Query 028461
Match_columns 208
No_of_seqs 231 out of 1343
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:43:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 100.0 4E-32 1.4E-36 220.4 12.8 129 76-205 21-149 (216)
2 3tue_A Tryparedoxin peroxidase 100.0 8E-31 2.7E-35 213.2 14.4 127 78-205 26-153 (219)
3 4g2e_A Peroxiredoxin; redox pr 100.0 3.3E-30 1.1E-34 199.1 9.6 119 75-205 2-125 (157)
4 4gqc_A Thiol peroxidase, perox 100.0 6.1E-30 2.1E-34 199.3 4.9 117 78-205 5-127 (164)
5 3tjj_A Peroxiredoxin-4; thiore 100.0 9E-28 3.1E-32 199.8 14.0 127 78-205 62-188 (254)
6 3mng_A Peroxiredoxin-5, mitoch 99.9 1E-27 3.5E-32 188.7 12.5 121 75-205 12-144 (173)
7 3qpm_A Peroxiredoxin; oxidored 99.9 2E-27 6.9E-32 196.0 13.9 127 78-205 48-174 (240)
8 3uma_A Hypothetical peroxiredo 99.9 1.6E-27 5.4E-32 189.3 10.5 122 75-205 23-155 (184)
9 4f82_A Thioredoxin reductase; 99.9 3.8E-27 1.3E-31 185.7 12.2 122 75-205 8-146 (176)
10 2xhf_A Peroxiredoxin 5; oxidor 99.9 9.3E-27 3.2E-31 182.9 13.9 121 77-205 13-140 (171)
11 2pn8_A Peroxiredoxin-4; thiore 99.9 6.3E-27 2.2E-31 189.2 12.8 127 78-205 19-145 (211)
12 1tp9_A Peroxiredoxin, PRX D (t 99.9 8.1E-27 2.8E-31 180.7 12.2 120 77-205 3-134 (162)
13 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 1.1E-26 3.8E-31 181.4 12.6 118 78-205 3-130 (167)
14 1zye_A Thioredoxin-dependent p 99.9 4.3E-26 1.5E-30 185.4 15.0 127 78-205 27-153 (220)
15 2c0d_A Thioredoxin peroxidase 99.9 4.3E-26 1.5E-30 185.9 13.6 123 78-205 25-152 (221)
16 2v2g_A Peroxiredoxin 6; oxidor 99.9 2.2E-26 7.7E-31 189.1 9.8 124 78-205 3-133 (233)
17 1psq_A Probable thiol peroxida 99.9 1.1E-25 3.8E-30 174.0 12.6 115 78-205 16-132 (163)
18 3ztl_A Thioredoxin peroxidase; 99.9 1.1E-25 3.9E-30 183.0 12.8 128 77-205 39-166 (222)
19 1uul_A Tryparedoxin peroxidase 99.9 2.1E-25 7.2E-30 178.4 14.0 127 78-205 6-133 (202)
20 2i81_A 2-Cys peroxiredoxin; st 99.9 1E-25 3.5E-30 182.4 12.1 123 78-205 21-148 (213)
21 2a4v_A Peroxiredoxin DOT5; yea 99.9 1.3E-25 4.5E-30 172.6 11.9 116 78-205 7-124 (159)
22 3ixr_A Bacterioferritin comigr 99.9 7.1E-26 2.4E-30 178.2 10.4 106 78-194 21-130 (179)
23 1xiy_A Peroxiredoxin, pfaop; a 99.9 5.6E-26 1.9E-30 180.2 9.8 120 78-205 1-142 (182)
24 3gkn_A Bacterioferritin comigr 99.9 1.1E-25 3.8E-30 173.2 11.2 105 78-193 7-113 (163)
25 3p7x_A Probable thiol peroxida 99.9 1.5E-25 5.2E-30 173.7 11.4 117 74-205 17-135 (166)
26 1prx_A HORF6; peroxiredoxin, h 99.9 2.1E-25 7.1E-30 182.1 12.7 124 78-205 5-137 (224)
27 1q98_A Thiol peroxidase, TPX; 99.9 2.3E-25 8E-30 172.7 12.1 115 78-205 17-136 (165)
28 3drn_A Peroxiredoxin, bacterio 99.9 4.5E-25 1.5E-29 170.1 13.1 105 78-192 2-106 (161)
29 1qmv_A Human thioredoxin perox 99.9 3E-25 1E-29 176.8 12.4 127 78-205 5-131 (197)
30 2h01_A 2-Cys peroxiredoxin; th 99.9 4.4E-25 1.5E-29 175.0 13.2 122 79-205 1-127 (192)
31 1nm3_A Protein HI0572; hybrid, 99.9 2E-25 6.9E-30 183.1 11.6 118 78-205 3-131 (241)
32 1n8j_A AHPC, alkyl hydroperoxi 99.9 2.7E-25 9.4E-30 175.9 11.3 120 79-205 2-124 (186)
33 3zrd_A Thiol peroxidase; oxido 99.9 3.7E-25 1.3E-29 177.5 11.6 119 73-205 48-171 (200)
34 3keb_A Probable thiol peroxida 99.9 6.3E-25 2.2E-29 179.2 13.1 116 73-205 18-143 (224)
35 1xcc_A 1-Cys peroxiredoxin; un 99.9 1.7E-25 5.9E-30 182.1 9.7 123 78-205 3-134 (220)
36 2yzh_A Probable thiol peroxida 99.9 7.9E-25 2.7E-29 170.3 11.3 117 74-205 18-139 (171)
37 3a2v_A Probable peroxiredoxin; 99.9 7.7E-25 2.6E-29 181.5 11.5 122 78-205 5-130 (249)
38 1xvw_A Hypothetical protein RV 99.9 2.3E-24 7.9E-29 165.2 12.2 118 78-205 9-128 (160)
39 1we0_A Alkyl hydroperoxide red 99.9 6.8E-24 2.3E-28 167.3 13.4 121 78-205 1-125 (187)
40 1zof_A Alkyl hydroperoxide-red 99.9 8.8E-24 3E-28 168.2 13.5 123 78-205 1-129 (198)
41 2pwj_A Mitochondrial peroxired 99.9 3.3E-24 1.1E-28 167.8 10.5 111 78-194 7-126 (171)
42 2bmx_A Alkyl hydroperoxidase C 99.9 3.2E-23 1.1E-27 164.7 13.4 123 78-205 4-138 (195)
43 4eo3_A Bacterioferritin comigr 99.9 2.9E-23 1E-27 178.0 11.2 107 82-205 2-108 (322)
44 2jsy_A Probable thiol peroxida 99.9 3.8E-23 1.3E-27 159.7 9.4 114 78-205 18-134 (167)
45 1xvq_A Thiol peroxidase; thior 99.9 1.8E-22 6.1E-27 157.9 12.0 113 78-205 18-135 (175)
46 3u5r_E Uncharacterized protein 99.9 3.7E-22 1.3E-26 161.6 10.9 103 78-191 32-142 (218)
47 3fw2_A Thiol-disulfide oxidore 99.9 2.4E-21 8.3E-26 146.8 13.4 102 78-191 5-115 (150)
48 3ewl_A Uncharacterized conserv 99.9 1.5E-21 5E-26 146.3 11.2 101 79-191 2-108 (142)
49 2lrn_A Thiol:disulfide interch 99.9 4.7E-21 1.6E-25 145.6 14.1 103 78-192 3-109 (152)
50 4fo5_A Thioredoxin-like protei 99.9 1.6E-21 5.5E-26 146.7 9.8 102 78-192 7-113 (143)
51 3gl3_A Putative thiol:disulfid 99.9 1.4E-20 4.8E-25 142.3 14.0 103 77-192 2-105 (152)
52 3eur_A Uncharacterized protein 99.9 3.3E-21 1.1E-25 144.8 10.3 102 78-191 5-112 (142)
53 3hcz_A Possible thiol-disulfid 99.8 1.2E-20 3.9E-25 141.6 12.5 104 77-192 4-111 (148)
54 1xzo_A BSSCO, hypothetical pro 99.8 1.1E-20 3.9E-25 146.0 12.6 101 78-190 7-117 (174)
55 3kcm_A Thioredoxin family prot 99.8 2.5E-20 8.4E-25 141.2 13.6 102 78-191 2-105 (154)
56 1jfu_A Thiol:disulfide interch 99.8 2E-20 6.7E-25 146.6 12.5 102 78-191 34-138 (186)
57 2cvb_A Probable thiol-disulfid 99.8 3.5E-20 1.2E-24 145.6 13.5 101 78-191 7-115 (188)
58 3or5_A Thiol:disulfide interch 99.8 4.9E-20 1.7E-24 140.9 13.6 101 78-191 8-109 (165)
59 3fkf_A Thiol-disulfide oxidore 99.8 3.6E-20 1.2E-24 138.8 12.6 103 78-192 5-114 (148)
60 3eyt_A Uncharacterized protein 99.8 1.5E-20 5E-25 143.2 10.4 103 80-192 2-117 (158)
61 2obi_A PHGPX, GPX-4, phospholi 99.8 9.3E-21 3.2E-25 148.7 9.4 96 78-185 21-126 (183)
62 3lwa_A Secreted thiol-disulfid 99.8 2.5E-20 8.5E-25 145.8 11.8 101 78-190 31-141 (183)
63 2f9s_A Thiol-disulfide oxidore 99.8 4.3E-20 1.5E-24 139.8 12.7 102 79-192 1-103 (151)
64 2gs3_A PHGPX, GPX-4, phospholi 99.8 1.2E-20 4.1E-25 148.6 9.3 95 78-184 23-127 (185)
65 2lrt_A Uncharacterized protein 99.8 7.9E-20 2.7E-24 139.4 12.4 102 78-192 9-113 (152)
66 3lor_A Thiol-disulfide isomera 99.8 3E-20 1E-24 141.6 9.9 102 79-192 4-120 (160)
67 2v1m_A Glutathione peroxidase; 99.8 2.2E-20 7.5E-25 143.6 9.2 96 78-185 5-111 (169)
68 2ywi_A Hypothetical conserved 99.8 4.1E-20 1.4E-24 145.8 10.0 105 78-192 18-130 (196)
69 3hdc_A Thioredoxin family prot 99.8 4.5E-20 1.5E-24 141.1 9.8 100 78-191 15-114 (158)
70 2l5o_A Putative thioredoxin; s 99.8 2.5E-19 8.5E-24 135.5 13.7 102 78-191 2-105 (153)
71 2k6v_A Putative cytochrome C o 99.8 3.8E-20 1.3E-24 142.6 8.8 103 78-193 10-123 (172)
72 2p31_A CL683, glutathione pero 99.8 7.5E-20 2.6E-24 143.5 10.3 90 78-179 23-121 (181)
73 3me7_A Putative uncharacterize 99.8 1.3E-19 4.3E-24 141.2 10.6 104 79-191 2-116 (170)
74 2vup_A Glutathione peroxidase- 99.8 6.3E-20 2.1E-24 145.0 9.0 95 78-184 22-127 (190)
75 3kij_A Probable glutathione pe 99.8 1.4E-19 4.9E-24 141.7 10.6 90 78-179 12-110 (180)
76 2p5q_A Glutathione peroxidase 99.8 1.4E-19 4.8E-24 139.2 9.7 95 78-184 6-111 (170)
77 3erw_A Sporulation thiol-disul 99.8 2.7E-19 9.3E-24 133.4 10.8 101 78-191 9-113 (145)
78 3kh7_A Thiol:disulfide interch 99.8 5.1E-19 1.7E-23 138.3 12.4 99 77-191 29-131 (176)
79 3dwv_A Glutathione peroxidase- 99.8 9.7E-20 3.3E-24 143.7 6.7 96 78-184 20-125 (187)
80 2lja_A Putative thiol-disulfid 99.8 1.7E-18 5.9E-23 130.7 12.8 104 77-192 2-108 (152)
81 2i3y_A Epididymal secretory gl 99.8 5.4E-19 1.9E-23 143.3 10.6 90 79-181 30-134 (215)
82 3ha9_A Uncharacterized thiored 99.8 2.3E-19 7.9E-24 137.8 8.0 100 78-192 11-130 (165)
83 2f8a_A Glutathione peroxidase 99.8 4.6E-19 1.6E-23 142.7 9.8 97 78-180 20-125 (208)
84 2ggt_A SCO1 protein homolog, m 99.8 7.4E-19 2.5E-23 134.3 10.2 99 83-193 2-112 (164)
85 2hyx_A Protein DIPZ; thioredox 99.8 1.1E-18 3.9E-23 151.1 12.6 103 77-191 50-163 (352)
86 2b7k_A SCO1 protein; metalloch 99.8 5.8E-19 2E-23 140.8 9.8 102 78-191 13-127 (200)
87 2ls5_A Uncharacterized protein 99.6 1.3E-20 4.6E-25 143.9 0.0 102 78-191 7-111 (159)
88 3raz_A Thioredoxin-related pro 99.8 1.4E-18 4.9E-23 131.6 11.1 94 85-189 4-100 (151)
89 3cmi_A Peroxiredoxin HYR1; thi 99.8 2.1E-19 7.2E-24 139.3 6.5 89 80-181 8-105 (171)
90 2b5x_A YKUV protein, TRXY; thi 99.8 4E-19 1.4E-23 132.9 7.7 104 78-192 1-110 (148)
91 2rli_A SCO2 protein homolog, m 99.8 2.9E-18 1E-22 132.0 12.5 96 85-192 7-114 (171)
92 2r37_A Glutathione peroxidase 99.8 1.2E-18 4.1E-23 140.4 10.5 89 80-181 13-116 (207)
93 3ia1_A THIO-disulfide isomeras 99.8 5.9E-19 2E-23 133.7 7.3 98 78-191 5-108 (154)
94 4h86_A Peroxiredoxin type-2; o 99.8 5E-18 1.7E-22 135.1 11.8 125 76-205 24-169 (199)
95 1i5g_A Tryparedoxin II; electr 99.8 1.7E-18 5.7E-23 130.1 8.3 101 80-191 3-107 (144)
96 1zzo_A RV1677; thioredoxin fol 99.7 6.8E-18 2.3E-22 124.2 10.5 98 80-191 1-100 (136)
97 1lu4_A Soluble secreted antige 99.7 6.8E-18 2.3E-22 124.6 10.2 96 82-191 2-98 (136)
98 4hde_A SCO1/SENC family lipopr 99.7 9.8E-18 3.4E-22 130.7 11.0 94 79-181 7-107 (170)
99 4evm_A Thioredoxin family prot 99.7 1.6E-17 5.5E-22 121.9 10.2 96 83-191 1-103 (138)
100 2b1k_A Thiol:disulfide interch 99.7 2.9E-17 9.9E-22 126.3 11.6 101 78-192 22-125 (168)
101 1o8x_A Tryparedoxin, TRYX, TXN 99.7 5.7E-18 1.9E-22 127.6 5.7 101 79-191 3-107 (146)
102 1kng_A Thiol:disulfide interch 99.7 5.7E-17 1.9E-21 122.6 8.8 100 78-192 8-117 (156)
103 1o73_A Tryparedoxin; electron 99.7 2.1E-17 7.4E-22 123.7 5.8 102 78-191 2-107 (144)
104 3s9f_A Tryparedoxin; thioredox 99.7 7.3E-18 2.5E-22 130.4 2.4 102 78-191 22-127 (165)
105 2h30_A Thioredoxin, peptide me 99.7 3.3E-17 1.1E-21 125.0 4.6 99 79-191 15-120 (164)
106 2lus_A Thioredoxion; CR-Trp16, 99.5 1.2E-17 4.2E-22 124.5 0.0 102 82-191 2-107 (143)
107 2fwh_A Thiol:disulfide interch 99.2 7.2E-12 2.5E-16 93.1 2.9 98 78-185 4-105 (134)
108 3hxs_A Thioredoxin, TRXP; elec 99.1 2E-10 6.7E-15 85.4 6.3 86 94-189 38-123 (141)
109 2l57_A Uncharacterized protein 99.0 3E-10 1E-14 82.9 6.0 89 83-184 5-95 (126)
110 2ju5_A Thioredoxin disulfide i 99.0 1.7E-10 5.7E-15 87.8 4.2 101 78-190 24-135 (154)
111 3ul3_B Thioredoxin, thioredoxi 98.9 7.1E-10 2.4E-14 81.3 4.8 88 78-180 18-105 (128)
112 1z6n_A Hypothetical protein PA 98.9 2E-10 6.7E-15 89.3 -0.6 81 101-189 48-128 (167)
113 3fk8_A Disulphide isomerase; A 98.8 3.1E-09 1.1E-13 78.1 5.5 76 103-185 25-105 (133)
114 2pu9_C TRX-F, thioredoxin F-ty 98.7 2.7E-08 9.1E-13 70.6 6.6 69 104-183 21-89 (111)
115 3f9u_A Putative exported cytoc 98.7 1.8E-09 6.2E-14 83.0 0.4 80 99-185 39-144 (172)
116 2l5l_A Thioredoxin; structural 98.7 3.5E-08 1.2E-12 73.0 7.0 72 106-186 36-107 (136)
117 3p2a_A Thioredoxin 2, putative 98.7 1.3E-08 4.3E-13 76.3 3.7 88 79-179 30-117 (148)
118 3qou_A Protein YBBN; thioredox 98.6 2.4E-08 8.3E-13 82.7 4.9 64 105-178 24-87 (287)
119 3qfa_C Thioredoxin; protein-pr 98.6 1.2E-08 4.3E-13 73.5 2.3 66 103-179 27-92 (116)
120 1faa_A Thioredoxin F; electron 98.6 5.8E-08 2E-12 70.2 5.6 61 104-174 34-94 (124)
121 2dj3_A Protein disulfide-isome 98.6 6E-08 2E-12 70.9 5.6 68 107-183 25-93 (133)
122 2dml_A Protein disulfide-isome 98.6 2.5E-07 8.4E-12 67.3 8.8 66 109-183 36-101 (130)
123 3d6i_A Monothiol glutaredoxin- 98.6 6.6E-08 2.3E-12 68.5 5.0 64 107-179 21-84 (112)
124 3f3q_A Thioredoxin-1; His TAG, 98.5 4.8E-08 1.6E-12 69.5 4.1 66 107-183 24-89 (109)
125 2dj0_A Thioredoxin-related tra 98.5 6.9E-08 2.4E-12 71.4 4.8 42 110-152 28-69 (137)
126 3gix_A Thioredoxin-like protei 98.5 3.3E-08 1.1E-12 74.8 3.1 63 107-179 23-85 (149)
127 2kuc_A Putative disulphide-iso 98.5 5.5E-08 1.9E-12 70.8 4.2 78 99-184 19-99 (130)
128 3aps_A DNAJ homolog subfamily 98.5 8.9E-08 3.1E-12 68.9 4.8 72 109-189 22-93 (122)
129 2voc_A Thioredoxin; electron t 98.5 1.8E-07 6.1E-12 66.6 6.3 63 106-178 16-78 (112)
130 2j23_A Thioredoxin; immune pro 98.5 5.2E-08 1.8E-12 70.6 3.4 65 106-179 32-96 (121)
131 3zzx_A Thioredoxin; oxidoreduc 98.5 6.4E-08 2.2E-12 69.1 3.7 66 102-178 15-80 (105)
132 1sen_A Thioredoxin-like protei 98.5 1.2E-09 4.2E-14 84.0 -5.9 83 99-190 38-123 (164)
133 2f51_A Thioredoxin; electron t 98.5 7.1E-08 2.4E-12 69.7 3.8 63 107-180 23-85 (118)
134 3cxg_A Putative thioredoxin; m 98.5 4.2E-08 1.4E-12 72.6 2.5 73 94-178 27-99 (133)
135 3die_A Thioredoxin, TRX; elect 98.5 1E-07 3.4E-12 66.5 4.2 64 106-179 18-81 (106)
136 2vim_A Thioredoxin, TRX; thior 98.5 8.2E-08 2.8E-12 66.8 3.7 66 103-179 15-80 (104)
137 3d22_A TRXH4, thioredoxin H-ty 98.5 4.5E-08 1.6E-12 72.3 2.3 69 99-178 38-106 (139)
138 1x5e_A Thioredoxin domain cont 98.5 3.6E-07 1.2E-11 66.2 7.1 61 110-178 24-84 (126)
139 1x5d_A Protein disulfide-isome 98.5 2.7E-07 9.1E-12 67.2 6.3 65 109-181 26-93 (133)
140 2lst_A Thioredoxin; structural 97.8 1.9E-08 6.5E-13 73.4 0.0 86 97-190 9-101 (130)
141 3m9j_A Thioredoxin; oxidoreduc 98.5 7.6E-08 2.6E-12 67.1 3.1 68 103-181 16-83 (105)
142 2djj_A PDI, protein disulfide- 98.5 2.4E-07 8.3E-12 66.4 5.7 66 106-183 24-93 (121)
143 3emx_A Thioredoxin; structural 98.5 5.1E-08 1.7E-12 72.2 2.1 62 110-179 33-100 (135)
144 2dj1_A Protein disulfide-isome 98.5 3.4E-07 1.2E-11 67.4 6.6 64 107-179 34-99 (140)
145 1wou_A Thioredoxin -related pr 98.4 1.7E-07 5.9E-12 68.1 4.6 47 103-152 20-73 (123)
146 2wz9_A Glutaredoxin-3; protein 98.4 3.7E-07 1.3E-11 68.9 6.5 63 106-179 31-93 (153)
147 1thx_A Thioredoxin, thioredoxi 98.4 6.3E-07 2.2E-11 63.3 7.3 61 109-178 26-86 (115)
148 1xfl_A Thioredoxin H1; AT3G510 98.4 1.8E-07 6.2E-12 68.2 4.5 62 106-178 37-98 (124)
149 1nsw_A Thioredoxin, TRX; therm 98.4 4E-07 1.4E-11 63.5 6.1 61 109-178 18-78 (105)
150 1xwb_A Thioredoxin; dimerizati 98.4 1.5E-07 5.2E-12 65.6 3.8 66 103-178 16-81 (106)
151 2vlu_A Thioredoxin, thioredoxi 98.4 5.5E-08 1.9E-12 70.1 1.5 85 79-177 7-93 (122)
152 2oe3_A Thioredoxin-3; electron 98.4 1.7E-07 5.8E-12 67.3 4.0 62 106-178 29-90 (114)
153 4euy_A Uncharacterized protein 98.4 8.6E-08 2.9E-12 67.4 2.3 61 109-179 19-79 (105)
154 3h79_A Thioredoxin-like protei 98.4 8.4E-07 2.9E-11 64.5 7.7 67 107-182 33-103 (127)
155 1ep7_A Thioredoxin CH1, H-type 98.4 2.3E-07 7.8E-12 65.5 4.5 58 107-174 24-81 (112)
156 1t00_A Thioredoxin, TRX; redox 98.4 2.2E-07 7.6E-12 65.7 4.2 62 107-178 23-84 (112)
157 1dby_A Chloroplast thioredoxin 98.4 2.6E-07 8.8E-12 64.7 4.4 62 107-178 19-80 (107)
158 1w4v_A Thioredoxin, mitochondr 98.4 5.8E-07 2E-11 64.7 6.4 62 107-178 31-92 (119)
159 1zma_A Bacterocin transport ac 98.4 2.4E-07 8.2E-12 66.5 4.3 64 107-179 29-95 (118)
160 2xc2_A Thioredoxinn; oxidoredu 98.4 1.1E-07 3.9E-12 68.0 2.4 65 102-178 28-92 (117)
161 3tco_A Thioredoxin (TRXA-1); d 98.4 7.5E-07 2.6E-11 62.2 6.4 63 106-178 20-82 (109)
162 2i4a_A Thioredoxin; acidophIle 98.4 6.6E-07 2.3E-11 62.4 6.1 61 109-178 21-81 (107)
163 1fb6_A Thioredoxin M; electron 98.4 5.9E-07 2E-11 62.4 5.7 61 109-178 19-79 (105)
164 1gh2_A Thioredoxin-like protei 98.4 2.8E-07 9.6E-12 64.8 4.1 62 106-178 20-81 (107)
165 3idv_A Protein disulfide-isome 98.4 3.5E-07 1.2E-11 73.2 5.1 66 106-180 31-98 (241)
166 1syr_A Thioredoxin; SGPP, stru 98.3 4.4E-07 1.5E-11 64.5 4.6 62 106-178 25-86 (112)
167 1qgv_A Spliceosomal protein U5 98.3 5.2E-07 1.8E-11 67.5 5.2 68 107-184 23-90 (142)
168 3q6o_A Sulfhydryl oxidase 1; p 98.3 1.2E-06 4.2E-11 70.9 7.7 66 109-180 31-98 (244)
169 2trx_A Thioredoxin; electron t 98.3 7.4E-07 2.5E-11 62.4 5.6 61 109-178 21-81 (108)
170 3gnj_A Thioredoxin domain prot 98.3 5E-07 1.7E-11 63.5 4.4 62 109-179 23-84 (111)
171 2vm1_A Thioredoxin, thioredoxi 98.3 4.2E-07 1.4E-11 64.6 3.9 62 106-178 27-88 (118)
172 2av4_A Thioredoxin-like protei 98.3 6.9E-07 2.4E-11 68.5 5.3 44 108-153 41-84 (160)
173 1ti3_A Thioredoxin H, PTTRXH1; 98.3 4.6E-07 1.6E-11 63.9 3.7 63 106-179 25-87 (113)
174 2e0q_A Thioredoxin; electron t 98.3 1.4E-06 4.6E-11 60.1 6.1 62 106-178 15-76 (104)
175 3uvt_A Thioredoxin domain-cont 98.3 3.4E-07 1.2E-11 64.3 3.0 64 107-179 21-86 (111)
176 2ppt_A Thioredoxin-2; thiredox 98.3 4.7E-07 1.6E-11 68.7 4.0 62 109-179 65-126 (155)
177 2yzu_A Thioredoxin; redox prot 98.3 1.6E-06 5.5E-11 60.4 6.5 62 107-178 18-79 (109)
178 3apq_A DNAJ homolog subfamily 98.3 4.1E-07 1.4E-11 72.2 3.6 68 105-183 112-179 (210)
179 1r26_A Thioredoxin; redox-acti 98.2 7.6E-07 2.6E-11 65.1 4.1 62 106-178 36-97 (125)
180 2i1u_A Thioredoxin, TRX, MPT46 98.2 8.4E-07 2.9E-11 63.4 4.3 63 107-179 30-92 (121)
181 2o8v_B Thioredoxin 1; disulfid 98.2 1.3E-06 4.6E-11 63.9 5.0 43 107-152 40-82 (128)
182 3hz4_A Thioredoxin; NYSGXRC, P 98.2 7.7E-07 2.6E-11 66.0 3.7 62 107-178 24-85 (140)
183 1v98_A Thioredoxin; oxidoreduc 98.2 1.2E-06 4.2E-11 64.7 4.6 64 106-179 49-112 (140)
184 3ed3_A Protein disulfide-isome 98.2 2.4E-06 8.2E-11 71.8 7.0 67 109-182 36-102 (298)
185 2l6c_A Thioredoxin; oxidoreduc 98.2 1.8E-06 6.2E-11 61.2 5.3 60 109-178 20-79 (110)
186 1fo5_A Thioredoxin; disulfide 98.2 2.7E-06 9.4E-11 56.8 5.9 42 110-153 4-45 (85)
187 3dxb_A Thioredoxin N-terminall 98.2 4.4E-07 1.5E-11 72.7 1.9 62 109-179 31-92 (222)
188 1nho_A Probable thioredoxin; b 98.2 3.2E-06 1.1E-10 56.5 5.9 59 110-177 3-61 (85)
189 2dbc_A PDCL2, unnamed protein 98.2 5.9E-07 2E-11 66.5 2.3 57 110-179 32-88 (135)
190 3ira_A Conserved protein; meth 98.1 2.2E-06 7.7E-11 66.7 5.3 83 99-184 31-117 (173)
191 1mek_A Protein disulfide isome 98.1 1.5E-06 5E-11 61.6 3.9 65 106-179 23-89 (120)
192 3t58_A Sulfhydryl oxidase 1; o 98.1 2.6E-06 9E-11 77.0 6.1 66 109-180 31-98 (519)
193 2yj7_A LPBCA thioredoxin; oxid 97.4 3.6E-07 1.2E-11 63.3 0.0 42 109-152 20-61 (106)
194 1wmj_A Thioredoxin H-type; str 98.1 1.8E-06 6.2E-11 62.4 3.7 43 106-152 35-77 (130)
195 1ilo_A Conserved hypothetical 98.1 1.6E-05 5.4E-10 52.1 7.5 55 111-177 2-56 (77)
196 1a0r_P Phosducin, MEKA, PP33; 98.0 1.1E-06 3.6E-11 72.2 1.0 42 107-152 133-174 (245)
197 3kp8_A Vkorc1/thioredoxin doma 98.0 8.5E-08 2.9E-12 68.6 -4.9 69 98-177 3-72 (106)
198 1a8l_A Protein disulfide oxido 98.0 2.1E-05 7.3E-10 62.3 8.6 61 110-178 136-199 (226)
199 3f8u_A Protein disulfide-isome 98.0 2.7E-06 9.3E-11 75.4 3.3 67 107-183 370-437 (481)
200 2hls_A Protein disulfide oxido 98.0 2.2E-05 7.5E-10 63.9 7.9 65 104-177 135-202 (243)
201 3idv_A Protein disulfide-isome 97.9 3.1E-05 1.1E-09 61.7 8.5 65 107-180 147-213 (241)
202 2qsi_A Putative hydrogenase ex 97.9 8.9E-06 3.1E-10 60.9 4.8 73 109-190 34-108 (137)
203 3qcp_A QSOX from trypanosoma b 97.9 1E-05 3.6E-10 72.1 6.0 64 110-181 44-114 (470)
204 1sji_A Calsequestrin 2, calseq 97.9 5.1E-05 1.7E-09 64.6 10.1 61 109-178 29-96 (350)
205 1oaz_A Thioredoxin 1; immune s 97.9 6.1E-06 2.1E-10 59.9 3.1 44 107-153 21-78 (123)
206 2qgv_A Hydrogenase-1 operon pr 97.9 5E-06 1.7E-10 62.5 2.6 74 109-190 35-110 (140)
207 3evi_A Phosducin-like protein 97.9 1.2E-05 4E-10 58.6 4.0 40 110-152 25-64 (118)
208 3ph9_A Anterior gradient prote 97.8 2.1E-06 7E-11 65.4 -0.5 78 103-190 40-120 (151)
209 2b5e_A Protein disulfide-isome 97.8 4.5E-05 1.5E-09 68.0 7.8 63 109-179 32-94 (504)
210 2trc_P Phosducin, MEKA, PP33; 97.7 3.8E-06 1.3E-10 67.5 -0.1 41 107-151 120-160 (217)
211 2dlx_A UBX domain-containing p 97.7 0.00018 6.1E-09 54.7 8.9 70 106-183 41-114 (153)
212 2ywm_A Glutaredoxin-like prote 97.7 0.00011 3.7E-09 58.4 7.8 58 110-177 138-195 (229)
213 2es7_A Q8ZP25_salty, putative 97.7 2.8E-05 9.7E-10 58.2 3.8 70 110-190 36-110 (142)
214 3uem_A Protein disulfide-isome 97.7 4E-05 1.4E-09 65.2 5.1 62 109-180 268-330 (361)
215 1eej_A Thiol:disulfide interch 97.7 3.6E-05 1.2E-09 61.4 4.4 45 100-150 79-123 (216)
216 3iv4_A Putative oxidoreductase 97.7 0.00011 3.9E-09 52.9 6.5 41 109-153 25-65 (112)
217 2r2j_A Thioredoxin domain-cont 97.6 8.9E-05 3E-09 63.9 7.1 59 107-174 22-85 (382)
218 3gyk_A 27KDA outer membrane pr 97.6 4.3E-05 1.5E-09 58.3 4.1 47 99-149 14-60 (175)
219 3apo_A DNAJ homolog subfamily 97.6 0.00011 3.6E-09 69.0 7.1 68 102-179 450-517 (780)
220 3ga4_A Dolichyl-diphosphooligo 97.5 0.00028 9.7E-09 55.0 7.9 65 109-181 38-113 (178)
221 3hd5_A Thiol:disulfide interch 97.4 0.00016 5.5E-09 56.2 5.2 43 106-151 24-66 (195)
222 3f8u_A Protein disulfide-isome 97.4 0.00019 6.5E-09 63.4 5.9 56 109-173 22-77 (481)
223 3apo_A DNAJ homolog subfamily 97.4 0.00012 4E-09 68.7 4.3 61 109-178 676-736 (780)
224 1wjk_A C330018D20RIK protein; 97.3 9E-05 3.1E-09 52.0 2.5 58 99-163 6-63 (100)
225 2b5e_A Protein disulfide-isome 97.3 0.00015 5E-09 64.7 4.4 44 107-152 376-421 (504)
226 1a8l_A Protein disulfide oxido 97.2 0.0015 5.2E-08 51.4 8.5 65 105-178 20-85 (226)
227 2e7p_A Glutaredoxin; thioredox 97.2 0.00019 6.5E-09 50.8 2.8 24 110-135 21-44 (116)
228 2k8s_A Thioredoxin; dimer, str 97.2 0.00038 1.3E-08 46.2 3.9 48 112-163 4-51 (80)
229 1ego_A Glutaredoxin; electron 97.1 0.0004 1.4E-08 46.2 3.7 49 112-163 3-52 (85)
230 3us3_A Calsequestrin-1; calciu 97.0 0.0033 1.1E-07 53.9 9.0 62 109-178 31-98 (367)
231 2fgx_A Putative thioredoxin; N 96.9 0.00073 2.5E-08 48.2 3.6 54 110-177 30-83 (107)
232 3h93_A Thiol:disulfide interch 96.8 0.001 3.4E-08 51.4 4.1 42 106-150 24-65 (192)
233 1h75_A Glutaredoxin-like prote 96.7 0.0022 7.6E-08 42.2 4.6 54 112-179 3-56 (81)
234 1hyu_A AHPF, alkyl hydroperoxi 96.6 0.0045 1.6E-07 55.5 7.3 58 110-177 119-176 (521)
235 3dml_A Putative uncharacterize 96.5 5.4E-05 1.8E-09 55.0 -4.7 75 110-190 20-95 (116)
236 1ttz_A Conserved hypothetical 96.4 0.0017 5.7E-08 44.4 2.6 50 112-178 3-52 (87)
237 1r7h_A NRDH-redoxin; thioredox 96.3 0.0058 2E-07 39.2 4.6 54 112-179 3-56 (75)
238 2djk_A PDI, protein disulfide- 96.2 0.0033 1.1E-07 45.8 3.5 43 107-152 22-64 (133)
239 2znm_A Thiol:disulfide interch 96.2 0.0085 2.9E-07 46.1 6.0 43 106-151 21-63 (195)
240 1z6m_A Conserved hypothetical 96.1 0.011 3.7E-07 44.7 6.3 50 99-150 19-69 (175)
241 2rem_A Disulfide oxidoreductas 96.0 0.0065 2.2E-07 46.6 4.3 42 106-150 24-65 (193)
242 2qc7_A ERP31, ERP28, endoplasm 96.0 0.016 5.6E-07 46.9 6.8 50 109-163 23-77 (240)
243 3hz8_A Thiol:disulfide interch 95.9 0.0053 1.8E-07 47.7 3.6 42 107-151 24-65 (193)
244 1v58_A Thiol:disulfide interch 95.8 0.039 1.3E-06 44.3 8.5 46 100-150 90-135 (241)
245 3uem_A Protein disulfide-isome 95.8 0.026 9E-07 47.6 7.8 51 110-163 137-187 (361)
246 3nzn_A Glutaredoxin; structura 95.7 0.019 6.6E-07 39.8 5.5 58 112-179 24-83 (103)
247 2ywm_A Glutaredoxin-like prote 95.7 0.016 5.5E-07 45.6 5.6 54 118-178 34-88 (229)
248 2lqo_A Putative glutaredoxin R 95.6 0.017 5.7E-07 39.8 4.9 44 112-163 6-49 (92)
249 2cq9_A GLRX2 protein, glutared 95.6 0.016 5.5E-07 42.1 5.0 34 112-153 29-62 (130)
250 1un2_A DSBA, thiol-disulfide i 95.4 0.0023 8E-08 50.3 -0.2 43 106-151 112-157 (197)
251 1t3b_A Thiol:disulfide interch 95.3 0.011 3.7E-07 46.7 3.3 39 106-150 85-123 (211)
252 1kte_A Thioltransferase; redox 95.1 0.02 7E-07 39.3 4.0 22 112-134 14-35 (105)
253 2c0g_A ERP29 homolog, windbeut 95.1 0.073 2.5E-06 43.3 7.8 51 109-163 34-89 (248)
254 2klx_A Glutaredoxin; thioredox 95.0 0.049 1.7E-06 36.3 5.6 32 112-151 8-39 (89)
255 2ht9_A Glutaredoxin-2; thiored 95.0 0.022 7.5E-07 42.5 4.1 33 112-152 51-83 (146)
256 3kp9_A Vkorc1/thioredoxin doma 95.0 0.006 2.1E-07 51.0 0.9 38 99-138 189-226 (291)
257 3c1r_A Glutaredoxin-1; oxidize 94.9 0.027 9.1E-07 40.3 4.1 33 112-152 27-63 (118)
258 2hze_A Glutaredoxin-1; thiored 94.8 0.024 8.4E-07 40.0 3.8 34 111-152 20-56 (114)
259 3qmx_A Glutaredoxin A, glutare 94.8 0.048 1.6E-06 37.7 5.2 44 111-162 17-60 (99)
260 1fov_A Glutaredoxin 3, GRX3; a 94.1 0.082 2.8E-06 34.2 4.8 54 112-179 3-57 (82)
261 3l9v_A Putative thiol-disulfid 93.7 0.021 7.1E-07 44.1 1.4 40 110-151 16-58 (189)
262 3ctg_A Glutaredoxin-2; reduced 93.3 0.07 2.4E-06 38.8 3.7 33 112-152 39-75 (129)
263 2khp_A Glutaredoxin; thioredox 93.1 0.11 3.9E-06 34.6 4.3 44 112-163 8-52 (92)
264 2yan_A Glutaredoxin-3; oxidore 92.8 0.16 5.5E-06 35.0 4.9 27 119-152 30-56 (105)
265 3feu_A Putative lipoprotein; a 92.8 0.04 1.4E-06 42.4 1.8 39 107-150 22-60 (185)
266 2hls_A Protein disulfide oxido 92.8 0.13 4.5E-06 41.2 4.9 51 109-163 26-82 (243)
267 3rhb_A ATGRXC5, glutaredoxin-C 92.7 0.077 2.6E-06 37.1 3.1 43 112-162 21-67 (113)
268 3h8q_A Thioredoxin reductase 3 92.6 0.1 3.5E-06 36.7 3.7 33 112-152 19-51 (114)
269 1wik_A Thioredoxin-like protei 92.6 0.1 3.5E-06 36.4 3.6 36 110-153 16-55 (109)
270 3ic4_A Glutaredoxin (GRX-1); s 91.9 0.18 6E-06 33.6 4.0 32 112-151 14-45 (92)
271 3msz_A Glutaredoxin 1; alpha-b 89.8 0.66 2.3E-05 30.1 5.3 20 112-132 6-25 (89)
272 4dvc_A Thiol:disulfide interch 89.7 0.38 1.3E-05 35.9 4.5 41 107-150 21-61 (184)
273 3c7m_A Thiol:disulfide interch 88.6 0.5 1.7E-05 35.6 4.5 42 107-151 17-59 (195)
274 4f9z_D Endoplasmic reticulum r 88.4 2.2 7.5E-05 33.3 8.3 51 110-163 133-183 (227)
275 3l9s_A Thiol:disulfide interch 88.3 0.25 8.5E-06 38.1 2.6 42 107-151 21-65 (191)
276 1aba_A Glutaredoxin; electron 88.0 1.1 3.8E-05 29.4 5.4 30 114-151 4-37 (87)
277 1z3e_A Regulatory protein SPX; 86.0 0.83 2.8E-05 33.0 4.1 60 117-190 7-70 (132)
278 3fz4_A Putative arsenate reduc 85.2 0.98 3.4E-05 32.2 4.2 63 114-190 6-72 (120)
279 3gx8_A Monothiol glutaredoxin- 85.0 1.9 6.5E-05 30.6 5.7 45 110-162 17-68 (121)
280 3l78_A Regulatory protein SPX; 84.8 0.81 2.8E-05 32.6 3.6 63 115-191 4-70 (120)
281 1t1v_A SH3BGRL3, SH3 domain-bi 84.2 2.3 7.9E-05 28.2 5.5 42 118-162 9-52 (93)
282 3l4n_A Monothiol glutaredoxin- 84.0 0.62 2.1E-05 33.7 2.6 21 112-133 16-36 (127)
283 3gkx_A Putative ARSC family re 82.3 0.88 3E-05 32.5 2.8 62 115-190 8-73 (120)
284 3zyw_A Glutaredoxin-3; metal b 82.1 1.1 3.7E-05 31.4 3.2 48 105-161 12-64 (111)
285 3ipz_A Monothiol glutaredoxin- 81.6 1.3 4.6E-05 30.6 3.6 45 110-162 19-67 (109)
286 2wem_A Glutaredoxin-related pr 81.4 1.5 5.1E-05 31.1 3.8 46 110-163 21-71 (118)
287 3gv1_A Disulfide interchange p 81.4 1 3.4E-05 33.3 2.9 41 100-148 7-47 (147)
288 2wci_A Glutaredoxin-4; redox-a 81.4 0.93 3.2E-05 33.1 2.7 35 110-152 36-74 (135)
289 2ct6_A SH3 domain-binding glut 80.3 2.8 9.5E-05 29.1 4.9 42 118-162 15-58 (111)
290 3tdg_A DSBG, putative uncharac 80.2 1.4 4.9E-05 36.2 3.8 41 106-151 146-186 (273)
291 3gn3_A Putative protein-disulf 80.2 1.6 5.5E-05 33.3 3.9 40 110-150 16-55 (182)
292 3gmf_A Protein-disulfide isome 78.9 4.5 0.00015 31.4 6.1 49 100-150 8-58 (205)
293 1s3c_A Arsenate reductase; ARS 76.9 1.6 5.5E-05 32.1 2.8 63 115-191 6-72 (141)
294 1u6t_A SH3 domain-binding glut 76.4 4.2 0.00014 29.1 4.9 44 117-163 6-51 (121)
295 2kok_A Arsenate reductase; bru 74.6 1.7 5.8E-05 30.8 2.4 59 116-190 10-72 (120)
296 2jvx_A NF-kappa-B essential mo 74.5 0.8 2.7E-05 24.3 0.4 20 121-140 6-25 (28)
297 1rw1_A Conserved hypothetical 74.1 1.4 4.8E-05 30.9 1.8 59 116-190 5-67 (114)
298 3bci_A Disulfide bond protein 73.3 4.1 0.00014 30.4 4.5 40 110-150 13-54 (186)
299 3rdw_A Putative arsenate reduc 73.2 2.3 7.7E-05 30.3 2.7 63 115-191 9-76 (121)
300 3f0i_A Arsenate reductase; str 72.1 2.4 8.3E-05 30.0 2.7 65 114-192 7-76 (119)
301 2ec4_A FAS-associated factor 1 72.0 9.1 0.00031 29.1 6.1 69 81-156 29-104 (178)
302 2axo_A Hypothetical protein AT 71.7 15 0.00051 30.0 7.6 38 110-151 44-81 (270)
303 1pn0_A Phenol 2-monooxygenase; 68.2 10 0.00035 34.7 6.7 37 78-116 479-517 (665)
304 1nm3_A Protein HI0572; hybrid, 65.5 6.1 0.00021 30.8 4.1 33 112-152 172-204 (241)
305 3ghf_A Septum site-determining 64.7 16 0.00056 25.8 5.8 51 105-163 45-95 (120)
306 2wul_A Glutaredoxin related pr 64.2 9 0.00031 27.2 4.3 47 109-163 20-71 (118)
307 3gha_A Disulfide bond formatio 62.3 10 0.00034 29.0 4.7 46 103-150 25-72 (202)
308 2r47_A Uncharacterized protein 62.2 18 0.00061 27.1 5.7 61 112-181 87-147 (157)
309 3f4s_A Alpha-DSBA1, putative u 60.2 13 0.00043 29.2 4.9 48 101-150 33-82 (226)
310 3ktb_A Arsenical resistance op 59.2 40 0.0014 23.4 6.8 77 112-192 7-105 (106)
311 3ga8_A HTH-type transcriptiona 58.7 5.1 0.00017 26.1 2.0 35 104-139 23-63 (78)
312 1xhj_A Nitrogen fixation prote 56.1 19 0.00066 24.1 4.6 35 95-132 25-59 (88)
313 3kgk_A Arsenical resistance op 54.4 45 0.0015 23.3 6.5 79 112-194 4-104 (110)
314 2x8g_A Thioredoxin glutathione 46.1 17 0.00057 32.5 3.9 32 112-151 20-51 (598)
315 3vhs_A ATPase wrnip1; zinc fin 45.7 2.7 9.1E-05 21.6 -0.8 11 120-130 8-18 (29)
316 1sji_A Calsequestrin 2, calseq 44.7 35 0.0012 28.0 5.6 66 110-180 247-315 (350)
317 1th5_A NIFU1; iron-sulfur clus 42.0 30 0.001 22.3 3.7 40 95-137 22-62 (74)
318 3mjh_B Early endosome antigen 40.9 5.8 0.0002 21.9 0.0 19 121-139 8-26 (34)
319 3j21_Z 50S ribosomal protein L 38.6 63 0.0022 21.6 5.1 57 132-191 21-77 (99)
320 3us3_A Calsequestrin-1; calciu 37.6 47 0.0016 27.6 5.3 53 110-163 249-303 (367)
321 1w41_A 50S ribosomal protein L 35.6 72 0.0025 21.4 5.1 56 133-191 23-78 (101)
322 2l82_A Designed protein OR32; 33.0 84 0.0029 22.1 5.0 48 131-181 92-139 (162)
323 2obb_A Hypothetical protein; s 32.0 44 0.0015 24.2 3.6 46 128-180 26-74 (142)
324 2dkh_A 3-hydroxybenzoate hydro 31.2 1.2E+02 0.0042 27.2 7.3 53 78-133 467-522 (639)
325 4ev1_A Anabena TIC22; TIC22 fo 29.9 1.6E+02 0.0053 23.6 6.8 92 82-190 12-119 (252)
