. .. +.+.+...++++.|+++|+.+++|-.
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea 232 (435)
T 3piu_A 191 RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEI 232 (435)
T ss_dssp CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 56777766 21 12456788999999999999999953
No 204
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=24.48 E-value=69 Score=20.62 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=22.5
Q ss_pred hhhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 166 EDVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 166 ~~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++++|+|+... |......+++.+.+.|++. +|++
T Consensus 65 ~~~~~~d~vi~~~---~~~~~~~~~~~~~~~g~~~-~~~~ 100 (118)
T 3ic5_A 65 KALGGFDAVISAA---PFFLTPIIAKAAKAAGAHY-FDLT 100 (118)
T ss_dssp HHTTTCSEEEECS---CGGGHHHHHHHHHHTTCEE-ECCC
T ss_pred HHHcCCCEEEECC---CchhhHHHHHHHHHhCCCE-EEec
Confidence 3456788877763 2223456777778888764 4554
No 205
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=24.47 E-value=72 Score=25.22 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=28.2
Q ss_pred CCcccCchhhh--CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDV--KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l--~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....- .+.++|++. .. +.|.+.+.++++.| ++|+.+++|-.
T Consensus 127 ~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~ 181 (354)
T 3ly1_A 127 FDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEA 181 (354)
T ss_dssp CCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECT
T ss_pred CCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEecc
Confidence 44555533222 467888875 11 12456667777776 68889988853
No 206
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.45 E-value=93 Score=23.72 Aligned_cols=46 Identities=7% Similarity=-0.013 Sum_probs=32.3
Q ss_pred CChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCccccee
Q 028446 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127 (209)
Q Consensus 79 GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~ 127 (209)
||-|..++..|+ +.|.++.+++. +....+.+.+.+++.|-+...+.
T Consensus 17 ~GIG~aia~~l~-~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~ 62 (252)
T 3h7a_A 17 DYIGAEIAKKFA-AEGFTVFAGRR--NGEKLAPLVAEIEAAGGRIVARS 62 (252)
T ss_dssp SHHHHHHHHHHH-HTTCEEEEEES--SGGGGHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHHHhcCCeEEEEE
Confidence 455778888888 78998877665 22346777888888776655444
No 207
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=24.42 E-value=95 Score=27.70 Aligned_cols=24 Identities=33% Similarity=0.375 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|+.|++|..
T Consensus 201 ~~~~~~~lv~~~H~~Gi~VilD~V 224 (618)
T 3m07_A 201 TPDDFKAFIDAAHGYGLSVVLDIV 224 (618)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeec
Confidence 457789999999999999999974
No 208
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=24.42 E-value=1.1e+02 Score=19.76 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=23.8
Q ss_pred CCccEEEEec-cc---CC--HHHHHHHHHHHHHCCCeEEE
Q 028446 169 KGSKWLVLRF-GM---FN--FEVIQAAIRIAKQEGLSVSM 202 (209)
Q Consensus 169 ~~~~~v~~~~-~~---~~--~~~~~~l~~~a~~~g~~v~~ 202 (209)
.+.+.|.++. .+ .+ ..+...+.+.++++|..+.+
T Consensus 42 ~~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l 81 (99)
T 3oiz_A 42 EALDRVVIDVSRAHIWDISSVQALDMAVLKFRREGAEVRI 81 (99)
T ss_dssp SCCSEEEEEEEEEEECSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCCCccCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4677888882 22 11 45677788889999988776
No 209
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=24.40 E-value=2.6e+02 Score=22.00 Aligned_cols=105 Identities=10% Similarity=0.111 Sum_probs=55.3
Q ss_pred ceEecCChHHHHHHHHHhhcCC-CeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecC
Q 028446 74 IKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 74 ~~~~~GG~~~N~a~~la~rlG~-~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ 152 (209)
.....||..+|.+...+ .+.- +..++..- ...+..+.+.++..|.....+.. +++
T Consensus 74 v~~~~g~t~a~~~~~~~-l~~~gd~vl~~~~--~~~~~~~~~~~~~~g~~~~~v~~------------~~~--------- 129 (386)
T 2dr1_A 74 LLVPSSGTGIMEASIRN-GVSKGGKVLVTII--GAFGKRYKEVVESNGRKAVVLEY------------EPG--------- 129 (386)
T ss_dssp EEESSCHHHHHHHHHHH-HSCTTCEEEEEES--SHHHHHHHHHHHHTTCEEEEEEC------------CTT---------
T ss_pred EEEeCChHHHHHHHHHH-hhcCCCeEEEEcC--CchhHHHHHHHHHhCCceEEEec------------CCC---------
Confidence 44567777777766654 3432 33333322 23343355666666654322211 111
Q ss_pred CcCCCCCcccCchhh--hCCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 153 SNAVKIQADELIAED--VKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 153 ga~~~l~~~~i~~~~--l~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..++++++.... -.+.++|++...-.| ...+.++.+.|+++|+.+++|-.
