BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028461
(208 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+G APDF A AV D F VKLSDY GK YV+LFFYPLDFTFV PTEI AFS+R +F
Sbjct: 7 IGKPAPDFKATAVVDGAFKEVKLSDYKGK-YVVLFFYPLDFTFVXPTEIIAFSNRAEDFR 65
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
KL E+LGVS DS F+HLAW+ T RK GGLG L PL+AD+T+ +S+ YGVL D+
Sbjct: 66 KLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDE 121
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV + EF +KLSDY GK Y++ FFYPLDFTFVCPTEI AFSDR EF
Sbjct: 50 ISKPAPQWEGTAVINGEFKELKLSDYRGK-YLVFFFYPLDFTFVCPTEIIAFSDRVHEFR 108
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+NTE++ S DS F+HLAW+ T RK GGLG +K PL++D+T ISK YGV + DQ
Sbjct: 109 AINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQ 164
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP+F A AV D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AFSDR EF
Sbjct: 8 IGHPAPNFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+KLN++++G S DS F HLAWV T +K GGLG + PL++D ++I++ YGVL D+
Sbjct: 67 KKLNSQVIGASVDSHFEHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 87/117 (74%), Gaps = 2/117 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP F A AV D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AFSDR EF
Sbjct: 8 IGHPAPSFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+KLN +++G S DS FSHLAW+ T +K GGLG + PL++D ++I++ YGVL D+
Sbjct: 67 KKLNCQVIGASVDSHFSHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTE 137
P V AP F AV EF + L D+ GK Y++LFFYPLDFTFVCPTEI AFSD+ +E
Sbjct: 27 PAVTQHAPYFKGTAVVSGEFKEISLDDFKGK-YLVLFFYPLDFTFVCPTEIIAFSDKASE 85
Query: 138 FEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLI 192
F +N E++ VS DS FSHLAW+ T RK+GGLG + L++D+TK IS+ YGVL+
Sbjct: 86 FHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLL 140
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP+F +AV + EF + L DY GK YV+LFFYP DFTFVCPTEI AFSD+ EF N
Sbjct: 46 APEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNC 104
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+++ STDS +SHLAW DRKSGGLG +K PL+AD + ISK+YGV
Sbjct: 105 QVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVF 152
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 56 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 114
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D
Sbjct: 115 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED 169
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP+F +AV + EF + L DY GK YV+LFFYP DFTFVCPTEI AFSD+ EF N
Sbjct: 43 APEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNC 101
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+++ STDS +SHLAW DRKSGGLG +K PL+AD + ISK+YGV
Sbjct: 102 QVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVF 149
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP+F +AV + EF + L DY GK YV+LFFYP DFTFVCPTEI AFSD+ EF N
Sbjct: 43 APEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNC 101
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+++ STDS +SHLAW DRKSGGLG +K PL+AD + ISK+YGV
Sbjct: 102 QVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVF 149
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 136 bits (343), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED 177
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 136 bits (343), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED 177
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 136 bits (343), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED 177
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF +NT
Sbjct: 25 APYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINT 83
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
E++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D
Sbjct: 84 EVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED 134
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 56 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 114
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
+NTE++ S DS F HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D
Sbjct: 115 SINTEVVACSVDSQFEHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED 169
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 136 bits (342), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 77 PPLVGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 135
P VG AP F AEAVF D F V L+ +IGKKYV+L+FYPLDFTFVCP+EI A
Sbjct: 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKAL 79