326 2pr7_A Haloacid dehalogenase/e 28.3 93 0.0032 20.6 4.8 38 126-163 18-55 (137)
327 2kpt_A Putative secreted prote 27.2 1.6E+02 0.0054 21.3 6.0 55 125-180 26-83 (148)
328 4as2_A Phosphorylcholine phosp 27.0 41 0.0014 27.9 3.0 38 126-163 143-180 (327)
329 2in3_A Hypothetical protein; D 26.6 61 0.0021 24.2 3.8 37 111-149 9-45 (216)
330 4gxt_A A conserved functionall 26.1 62 0.0021 27.4 4.1 39 125-163 220-258 (385)
331 1veh_A NIFU-like protein hirip 25.2 29 0.00099 23.4 1.5 34 96-132 33-66 (92)
332 1l6r_A Hypothetical protein TA 24.8 1.7E+02 0.0059 22.1 6.2 35 129-163 25-59 (227)
333 4g9p_A 4-hydroxy-3-methylbut-2 24.6 1.5E+02 0.0051 25.6 6.1 68 109-181 22-89 (406)
334 2l4c_A Endoplasmic reticulum r 24.1 1.2E+02 0.0042 21.0 4.8 35 108-148 39-73 (124)
335 3noy_A 4-hydroxy-3-methylbut-2 23.4 2.5E+02 0.0084 23.8 7.1 54 126-185 43-98 (366)
336 2g2q_A Glutaredoxin-2; thiored 23.3 8.5 0.00029 27.5 -1.6 35 110-150 3-37 (124)
337 3ocu_A Lipoprotein E; hydrolas 23.2 85 0.0029 25.2 4.2 37 127-163 102-142 (262)
338 3ihg_A RDME; flavoenzyme, anth 23.1 52 0.0018 28.7 3.1 34 78-115 420-453 (535)
339 1yob_A Flavodoxin 2, flavodoxi 23.0 2.2E+02 0.0075 20.6 7.0 42 104-147 85-126 (179)
340 2z1d_A Hydrogenase expression/ 22.4 1.3E+02 0.0045 25.6 5.2 40 113-152 58-100 (372)
341 3fvv_A Uncharacterized protein 21.9 1.7E+02 0.0058 21.5 5.6 37 127-163 93-129 (232)
342 3s6j_A Hydrolase, haloacid deh 21.6 1.3E+02 0.0044 21.9 4.8 35 129-163 94-128 (233)
343 3kzq_A Putative uncharacterize 21.2 74 0.0025 23.8 3.3 36 112-149 5-40 (208)
344 2p9j_A Hypothetical protein AQ 21.2 2.1E+02 0.0072 19.8 5.8 33 131-163 41-73 (162)
345 3cpq_A 50S ribosomal protein L 20.5 2E+02 0.0068 19.5 5.2 11 180-190 72-82 (110)
346 2jad_A Yellow fluorescent prot 20.2 28 0.00097 29.6 0.7 18 110-129 262-279 (362)
347 3p1v_A Metallo-endopeptidase; 20.1 27 0.00093 30.2 0.6 17 119-135 389-405 (407)
348 3q6o_A Sulfhydryl oxidase 1; p 20.1 2.8E+02 0.0095 20.9 6.6 21 171-191 184-204 (244)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4e-32 Score=220.42 Aligned_cols=129 Identities=46% Similarity=0.717 Sum_probs=122.4
Q ss_pred CCCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhh
Q 028461 76 IPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (208)
Q Consensus 76 ~~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~ 155 (208)
|.++||+++|||+++.+.|.+|++++|+||+|| ++||+|||++|||+|..|++.|++.+++|+++|++||+||+|+.+.
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK-~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~s 99 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGK-YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYS 99 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEEEECGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHH
T ss_pred chhhcCCcCCCCCCcceECCCCcEEehHHhCCC-eEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhh
Confidence 348999999999998777889999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+++|.++.+..+++++++||+++|++++++++|||+.++.|+..|++|||
T Consensus 100 h~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiI 149 (216)
T 3sbc_A 100 LLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFII 149 (216)
T ss_dssp HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEE
T ss_pred HHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEE
Confidence 99999998888888889999999999999999999999999999999997
No 2
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.97 E-value=8e-31 Score=213.20 Aligned_cols=127 Identities=48% Similarity=0.838 Sum_probs=119.5
Q ss_pred CCCCCCCCCeEEeee-cCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhH
Q 028461 78 PLVGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~-~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~ 156 (208)
+++|+++|||++..+ .|.+|++++|+||+|| ++||+|||.+|||+|..|+..|++.+++|++.|++||+||+|+.+.+
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK-~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh 104 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLSSYKGK-WVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAH 104 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTS-EEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCcCCCCcccccccCCCCcEEehHHhCCC-EEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhH
Confidence 689999999997653 3788999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
++|.++++...++.+++||+++|++++++++|||+.++.|+..|++|||
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiI 153 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFII 153 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEE
T ss_pred HHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEE
Confidence 9999998777777789999999999999999999999999999999997
No 3
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.96 E-value=3.3e-30 Score=199.12 Aligned_cols=119 Identities=34% Similarity=0.600 Sum_probs=102.3
Q ss_pred CCCCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChh
Q 028461 75 EIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF 154 (208)
Q Consensus 75 ~~~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~ 154 (208)
++ +++|+++|+|+++ +.+|++++|+|++|| ++||+||+++|||+|+.|++.|++++++++++|+++++||.|+++
T Consensus 2 ~~-l~vG~~aPdF~l~---~~~G~~~~l~d~~Gk-~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~ 76 (157)
T 4g2e_A 2 HM-VEIGELAPDFELP---DTELKKVKLSALKGK-VVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPF 76 (157)
T ss_dssp CC-CCTTSBCCCCEEE---BTTSCEEEGGGGTTS-CEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHH
T ss_pred Cc-CCCCCCCcCeEeE---CCCCCEEeHHHHCCC-eEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchh
Confidence 56 8999999999998 889999999999998 899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCC-----cccceEEEE
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQV-----KKSLLIFTW 205 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g-----~~~r~~fvv 205 (208)
.+++|.+++ +++|++++|++++++++|||.....+ +..|++|||
T Consensus 77 ~~~~~~~~~-------~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflI 125 (157)
T 4g2e_A 77 SNKAFKEHN-------KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVI 125 (157)
T ss_dssp HHHHHHHHT-------TCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEE
T ss_pred HHHHHHHHc-------CCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEE
Confidence 999999998 78999999999999999999754332 356777765
No 4
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.96 E-value=6.1e-30 Score=199.28 Aligned_cols=117 Identities=30% Similarity=0.557 Sum_probs=106.9
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccc--cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDY--IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~--~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~ 155 (208)
+++|+++|+|+++ +.+|++++|+|+ +|| ++||+|||++|||+|+.|++.|++++++|+++|+++++||.|+++.
T Consensus 5 l~vG~~aPdF~l~---~~~G~~v~Lsd~~~~Gk-~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~ 80 (164)
T 4gqc_A 5 VELGEKAPDFTLP---NQDFEPVNLYEVLKRGR-PAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWC 80 (164)
T ss_dssp CCTTSBCCCCEEE---BTTSCEEEHHHHHHTSS-CEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHH
T ss_pred ccCCCCCcCcEeE---CCCCCEEEHHHHhcCCC-EEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHH
Confidence 8999999999998 889999999999 787 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCC----CcccceEEEE
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ----VKKSLLIFTW 205 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~----g~~~r~~fvv 205 (208)
+++|.+++ +++||+++|++++++++|||+..+. ++..|++|||
T Consensus 81 ~~~~~~~~-------~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflI 127 (164)
T 4gqc_A 81 LKKFKDEN-------RLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIV 127 (164)
T ss_dssp HHHHHHHT-------TCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEE
T ss_pred HHHHHHhc-------CcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEE
Confidence 99999998 7899999999999999999975432 2456777775
No 5
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.95 E-value=9e-28 Score=199.76 Aligned_cols=127 Identities=50% Similarity=0.931 Sum_probs=118.2
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|+++++.|.+|++++|+|++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+.++
T Consensus 62 l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK-~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~ 140 (254)
T 3tjj_A 62 AKISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 140 (254)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cCCCCCCCCcEeeeecCCCCcEEeHHHHCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHH
Confidence 8899999999998776888999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+|++++++.+++++++|++++|.++++++.|||+..+.|+..|.+|||
T Consensus 141 ~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflI 188 (254)
T 3tjj_A 141 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFII 188 (254)
T ss_dssp HHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEE
T ss_pred HHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEE
Confidence 999998777777678999999999999999999987778778888876
No 6
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.95 E-value=1e-27 Score=188.67 Aligned_cols=121 Identities=21% Similarity=0.329 Sum_probs=107.5
Q ss_pred CCCCCCCCCCCCeEEeeecCCCCceEeccc-ccCCcEEEEEEEcCCCCCCCh-hhHHHHHHHHHHHhhCCeEEEE-EeCC
Q 028461 75 EIPPLVGNTAPDFAAEAVFDQEFINVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEFEKLNTEILG-VSTD 151 (208)
Q Consensus 75 ~~~~~vG~~~P~f~l~~~~~~~g~~v~Lsd-~~gk~~vlL~f~~~t~Cp~C~-~~~~~l~~~~~~~~~~gv~vi~-Vs~d 151 (208)
..++++|+++|+|+++ .+.+|+.++|+| ++|| ++||+|||++|||+|+ .|+|.|++++++|+++|++||+ ||.|
T Consensus 12 ~~~~~vG~~aPdf~l~--~~~~g~~v~L~d~~~gk-~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D 88 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVF--EGEPGNKVNLAELFKGK-KGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN 88 (173)
T ss_dssp -CCCCTTCBCCCCEEE--CSSTTCEEEHHHHTTTS-EEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCCCCCCCCCCCeEee--eCCCCCEEEhHHHhCCC-cEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC
Confidence 4458999999999997 367889999999 5887 8899999999999999 6999999999999999999997 9999
Q ss_pred ChhhHHHHHHHhhhcCCCCCCc--ceEEEcCccHHHHHhCCccCCC-----C--cccceEEEE
Q 028461 152 SVFSHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPDQ-----V--KKSLLIFTW 205 (208)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~v~~~~gV~~~~~-----g--~~~r~~fvv 205 (208)
+++.+++|.+++ +++ |++++|++++++++|||..++. | ...|.+|||
T Consensus 89 ~~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvI 144 (173)
T 3mng_A 89 DAFVTGEWGRAH-------KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVV 144 (173)
T ss_dssp CHHHHHHHHHHT-------TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEE
T ss_pred CHHHHHHHHHHh-------CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEE
Confidence 999999999998 565 9999999999999999997643 2 467999987
No 7
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.95 E-value=2e-27 Score=195.97 Aligned_cols=127 Identities=54% Similarity=0.938 Sum_probs=117.3
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|+++++.|.+|++++|+|++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+++.++
T Consensus 48 l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk-~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~ 126 (240)
T 3qpm_A 48 AKISKPAPQWEGTAVINGEFKELKLSDYRGK-YLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHL 126 (240)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCCCCCCCcEeeeeeCCCCcEEEHHHhCCC-EEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 8899999999998766788999999999998 999999988999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+|.+++++..++++++|++++|.++++++.||+...+.|+..|.+|||
T Consensus 127 ~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flI 174 (240)
T 3qpm_A 127 AWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFII 174 (240)
T ss_dssp HHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEE
T ss_pred HHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEE
Confidence 999998777666678999999999999999999987777777888775
No 8
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.94 E-value=1.6e-27 Score=189.34 Aligned_cols=122 Identities=17% Similarity=0.238 Sum_probs=106.4
Q ss_pred CCCCCCCCCCCCeEEeeecCCCC-ceEeccc-ccCCcEEEEEEEcCCCCCCChh-hHHHHHHHHHHHhhCCeE-EEEEeC
Q 028461 75 EIPPLVGNTAPDFAAEAVFDQEF-INVKLSD-YIGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEFEKLNTE-ILGVST 150 (208)
Q Consensus 75 ~~~~~vG~~~P~f~l~~~~~~~g-~~v~Lsd-~~gk~~vlL~f~~~t~Cp~C~~-~~~~l~~~~~~~~~~gv~-vi~Vs~ 150 (208)
.+.+++|+++|+|+++++ ..+| ++++|+| ++|| ++||+||+++|||+|+. |+|.|++++++|+++|++ ||+||.
T Consensus 23 ~~~l~vG~~aPdf~l~~~-~~~G~~~v~L~d~~~Gk-~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~ 100 (184)
T 3uma_A 23 MMTIAVGDKLPNATFKEK-TADGPVEVTTELLFKGK-RVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAV 100 (184)
T ss_dssp SSCCCTTCBCCCCEEEEE-ETTEEEEEEHHHHHTTS-EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEES
T ss_pred cCcCCCCCCCCCcEeecc-cCCCceEEeHHHHhCCC-CEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEEC
Confidence 344899999999999843 1278 8999999 8998 78888888999999999 799999999999999999 999999
Q ss_pred CChhhHHHHHHHhhhcCCCCCCc--ceEEEcCccHHHHHhCCccCC--CCc---ccceEEEE
Q 028461 151 DSVFSHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPD--QVK---KSLLIFTW 205 (208)
Q Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~v~~~~gV~~~~--~g~---~~r~~fvv 205 (208)
|+++.+++|.+++ +++ |++++|++++++++|||..++ .|+ ..|.+|||
T Consensus 101 d~~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiI 155 (184)
T 3uma_A 101 NDLHVMGAWATHS-------GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLV 155 (184)
T ss_dssp SCHHHHHHHHHHH-------TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEE
T ss_pred CCHHHHHHHHHHh-------CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEE
Confidence 9999999999998 666 999999999999999998654 232 46788876
No 9
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.94 E-value=3.8e-27 Score=185.72 Aligned_cols=122 Identities=20% Similarity=0.260 Sum_probs=108.5
Q ss_pred CCCCCCCCCCCCeEEeeecC-------CCCceEecccc-cCCcEEEEEEEcCCCCCCChh-hHHHHHHHHHHHhhCCe-E
Q 028461 75 EIPPLVGNTAPDFAAEAVFD-------QEFINVKLSDY-IGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEFEKLNT-E 144 (208)
Q Consensus 75 ~~~~~vG~~~P~f~l~~~~~-------~~g~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~-~~~~l~~~~~~~~~~gv-~ 144 (208)
.+ +++||++|++++..+.+ ...++++|+|+ +|| ++||+|||++|||+|.. |++.|++.+++|+++|+ +
T Consensus 8 ~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk-~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~ 85 (176)
T 4f82_A 8 HM-IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGK-RVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDE 85 (176)
T ss_dssp CC-CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTC-EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCE
T ss_pred hh-hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCC-eEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCE
Confidence 45 89999999999987755 34478999997 887 89999999999999999 99999999999999999 9
Q ss_pred EEEEeCCChhhHHHHHHHhhhcCCCCCCc--ceEEEcCccHHHHHhCCccCC--CCc---ccceEEEE
Q 028461 145 ILGVSTDSVFSHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPD--QVK---KSLLIFTW 205 (208)
Q Consensus 145 vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~v~~~~gV~~~~--~g~---~~r~~fvv 205 (208)
|++||+|+++.+++|.+++ +++ |++++|++++++++|||..+. .|+ ..|.+|||
T Consensus 86 VigIS~D~~~~~~~f~~~~-------~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII 146 (176)
T 4f82_A 86 IWCVSVNDAFVMGAWGRDL-------HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI 146 (176)
T ss_dssp EEEEESSCHHHHHHHHHHT-------TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHh-------CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE
Confidence 9999999999999999998 455 999999999999999998764 332 46999987
No 10
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.94 E-value=9.3e-27 Score=182.88 Aligned_cols=121 Identities=20% Similarity=0.266 Sum_probs=106.1
Q ss_pred CCCCCCCCCCeEEeeecCCCCceEecccc-cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeE-EEEEeCCChh
Q 028461 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTE-ILGVSTDSVF 154 (208)
Q Consensus 77 ~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~-vi~Vs~d~~~ 154 (208)
++++|+++|+|++. .+..+++++|+|+ +|| ++||+|||++|||+|..|++.|++.+++|+++|++ |++||+|+++
T Consensus 13 ~~~vGd~aPdf~l~--~~g~~~~v~L~d~~~gk-~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~ 89 (171)
T 2xhf_A 13 PIKVGDIIPDVLVY--EDVPSKSFPIHDVFRGR-KGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPF 89 (171)
T ss_dssp CCCTTCBCCCCEEE--CSSTTCEEETHHHHTTS-EEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHH
T ss_pred cccCcCCCCCeEEe--cCCCCcEEEhHHHhCCC-eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHH
Confidence 38999999999997 2222389999995 887 89999999999999999999999999999999996 9999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCC--C---cccceEEEE
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ--V---KKSLLIFTW 205 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~--g---~~~r~~fvv 205 (208)
++++|.+++ ++. .+|++++|++++++++|||+.++. | ...|.+|||
T Consensus 90 ~~~~w~~~~----~~~-~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvI 140 (171)
T 2xhf_A 90 VMAAWGKTV----DPE-HKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLI 140 (171)
T ss_dssp HHHHHHHHH----CTT-CCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEE
T ss_pred HHHHHHHhc----CCC-CCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEE
Confidence 999999998 331 289999999999999999987652 2 378999987
No 11
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.94 E-value=6.3e-27 Score=189.25 Aligned_cols=127 Identities=50% Similarity=0.912 Sum_probs=112.4
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+.+|+++|+|+++++.+.+|+.++|++++|| ++||+|||++|||+|+.+++.|++++++|+++|++||+||+|+++.++
T Consensus 19 ~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk-~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~ 97 (211)
T 2pn8_A 19 YFQSMPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 97 (211)
T ss_dssp CCSSCBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCCCcCCCeEeecccCCCCcEEEHHHhCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 7899999999998543567899999999998 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+|.+++.+..++.+++|+++.|.++++++.||+...+.|...|.+|||
T Consensus 98 ~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lI 145 (211)
T 2pn8_A 98 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFII 145 (211)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEE
T ss_pred HHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEE
Confidence 999987666555568999999999999999999766556556776665
No 12
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.94 E-value=8.1e-27 Score=180.66 Aligned_cols=120 Identities=23% Similarity=0.329 Sum_probs=106.0
Q ss_pred CCCCCCCCCCeEEeeecCCCC--ceEeccc-ccCCcEEEEEEEcCCCCCCCh-hhHHHHHHHHHHHhhCCeE-EEEEeCC
Q 028461 77 PPLVGNTAPDFAAEAVFDQEF--INVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEFEKLNTE-ILGVSTD 151 (208)
Q Consensus 77 ~~~vG~~~P~f~l~~~~~~~g--~~v~Lsd-~~gk~~vlL~f~~~t~Cp~C~-~~~~~l~~~~~~~~~~gv~-vi~Vs~d 151 (208)
.+++|+++|+|+++.. +.+| ++++|++ ++|| ++||+|||++|||+|+ .|+|.|++++++|+++|++ ||+||+|
T Consensus 3 ~~~~G~~aP~f~l~~~-~~~G~~~~~~l~~~~~gk-~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d 80 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAYF-DEQDQLQEVSVHSLVAGK-KVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN 80 (162)
T ss_dssp CCCTTCBCCCCEEEEE-CTTSCEEEEESHHHHTTS-EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred cCCCCCCCCCeEEEee-cCCCCceeEeHHHHhCCC-cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3789999999998532 6788 9999999 8998 8999999999999999 9999999999999999999 9999999
Q ss_pred ChhhHHHHHHHhhhcCCCCCC--cceEEEcCccHHHHHhCCccCC--CCc---ccceEEEE
Q 028461 152 SVFSHLAWVQTDRKSGGLGDL--KYPLIADITKSISKSYGVLIPD--QVK---KSLLIFTW 205 (208)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~--~f~~l~D~~~~v~~~~gV~~~~--~g~---~~r~~fvv 205 (208)
+++.+++|.+++ ++ +|++++|++++++++||+.... .|+ ..|.+|||
T Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vi 134 (162)
T 1tp9_A 81 DPFVMKAWAKSY-------PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLV 134 (162)
T ss_dssp CHHHHHHHHHTC-------TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEE
T ss_pred CHHHHHHHHHhc-------CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEE
Confidence 999999999988 55 8999999999999999997542 232 36777775
No 13
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.94 E-value=1.1e-26 Score=181.42 Aligned_cols=118 Identities=14% Similarity=0.166 Sum_probs=104.9
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccc-cCCcEEEEEEEcCCCCCCChh-hHHHHHHHHHHHhhCCe-EEEEEeCCChh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDY-IGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEFEKLNT-EILGVSTDSVF 154 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~-~~~~l~~~~~~~~~~gv-~vi~Vs~d~~~ 154 (208)
+++|+++|+|+++ .+.+|+.++|+++ +|| ++||+|||++|||+|+. |+|.|++++++|+++|+ +||+||.|+++
T Consensus 3 l~~G~~aP~f~l~--~~~~G~~v~L~d~~~Gk-~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~ 79 (167)
T 2wfc_A 3 IKEGDKLPAVTVF--GATPNDKVNMAELFAGK-KGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSF 79 (167)
T ss_dssp CCTTCBCCCCEEE--SSSTTCEEEHHHHTTTS-EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHH
T ss_pred CCCCCcCCCcEee--cCCCCcEEeHHHHhCCC-cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHH
Confidence 7899999999996 2678899999998 997 89999999999999999 99999999999999999 99999999999
Q ss_pred hHHHHHHHhhhcCCCCCCc--ceEEEcCccHHHHHhCCccCCC---C--cccceEEEE
Q 028461 155 SHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPDQ---V--KKSLLIFTW 205 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~v~~~~gV~~~~~---g--~~~r~~fvv 205 (208)
.+++|.+++ +++ |++++|++++++++||+..... | ...|.+|||
T Consensus 80 ~~~~~~~~~-------~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI 130 (167)
T 2wfc_A 80 VMDAWGKAH-------GADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI 130 (167)
T ss_dssp HHHHHHHHT-------TCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE
T ss_pred HHHHHHHhc-------CCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE
Confidence 999999998 566 9999999999999999976521 1 245777776
No 14
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.94 E-value=4.3e-26 Score=185.39 Aligned_cols=127 Identities=52% Similarity=0.908 Sum_probs=115.7
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+.+|+++|+|+++++.+.+|+.++|++++|| ++||+|||++|||+|+.+++.|++++++|+++|++||+|++|+.+.++
T Consensus 27 l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk-~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~ 105 (220)
T 1zye_A 27 PAVTQHAPYFKGTAVVSGEFKEISLDDFKGK-YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHL 105 (220)
T ss_dssp CCTTSBCCCCEEEEECSSSEEEEEGGGGTTS-EEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred ccCCCCCCCcEEEeeeCCCCcEEEHHHhCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 8899999999998776788999999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+|.+++.+..++.+++|+++.|.++++++.||+...+.|...|.+||+
T Consensus 106 ~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~li 153 (220)
T 1zye_A 106 AWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFII 153 (220)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEE
T ss_pred HHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEE
Confidence 999988776666678999999999999999999876667667777665
No 15
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.94 E-value=4.3e-26 Score=185.85 Aligned_cols=123 Identities=46% Similarity=0.785 Sum_probs=108.4
Q ss_pred CCCCCCCCCeEEeeecCC--CC--ceEecccc-cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 78 PLVGNTAPDFAAEAVFDQ--EF--INVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~--~g--~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
+++|+++|+|+++ +. +| +.++|+++ +|| ++||+|||++|||+|+.++|.|++++++|+++|++||+||+|+
T Consensus 25 l~~G~~aP~F~l~---~~~~~G~~~~v~L~d~~~Gk-~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~ 100 (221)
T 2c0d_A 25 SLVTKKAYNFTAQ---GLNKNNEIINVDLSSFIGQK-YCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDS 100 (221)
T ss_dssp -CTTSBCCCCEEE---EECTTSCEEEEEGGGGTTTC-EEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCCCCCCCeEEe---ccccCCCccEEeHHHHcCCC-eEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 7899999999998 55 78 89999999 998 8999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 153 VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
++.+++|.++..+..++++++|+++.|.++++++.||+. .+.|...|.+|||
T Consensus 101 ~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~g~~~P~~~lI 152 (221)
T 2c0d_A 101 VYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDNSFALRGLFII 152 (221)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETTTEECEEEEEE
T ss_pred HHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccCCCccceEEEE
Confidence 999999999876655555688999999999999999997 5555556666654
No 16
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.93 E-value=2.2e-26 Score=189.07 Aligned_cols=124 Identities=28% Similarity=0.501 Sum_probs=107.9
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|++. +.+| +++|+|++|++++||+|||++|||+|+.|++.|++++++|+++|++||+||+|+.+.++
T Consensus 3 l~iG~~aPdF~l~---~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~ 78 (233)
T 2v2g_A 3 ITLGEVFPNFEAD---STIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHK 78 (233)
T ss_dssp CCTTCBCCCCEEE---ETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCCCCCCcEEe---cCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHH
Confidence 7899999999998 6678 89999999977999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCC-CCcceEEEcCccHHHHHhCCccCC----C--CcccceEEEE
Q 028461 158 AWVQTDRKSGGLG-DLKYPLIADITKSISKSYGVLIPD----Q--VKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~-~~~f~~l~D~~~~v~~~~gV~~~~----~--g~~~r~~fvv 205 (208)
+|.+..++..+.+ +++||+++|.++++++.||+...+ . +...|++|||
T Consensus 79 ~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiI 133 (233)
T 2v2g_A 79 EWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFII 133 (233)
T ss_dssp HHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEE
T ss_pred HHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEE
Confidence 9999765432221 578999999999999999997532 1 3457888876
No 17
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.93 E-value=1.1e-25 Score=174.02 Aligned_cols=115 Identities=26% Similarity=0.410 Sum_probs=104.3
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|++. +.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++| +|++||+|+.|+++.++
T Consensus 16 ~~~G~~~P~f~l~---~~~G~~v~l~~~~gk-~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~ 89 (163)
T 1psq_A 16 LQVGDKALDFSLT---TTDLSKKSLADFDGK-KKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQK 89 (163)
T ss_dssp CCTTSBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHH
T ss_pred CCCCCCCCCEEEE---cCCCcEeeHHHhCCC-EEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHH
Confidence 8899999999998 889999999999998 89999998899999999999999999999 69999999999999999
Q ss_pred HHHHHhhhcCCCCCC-cceEEEc-CccHHHHHhCCccCCCCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDL-KYPLIAD-ITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~-~f~~l~D-~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+|.+++ ++ +|+++.| .++++++.||+...+.|+..+.+|||
T Consensus 90 ~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~li 132 (163)
T 1psq_A 90 RWCGAE-------GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVL 132 (163)
T ss_dssp HHHHHH-------TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEE
T ss_pred HHHHhc-------CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEE
Confidence 999998 67 8999999 89999999999865545545666664
No 18
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.93 E-value=1.1e-25 Score=182.99 Aligned_cols=128 Identities=52% Similarity=0.858 Sum_probs=115.0
Q ss_pred CCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhH
Q 028461 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (208)
Q Consensus 77 ~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~ 156 (208)
.+++|+++|+|+++++.|.+|++++|++++|| ++||+||+++||++|+.+++.|++++++|+++|++||+|++|+.+..