T Consensus 130 ---~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a 184 (386)
T 2dr1_A 130 ---KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAV 184 (386)
T ss_dssp ---CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred ---CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEcc
Confidence 124455553322 146788888721111 11257788889999999999964
No 210
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=24.32 E-value=61 Score=26.22 Aligned_cols=20 Identities=25% Similarity=0.200 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhcCCCeEEEEE
Q 028446 82 VTNTIRGLSVGFGVPCGLIGA 102 (209)
Q Consensus 82 ~~N~a~~la~rlG~~~~~ig~ 102 (209)
+.|.|.+|| ++|.+|.++.+
T Consensus 65 avNLA~aLA-~~GkkVllID~ 84 (314)
T 3fwy_A 65 SSNLSAAFS-ILGKRVLQIGC 84 (314)
T ss_dssp HHHHHHHHH-HTTCCEEEEEE
T ss_pred HHHHHHHHH-HCCCeEEEEec
Confidence 589999999 89999988765
No 211
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=24.15 E-value=70 Score=25.73 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=30.4
Q ss_pred CCcccCchhhhCCccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
++++++....-++.++|++. ..- .|.+...++.+.|+++|+.+++|-
T Consensus 151 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 203 (388)
T 1j32_A 151 VSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDE 203 (388)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 34444432222356777766 211 245678899999999999999994
No 212
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=24.13 E-value=2.6e+02 Score=21.97 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=17.8
Q ss_pred ccEEEEecccCCHHHHHHHHHHHHHCCCeEEEe
Q 028446 171 SKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMD 203 (209)
Q Consensus 171 ~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D 203 (209)
...++++....|.+ -.+++.|+++|++.+.|
T Consensus 213 ~~~~V~DlvY~P~~--T~ll~~A~~~G~~~~~~ 243 (281)
T 3o8q_A 213 SRSVCYDMMYGKGY--TVFNQWARQHGCAQAID 243 (281)
T ss_dssp EEEEEEESCCCSSC--CHHHHHHHHTTCSEEEC
T ss_pred cCCEEEEecCCCcc--CHHHHHHHHCCCCEEEC
Confidence 34566672212432 23678899999874443
No 213
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=24.12 E-value=1.9e+02 Score=22.84 Aligned_cols=48 Identities=8% Similarity=-0.001 Sum_probs=28.1
Q ss_pred CCcccCchhhhC-CccEEEEecccCC---HHHHHHHHHHHHHC--CCeEEEeCC
Q 028446 158 IQADELIAEDVK-GSKWLVLRFGMFN---FEVIQAAIRIAKQE--GLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~-~~~~v~~~~~~~~---~~~~~~l~~~a~~~--g~~v~~D~~ 205 (209)
++++++....-+ +.++|++...-.| ...+.++.+.|+++ |+.++.|-.
T Consensus 124 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a 177 (385)
T 2bkw_A 124 VPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAV 177 (385)
T ss_dssp CCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECc
Confidence 444554322212 5778888721111 01145778888898 999999964
No 214
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=24.08 E-value=74 Score=28.37 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHCC--C--eEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEG--L--SVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g--~--~v~~D~~ 205 (209)
..+..+++++.|+++| + .|++|..
T Consensus 237 t~~dfk~LV~~~H~~G~~I~~~VIlD~V 264 (637)
T 1ji1_A 237 DNSTLQTLINDIHSTANGPKGYLILDGV 264 (637)
T ss_dssp CHHHHHHHHHHHHCSSSSSCCEEEEEEC
T ss_pred CHHHHHHHHHHHHhCCCCccceEEEEEC
Confidence 4677899999999999 9 9999974
No 215
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=24.01 E-value=70 Score=26.27 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=31.5
Q ss_pred CCcccCchhhhCCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.+++....-.+.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 170 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 223 (429)
T 1yiz_A 170 LDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEV 223 (429)
T ss_dssp CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred cCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 34444432221456778876 21 12466788999999999999999954
No 216
>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}
Probab=24.00 E-value=1.7e+02 Score=19.77 Aligned_cols=43 Identities=12% Similarity=0.017 Sum_probs=27.1
Q ss_pred hHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEe
Q 028446 108 QGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRP 150 (209)
Q Consensus 108 ~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~ 150 (209)
.=+.+.+.|++.|+....-......-...+.+.||+|.+--+.
T Consensus 82 dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~ 124 (150)
T 3bqx_A 82 EVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIA 124 (150)
T ss_dssp GHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEE
Confidence 3456778899999876432222111236667789999995444
No 217
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=24.00 E-value=61 Score=27.29 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 467789999999999999999974
No 218
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=23.92 E-value=1.6e+02 Score=20.09 Aligned_cols=39 Identities=15% Similarity=0.014 Sum_probs=26.8
Q ss_pred HHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEE
Q 028446 110 QLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMR 149 (209)
Q Consensus 110 ~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~ 149 (209)
+...+.|++.|+....-... .+.+..+.+.||+|.+--+
T Consensus 110 da~~~~l~~~Gv~~~~~p~~-~~~g~~~~f~DPdGn~iel 148 (155)
T 4g6x_A 110 AAEYERLSALGVRFTQEPTD-MGPVVTAILDDTCGNLIQL 148 (155)
T ss_dssp HHHHHHHHHTTCCEEEEEEE-CSSCEEEEEECSSSCEEEE
T ss_pred hhhhhHHhcCCcEEeeCCEE-cCCeEEEEEECCCCCEEEE
Confidence 45778899999986433322 3456667788999998443
No 219
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=23.49 E-value=77 Score=26.03 Aligned_cols=48 Identities=15% Similarity=0.187 Sum_probs=32.0
Q ss_pred CCcccCchhhh-CCccEEEEeccc------CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDV-KGSKWLVLRFGM------FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l-~~~~~v~~~~~~------~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++.+++....- .+.++|++...- .+.+.+.++.+.|+++|+.+++|-.
