BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028449
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 321
Score = 283 bits (723), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 174/208 (83%), Gaps = 7/208 (3%)
Query: 1 MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPS---LIRNEPVFAAPAPI 57
MSTASIN+ CLT +S AQ+SL K + RP ARL++ +S S LIRNEPVFAAP PI
Sbjct: 1 MSTASINS-CLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPI 56
Query: 58 INPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVER 117
INP RE+MA +SYE+AI AL+KLL EK +L P+AAA+V+QITA+LQ+ +K FD VE
Sbjct: 57 INPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEH 116
Query: 118 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNV 177
+K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+
Sbjct: 117 MKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNI 176
Query: 178 ANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
AN+VP YD+T+Y+GVGAA+EYAVLHLKV
Sbjct: 177 ANMVPAYDKTRYSGVGAAIEYAVLHLKV 204
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1
PE=1 SV=2
Length = 347
Score = 281 bits (719), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 173/219 (78%), Gaps = 14/219 (6%)
Query: 1 MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNE 48
MSTA ++ + LTS+S +QSSL K S S VA L +S S P+LIRNE
Sbjct: 1 MSTAPLSGFFLTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNE 60
Query: 49 PVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQT--P 106
PVFAAPAPII P W E+M ++Y+EAIEALKKLL EKE+LK VAAAKVEQITA LQT
Sbjct: 61 PVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTS 120
Query: 107 SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDF 166
SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF
Sbjct: 121 SDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDF 180
Query: 167 QPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
QPG+AFVVRN+AN+VPP+D+ KY GVGAA+EYAVLHLKV
Sbjct: 181 QPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKV 219
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1
Length = 330
Score = 274 bits (701), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/168 (79%), Positives = 150/168 (89%), Gaps = 3/168 (1%)
Query: 39 ASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQ 98
A+PPSLIRNEPVFAAPAPII PNW ED N+SYEEAI+ALKK+L EK +L+PVAAA+++Q
Sbjct: 48 ATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQ 106
Query: 99 ITAQLQTPSDTKA-FDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSR 157
ITAQ P DTKA FD VERIK GF+ FK EK+ NPALY ELAKGQSPK+MVFACSDSR
Sbjct: 107 ITAQAAAP-DTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSR 165
Query: 158 VCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
VCPSHVLDFQPGEAFVVRNVAN+VPP+D+TKY+GVGAAVEYAVLHLKV
Sbjct: 166 VCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1
Length = 330
Score = 274 bits (700), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/168 (79%), Positives = 150/168 (89%), Gaps = 3/168 (1%)
Query: 39 ASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQ 98
A+PPSLIRNEPVFAAPAPII PNW ED N+SYEEAI+ALKK+L EK +L+PVAAA+++Q
Sbjct: 48 ATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQ 106
Query: 99 ITAQLQTPSDTKA-FDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSR 157
ITAQ P DTKA FD VERIK GF+ FK EK+ NPALY ELAKGQSPK+MVFACSDSR
Sbjct: 107 ITAQAAAP-DTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSR 165
Query: 158 VCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
VCPSHVLDFQPGEAFVVRNVAN+VPP+D+TKY+GVGAAVEYAVLHLKV
Sbjct: 166 VCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1
Length = 329
Score = 272 bits (696), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/168 (79%), Positives = 149/168 (88%), Gaps = 3/168 (1%)
Query: 39 ASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQ 98