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk-~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~ 117 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSH 117 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHhCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 38999999999998665678899999999998 89999997799999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
++|.+.+++..++.+++|+++.|.++++++.|||.....|+..+.+|||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lI 166 (222)
T 3ztl_A 118 LAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFII 166 (222)
T ss_dssp HHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEE
T ss_pred HHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEE
Confidence 9999988776666678999999999999999999877777667777765
No 19
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.93 E-value=2.1e-25 Score=178.42 Aligned_cols=127 Identities=48% Similarity=0.833 Sum_probs=112.8
Q ss_pred CCCCCCCCCeEEeeec-CCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhH
Q 028461 78 PLVGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~-~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~ 156 (208)
+.+|+++|+|++++.. +.+|+.++|++++|| ++||+|||++|||+|+.+++.|++++++|+++|++||+|++|+.+.+
T Consensus 6 ~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk-~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~ 84 (202)
T 1uul_A 6 AEDLHPAPDFNETALMPNGTFKKVALTSYKGK-WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSH 84 (202)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTS-EEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred ccCCCcCCCcEeeeeecCCCccEEEHHHhCCC-eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 7899999999998542 233389999999997 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
++|.+++.+..++.+++|+++.|.++++++.||+...+.|...|.+||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~li 133 (202)
T 1uul_A 85 LAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFII 133 (202)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEE
T ss_pred HHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEE
Confidence 9999988766666678999999999999999999877667677777765
No 20
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.93 E-value=1e-25 Score=182.41 Aligned_cols=123 Identities=46% Similarity=0.772 Sum_probs=111.4
Q ss_pred CCCCCCCCCeEEeeecCC--CC--ceEecccc-cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 78 PLVGNTAPDFAAEAVFDQ--EF--INVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~--~g--~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
+.+|+++|+|+++ +. +| +.++|+++ +|| ++||+|||++|||+|+.+++.|++++++|+++|++||+|++|+
T Consensus 21 l~~G~~aP~f~l~---~~~~~G~~~~v~l~d~~~gk-~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~ 96 (213)
T 2i81_A 21 TYVGKEAPFFKAE---AVFGDNSFGEVNLTQFIGKK-YVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDS 96 (213)
T ss_dssp CCBTSBCCCCEEE---EECTTSCEEEEEGGGGTTTC-EEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred ccCCCcCCCeEee---ccccCCceeEEeHHHHcCCC-eEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 7899999999998 44 68 89999999 997 8999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 153 VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
++.+++|.++.++..++++++|+++.|.++++++.|||.. +.|+..|.+|||
T Consensus 97 ~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-~~g~~~p~~~lI 148 (213)
T 2i81_A 97 KYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-DDSVSLRAFVLI 148 (213)
T ss_dssp HHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECEEEEEE
T ss_pred HHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcc-ccCCcccEEEEE
Confidence 9999999998877767767899999999999999999986 456667777765
No 21
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.93 E-value=1.3e-25 Score=172.64 Aligned_cols=116 Identities=22% Similarity=0.369 Sum_probs=105.0
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCC-cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk-~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~ 156 (208)
+++|+++|+|++. +.+|++++|++++|| +++||+||+++|||+|+.+++.|++++++|+++| +||+|++|+++.+
T Consensus 7 ~~~G~~~P~f~l~---~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~ 82 (159)
T 2a4v_A 7 LEIGDPIPDLSLL---NEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQ 82 (159)
T ss_dssp CCTTCBCCSCEEE---CTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHH
T ss_pred CCCCCCCCCeEEE---CCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHH
Confidence 7899999999998 889999999999986 3799999999999999999999999999999989 9999999999999
Q ss_pred HHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCC-CCcccceEEEE
Q 028461 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD-QVKKSLLIFTW 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~-~g~~~r~~fvv 205 (208)
++|.+++ +++|+++.|.++++++.||+...+ .| ..|.+|||
T Consensus 83 ~~~~~~~-------~~~~~~l~D~~~~~~~~~gv~~~p~~g-~~~~~~li 124 (159)
T 2a4v_A 83 KKFQSKQ-------NLPYHLLSDPKREFIGLLGAKKTPLSG-SIRSHFIF 124 (159)
T ss_dssp HHHHHHH-------TCSSEEEECTTCHHHHHHTCBSSSSSC-BCCEEEEE
T ss_pred HHHHHHh-------CCCceEEECCccHHHHHhCCcccccCC-ccceEEEE
Confidence 9999998 789999999999999999998655 23 46666665
No 22
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.93 E-value=7.1e-26 Score=178.17 Aligned_cols=106 Identities=30% Similarity=0.467 Sum_probs=100.5
Q ss_pred CCCCCC----CCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 78 PLVGNT----APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 78 ~~vG~~----~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
+++|+. +|+|+++ +.+|++++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+|+.|++
T Consensus 21 l~~Gd~ig~~aP~f~l~---~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~ 96 (179)
T 3ixr_A 21 MNIGDTLNHSLLNHPLM---LSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSV 96 (179)
T ss_dssp SCTTCBCCHHHHHCCEE---EGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCH
T ss_pred cCcCcccCCcCCCeeEE---CCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 889999 9999998 788999999999998 99999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCC
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~ 194 (208)
+..++|.+++ +++|+++.|.++++++.||++..+
T Consensus 97 ~~~~~~~~~~-------~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 97 KSHDSFCAKQ-------GFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp HHHHHHHHHH-------TCCSCEEECTTCHHHHHTTCEEEE
T ss_pred HHHHHHHHHc-------CCceEEEECCchHHHHHcCCcccc
Confidence 9999999998 789999999999999999997543
No 23
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.93 E-value=5.6e-26 Score=180.17 Aligned_cols=120 Identities=17% Similarity=0.304 Sum_probs=103.2
Q ss_pred CCCCCCCCCeEEeeecC--------CCC----ceEeccc-ccCCcEEEEEEEcCCCCCCCh-hhHHHHHHHHHHH-hhCC
Q 028461 78 PLVGNTAPDFAAEAVFD--------QEF----INVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEF-EKLN 142 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~--------~~g----~~v~Lsd-~~gk~~vlL~f~~~t~Cp~C~-~~~~~l~~~~~~~-~~~g 142 (208)
+++|+++|+|+++++.. .+| +.++|+| ++|| ++||+|||++|||+|. .|++.|++.+++| +++|
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk-~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g 79 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNK-KILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN 79 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTC-EEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCC-cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 47899999999984211 156 7999999 5887 8999999999999999 9999999999999 9999
Q ss_pred eE-EEEEeCCChhhHHHHHHHhhhcCCCCCC-cceEEEcCccHHHHHhCCccCC--CCc---ccceEEEE
Q 028461 143 TE-ILGVSTDSVFSHLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPD--QVK---KSLLIFTW 205 (208)
Q Consensus 143 v~-vi~Vs~d~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~~~~v~~~~gV~~~~--~g~---~~r~~fvv 205 (208)
++ |++||+|+++++++|.+++ ++ +|++++|++++++++||++.++ .|+ ..|.+|||
T Consensus 80 ~~~V~gvS~D~~~~~~~~~~~~-------~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvI 142 (182)
T 1xiy_A 80 FDDIYCITNNDIYVLKSWFKSM-------DIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIV 142 (182)
T ss_dssp CSEEEEEESSCHHHHHHHHHHT-------TCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEE
T ss_pred CcEEEEEeCCCHHHHHHHHHHc-------CCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEE
Confidence 95 9999999999999999998 44 6999999999999999998654 232 57999887
No 24
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.93 E-value=1.1e-25 Score=173.24 Aligned_cols=105 Identities=28% Similarity=0.448 Sum_probs=100.0
Q ss_pred CCCCCCCCCeE--EeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhh
Q 028461 78 PLVGNTAPDFA--AEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (208)
Q Consensus 78 ~~vG~~~P~f~--l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~ 155 (208)
+++|+++|+|+ +. +.+|+++++++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+|++|+++.
T Consensus 7 l~~G~~~P~f~~~l~---~~~G~~~~l~~~~gk-~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~ 82 (163)
T 3gkn_A 7 AVLELPAATFDLPLS---LSGGTQTTLRAHAGH-WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKS 82 (163)
T ss_dssp CCCCCCGGGGGCCEE---CSTTCEECSGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred cccCCcCCCcccccc---CCCCCEEEHHHhCCC-cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 78999999999 98 889999999999998 8999999779999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccC
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIP 193 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~ 193 (208)
.++|.+++ +++|+++.|.++++++.||+...
T Consensus 83 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 83 HDNFCAKQ-------GFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp HHHHHHHH-------CCSSCEEECTTCHHHHHTTCEEE
T ss_pred HHHHHHHh-------CCCceEEECCcHHHHHHhCCccc
Confidence 99999998 78999999999999999999753
No 25
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.93 E-value=1.5e-25 Score=173.74 Aligned_cols=117 Identities=25% Similarity=0.376 Sum_probs=106.0
Q ss_pred cCCCCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 74 VEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 74 ~~~~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
+.. +++|+++|+|+++ +.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++ +|++||+|+.|++
T Consensus 17 ~~~-l~~G~~aP~f~l~---~~~G~~~~l~~~~Gk-~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~ 88 (166)
T 3p7x_A 17 GQQ-INEGDFAPDFTVL---DNDLNQVTLADYAGK-KKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLP 88 (166)
T ss_dssp SCC-CCTTSBCCCCEEE---CTTSCEEEGGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCH
T ss_pred ccc-CCCCCCCCCeEEE---cCCCCEEeHHHhCCC-cEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCH
Confidence 344 8999999999998 889999999999998 8999999999999999999999999887 6899999999999
Q ss_pred hhHHHHHHHhhhcCCCCCC-cceEEEcC-ccHHHHHhCCccCCCCcccceEEEE
Q 028461 154 FSHLAWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~-~f~~l~D~-~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+.+++|.+++ ++ +|++++|. ++++++.||+...+.|...|.+|||
T Consensus 89 ~~~~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~li 135 (166)
T 3p7x_A 89 FAQKRWCASA-------GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVL 135 (166)
T ss_dssp HHHHHHHHHH-------TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEE
T ss_pred HHHHHHHHHc-------CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEE
Confidence 9999999998 67 89999999 8999999999876666666777665
No 26
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.93 E-value=2.1e-25 Score=182.14 Aligned_cols=124 Identities=31% Similarity=0.559 Sum_probs=108.9
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|++. +.+| +++|+|++|++++||+|++++|||+|+.|++.|++++++|+++|++||+||+|+.+.++
T Consensus 5 l~~G~~aP~F~l~---~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~ 80 (224)
T 1prx_A 5 LLLGDVAPNFEAN---TTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHL 80 (224)
T ss_dssp CCTTCBCCCCEEE---ETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCcCCCCCcEEe---cCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 7899999999998 6778 99999999976888888789999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCC---CCCcceEEEcCccHHHHHhCCccCCC------CcccceEEEE
Q 028461 158 AWVQTDRKSGGL---GDLKYPLIADITKSISKSYGVLIPDQ------VKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~---~~~~f~~l~D~~~~v~~~~gV~~~~~------g~~~r~~fvv 205 (208)
+|.++.++..++ .+++||++.|.++++++.||+...+. ....|++|||
T Consensus 81 ~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiI 137 (224)
T 1prx_A 81 AWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVF 137 (224)
T ss_dssp HHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEE
T ss_pred HHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEE
Confidence 999987665543 47899999999999999999975421 2457888876
No 27
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.93 E-value=2.3e-25 Score=172.65 Aligned_cols=115 Identities=22% Similarity=0.364 Sum_probs=101.8
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|++. +.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++| +|++||+||+|+++.++
T Consensus 17 ~~~G~~~P~f~l~---~~~G~~v~l~~~~gk-~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~ 90 (165)
T 1q98_A 17 PQVGEIVENFILV---GNDLADVALNDFASK-RKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQA 90 (165)
T ss_dssp CCTTCBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHT
T ss_pred CCCCCCCCCeEEE---CCCCCEEehHHhCCC-eEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHH
Confidence 8899999999998 889999999999998 89999999999999999999999999999 69999999999999888
Q ss_pred HHHHHhhhcCCCCCC-cceEEEcC-ccHHHHHhCCccCC---CCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPD---QVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~-~f~~l~D~-~~~v~~~~gV~~~~---~g~~~r~~fvv 205 (208)
+|.+++ ++ +|++++|. ++++++.||+...+ .|...|.+|||
T Consensus 91 ~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~li 136 (165)
T 1q98_A 91 RFCGAE-------GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVL 136 (165)
T ss_dssp TCTTTT-------TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEE
T ss_pred HHHHHc-------CCCceEEeeccccchHHHHhCceecccccCCccceeEEEE
Confidence 898877 67 79999998 89999999997543 23334666654
No 28
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.92 E-value=4.5e-25 Score=170.11 Aligned_cols=105 Identities=33% Similarity=0.526 Sum_probs=99.2
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|++. +.+|+.+++++++||.++||+||+++|||+|+.+++.|++++++|+++|++||+|++|+++..+
T Consensus 2 l~~G~~~P~f~l~---~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 78 (161)
T 3drn_A 2 VKVGDKAPLFEGI---ADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHK 78 (161)
T ss_dssp CCTTSBCCCCEEE---ETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHH
T ss_pred CCCCCcCCCeEee---cCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence 7899999999998 7899999999999984499999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCcc
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLI 192 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~ 192 (208)
+|.+++ +++|+++.|.++++++.|||..
T Consensus 79 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 79 RFKEKY-------KLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp HHHHHT-------TCCSEEEECTTSHHHHHTTCCC
T ss_pred HHHHHh-------CCCceEEECCcHHHHHHcCCCC
Confidence 999998 7889999999999999999963
No 29
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.92 E-value=3e-25 Score=176.76 Aligned_cols=127 Identities=58% Similarity=0.965 Sum_probs=112.5
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+++|+++|+|++.+..+.+|+.++|++++|| ++||+|||++||++|+.+++.|++++++|+++|++||+|++|+.+.++
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 83 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLSDYKGK-YVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHL 83 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHHHHCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 7899999999998432223389999999997 899999999999999999999999999999989999999999999999
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+|++++.+..++.+++|+++.|.++++++.||+...+.+...|.+||+
T Consensus 84 ~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~li 131 (197)
T 1qmv_A 84 AWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFII 131 (197)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEE
T ss_pred HHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEE
Confidence 999998776666678999999999999999999877767677777776
No 30
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.92 E-value=4.4e-25 Score=174.96 Aligned_cols=122 Identities=46% Similarity=0.772 Sum_probs=109.1
Q ss_pred CCCCCCCCeEEeeecCC--CC--ceEecccc-cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 79 LVGNTAPDFAAEAVFDQ--EF--INVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~--~g--~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
++|+++|+|++. +. +| +.++|+++ +|| ++||+|||++|||+|+.+++.|++++++|+++|++||+|++|++
T Consensus 1 ~~G~~aP~f~l~---~~~~~G~~~~~~l~~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~ 76 (192)
T 2h01_A 1 AFQGQAPSFKAE---AVFGDNTFGEVSLSDFIGKK-YVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSK 76 (192)
T ss_dssp CCSSBCCCCEEE---EECTTSCEEEEEGGGGTTTC-EEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred CCCCcCCCcEeE---eeecCCceeEEeHHHHcCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCH
Confidence 479999999998 54 78 89999999 997 99999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+.+++|.+++.+..++.+++|+++.|.++++++.||+.. +.|+..|.+||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-~~g~~~P~~~li 127 (192)
T 2h01_A 77 FTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-NESVALRAFVLI 127 (192)
T ss_dssp HHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECCEEEEE
T ss_pred HHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcC-cCCceeeEEEEE
Confidence 999999998876666667899999999999999999986 445566666665
No 31
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.92 E-value=2e-25 Score=183.08 Aligned_cols=118 Identities=22% Similarity=0.342 Sum_probs=104.5
Q ss_pred CCCCCCCCCeEEeeecCCCCc--eEeccc-ccCCcEEEEEEEcCCCCCCCh-hhHHHHHHHHHHHhhCCe-EEEEEeCCC
Q 028461 78 PLVGNTAPDFAAEAVFDQEFI--NVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEFEKLNT-EILGVSTDS 152 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~--~v~Lsd-~~gk~~vlL~f~~~t~Cp~C~-~~~~~l~~~~~~~~~~gv-~vi~Vs~d~ 152 (208)
+++|+++|+|++++. .+|+ .++|++ ++|| ++||+|||++|||+|+ .|+|.|++++++|+++|+ +||+||.|+
T Consensus 3 ~~~G~~aP~f~l~~~--~~g~~~~v~l~~~~~gk-~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~ 79 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTR--QGDKWVDVTTSELFDNK-TVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVND 79 (241)
T ss_dssp CCTTSBCCCCEEEEE--ETTEEEEEEHHHHHTTS-EEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred ccCCCCCCCeEEEcc--cCCCceeecHHHHhCCC-eEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCC
Confidence 789999999999832 2566 899999 8998 8999999999999999 999999999999999999 999999999
Q ss_pred hhhHHHHHHHhhhcCCCCCCc-ceEEEcCccHHHHHhCCccCCC--Cc---ccceEEEE
Q 028461 153 VFSHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSYGVLIPDQ--VK---KSLLIFTW 205 (208)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~v~~~~gV~~~~~--g~---~~r~~fvv 205 (208)
++.+++|.+++ +++ |++++|++++++++||+...+. |+ ..|.+||+
T Consensus 80 ~~~~~~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li 131 (241)
T 1nm3_A 80 TFVMNAWKEDE-------KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV 131 (241)
T ss_dssp HHHHHHHHHHT-------TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE
T ss_pred HHHHHHHHHhc-------CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE
Confidence 99999999998 565 9999999999999999986542 33 45777776
No 32
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.92 E-value=2.7e-25 Score=175.93 Aligned_cols=120 Identities=32% Similarity=0.601 Sum_probs=104.5
Q ss_pred CCCCCCCCeEEeeecCC-CC--ceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhh
Q 028461 79 LVGNTAPDFAAEAVFDQ-EF--INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~-~g--~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~ 155 (208)
++|+++|+|+++ +. +| +.++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+|++|+++.
T Consensus 2 ~~G~~aP~f~l~---~~~~G~~~~v~l~~~~Gk-~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~ 77 (186)
T 1n8j_A 2 LINTKIKPFKNQ---AFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFT 77 (186)
T ss_dssp CTTCBCCCCEEE---EEETTEEEEEEHHHHTTS-EEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCcCCCcEee---cccCCcceEEEHHHHCCC-eEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 589999999998 44 47 89999999997 8999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+++|.+++. ++.+++|++++|.++++++.||+...+.|+..|.+|||
T Consensus 78 ~~~~~~~~~---~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lI 124 (186)
T 1n8j_A 78 HKAWHSSSE---TIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVV 124 (186)
T ss_dssp HHHHHHHCT---TGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEE
T ss_pred HHHHHHHcC---cccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEE
Confidence 999998762 22257899999999999999999865555556666664
No 33
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.92 E-value=3.7e-25 Score=177.46 Aligned_cols=119 Identities=24% Similarity=0.403 Sum_probs=105.9
Q ss_pred ccCCCCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 73 SVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 73 ~~~~~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
.+.. +++|+++|+|+++ |.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++| +|++||+||.|+
T Consensus 48 ~~~~-l~~G~~aPdf~l~---d~~G~~v~L~d~~Gk-~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~ 120 (200)
T 3zrd_A 48 AGKL-PQIGDKAKDFTLV---AKDLSDVALSSFAGK-RKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDL 120 (200)
T ss_dssp ESCC-CCTTCBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSC
T ss_pred eccc-CCCCCCCCCeEEE---CCCCCEEcHHHhCCC-cEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCC
Confidence 3445 8999999999998 889999999999998 89999999999999999999999999999 689999999999
Q ss_pred hhhHHHHHHHhhhcCCCCCC-cceEEEcC-ccHHHHHhCCccCC---CCcccceEEEE
Q 028461 153 VFSHLAWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPD---QVKKSLLIFTW 205 (208)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~-~f~~l~D~-~~~v~~~~gV~~~~---~g~~~r~~fvv 205 (208)
++..++|.+++ ++ +|++++|. ++++++.||+...+ .|+..|.+|||
T Consensus 121 ~~~~~~~~~~~-------~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lI 171 (200)
T 3zrd_A 121 PFAQSRFCGAE-------GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVL 171 (200)
T ss_dssp HHHHTTCTTTT-------TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEE
T ss_pred HHHHHHHHHHc-------CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEE
Confidence 99999998887 77 99999999 99999999998654 34445676665
No 34
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.92 E-value=6.3e-25 Score=179.16 Aligned_cols=116 Identities=19% Similarity=0.203 Sum_probs=103.6
Q ss_pred ccCCCCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCCh-----hhHHHHHHHHHHHhhCCeEEEE
Q 028461 73 SVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCP-----TEITAFSDRYTEFEKLNTEILG 147 (208)
Q Consensus 73 ~~~~~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~-----~~~~~l~~~~~~~~~~gv~vi~ 147 (208)
.+.. +++|+++|+|+++ +.+|+.++|+|++|| ++||+|||+.|||+|. .+++.|.++ | +|++||+
T Consensus 18 ~g~~-l~vG~~APdFtL~---d~~G~~vsLsd~~Gk-~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~Vvg 87 (224)
T 3keb_A 18 IGDF-PRKGDYLPSFMLV---DDQKHDAALESFSHT-PKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIV 87 (224)
T ss_dssp BSCC-CCTTCBCCCCEEE---ETTSCEEEGGGGTTC-CEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEE
T ss_pred ecCc-CCCCCCCCCeEEE---CCCCCEEeHHHhCCC-cEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEE
Confidence 3445 8999999999998 788999999999998 8999999888899999 999998887 4 6899999
Q ss_pred EeCCChhhHHHHHHHhhhcCCCCCC-cceEEEcC-ccHHHHHhCCccCC---CCcccceEEEE
Q 028461 148 VSTDSVFSHLAWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPD---QVKKSLLIFTW 205 (208)
Q Consensus 148 Vs~d~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~-~~~v~~~~gV~~~~---~g~~~r~~fvv 205 (208)
||+|+++.+++|.+++ ++ +|++++|. ++++++.|||+.++ .|+..|.+|||
T Consensus 88 IS~Ds~~~~~~f~~~~-------gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvI 143 (224)
T 3keb_A 88 ITVDSPSSLARARHEH-------GLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILA 143 (224)
T ss_dssp EESSCHHHHHHHHHHH-------CCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEE
T ss_pred EECCCHHHHHHHHHHc-------CCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEE
Confidence 9999999999999998 66 69999998 69999999998765 46678888886
No 35
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.92 E-value=1.7e-25 Score=182.15 Aligned_cols=123 Identities=26% Similarity=0.444 Sum_probs=106.6
Q ss_pred CCCCCCCCCeEEeeecCC--CCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhh
Q 028461 78 PLVGNTAPDFAAEAVFDQ--EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~--~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~ 155 (208)
+++|+++|+|++. +. +| +++|+|++||+++||+|++++|||+|+.|++.|++++++|+++|++||+||+|+.+.
T Consensus 3 l~iG~~aP~F~l~---~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~ 78 (220)
T 1xcc_A 3 YHLGATFPNFTAK---ASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKES 78 (220)
T ss_dssp CCTTCBCCCCEEC---BTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred CCCCCCCCCcEee---cccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHH
Confidence 7899999999998 55 78 899999999768888887899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhc-CCCCCCcceEEEcCccHHHHHhCCccCCC------CcccceEEEE
Q 028461 156 HLAWVQTDRKS-GGLGDLKYPLIADITKSISKSYGVLIPDQ------VKKSLLIFTW 205 (208)
Q Consensus 156 ~~~~~~~~~~~-~~~~~~~f~~l~D~~~~v~~~~gV~~~~~------g~~~r~~fvv 205 (208)
+++|.+..++. ++ .+++||+++|.++++++.||+...+. +...|++|||
T Consensus 79 ~~~~~~~i~~~~~~-~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flI 134 (220)
T 1xcc_A 79 HDKWIEDIKYYGKL-NKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFI 134 (220)
T ss_dssp HHHHHHHHHHHHTC-SCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEE
T ss_pred HHHHHHHHHHHhcC-CCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEE
Confidence 99999976543 12 27899999999999999999975421 2457888876
No 36
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.92 E-value=7.9e-25 Score=170.31 Aligned_cols=117 Identities=19% Similarity=0.251 Sum_probs=103.6
Q ss_pred cCCCCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 74 VEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 74 ~~~~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
+.. +++|+++|+|++. +.+|+.+++++++|| ++||+||+++|||+|+.+++.|++++++| +|++||+|++|++
T Consensus 18 ~~~-l~~g~~~P~f~l~---~~~G~~~~l~~~~gk-~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~ 90 (171)
T 2yzh_A 18 GPE-LKVGDRAPEAVVV---TKDLQEKIVGGAKDV-VQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLP 90 (171)
T ss_dssp SCC-CCTTSBCCCEEEE---ETTSCEEEESSCCSS-EEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCH
T ss_pred CCc-CCCCCcCCceEEE---CCCCCEeeHHHhCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCH
Confidence 344 8999999999998 788999999999998 89999999999999999999999999999 6999999999999
Q ss_pred hhHHHHHHHhhhcCCCCCC-cceEEEc-CccHHHHHhCCccCC---CCcccceEEEE
Q 028461 154 FSHLAWVQTDRKSGGLGDL-KYPLIAD-ITKSISKSYGVLIPD---QVKKSLLIFTW 205 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~-~f~~l~D-~~~~v~~~~gV~~~~---~g~~~r~~fvv 205 (208)
+.+++|.+++ ++ +|+++.| .++++ +.||+...+ .|+..+.+|||
T Consensus 91 ~~~~~~~~~~-------~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~li 139 (171)
T 2yzh_A 91 FAQKRFCESF-------NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFII 139 (171)
T ss_dssp HHHHHHHHHT-------TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEE
T ss_pred HHHHHHHHHc-------CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEE
Confidence 9999999988 67 8999999 88999 999998654 24445666665
No 37
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.92 E-value=7.7e-25 Score=181.54 Aligned_cols=122 Identities=34% Similarity=0.686 Sum_probs=109.4
Q ss_pred CCCCCCCCCeEEeeecCCCCceEec-ccc--cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKL-SDY--IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF 154 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~L-sd~--~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~ 154 (208)
+.+|+++|+|++. +.+| +++| +|+ +|| ++||+|++++|||+|..+++.|++++++|+++|++||+||+|+.+
T Consensus 5 ~~iG~~aPdF~l~---~~~G-~v~l~~d~l~~GK-~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~ 79 (249)
T 3a2v_A 5 PLIGERFPEMEVT---TDHG-VIKLPDHYVSQGK-WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 79 (249)
T ss_dssp CCTTSBCCCEEEE---ETTE-EEEETHHHHTTTC-EEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred CCCCCCCCCeEEE---cCCC-CEecHHHHhhCCC-EEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHH
Confidence 7899999999998 5566 7999 999 897 888877779999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCc-ccceEEEE
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVK-KSLLIFTW 205 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~-~~r~~fvv 205 (208)
.+.+|.+..++..+. +++||+++|.++++++.|||...+.|. ..|++|||
T Consensus 80 ~~~~w~~~~~~~~~~-~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fII 130 (249)
T 3a2v_A 80 SHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIV 130 (249)
T ss_dssp HHHHHHHHHHHHTCC-CCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEE
T ss_pred HHHHHHHHHHHhcCC-CCceeEEECCchHHHHHhCCccccCCCcccceEEEE
Confidence 999999987766554 789999999999999999998776665 78888876
No 38
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.91 E-value=2.3e-24 Score=165.15 Aligned_cols=118 Identities=33% Similarity=0.561 Sum_probs=106.6
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+.+|+++|+|++. +.+|+.+++++++||+++||+||+++||++|+.+++.|.+++++|+++|++||+|++|+++..+
T Consensus 9 ~~~G~~~p~f~l~---~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~ 85 (160)
T 1xvw_A 9 LNVGATAPDFTLR---DQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHK 85 (160)
T ss_dssp CCTTSBCCCCEEE---CTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHH
T ss_pred CCCCCCCCCeEeE---cCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHH
Confidence 7899999999998 8899999999999976899999889999999999999999999999889999999999999999
Q ss_pred HHHHHhhhcCCCCCCcceEEEcC--ccHHHHHhCCccCCCCcccceEEEE
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADI--TKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~--~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+|.+++ +++|+++.|. ++++++.||+...+.++..|.+||+
T Consensus 86 ~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~li 128 (160)
T 1xvw_A 86 IWATQS-------GFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVV 128 (160)
T ss_dssp HHHHHH-------TCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEE
T ss_pred HHHHhc-------CCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEE
Confidence 999998 7799999995 8999999999865555555566665
No 39
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.91 E-value=6.8e-24 Score=167.27 Aligned_cols=121 Identities=35% Similarity=0.617 Sum_probs=104.9
Q ss_pred CCCCCCCCCeEEeeecCCCCc----eEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFI----NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~----~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
+++|+++|+|++. +.+|+ .++|++++|| ++||+|||++|||+|+.+++.|++++++|+++|++||+|++|++
T Consensus 1 ~~~G~~~P~f~l~---~~~g~~~~~~~~l~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~ 76 (187)
T 1we0_A 1 SLIGTEVQPFRAQ---AFQSGKDFFEVTEADLKGK-WSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTH 76 (187)
T ss_dssp CCTTCBCCCCEEE---EECSSSCCEEEETTTTSSS-EEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred CCCCCcCCCeEEe---ccCCCccceEecHHHHCCC-CEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCH
Confidence 4689999999998 55667 9999999997 99999999999999999999999999999998999999999999
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+..++|.+++.... +++|+++.|.++++++.||+.....|...+.+||+
T Consensus 77 ~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~li 125 (187)
T 1we0_A 77 FVHKAWHENSPAVG---SIEYIMIGDPSQTISRQFDVLNEETGLADRGTFII 125 (187)
T ss_dssp HHHHHHHHSCHHHH---TCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEE
T ss_pred HHHHHHHHHhcccc---CCCceEEECCchHHHHHhCCCcCCCCceeeEEEEE
Confidence 99999998763222 57899999999999999999866555555655554
No 40
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.91 E-value=8.8e-24 Score=168.18 Aligned_cols=123 Identities=43% Similarity=0.688 Sum_probs=106.7
Q ss_pred CCCCCCCCCeEEeeecCC--CCc---eEecccc-cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 78 PLVGNTAPDFAAEAVFDQ--EFI---NVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~--~g~---~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
+++|+++|+|++. +. +|+ .++|+++ +|| ++||+||+++|||+|+.+++.|++++++|+++|++||+|++|
T Consensus 1 ~~~G~~~P~f~l~---~~~~~G~~~~~v~l~~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 76 (198)
T 1zof_A 1 MVVTKLAPDFKAP---AVLGNNEVDEHFELSKNLGKN-GVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID 76 (198)
T ss_dssp CCTTSBCCCCEEE---EECTTSCEEEEEETTTSCCSS-EEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CCCCCcCCceEee---cccCCCcccceEEHHHHhCCC-cEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 4689999999998 55 788 9999999 997 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 152 SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
+++.+++|.++..+..+..+++|+++.|.++++++.||+...+ |...+.+|++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~-g~~~P~~~li 129 (198)
T 1zof_A 77 SEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE-AIALRGAFLI 129 (198)
T ss_dssp CHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT-TEECEEEEEE
T ss_pred CHHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC-CcccceEEEE
Confidence 9999999999865554445889999999999999999998532 4445555554
No 41
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.91 E-value=3.3e-24 Score=167.82 Aligned_cols=111 Identities=16% Similarity=0.234 Sum_probs=91.8
Q ss_pred CCCCCCCCCeEEeeec-CCCC-----ceEecccc-cCCcEEEEEEEcCCCCCCChhh-HHHHHHHHHHHhhCCeE-EEEE
Q 028461 78 PLVGNTAPDFAAEAVF-DQEF-----INVKLSDY-IGKKYVILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLNTE-ILGV 148 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~-~~~g-----~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~~-~~~l~~~~~~~~~~gv~-vi~V 148 (208)
..+|+++|+|++++.. +.+| +.++|+++ +|| ++||+|++++|||+|+.| +|.|++++++|+++|++ |++|
T Consensus 7 ~~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk-~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 7 TDILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDK-KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp ---CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTS-EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred ccccCcCCCeEEecccccccCCccCcceEEHHHHhCCC-CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 3467799999998431 0146 89999996 997 566655559999999998 99999999999999999 9999
Q ss_pred eCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCC
Q 028461 149 STDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD 194 (208)
Q Consensus 149 s~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~ 194 (208)
|.|+++.+++|.+++ ++ .++|++++|+++++++.||+....