T Consensus 181 ~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~ 235 (421)
T 3l8a_A 181 IDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEI 235 (421)
T ss_dssp CCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred eCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 34445533222 467888777211 1356688999999999999999964
No 220
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=23.49 E-value=79 Score=25.55 Aligned_cols=36 Identities=6% Similarity=-0.035 Sum_probs=27.5
Q ss_pred CCccEEEEeccc---C----CHHHHHHHHHHHHHCCCeEEEeC
Q 028446 169 KGSKWLVLRFGM---F----NFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 169 ~~~~~v~~~~~~---~----~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
.+.++|++.... . +.+...++.+.|+++|+.+++|-
T Consensus 182 ~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De 224 (406)
T 4adb_A 182 DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDE 224 (406)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 467788887221 1 55678899999999999999994
No 221
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=23.46 E-value=1.4e+02 Score=24.16 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=27.4
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|+++ .. +.|.+...++++.|+++|+.+++|-.
T Consensus 162 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 204 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAA 204 (400)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEch
Confidence 467788886 21 12466788899999999999999953
No 222
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=23.43 E-value=1.8e+02 Score=24.39 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=32.3
Q ss_pred CCcccCchhhh--CCccEEEEec----ccCC---HHHHHHHHHHHHH--CCCeEEEeCC
Q 028446 158 IQADELIAEDV--KGSKWLVLRF----GMFN---FEVIQAAIRIAKQ--EGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l--~~~~~v~~~~----~~~~---~~~~~~l~~~a~~--~g~~v~~D~~ 205 (209)
++++++....- .+.++|+++. ...| ...+.++.+.|++ +|+.+++|-.
T Consensus 162 ~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 162 PNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp CCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred cCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 44555543222 4678999885 2222 4557888899999 9999999953
No 223
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=23.41 E-value=2.4e+02 Score=21.17 Aligned_cols=25 Identities=16% Similarity=0.457 Sum_probs=18.6
Q ss_pred EEEecCChhHHHHHHHHHhCCCccc
Q 028446 100 IGAYGDDQQGQLFVSNMQFSGVDVS 124 (209)
Q Consensus 100 ig~vG~D~~G~~i~~~L~~~gVd~~ 124 (209)
+|.+|-...|+.+.+.|.+.|+++.
T Consensus 3 vgiIG~G~mG~~~~~~l~~~g~~lv 27 (236)
T 2dc1_A 3 VGLIGYGAIGKFLAEWLERNGFEIA 27 (236)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCHHHHHHHHHHhcCCCEEE
Confidence 4566667799999888887776653
No 224
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=23.36 E-value=64 Score=26.52 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=20.2
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
..+.+..+++.|++.|..|.++|
T Consensus 95 ~~~~v~~~~~~Ak~~GL~V~l~p 117 (343)
T 3civ_A 95 SDDEIASMAELAHALGLKVCLKP 117 (343)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEE
Confidence 36778999999999999999976
No 225
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=23.08 E-value=3e+02 Score=22.35 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=24.1
Q ss_pred hCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 168 VKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 168 l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.++|+|+++. +.....++++.+.+.|++ ++|.++
T Consensus 66 ~~~vDvV~~a~---g~~~s~~~a~~~~~aG~~-VId~Sa 100 (345)
T 2ozp_A 66 LEPADILVLAL---PHGVFAREFDRYSALAPV-LVDLSA 100 (345)
T ss_dssp CCCCSEEEECC---CTTHHHHTHHHHHTTCSE-EEECSS
T ss_pred hcCCCEEEEcC---CcHHHHHHHHHHHHCCCE-EEEcCc
Confidence 46899999983 323455667777788987 666655
No 226
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=23.04 E-value=1.1e+02 Score=23.66 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=31.5
Q ss_pred CChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCccccee
Q 028446 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127 (209)
Q Consensus 79 GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~ 127 (209)
||-|..++..|+ +.|.++.+++. +....+.+.+.+++.+-....+.
T Consensus 42 ~GIG~aia~~la-~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~ 87 (276)
T 3r1i_A 42 TGIGKKVALAYA-EAGAQVAVAAR--HSDALQVVADEIAGVGGKALPIR 87 (276)
T ss_dssp SHHHHHHHHHHH-HTTCEEEEEES--SGGGGHHHHHHHHHTTCCCEEEE
T ss_pred CHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHHHhcCCeEEEEE
Confidence 345677888888 78998887765 33456777888888776554443
No 227
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=23.03 E-value=2.1e+02 Score=23.27 Aligned_cols=36 Identities=17% Similarity=0.055 Sum_probs=26.1
Q ss_pred hhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 167 ~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+.++|+|+++. |.....+++..+.+.|++ ++|.++
T Consensus 74 ~~~~vDvVf~at---p~~~s~~~a~~~~~aG~~-VId~s~ 109 (350)
T 2ep5_A 74 DHKDVDVVLSAL---PNELAESIELELVKNGKI-VVSNAS 109 (350)
T ss_dssp GGTTCSEEEECC---CHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred HhcCCCEEEECC---ChHHHHHHHHHHHHCCCE-EEECCc
Confidence 346899999873 555667788888889998 556553
No 228
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=22.99 E-value=1.5e+02 Score=18.66 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=28.2
Q ss_pred CCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.++..|++.... +++....+...|+++++++++-++
T Consensus 26 gkaklViiA~D~-~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 26 GSVKEVVVAKDA-DPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp TCEEEEEEETTS-CHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CCeeEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEECC
Confidence 368888888655 557777888889999999988654
No 229
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=22.88 E-value=92 Score=28.63 Aligned_cols=24 Identities=29% Similarity=0.307 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|+.|++|..