A+PPSLIRNEPVFAAPAPII PNW ED N+SYEEAI+ALKK+L EK +L+PVAAA+++Q
Sbjct: 47 ATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQ 105
Query: 99 ITAQLQTPSDTKA-FDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSR 157
ITAQ P DTKA FD VERIK GF+ FK EK+ NP LY ELAKGQSPK+MVFACSDSR
Sbjct: 106 ITAQAAAP-DTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSR 164
Query: 158 VCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
VCPSHVLDFQPGEAFVVRNVAN+VPP+D+TKY+GVGAAVEYAVLHLKV
Sbjct: 165 VCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 212
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2
Length = 330
Score = 272 bits (696), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 139/201 (69%), Positives = 161/201 (80%), Gaps = 3/201 (1%)
Query: 6 INNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWRED 65
+N L S + S + S+ + + +S A+PPSLIRNEPVFAAPAPII PNW ED
Sbjct: 15 VNASSLKKASTSARSGVLSARFTCNSSSSSSSSATPPSLIRNEPVFAAPAPIITPNWTED 74
Query: 66 MANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKA-FDSVERIKEGFIH 124
N+SYEEAI+ALKK L EK +L+PVAA +++QITAQ P DTKA FD VERIK GF+
Sbjct: 75 -GNESYEEAIDALKKTLIEKGELEPVAATRIDQITAQAAAP-DTKAPFDPVERIKSGFVK 132
Query: 125 FKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 184
FK EK+ NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+
Sbjct: 133 FKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPF 192
Query: 185 DQTKYAGVGAAVEYAVLHLKV 205
D+TKY+GVGAAVEYAVLHLKV
Sbjct: 193 DKTKYSGVGAAVEYAVLHLKV 213
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 319
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/201 (68%), Positives = 164/201 (81%), Gaps = 6/201 (2%)
Query: 8 NWCLTSVSQAQSSLIKSSTLRPSIVA--RLN-SPASPPSLIRNEPVFAAPAPIINPNWRE 64
N CLTS+S +++ L +STLRP+ +A R+N S + PPSLIRN+PVFAAPAPII P +E
Sbjct: 5 NGCLTSISPSRTQLKNTSTLRPTFIANSRVNPSSSVPPSLIRNQPVFAAPAPIITPTLKE 64
Query: 65 DMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIH 124
DMA YEEAI ALKKLL EK +L+ AA+KV QIT++L A V+RIKEGFI
Sbjct: 65 DMA---YEEAIAALKKLLSEKGELENEAASKVAQITSELADGGTPSASYPVQRIKEGFIK 121
Query: 125 FKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 184
FK+EKYEKNPALY EL+KGQ+PK+MVFACSDSRVCPSHVLDFQPGEAF+VRN+AN+VP +
Sbjct: 122 FKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVF 181
Query: 185 DQTKYAGVGAAVEYAVLHLKV 205
D+ KYAGVGAA+EYAVLHLKV
Sbjct: 182 DKDKYAGVGAAIEYAVLHLKV 202
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1
Length = 328
Score = 262 bits (670), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 169/213 (79%), Gaps = 10/213 (4%)
Query: 1 MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPS-----LIRNEPVFAAPA 55
MST+SIN + L+S+S A++S K +TLRP + A LN+ +S S LI+++PVFA+ +
Sbjct: 1 MSTSSINGFSLSSLSPAKTS-TKRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSS 59
Query: 56 PIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAF--- 112
PII P RE+M + Y+EAIE L+KLL+EK +LK AA KVEQITAQL T S +
Sbjct: 60 PIITPVLREEMG-KGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTSSSDGIPKS 118
Query: 113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 172
++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 119 EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 178
Query: 173 VVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
VVRNVAN+VPPYDQ KYAG GAA+EYAVLHLKV
Sbjct: 179 VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKV 211
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2
PE=1 SV=2
Length = 259
Score = 240 bits (612), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 113/142 (79%), Positives = 130/142 (91%), Gaps = 2/142 (1%)
Query: 66 MANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQ--TPSDTKAFDSVERIKEGFI 123
M N+SYE+AIEALKKLL EK+DLK VAAAKV++ITA+LQ + SD+K+FD VERIKEGF+
Sbjct: 1 MGNESYEDAIEALKKLLIEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFV 60