T Consensus 86 s~d~~~~~~~~~~~~----~~-~~~fp~l~D~~~~~~~~ygv~~~~ 126 (171)
T 2pwj_A 86 AINDPYTVNAWAEKI----QA-KDAIEFYGDFDGSFHKSLELTTDL 126 (171)
T ss_dssp ESSCHHHHHHHHHHT----TC-TTTSEEEECTTCHHHHHHTCEEEC
T ss_pred eCCCHHHHHHHHHHh----CC-CCceEEEECCccHHHHHhCCcccc
Confidence 999999999999998 22 147999999999999999998643
No 42
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.90 E-value=3.2e-23 Score=164.70 Aligned_cols=123 Identities=36% Similarity=0.659 Sum_probs=104.2
Q ss_pred CCCCCCCCCeEEeeecC----------CCC--ceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEE
Q 028461 78 PLVGNTAPDFAAEAVFD----------QEF--INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEI 145 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~----------~~g--~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~v 145 (208)
+++|+++|+|++++..+ .+| +.++|++++|| ++||+|||++|||+|+.+++.|.+++++|+++|++|
T Consensus 4 l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 4 LTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGK-WRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp CCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTC-EEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred CCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCC-cEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 78999999999985421 026 89999999997 999999999999999999999999999999889999
Q ss_pred EEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 146 LGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 146 i~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
|+|++|+++..++|.+++.. +.+++|+++.|.++++++.||+... .|...+.+||+
T Consensus 83 v~Vs~d~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P~~~li 138 (195)
T 2bmx_A 83 LGVSIDSEFAHFQWRAQHND---LKTLPFPMLSDIKRELSQAAGVLNA-DGVADRVTFIV 138 (195)
T ss_dssp EEEESSCHHHHHHHHHHCTT---GGGCCSCEEECTTSHHHHHHTCBCT-TSSBCEEEEEE
T ss_pred EEEECCCHHHHHHHHHHhcc---ccCCceeEEeCCchHHHHHhCCccc-CCCccceEEEE
Confidence 99999999999999988622 2267899999999999999999854 34445555544
No 43
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.89 E-value=2.9e-23 Score=177.98 Aligned_cols=107 Identities=27% Similarity=0.317 Sum_probs=96.1
Q ss_pred CCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHH
Q 028461 82 NTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQ 161 (208)
Q Consensus 82 ~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~ 161 (208)
.++|+|+|+ +.+|++++|+||+|| ++||+|||++|||+|..|++.|++ .+.+|++|++||.|+++.+++|.+
T Consensus 2 ak~p~F~l~---~~~G~~~~Lsd~~Gk-~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D~~~~~~~f~~ 73 (322)
T 4eo3_A 2 ARVKHFELL---TDEGKTFTHVDLYGK-YTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRDSVEALKRFKE 73 (322)
T ss_dssp CBCCCCEEE---ETTSCEEEGGGTTTS-EEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESCCHHHHHHHHH
T ss_pred CCCCCcEEE---CCCcCEEeHHHhCCC-eEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCCCHHHHHHHHH
Confidence 478999998 889999999999998 899999999999999999998864 234589999999999999999999
Q ss_pred HhhhcCCCCCCcceEEEcCccHHHHHhCCccCCCCcccceEEEE
Q 028461 162 TDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 162 ~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
++ +++||+++|++++++++|||+. .+...|.+|||
T Consensus 74 ~~-------~l~fp~l~D~~~~v~~~ygv~~--~~~~~r~tfiI 108 (322)
T 4eo3_A 74 KN-------DLKVTLLSDPEGILHEFFNVLE--NGKTVRSTFLI 108 (322)
T ss_dssp HH-------TCCSEEEECTTCHHHHHTTCEE--TTEECCEEEEE
T ss_pred hh-------CCceEEEEcCchHHHHhcCCCC--CCcCccEEEEE
Confidence 98 7899999999999999999974 35677888876
No 44
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.89 E-value=3.8e-23 Score=159.71 Aligned_cols=114 Identities=23% Similarity=0.398 Sum_probs=102.0
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCC-CCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDF-TFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~-Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~ 156 (208)
+++|+++|+|++. +.+|+.+++++++|| ++||+|| ++| ||+|+.+++.|++++++| ++++||+|++|+++..
T Consensus 18 ~~~G~~~p~f~l~---~~~G~~~~l~~~~gk-~~vl~F~-~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~ 90 (167)
T 2jsy_A 18 VKVGDQAPDFTVL---TNSLEEKSLADMKGK-VTIISVI-PSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQ 90 (167)
T ss_dssp CCTTSCCCCCEEE---BTTCCEEEHHHHTTS-CEEEEEC-SCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGT
T ss_pred cCCCCcCCceEEE---CCCCCEeeHHHhCCC-eEEEEEe-cCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHH
Confidence 8999999999998 789999999999998 8999999 777 999999999999999999 6899999999999888
Q ss_pred HHHHHHhhhcCCCCCC-cceEEEc-CccHHHHHhCCccCCCCcccceEEEE
Q 028461 157 LAWVQTDRKSGGLGDL-KYPLIAD-ITKSISKSYGVLIPDQVKKSLLIFTW 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~f~~l~D-~~~~v~~~~gV~~~~~g~~~r~~fvv 205 (208)
++|.+++ ++ +|+++.| .++++++.||+...+.|+..+.+|||
T Consensus 91 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~li 134 (167)
T 2jsy_A 91 ARWCGAN-------GIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVL 134 (167)
T ss_dssp SCCGGGS-------SCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEE
T ss_pred HHHHHhc-------CCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEE
Confidence 8898887 66 8999999 88999999999876555555666654
No 45
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.88 E-value=1.8e-22 Score=157.87 Aligned_cols=113 Identities=25% Similarity=0.384 Sum_probs=95.7
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCC-CCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDF-TFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~-Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~ 156 (208)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++| |++|+.++|.|++++++ +|++||+|++|+++..
T Consensus 18 l~~G~~~P~f~l~---~~~G~~v~l~~~~gk-~vvl~F~-~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~ 89 (175)
T 1xvq_A 18 PAVGSPAPAFTLT---GGDLGVISSDQFRGK-SVLLNIF-PSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQ 89 (175)
T ss_dssp CCTTSBCCCCEEE---CTTSCEEEGGGGTTS-CEEEEEC-SCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHH
T ss_pred CCcCCcCCCeEEE---CCCCCEEeHHHcCCC-EEEEEEE-eCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHH
Confidence 8899999999998 889999999999998 8999999 566 99999999999999988 6899999999999989
Q ss_pred HHHHHHhhhcCCCCCC-cceEEEcCccHHHHHhCCccCC---CCcccceEEEE
Q 028461 157 LAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPD---QVKKSLLIFTW 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~f~~l~D~~~~v~~~~gV~~~~---~g~~~r~~fvv 205 (208)
++|.+++ ++ +|+++.|.++++++.||+...+ .|...+.+|||
T Consensus 90 ~~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~li 135 (175)
T 1xvq_A 90 KRFCGAE-------GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVI 135 (175)
T ss_dssp TTCC-------------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEE
T ss_pred HHHHHHc-------CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEE
Confidence 9998887 66 8999999999999999997653 34445666665
No 46
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.87 E-value=3.7e-22 Score=161.62 Aligned_cols=103 Identities=16% Similarity=0.226 Sum_probs=96.5
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC-------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST------- 150 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~------- 150 (208)
+++|+++|+|++. +.+|+.++|++++||.++||+|| ++|||+|+.+++.|++++++|+++|++||+|++
T Consensus 32 l~~G~~aP~f~l~---~~~G~~v~l~~~~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~ 107 (218)
T 3u5r_E 32 ITLGTRAADFVLP---DAGGNLFTLAEFKDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFP 107 (218)
T ss_dssp CCTTCBCCCCCEE---CTTCCEECGGGGTTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCG
T ss_pred CCCCCcCCCcEeE---CCCCCEEeHHHhCCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 8999999999998 88999999999999844999999 899999999999999999999999999999999
Q ss_pred -CChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 151 -DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 151 -d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
|+++..++|.+++ +++|+++.|.++++++.|||.
T Consensus 108 ~d~~~~~~~~~~~~-------~~~~~~l~D~~~~~~~~~~v~ 142 (218)
T 3u5r_E 108 EETLERVGAEVKAY-------GYGFPYLKDASQSVAKAYGAA 142 (218)
T ss_dssp GGSHHHHHHHHHHH-------TCCSCEEECTTCHHHHHHTCC
T ss_pred cCCHHHHHHHHHHh-------CCCccEEECCccHHHHHcCCC
Confidence 5678889999988 789999999999999999985
No 47
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=2.4e-21 Score=146.85 Aligned_cols=102 Identities=17% Similarity=0.316 Sum_probs=94.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecc--cccCCcEEEEEEEcCCCCCC--ChhhHHHHHHHHHHH-hhCCeEEEEEeCCC
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLS--DYIGKKYVILFFYPLDFTFV--CPTEITAFSDRYTEF-EKLNTEILGVSTDS 152 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Ls--d~~gk~~vlL~f~~~t~Cp~--C~~~~~~l~~~~~~~-~~~gv~vi~Vs~d~ 152 (208)
+++|+++|+|++. +.+|+.++|+ +++|| ++||+|| ++||++ |+.++|.|.+++++| +++|++||+|++|+
T Consensus 5 l~~G~~~p~f~l~---~~~g~~~~l~~~~~~gk-~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~ 79 (150)
T 3fw2_A 5 SEIGKYAPFFSLP---NAKGEKITRSSDAFKQK-SLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV 79 (150)
T ss_dssp TSTTSBCCCCCEE---BTTCCEECTTSTTTTTS-EEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS
T ss_pred ccCCCcCCccEeE---CCCCCEEecchhhhCCC-EEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC
Confidence 7899999999998 7899999999 99997 9999999 899999 999999999999999 88899999999986
Q ss_pred h-hhHHHHHHHhhhcCCCCCCcceEEEcC---ccHHHHHhCCc
Q 028461 153 V-FSHLAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVL 191 (208)
Q Consensus 153 ~-~~~~~~~~~~~~~~~~~~~~f~~l~D~---~~~v~~~~gV~ 191 (208)
. +..++|.+++ +++|+++.|. ++++.+.|||.
T Consensus 80 ~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~ 115 (150)
T 3fw2_A 80 DKQQWKDAIKRD-------TLDWEQVCDFGGLNSEVAKQYSIY 115 (150)
T ss_dssp CHHHHHHHHHHT-------TCCSEEECCSCGGGCHHHHHTTCC
T ss_pred CHHHHHHHHHHh-------CCCceEEEcCcccchHHHHHcCCC
Confidence 4 6778888877 7899999998 67999999985
No 48
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.86 E-value=1.5e-21 Score=146.28 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=91.2
Q ss_pred CCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHH---HHHHHhhCCeEEEEEeCC-Chh
Q 028461 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSD---RYTEFEKLNTEILGVSTD-SVF 154 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~---~~~~~~~~gv~vi~Vs~d-~~~ 154 (208)
++|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.++|.|.+ ++++|+++|++|++|++| +.+
T Consensus 2 ~~G~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~ 76 (142)
T 3ewl_A 2 NAGMKAADFTYV---TVHGDNSRMSRLKAQ-YTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENRE 76 (142)
T ss_dssp CTTSBCCCCEEE---CTTCCEEEGGGCCCS-EEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHH
T ss_pred CCCCcCCCCEEE---CCCCCEEEhhhcCCC-EEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHH
Confidence 589999999998 889999999999997 9999999 9999999999999998 999999999999999998 456
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEEcCccHHHH--HhCCc
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISK--SYGVL 191 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~--~~gV~ 191 (208)
..++|.+++ +++|+++.|.++.+.+ .|||.
T Consensus 77 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~ 108 (142)
T 3ewl_A 77 EWATKAVYM-------PQGWIVGWNKAGDIRTRQLYDIR 108 (142)
T ss_dssp HHHHHHTTS-------CTTCEEEECTTCHHHHTTCSCCC
T ss_pred HHHHHHHHc-------CCCcceeeCCccchhhHHHcCCC
Confidence 667777666 7899999999999987 89985
No 49
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.86 E-value=4.7e-21 Score=145.55 Aligned_cols=103 Identities=25% Similarity=0.333 Sum_probs=94.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC-hhhH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~-~~~~ 156 (208)
+++|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++|++|++|+ .+..
T Consensus 3 l~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 77 (152)
T 2lrn_A 3 LATGSVAPAITGI---DLKGNSVSLNDFKGK-YVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDW 77 (152)
T ss_dssp SCTTEECCCCEEE---CSSSCEEESGGGTTS-EEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHH
T ss_pred ccCCCcCCCceeE---cCCCCEEeHHHcCCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHH
Confidence 7899999999998 889999999999997 9999999 99999999999999999999998899999999985 5667
Q ss_pred HHHHHHhhhcCCCCCCcceEEEcC---ccHHHHHhCCcc
Q 028461 157 LAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVLI 192 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~---~~~v~~~~gV~~ 192 (208)
++|.++. +++|+++.|. +.++.+.|||..
T Consensus 78 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (152)
T 2lrn_A 78 KKAIEED-------KSYWNQVLLQKDDVKDVLESYCIVG 109 (152)
T ss_dssp HHHHHHH-------TCCSEEEEECHHHHHHHHHHTTCCS
T ss_pred HHHHHHh-------CCCCeEEecccchhHHHHHHhCCCc
Confidence 7788777 7889999999 789999999853
No 50
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.86 E-value=1.6e-21 Score=146.70 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=88.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC-hhhH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~-~~~~ 156 (208)
+++|+++|+|++ +.+|+.++|++++|| ++||+|| ++||++|+.++|.|++++++|+++|++||+|++|+ .+..
T Consensus 7 l~~G~~~P~f~l----~~~g~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (143)
T 4fo5_A 7 VNPGDLAPRIEF----LGNDAKASFHNQLGR-YTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIF 80 (143)
T ss_dssp SSTTSBCCCCCC---------CCCSCCSSCC-EEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHH
T ss_pred cCCcccCCceEE----cCCCCEEEHHHhCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHH
Confidence 889999999998 357889999999997 9999999 99999999999999999999998899999999984 5677
Q ss_pred HHHHHHhhhcCCCCCCcc-eEEEcCc---cHHHHHhCCcc
Q 028461 157 LAWVQTDRKSGGLGDLKY-PLIADIT---KSISKSYGVLI 192 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f-~~l~D~~---~~v~~~~gV~~ 192 (208)
+++.+++ +++| +++.|.+ +++++.|||..
T Consensus 81 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (143)
T 4fo5_A 81 TETVKID-------KLDLSTQFHEGLGKESELYKKYDLRK 113 (143)
T ss_dssp HHHHHHH-------TCCGGGEEECTTGGGSHHHHHTTGGG
T ss_pred HHHHHHh-------CCCCceeeecccccchHHHHHcCCCC
Confidence 8888887 7889 8999984 68999999853
No 51
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.85 E-value=1.4e-20 Score=142.26 Aligned_cols=103 Identities=21% Similarity=0.285 Sum_probs=94.4
Q ss_pred CCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-Chhh
Q 028461 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-SVFS 155 (208)
Q Consensus 77 ~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d-~~~~ 155 (208)
.+++|+++|+|++. + +|+.+++++++|| ++||+|| ++|||.|..+++.|.+++++|+++|++|++|++| +.+.
T Consensus 2 ~l~~G~~~P~f~l~---~-~g~~~~l~~~~gk-~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 75 (152)
T 3gl3_A 2 SLDKGDKAPDFALP---G-KTGVVKLSDKTGS-VVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGD 75 (152)
T ss_dssp CCCTTSBCCCCEEE---B-SSSEEEGGGGTTS-EEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHH
T ss_pred CCCCCCcCCceEee---C-CCCeEeHHHhCCC-EEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHH
Confidence 37899999999998 6 8889999999998 8999999 9999999999999999999999999999999998 5567
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCcc
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLI 192 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~ 192 (208)
.++|.+++ +++|+++.|.++++.+.||+..
T Consensus 76 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 76 AMKFLAQV-------PAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp HHHHHHHS-------CCCSEEEECTTCHHHHHTTCCS
T ss_pred HHHHHHHc-------CCCCceeECCcchhHHHcCCCC
Confidence 78888887 7899999999999999999853
No 52
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.85 E-value=3.3e-21 Score=144.79 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=89.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHH---HHHHHhhCCeEEEEEeCCCh-
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSD---RYTEFEKLNTEILGVSTDSV- 153 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~---~~~~~~~~gv~vi~Vs~d~~- 153 (208)
..+|+++|+|++. +.+|+.++|++++|| ++||+|| ++||++|+.++|.|.+ ++++|+++|++||+|+.|+.
T Consensus 5 ~~~G~~ap~f~l~---~~~g~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~ 79 (142)
T 3eur_A 5 NRLGTKALNFTYT---LDSGVKGTLYQFPAE-YTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEEL 79 (142)
T ss_dssp TCTTSBCCCCEEE---ETTSCEEETTTCCCS-EEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCH
T ss_pred hcCCCccCCcEEE---cCCCCEeeHHHcCCC-EEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCH
Confidence 6899999999998 788999999999997 9999999 9999999999999999 99999999999999999874
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEEcCccH--HHHHhCCc
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKS--ISKSYGVL 191 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~--v~~~~gV~ 191 (208)
+..+++.+++ +++|+.+.|.++. +.+.|||.
T Consensus 80 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~ 112 (142)
T 3eur_A 80 DEWKKHRNDF-------AKEWTNGYDKELVIKNKNLYDLR 112 (142)
T ss_dssp HHHHHHGGGS-------CTTSEEEECTTCHHHHTTCSCCT
T ss_pred HHHHHHHHhc-------ccccccccCccchhhhhhhcCCC
Confidence 3344444444 6789999999875 78889984
No 53
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.85 E-value=1.2e-20 Score=141.58 Aligned_cols=104 Identities=19% Similarity=0.319 Sum_probs=95.3
Q ss_pred CCCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-Chhh
Q 028461 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-SVFS 155 (208)
Q Consensus 77 ~~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d-~~~~ 155 (208)
++.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|.+++++|+++|++|++|++| +.+.
T Consensus 4 ~~~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 78 (148)
T 3hcz_A 4 PLLLGKKAPNLYMT---DTTGTYRYLYDVQAK-YTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEE 78 (148)
T ss_dssp CCCTTSBCCCCCCB---CTTSCBCCGGGCCCS-EEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHH
T ss_pred ccCCCCcCCceEEe---cCCCCEEEhHHcCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHH
Confidence 37899999999998 788999999999997 8999999 9999999999999999999999989999999998 5678
Q ss_pred HHHHHHHhhhcCCCCCCc-ceEEEcCccH--HHHHhCCcc
Q 028461 156 HLAWVQTDRKSGGLGDLK-YPLIADITKS--ISKSYGVLI 192 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~-f~~l~D~~~~--v~~~~gV~~ 192 (208)
.++|.+++ +++ |+++.|.++. +.+.||+..
T Consensus 79 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~i~~ 111 (148)
T 3hcz_A 79 WLKFIRSK-------KIGGWLNVRDSKNHTDFKITYDIYA 111 (148)
T ss_dssp HHHHHHHH-------TCTTSEEEECTTCCCCHHHHHCCCS
T ss_pred HHHHHHHc-------CCCCceEEeccccchhHHHhcCcCC
Confidence 88899888 666 9999999988 999999853
No 54
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.85 E-value=1.1e-20 Score=146.00 Aligned_cols=101 Identities=16% Similarity=0.243 Sum_probs=90.8
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCC-CChhhHHHHHHHHHHHhhCC--eEEEEEeCC---
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTF-VCPTEITAFSDRYTEFEKLN--TEILGVSTD--- 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp-~C~~~~~~l~~~~~~~~~~g--v~vi~Vs~d--- 151 (208)
+++|+.+|+|++. +.+|+.++|++++|| ++||+|| ++||+ +|+.+++.|.+++++|+++| ++||+|++|
T Consensus 7 l~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~ 81 (174)
T 1xzo_A 7 DPLNYEVEPFTFQ---NQDGKNVSLESLKGE-VWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPEN 81 (174)
T ss_dssp SCCCEECCCCEEE---CTTSCEEETGGGTTC-CEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTT
T ss_pred CccccccCCcEEE---cCCCCEEehhhcCCC-EEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCC
Confidence 7899999999998 889999999999998 8999999 99999 99999999999999999876 999999997
Q ss_pred -ChhhHHHHHHHhhhcCCCCCCcc---eEEEcCccHHHHHhCC
Q 028461 152 -SVFSHLAWVQTDRKSGGLGDLKY---PLIADITKSISKSYGV 190 (208)
Q Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~f---~~l~D~~~~v~~~~gV 190 (208)
+++.+++|.+++ +++| +++.|.++++.+.|++
T Consensus 82 d~~~~~~~~~~~~-------~~~~~~~~~l~d~~~~~~~~~~~ 117 (174)
T 1xzo_A 82 DKPKQLKKFAANY-------PLSFDNWDFLTGYSQSEIEEFAL 117 (174)
T ss_dssp CCHHHHHHHHTTS-------CCCGGGEEEEBCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHc-------CCCCcceEEEeCCCHHHHHHHHH
Confidence 467788888876 5566 9999999888888764
No 55
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.84 E-value=2.5e-20 Score=141.21 Aligned_cols=102 Identities=27% Similarity=0.383 Sum_probs=94.7
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC--hhh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS--VFS 155 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~--~~~ 155 (208)
+++|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|.++++++++++++|++|++|. .+.
T Consensus 2 ~~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~ 76 (154)
T 3kcm_A 2 SLEENPAPDFTLN---TLNGEVVKLSDLKGQ-VVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVA 76 (154)
T ss_dssp -CTTSBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHH
T ss_pred CCCCCCCCCeEEE---cCCCCEEehhhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHH
Confidence 5799999999998 889999999999997 8999999 99999999999999999999998899999999987 677
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
.++|.+++ +++|+++.|.++.+.+.||+.
T Consensus 77 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 77 VEEFFRKT-------GFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp HHHHHHHH-------CCCCCEEECTTCHHHHHHTCC
T ss_pred HHHHHHHc-------CCCeeEEecCchHHHHHhCCC
Confidence 88899888 788999999999999999985
No 56
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.84 E-value=2e-20 Score=146.65 Aligned_cols=102 Identities=19% Similarity=0.311 Sum_probs=93.8
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh--hh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV--FS 155 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~--~~ 155 (208)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|++++++|++++++|++|++|.. +.
T Consensus 34 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 108 (186)
T 1jfu_A 34 ASAPLKLPDLAFE---DADGKPKKLSDFRGK-TLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEK 108 (186)
T ss_dssp CCSCCBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTH
T ss_pred ccCCCcCCCcEeE---cCCCCEeeHHHcCCC-EEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHH
Confidence 7899999999998 889999999999998 8999999 999999999999999999999988999999999864 67
Q ss_pred HHHHHHHhhhcCCCCCC-cceEEEcCccHHHHHhCCc
Q 028461 156 HLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVL 191 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-~f~~l~D~~~~v~~~~gV~ 191 (208)
.++|.+++ ++ .|+++.|.++.+.+.||+.
T Consensus 109 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 109 PKTFLKEA-------NLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp HHHHHHHT-------TCCTTCCEECTTCHHHHHHHTT
T ss_pred HHHHHHHc-------CCCCCceEECCcchHHHHhccc
Confidence 88899887 55 5999999999999999985
No 57
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.84 E-value=3.5e-20 Score=145.60 Aligned_cols=101 Identities=15% Similarity=0.215 Sum_probs=94.3
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC-------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST------- 150 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~------- 150 (208)
+.+|+++|+|++. +.+|+.++|++++|| ++||+|| ++||++|+.+++.|++++++|+++ ++||+|++
T Consensus 7 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~ 80 (188)
T 2cvb_A 7 LPLESPLIDAELP---DPRGGRYRLSQFHEP-LLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYP 80 (188)
T ss_dssp CCTTCBCCCCEEE---CTTSCEEEGGGCCSS-EEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCG
T ss_pred CCCCCCCCCceee---cCCCCEEeHHHhCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccc
Confidence 7899999999998 889999999999997 9999999 999999999999999999999987 99999998
Q ss_pred -CChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 151 -DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 151 -d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
|+.+..++|.+++ +++|+++.|.++++++.||+.
T Consensus 81 ~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~ 115 (188)
T 2cvb_A 81 EDAPEKMAAFAEEH-------GIFFPYLLDETQEVAKAYRAL 115 (188)
T ss_dssp GGSHHHHHHHHHHH-------TCCSCEEECSSSHHHHHTTCC
T ss_pred ccCHHHHHHHHHHh-------CCCceEEECCcchHHHHcCCC
Confidence 5667888899988 788999999999999999985
No 58
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.83 E-value=4.9e-20 Score=140.91 Aligned_cols=101 Identities=14% Similarity=0.281 Sum_probs=92.6
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC-hhhH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSH 156 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~-~~~~ 156 (208)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++|++|++|+ .+..
T Consensus 8 ~~~g~~~p~~~l~---~~~g~~~~l~~~~gk-~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~ 82 (165)
T 3or5_A 8 DARPTPAPSFSGV---TVDGKPFSSASLKGK-AYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNV 82 (165)
T ss_dssp CCCCCBCCCCEEE---CTTSCEEEGGGGTTC-EEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHH
T ss_pred hcCCCCCCCceee---CCCCCEechhHcCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHH
Confidence 6899999999998 889999999999997 8999999 99999999999999999999999899999999976 6778
Q ss_pred HHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
++|.+++ +++|+++.|.+ ++.+.|+.+
T Consensus 83 ~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~ 109 (165)
T 3or5_A 83 KNYMKTQ-------GIIYPVMMATP-ELIRAFNGY 109 (165)
T ss_dssp HHHHHHH-------TCCSCEEECCH-HHHHHHHTT
T ss_pred HHHHHHc-------CCCCceEecCH-HHHHHHhhh
Confidence 8899888 78999999975 899999544
No 59
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.83 E-value=3.6e-20 Score=138.83 Aligned_cols=103 Identities=21% Similarity=0.370 Sum_probs=93.4
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecc--cccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHH-hhCCeEEEEEeCCC-h
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLS--DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF-EKLNTEILGVSTDS-V 153 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Ls--d~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~-~~~gv~vi~Vs~d~-~ 153 (208)
+++|+++|+|++. +.+|+.++++ +++|| ++||+|| ++||++|+.+++.|.+++++| +++|++|++|++|+ .
T Consensus 5 ~~~g~~~p~~~l~---~~~g~~~~l~~~~~~gk-~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 79 (148)
T 3fkf_A 5 VTVGKSAPYFSLP---NEKGEKLSRSAERFRNR-YLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDR 79 (148)
T ss_dssp CCTTSBCCCCCEE---BTTSCEECTTSTTTTTS-EEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCH
T ss_pred ccCCCcCCCeEee---CCCCCEEeccccccCCc-EEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCH
Confidence 7899999999998 7899999999 99997 9999999 999999999999999999999 88899999999985 4
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEEcC---ccHHHHHhCCcc
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVLI 192 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~---~~~v~~~~gV~~ 192 (208)
+..++|.+++ +++|+++.|. +..+.+.||+..
T Consensus 80 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~~ 114 (148)
T 3fkf_A 80 EAWETAIKKD-------TLSWDQVCDFTGLSSETAKQYAILT 114 (148)
T ss_dssp HHHHHHHHHT-------TCCSEEECCSCGGGCHHHHHTTCCS
T ss_pred HHHHHHHHHc-------CCCceEEEccCCcchHHHHhcCCCC
Confidence 5677777776 7899999999 679999999853
No 60
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.83 E-value=1.5e-20 Score=143.21 Aligned_cols=103 Identities=18% Similarity=0.265 Sum_probs=91.7
Q ss_pred CCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhh-HHHHHHHHHHHhhCCeEEEEEeC-------C
Q 028461 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLNTEILGVST-------D 151 (208)
Q Consensus 80 vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~-~~~l~~~~~~~~~~gv~vi~Vs~-------d 151 (208)
.|+++|+|++.++. .+|+.+++++++|| ++||+|| ++|||+|+.+ +|.|++++++|+++|++||+|++ +
T Consensus 2 ~g~~aP~f~l~~~~-~~g~~~~l~~~~gk-~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~ 78 (158)
T 3eyt_A 2 NAMKAPELQIQQWF-NSATDLTLADLRGK-VIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAM 78 (158)
T ss_dssp CCEECCCCCEEEEE-SCSSCCCTGGGTTS-EEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGS
T ss_pred CCCcCCCceehhhh-cCCCccCHHHhCCC-EEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccC
Confidence 68999999998421 36789999999998 9999999 8999999997 99999999999988999999996 4
Q ss_pred ChhhHHHHHHHhhhcCCCCCCcceEEEcCcc-----HHHHHhCCcc
Q 028461 152 SVFSHLAWVQTDRKSGGLGDLKYPLIADITK-----SISKSYGVLI 192 (208)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~-----~v~~~~gV~~ 192 (208)
+.+..++|.+++ +++|+++.|.++ ++++.|||..
T Consensus 79 ~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~v~~ 117 (158)
T 3eyt_A 79 TPISLKAFLHEY-------RIKFPVGVDQPGDGAMPRTMAAYQMRG 117 (158)
T ss_dssp CHHHHHHHHHHT-------TCCSCEEEECCCSSSSCHHHHHTTCCS
T ss_pred CHHHHHHHHHHc-------CCCceEEEcCccchhhHHHHHHcCCCC
Confidence 678889999988 788999999987 7999999853
No 61
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.83 E-value=9.3e-21 Score=148.74 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=86.2
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+++|+.+|+|+++ +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++||+|++|
T Consensus 21 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e 95 (183)
T 2obi_A 21 WRCARSMHEFSAK---DIDGHMVNLDKYRGF-VCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 95 (183)
T ss_dssp GGGCCSGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred CcccCcccceEEE---cCCCCEeeHHHcCCC-EEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCC
Confidence 7899999999998 788999999999998 8999999 9999999999999999999999999999999986
Q ss_pred --ChhhHHHHHHHhhhcCCCCCCcceEEE--cCccHHH
Q 028461 152 --SVFSHLAWVQTDRKSGGLGDLKYPLIA--DITKSIS 185 (208)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f~~l~--D~~~~v~ 185 (208)
+++..++|.+++ +++|+++. |.++...