T Consensus 249 t~~df~~lv~~~H~~Gi~VilD~V 272 (755)
T 3aml_A 249 TPEDLKYLVDKAHSLGLRVLMDVV 272 (755)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 457789999999999999999974
No 230
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=22.75 E-value=56 Score=29.06 Aligned_cols=24 Identities=17% Similarity=0.206 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|++|++|..
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467789999999999999999974
No 231
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=22.74 E-value=90 Score=27.34 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..+..+++++.|+++|+.|++|..
T Consensus 166 t~~d~~~lv~~~h~~Gi~VilD~V 189 (558)
T 3vgf_A 166 GPEGFRKLVDEAHKKGLGVILDVV 189 (558)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEe
Confidence 457789999999999999999974
No 232
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=22.66 E-value=77 Score=27.06 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=25.8
Q ss_pred CccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeC
Q 028446 170 GSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 170 ~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
+.+.|++. .. ..+.+...++++.|+++|+.++.|-
T Consensus 237 ~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~De 277 (500)
T 3tcm_A 237 NVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADE 277 (500)
T ss_dssp EEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 46677765 21 1256778899999999999999994
No 233
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=22.58 E-value=1e+02 Score=24.05 Aligned_cols=46 Identities=9% Similarity=0.007 Sum_probs=32.7
Q ss_pred ChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceee
Q 028446 80 GSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128 (209)
Q Consensus 80 G~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~ 128 (209)
|-|.-+|..++ +.|.++.+++. +.+..+.+.+++++.|.+...+..
T Consensus 18 GIG~aiA~~la-~~Ga~Vv~~~~--~~~~~~~~~~~i~~~g~~~~~~~~ 63 (254)
T 4fn4_A 18 GIGRAIAKKFA-LNDSIVVAVEL--LEDRLNQIVQELRGMGKEVLGVKA 63 (254)
T ss_dssp HHHHHHHHHHH-HTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHH-HcCCEEEEEEC--CHHHHHHHHHHHHhcCCcEEEEEc
Confidence 44566778888 78999877654 234567888899998877665543
No 234
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=22.57 E-value=1.3e+02 Score=23.24 Aligned_cols=45 Identities=11% Similarity=0.061 Sum_probs=30.8
Q ss_pred CChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCccccee
Q 028446 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127 (209)
Q Consensus 79 GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~ 127 (209)
||-|..+|..|+ +.|.++.+++ .+...+...+.+++.+-....+.
T Consensus 41 ~GIG~aia~~la-~~G~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
T 3uf0_A 41 SGIGRAIAHGYA-RAGAHVLAWG---RTDGVKEVADEIADGGGSAEAVV 85 (273)
T ss_dssp SHHHHHHHHHHH-HTTCEEEEEE---SSTHHHHHHHHHHTTTCEEEEEE
T ss_pred cHHHHHHHHHHH-HCCCEEEEEc---CHHHHHHHHHHHHhcCCcEEEEE
Confidence 344667888888 7899887766 44456667777877776554444
No 235
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=22.26 E-value=62 Score=26.12 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=26.1
Q ss_pred CccEEEEe-ccc-----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLR-FGM-----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~-~~~-----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++. ..- .|.+...++++.|+++|+.+++|-.
T Consensus 162 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 203 (390)
T 1d2f_A 162 ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEI 203 (390)
T ss_dssp TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 56777775 211 1345678899999999999999954
No 236
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=22.11 E-value=67 Score=21.26 Aligned_cols=22 Identities=18% Similarity=0.228 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHCCCeEEEeC
Q 028446 183 FEVIQAAIRIAKQEGLSVSMDL 204 (209)
Q Consensus 183 ~~~~~~l~~~a~~~g~~v~~D~ 204 (209)
...+.++.+.|+++|++|+=|+
T Consensus 26 ~~~A~~I~e~A~e~gVPi~e~~ 47 (93)
T 2vt1_B 26 NQCALAVRKYANEVGIPTVRDV 47 (93)
T ss_dssp HHHHHHHHHHHHHTTCCEEECH
T ss_pred cHHHHHHHHHHHHcCCCEEECH
Confidence 4678889999999999998775
No 237
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=22.04 E-value=2e+02 Score=19.89 Aligned_cols=49 Identities=14% Similarity=0.011 Sum_probs=29.6
Q ss_pred EEEecCChhHHHHHHHHHhCCCcccceeecCCCce-eEEEEEcCCCCeeEEec
Q 028446 100 IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTG-QCVCLVDASGNRTMRPC 151 (209)
Q Consensus 100 ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~-~~~i~~~~~G~rt~~~~ 151 (209)
++..-+| =+.+.+.|++.|+.+..-... .+.+ ..+.+.||+|.+-.+..