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
F + N E+LG S DS ++HLAW +T GG+G++K+ L++DITKSISK Y VL D
Sbjct: 80 DAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDS 139
Query: 196 V 196
V
Sbjct: 140 V 140
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP F A AV D +F ++ LSDY GK YV+ FFYPLDFTFV PTEI AFSDR EF
Sbjct: 8 IGHPAPSFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVSPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+KLN +++G S DS F HLAW+ T +K GGLG + PL++D ++I++ YGVL D+
Sbjct: 67 KKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 86/117 (73%), Gaps = 2/117 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP+F A AV D +F ++ LSDY GK YV+ FFYPLDFTFV PTEI AFSDR EF
Sbjct: 8 IGHPAPNFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVDPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+KLN++++G S DS F HL WV T +K GGLG + PL++D ++I++ YGVL D+
Sbjct: 67 KKLNSQVIGASVDSHFEHLEWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 84 APDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN 142
AP F AEAVF D F V LSD+IGKKYV+L+FYPLDFTFVCP+EI A F++ N
Sbjct: 6 APSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN 65
Query: 143 TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQV 196
E+LG S DS F+HLAW +T GG+G++K+ LI+DI+KSI++SY VL + V
Sbjct: 66 VELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESV 119
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 90/141 (63%), Gaps = 8/141 (5%)
Query: 55 PVSLSRGSRSRKSF-VVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVIL 113
P SR S + S + KA + P AP + AV D EF +KL+DY GK Y++
Sbjct: 36 PGEASRVSVADHSLHLSKAKISKP------APYWEGTAVIDGEFKELKLTDYRGK-YLVF 88
Query: 114 FFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173
FFYPLDFTFV PTEI AF DR EF +NTE++ S DS F+HLAW+ T R+ GGLG ++
Sbjct: 89 FFYPLDFTFVXPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIR 148
Query: 174 YPLIADITKSISKSYGVLIPD 194
PL++D+T ISK YGV + D
Sbjct: 149 IPLLSDLTHQISKDYGVYLED 169
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFV PTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVXPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED 177
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+ + AP F A+ + F + LS Y GK +V+LFFYPLDFTFVCPTE+ AFSD + F
Sbjct: 28 INSPAPSFEEVALMPNGSFKKISLSSYKGK-WVVLFFYPLDFTFVCPTEVIAFSDSVSRF 86
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+LN E+L S DS ++HL W DRK GGLG + P++AD TK+I++SYGVL Q
Sbjct: 87 NELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQ 143
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Query: 82 NTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK 140
+ APDF A+ + F V L+ Y GK +++LFFYP+DFTFVCPTEI FSDR EF
Sbjct: 10 HPAPDFNETALMPNGTFKKVALTSYKGK-WLVLFFYPMDFTFVCPTEICQFSDRVKEFSD 68
Query: 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+ E+L S DS +SHLAW +RK GGLG + P++AD TK I KSYGVL
Sbjct: 69 IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVL 119
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Query: 79 LVGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTE 137
LV A +F A+ + + E INV LS +IG+KY L FYPL++TFVCPTEI F+ +
Sbjct: 26 LVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKD 85
Query: 138 FEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
FE N E+LG+S DSV+SHLAW + GG+G++++ L++DI K ISK+Y VL
Sbjct: 86 FENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL 139
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+ + AP+F A+ + F V LS Y GK YV+LFFYP DFTFVCPTEI FSD F
Sbjct: 8 LNHPAPEFDDXALXPNGTFKKVSLSSYKGK-YVVLFFYPXDFTFVCPTEIIQFSDDAKRF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
++NTE++ S DS +SHL W DRK GGLG P +AD TK+I+++YGVL D
Sbjct: 67 AEINTEVISCSCDSEYSHLQWTSVDRKKGGLGPXAIPXLADKTKAIARAYGVLDED 122
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Query: 79 LVGNTAPDFAAEAVFDQEFIN--VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYT 136
+V APDF A AV ++ +LS +GK VILFF+P DFTFVCPTEI AF R
Sbjct: 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVK 61
Query: 137 EFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQV 196
+F + ++GVS DS H AW T + GG+G + +P++ADITKSIS+ Y VL + +
Sbjct: 62 DFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAI 121
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
V AP F AV D F V L Y GK YV+L F PL FTFV PTEI AFS+ +FE
Sbjct: 25 VQKQAPTFKKTAVVDGVFDEVSLDKYKGK-YVVLAFIPLAFTFVSPTEIIAFSEAAKKFE 83