Query: 124 HFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPP 183
FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF PG+AFVVRN+AN+VPP
Sbjct: 61 TFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPP 120
Query: 184 YDQTKYAGVGAAVEYAVLHLKV 205
+D+ KYAGVGAA+EYAVLHLKV
Sbjct: 121 FDKVKYAGVGAAIEYAVLHLKV 142
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1
Length = 190
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 68/73 (93%)
Query: 133 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGV 192
NP LY ELAKGQSPK++VFACSDSRVCPSH+LDFQPGEAFVVRN+AN+VPPYD K++G
Sbjct: 1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGA 60
Query: 193 GAAVEYAVLHLKV 205
GAA+EYAVLHLKV
Sbjct: 61 GAAIEYAVLHLKV 73
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 324
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 103/199 (51%), Gaps = 55/199 (27%)
Query: 8 NWCLTSVS-QAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDM 66
NWC +V+ +A+SS I +S P A +S + P LIR PV AAP
Sbjct: 73 NWCYATVAPRARSSTIAASLGTP---APSSSASFRPKLIRTTPVQAAP------------ 117
Query: 67 ANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFK 126
VA A ++ +VER+K GF FK
Sbjct: 118 ------------------------VAPALMDA---------------AVERLKTGFEKFK 138
Query: 127 REKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQ 186
E Y+K P + L GQ+PKYMVFAC+DSRVCPS L +PGEAF +RN+AN+VP Y +
Sbjct: 139 TEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCK 198
Query: 187 TKYAGVGAAVEYAVLHLKV 205
KYAGVG+A+EYAV LKV
Sbjct: 199 NKYAGVGSAIEYAVCALKV 217
>sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1
SV=1
Length = 219
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 115 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 174
++ I +GF+ F+RE + K AL+ +LA QSP+ + +CSDSR+ P V +PG+ FV+
Sbjct: 1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI 60
Query: 175 RNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
RN NIVP Y + GV A+VEYAV L+V
Sbjct: 61 RNAGNIVPSYG-PEPGGVSASVEYAVAALRV 90
>sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1
Length = 219
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 115 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 174
++ I +GF+ F+RE + K AL+ +LA QSP+ + +CSDSR+ P V +PG+ FV+
Sbjct: 1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI 60
Query: 175 RNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
RN NIVP Y + GV A+VEYAV L+V
Sbjct: 61 RNAGNIVPSYG-PEPGGVSASVEYAVAALRV 90
>sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=cynT PE=3 SV=1
Length = 220
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 118 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNV 177
I +GF+ F+R+ Y L+ LA Q+PK + ACSDSRV P + +PGE FV+RN
Sbjct: 4 IIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNA 63
Query: 178 ANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
NIVP Y + GV A+VEYAV L V
Sbjct: 64 GNIVPGYG-PQPGGVSASVEYAVAVLGV 90
>sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942)
GN=icfA PE=3 SV=1
Length = 272
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 115 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 174
+ ++ EG HF+ Y + L+ + AKGQ P+ + CSDSR+ P+ + GE FV+
Sbjct: 1 MRKLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVI 60
Query: 175 RNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
RN N++PP+ G GA++EYA+ L +
Sbjct: 61 RNAGNLIPPFGAAN-GGEGASIEYAIAALNI 90
>sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1805 PE=1
SV=2
Length = 228
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 106 PSDTKAF-----DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCP 160
PSD KA + ++I E + K +P +++LA GQSP+Y+ CSDSRV
Sbjct: 4 PSDRKAVTRYLEQTHDKIFESNRAWVASKKGADPEFFNKLAAGQSPEYLYIGCSDSRVPA 63
Query: 161 SHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