T Consensus 94 l~~~v~d--vd~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~~ 143 (164)
T 3m2o_A 94 LNFEVDD--PDREYARLQQAGLPILLTLRD-EDFGQRHFITADPNGVLIDIIK 143 (164)
T ss_dssp EEEECSC--HHHHHHHHHHTTCCCSEEEEE-C---CEEEEEECTTCCEEEEEC
T ss_pred EEEEECC--HHHHHHHHHHCCCceecCccc-cCCCcEEEEEECCCCCEEEEEE
Confidence 3333355 456778899999887432222 2333 56678899999955543
No 238
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=21.98 E-value=1.8e+02 Score=19.30 Aligned_cols=42 Identities=12% Similarity=-0.056 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEe
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRP 150 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~ 150 (209)
=+.+.+.|++.|+.+..-.......+..+.+.||+|.+--+.
T Consensus 89 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~ 130 (141)
T 2rbb_A 89 VDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRIN 130 (141)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEE
Confidence 456778899999875322222112356677889999985443
No 239
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=21.94 E-value=1.1e+02 Score=22.96 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=31.6
Q ss_pred CChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCccccee
Q 028446 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127 (209)
Q Consensus 79 GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~ 127 (209)
||-|..++..|+ +.|.++.+++. +....+.+.+.+++.+.+...+.
T Consensus 15 ~gIG~~~a~~l~-~~G~~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 15 RGIGFEVAHALA-SKGATVVGTAT--SQASAEKFENSMKEKGFKARGLV 60 (247)
T ss_dssp SHHHHHHHHHHH-HTTCEEEEEES--SHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ChHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHHHhcCCceEEEE
Confidence 455778888888 78988766554 22345677788888776655444
No 240
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=21.74 E-value=90 Score=27.39 Aligned_cols=36 Identities=8% Similarity=0.011 Sum_probs=25.1
Q ss_pred CccEEEEecccCC--HHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 170 GSKWLVLRFGMFN--FEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 170 ~~~~v~~~~~~~~--~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
+.|.|.+++. .+ .+.+.++++.+++.+.++++||.-
T Consensus 91 ~~daIkiG~l-s~~~i~~v~~~l~~~~~~~~~vVlDPvm 128 (550)
T 3rm5_A 91 KCNVIKTGML-TAAAIEVLHEKLLQLGENRPKLVVDPVL 128 (550)
T ss_dssp CCSEEEECSC-CHHHHHHHHHHHHHHGGGSCEEEECCCC
T ss_pred CCCEEEECCC-CHHHHHHHHHHHHHhcccCCCEEEecce
Confidence 7899999854 22 344555666565568999999963
No 241
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=21.69 E-value=1.2e+02 Score=22.93 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=30.2
Q ss_pred CCccEEEEecc--cCCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 169 KGSKWLVLRFG--MFNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 169 ~~~~~v~~~~~--~~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
..+|+|++.-. -.|.+...++++.+++.|..++++.++.
T Consensus 81 ~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~ 121 (219)
T 2h6r_A 81 CGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNI 121 (219)
T ss_dssp HTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred cCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 47999999732 1266668889999999999999988763
No 242
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=21.63 E-value=96 Score=28.45 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=21.7
Q ss_pred CHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 182 NFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 182 ~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
..+...++++.|+++|+.|++|...
T Consensus 64 t~edfk~LV~aaH~~GIkVIlDvV~ 88 (720)
T 1iv8_A 64 GEKEYRRLIETAHTIGLGIIQDIVP 88 (720)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4677899999999999999999753
No 243
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=21.61 E-value=26 Score=23.63 Aligned_cols=39 Identities=21% Similarity=0.335 Sum_probs=28.5
Q ss_pred CChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcc
Q 028446 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDV 123 (209)
Q Consensus 79 GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~ 123 (209)
+|.+...+..++ ..|.++.+++.+|.. ..+.|++.||..
T Consensus 48 ~g~g~~~~~~l~-~~gv~~vi~~~iG~~-----a~~~L~~~GI~v 86 (116)
T 1rdu_A 48 HGTGPKVVQSLV-SKGVEYLIASNVGRN-----AFETLKAAGVKV 86 (116)
T ss_dssp CCSSCSHHHHHH-TTTCCEEECSSCCSS-----CHHHHHTTTCEE
T ss_pred CCccHHHHHHHH-HcCCCEEEECCCCHh-----HHHHHHHCCCEE
Confidence 344446677777 689999999988876 346688888875
No 244
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=21.57 E-value=74 Score=25.91 Aligned_cols=36 Identities=22% Similarity=0.205 Sum_probs=25.1
Q ss_pred CccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++.....+...+.++.+.|+++|+.+++|-.
T Consensus 122 ~~~~v~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea 157 (394)
T 1o69_A 122 KPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAA 157 (394)
T ss_dssp CCCEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CceEEEEECCCCChhhHHHHHHHHHHcCCEEEEECc
Confidence 577888773221223356778888999999999964
No 245
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=21.55 E-value=1.3e+02 Score=24.11 Aligned_cols=102 Identities=10% Similarity=0.008 Sum_probs=53.2
Q ss_pred ecCChHHHHHHHHHhhcC-CCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcC
Q 028446 77 IAGGSVTNTIRGLSVGFG-VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNA 155 (209)
Q Consensus 77 ~~GG~~~N~a~~la~rlG-~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~ 155 (209)
..||..++.+...+ .+. .+..++.. ....+..+.+.++..|+....+.. +.+
T Consensus 70 ~~sgt~al~~~~~~-~~~~gd~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~------------~~~------------ 122 (411)
T 3nnk_A 70 DGTSRAGIEAILVS-AIRPGDKVLVPV--FGRFGHLLCEIARRCRAEVHTIEV------------PWG------------ 122 (411)
T ss_dssp ESCHHHHHHHHHHH-HCCTTCEEEEEE--CSHHHHHHHHHHHHTTCEEEEEEC------------CTT------------
T ss_pred CCCcHHHHHHHHHH-hcCCCCEEEEec--CCchHHHHHHHHHHcCCeEEEEec------------CCC------------
Confidence 34556555555544 343 23334333 234555567777777765433321 111
Q ss_pred CCCCcccCchhhhC-CccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 156 VKIQADELIAEDVK-GSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 156 ~~l~~~~i~~~~l~-~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
..++++++....-+ +.++|++...-.| .....++.+.|+++|+.+++|-.