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+ ++L STDS +S LAW RK GGLG + PL+AD S+S+ YGVLI ++
Sbjct: 84 EQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEE 139
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162
SD K+ ++FF+P DFTFVCPTEI AFS EFE + +ILGVS DS F+H W
Sbjct: 40 SDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRA- 98
Query: 163 DRKSGGLGDLKYPLIADITKSISKSYGVLIPDQV 196
+ L L +P ++DI + +S++ GVL D V
Sbjct: 99 --QHNDLKTLPFPXLSDIKRELSQAAGVLNADGV 130
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
VSTD+ F+H AW + S + +KY +I D T ++++++ + D+
Sbjct: 69 SVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
VSTD+ F+H AW + S + +KY +I D T ++++++ + D+
Sbjct: 69 SVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
VSTD+ F H AW + S + +KY +I D T ++++++ + D+
Sbjct: 69 SVSTDTHFDHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
VSTD+ F H AW + S + +KY +I D T ++++++ + D+
Sbjct: 69 SVSTDTHFVHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
VSTD+ F H AW + S + +KY +I D T ++++++ + D+
Sbjct: 69 SVSTDTHFIHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 79 LVGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTE 137
L+G F A+A ++F V +D GK + I+ FYP DF+FVCPTE+ Y E
Sbjct: 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGK-WSIVVFYPADFSFVCPTELEDVQKEYAE 60
Query: 138 FEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+KL E+ VSTD+ F H AW + S +G ++Y +I D +++IS+ + VL
Sbjct: 61 LKKLGVEVYSVSTDTHFVHKAWHEN---SPAVGSIEYIMIGDPSQTISRQFDVL 111
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFV PTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
VSTD+ F+H AW + S + +KY +I D T ++++++ + D+
Sbjct: 69 SVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDE 114
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 6 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 61
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 62 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 116
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 115
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 115
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 5 PLIGERFPE--XEVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 115
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVSTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 115
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 6 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRY 61
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 62 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 116
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 115
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 6 PLIGERFPE--XEVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRY 61
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L
Sbjct: 62 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLL 116
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+G P+F A++ + +K D++G + +LF +P DFT V TE+ +F+
Sbjct: 5 LGEVFPNFEADSTIGK----LKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFK 60
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRK-SGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
K +++ +S D+V H W + + SG GD+ YP+IAD T+ ++ G++ PD+
Sbjct: 61 KRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDE 117
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 80 VGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G T P+F A+A D +F +L YI + ILF +P DFT VC TE+ + +F
Sbjct: 5 LGATFPNFTAKASGIDGDF---ELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDF 61
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKK 198
KLN +++G S +S SH W++ + G L + P++ D ++ ++ ++ D+ +K
Sbjct: 62 LKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIM--DEQEK 119
Query: 199 SL 200
+
Sbjct: 120 DI 121
>pdb|2YWN|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Sulfolobus Tokodaii
pdb|4G2E|A Chain A, Crystal Structure Of A Dimeric Prxq From Sulfolobus
Tokodaii
Length = 157
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+G APDF + D E VKLS GK V+L FYP FT VC E+ F D +F
Sbjct: 6 IGELAPDFE---LPDTELKKVKLSALKGK-VVVLAFYPAAFTQVCTKEMCTFRDSMAKFN 61
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190
++N +LG+S D FS+ A+ + ++ L + +++D + + K Y V
Sbjct: 62 QVNAVVLGISVDPPFSNKAFKEHNK-------LNFTILSDYNREVVKKYNV 105
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
L+G+ AP+F A + ++ D++G + ILF +P DFT V TE+ + EF
Sbjct: 6 LLGDVAPNFEANTTVGR----IRFHDFLGDSWGILFSHPRDFTPVXTTELGRAAKLAPEF 61