T Consensus 96 ~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~ 126 (183)
T 2obi_A 96 PGSNEEIKEFAAGY-------NVKFDMFSKICVNGDDA 126 (183)
T ss_dssp CSCHHHHHHHHHTT-------TCCSEEBCCCCCSSTTS
T ss_pred CCCHHHHHHHHHHc-------CCCceEEeeeccCCcch
Confidence 467788888777 78899997 7766543
No 62
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.83 E-value=2.5e-20 Score=145.85 Aligned_cols=101 Identities=22% Similarity=0.281 Sum_probs=93.1
Q ss_pred CCCCCCCCCeEEeeecCC--CCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCe------EEEEEe
Q 028461 78 PLVGNTAPDFAAEAVFDQ--EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT------EILGVS 149 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~--~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv------~vi~Vs 149 (208)
+..|+++|+|++. +. +|+.++|++++|| ++||+|| ++|||+|+.+++.|++++++|+++|+ +||+|+
T Consensus 31 ~~~g~~~p~f~l~---~~~~~g~~~~l~~~~gk-~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~ 105 (183)
T 3lwa_A 31 EADRQQLPDIGGD---SLMEEGTQINLSDFENQ-VVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGIN 105 (183)
T ss_dssp GGGCCCCCCCEEE---BSSSTTCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEE
T ss_pred cccCCCCCceecc---ccccCCcEecHHHhCCC-EEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEE
Confidence 5789999999998 66 8999999999997 9999999 99999999999999999999999999 999999
Q ss_pred CCC--hhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 150 TDS--VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 150 ~d~--~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
+|+ .+..++|.+++ +++|+++.|.++.+.+.||.
T Consensus 106 ~d~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~ 141 (183)
T 3lwa_A 106 VRDYSRDIAQDFVTDN-------GLDYPSIYDPPFMTAASLGG 141 (183)
T ss_dssp CSCCCHHHHHHHHHHT-------TCCSCEEECTTCGGGGGTTT
T ss_pred CCCCCHHHHHHHHHHc-------CCCccEEECCcchHHHHhcc
Confidence 987 78889999988 78899999999999999974
No 63
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.83 E-value=4.3e-20 Score=139.76 Aligned_cols=102 Identities=25% Similarity=0.461 Sum_probs=93.3
Q ss_pred CCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-ChhhHH
Q 028461 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-SVFSHL 157 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d-~~~~~~ 157 (208)
++|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|.++++++++++++|++|++| +.+..+
T Consensus 1 ~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~ 75 (151)
T 2f9s_A 1 SEGSDAPNFVLE---DTNGKRIELSDLKGK-GVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVH 75 (151)
T ss_dssp -CCEECCCCEEE---CTTCCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHH
T ss_pred CCCCcCCcceeE---cCCCCEEEHHHcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHH
Confidence 479999999998 889999999999997 8999999 9999999999999999999999889999999986 467788
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCcc
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLI 192 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~ 192 (208)
+|.+++ +++|+++.|.++++.+.|||..
T Consensus 76 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 76 NFMKSY-------GVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp HHHHHH-------TCCSCEEEETTSHHHHHTTCCS
T ss_pred HHHHHc-------CCCceEEECCchHHHHhcCCCC
Confidence 899888 7789999999999999999853
No 64
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=148.56 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=84.5
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+++|+.+|+|+++ +.+|+.++|++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 23 ~~~g~~~p~f~l~---~~~G~~v~l~~~~Gk-~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~ 97 (185)
T 2gs3_A 23 MRCARSMHEFSAK---DIDGHMVNLDKYRGF-VCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 97 (185)
T ss_dssp GGGCCCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred ccCCCCcCCceeE---cCCCCEeeHHHcCCC-EEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCC
Confidence 6799999999998 789999999999997 9999999 9999999999999999999999999999999986
Q ss_pred --ChhhHHHHHHHhhhcCCCCCCcceEEE--cCccHH
Q 028461 152 --SVFSHLAWVQTDRKSGGLGDLKYPLIA--DITKSI 184 (208)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f~~l~--D~~~~v 184 (208)
+++..++|.+++ +++|+++. |.+++.
T Consensus 98 ~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 98 PGSNEEIKEFAAGY-------NVKFDMFSKICVNGDD 127 (185)
T ss_dssp CSCHHHHHHHHHHT-------TCCSEEBCCCBSSSTT
T ss_pred CCCHHHHHHHHHHc-------CCCCeeeeeeccCChh
Confidence 356778888877 77899997 555543
No 65
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.82 E-value=7.9e-20 Score=139.43 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=88.2
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
...|+.+|+|++. +.+|+.++|++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++|++|++|+.. .
T Consensus 9 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~--~ 81 (152)
T 2lrt_A 9 KIKEASIIDIQLK---DLKGNTRSLTDLKGK-VVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDE--H 81 (152)
T ss_dssp SSCTTCSCCCCEE---BTTSCEECTTTGGGS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCH--H
T ss_pred hccCCCCCCeEEE---cCCCCEEeHHHhCCC-EEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCH--H
Confidence 4689999999998 788999999999997 8999999 8999999999999999999999999999999998753 2
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccH---HHHHhCCcc
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKS---ISKSYGVLI 192 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~---v~~~~gV~~ 192 (208)
.|.+-. .+++|+++.|.++. +.+.||+..
T Consensus 82 ~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 82 FWKTSA------DNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp HHHHHH------TTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred HHHHHH------hCCCceEEECCCCcchHHHHHcCccc
Confidence 233222 14789999999986 999999863
No 66
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.82 E-value=3e-20 Score=141.60 Aligned_cols=102 Identities=12% Similarity=0.214 Sum_probs=92.8
Q ss_pred CCCCCCCCeEEeeecC-CCCceEecccccCCcEEEEEEEcCCCCCCChhh-HHHHHHHHHHHhhCCeEEEEEeC------
Q 028461 79 LVGNTAPDFAAEAVFD-QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLNTEILGVST------ 150 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~-~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~-~~~l~~~~~~~~~~gv~vi~Vs~------ 150 (208)
..|.++|+|++. + .+|+.++|++++|| ++||+|| ++|||+|..+ ++.|++++++|+++|++||+|++
T Consensus 4 ~~g~~~p~~~~~---~~~~g~~~~l~~~~gk-~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~ 78 (160)
T 3lor_A 4 LDNAPLLELDVQ---EWVNHEGLSNEDLRGK-VVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHD 78 (160)
T ss_dssp CTTCCBCCCCEE---EESSSCCCCHHHHTTS-EEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGG
T ss_pred cCCCcCCCcccc---cccCCCccCHHHhCCC-EEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccc
Confidence 479999999998 4 67889999999998 9999999 8999999997 99999999999998999999998
Q ss_pred -CChhhHHHHHHHhhhcCCCCCCcceEEEcCccH------HHHHhCCcc
Q 028461 151 -DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS------ISKSYGVLI 192 (208)
Q Consensus 151 -d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~------v~~~~gV~~ 192 (208)
|+.+..++|.+++ +++|+++.|.++. +++.|||..
T Consensus 79 ~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~v~~ 120 (160)
T 3lor_A 79 VMTPEALKVFIDEF-------GIKFPVAVDMPREGQRIPSTMKKYRLEG 120 (160)
T ss_dssp GSCHHHHHHHHHHT-------TCCSCEEEECCCTTCSSCHHHHHTTCCS
T ss_pred cCCHHHHHHHHHHc-------CCCCcEEECCccccchhhhHHHhcccCc
Confidence 5778889999988 7889999999988 999999853
No 67
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.82 E-value=2.2e-20 Score=143.58 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=83.8
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+++|+.+|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++||+|++|
T Consensus 5 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 79 (169)
T 2v1m_A 5 HKSWNSIYEFTVK---DINGVDVSLEKYRGH-VCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQE 79 (169)
T ss_dssp --CCCSGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred ccCCcccccceee---cCCCCCccHHHcCCC-EEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCC
Confidence 6799999999998 789999999999997 9999999 8999999999999999999999999999999986
Q ss_pred --ChhhHHHH-HHHhhhcCCCCCCcceEEE--cCccHHH
Q 028461 152 --SVFSHLAW-VQTDRKSGGLGDLKYPLIA--DITKSIS 185 (208)
Q Consensus 152 --~~~~~~~~-~~~~~~~~~~~~~~f~~l~--D~~~~v~ 185 (208)
+.+..++| .+++ +++|+++. |.++.+.
T Consensus 80 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~ 111 (169)
T 2v1m_A 80 PWAEAEIKKFVTEKY-------GVQFDMFSKIKVNGSDA 111 (169)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSEEBCCCCCSSTTS
T ss_pred CCCHHHHHHHHHHhc-------CCCCceEEEEeecCccc
Confidence 35677888 5777 78899996 7766544
No 68
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.82 E-value=4.1e-20 Score=145.81 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=95.4
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC-------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST------- 150 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~------- 150 (208)
+.+|+.+|+|++. .+.+|+.++|++++||.++||+|| ++||++|+.+++.|++++++|+++|++|++|++
T Consensus 18 ~~~g~~~p~f~l~--~~~~G~~~~l~~~~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~ 94 (196)
T 2ywi_A 18 FPLGKQAPPFALT--NVIDGNVVRLEDVKSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYP 94 (196)
T ss_dssp CCTTCBCCCCEEE--ETTTCCEEEHHHHCCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCG
T ss_pred CCcCCcCCceeee--ecCCCCEEeHHHhCCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 7899999999986 157889999999999855999999 999999999999999999999998999999999
Q ss_pred -CChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCcc
Q 028461 151 -DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLI 192 (208)
Q Consensus 151 -d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~ 192 (208)
|+.+..++|.+++ +++|+++.|.++++++.|||..
T Consensus 95 ~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~ 130 (196)
T 2ywi_A 95 EDSPENMKKVAEEL-------GYPFPYLYDETQEVAKAYDAAC 130 (196)
T ss_dssp GGSHHHHHHHHHHH-------TCCSCEEECSSCHHHHHHTCCE
T ss_pred ccCHHHHHHHHHHc-------CCCceEEECCchHHHHHhCCCC
Confidence 5678889999988 7889999999999999999853
No 69
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.82 E-value=4.5e-20 Score=141.13 Aligned_cols=100 Identities=21% Similarity=0.359 Sum_probs=92.8
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|.++++++++.++.|++|+.|+ ..+
T Consensus 15 ~~~G~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~~ 87 (158)
T 3hdc_A 15 VRTGALAPNFKLP---TLSGENKSLAQYRGK-IVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--RFP 87 (158)
T ss_dssp CCTTSBCCCCEEE---CTTSCEEESGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--SCC
T ss_pred cCCCCcCCCceeE---cCCCCEEehHHhCCC-EEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--HHH
Confidence 7899999999998 889999999999997 8999999 99999999999999999999998899999999988 566
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
+|.+++ +++|+++.|.++++.+.|||.
T Consensus 88 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v~ 114 (158)
T 3hdc_A 88 EKYRRA-------PVSFNFLSDATGQVQQRYGAN 114 (158)
T ss_dssp GGGGGC-------CCSCEEEECTTSHHHHHTTCC
T ss_pred HHHHHc-------CCCceEEECchHHHHHHhCCC
Confidence 777766 788999999999999999985
No 70
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.82 E-value=2.5e-19 Score=135.49 Aligned_cols=102 Identities=23% Similarity=0.384 Sum_probs=93.0
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC--CChhh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST--DSVFS 155 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~--d~~~~ 155 (208)
..+|+.+|+|++. +.+|+.+++++++|| ++||+|| ++|||.|+.+++.|++++++++++|+.|++|+. |+.+.
T Consensus 2 ~~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~ 76 (153)
T 2l5o_A 2 SLDSKTAPAFSLP---DLHGKTVSNADLQGK-VTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIES 76 (153)
T ss_dssp --CCTTCCSCEEE---CTTSCEEEHHHHTTC-EEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHH
T ss_pred CCCCCCCCCcEee---cCCCCCccHHHhCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHH
Confidence 4689999999998 889999999999997 8999999 999999999999999999999998999999985 66788
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
.++|.+++ +++|+++.|.+.++.+.|||.
T Consensus 77 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 77 VRQYVKDY-------GLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp HHHHHHHT-------TCCSEEEECSSCHHHHHHTCC
T ss_pred HHHHHHHc-------CCCceEEcCchHHHHHHcCCC
Confidence 88999887 788999999999999999985
No 71
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.81 E-value=3.8e-20 Score=142.63 Aligned_cols=103 Identities=22% Similarity=0.338 Sum_probs=92.3
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCC-ChhhHHHHHHHHHHHhhC---CeEEEEEeCC--
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEKL---NTEILGVSTD-- 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~-C~~~~~~l~~~~~~~~~~---gv~vi~Vs~d-- 151 (208)
..+|+++|+|++. +.+| .+++++++|| ++||+|| ++||++ |+.+++.|++++++|+++ +++||+|++|
T Consensus 10 ~~~G~~~p~f~l~---~~~g-~~~l~~~~gk-~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~ 83 (172)
T 2k6v_A 10 RLLNPKPVDFALE---GPQG-PVRLSQFQDK-VVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE 83 (172)
T ss_dssp EEEEEEECCCEEE---CSSS-EEEGGGSTTS-EEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT
T ss_pred cccCCCCCCeEEE---cCCC-CCcHHHhCCC-EEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC
Confidence 4579999999998 8899 9999999998 9999999 999997 999999999999999875 7999999986
Q ss_pred --ChhhHHHHHHHhhhcCCCCCCcceEEEcCc---cHHHHHhCCccC
Q 028461 152 --SVFSHLAWVQTDRKSGGLGDLKYPLIADIT---KSISKSYGVLIP 193 (208)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~---~~v~~~~gV~~~ 193 (208)
+++..++|.+++ +.+|+++.|.+ +++++.||+...
T Consensus 84 ~d~~~~~~~~~~~~-------~~~~~~l~d~~~~~~~~~~~~gv~~~ 123 (172)
T 2k6v_A 84 RDPPEVADRYAKAF-------HPSFLGLSGSPEAVREAAQTFGVFYQ 123 (172)
T ss_dssp TCCHHHHHHHHHHH-------CTTEEEECCCHHHHHHHHHHHTCCEE
T ss_pred CCCHHHHHHHHHHh-------CCCcEEEeCCHHHHHHHHHhcCeEEE
Confidence 457888999988 78999999988 689999998643
No 72
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.81 E-value=7.5e-20 Score=143.53 Aligned_cols=90 Identities=12% Similarity=0.099 Sum_probs=79.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+++|+++|+|++. +.+|+++++++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 23 ~~~g~~~p~f~l~---~~~G~~~~l~~~~Gk-~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e 97 (181)
T 2p31_A 23 MQQEQDFYDFKAV---NIRGKLVSLEKYRGS-VSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQE 97 (181)
T ss_dssp ----CCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred CCcCCccCceEee---cCCCCEecHHHcCCC-EEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCC
Confidence 7899999999998 788999999999998 9999999 9999999999999999999999999999999986
Q ss_pred --ChhhHHHHHHH-hhhcCCCCCCcceEEEc
Q 028461 152 --SVFSHLAWVQT-DRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 152 --~~~~~~~~~~~-~~~~~~~~~~~f~~l~D 179 (208)
+.+..++|.++ + +++|+++.|
T Consensus 98 ~~~~~~~~~~~~~~~-------~~~~p~~~~ 121 (181)
T 2p31_A 98 PDSNKEIESFARRTY-------SVSFPMFSK 121 (181)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSCBBCC
T ss_pred CCCHHHHHHHHHhhc-------CCCceeEee
Confidence 46778889888 7 778999964
No 73
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.81 E-value=1.3e-19 Score=141.20 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=87.1
Q ss_pred CCCCCCC-CeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCC-CChhhHHHHHHHHHHHhh--CCeEEEEEeCC---
Q 028461 79 LVGNTAP-DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTF-VCPTEITAFSDRYTEFEK--LNTEILGVSTD--- 151 (208)
Q Consensus 79 ~vG~~~P-~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp-~C~~~~~~l~~~~~~~~~--~gv~vi~Vs~d--- 151 (208)
.+|+++| +|+++ |.+|++++|++++|| ++||+|| ++||| +|..+++.|+++++++++ ++++||+|++|
T Consensus 2 ~~G~~~P~~f~l~---d~~G~~v~l~~~~Gk-~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLV---DSYGNEFQLKNLKGK-PIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKD 76 (170)
T ss_dssp CTTCBCCTTCEEE---ETTCCEEEGGGGTTS-CEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTC
T ss_pred CCCCcCCCCeEEE---cCCcCEEchHHhCCC-EEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCC
Confidence 6899999 99998 789999999999998 8999999 99998 699999999999999975 56999999987
Q ss_pred ChhhHHHHHHHhhhcCCCCCCcceEEE--c--CccHHHHHhCCc
Q 028461 152 SVFSHLAWVQTDRKSGGLGDLKYPLIA--D--ITKSISKSYGVL 191 (208)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~--D--~~~~v~~~~gV~ 191 (208)
+++.+++|.+++ ++....|+++. | ...++++.||+.
T Consensus 77 ~~~~~~~~~~~~----~~~~~~w~~l~~~~~~~~~~~~~~~g~~ 116 (170)
T 3me7_A 77 TLEDIKRFQKEY----GIDGKGWKVVKAKTSEDLFKLLDAIDFR 116 (170)
T ss_dssp CHHHHHHHHHHT----TCCSSSEEEEEESSHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHc----CCCCCCeEEEeCCCHHHHHHHHHHCCeE
Confidence 467778888887 44334566653 3 337899998864
No 74
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.81 E-value=6.3e-20 Score=145.03 Aligned_cols=95 Identities=11% Similarity=0.142 Sum_probs=84.2
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
++.|+++|+|+++ +.+|+.++|++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++||+|++|
T Consensus 22 ~~~~~~~p~f~l~---~~~G~~~~l~~~~Gk-~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 96 (190)
T 2vup_A 22 MSAASSIFDFEVL---DADHKPYNLVQHKGS-PLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQE 96 (190)
T ss_dssp --CCCSGGGSCCB---BTTSSBCCGGGGTTS-CEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCC
T ss_pred CCCCCcccCeEEE---cCCCCEEEHHHcCCC-EEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCC
Confidence 7899999999998 788999999999998 8999999 8999999999999999999999999999999998
Q ss_pred --ChhhHHHHH-HHhhhcCCCCCCcceEEE--cCccHH
Q 028461 152 --SVFSHLAWV-QTDRKSGGLGDLKYPLIA--DITKSI 184 (208)
Q Consensus 152 --~~~~~~~~~-~~~~~~~~~~~~~f~~l~--D~~~~v 184 (208)
+++..++|. +++ +++|+++. |.++.+
T Consensus 97 ~~~~~~~~~~~~~~~-------~~~~p~l~~~D~~~~~ 127 (190)
T 2vup_A 97 PGNEEEIKEFVCTKF-------KAEFPIMAKINVNGEN 127 (190)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSCBBCCCBSSSTT
T ss_pred CCCHHHHHHHHHHhc-------CCCeEEEeecccCccc
Confidence 567888899 777 77899997 665554
No 75
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.80 E-value=1.4e-19 Score=141.67 Aligned_cols=90 Identities=13% Similarity=0.153 Sum_probs=81.7
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
-..|+.+|+|++. |.+|+.+++++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 12 ~~~~~~~p~f~l~---d~~G~~v~l~~~~Gk-~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~ 86 (180)
T 3kij_A 12 KPKINSFYAFEVK---DAKGRTVSLEKYKGK-VSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESE 86 (180)
T ss_dssp CCCCCCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCC
T ss_pred cCCcCcccceEEe---cCCCCEecHHHcCCC-EEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCC
Confidence 4589999999998 889999999999998 9999999 9999999999999999999999999999999975
Q ss_pred --ChhhHHHHHHH-hhhcCCCCCCcceEEEc
Q 028461 152 --SVFSHLAWVQT-DRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 152 --~~~~~~~~~~~-~~~~~~~~~~~f~~l~D 179 (208)
+++..++|.++ + +++|+++.|
T Consensus 87 ~d~~~~~~~~~~~~~-------~~~~~~~~~ 110 (180)
T 3kij_A 87 PRPSKEVESFARKNY-------GVTFPIFHK 110 (180)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSCBBCC
T ss_pred CCCHHHHHHHHHHhc-------CCCCceeee
Confidence 56788889988 7 778888763
No 76
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.80 E-value=1.4e-19 Score=139.16 Aligned_cols=95 Identities=16% Similarity=0.228 Sum_probs=81.3
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+++|+.+|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 6 ~~~g~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (170)
T 2p5q_A 6 SKNPESVHDFTVK---DAKENDVDLSIFKGK-VLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEE 80 (170)
T ss_dssp ----CCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred CCCCccccceEEE---cCCCCEecHHHhCCC-EEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCC
Confidence 6899999999998 789999999999998 9999999 8999999999999999999999999999999986
Q ss_pred --ChhhHHHHHH-HhhhcCCCCCCcceEE--EcCccHH
Q 028461 152 --SVFSHLAWVQ-TDRKSGGLGDLKYPLI--ADITKSI 184 (208)
Q Consensus 152 --~~~~~~~~~~-~~~~~~~~~~~~f~~l--~D~~~~v 184 (208)
+.+..++|.+ ++ +++|+++ .|.++..
T Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~ 111 (170)
T 2p5q_A 81 PGTNDQITDFVCTRF-------KSEFPIFDKIDVNGEN 111 (170)
T ss_dssp CSCHHHHHHHHHHHT-------CCCSCBBCCCBSSSTT
T ss_pred CCCHHHHHHHHHHhc-------CCCceeEeeeccCCCc
Confidence 4677788888 55 6789998 6777654
No 77
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.80 E-value=2.7e-19 Score=133.40 Aligned_cols=101 Identities=16% Similarity=0.318 Sum_probs=90.3
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC----Ch
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SV 153 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d----~~ 153 (208)
+.+|+++|+|++. +.+|+.+++++ +|| ++||+|| ++||++|+.+++.|.++++++++.+++|++|++| +.
T Consensus 9 ~~~g~~~p~~~l~---~~~g~~~~l~~-~gk-~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~ 82 (145)
T 3erw_A 9 EKQPAVPAVFLMK---TIEGEDISIPN-KGQ-KTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQ 82 (145)
T ss_dssp ---CCSCCEEEEE---CTTSCEEEESC-TTS-EEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCH
T ss_pred ccCCCcCCCceee---cCCCCEEeHHH-CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCH
Confidence 6899999999998 88999999999 887 8999999 9999999999999999999999789999999996 56
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
+..++|.+++ +++|+++.|.++++.+.|||.
T Consensus 83 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~ 113 (145)
T 3erw_A 83 QVVEDFIKAN-------KLTFPIVLDSKGELMKEYHII 113 (145)
T ss_dssp HHHHHHHHHT-------TCCSCEEECSSSHHHHHTTCC
T ss_pred HHHHHHHHHc-------CCceeEEEcCchhHHHhcCcC
Confidence 7778888877 788999999999999999985
No 78
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.80 E-value=5.1e-19 Score=138.29 Aligned_cols=99 Identities=18% Similarity=0.303 Sum_probs=88.0
Q ss_pred CCCCCCCCCCeEEeeecCCCC--ceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC-CCh
Q 028461 77 PPLVGNTAPDFAAEAVFDQEF--INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST-DSV 153 (208)
Q Consensus 77 ~~~vG~~~P~f~l~~~~~~~g--~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~-d~~ 153 (208)
.+.+|+++|+|++. +.+| +.+++++++|| ++||+|| ++|||+|+.+++.|++++++ |++||+|++ |+.
T Consensus 29 ~~~~G~~~P~f~l~---~~~g~~~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~ 99 (176)
T 3kh7_A 29 SALIGKPFPAFDLP---SVQDPARRLTEADLKGK-PALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDN 99 (176)
T ss_dssp TTTTTSBCCCCEEE---BSSCTTSEEEGGGGCSS-CEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCH
T ss_pred ccccCCcCCCcEec---ccCCCCceecHHHhCCC-EEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCH
Confidence 37899999999998 5666 89999999998 8999999 99999999999999998765 799999996 667
Q ss_pred hhHHHHHHHhhhcCCCCCCcce-EEEcCccHHHHHhCCc
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYP-LIADITKSISKSYGVL 191 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~-~l~D~~~~v~~~~gV~ 191 (208)
+..++|.+++ +++|+ ++.|.++++++.|||.
T Consensus 100 ~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 100 AAAIKWLNEL-------HNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp HHHHHHHHHT-------TCCCSEEEEETTCHHHHHHTCC
T ss_pred HHHHHHHHHc-------CCCCceEEECCcchHHHHcCCC
Confidence 8888899887 67788 5899999999999995
No 79
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.79 E-value=9.7e-20 Score=143.70 Aligned_cols=96 Identities=11% Similarity=0.147 Sum_probs=81.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+..+.++|+|++. |.+|++++|++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 20 ~~~~~~~p~f~l~---d~~G~~~~l~~~~Gk-~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e 94 (187)
T 3dwv_A 20 MSAASSIFDFEVL---DADHKPYNLVQHKGS-PLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQE 94 (187)
T ss_dssp CTTCCSGGGSCCB---BTTSCBCCGGGGTTS-CEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCS
T ss_pred hcCCCccCCeEEE---cCCCCEeeHHHhCCC-EEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCC
Confidence 7889999999998 889999999999998 8999999 9999999999999999999999999999999987
Q ss_pred --ChhhHHHHHHHhhhcCCCCCCcceEEE--cCccHH
Q 028461 152 --SVFSHLAWVQTDRKSGGLGDLKYPLIA--DITKSI 184 (208)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f~~l~--D~~~~v 184 (208)
+.+..++|.++. .+++|+++. |.++..
T Consensus 95 ~~~~~~~~~~~~~~------~~~~~p~~~~~d~~~~~ 125 (187)
T 3dwv_A 95 PGNEEEIKEFVCTK------FKAEFPIMAKINVNGEN 125 (187)
T ss_dssp SSBTTHHHHSCCBC------CCCSSCBBCCBCCSCC-
T ss_pred CCCHHHHHHHHHhc------cCCCCceeeccccCCcc
Confidence 345555555521 167899996 555543
No 80
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.78 E-value=1.7e-18 Score=130.69 Aligned_cols=104 Identities=20% Similarity=0.271 Sum_probs=91.6
Q ss_pred CCCCCCCCC-CeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh-h
Q 028461 77 PPLVGNTAP-DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV-F 154 (208)
Q Consensus 77 ~~~vG~~~P-~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~-~ 154 (208)
.+.+|+++| +|++. +.+|+.+++++++|| ++||+|| ++|||.|+.+++.|++++++++++++.|++|++|+. +
T Consensus 2 ~l~~G~~~p~~f~l~---~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~ 76 (152)
T 2lja_A 2 SLRSGNPSAASFSYP---DINGKTVSLADLKGK-YIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKK 76 (152)
T ss_dssp CTTTTCCCSSSCEEE---ETTTEEEESTTTTTS-EEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHH
T ss_pred ccccCCCCCcccEee---cCCCCEeeHHHcCCC-EEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHH
Confidence 378999999 99998 788999999999997 8999999 999999999999999999999988999999999864 5
Q ss_pred hHHHHHHHhhhcCCCCCCc-ceEEEcCccHHHHHhCCcc
Q 028461 155 SHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSYGVLI 192 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~v~~~~gV~~ 192 (208)
..++|.++. +++ ++++.|.++++.+.||+..
T Consensus 77 ~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 77 AWENMVTKD-------QLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp HHHHHHHHH-------TCCSEEEECSSCTHHHHHTTCCS
T ss_pred HHHHHHHhc-------CCCCceeecCcchhHHHHcCcCC
Confidence 677788777 344 5788888899999999853
No 81
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.78 E-value=5.4e-19 Score=143.32 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=79.4
Q ss_pred CCCCCCCCeEEeeecCCC-CceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 79 LVGNTAPDFAAEAVFDQE-FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~~-g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
..+..+|+|+++ |.+ |+.++|++|+|| ++||+|| ++|||+|+ ++|.|++++++|+++|++||+|++|
T Consensus 30 ~~~~~~pdF~l~---d~~~G~~v~Lsd~~GK-vvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e 103 (215)
T 2i3y_A 30 DEKGTIYDYEAI---ALNKNEYVSFKQYVGK-HILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQE 103 (215)
T ss_dssp CCCCCGGGCEEE---BSSSSCEEEGGGGTTS-EEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cccCCcCCcEee---eCCCCCEEcHHHhCCC-EEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCC
Confidence 456789999998 788 999999999998 8999999 99999999 9999999999999999999999975
Q ss_pred --ChhhHHHHHH------HhhhcCCCCCCcceEEEcCc
Q 028461 152 --SVFSHLAWVQ------TDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 152 --~~~~~~~~~~------~~~~~~~~~~~~f~~l~D~~ 181 (208)
+.+.+++|++ ++ +++||++.|.+
T Consensus 104 ~~~~~~i~~f~~~~~~~~~~-------~~~fpll~d~d 134 (215)
T 2i3y_A 104 PGDNKEILPGLKYVRPGGGF-------VPSFQLFEKGD 134 (215)
T ss_dssp CSCHHHHHHHHHHTSSCTTC-------CCSSEEBCCCC
T ss_pred CCCHHHHHHHHHhccchhcc-------CccceeEeeec
Confidence 3467788888 54 78999998653
No 82
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.78 E-value=2.3e-19 Score=137.78 Aligned_cols=100 Identities=12% Similarity=0.163 Sum_probs=92.0
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+++|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|.+++++++ +++|++|++|
T Consensus 11 ~~~g~~~p~~~l~---~~~g~~~~l~~~~gk-~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~ 83 (165)
T 3ha9_A 11 EEVLEREASFSLT---TIDGEVISLNNVGGD-VVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALK 83 (165)
T ss_dssp HHHHHHHHCCCEE---BTTSCEECGGGCCSS-EEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHH
T ss_pred ccccCcCCCCEee---cCCCCEeeHHHhCCC-EEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccc
Confidence 5689999999998 788999999999997 9999999 9999999999999999999998 8999999997
Q ss_pred -------------ChhhHHHHHHHhhhcCCCCCC-cceEEEcCccHHHHHhCCcc
Q 028461 152 -------------SVFSHLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLI 192 (208)
Q Consensus 152 -------------~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~~~~v~~~~gV~~ 192 (208)
+.+..++|.+++ ++ +|+++.| ++++.+.|||..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d-~~~~~~~~~v~~ 130 (165)
T 3ha9_A 84 ALGLNKPGYPPPDTPEMFRKFIANY-------GDPSWIMVMD-DGSLVEKFNVRS 130 (165)
T ss_dssp HHTCCSTTSCCCCCHHHHHHHHHHH-------SCTTSEEEEC-CSHHHHHTTCCS
T ss_pred ccccccccCCCCCCHHHHHHHHHHc-------CCCCeeEEeC-hHHHHHHhCCCC
Confidence 677888899888 67 9999999 999999999853
No 83
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.78 E-value=4.6e-19 Score=142.72 Aligned_cols=97 Identities=14% Similarity=0.086 Sum_probs=79.6
Q ss_pred CCCCCCCCCeEEeeecCCC-CceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-----
Q 028461 78 PLVGNTAPDFAAEAVFDQE-FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----- 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~-g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d----- 151 (208)
-..++.+|+|+++ +.+ |+.++|++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 20 ~~~~~~~p~f~l~---~~~~G~~v~l~~~~Gk-~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~ 94 (208)
T 2f8a_A 20 FQSMQSVYAFSAR---PLAGGEPVSLGSLRGK-VLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ 94 (208)
T ss_dssp --CCCCGGGCEEC---BTTCSSCEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTT
T ss_pred hhhcCccCceEee---eCCCCCCccHHHcCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCccccc
Confidence 3568899999998 777 999999999998 8999999 9999999999999999999999999999999986
Q ss_pred ---ChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 152 ---SVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 152 ---~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
+++.+++|++..++... .+++||++.|.
T Consensus 95 e~d~~~~i~~f~~~~~~~~~-~~~~fp~l~d~ 125 (208)
T 2f8a_A 95 ENAKNEEILNSLKYVRPGGG-FEPNFMLFEKC 125 (208)
T ss_dssp TCSCHHHHHHHHHHTSSCTT-CCCSSEEBCCC
T ss_pred CCCCHHHHHHHHHhcccccc-cccceEEEEEe
Confidence 34677888872111000 17889999754
No 84
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.78 E-value=7.4e-19 Score=134.33 Aligned_cols=99 Identities=16% Similarity=0.262 Sum_probs=86.8
Q ss_pred CCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCC-ChhhHHHHHHHHHHHhh----CCeEEEEEeCCC----h
Q 028461 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEK----LNTEILGVSTDS----V 153 (208)
Q Consensus 83 ~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~-C~~~~~~l~~~~~~~~~----~gv~vi~Vs~d~----~ 153 (208)
.+|+|++. +.+|+++++++++|| ++||+|| ++|||+ |+.+++.|++++++|++ ++++||+|++|+ +
T Consensus 2 ~ap~f~l~---~~~G~~~~l~~~~gk-~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~ 76 (164)
T 2ggt_A 2 LGGPFSLT---THTGERKTDKDYLGQ-WLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTK 76 (164)
T ss_dssp CCCCCEEE---ETTSCEEEGGGGTTC-EEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCH
T ss_pred CCCCeEEE---eCCCCEEeHHHcCCC-EEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCH
Confidence 47999998 789999999999998 9999999 899998 99999999999999987 489999999976 5
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEE---cCccHHHHHhCCccC
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIA---DITKSISKSYGVLIP 193 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~---D~~~~v~~~~gV~~~ 193 (208)
+..++|.+++ +.+|+++. |..+++++.|||...