T Consensus 123 ~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 176 (411)
T 3nnk_A 123 EVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDAT 176 (411)
T ss_dssp CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred CCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence 12344555322212 6788888731111 01145677888899999999964
No 246
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=21.35 E-value=1.7e+02 Score=18.80 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCcccceeec-CCC--ceeEEEEEcCCCCeeEEe
Q 028446 109 GQLFVSNMQFSGVDVSRLRMK-RGP--TGQCVCLVDASGNRTMRP 150 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~-~~~--T~~~~i~~~~~G~rt~~~ 150 (209)
=+.+.+.|++.|+....-... ... ....+.+.||+|.+--+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~ 128 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVS 128 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEE
Confidence 345678899999987543221 112 225677889999984443
No 247
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=21.29 E-value=67 Score=26.20 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=26.5
Q ss_pred CccEEEEec--cc----CCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLRF--GM----FNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~--~~----~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++.. +. .|.+...++++.|+++|+.+++|-.
T Consensus 174 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~ 215 (406)
T 1xi9_A 174 RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEI 215 (406)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECT
T ss_pred CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 567777762 11 2456788999999999999999953
No 248
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.27 E-value=1.3e+02 Score=22.89 Aligned_cols=47 Identities=11% Similarity=-0.031 Sum_probs=32.3
Q ss_pred cCChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCccccee
Q 028446 78 AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127 (209)
Q Consensus 78 ~GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~ 127 (209)
.||-|..++..|+ +.|.++.+++. +....+.+.+.+++.|.+...+.
T Consensus 20 s~gIG~aia~~l~-~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~ 66 (264)
T 3ucx_A 20 GPALGTTLARRCA-EQGADLVLAAR--TVERLEDVAKQVTDTGRRALSVG 66 (264)
T ss_dssp CTTHHHHHHHHHH-HTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcHHHHHHHHHHH-HCcCEEEEEeC--CHHHHHHHHHHHHhcCCcEEEEE
Confidence 3466788899998 78999877654 22345667777887776655444
No 249
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=21.09 E-value=1.3e+02 Score=27.53 Aligned_cols=24 Identities=21% Similarity=0.297 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 183 FEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 183 ~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+..+++++.|+++|+.|++|...
T Consensus 312 ~~dfk~lV~~~H~~GI~VilD~V~ 335 (722)
T 3k1d_A 312 PDDFRALVDALHQAGIGVIVDWVP 335 (722)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEEe
Confidence 577899999999999999999753
No 250
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=21.09 E-value=37 Score=23.08 Aligned_cols=39 Identities=26% Similarity=0.277 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcc
Q 028446 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDV 123 (209)
Q Consensus 79 GG~~~N~a~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~ 123 (209)
+|.+...+..|+ ..|.++.+++.+|. ...+.|++.||..
T Consensus 53 ~g~g~~~~~~l~-~~gv~~vi~~~iG~-----~a~~~L~~~GI~v 91 (120)
T 2wfb_A 53 HGAGINAAQVLA-KSGAGVLLTGYVGP-----KAFQALQAAGIKV 91 (120)
T ss_dssp SCHHHHHHHHHH-HHTEEEEECSCCCH-----HHHHHHHHTTCEE
T ss_pred CCchHHHHHHHH-HCCCCEEEECCCCH-----hHHHHHHHCCCEE
Confidence 455556666776 67888888886654 3556778888775
No 251
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=21.07 E-value=77 Score=27.91 Aligned_cols=24 Identities=13% Similarity=0.349 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 183 FEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 183 ~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+..+++++.|+++|+.|++|...
T Consensus 218 ~~df~~lv~~~H~~Gi~VilD~V~ 241 (583)
T 1ea9_C 218 KDTLKKLVDLCHERGIRVLLDAVF 241 (583)
T ss_dssp HHHHHHHHHHHTTTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 577899999999999999999753
No 252
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=21.04 E-value=1.1e+02 Score=24.23 Aligned_cols=37 Identities=19% Similarity=0.122 Sum_probs=26.8
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.+++++. .. +.|.+...++.+.|+++|+.+++|-.
T Consensus 145 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 187 (364)
T 1lc5_A 145 PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEA 187 (364)
T ss_dssp TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECc
Confidence 356777764 21 12567788899999999999999953
No 253
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=21.01 E-value=99 Score=21.81 Aligned_cols=42 Identities=10% Similarity=0.023 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhcCCCeEEEEEec--------------------CChhHHHHHHHHHhCCCccc
Q 028446 82 VTNTIRGLSVGFGVPCGLIGAYG--------------------DDQQGQLFVSNMQFSGVDVS 124 (209)
Q Consensus 82 ~~N~a~~la~rlG~~~~~ig~vG--------------------~D~~G~~i~~~L~~~gVd~~ 124 (209)
+.-.|..|+ ++|.++.++-.-. .....+.+.+.+++.||++.