Query: 139 EKLNTEILGVSTDSVFSHLAW---VQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
K N +++ +S DSV HLAW + L +P+I D + ++ G+L P +
Sbjct: 62 AKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAE 121
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 80 VGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G T P+F A+A D +F +L YI + ILF +P DFT V TE+ + +F
Sbjct: 5 LGATFPNFTAKASGIDGDF---ELYKYIENSWAILFSHPNDFTPVXTTELAELGKMHEDF 61
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKK 198
KLN +++G S +S SH W++ + G L + P++ D ++ ++ ++ D+ +K
Sbjct: 62 LKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIM--DEQEK 119
Query: 199 SL 200
+
Sbjct: 120 DI 121
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG TAPDF + DQ V L Y G K V+L F+PL FT +C E+ D EFE
Sbjct: 4 VGATAPDFT---LRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFE 60
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI--TKSISKSYGVL 191
++ L +S +H W +SG +PL++D ++S++YGV
Sbjct: 61 NDDSAALAISVGPPPTHKIWAT---QSG----FTFPLLSDFWPHGAVSQAYGVF 107
>pdb|1XVW|A Chain A, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
pdb|1XVW|B Chain B, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
Length = 160
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG TAPDF + DQ V L Y G K V+L F+PL FT + E+ D EFE
Sbjct: 11 VGATAPDFT---LRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGIXQGELDQLRDHLPEFE 67
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI--TKSISKSYGVL 191
++ L +S +H W +SG +PL++D ++S++YGV
Sbjct: 68 NDDSAALAISVGPPPTHKIWAT---QSG----FTFPLLSDFWPHGAVSQAYGVF 114
>pdb|3HJP|A Chain A, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|B Chain B, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|C Chain C, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|D Chain D, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
Length = 164
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKL-SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G AP+ + D + VK+ SD+ GK V+L FYP FT V E++ F D +F
Sbjct: 4 IGEKAPEIE---LVDTDLKKVKIPSDFKGK-VVVLAFYPAAFTSVSTKEMSTFRDSMAKF 59
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190
++N ++G+S D FS+ A+ + ++ + + +++D + K+YGV
Sbjct: 60 NEVNAVVIGISVDPPFSNKAFKEQNK-------INFTIVSDFNREAVKAYGV 104
>pdb|3DRN|A Chain A, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
pdb|3DRN|B Chain B, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
Length = 161
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG+ AP F A ++ + LSDYIGK ++L+FYP D T E +AF D + +
Sbjct: 4 VGDKAPLFEGIADNGEK---ISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLK 60
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190
+ ++GVS+D + SH + + + L + L++D K I + YG
Sbjct: 61 DYDVVVIGVSSDDINSHKRFKEKYK-------LPFILVSDPDKKIRELYGA 104
>pdb|4GQC|A Chain A, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|B Chain B, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|C Chain C, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|D Chain D, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
Length = 164
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G APDF + +Q+F V L + + + + +L F+P F+ VC E+ F D+ +
Sbjct: 7 LGEKAPDFT---LPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQL 63
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
EK N E+L +S DS + + +R L + L++D + + K Y V D
Sbjct: 64 EKANAEVLAISVDSPWCLKKFKDENR-------LAFNLLSDYNREVIKLYNVYHED 112
>pdb|2CX3|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX4|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|E Chain E, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|F Chain F, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|G Chain G, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|H Chain H, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|4GQF|A Chain A, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
pdb|4GQF|B Chain B, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
Length = 164
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G APDF + +Q+F V L + + + + +L F+P F+ VC E+ F D+ +
Sbjct: 7 LGEKAPDFT---LPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKXAQL 63
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
EK N E+L +S DS + + +R L + L++D + + K Y V D
Sbjct: 64 EKANAEVLAISVDSPWCLKKFKDENR-------LAFNLLSDYNREVIKLYNVYHED 112
>pdb|3IXR|A Chain A, Crystal Structure Of Xylella Fastidiosa Prxq C47s Mutant
Length = 179
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQ 161