T Consensus 77 ~~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~~v~~~ 112 (164)
T 2ggt_A 77 EAIANYVKEF-------SPKLVGLTGTREEVDQVARAYRVYYS 112 (164)
T ss_dssp HHHHHHHHTT-------CSSCEEEECCHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHc-------CCCeEEEeCCHHHHHHHHHhcCeEEE
Confidence 6788888877 67899995 555789999999643
No 85
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.78 E-value=1.1e-18 Score=151.07 Aligned_cols=103 Identities=18% Similarity=0.222 Sum_probs=94.6
Q ss_pred CCCCCCCCCCeE-----EeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 77 PPLVGNTAPDFA-----AEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 77 ~~~vG~~~P~f~-----l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
.+.+|+++|+|+ +. +.+|+.+++++++|| ++||+|| ++||++|+.++|.|++++++|+++|++||+|++|
T Consensus 50 ~l~vG~~aPdF~~~~~wL~---d~dG~~vsLsdl~GK-~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLN---TPGNKPIDLKSLRGK-VVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp SCCCCCBCCCCCSCCEEES---SGGGCCCCGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred ccCCCCcCCCccccccccC---CCCCCEEcHHHhCCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 388999999999 76 788999999999998 8999999 8999999999999999999999989999999985
Q ss_pred ------ChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 152 ------SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 152 ------~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
+++..++|++++ +++|+++.|.+.++++.|+|.
T Consensus 125 ~~~~~d~~~~~~~~~~~~-------~l~fpv~~D~~~~l~~~ygV~ 163 (352)
T 2hyx_A 125 EYAFEKVPGNVAKGAANL-------GISYPIALDNNYATWTNYRNR 163 (352)
T ss_dssp SSGGGGCHHHHHHHHHHH-------TCCSCEEECTTSHHHHHTTCC
T ss_pred cccccCCHHHHHHHHHHc-------CCCccEEeCCcHHHHHHcCCC
Confidence 467788888888 788999999999999999984
No 86
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.78 E-value=5.8e-19 Score=140.84 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=86.5
Q ss_pred CCCCCCC--CCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCC-ChhhHHHHHHHHHHHhhC---CeEEEEEeCC
Q 028461 78 PLVGNTA--PDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEKL---NTEILGVSTD 151 (208)
Q Consensus 78 ~~vG~~~--P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~-C~~~~~~l~~~~~~~~~~---gv~vi~Vs~d 151 (208)
..+|+++ |+|++. +.+|+.+++++++|| ++||+|| ++|||+ |+.+++.|+++++++.++ +++||+|++|
T Consensus 13 ~~~g~~~~~p~f~l~---d~~G~~v~l~~~~Gk-~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D 87 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLE---DMYGNEFTEKNLLGK-FSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD 87 (200)
T ss_dssp ---CCCCCCCCCEEE---ETTSCEEEGGGGTTS-CEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC
T ss_pred hccCCCCcCCCEEEE---cCCCCEEeHHHcCCC-EEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC
Confidence 6789886 999998 788999999999997 8999999 999997 999999999999999753 8999999998
Q ss_pred ----ChhhHHHHHHHhhhcCCCCCCcceEEEcC---ccHHHHHhCCc
Q 028461 152 ----SVFSHLAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVL 191 (208)
Q Consensus 152 ----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~---~~~v~~~~gV~ 191 (208)
+++.+++|.+++ +.+|+++.+. .+.+++.|||.
T Consensus 88 ~~~d~~~~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~gv~ 127 (200)
T 2b7k_A 88 PARDSPAVLKEYLSDF-------HPSILGLTGTFDEVKNACKKYRVY 127 (200)
T ss_dssp TTTCCHHHHHHHHTTS-------CTTCEEEECCHHHHHHHHHHTTC-
T ss_pred CCCCCHHHHHHHHHHc-------CCCceEEeCCHHHHHHHHHHcCcE
Confidence 467788888876 6788888743 47899999997
No 87
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=1.3e-20 Score=143.89 Aligned_cols=102 Identities=25% Similarity=0.391 Sum_probs=92.4
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHH-HHHHHh-hCCeEEEEEeCCCh-h
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSD-RYTEFE-KLNTEILGVSTDSV-F 154 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~-~~~~~~-~~gv~vi~Vs~d~~-~ 154 (208)
+++|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|.+ ++++++ +.+++|++|++|+. +
T Consensus 7 l~~g~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~ 81 (159)
T 2ls5_A 7 VRIGEMAPDFTIT---LTDGKQVTLSSLRGK-VVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLE 81 (159)
Confidence 7899999999998 788999999999997 8999999 9999999999999998 999998 77999999999864 5
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
..++|.+++ +++|+++.|.++++.+.||+.
T Consensus 82 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 82 KVLAFAKST-------GVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 677788877 779999999999999999963
No 88
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.78 E-value=1.4e-18 Score=131.60 Aligned_cols=94 Identities=16% Similarity=0.257 Sum_probs=82.0
Q ss_pred CCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhh
Q 028461 85 PDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDR 164 (208)
Q Consensus 85 P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~ 164 (208)
|++++.. ..+|+.++|++++|| ++||+|| ++|||+|+.++|.|.+++++|++++++|++|++|+.+..++|.+++
T Consensus 4 pa~~~~~--~~~G~~~~l~~~~gk-~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~- 78 (151)
T 3raz_A 4 SADELAG--WKDNTPQSLQSLKAP-VRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQT- 78 (151)
T ss_dssp ---CEEE--TTTCCEECGGGCCSS-EEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHS-
T ss_pred Ccchhhc--ccCCCEecHHHhCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHc-
Confidence 4444441 378899999999998 9999999 9999999999999999999998889999999999999999999988
Q ss_pred hcCCCCCCcceEEEcCc---cHHHHHhC
Q 028461 165 KSGGLGDLKYPLIADIT---KSISKSYG 189 (208)
Q Consensus 165 ~~~~~~~~~f~~l~D~~---~~v~~~~g 189 (208)
+++|+++.|.+ .++.+.||
T Consensus 79 ------~~~~~~~~~~~~~~~~~~~~~~ 100 (151)
T 3raz_A 79 ------PVSYPIWRYTGANSRNFMKTYG 100 (151)
T ss_dssp ------CCSSCEEEECCSCHHHHHHTTT
T ss_pred ------CCCCceEecCccchHHHHHHhC
Confidence 78999998874 67889999
No 89
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.1e-19 Score=139.35 Aligned_cols=89 Identities=13% Similarity=0.178 Sum_probs=69.5
Q ss_pred CCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC--------
Q 028461 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-------- 151 (208)
Q Consensus 80 vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d-------- 151 (208)
-|..+|+|+++ |.+|+.++|++++|| ++||+|| ++||++|+ ++|.|++++++|+++|++||+|++|
T Consensus 8 ~~~~~~~f~l~---d~~G~~~~l~~~~Gk-~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d 81 (171)
T 3cmi_A 8 HMSEFYKLAPV---DKKGQPFPFDQLKGK-VVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPG 81 (171)
T ss_dssp --CGGGGCCCB---BTTSCBCCGGGGTTC-EEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC-----
T ss_pred chhheeeeEEE---cCCCCEecHHHcCCC-EEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCC
Confidence 46788999998 889999999999998 9999999 99999999 9999999999999999999999984
Q ss_pred ChhhHHHHH-HHhhhcCCCCCCcceEEEcCc
Q 028461 152 SVFSHLAWV-QTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~f~~l~D~~ 181 (208)
+.+..++|. +++ +++|+++.|.+
T Consensus 82 ~~~~~~~~~~~~~-------~~~~p~~~d~d 105 (171)
T 3cmi_A 82 SDEEIAQFCQLNY-------GVTFPIMKKID 105 (171)
T ss_dssp --------------------CCCSCBBCCCB
T ss_pred CHHHHHHHHHhcc-------CCCceEEeecc
Confidence 456778888 666 77899998754
No 90
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.77 E-value=4e-19 Score=132.90 Aligned_cols=104 Identities=9% Similarity=0.113 Sum_probs=91.7
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC------
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------ 151 (208)
+++|+++|+|++... +.+|+.+++++++|| ++||+|| ++|||.|+.+++.|.+++++++++ ++|++|++|
T Consensus 1 l~~g~~~P~f~~~~~-~~~g~~~~~~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~ 76 (148)
T 2b5x_A 1 MKLRQPMPELTGEKA-WLNGEVTREQLIGEK-PTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDL 76 (148)
T ss_dssp CCTTCBCCCCCCCSE-EESCCCCHHHHTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTS
T ss_pred CCCCCCCCCCccccc-cccCcccchhhcCCC-EEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCcccc
Confidence 468999999998311 577889999999997 8999999 999999999999999999999876 999999987
Q ss_pred ChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCcc
Q 028461 152 SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLI 192 (208)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~~ 192 (208)
+.+..++|.+++ +++|+++.|.++++.+.|||..
T Consensus 77 ~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~ 110 (148)
T 2b5x_A 77 DPGKIKETAAEH-------DITQPIFVDSDHALTDAFENEY 110 (148)
T ss_dssp SHHHHHHHHHHT-------TCCSCEEECSSCHHHHHTCCCC
T ss_pred CHHHHHHHHHHc-------CCCcceEECCchhHHHHhCCCC
Confidence 567788888887 7789999999999999999853
No 91
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.77 E-value=2.9e-18 Score=131.99 Aligned_cols=96 Identities=21% Similarity=0.269 Sum_probs=85.2
Q ss_pred CCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCC-ChhhHHHHHHHHHHHhh----CCeEEEEEeCC----Chhh
Q 028461 85 PDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEK----LNTEILGVSTD----SVFS 155 (208)
Q Consensus 85 P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~-C~~~~~~l~~~~~~~~~----~gv~vi~Vs~d----~~~~ 155 (208)
|+|++. +.+|+.+++++++|| ++||+|| ++||++ |+.+++.|++++++|++ ++++||+|++| +++.
T Consensus 7 p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~ 81 (171)
T 2rli_A 7 GDFHLL---DHRGRARCKADFRGQ-WVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEA 81 (171)
T ss_dssp SCCEEE---ETTSCEEETTTTTTS-EEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHH
T ss_pred CCeEEE---eCCCCEEeHHHhCCC-EEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHH
Confidence 899998 788999999999997 9999999 999997 99999999999999975 58999999997 3677
Q ss_pred HHHHHHHhhhcCCCCCCcceEEEcCc---cHHHHHhCCcc
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIADIT---KSISKSYGVLI 192 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~---~~v~~~~gV~~ 192 (208)
.++|.+++ +.+|+++.|.. +++++.|||..
T Consensus 82 ~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~v~~ 114 (171)
T 2rli_A 82 MARYVQDF-------HPRLLGLTGSTKQVAQASHSYRVYY 114 (171)
T ss_dssp HHHHHHTT-------CTTCCEEECCHHHHHHHHHHSCCCC
T ss_pred HHHHHHHc-------CCCeEEEeCCHHHHHHHHHHhCeEE
Confidence 88888877 77899999754 58999999964
No 92
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=140.38 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=77.3
Q ss_pred CCCCCCCeEEeeecCCC-CceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-------
Q 028461 80 VGNTAPDFAAEAVFDQE-FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------- 151 (208)
Q Consensus 80 vG~~~P~f~l~~~~~~~-g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d------- 151 (208)
..+.+|+|+++ |.+ |+.++|++++|| ++||+|| ++|||+| .++|.|++++++|+++|++||+|++|
T Consensus 13 ~~~~~pdF~l~---d~~~G~~v~Ls~~kGK-vvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~ 86 (207)
T 2r37_A 13 ISGTIYEYGAL---TIDGEEYIPFKQYAGK-YVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEP 86 (207)
T ss_dssp --CCGGGCEEE---BTTSSCEEEGGGGTTS-EEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCC
T ss_pred ccCccCCeEee---eCCCCCEEcHHHhCCC-EEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCC
Confidence 45678999998 788 999999999998 8999999 9999999 79999999999999999999999965
Q ss_pred -ChhhHHHHHH------HhhhcCCCCCCcceEEEcCc
Q 028461 152 -SVFSHLAWVQ------TDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 152 -~~~~~~~~~~------~~~~~~~~~~~~f~~l~D~~ 181 (208)
+.+.+++|++ ++ +++||++.|.+
T Consensus 87 ~~~~~i~~f~~~~~~~~~~-------~~~fp~l~d~d 116 (207)
T 2r37_A 87 GENSEILPTLKYVRPGGGF-------VPNFQLFEKGD 116 (207)
T ss_dssp SCHHHHHHHHHHTSSCTTC-------CCSSEEBCCCC
T ss_pred CCHHHHHHHHHhcchhhcc-------CccceeeeEec
Confidence 3467788888 55 78999998653
No 93
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.77 E-value=5.9e-19 Score=133.70 Aligned_cols=98 Identities=21% Similarity=0.283 Sum_probs=89.3
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC---CChh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST---DSVF 154 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~---d~~~ 154 (208)
+++|+++|+|++. +.+|+.+++++++ | ++||+|| ++||++|+.+++.|.++++++ +++|++|++ ++.+
T Consensus 5 l~~g~~~p~f~l~---~~~g~~~~l~~~~-k-~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~ 75 (154)
T 3ia1_A 5 VKPGEPLPDFLLL---DPKGQPVTPATVS-K-PAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTRE 75 (154)
T ss_dssp CCSBEECCCCCEE---CTTSCEECTTTSC-S-SEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHH
T ss_pred CCCCCcCCceEEE---CCCCCEechHHcC-C-eEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHH
Confidence 7899999999998 8899999999998 6 8999999 999999999999999999999 799999999 6667
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEEc---CccHHHHHhCCc
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIAD---ITKSISKSYGVL 191 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D---~~~~v~~~~gV~ 191 (208)
..++|.+++ +++|+++.| .+.++.+.||+.
T Consensus 76 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 76 VVLEYMKTY-------PRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp HHHHHHTTC-------TTEEECBCCSSCCHHHHHTTSSBC
T ss_pred HHHHHHHHc-------CCCcccccccccchHHHHHHhCCC
Confidence 777777776 789999998 779999999985
No 94
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.76 E-value=5e-18 Score=135.08 Aligned_cols=125 Identities=20% Similarity=0.299 Sum_probs=98.0
Q ss_pred CCCCCCCCCC--CeEEeeec----CC------CCceEecccc--cCCcEEEEEEEcCCCCCCChh-hHHHHHHHHHHH-h
Q 028461 76 IPPLVGNTAP--DFAAEAVF----DQ------EFINVKLSDY--IGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEF-E 139 (208)
Q Consensus 76 ~~~~vG~~~P--~f~l~~~~----~~------~g~~v~Lsd~--~gk~~vlL~f~~~t~Cp~C~~-~~~~l~~~~~~~-~ 139 (208)
+...+|+++| |+++.++- +. .-++++++++ +|| .|||+++|++|+|.|.. ++|.+.+.++++ +
T Consensus 24 ~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~K-kVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k 102 (199)
T 4h86_A 24 MSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENK-KVIITGAPAAFSPTCTVSHIPGYINYLDELVK 102 (199)
T ss_dssp BCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCS-EEEEEECSCTTCHHHHHTTHHHHHHHHHHHHH
T ss_pred hHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCC-eEEEEEeCCCcCCcCChhhChHHHHHHHHHHH
Confidence 3377999999 57766652 11 1257888876 576 79999999999999985 799999999876 7
Q ss_pred hCCe-EEEEEeCCChhhHHHHHHHhhhcCCC-CCCcceEEEcCccHHHHHhCCccCCCCc---ccceEEEE
Q 028461 140 KLNT-EILGVSTDSVFSHLAWVQTDRKSGGL-GDLKYPLIADITKSISKSYGVLIPDQVK---KSLLIFTW 205 (208)
Q Consensus 140 ~~gv-~vi~Vs~d~~~~~~~~~~~~~~~~~~-~~~~f~~l~D~~~~v~~~~gV~~~~~g~---~~r~~fvv 205 (208)
++|+ +|++||+||++++++|.+.+ +. +...+++++|++++++++||+..+..+. ..|-.+||
T Consensus 103 ~kGvd~I~ciSVND~FVm~AW~k~~----~~~~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IV 169 (199)
T 4h86_A 103 EKEVDQVIVVTVDNPFANQAWAKSL----GVKDTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVV 169 (199)
T ss_dssp HSCCCEEEEEESSCHHHHHHHHHHT----TCCCCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEE
T ss_pred hcCCcEEEEEEcCCHHHHHHHHHHh----cccccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEE
Confidence 8888 69999999999999999987 33 2457999999999999999997665432 34555554
No 95
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.76 E-value=1.7e-18 Score=130.09 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=85.1
Q ss_pred CCCCCCC-eEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh-CCeEEEEEeCCC-hhhH
Q 028461 80 VGNTAPD-FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDS-VFSH 156 (208)
Q Consensus 80 vG~~~P~-f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~-~gv~vi~Vs~d~-~~~~ 156 (208)
+|+.+|+ |++. +.+|+.+++++++|| ++||+|| ++|||+|+.++|.|+++++++++ .+++|++|++|+ .+..
T Consensus 3 ~~~~~P~~f~l~---~~~g~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~ 77 (144)
T 1i5g_A 3 LKKFFPYSTNVL---KGAAADIALPSLAGK-TVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDF 77 (144)
T ss_dssp TTTSCSSCSEEE---ETTEEEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHH
T ss_pred hhhhCCCceEEE---cCCCCEecHHHcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHH
Confidence 6899999 9998 788999999999997 8999999 89999999999999999999985 689999999984 5666
Q ss_pred HHHHHHhhhcCCCCCCcceEEE-cCccHHHHHhCCc
Q 028461 157 LAWVQTDRKSGGLGDLKYPLIA-DITKSISKSYGVL 191 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~-D~~~~v~~~~gV~ 191 (208)
++|.+++ + -..++++. |.+.++++.|||.
T Consensus 78 ~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 78 KDYYAKM----P--WLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp HHHHTTC----S--SEECCTTCHHHHHHHHHHTTCC
T ss_pred HHHHHhC----C--ccccccCchHHHHHHHHHcCCC
Confidence 6676654 1 13455555 6678999999985
No 96
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.75 E-value=6.8e-18 Score=124.23 Aligned_cols=98 Identities=17% Similarity=0.277 Sum_probs=88.7
Q ss_pred CCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC-hhhHHH
Q 028461 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSHLA 158 (208)
Q Consensus 80 vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~-~~~~~~ 158 (208)
+|.++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.+.+++++++ ++++++|+.|+ .+..++
T Consensus 1 ~~~~~p~~~~~---~~~g~~~~l~~~~~k-~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~ 73 (136)
T 1zzo_A 1 TVPAQLQFSAK---TLDGHDFHGESLLGK-PAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQE 73 (136)
T ss_dssp CCCGGGCCEEE---BTTSCEEEGGGGTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHH
T ss_pred CCCCCCCcccc---cCCCCEeeHHHhCCC-eEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHH
Confidence 47789999998 788999999999997 8999999 9999999999999999999987 89999999875 677888
Q ss_pred HHHHhhhcCCCCCC-cceEEEcCccHHHHHhCCc
Q 028461 159 WVQTDRKSGGLGDL-KYPLIADITKSISKSYGVL 191 (208)
Q Consensus 159 ~~~~~~~~~~~~~~-~f~~l~D~~~~v~~~~gV~ 191 (208)
|.+++ ++ +|+++.|.++++.+.||+.
T Consensus 74 ~~~~~-------~~~~~~~~~d~~~~~~~~~~i~ 100 (136)
T 1zzo_A 74 FVNKY-------PVKTFTQLADTDGSVWANFGVT 100 (136)
T ss_dssp HHHHT-------TCTTSEEEECTTCHHHHHTTCC
T ss_pred HHHHc-------CCCceEEEEcCCcHHHHHcCCC
Confidence 88887 66 8999999999999999985
No 97
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.75 E-value=6.8e-18 Score=124.57 Aligned_cols=96 Identities=19% Similarity=0.273 Sum_probs=88.3
Q ss_pred CCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC-hhhHHHHH
Q 028461 82 NTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSHLAWV 160 (208)
Q Consensus 82 ~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~-~~~~~~~~ 160 (208)
..+|+|++. +.+|+.+++++++|| ++||+|| ++||++|..+++.+++++++++ ++++++|+.|+ .+..++|.
T Consensus 2 ~~~p~~~l~---~~~g~~~~l~~~~~k-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~ 74 (136)
T 1lu4_A 2 DERLQFTAT---TLSGAPFDGASLQGK-PAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFV 74 (136)
T ss_dssp GGGGCCEEE---BTTSCEEEGGGGTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHH
T ss_pred CCCCCeEee---cCCCCeecHHHhCCC-EEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHH
Confidence 357999998 788999999999997 8999999 9999999999999999999997 89999999976 78889999
Q ss_pred HHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 161 QTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 161 ~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
+++ +++|+++.|.++++.+.||+.
T Consensus 75 ~~~-------~~~~~~~~d~~~~~~~~~~i~ 98 (136)
T 1lu4_A 75 SKY-------NLNFTNLNDADGVIWARYNVP 98 (136)
T ss_dssp HHH-------TCCSEEEECTTSHHHHHTTCC
T ss_pred HHc-------CCCceEEECCchhHHHhcCCC
Confidence 988 779999999999999999985
No 98
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.74 E-value=9.8e-18 Score=130.67 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=80.0
Q ss_pred CCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCC-CChhhHHHHHHHHHHHhhC--CeEEEEEeCCC---
Q 028461 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTF-VCPTEITAFSDRYTEFEKL--NTEILGVSTDS--- 152 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp-~C~~~~~~l~~~~~~~~~~--gv~vi~Vs~d~--- 152 (208)
-+|.++|+|+|. |.+|++++|+|++|| ++||+|| .+||| +|+.+++.|.++++++++. ++++|+||+|+
T Consensus 7 P~~~~~PdF~L~---d~~G~~v~l~d~~Gk-~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~D 81 (170)
T 4hde_A 7 PLNWDLETFQFT---NQDGKPFGTKDLKGK-VWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLD 81 (170)
T ss_dssp CCCBCCCCCEEE---CTTSCEEEHHHHTTS-CEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTC
T ss_pred CCCCcCCCcEEE---CCCCCEEeHHHhCCC-EEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccc
Confidence 479999999998 999999999999998 9999999 99998 7999999999999999765 48899999864
Q ss_pred -hhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 153 -VFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 153 -~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
++.+++|.+.+ +....+|.++.+.+
T Consensus 82 tp~~l~~y~~~~----~~~~~~~~~ltg~~ 107 (170)
T 4hde_A 82 KPENLKAFIQKF----TEDTSNWNLLTGYS 107 (170)
T ss_dssp CHHHHHHHHTTT----CSCCTTEEEEBCSC
T ss_pred cHHHHHHHHHHc----CCCCCCceecCccc
Confidence 56777787776 44456788888765
No 99
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.73 E-value=1.6e-17 Score=121.93 Aligned_cols=96 Identities=24% Similarity=0.363 Sum_probs=82.3
Q ss_pred CCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEe------CCChhhH
Q 028461 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS------TDSVFSH 156 (208)
Q Consensus 83 ~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs------~d~~~~~ 156 (208)
++|+|++. +.+|+.+++++++|| ++||+|| ++|||.|+.+++.+.++++++ +.++.+++|. .++.+..
T Consensus 1 ~~p~f~l~---~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~~~~~~~~~~ 74 (138)
T 4evm_A 1 EVADFELM---GVDGKTYRLSDYKGK-KVYLKFW-ASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGHKGEQSEADF 74 (138)
T ss_dssp CCCCCEEE---BTTSCEEEGGGGTTS-EEEEEEC-CTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTSTTCCCHHHH
T ss_pred CCCcceeE---CCCCCEEEHHHhCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCCCchhhHHHH
Confidence 47999998 789999999999998 8999999 999999999999999999985 4579999993 3445566
Q ss_pred HHHHHHhhhcCCCCCC-cceEEEcCccHHHHHhCCc
Q 028461 157 LAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVL 191 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~f~~l~D~~~~v~~~~gV~ 191 (208)
++|.+++ ++ +|+++.|.++++.+.||+.
T Consensus 75 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~ 103 (138)
T 4evm_A 75 KNWYKGL-------DYKNLPVLVDPSGKLLETYGVR 103 (138)
T ss_dssp HHHHTTC-------CCTTCCEEECTTCHHHHHTTCC
T ss_pred HHHHhhc-------CCCCeeEEECcchHHHHHcCcc
Confidence 6666655 55 8999999999999999985
No 100
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.73 E-value=2.9e-17 Score=126.34 Aligned_cols=101 Identities=18% Similarity=0.285 Sum_probs=86.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccc-cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-Chhh
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-SVFS 155 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~-~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d-~~~~ 155 (208)
+.+|+++|+|++.+. +.+|+.++++++ +|| ++||+|| ++|||+|+.++|.|++++++ |++|++|++| +.+.
T Consensus 22 ~~~G~~~P~f~l~~~-~~~g~~~~~~~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~ 94 (168)
T 2b1k_A 22 ALIGKPVPKFRLESL-DNPGQFYQADVLTQGK-PVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQK 94 (168)
T ss_dssp TTTTSBCCCCEEEES-SSTTCEEEGGGGCCSS-CEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHH
T ss_pred cccCCcCCCeEeecc-cCCCcEeehhHhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHH
Confidence 789999999999832 127889999885 776 8999999 99999999999999888764 8999999975 5677
Q ss_pred HHHHHHHhhhcCCCCCCcce-EEEcCccHHHHHhCCcc
Q 028461 156 HLAWVQTDRKSGGLGDLKYP-LIADITKSISKSYGVLI 192 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~-~l~D~~~~v~~~~gV~~ 192 (208)
.++|.+++ +++|+ ++.|.++++++.|||..
T Consensus 95 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 95 AISWLKEL-------GNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp HHHHHHHH-------CCCCSEEEEETTCHHHHHHTCCS
T ss_pred HHHHHHHc-------CCCCceeeECcchHHHHHcCccc
Confidence 88898888 67888 67899999999999863
No 101
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.71 E-value=5.7e-18 Score=127.57 Aligned_cols=101 Identities=16% Similarity=0.191 Sum_probs=83.8
Q ss_pred CCCCCCCC-eEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh-CCeEEEEEeCCC-hhh
Q 028461 79 LVGNTAPD-FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDS-VFS 155 (208)
Q Consensus 79 ~vG~~~P~-f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~-~gv~vi~Vs~d~-~~~ 155 (208)
.+|+.+|+ |++. +.+| .+++++++|| ++||+|| ++||++|+.++|.|+++++++++ ++++|++|++|+ .+.
T Consensus 3 ~~~~~~P~~f~l~---~~~g-~~~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~ 76 (146)
T 1o8x_A 3 GLDKYLPGIEKLR---RGDG-EVEVKSLAGK-LVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDG 76 (146)
T ss_dssp CGGGTSTTCCEEE---ETTE-EEEGGGGTTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHH
T ss_pred chHhhCCCceEEE---cCCC-CCcHHHhCCC-EEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHH
Confidence 46899999 9998 7889 9999999998 8999999 89999999999999999999984 789999999985 455
Q ss_pred HHHHHHHhhhcCCCCCCcceEEE-cCccHHHHHhCCc
Q 028461 156 HLAWVQTDRKSGGLGDLKYPLIA-DITKSISKSYGVL 191 (208)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~-D~~~~v~~~~gV~ 191 (208)
.++|.+++ + ..++++.. |.++++++.|||.
T Consensus 77 ~~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 77 FAGYFAKM----P--WLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp HHHHHTTC----S--SEECCGGGHHHHHHHHHHTTCC
T ss_pred HHHHHHHC----C--ceeeccchhhHHHHHHHHhCCC
Confidence 66666554 1 23455554 6678899999985
No 102
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.69 E-value=5.7e-17 Score=122.62 Aligned_cols=100 Identities=15% Similarity=0.225 Sum_probs=84.8
Q ss_pred CCCCCCCCCeEEeeecCCCC--------ceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEe
Q 028461 78 PLVGNTAPDFAAEAVFDQEF--------INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS 149 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g--------~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs 149 (208)
+.+|+++|+|++. +.+| +.+++++++|| ++||+|| ++|||+|..+++.|++++++ .++++++|+
T Consensus 8 ~~~g~~~p~f~l~---~~~g~~~~~~~~~~~~l~~~~gk-~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~ 79 (156)
T 1kng_A 8 ALIGRPAPQTALP---PLEGLQADNVQVPGLDPAAFKGK-VSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQLVGIN 79 (156)
T ss_dssp ----CBCCCCCBC---CCTTCEETTEECCCBCGGGGTTS-CEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSEEEEEE
T ss_pred HHhCCCCCCceee---eccCcccccccCceechHHhCCC-EEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeEEEEEE
Confidence 7899999999998 6676 89999999997 8999999 89999999999999988765 469999999
Q ss_pred CC-ChhhHHHHHHHhhhcCCCCCCcce-EEEcCccHHHHHhCCcc
Q 028461 150 TD-SVFSHLAWVQTDRKSGGLGDLKYP-LIADITKSISKSYGVLI 192 (208)
Q Consensus 150 ~d-~~~~~~~~~~~~~~~~~~~~~~f~-~l~D~~~~v~~~~gV~~ 192 (208)
+| +.+..++|.+++ +++|+ ++.|.+.++++.||+..
T Consensus 80 ~~~~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~~ 117 (156)
T 1kng_A 80 YKDAADNARRFLGRY-------GNPFGRVGVDANGRASIEWGVYG 117 (156)
T ss_dssp ESCCHHHHHHHHHHH-------CCCCSEEEEETTSHHHHHTTCCS
T ss_pred CCCCHHHHHHHHHHc-------CCCCceeeeCchhHHHHhcCcCc
Confidence 75 567788898888 77899 88999999999999853
No 103
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.69 E-value=2.1e-17 Score=123.67 Aligned_cols=102 Identities=19% Similarity=0.237 Sum_probs=82.7
Q ss_pred CCCCCCCCCe-EEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHh-hCCeEEEEEeCCC-hh
Q 028461 78 PLVGNTAPDF-AAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE-KLNTEILGVSTDS-VF 154 (208)
Q Consensus 78 ~~vG~~~P~f-~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~-~~gv~vi~Vs~d~-~~ 154 (208)
..+|+.+|+| ++. +.+| .+++++++|| ++||+|| ++||++|+.++|.|++++++++ +.+++|++|++|+ .+
T Consensus 2 ~~~g~~~p~~~~l~---~~~g-~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~ 75 (144)
T 1o73_A 2 SGLAKYLPGATNLL---SKSG-EVSLGSLVGK-TVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENES 75 (144)
T ss_dssp CGGGGTSCTTCCBB---CTTS-CBCSGGGTTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHH
T ss_pred cchhhhCccceEee---cCCC-cCcHHHhCCC-EEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHH
Confidence 3579999997 987 8899 9999999998 8999999 9999999999999999999998 4689999999986 34
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEE-cCccHHHHHhCCc
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIA-DITKSISKSYGVL 191 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~-D~~~~v~~~~gV~ 191 (208)
..++|.+++ + ...+++.. |.+.++.+.|||.
T Consensus 76 ~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 76 DFHDYYGKM----P--WLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp HHHHHHTTC----S--SEECCTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHhC----C--ceEeeccchhHHHHHHHHcCCC
Confidence 455555543 1 12344443 5568899999985
No 104
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.68 E-value=7.3e-18 Score=130.43 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=83.5
Q ss_pred CCCCCCCCCe-EEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh-CCeEEEEEeCCCh-h
Q 028461 78 PLVGNTAPDF-AAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSV-F 154 (208)
Q Consensus 78 ~~vG~~~P~f-~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~-~gv~vi~Vs~d~~-~ 154 (208)
..+|+++|+| ++. +.+| .++|++++|| ++||+|| ++|||+|+.++|.|++++++|++ ++++||+|++|+. +
T Consensus 22 ~~vG~~~P~f~~l~---~~~g-~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~ 95 (165)
T 3s9f_A 22 SGVAKHLGEALKLR---KQAD-TADMDSLSGK-TVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEED 95 (165)
T ss_dssp CHHHHHHHHTSCEE---ETTE-EECSGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHH
T ss_pred hhhcccCCcceeee---cCCC-cccHHHcCCC-EEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHH
Confidence 5799999999 887 7888 9999999997 8999999 99999999999999999999986 7899999999864 4
Q ss_pred hHHHHHHHhhhcCCCCCCcceEEEcCc-cHHHHHhCCc
Q 028461 155 SHLAWVQTDRKSGGLGDLKYPLIADIT-KSISKSYGVL 191 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~-~~v~~~~gV~ 191 (208)
..++|.++. + -..+++..+.. +++++.|||.
T Consensus 96 ~~~~~~~~~----~--~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 96 DFNAYYAKM----P--WLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp HHHHHHTTC----S--SEECCTTCHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----C--CcccccCchhHHHHHHHHcCCC
Confidence 555555543 1 13444444433 7899999985
No 105
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.66 E-value=3.3e-17 Score=125.05 Aligned_cols=99 Identities=11% Similarity=0.166 Sum_probs=82.3
Q ss_pred CCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC------
Q 028461 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS------ 152 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~------ 152 (208)
.+|+.+| ++. +.+|+.+++++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|+
T Consensus 15 ~~~~~~p--~l~---~~~g~~~~~~~~~gk-~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~ 87 (164)
T 2h30_A 15 TVPHTMS--TMK---TADNRPASVYLKKDK-PTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKK 87 (164)
T ss_dssp CHHHHHT--TCE---ETTSSBGGGGCCTTS-CEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCC
T ss_pred ccCCcCC--ccC---CCCCCEeeHHHhCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccC
Confidence 4556566 555 778899999999997 8999999 99999999999999999999998999999999853
Q ss_pred hhhHHHHHHHhhhcCCCCCCc-ceEEEcCccHHHHHhCCc
Q 028461 153 VFSHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSYGVL 191 (208)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~v~~~~gV~ 191 (208)
.+..++|.+.+ +++ |++..|.++++++.|||.