T Consensus 13 Gl~~A~~l~-~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~ 74 (180)
T 2ywl_A 13 GLSAALFLA-RAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVR 74 (180)
T ss_dssp HHHHHHHHH-HTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHH-HCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 567788888 8999999987421 12456778888888998753
No 254
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=20.97 E-value=1.4e+02 Score=19.86 Aligned_cols=43 Identities=12% Similarity=0.116 Sum_probs=26.2
Q ss_pred HHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEec
Q 028446 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC 151 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~ 151 (209)
=+.+.+.|++.|+............+..+.+.||+|.+--+..
T Consensus 79 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~ 121 (139)
T 1r9c_A 79 FDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHT 121 (139)
T ss_dssp HHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEEC
T ss_pred HHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEe
Confidence 4557788899998865332111124556778899999855543
No 255
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=20.84 E-value=1.2e+02 Score=24.76 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=27.4
Q ss_pred CCccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 169 KGSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 169 ~~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
.+.++|++. .. +.|.+...++++.|+++|+.+++|-.
T Consensus 171 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 213 (412)
T 2x5d_A 171 PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLA 213 (412)
T ss_dssp SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 467788885 21 12456788899999999999999954
No 256
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=20.82 E-value=2e+02 Score=19.36 Aligned_cols=41 Identities=10% Similarity=0.087 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCCcccceeec-CCC--ceeEEEEEcCCCCeeEE
Q 028446 109 GQLFVSNMQFSGVDVSRLRMK-RGP--TGQCVCLVDASGNRTMR 149 (209)
Q Consensus 109 G~~i~~~L~~~gVd~~~v~~~-~~~--T~~~~i~~~~~G~rt~~ 149 (209)
=+.+.+.|++.|+.+..-... .+. ....+.+.||+|.+--+
T Consensus 101 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl 144 (147)
T 3zw5_A 101 LEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEV 144 (147)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEE
Confidence 355778899999987532221 122 23466788999988433
No 257
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=20.79 E-value=3.1e+02 Score=21.56 Aligned_cols=32 Identities=13% Similarity=0.064 Sum_probs=21.1
Q ss_pred CccEEEEe-cc-----cCCHHHHHHHHHHHHHCCCeEEEeCC
Q 028446 170 GSKWLVLR-FG-----MFNFEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~-~~-----~~~~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
+.++|++. .. +.|.+ +.+.|+++|+.+++|-.
T Consensus 154 ~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~ 191 (370)
T 2z61_A 154 KTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEI 191 (370)
T ss_dssp SEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECT
T ss_pred CceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcc
Confidence 56677765 21 11334 77788889999999854
No 258
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=20.63 E-value=3e+02 Score=21.27 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=21.6
Q ss_pred CccEEEEecccCC---HHHHHHHHHHHHH-CCCeEEEeCC
Q 028446 170 GSKWLVLRFGMFN---FEVIQAAIRIAKQ-EGLSVSMDLA 205 (209)
Q Consensus 170 ~~~~v~~~~~~~~---~~~~~~l~~~a~~-~g~~v~~D~~ 205 (209)
+.++|++.....| .-...++.+.|++ +|+.+++|-.
T Consensus 83 ~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a 122 (331)
T 1pff_A 83 NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNT 122 (331)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECT
T ss_pred CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECC
Confidence 4567777521101 0115667777888 8888888854
No 259
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.59 E-value=2.1e+02 Score=19.54 Aligned_cols=90 Identities=22% Similarity=0.203 Sum_probs=51.2
Q ss_pred HHHHhhcCCCeEEEEEecCChhHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCeeEEecCCcCCCCCcccCchh
Q 028446 87 RGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE 166 (209)
Q Consensus 87 ~~la~rlG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~rt~~~~~ga~~~l~~~~i~~~ 166 (209)
+-+. |.|.++.++-.=-+..--+.-++++++.|+|.+.+.-.+. | +. ...++ ++
T Consensus 20 reik-rqgvrvvllysdqdekrrrerleefekqgvdvrtvedked----------------f---re-----nirei-we 73 (162)
T 2l82_A 20 REIK-RQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKED----------------F---RE-----NIREI-WE 73 (162)