LSDY ++++L+FYP D T TE F+ +FE++N +LGVS DSV SH ++
Sbjct: 46 LSDYT-NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCA 104
Query: 162 TDRKSGGLGDLKYPLIADITKSISKSYGVL 191
K G +PL++D + K++ V+
Sbjct: 105 ---KQG----FTFPLVSDSDAILCKAFDVI 127
>pdb|3GKK|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL 169
+++++FYP D T C TE F+ EF+K +ILGVS DSV SH + K G
Sbjct: 37 WLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCA---KQG-- 91
Query: 170 GDLKYPLIADITKSISKSYGVL 191
+PL++D +++ +++ V+
Sbjct: 92 --FAFPLVSDGDEALCRAFDVI 111
>pdb|3GKM|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL 169
+++++FYP D T TE F+ EF+K +ILGVS DSV SH D S
Sbjct: 37 WLVIYFYPKDSTPGSTTEGLDFNALLPEFDKAGAKILGVSRDSVKSH------DNFSAKQ 90
Query: 170 GDLKYPLIADITKSISKSYGVL 191
G +PL++D +++ +++ V+
Sbjct: 91 G-FAFPLVSDGDEALCRAFDVI 111
>pdb|3GKN|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
pdb|3GKN|B Chain B, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
Length = 163
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL 169
+++++FYP D T TE F+ EF+K +ILGVS DSV SH + K G
Sbjct: 37 WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCA---KQG-- 91
Query: 170 GDLKYPLIADITKSISKSYGVL 191
+PL++D +++ +++ V+
Sbjct: 92 --FAFPLVSDGDEALCRAFDVI 111
>pdb|3P7X|A Chain A, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|B Chain B, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|C Chain C, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|D Chain D, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
Length = 166
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 81 GNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK 140
G+ APDF V D + V L+DY GKK +I +D T VC + F+ ++ E
Sbjct: 23 GDFAPDFT---VLDNDLNQVTLADYAGKKKLISVVPSID-TGVCDQQTRKFNSDASKEEG 78
Query: 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194
+ +L +S D F+ W S GL ++ L S ++YGV++ +
Sbjct: 79 I---VLTISADLPFAQKRWC----ASAGLDNV-ITLSDHRDLSFGENYGVVMEE 124
>pdb|4HPV|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From
Sulfolobus Solfataricus 982
pdb|4HPV|B Chain B, Crystal Structure Of S-Adenosylmethionine Synthetase From
Sulfolobus Solfataricus 982
Length = 407
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 67 SFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPT 126
S + K VE+ G PD+ A+AV ++ + KLS Y KKY ++ + LD T V
Sbjct: 15 SDIEKLQVELVERKGLGHPDYIADAVAEEA--SRKLSLYYLKKYGVILHHNLDKTLVVGG 72
Query: 127 EIT 129
+ T
Sbjct: 73 QAT 75
>pdb|4EO3|A Chain A, Peroxiredoxin Nitroreductase Fusion Enzyme
pdb|4EO3|B Chain B, Peroxiredoxin Nitroreductase Fusion Enzyme
Length = 322
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGG 168
KY ILFF+P T E FS FEK +++G+S DS V+ ++
Sbjct: 25 KYTILFFFPKAGTSGSTREAVEFS--RENFEK--AQVVGISRDS-------VEALKRFKE 73
Query: 169 LGDLKYPLIADITKSISKSYGVLIPDQ-VKKSLLIFTW 205
DLK L++D + + + VL + V+ + LI W
Sbjct: 74 KNDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRW 111
>pdb|2A4V|A Chain A, Crystal Structure Of A Truncated Mutant Of Yeast Nuclear
Thiol Peroxidase
Length = 159
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFF-YPLDFTFVCPTEITAFSDRYTEF 138
+G+ PD + + +++ ++ L V++FF YP T + + F D Y E
Sbjct: 9 IGDPIPDLS---LLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQEL 65
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179
++ + G+S DSV S +K +L Y L++D
Sbjct: 66 KEY-AAVFGLSADSVTSQ-------KKFQSKQNLPYHLLSD 98
>pdb|2HV8|D Chain D, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
pdb|2HV8|E Chain E, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
pdb|2HV8|F Chain F, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 64
Score = 26.9 bits (58), Expect = 8.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 61 GSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGK 108
GS ++ F S + + + + D EA+ QE IN +L DYI +
Sbjct: 1 GSGAKSLFSTAFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDR 48
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,892,334
Number of Sequences: 62578
Number of extensions: 186394
Number of successful extensions: 408
Number of sequences better than 100.0: 62
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 343
Number of HSP's gapped (non-prelim): 62
length of query: 208
length of database: 14,973,337
effective HSP length: 94
effective length of query: 114
effective length of database: 9,091,005
effective search space: 1036374570
effective search space used: 1036374570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)