T Consensus 88 ~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~ 120 (164)
T 2h30_A 88 DGEFQKWYAGL-------NYPKLPVVTDNGGTIAQNLNIS 120 (164)
T ss_dssp TTHHHHHHTTS-------CCTTSCEEECTTCHHHHHTTCC
T ss_pred HHHHHHHHHhC-------CCCcceEEEcCchHHHHHcCCC
Confidence 34445555443 455 899999999999999985
No 106
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.45 E-value=1.2e-17 Score=124.53 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=82.3
Q ss_pred CCCCCeEEeeecCCCCceEeccc-ccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHh--hCCeEEEEEeCCC-hhhHH
Q 028461 82 NTAPDFAAEAVFDQEFINVKLSD-YIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE--KLNTEILGVSTDS-VFSHL 157 (208)
Q Consensus 82 ~~~P~f~l~~~~~~~g~~v~Lsd-~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~--~~gv~vi~Vs~d~-~~~~~ 157 (208)
+.+|+|++. +.+|+.+++++ ++||+++||+|| ++|||+|+.++|.|.+++++++ +.+++|++|++|+ .+..+
T Consensus 2 ~~~p~~~l~---~~~g~~~~l~~~~~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~ 77 (143)
T 2lus_A 2 EFIQGIKLV---KKNRCEVNANEALKDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMF 77 (143)
Confidence 457999998 78899999999 898758999999 8999999999999999999995 3589999999984 46677
Q ss_pred HHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
+|.+++ ++.-..+++..|.++++++.|||.
T Consensus 78 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~ 107 (143)
T 2lus_A 78 QYMMES----HGDWLAIPYRSGPASNVTAKYGIT 107 (143)
Confidence 777776 221122445567678899999984
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.18 E-value=7.2e-12 Score=93.08 Aligned_cols=98 Identities=17% Similarity=0.128 Sum_probs=72.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCCCh-
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSV- 153 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d~~- 153 (208)
+..|..+|+|+.. .+.++....+++.+|| ++||+|| ++||++|+...+.+ .++.++++ ++.++.|++++.
T Consensus 4 ~~~~~~~~~f~~~--~~~~~~~~~l~~~~~k-~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~ 77 (134)
T 2fwh_A 4 TAQTQTHLNFTQI--KTVDELNQALVEAKGK-PVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAND 77 (134)
T ss_dssp ------CCCCEEC--CSHHHHHHHHHHHTTS-CEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCC
T ss_pred ccccccCCCcEEe--cCHHHHHHHHHHhcCC-cEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCc
Confidence 3568888999732 2556666778888887 8999999 99999999999888 88888876 599999998653
Q ss_pred hhHHHHHHHhhhcCCCCCCcceEEEcCccHHH
Q 028461 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~ 185 (208)
+......+.+ ++..++..++.|.+|++.
T Consensus 78 ~~~~~l~~~~----~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 78 AQDVALLKHL----NVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp HHHHHHHHHT----TCCSSSEEEEECTTSCBC
T ss_pred chHHHHHHHc----CCCCCCEEEEECCCCCEe
Confidence 4455566666 666788889999888764
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.07 E-value=2e-10 Score=85.39 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=68.8
Q ss_pred CCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCc
Q 028461 94 DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173 (208)
Q Consensus 94 ~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~ 173 (208)
+.+|....|+++.|+ ++||+|| ++||++|+...|.+.++++++++ ++.++.|.+|.. ....+++ ++..+|
T Consensus 38 ~~~~~~~~l~~~~~k-~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~---~~~~~~~----~v~~~P 107 (141)
T 3hxs_A 38 DYENHSKEWKYLGDK-PAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKE---PELARDF----GIQSIP 107 (141)
T ss_dssp CCSSCCCCCCCCCSS-CEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTC---HHHHHHT----TCCSSS
T ss_pred ccccchhHHHHhCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCC---HHHHHHc----CCCCcC
Confidence 677888999998887 8999999 99999999999999999999986 589999988763 2344555 666778
Q ss_pred ceEEEcCccHHHHHhC
Q 028461 174 YPLIADITKSISKSYG 189 (208)
Q Consensus 174 f~~l~D~~~~v~~~~g 189 (208)
..++.|.++++.+..|
T Consensus 108 t~~~~~~~g~~~~~~G 123 (141)
T 3hxs_A 108 TIWFVPMKGEPQVNMG 123 (141)
T ss_dssp EEEEECSSSCCEEEES
T ss_pred EEEEEeCCCCEEEEeC
Confidence 7888887776544333
No 109
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.03 E-value=3e-10 Score=82.86 Aligned_cols=89 Identities=11% Similarity=0.007 Sum_probs=63.7
Q ss_pred CCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEe--CCChhhHHHHH
Q 028461 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS--TDSVFSHLAWV 160 (208)
Q Consensus 83 ~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs--~d~~~~~~~~~ 160 (208)
.+++++.. +.+|+........|+ ++||+|| ++||++|+...|.+.+++++++ .++.++.|+ +|. .....
T Consensus 5 ~~~~l~~~---~~~~~~~~~~~~~~k-~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d~---~~~~~ 75 (126)
T 2l57_A 5 GIKQINFQ---SINVVENLEEAKEGI-PTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEEK---NIDLA 75 (126)
T ss_dssp CSSCTTTT---CCSEESSTTTCCSSS-CEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSSH---HHHHH
T ss_pred ccCCCCcc---ccchhHHHHHHhCCC-cEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCCc---hHHHH
Confidence 34555544 444444444555676 8999999 9999999999999999999987 579999999 553 23344
Q ss_pred HHhhhcCCCCCCcceEEEcCccHH
Q 028461 161 QTDRKSGGLGDLKYPLIADITKSI 184 (208)
Q Consensus 161 ~~~~~~~~~~~~~f~~l~D~~~~v 184 (208)
+++ ++..++..++.|.+|++
T Consensus 76 ~~~----~v~~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 76 YKY----DANIVPTTVFLDKEGNK 95 (126)
T ss_dssp HHT----TCCSSSEEEEECTTCCE
T ss_pred HHc----CCcceeEEEEECCCCCE
Confidence 444 56677777888866543
No 110
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.02 E-value=1.7e-10 Score=87.84 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=71.1
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCCCh-
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSV- 153 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d~~- 153 (208)
..++...+++ . + .++.+++++.+|| ++||+||.++||++|+.+.|.+ .++.+.+. .++.++.|+.+..
T Consensus 24 ~~~~~~~~~~--~---~-~~~~~~~a~~~gk-~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~ 95 (154)
T 2ju5_A 24 RPIAAANLQW--E---S-YAEALEHSKQDHK-PIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKN 95 (154)
T ss_dssp CSSCCCCCCE--E---C-HHHHHHHHHHHCC-CEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSC
T ss_pred hhcccCCCCC--C---C-HHHHHHHHHhCCC-eEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcccc
Confidence 4566666666 3 2 3567888888897 8999999779999999999999 66655443 4688999988753
Q ss_pred -------hhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 154 -------FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 154 -------~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
+......+.+ ++.++|..++.|.+|++...+|.
T Consensus 96 ~~~~~~~~~~~~l~~~~----~v~~~Pt~~~~d~~G~~~~~~G~ 135 (154)
T 2ju5_A 96 HQPEEQRQKNQELKAQY----KVTGFPELVFIDAEGKQLARMGF 135 (154)
T ss_dssp CCCHHHHHHHHHHHHHT----TCCSSSEEEEECTTCCEEEEECC
T ss_pred CCChhhHhhHHHHHHHc----CCCCCCEEEEEcCCCCEEEEecC
Confidence 2333444444 66677777888887765444343
No 111
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.94 E-value=7.1e-10 Score=81.34 Aligned_cols=88 Identities=11% Similarity=0.156 Sum_probs=60.2
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~ 157 (208)
+....++|+++. .+++.++.....|| ++||.|| ++||++|+...|.+.++++++++ ++.++.|++|.. .
T Consensus 18 ~~~~~~~~~~~~-----~~~~~~~~~~~~~k-~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~---~ 86 (128)
T 3ul3_B 18 LRMFKKVPRLQQ-----NGSNIINGVNMKNT-VIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKN---E 86 (128)
T ss_dssp --------CCCC-----CCCSSSSBTTSCCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGC---H
T ss_pred HHHhccCCcccc-----CCccHHHHHHccCC-EEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC---H
Confidence 344566777773 34446677777787 8999999 99999999999999999999985 689999988753 3
Q ss_pred HHHHHhhhcCCCCCCcceEEEcC
Q 028461 158 AWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
...+++ ++.+++..++.+.
T Consensus 87 ~l~~~~----~v~~~Pt~~~~~~ 105 (128)
T 3ul3_B 87 SLARKF----SVKSLPTIILLKN 105 (128)
T ss_dssp HHHHHT----TCCSSSEEEEEET
T ss_pred HHHHHc----CCCCcCEEEEEEC
Confidence 444554 5556665566543
No 112
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.86 E-value=2e-10 Score=89.28 Aligned_cols=81 Identities=12% Similarity=0.023 Sum_probs=56.4
Q ss_pred ecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 101 KLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 101 ~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
.+++++|+ ++||+|| ++|||+|+.++|.|.+++++++ ++.|+.|++|.. ....+++.. .+...+|-.++.|.
T Consensus 48 ~l~~~~~k-~vvv~F~-A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~---~~~~~~~~~-~~v~~iPt~i~~~~ 119 (167)
T 1z6n_A 48 RLQRIERR-YRLLVAG-EMWCPDCQINLAALDFAQRLQP--NIELAIISKGRA---EDDLRQRLA-LERIAIPLVLVLDE 119 (167)
T ss_dssp HHHTCCSC-EEEEEEC-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHH---HHHTTTTTT-CSSCCSSEEEEECT
T ss_pred HHHHhCCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCC---HHHHHHHHH-cCCCCcCeEEEECC
Confidence 45677787 8999999 9999999999999999998875 688888887642 222222211 12345666688887
Q ss_pred ccHHHHHhC
Q 028461 181 TKSISKSYG 189 (208)
Q Consensus 181 ~~~v~~~~g 189 (208)
+|.+...+|
T Consensus 120 ~G~~~~~~g 128 (167)
T 1z6n_A 120 EFNLLGRFV 128 (167)
T ss_dssp TCCEEEEEE
T ss_pred CCCEEEEEc
Confidence 655444444
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.84 E-value=3.1e-09 Score=78.07 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=59.7
Q ss_pred ccccCCcEEEEEEEcCCCCCCChhhHHHHH--HHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCC---CCCcceEE
Q 028461 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFS--DRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL---GDLKYPLI 177 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~--~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~---~~~~f~~l 177 (208)
....|| ++||+|| ++||++|+...|.|. ++.+++++ ++.++.|++++.+......+++ ++ ..+|..++
T Consensus 25 ~~~~~k-~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~~~l~~~~----~v~~~~~~Pt~~~ 97 (133)
T 3fk8_A 25 GKRTHK-PTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRNLELSQAY----GDPIQDGIPAVVV 97 (133)
T ss_dssp HHHHTC-CEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSSHHHHHHT----TCGGGGCSSEEEE
T ss_pred HHhcCC-cEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccchHHHHHHh----CCccCCccceEEE
Confidence 334576 8999999 999999999999999 89888865 6999999996544556666666 55 57777888
Q ss_pred EcCccHHH
Q 028461 178 ADITKSIS 185 (208)
Q Consensus 178 ~D~~~~v~ 185 (208)
.|.+|++.
T Consensus 98 ~d~~G~~~ 105 (133)
T 3fk8_A 98 VNSDGKVR 105 (133)
T ss_dssp ECTTSCEE
T ss_pred ECCCCCEE
Confidence 88876543
No 114
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.71 E-value=2.7e-08 Score=70.63 Aligned_cols=69 Identities=10% Similarity=0.055 Sum_probs=50.3
Q ss_pred cccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccH
Q 028461 104 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (208)
Q Consensus 104 d~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (208)
+..|+ ++||.|| ++||++|+...|.+.+++++++ ++.++.|.+++ ......+++ ++..+|. ++.+.+|+
T Consensus 21 ~~~~~-~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~--~~~~~~~~~----~v~~~Pt-~~~~~~G~ 89 (111)
T 2pu9_C 21 AAGDK-PVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ--ENKTLAKEL----GIRVVPT-FKILKENS 89 (111)
T ss_dssp TCTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--TTHHHHHHH----CCSBSSE-EEEESSSS
T ss_pred hcCCC-EEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc--chHHHHHHc----CCCeeeE-EEEEeCCc
Confidence 33465 8999999 8999999999999999999886 58999998874 223444555 5545554 44555554
No 115
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.71 E-value=1.8e-09 Score=83.00 Aligned_cols=80 Identities=13% Similarity=0.055 Sum_probs=53.2
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCCChhhH-------------------
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSH------------------- 156 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d~~~~~------------------- 156 (208)
.+.+++.+|| ++||+|| ++||++|+...+.+ .++.+.+++ ++.++.|++|+....
T Consensus 39 ~~~~a~~~gk-~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~ 115 (172)
T 3f9u_A 39 GMEYARQHNK-PVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVG 115 (172)
T ss_dssp HHHHHHHTTC-CEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHH
T ss_pred HHHHHHHcCC-eEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchhhhhhhhh
Confidence 4556666787 8999999 99999999863333 444444444 799999998754311
Q ss_pred HHH----HHHhhhcCCCCCCcceEEEcCccHHH
Q 028461 157 LAW----VQTDRKSGGLGDLKYPLIADITKSIS 185 (208)
Q Consensus 157 ~~~----~~~~~~~~~~~~~~f~~l~D~~~~v~ 185 (208)
..| .+.+ ++..+|..++.|.+|++.
T Consensus 116 ~~~~~~~~~~~----~v~~~Pt~~lid~~G~~~ 144 (172)
T 3f9u_A 116 DKWSYLQRVKF----GANAQPFYVLIDNEGNPL 144 (172)
T ss_dssp HHHHHHHHHHH----SCCCSSEEEEECTTSCBS
T ss_pred hhhhHHHHHHc----CCCCcceEEEECCCCCEE
Confidence 112 2333 555777778888876543
No 116
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.69 E-value=3.5e-08 Score=72.98 Aligned_cols=72 Identities=18% Similarity=0.221 Sum_probs=55.4
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHH
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~ 185 (208)
++++++||+|| ++||++|+...|.|.++.+++++ ++.++.|.+|.. ....+++ ++..++..++.|.+|++.
T Consensus 36 ~~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 36 EGDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKE---QELAGAF----GIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp CCSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC---HHHHHHT----TCCSSCEEEEECSSSCCE
T ss_pred cCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCC---HHHHHHc----CCCCCCEEEEECCCCcEE
Confidence 34458999999 99999999999999999999875 589999998763 2344444 555677778887776653
Q ss_pred H
Q 028461 186 K 186 (208)
Q Consensus 186 ~ 186 (208)
+
T Consensus 107 ~ 107 (136)
T 2l5l_A 107 M 107 (136)
T ss_dssp E
T ss_pred E
Confidence 3
No 117
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.66 E-value=1.3e-08 Score=76.33 Aligned_cols=88 Identities=10% Similarity=0.027 Sum_probs=61.5
Q ss_pred CCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHH
Q 028461 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLA 158 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~ 158 (208)
..|.++++..+.. .+++.+...-..++ ++||.|| ++||++|+...|.+.++.+++.+ ++.++.|+.|... .
T Consensus 30 ~~~~~~~~~~v~~---l~~~~~~~~~~~~k-~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~---~ 100 (148)
T 3p2a_A 30 RCGHSLFDGEVIN---ATAETLDKLLQDDL-PMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEP---A 100 (148)
T ss_dssp TTCCBTTCCCCEE---CCTTTHHHHTTCSS-CEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH---H
T ss_pred hcCCccccCCcee---cCHHHHHHHHhcCC-cEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCH---H
Confidence 4567777777663 33334433223454 8999999 99999999999999999999875 4899999887532 3
Q ss_pred HHHHhhhcCCCCCCcceEEEc
Q 028461 159 WVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~l~D 179 (208)
..+++ ++.+++..++.+
T Consensus 101 l~~~~----~v~~~Pt~~~~~ 117 (148)
T 3p2a_A 101 LSTRF----RIRSIPTIMLYR 117 (148)
T ss_dssp HHHHT----TCCSSSEEEEEE
T ss_pred HHHHC----CCCccCEEEEEE
Confidence 44444 555666555554
No 118
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.63 E-value=2.4e-08 Score=82.70 Aligned_cols=64 Identities=9% Similarity=0.145 Sum_probs=49.0
Q ss_pred ccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 105 YIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 105 ~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
-+|+ ++||+|| ++||++|+...|.+.++.+++++ ++.++.|++|.. ....+++ ++.++|-.++.
T Consensus 24 ~~~~-~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~---~~~~~~~----~v~~~Pt~~~~ 87 (287)
T 3qou_A 24 SMTT-PVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE---QMIAAQF----GLRAIPTVYLF 87 (287)
T ss_dssp TTTS-CEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC---HHHHHTT----TCCSSSEEEEE
T ss_pred cCCC-eEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC---HHHHHHc----CCCCCCeEEEE
Confidence 3465 8999999 99999999999999999999985 589999998753 2344444 55556544444
No 119
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.60 E-value=1.2e-08 Score=73.46 Aligned_cols=66 Identities=11% Similarity=0.005 Sum_probs=49.6
Q ss_pred ccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
.+..++ ++||+|| ++||++|+...|.+.++.+++++ +.++.|.+|.. ....+++ ++..+|..++..
T Consensus 27 ~~~~~k-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~---~~l~~~~----~v~~~Pt~~~~~ 92 (116)
T 3qfa_C 27 DAAGDK-LVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDC---QDVASEC----EVKSMPTFQFFK 92 (116)
T ss_dssp HHHTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTT---HHHHHHT----TCCSSSEEEEES
T ss_pred HhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC---HHHHHHc----CCccccEEEEEe
Confidence 334565 8999999 99999999999999999988864 89999988753 3344444 555666555553
No 120
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.59 E-value=5.8e-08 Score=70.19 Aligned_cols=61 Identities=11% Similarity=0.146 Sum_probs=46.4
Q ss_pred cccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcc
Q 028461 104 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKY 174 (208)
Q Consensus 104 d~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f 174 (208)
+..|+ ++||+|| ++|||+|+...|.+.++.++++ ++.++.|..++ ......+++ ++..+|.
T Consensus 34 ~~~~~-~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~--~~~~~~~~~----~v~~~Pt 94 (124)
T 1faa_A 34 AAGDK-PVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ--ENKTLAKEL----GIRVVPT 94 (124)
T ss_dssp HTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--TTHHHHHHH----CCSSSSE
T ss_pred hcCCC-EEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc--chHHHHHHc----CCCeeeE
Confidence 34565 8999999 9999999999999999999886 58899998874 223444555 5545554
No 121
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.59 E-value=6e-08 Score=70.90 Aligned_cols=68 Identities=10% Similarity=0.067 Sum_probs=49.6
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh-CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccH
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~-~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (208)
++ ++||+|| ++||++|+...|.|.++++++++ .++.++.|..+..... .+..++..+|..++.|.++.
T Consensus 25 ~~-~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~-------~~~~~v~~~Pt~~~~~~g~~ 93 (133)
T 2dj3_A 25 KK-DVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDIT-------NDQYKVEGFPTIYFAPSGDK 93 (133)
T ss_dssp TS-EEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCC-------CSSCCCSSSSEEEEECTTCT
T ss_pred CC-cEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHH-------HhhcCCCcCCEEEEEeCCCc
Confidence 55 8999999 99999999999999999999975 3578887777543211 11225556676677776554
No 122
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.59 E-value=2.5e-07 Score=67.29 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=52.1
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccH
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (208)
+++||+|| ++||++|+...|.+.++.+++++ .+.++.|++|.. ....+++ ++..+|..++.|.++.
T Consensus 36 ~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 36 GLWLVEFY-APWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKH---QSLGGQY----GVQGFPTIKIFGANKN 101 (130)
T ss_dssp SCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTC---HHHHHHH----TCCSSSEEEEESSCTT
T ss_pred CeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCC---HHHHHHc----CCCccCEEEEEeCCCC
Confidence 48999999 99999999999999999999875 488988988753 3344455 5556777777877665
No 123
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.56 E-value=6.6e-08 Score=68.55 Aligned_cols=64 Identities=17% Similarity=0.261 Sum_probs=46.5
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++ ++||.|| ++||++|+...|.+.++.++++..++.++.|++|... ...+++ ++..+|.-++..
T Consensus 21 ~~-~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~----~v~~~Pt~~~~~ 84 (112)
T 3d6i_A 21 DK-LIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS---EISELF----EISAVPYFIIIH 84 (112)
T ss_dssp TC-CEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH---HHHHHT----TCCSSSEEEEEE
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH---HHHHHc----CCCcccEEEEEE
Confidence 55 8999999 9999999999999999999876668999999987632 334444 554555544443
No 124
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.55 E-value=4.8e-08 Score=69.46 Aligned_cols=66 Identities=14% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccH
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (208)
++ ++||+|| ++||++|+...|.+.++.++++ ++.++.|.+|.. ....+++ ++..+|..++.+....
T Consensus 24 ~k-~vlv~f~-a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~~G~~ 89 (109)
T 3f3q_A 24 DK-LVVVDFY-ATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDEL---GDVAQKN----EVSAMPTLLLFKNGKE 89 (109)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTC---HHHHHHT----TCCSSSEEEEEETTEE
T ss_pred CC-EEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCC---HHHHHHc----CCCccCEEEEEECCEE
Confidence 55 8999999 9999999999999999999886 488998988753 3344444 5556676666663333
No 125
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=6.9e-08 Score=71.37 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=38.4
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
++||+|| ++||++|+...|.+.++++++++.++.++.|.++.
T Consensus 28 ~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~ 69 (137)
T 2dj0_A 28 TWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR 69 (137)
T ss_dssp CEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT
T ss_pred EEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Confidence 8999999 99999999999999999999987679998888765
No 126
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.54 E-value=3.3e-08 Score=74.77 Aligned_cols=63 Identities=19% Similarity=0.162 Sum_probs=47.8
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++ ++||+|| ++||++|+.+.|.|.+++++++++ +.++.|++|.. .+..+++ ++..+|..++..
T Consensus 23 ~k-~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~---~~l~~~~----~v~~~Pt~~~~~ 85 (149)
T 3gix_A 23 EK-VLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQT---AVYTQYF----DISYIPSTVFFF 85 (149)
T ss_dssp SS-EEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTC---CHHHHHT----TCCSSSEEEEEE
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcC---HHHHHHc----CCCccCeEEEEE
Confidence 55 8999999 999999999999999999988753 88999988753 2344454 554555555443
No 127
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.54 E-value=5.5e-08 Score=70.84 Aligned_cols=78 Identities=10% Similarity=0.060 Sum_probs=55.5
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcce
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYP 175 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~ 175 (208)
.+.+++..|| ++||+|| ++||++|+...+.+ .++.+.++ .++.++.|..+.. ......+++ ++..+|..
T Consensus 19 ~~~~~~~~~k-~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~-~~~~~~~~~----~v~~~Pt~ 90 (130)
T 2kuc_A 19 ALKRAEVEDK-LLFVDCF-TTWCGPCKRLSKVVFKDSLVADYFN-RHFVNLKMDMEKG-EGVELRKKY----GVHAYPTL 90 (130)
T ss_dssp HHHHHHHHSS-CEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHHH-HHSEEEEECSSST-THHHHHHHT----TCCSSCEE
T ss_pred HHHHHHhcCC-eEEEEEE-CCCCccHHHHHHHhcCcHHHHHHHh-cCeEEEEEecCCc-chHHHHHHc----CCCCCCEE
Confidence 4666666787 8999999 99999999999998 55555444 3577777777641 234455555 66677877
Q ss_pred EEEcCccHH
Q 028461 176 LIADITKSI 184 (208)
Q Consensus 176 ~l~D~~~~v 184 (208)
++.|.+|++
T Consensus 91 ~~~d~~G~~ 99 (130)
T 2kuc_A 91 LFINSSGEV 99 (130)
T ss_dssp EEECTTSCE
T ss_pred EEECCCCcE
Confidence 888877654
No 128
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.52 E-value=8.9e-08 Score=68.91 Aligned_cols=72 Identities=10% Similarity=0.046 Sum_probs=54.5
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHh
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~ 188 (208)
+++||.|| ++||++|+...|.+.++.+++++ ++.++.|.++... ...+++ ++..+|..++.|.++.+.+..
T Consensus 22 ~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~---~~~~~~----~v~~~Pt~~~~~~~~~~~~~~ 92 (122)
T 3aps_A 22 THWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYP---QTCQKA----GIKAYPSVKLYQYERAKKSIW 92 (122)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCH---HHHHHT----TCCSSSEEEEEEEEGGGTEEE
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCH---HHHHHc----CCCccceEEEEeCCCccceee
Confidence 48999999 99999999999999999999876 6899999887632 334444 555677667777666544433
Q ss_pred C
Q 028461 189 G 189 (208)
Q Consensus 189 g 189 (208)
|
T Consensus 93 g 93 (122)
T 3aps_A 93 E 93 (122)
T ss_dssp E
T ss_pred c
Confidence 4
No 129
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.51 E-value=1.8e-07 Score=66.61 Aligned_cols=63 Identities=11% Similarity=0.071 Sum_probs=47.6
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.++ ++||+|| ++||++|+...|.+.++++++++ ++.++.|++|.... ..+++ ++..+|..++.
T Consensus 16 ~~~-~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~---l~~~~----~v~~~Pt~~~~ 78 (112)
T 2voc_A 16 SEG-VVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQE---TAGKY----GVMSIPTLLVL 78 (112)
T ss_dssp SSS-EEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCS---HHHHT----TCCSBSEEEEE
T ss_pred CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHH---HHHHc----CCCcccEEEEE
Confidence 455 8999999 99999999999999999999876 69999999876322 33333 44455544444
No 130
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.51 E-value=5.2e-08 Score=70.58 Aligned_cols=65 Identities=14% Similarity=0.078 Sum_probs=49.9
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
.++ ++||+|| ++||+.|+...|.+.++.++++++++.++.|++|.. ....+++ ++..+|..++.+
T Consensus 32 ~~k-~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~---~~~~~~~----~v~~~Pt~~~~~ 96 (121)
T 2j23_A 32 GDK-VVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ---SQIAQEV----GIRAMPTFVFFK 96 (121)
T ss_dssp SSS-CEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC---HHHHHHH----TCCSSSEEEEEE
T ss_pred CCC-EEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC---HHHHHHc----CCCcccEEEEEE
Confidence 344 8999999 999999999999999999999877799999998763 2344444 454566555554
No 131
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.50 E-value=6.4e-08 Score=69.06 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=46.9
Q ss_pred cccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 102 Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
|.+..++ ++||.|| ++||++|+...|.+.++.+++. ++.++.|.+|.. ....+++ ++.++|--++.
T Consensus 15 l~~~~~k-~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~~---~~l~~~~----~V~~~PT~~~~ 80 (105)
T 3zzx_A 15 LNEAGNK-LVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDEC---EDIAQDN----QIACMPTFLFM 80 (105)
T ss_dssp HHHTTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTTC---HHHHHHT----TCCBSSEEEEE
T ss_pred HHhcCCC-EEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEecccC---HHHHHHc----CCCeecEEEEE
Confidence 3344455 8999999 9999999999999999988876 578888887652 3344444 55455533333
No 132
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.50 E-value=1.2e-09 Score=84.01 Aligned_cols=83 Identities=11% Similarity=0.034 Sum_probs=56.1
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCC--CCCcceE
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL--GDLKYPL 176 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~--~~~~f~~ 176 (208)
.+++....|| ++||+|| ++||++|+.+.|.|.++.+.++. ++.|+.|++|..... ..+.. +. ..+|..+
T Consensus 38 ~~~~~~~~~k-~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~~--~~~~~----~~~~~~~Pt~~ 108 (164)
T 1sen_A 38 GKKEAAASGL-PLMVIIH-KSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEEP--KDEDF----SPDGGYIPRIL 108 (164)
T ss_dssp HHHHHHHHTC-CEEEEEE-CTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGSC--SCGGG----CTTCSCSSEEE
T ss_pred HHHHHHhcCC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCchH--HHHHh----cccCCcCCeEE
Confidence 5666667787 8999999 99999999999999997655543 577888887654321 11111 22 2467778
Q ss_pred EEcCccHHH-HHhCC
Q 028461 177 IADITKSIS-KSYGV 190 (208)
Q Consensus 177 l~D~~~~v~-~~~gV 190 (208)
+.|.+|++. +..|.
T Consensus 109 ~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 109 FLDPSGKVHPEIINE 123 (164)
T ss_dssp EECTTSCBCTTCCCT
T ss_pred EECCCCCEEEEEeCC
Confidence 888876543 33443
No 133
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.49 E-value=7.1e-08 Score=69.69 Aligned_cols=63 Identities=10% Similarity=0.077 Sum_probs=49.5
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
++ ++||+|| ++||++|+...|.|.++.+++ .++.++.|++|.. ....+++ ++..+|..++.|.
T Consensus 23 ~~-~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~---~~~~~~~----~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 23 PG-LVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKN---GNAADAY----GVSSIPALFFVKK 85 (118)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTC---HHHHHHT----TCCSSSEEEEEEE
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCC---HHHHHhc----CCCCCCEEEEEeC
Confidence 55 8999999 999999999999999999988 5799999998763 2344444 5556676666665
No 134
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.49 E-value=4.2e-08 Score=72.58 Aligned_cols=73 Identities=10% Similarity=0.095 Sum_probs=49.7
Q ss_pred CCCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCc
Q 028461 94 DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173 (208)
Q Consensus 94 ~~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~ 173 (208)
+.++-.-.+++.+|+ ++||+|| ++||++|+...|.+.++.+++ ++.++.|.+|.. ....+++ ++..+|
T Consensus 27 ~~~~~~~~l~~~~~k-~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~---~~l~~~~----~v~~~P 94 (133)
T 3cxg_A 27 NTGSLNQVFSSTQNS-SIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIH---PKLNDQH----NIKALP 94 (133)
T ss_dssp CTTHHHHHHTC-CCS-EEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTC---HHHHHHT----TCCSSS
T ss_pred ChhHHHHHHHhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccch---HHHHHhc----CCCCCC
Confidence 333333345666676 8999999 999999999999998877665 578888887653 2334444 555566
Q ss_pred ceEEE
Q 028461 174 YPLIA 178 (208)
Q Consensus 174 f~~l~ 178 (208)
..++.
T Consensus 95 t~~~~ 99 (133)
T 3cxg_A 95 TFEFY 99 (133)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 135
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.48 E-value=1e-07 Score=66.54 Aligned_cols=64 Identities=9% Similarity=0.090 Sum_probs=49.3
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
.++ ++||+|| ++||+.|+...|.+.++.++++++ +.++.|++|... ...+++ ++.++|..++.+
T Consensus 18 ~~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~~~~~~----~v~~~Pt~~~~~ 81 (106)
T 3die_A 18 ESG-VQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENP---STAAKY----EVMSIPTLIVFK 81 (106)
T ss_dssp CSS-EEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCH---HHHHHT----TCCSBSEEEEEE
T ss_pred cCC-cEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCH---HHHHhC----CCcccCEEEEEe
Confidence 454 8999999 999999999999999999999864 899999987632 334444 555666555555
No 136
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.48 E-value=8.2e-08 Score=66.77 Aligned_cols=66 Identities=11% Similarity=0.145 Sum_probs=49.4
Q ss_pred ccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
.+..++ +++|+|| ++|||.|+...+.+.++.++++ ++.++.|++|.. ....+++ ++..+|..++.+
T Consensus 15 ~~~~~~-~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~~ 80 (104)
T 2vim_A 15 NENKGR-LIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQN---EEAAAKY----SVTAMPTFVFIK 80 (104)
T ss_dssp HTTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTC---HHHHHHT----TCCSSSEEEEEE
T ss_pred HhcCCC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCC---HHHHHHc----CCccccEEEEEe
Confidence 334565 8999999 9999999999999999998886 799999998753 2344444 555566555554
No 137
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.47 E-value=4.5e-08 Score=72.29 Aligned_cols=69 Identities=9% Similarity=0.042 Sum_probs=50.3
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.+..++..|+ ++||+|| ++||++|+...|.+.++.++++ ++.++.|++|.. ....+++ ++..+|.-++.
T Consensus 38 ~~~~~~~~~k-~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 106 (139)
T 3d22_A 38 KLSEASRDGK-IVLANFS-ARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDEL---SDFSASW----EIKATPTFFFL 106 (139)
T ss_dssp HHHHHHHHTC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS---HHHHHHT----TCCEESEEEEE
T ss_pred HHHHHhhcCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCccc---HHHHHHc----CCCcccEEEEE
Confidence 3444555687 8999999 8999999999999999999884 699999998763 3344444 44444433433
No 138
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=3.6e-07 Score=66.20 Aligned_cols=61 Identities=13% Similarity=0.032 Sum_probs=47.6
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.+||.|| ++||++|+...|.+.++++++++.++.++.|.++.. ....+++ ++..+|-.++.
T Consensus 24 ~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~----~v~~~Pt~~~~ 84 (126)
T 1x5e_A 24 DWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ---PGLSGRF----IINALPTIYHC 84 (126)
T ss_dssp EEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC---HHHHHHT----TCCSSSEEEEE
T ss_pred CEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC---HHHHHHc----CCcccCEEEEE
Confidence 4899999 999999999999999999999877899999988753 2344444 55556655554
No 139
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=2.7e-07 Score=67.18 Aligned_cols=65 Identities=11% Similarity=0.105 Sum_probs=49.8
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh---CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEK---LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~---~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
+++||+|| ++||++|+...|.+.++++++++ .++.++.|..+.. ....+++ ++..+|..++.|..