T ss_dssp HHHH-HTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHH----------------H---HH-----HHHHH-HH
T ss_pred HHHH-hCCeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHHH----------------H---HH-----HHHHH-HH
Confidence 3445 6777777765544444555666777777877643221110 0 00 00111 33
Q ss_pred hhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEe
Q 028446 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMD 203 (209)
Q Consensus 167 ~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D 203 (209)
...+-|.+++-.. ...+.+...++.|+++|+.|++=
T Consensus 74 rypqldvvvivtt-ddkewikdfieeakergvevfvv 109 (162)
T 2l82_A 74 RYPQLDVVVIVTT-DDKEWIKDFIEEAKERGVEVFVV 109 (162)
T ss_dssp HCTTCCEEEEEEC-CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred hCCCCcEEEEEec-CcHHHHHHHHHHHHhcCcEEEEE
Confidence 4456676666521 14788888999999999877653
No 260
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=20.46 E-value=1.7e+02 Score=24.49 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=26.8
Q ss_pred hhCCccEEEEecccCCHHHHHHHHHHHHHCCCeEEEeCCC
Q 028446 167 DVKGSKWLVLRFGMFNFEVIQAAIRIAKQEGLSVSMDLAS 206 (209)
Q Consensus 167 ~l~~~~~v~~~~~~~~~~~~~~l~~~a~~~g~~v~~D~~~ 206 (209)
.+.++|+++++. |.....+++..+.+.|++ ++|.++
T Consensus 90 ~~~~~Dvvf~al---p~~~s~~~~~~~~~~G~~-VIDlSa 125 (381)
T 3hsk_A 90 NFLECDVVFSGL---DADVAGDIEKSFVEAGLA-VVSNAK 125 (381)
T ss_dssp TGGGCSEEEECC---CHHHHHHHHHHHHHTTCE-EEECCS
T ss_pred hcccCCEEEECC---ChhHHHHHHHHHHhCCCE-EEEcCC
Confidence 467899999983 666677788888888987 556554
No 261
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=20.33 E-value=1.3e+02 Score=24.13 Aligned_cols=48 Identities=21% Similarity=0.140 Sum_probs=29.2
Q ss_pred CCcccCchhhhCCccEEEEecccCC---HHHHHHHHHHHHHCCCeEEEeCC
Q 028446 158 IQADELIAEDVKGSKWLVLRFGMFN---FEVIQAAIRIAKQEGLSVSMDLA 205 (209)
Q Consensus 158 l~~~~i~~~~l~~~~~v~~~~~~~~---~~~~~~l~~~a~~~g~~v~~D~~ 205 (209)
++++++....-++.++|++.....| .-...++.+.|+++|+.+++|-.
T Consensus 152 ~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~ 202 (406)
T 1kmj_A 152 LQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGA 202 (406)
T ss_dssp BCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECT
T ss_pred cCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEch
Confidence 4445543322245778888721111 01166788889999999999964
No 262
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=20.27 E-value=2e+02 Score=22.15 Aligned_cols=40 Identities=3% Similarity=0.064 Sum_probs=32.3
Q ss_pred hCCccEEEEeccc-CCHHHHHHHHHHHHHCCCeEEEeCCCC
Q 028446 168 VKGSKWLVLRFGM-FNFEVIQAAIRIAKQEGLSVSMDLASF 207 (209)
Q Consensus 168 l~~~~~v~~~~~~-~~~~~~~~l~~~a~~~g~~v~~D~~~~ 207 (209)
-..+|.+.++++. ...+.+.++++..|+..+++++-|++.
T Consensus 29 ~~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~ 69 (228)
T 3vzx_A 29 ESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAI 69 (228)
T ss_dssp TSSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEECSCG
T ss_pred HcCCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEeCCCH
Confidence 3578999999654 256778899999988999999988763
No 263
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=20.13 E-value=1.8e+02 Score=20.68 Aligned_cols=49 Identities=6% Similarity=0.055 Sum_probs=32.0
Q ss_pred CeEEEEEecCCh-----hHHHHHHHHHhCCCcccceeecCCCceeEEEEEcCCCCe
Q 028446 96 PCGLIGAYGDDQ-----QGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNR 146 (209)
Q Consensus 96 ~~~~ig~vG~D~-----~G~~i~~~L~~~gVd~~~v~~~~~~T~~~~i~~~~~G~r 146 (209)
++..++.||.+- ....+.+.|.+.||++..+.. .++..++++-..+.++
T Consensus 94 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~--Se~~is~vv~~~d~~~ 147 (167)
T 2dt9_A 94 DIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIAT--SEVRISVIIPAEYAEA 147 (167)
T ss_dssp SEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEEE--CSSEEEEEEEGGGHHH
T ss_pred CEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEEc--cCCEEEEEEeHHHHHH
Confidence 445599999862 336788899999999955542 2555666554444443
No 264
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=20.05 E-value=2e+02 Score=18.99 Aligned_cols=49 Identities=14% Similarity=-0.002 Sum_probs=29.9
Q ss_pred EEEecCChhHHHHHHHHHhCCCc-ccceeecCCCceeEEEEEcCCCCeeEEec
Q 028446 100 IGAYGDDQQGQLFVSNMQFSGVD-VSRLRMKRGPTGQCVCLVDASGNRTMRPC 151 (209)
Q Consensus 100 ig~vG~D~~G~~i~~~L~~~gVd-~~~v~~~~~~T~~~~i~~~~~G~rt~~~~ 151 (209)
++..-+| =+...+.|++.|+. ...-... .+-+..+.+.||+|.+--+..
T Consensus 70 l~f~v~d--vd~~~~~l~~~G~~~~~~~p~~-~~~G~~~~~~DPdGn~iel~~ 119 (128)
T 3g12_A 70 LGFQITD--LEKTVQELVKIPGAMCILDPTD-MPDGKKAIVLDPDGHSIELCE 119 (128)
T ss_dssp EEEEESC--HHHHHHHHTTSTTCEEEEEEEE-CC-CEEEEEECTTCCEEEEEC
T ss_pred EEEEeCC--HHHHHHHHHHCCCceeccCcee-CCCccEEEEECCCCCEEEEEE
Confidence 3333355 46677889999998 4322222 234444778899999955443
Done!