+ ++ GE FV RN+AN+VP D + + + YAV HLKV
Sbjct: 64 NEIMGLDAGEVFVHRNIANVVPTIDLSSM----SVINYAVGHLKV 104
>sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori (strain J99) GN=cynT PE=3
SV=1
Length = 221
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 121 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANI 180
G + F+ +YE+ LY L Q P + +C DSRV P+ + QPGE +V+RN+ N+
Sbjct: 6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNV 65
Query: 181 VPPYDQTKYA-GVGAAVEYAVLHLKVIKL 208
+PP K + A+VEYA+ H+ V L
Sbjct: 66 IPPKTSYKESLSTIASVEYAIAHVGVQNL 94
>sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=icfA PE=1 SV=1
Length = 274
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 115 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 174
++R+ EG F+ + + L+ +L+ GQ P+ + CSDSRV P+ + + G+ FV+
Sbjct: 1 MQRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVI 60
Query: 175 RNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
RN NI+PPY GAA+EYA++ L++
Sbjct: 61 RNAGNIIPPYGAANGG-EGAAMEYALVALEI 90
>sp|P61518|CAN_SHIFL Carbonic anhydrase 2 OS=Shigella flexneri GN=can PE=3 SV=1
Length = 220
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 131 EKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYA 190
E++P + +LA+ Q P+++ CSDSRV + +PGE FV RNVAN+V D
Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78
Query: 191 GVGAAVEYAVLHLKV 205
+ V+YAV L+V
Sbjct: 79 ---SVVQYAVDVLEV 90
>sp|P61517|CAN_ECOLI Carbonic anhydrase 2 OS=Escherichia coli (strain K12) GN=can PE=1
SV=1
Length = 220
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 131 EKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYA 190
E++P + +LA+ Q P+++ CSDSRV + +PGE FV RNVAN+V D
Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78
Query: 191 GVGAAVEYAVLHLKV 205
+ V+YAV L+V
Sbjct: 79 ---SVVQYAVDVLEV 90
>sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPBP8B7.05c PE=1 SV=2
Length = 328
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 115 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 174
++ + E + + ++ K P+ ++ Q+P+ + CSDSRV + +L+ PGE FV
Sbjct: 125 IKDLLERNLTWSQQTSRKYPSFFTATKDIQTPQVLWIGCSDSRVPETTILNLLPGEVFVH 184
Query: 175 RNVANIVPPYDQTKYAGVGAAVEYAVLHLKV 205
RN+AN+VP D A +EY+V LKV
Sbjct: 185 RNIANVVPRSDINAL----AVMEYSVTVLKV 211
>sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=can PE=1 SV=1
Length = 229
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 131 EKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYA 190
E+N + ELA Q+P Y+ CSDSRV + + +PGE FV RNVAN V D
Sbjct: 20 EENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTD----F 75
Query: 191 GVGAAVEYAVLHLKV 205
+ V+YAV LK+
Sbjct: 76 NCLSVVQYAVDVLKI 90
>sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=NCE103 PE=1 SV=1
Length = 221
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 141 AKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAV 200
AKGQSP + CSDSR + L PGE F +NVANI D T + A +E+A+
Sbjct: 45 AKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKNVANICHSEDLT----LKATLEFAI 99
Query: 201 LHLKVIKL 208
+ LKV K+
Sbjct: 100 ICLKVNKV 107
>sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=cynT PE=3 SV=1
Length = 221
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 140 LAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYA-GVGAAVEY 198
L Q P + +C DSRV P+ + +PGE +V+ N+ N+ PP K + A++EY
Sbjct: 25 LKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEY 84
Query: 199 AVLHLKVIKL 208
A+ H+ V L
Sbjct: 85 AIAHVGVQNL 94
>sp|Q22460|BCA1_CAEEL Beta carbonic anhydrase 1 OS=Caenorhabditis elegans GN=bca-1 PE=3
SV=1
Length = 270
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 115 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 174
+ +I G I F+ + + E+ SP ++F C DSR+ P+ Q G+ FVV
Sbjct: 1 MNKILRGVIQFRNTIRKDLVKQFEEIKNNPSPTAVMFTCMDSRMLPTRFTQSQVGDMFVV 60
Query: 175 RNVANIVPPY-DQTKYAGVGAAVEYAVLHLKV 205
RN N++P + ++ V E A L L V
Sbjct: 61 RNAGNMIPDAPNYGAFSEVSVNTEPAALELAV 92
>sp|O53573|MTCA2_MYCTU Carbonic anhydrase 2 OS=Mycobacterium tuberculosis GN=mtcA2 PE=1
SV=1
Length = 207
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 140 LAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYA 199
LA GQ P ++F C+DSRV + D G+ FVVR +++ + V ++EYA
Sbjct: 38 LAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVID-------SAVLGSIEYA 90
Query: 200 VLHLKV 205
V L V
Sbjct: 91 VTVLNV 96
>sp|A0R566|CYNT_MYCS2 Carbonic anhydrase OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=cynT PE=1 SV=1
Length = 206
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 138 SELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVE 197
+ L + Q P +VF C DSRV + D G+ FVVR +++ V ++E
Sbjct: 36 ASLTQAQRPTAVVFGCGDSRVAAEILFDQGLGDMFVVRTAGHVIDNA-------VLGSIE 88
Query: 198 YAVLHLKV 205
YAV LKV
Sbjct: 89 YAVTVLKV 96
>sp|A8XKV0|BCA1_CAEBR Beta carbonic anhydrase 1 OS=Caenorhabditis briggsae GN=bca-1 PE=3
SV=2
Length = 270
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 115 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVV 174
+ RI G I + ++ + ++ +P ++F C DSR+ P+ G+ FVV
Sbjct: 1 MNRIIRGVIQYNQKIKAGLVKQFEHVSDHPNPTAVMFTCMDSRMLPTRFTQSAVGDMFVV 60
Query: 175 RNVANIVPPY-DQTKYAGVGAAVEYAVLHLKV 205
RN N++P + Y+ V E A L L V
Sbjct: 61 RNAGNMIPAAPNYGSYSEVSINTEPAALELAV 92
>sp|Q9PL92|RIR2_CHLMU Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=nrdB PE=3 SV=1
Length = 346
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 7 NNWCLTSVSQAQS-SLIKSSTL----RPSIVARLNSPASPPSLIRNEPVFAAPAPIINPN 61
NNW T +S + L KS+ L R I+ L ++ SL+ N V A + NP
Sbjct: 49 NNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPE 108
Query: 62 WREDMANQSYEEAIEA 77
R+ + Q++EEA+
Sbjct: 109 ARQYLLRQAFEEAVHT 124
>sp|Q9Z6S4|RIR2_CHLPN Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
pneumoniae GN=nrdB PE=3 SV=1
Length = 346
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 7 NNWCLTSVSQAQS-SLIKSSTL----RPSIVARLNSPASPPSLIRNEPVFAAPAPIINPN 61
NNW T V A+ L KS L R I+ L ++ SL+ N V A I NP
Sbjct: 49 NNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPE 108
Query: 62 WREDMANQSYEEAIEA 77
R+ + Q++EEA+
Sbjct: 109 ARQYLLRQAFEEAVHT 124
>sp|O84835|RIR2_CHLTR Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=nrdB PE=1 SV=1
Length = 346
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 59/223 (26%)
Query: 7 NNWCLTSVSQAQS-SLIKSSTL----RPSIVARLNSPASPPSLIRNEPVFAAPAPIINPN 61
NNW T + + L KS L R I+ L ++ SL+ N V A + NP
Sbjct: 49 NNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPE 108
Query: 62 WREDMANQSYEEAIEALKKL-------LKEKEDLKPV---AAAKVE-----QITAQLQTP 106
R+ + Q++EEA+ L L EKE AA K + +IT ++ P
Sbjct: 109 ARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDP 168
Query: 107 SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDF 166
+ DSVE ++E + KN Y + +G +F S
Sbjct: 169 NFRT--DSVEGLQE---------FVKNLVGYYIIMEG------IFFYS------------ 199
Query: 167 QPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVIKLN 209
FV+ I+ + Q K G+G +Y +L + I LN
Sbjct: 200 ----GFVM-----ILSFHRQNKMIGIGEQYQY-ILRDETIHLN 232
>sp|Q70IV5|SYNEM_MOUSE Synemin OS=Mus musculus GN=Synm PE=1 SV=2
Length = 1561
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 23 KSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLL 82
++++L AR SPA+PP +R+ V + A ++ +WRE + Q YE+ + L++ L
Sbjct: 158 RAASLTMHFRARATSPAAPPPRLRD--VHDSYALLVAESWRESV--QLYEDEVRELEQAL 213
Query: 83 KEKED 87
+ ++
Sbjct: 214 RRGQE 218
>sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia virus (isolate FB29) GN=pol
PE=3 SV=1
Length = 1204
Score = 31.6 bits (70), Expect = 3.8, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 27 LRPSIVARLNSPASPPSLIRNEPVFAAPAPIIN---PNWREDMANQSYEEAIEALKKLLK 83
L P + R + P L E ++ AP P++N P+ + N S + ++AL L
Sbjct: 1041 LLPLALYRARNTPGPHGLTPYEILYGAPPPLVNFPDPDMAKVTHNPSLQAHLQAL--YLV 1098
Query: 84 EKEDLKPVAAAKVEQI 99
+ E +P+AAA EQ+
Sbjct: 1099 QHEVWRPLAAAYQEQL 1114
>sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia virus (isolate 57) GN=pol
PE=3 SV=1
Length = 1204
Score = 31.6 bits (70), Expect = 3.8, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 27 LRPSIVARLNSPASPPSLIRNEPVFAAPAPIIN---PNWREDMANQSYEEAIEALKKLLK 83
L P + R + P L E ++ AP P++N P+ + N S + ++AL L
Sbjct: 1041 LLPLALYRARNTPGPHGLTPYEILYGAPPPLVNFPDPDMAKVTHNPSLQAHLQAL--YLV 1098
Query: 84 EKEDLKPVAAAKVEQI 99
+ E +P+AAA EQ+
Sbjct: 1099 QHEVWRPLAAAYQEQL 1114
>sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia virus (isolate PVC-211)
GN=pol PE=3 SV=1
Length = 1204
Score = 31.6 bits (70), Expect = 4.0, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 27 LRPSIVARLNSPASPPSLIRNEPVFAAPAPIIN---PNWREDMANQSYEEAIEALKKLLK 83
L P + R + P L E ++ AP P++N P+ + N S + ++AL L
Sbjct: 1041 LLPLALYRARNTPGPHGLTPYEILYGAPPPLVNFPDPDMAKVTHNPSLQAHLQAL--YLV 1098
Query: 84 EKEDLKPVAAAKVEQI 99
+ E +P+AAA EQ+
Sbjct: 1099 QHEVWRPLAAAYQEQL 1114
>sp|O59757|SPC7_SCHPO Kinetochore protein spc7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=spc7 PE=1 SV=1
Length = 1364
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 13/67 (19%)
Query: 75 IEALKKLLKEKEDLKPVAAAKVEQITA-----QLQTPSDTK--------AFDSVERIKEG 121
+E ++LL EKE+ + A K+EQ+T +L+T ++ FD ++R +E
Sbjct: 1089 VERRRRLLSEKEERRKELAIKIEQVTNSCSDLELRTNAEQDFYAKNQDFEFDEIKRYEEQ 1148
Query: 122 FIHFKRE 128
++ K E
Sbjct: 1149 LLNLKNE 1155
>sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus GN=pol PE=3 SV=2
Length = 1196
Score = 30.8 bits (68), Expect = 7.4, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 27 LRPSIVARLNSPASPPSLIRNEPVFAAPAPIIN---PNWREDMANQSYEEAIEALKKLLK 83
L P + R + P L E ++ AP P++N P+ E + S + ++AL+ +
Sbjct: 1036 LLPLALYRARNTPGPHGLTPYEILYGAPPPLVNFHDPDMSELTNSPSLQAHLQALQTV-- 1093
Query: 84 EKEDLKPVAAAKVEQITAQLQTPSDTKAFDSV 115
++E KP+A A +Q+ Q P + DSV
Sbjct: 1094 QREIWKPLAEAYRDQLD-QPVIPHPFRIGDSV 1124
>sp|Q6R7H7|Y047_OSHVF Uncharacterized protein ORF47 OS=Ostreid herpesvirus 1 (isolate
France) GN=ORF47 PE=4 SV=1
Length = 1412
Score = 30.8 bits (68), Expect = 7.5, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 58 INPNWREDMA-NQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQ 102
+N ++++D+A +EA+EA +K+LKE ED+ +A K + + +
Sbjct: 718 LNMDYKKDLAIAYGSKEAVEAEEKMLKENEDMDGLALLKTKNVNKR 763
>sp|O86963|GLPO_ENTCA Alpha-glycerophosphate oxidase OS=Enterococcus casseliflavus
GN=glpO PE=1 SV=3
Length = 609
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 38 PASPPSLIRNEPVFAAPAPIINPNWRED--------MANQSYEEAIEALKKLLKEKEDLK 89
P + +L E +A P+I N D ++++S+E+ +E++K+ L + E +
Sbjct: 330 PHAQITLDDIEASWAGLRPLITNNGGSDYNGGGKGKLSDESFEQIVESVKEYLAD-ERQR 388
Query: 90 PVAAAKVEQITAQLQT----PSDTKAFDSVERIKEGFI 123
PV V+Q +++ PS S+ER K+G +
Sbjct: 389 PVVEKAVKQAQERVEASKVDPSQVSRGSSLERSKDGLL 426
>sp|Q92J82|SYD_RICCN Aspartate--tRNA ligase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=aspS PE=3 SV=2
Length = 602
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 59 NPNWREDMANQSYEEAIEALKKLLKEKEDL----KPVAAAKVEQITAQLQTPSDTKAF-- 112
NP ED + YE I ++ ED P +V + +++ +DT F
Sbjct: 56 NPQLMEDASRLRYESVITVRGTVVARSEDTINNTLPTGHVEVLAVEFSVESAADTLPFVI 115
Query: 113 ----DSVE--RIKEGFIHFKREKYEKNPALYSEL 140
D+ E R+K F+ +REK N L S++
Sbjct: 116 NTEKDAPEESRLKHRFLDLRREKLHNNIILRSQI 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,048,243
Number of Sequences: 539616
Number of extensions: 2838380
Number of successful extensions: 9475
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 9424
Number of HSP's gapped (non-prelim): 81
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)