T Consensus 26 ~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~~g 93 (133)
T 1x5d_A 26 DVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN---QVLASRY----GIRGFPTIKIFQKG 93 (133)
T ss_dssp SEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC---CHHHHHH----TCCSSSEEEEEETT
T ss_pred CeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC---HHHHHhC----CCCeeCeEEEEeCC
Confidence 48999999 99999999999999999999873 4688988888753 2344444 55566666666653
No 140
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.85 E-value=1.9e-08 Score=73.41 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=60.4
Q ss_pred CceEecccccCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCc
Q 028461 97 FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173 (208)
Q Consensus 97 g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~ 173 (208)
.+.+++....|| ++||+|| ++||++|+...|.+ .++.+++++ ++.++.|.+|+. ....+.+.+ ++..+|
T Consensus 9 ~~~~~~~~~~~k-~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~~~~~~----~v~~~P 80 (130)
T 2lst_A 9 PEALALAQAHGR-MVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-EGQELARRY----RVPGTP 80 (130)
Confidence 456777777787 8999999 99999999999999 777776654 578888877532 223344444 455677
Q ss_pred ceEEEcC-ccHH---HHHhCC
Q 028461 174 YPLIADI-TKSI---SKSYGV 190 (208)
Q Consensus 174 f~~l~D~-~~~v---~~~~gV 190 (208)
..++.|+ +|++ .+..|.
T Consensus 81 t~~~~d~~~G~~~~~~~~~G~ 101 (130)
T 2lst_A 81 TFVFLVPKAGAWEEVGRLFGS 101 (130)
Confidence 7788875 3554 344454
No 141
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.46 E-value=7.6e-08 Score=67.15 Aligned_cols=68 Identities=12% Similarity=0.063 Sum_probs=49.9
Q ss_pred ccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
.+..++ ++||.|| ++|||+|+...|.+.++.+++++ +.++.|+.|.. ....+++ ++..+|..++.+.+
T Consensus 16 ~~~~~~-~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~---~~~~~~~----~v~~~Pt~~~~~~g 83 (105)
T 3m9j_A 16 DAAGDK-LVVVDFS-ATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDC---QDVASES----EVKSMPTFQFFKKG 83 (105)
T ss_dssp HHTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTC---HHHHHHT----TCCBSSEEEEEETT
T ss_pred HhcCCC-eEEEEEE-CCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhh---HHHHHHc----CCCcCcEEEEEECC
Confidence 334565 8999999 99999999999999999998864 89999988753 2344444 55556655555443
No 142
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.45 E-value=2.4e-07 Score=66.38 Aligned_cols=66 Identities=12% Similarity=0.062 Sum_probs=50.7
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh----CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~----~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
.++ ++||.|| ++||++|+...|.+.++.+++++ .++.++.|..+..... + ++..+|-.++.+.+
T Consensus 24 ~~~-~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~--------~--~v~~~Pt~~~~~~~ 91 (121)
T 2djj_A 24 DTK-DVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVP--------D--EIQGFPTIKLYPAG 91 (121)
T ss_dssp TTS-CEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCS--------S--CCSSSSEEEEECSS
T ss_pred CCC-CEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccccc--------c--ccCcCCeEEEEeCc
Confidence 455 8999999 99999999999999999999986 3688988888753311 1 44466766777776
Q ss_pred cH
Q 028461 182 KS 183 (208)
Q Consensus 182 ~~ 183 (208)
++
T Consensus 92 ~~ 93 (121)
T 2djj_A 92 AK 93 (121)
T ss_dssp CT
T ss_pred CC
Confidence 55
No 143
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.45 E-value=5.1e-08 Score=72.15 Aligned_cols=62 Identities=13% Similarity=0.068 Sum_probs=46.0
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh------hhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV------FSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~------~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++||+|| ++||++|+...|.+.++.++++ +.++.|++++. +......+++ ++..+|--++.+
T Consensus 33 ~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~----~v~~~Pt~~~~~ 100 (135)
T 3emx_A 33 DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKA----GVEGTPTLVFYK 100 (135)
T ss_dssp SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHH----TCCSSSEEEEEE
T ss_pred cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHc----CCceeCeEEEEc
Confidence 7999999 9999999999999999988774 88999988553 2334444444 555666444444
No 144
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.45 E-value=3.4e-07 Score=67.38 Aligned_cols=64 Identities=11% Similarity=0.117 Sum_probs=47.4
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCC--eEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN--TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~g--v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++ ++||+|| ++||++|+...|.|.++++++++++ +.++.|.++.. ....+++ ++..++..++.+
T Consensus 34 ~~-~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~----~v~~~Pt~~~~~ 99 (140)
T 2dj1_A 34 KD-TVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA---SMLASKF----DVSGYPTIKILK 99 (140)
T ss_dssp CS-EEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC---HHHHHHT----TCCSSSEEEEEE
T ss_pred CC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc---HHHHHHC----CCCccCeEEEEE
Confidence 44 8999999 9999999999999999999998764 77777766542 3344444 555566555553
No 145
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.44 E-value=1.7e-07 Score=68.12 Aligned_cols=47 Identities=9% Similarity=0.141 Sum_probs=39.9
Q ss_pred ccccCCcEEEEEEEcCC-------CCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 103 SDYIGKKYVILFFYPLD-------FTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t-------~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
.+..|+ +++|.|| ++ |||+|+...|.+.++.+++++ ++.++.|.+++
T Consensus 20 ~~~~~~-~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~ 73 (123)
T 1wou_A 20 EQHNGK-TIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGE 73 (123)
T ss_dssp HTTTTS-EEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCC
T ss_pred HHhCCC-EEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCC
Confidence 333465 8999999 99 999999999999999888765 79999999864
No 146
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.43 E-value=3.7e-07 Score=68.87 Aligned_cols=63 Identities=8% Similarity=0.174 Sum_probs=49.5
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
+++ ++||+|| ++||++|+...|.+.++.++++ ++.++.|.+|.. ....+++ ++..+|..++.+
T Consensus 31 ~~~-~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~ 93 (153)
T 2wz9_A 31 AKS-LLVVHFW-APWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGV---PEVSEKY----EISSVPTFLFFK 93 (153)
T ss_dssp TTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS---HHHHHHT----TCCSSSEEEEEE
T ss_pred CCC-eEEEEEE-CCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCC---HHHHHHc----CCCCCCEEEEEE
Confidence 365 8999999 9999999999999999998874 699999998763 2344444 565677777776
No 147
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.43 E-value=6.3e-07 Score=63.30 Aligned_cols=61 Identities=8% Similarity=0.142 Sum_probs=46.7
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||+|| ++|||.|+...|.+.++.+++++ ++.++.|++|... ...+++ ++..+|..++.
T Consensus 26 ~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~---~~~~~~----~v~~~Pt~~~~ 86 (115)
T 1thx_A 26 QPVLVYFW-ASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPNP---TTVKKY----KVEGVPALRLV 86 (115)
T ss_dssp SCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTCH---HHHHHT----TCCSSSEEEEE
T ss_pred ceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCCH---HHHHHc----CCCceeEEEEE
Confidence 48999999 99999999999999999999876 4999999987632 334444 55455555554
No 148
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.42 E-value=1.8e-07 Score=68.18 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=46.7
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.++ ++||+|| ++||++|+...|.|.++.++++ ++.++.|++|.. ....+++ ++..+|.-++.
T Consensus 37 ~~k-~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~---~~l~~~~----~v~~~Pt~~~~ 98 (124)
T 1xfl_A 37 SKT-LVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDEL---KSVASDW----AIQAMPTFMFL 98 (124)
T ss_dssp TTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTS---HHHHHHT----TCCSSSEEEEE
T ss_pred cCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccC---HHHHHHc----CCCccCEEEEE
Confidence 566 8999999 9999999999999999999886 689999988753 2344444 44455543333
No 149
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.42 E-value=4e-07 Score=63.46 Aligned_cols=61 Identities=8% Similarity=0.093 Sum_probs=46.4
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
++++|+|| ++||++|+...|.+.++.+++++ ++.++.|++|.. ....+++ ++..+|..++.
T Consensus 18 ~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 78 (105)
T 1nsw_A 18 GPVLVDFW-AAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDEN---PETTSQF----GIMSIPTLILF 78 (105)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTC---HHHHHHT----TCCSSSEEEEE
T ss_pred CcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCC---HHHHHHc----CCccccEEEEE
Confidence 48999999 99999999999999999999876 489999998763 2334444 55455555554
No 150
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.42 E-value=1.5e-07 Score=65.57 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=48.6
Q ss_pred ccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.+..++ ++||.|| ++|||.|+...|.+.++.++++ .++.++.|+.|.. ....+++ ++..+|.-++.
T Consensus 16 ~~~~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 81 (106)
T 1xwb_A 16 TKASGK-LVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDEC---EDIAMEY----NISSMPTFVFL 81 (106)
T ss_dssp HHHTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTC---HHHHHHT----TCCSSSEEEEE
T ss_pred HhcCCC-EEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccch---HHHHHHc----CCCcccEEEEE
Confidence 333565 8999999 8999999999999999999886 4799999998753 2344444 45455544444
No 151
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.42 E-value=5.5e-08 Score=70.06 Aligned_cols=85 Identities=15% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCCCCCCCeEEeeecCCCCceEecccc--cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhH
Q 028461 79 LVGNTAPDFAAEAVFDQEFINVKLSDY--IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (208)
Q Consensus 79 ~vG~~~P~f~l~~~~~~~g~~v~Lsd~--~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~ 156 (208)
..|...+.+.+. +.+.-.-.+.+. .++ ++||+|| ++||++|+...|.|.++.+++++ +.++.|++|..
T Consensus 7 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~--- 76 (122)
T 2vlu_A 7 AAAVAAEVISVH---SLEQWTMQIEEANTAKK-LVVIDFT-ASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL--- 76 (122)
T ss_dssp -----CCCEEEC---SHHHHHHHHHHHHHTTC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC---
T ss_pred ccCCCCcceecc---CHHHHHHHHHHhhccCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC---
Confidence 456666777664 222111122221 455 8999999 99999999999999999998874 89999988762
Q ss_pred HHHHHHhhhcCCCCCCcceEE
Q 028461 157 LAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l 177 (208)
....+++ ++..+|.-++
T Consensus 77 ~~~~~~~----~v~~~Pt~~~ 93 (122)
T 2vlu_A 77 KPIAEQF----SVEAMPTFLF 93 (122)
T ss_dssp HHHHHHT----TCCSSSEEEE
T ss_pred HHHHHHc----CCCcccEEEE
Confidence 2344444 4445554333
No 152
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.41 E-value=1.7e-07 Score=67.32 Aligned_cols=62 Identities=6% Similarity=0.127 Sum_probs=46.6
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.|+ ++||+|| ++||++|+...|.|.++.+++++ +.++.|++|.. ....+++ ++..+|..++.
T Consensus 29 ~~k-~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~ 90 (114)
T 2oe3_A 29 QND-KLVIDFY-ATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES---PDIAKEC----EVTAMPTFVLG 90 (114)
T ss_dssp HCS-EEEEEEE-CTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC---HHHHHHT----TCCSBSEEEEE
T ss_pred CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC---HHHHHHC----CCCcccEEEEE
Confidence 355 8999999 99999999999999999998864 89999988753 2344444 44455544443
No 153
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.41 E-value=8.6e-08 Score=67.42 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=42.8
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++++|+|| ++||++|+...|.+.++.+++. ++.++.|++|... ...+++ ++..+|-.++.+
T Consensus 19 ~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~---~l~~~~----~v~~~Pt~~~~~ 79 (105)
T 4euy_A 19 QLVLLFIK-TENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQ---EIAGRY----AVFTGPTVLLFY 79 (105)
T ss_dssp SEEEEEEE-ESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC----------------CCCCEEEEEE
T ss_pred CCEEEEEe-CCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCH---HHHHhc----CCCCCCEEEEEe
Confidence 48999999 9999999999999999999884 6899999887532 233333 444556555555
No 154
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.41 E-value=8.4e-07 Score=64.48 Aligned_cols=67 Identities=7% Similarity=0.066 Sum_probs=49.8
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh----CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCcc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~----~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (208)
++ ++||.|| ++||++|+...|.+.++.+++.. .++.++.|..+. ..+..+++ ++.++|-.++.+.++
T Consensus 33 ~~-~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~---~~~l~~~~----~v~~~Pt~~~~~~g~ 103 (127)
T 3h79_A 33 EK-DVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK---YPDVIERM----RVSGFPTMRYYTRID 103 (127)
T ss_dssp TC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT---CHHHHHHT----TCCSSSEEEEECSSC
T ss_pred CC-CEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc---cHhHHHhc----CCccCCEEEEEeCCC
Confidence 44 8999999 99999999999999999988752 357888888775 23344554 555666666666544
No 155
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.41 E-value=2.3e-07 Score=65.53 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=45.4
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKY 174 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f 174 (208)
++ ++||.|| ++||++|+...|.|.++.+++++ ++.++.|+.|.. ....+++ ++..+|.
T Consensus 24 ~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~---~~~~~~~----~v~~~Pt 81 (112)
T 1ep7_A 24 HK-PIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAV---AAVAEAA----GITAMPT 81 (112)
T ss_dssp TC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTT---HHHHHHH----TCCBSSE
T ss_pred CC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCch---HHHHHHc----CCCcccE
Confidence 65 8999999 89999999999999999999876 799999988763 3344444 4444554
No 156
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.40 E-value=2.2e-07 Score=65.68 Aligned_cols=62 Identities=15% Similarity=0.166 Sum_probs=46.4
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
++ ++||+|| ++||++|+...|.+.++.+++++ ++.++.|++|.. ....+++ ++..+|.-++.
T Consensus 23 ~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 84 (112)
T 1t00_A 23 DK-PVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN---PGTAAKY----GVMSIPTLNVY 84 (112)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC---HHHHHHT----TCCSSSEEEEE
T ss_pred CC-eEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC---HHHHHhC----CCCcccEEEEE
Confidence 44 8999999 99999999999999999999875 489999998763 2334444 44455543333
No 157
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.39 E-value=2.6e-07 Score=64.69 Aligned_cols=62 Identities=11% Similarity=0.168 Sum_probs=46.6
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
++ ++||+|| ++||++|+...|.+.++.+++++ ++.++.|+.|.. ....+++ ++..+|.-++.
T Consensus 19 ~~-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 80 (107)
T 1dby_A 19 SV-PVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDES---PNVASEY----GIRSIPTIMVF 80 (107)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC---HHHHHHH----TCCSSCEEEEE
T ss_pred CC-cEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCC---HHHHHHC----CCCcCCEEEEE
Confidence 44 8999999 99999999999999999999875 489999988753 2344444 44455544444
No 158
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.39 E-value=5.8e-07 Score=64.65 Aligned_cols=62 Identities=10% Similarity=0.009 Sum_probs=47.6
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
++ ++||+|| ++||+.|+...+.|.++.+++.+ ++.++.|++|.. ..+.+++ ++..++..++.
T Consensus 31 ~k-~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~---~~l~~~~----~v~~~Pt~~~~ 92 (119)
T 1w4v_A 31 ET-PVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDH---TDLAIEY----EVSAVPTVLAM 92 (119)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTT---HHHHHHT----TCCSSSEEEEE
T ss_pred CC-cEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCC---HHHHHHc----CCCcccEEEEE
Confidence 54 8999999 99999999999999999999875 599999998763 2344444 55455554554
No 159
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.39 E-value=2.4e-07 Score=66.47 Aligned_cols=64 Identities=11% Similarity=0.034 Sum_probs=46.0
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChh---hHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF---SHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~---~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
|+ ++||+|| ++|||+|+...|.+.++.+++. ..++.+.++... ....+.+++ ++..+|-.++.+
T Consensus 29 ~~-~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~----~i~~~Pt~~~~~ 95 (118)
T 1zma_A 29 KE-TATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQLNDLQAFRSRY----GIPTVPGFVHIT 95 (118)
T ss_dssp TC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGHHHHHHHHHHH----TCCSSCEEEEEE
T ss_pred CC-eEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcHHHHHHHHHHc----CCCCCCeEEEEE
Confidence 54 8999999 9999999999999999988764 356667666532 334555555 555566555554
No 160
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.38 E-value=1.1e-07 Score=68.03 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=47.5
Q ss_pred cccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 102 Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+.+..++ ++||+|| ++||++|+...|.+.++.+++ ++.++.|++|.. ....+++ ++..+|.-++.
T Consensus 28 l~~~~~~-~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~---~~~~~~~----~v~~~Pt~~~~ 92 (117)
T 2xc2_A 28 LEQHKNK-LVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKL---EETARKY----NISAMPTFIAI 92 (117)
T ss_dssp HHHTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTS---HHHHHHT----TCCSSSEEEEE
T ss_pred HHhCCCC-EEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCcc---HHHHHHc----CCCccceEEEE
Confidence 3444565 8999999 999999999999999988777 789999988753 3344444 55455543443
No 161
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.37 E-value=7.5e-07 Score=62.17 Aligned_cols=63 Identities=10% Similarity=0.108 Sum_probs=48.3
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.++ ++||+|| ++||+.|....|.+.++.+++++ ++.++.|..|.. ....+++ ++.++|..++.
T Consensus 20 ~~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~---~~~~~~~----~i~~~Pt~~~~ 82 (109)
T 3tco_A 20 NNK-LVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDEN---QKIADKY----SVLNIPTTLIF 82 (109)
T ss_dssp HSS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC---HHHHHHT----TCCSSSEEEEE
T ss_pred cCC-eEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccC---HHHHHhc----CcccCCEEEEE
Confidence 355 8999999 99999999999999999999876 588998988753 2344454 55556655555
No 162
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.37 E-value=6.6e-07 Score=62.36 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=46.4
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||.|| ++||+.|+...+.+.++.+++++ ++.++.|+++... ...+++ ++..+|..++.
T Consensus 21 ~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~----~v~~~Pt~~~~ 81 (107)
T 2i4a_A 21 GLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNP---ETPNAY----QVRSIPTLMLV 81 (107)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCC---HHHHHT----TCCSSSEEEEE
T ss_pred CEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCH---HHHHhc----CCCccCEEEEE
Confidence 48999999 99999999999999999999875 6999999887532 233444 44455544444
No 163
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.36 E-value=5.9e-07 Score=62.42 Aligned_cols=61 Identities=11% Similarity=0.153 Sum_probs=46.0
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||+|| ++|||.|+...+.+.++.+++++ ++.++.|+.|.. ....+++ ++..+|.-++.
T Consensus 19 ~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 79 (105)
T 1fb6_A 19 VPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA---PGIATQY----NIRSIPTVLFF 79 (105)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC---HHHHHHT----TCCSSSEEEEE
T ss_pred CcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch---HHHHHhC----CCCcccEEEEE
Confidence 48999999 99999999999999999998876 489999988753 2344444 44455544444
No 164
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.36 E-value=2.8e-07 Score=64.77 Aligned_cols=62 Identities=13% Similarity=0.091 Sum_probs=46.3
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.++ ++||.|| ++||++|+...|.+.++.+++. ++.++.|++|.. ....+++ ++..+|--++.
T Consensus 20 ~~~-~v~v~f~-a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~---~~~~~~~----~v~~~Pt~~~~ 81 (107)
T 1gh2_A 20 GSR-LAVVKFT-MRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQC---QGTAATN----NISATPTFQFF 81 (107)
T ss_dssp TTS-CEEEEEE-CSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS---HHHHHHT----TCCSSSEEEEE
T ss_pred CCC-EEEEEEE-CCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccC---HHHHHhc----CCCcccEEEEE
Confidence 355 8999999 9999999999999999999883 689999998753 2233444 45455544444
No 165
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.36 E-value=3.5e-07 Score=73.25 Aligned_cols=66 Identities=11% Similarity=0.070 Sum_probs=50.6
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCC--eEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN--TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~g--v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
.|+ +++|.|| ++||++|+...|.+.++++++++++ +.++.|..+.. .+..+++ ++..++-.++.+.
T Consensus 31 ~~~-~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~~ 98 (241)
T 3idv_A 31 DKD-TVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA---SVLASRF----DVSGYPTIKILKK 98 (241)
T ss_dssp TCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC---HHHHHHT----TCCSSSEEEEEET
T ss_pred cCC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC---HHHHHhc----CCCcCCEEEEEcC
Confidence 455 8999999 9999999999999999999998766 78888877652 3445555 5556665555543
No 166
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.34 E-value=4.4e-07 Score=64.47 Aligned_cols=62 Identities=11% Similarity=0.207 Sum_probs=46.5
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.|+ ++||+|| ++||+.|+...|.+.++.++++ ++.++.|++|... ...+++ ++..+|.-++.
T Consensus 25 ~~k-~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~---~~~~~~----~v~~~Pt~~~~ 86 (112)
T 1syr_A 25 QNE-LVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVS---EVTEKE----NITSMPTFKVY 86 (112)
T ss_dssp HCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTH---HHHHHT----TCCSSSEEEEE
T ss_pred cCC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCH---HHHHHc----CCCcccEEEEE
Confidence 455 8999999 9999999999999999998876 5999999987632 344444 44455543333
No 167
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.34 E-value=5.2e-07 Score=67.53 Aligned_cols=68 Identities=16% Similarity=0.059 Sum_probs=48.9
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHH
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v 184 (208)
++ ++||+|| ++||++|+...|.+.++++++++ ++.++.|++|.... ..+++ ++..+|-.++.+..+.+
T Consensus 23 ~k-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~---~~~~~----~i~~~Pt~~~~~~G~~v 90 (142)
T 1qgv_A 23 DR-VVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPD---FNKMY----ELYDPCTVMFFFRNKHI 90 (142)
T ss_dssp SS-EEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCT---TTTSS----CSCSSCEEEEEETTEEE
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHH---HHHHc----CCCCCCEEEEEECCcEE
Confidence 55 8999999 99999999999999999999865 58999999875322 12222 45455554455443333
No 168
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.33 E-value=1.2e-06 Score=70.93 Aligned_cols=66 Identities=5% Similarity=-0.015 Sum_probs=51.8
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh--CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~--~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
+++||.|| ++||++|+...|.+.++++++++ .++.++.|+++.. ......+++ ++..+|-.++.+.
T Consensus 31 ~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~----~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 31 SAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDF----NIPGFPTVRFFXA 98 (244)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHT----TCCSSSEEEEECT
T ss_pred CeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHc----CCCccCEEEEEeC
Confidence 48999999 99999999999999999999986 4799999998542 234455555 6656676666765
No 169
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.33 E-value=7.4e-07 Score=62.39 Aligned_cols=61 Identities=10% Similarity=0.171 Sum_probs=45.9
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||+|| ++||++|+...|.+.++.+++++ ++.++.|+++... ...+++ ++..+|..++.
T Consensus 21 ~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~----~v~~~Pt~~~~ 81 (108)
T 2trx_A 21 GAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNP---GTAPKY----GIRGIPTLLLF 81 (108)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCT---THHHHT----TCCSSSEEEEE
T ss_pred CeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCH---HHHHHc----CCcccCEEEEE
Confidence 48999999 99999999999999999999875 5899999887532 233333 44455544554
No 170
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.31 E-value=5e-07 Score=63.52 Aligned_cols=62 Identities=15% Similarity=0.142 Sum_probs=47.5
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
+++||.|| ++||++|+...|.+.++.+++++ ++.++.|.+|... ...+++ ++..+|-.++..
T Consensus 23 ~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~---~l~~~~----~v~~~Pt~~~~~ 84 (111)
T 3gnj_A 23 KACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEK---TLFQRF----SLKGVPQILYFK 84 (111)
T ss_dssp CCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCH---HHHHHT----TCCSSCEEEEEE
T ss_pred CEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcCh---hHHHhc----CCCcCCEEEEEE
Confidence 48999999 99999999999999999999875 5899999987632 344444 554555445554
No 171
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.31 E-value=4.2e-07 Score=64.65 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=46.7
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.++ ++||+|| ++||+.|+...|.+.++.++++ ++.++.|++|.. ....+++ ++..+|.-++.
T Consensus 27 ~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 88 (118)
T 2vm1_A 27 TGK-LVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDEL---KDVAEAY----NVEAMPTFLFI 88 (118)
T ss_dssp HTC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS---HHHHHHT----TCCSBSEEEEE
T ss_pred CCC-EEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccC---HHHHHHc----CCCcCcEEEEE
Confidence 365 8999999 9999999999999999999886 789999988752 3344444 44455544444
No 172
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.30 E-value=6.9e-07 Score=68.51 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=38.9
Q ss_pred CcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 108 k~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
++++||.|| ++||++|+...|.|.++.+++.+ .+.|+-|.+|..
T Consensus 41 ~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~ 84 (160)
T 2av4_A 41 ERLVCIRFG-HDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV 84 (160)
T ss_dssp SSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC
T ss_pred CCEEEEEEE-CCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC
Confidence 358999999 99999999999999999999975 478888999863
No 173
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.29 E-value=4.6e-07 Score=63.94 Aligned_cols=63 Identities=16% Similarity=0.209 Sum_probs=46.7
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
.|+ ++||.|| ++||++|....+.+.++.++++ ++.++.|++|.. ....+++ ++..+|.-++.+
T Consensus 25 ~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~~ 87 (113)
T 1ti3_A 25 SQK-LIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDEL---KAVAEEW----NVEAMPTFIFLK 87 (113)
T ss_dssp SSS-EEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTC---HHHHHHH----HCSSTTEEEEEE
T ss_pred cCC-eEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcccc---HHHHHhC----CCCcccEEEEEe
Confidence 465 8999999 8999999999999999998886 699999988753 2333444 333555444443
No 174
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.29 E-value=1.4e-06 Score=60.10 Aligned_cols=62 Identities=8% Similarity=0.124 Sum_probs=46.3
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.++ ++||.|| ++|||.|+...+.+.++.+++++ +.++.|+.|.. ....+++ ++..+|.-++.
T Consensus 15 ~~~-~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~---~~~~~~~----~v~~~Pt~~~~ 76 (104)
T 2e0q_A 15 SHE-IAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDEN---PDIAARY----GVMSLPTVIFF 76 (104)
T ss_dssp HSS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC---HHHHHHT----TCCSSCEEEEE
T ss_pred cCC-cEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCC---HHHHHhC----CccccCEEEEE
Confidence 355 8999999 99999999999999999988875 89999998763 2334444 44455544444
No 175
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.29 E-value=3.4e-07 Score=64.32 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=47.2
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhC--CeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL--NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~--gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++ ++||.|| ++||++|+...|.+.++.+++.+. ++.++.|..+.. ....+++ ++..+|..++..
T Consensus 21 ~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~ 86 (111)
T 3uvt_A 21 EG-ITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE---RNICSKY----SVRGYPTLLLFR 86 (111)
T ss_dssp SS-EEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC---HHHHHHT----TCCSSSEEEEEE
T ss_pred CC-cEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc---HhHHHhc----CCCcccEEEEEe
Confidence 55 8999999 999999999999999999887643 688888888753 2344444 555556545543
No 176
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.29 E-value=4.7e-07 Score=68.72 Aligned_cols=62 Identities=8% Similarity=0.104 Sum_probs=47.5
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
+++||+|| ++||++|+...|.|.++++++++ ++.++.|++|... ...+++ ++..+|..++.+
T Consensus 65 ~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~---~l~~~~----~i~~~Pt~~~~~ 126 (155)
T 2ppt_A 65 LPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHP---AVAGRH----RIQGIPAFILFH 126 (155)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTST---HHHHHT----TCCSSSEEEEEE
T ss_pred CcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccH---HHHHHc----CCCcCCEEEEEe
Confidence 48999999 99999999999999999999976 4999999987532 233444 555556555553
No 177
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.28 E-value=1.6e-06 Score=60.35 Aligned_cols=62 Identities=10% Similarity=0.115 Sum_probs=47.4
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
++ +++|.|| ++||+.|+...+.+.++.+++++ ++.++.|+.|... ...+++ ++..+|..++.
T Consensus 18 ~~-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~----~v~~~Pt~~~~ 79 (109)
T 2yzu_A 18 HP-LVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENP---KTAMRY----RVMSIPTVILF 79 (109)
T ss_dssp CS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCH---HHHHHT----TCCSSSEEEEE
T ss_pred CC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCH---hHHHhC----CCCcCCEEEEE
Confidence 54 8999999 99999999999999999999875 5899999987632 334444 55556655554
No 178
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.27 E-value=4.1e-07 Score=72.15 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=50.6
Q ss_pred ccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccH
Q 028461 105 YIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (208)
Q Consensus 105 ~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (208)
..++ ++||.|| ++||++|+...|.+.++.+++++ ++.++.|+++.. ....+.+ ++..+|..++. .+|.
T Consensus 112 ~~~~-~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~-~~G~ 179 (210)
T 3apq_A 112 NSGE-LWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD---RMLCRMK----GVNSYPSLFIF-RSGM 179 (210)
T ss_dssp HHSC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC---HHHHHHT----TCCSSSEEEEE-CTTS
T ss_pred ccCC-cEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc---HHHHHHc----CCCcCCeEEEE-ECCC
Confidence 3565 8999999 99999999999999999999875 589999988763 2344444 55566655555 3443
No 179
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.24 E-value=7.6e-07 Score=65.09 Aligned_cols=62 Identities=18% Similarity=0.111 Sum_probs=46.1
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.++ ++||+|| ++||++|+...|.|.++.++++ ++.++.|.+|... ...+++ ++..+|.-++.
T Consensus 36 ~~k-~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~---~l~~~~----~v~~~Pt~~i~ 97 (125)
T 1r26_A 36 EDI-LTVAWFT-AVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNS---EIVSKC----RVLQLPTFIIA 97 (125)
T ss_dssp SSS-CEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCH---HHHHHT----TCCSSSEEEEE
T ss_pred cCC-EEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCH---HHHHHc----CCCcccEEEEE
Confidence 454 8999999 9999999999999999999884 6999999987532 233444 44455543333
No 180
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.24 E-value=8.4e-07 Score=63.41 Aligned_cols=63 Identities=11% Similarity=0.111 Sum_probs=47.6
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++ ++||+|| ++||+.|+...+.+.++.+++++ ++.++.|+++.. ....+++ ++..+|.-++.+
T Consensus 30 ~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~---~~~~~~~----~i~~~Pt~~~~~ 92 (121)
T 2i1u_A 30 NK-PVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN---PETARNF----QVVSIPTLILFK 92 (121)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC---HHHHHHT----TCCSSSEEEEEE
T ss_pred CC-cEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC---HHHHHhc----CCCcCCEEEEEE
Confidence 44 8999999 99999999999999999998875 589999998753 2344444 554555545444
No 181
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.21 E-value=1.3e-06 Score=63.87 Aligned_cols=43 Identities=7% Similarity=0.164 Sum_probs=38.4
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
++ ++||+|| ++||++|+...|.+.++.+++++ ++.++.|++|.
T Consensus 40 ~k-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~ 82 (128)
T 2o8v_B 40 DG-AILVDFW-AEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQ 82 (128)
T ss_dssp SS-EEEEEEE-CSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTT
T ss_pred CC-EEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC
Confidence 44 8999999 99999999999999999999875 58999998875
No 182
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.21 E-value=7.7e-07 Score=66.01 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=46.8
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
++ ++||.|| ++||+.|+...|.+.++.+++++ ++.++.|.+|.. ....+++ ++..+|.-++.
T Consensus 24 ~~-~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~ 85 (140)
T 3hz4_A 24 KK-PVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN---PWTAEKY----GVQGTPTFKFF 85 (140)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC---HHHHHHH----TCCEESEEEEE
T ss_pred CC-cEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC---HhHHHHC----CCCcCCEEEEE
Confidence 44 8999999 99999999999999999999986 489999988763 2344444 44445533433
No 183
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.20 E-value=1.2e-06 Score=64.67 Aligned_cols=64 Identities=8% Similarity=0.101 Sum_probs=47.5
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
.+++ +||+|| ++||++|....|.+.++.+++++ ++.++.|++|.. ....+++ ++..+|..++..
T Consensus 49 ~~~~-vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~ 112 (140)
T 1v98_A 49 GAPL-TLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH---PGLAARY----GVRSVPTLVLFR 112 (140)
T ss_dssp CCCE-EEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC---HHHHHHT----TCCSSSEEEEEE
T ss_pred cCCC-EEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC---HHHHHHC----CCCccCEEEEEe
Confidence 3454 999999 99999999999999999999876 599999998763 2334444 444555445443
No 184
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.20 E-value=2.4e-06 Score=71.77 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=51.6
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCcc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (208)
+++||.|| ++||++|+...|.+.++++++++ .+.|+.|.+|... ..+..+++ ++.++|-.++.+.++
T Consensus 36 ~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~-~~~l~~~~----~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 36 YTSLVEFY-APWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNK-NKALCAKY----DVNGFPTLMVFRPPK 102 (298)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTT-THHHHHHT----TCCBSSEEEEEECCC
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCcc-CHHHHHhC----CCCccceEEEEECCc
Confidence 38999999 99999999999999999999976 4889999988432 34455555 665666666666544
No 185
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.20 E-value=1.8e-06 Score=61.21 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=44.6
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||+|| ++||++|+...|.+.++.+++. ++.++.|.++.. ....+++ ++..+|..++.
T Consensus 20 ~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~ 79 (110)
T 2l6c_A 20 SDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR---PELMKEL----GFERVPTLVFI 79 (110)
T ss_dssp SEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC---HHHHHHT----TCCSSCEEEEE
T ss_pred CCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC---HHHHHHc----CCcccCEEEEE
Confidence 48999999 9999999999999999888775 688888887642 3344444 55455655554
No 186
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.20 E-value=2.7e-06 Score=56.77 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=37.0
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
.+|++|| ++|||+|+...|.+.++.+++++ ++.++.|++|+.
T Consensus 4 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~ 45 (85)
T 1fo5_A 4 VKIELFT-SPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMEN 45 (85)
T ss_dssp EEEEEEE-CCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSS
T ss_pred eEEEEEe-CCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCC
Confidence 6789999 99999999999999999988874 699999998753
No 187
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.18 E-value=4.4e-07 Score=72.75 Aligned_cols=62 Identities=10% Similarity=0.171 Sum_probs=47.2
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
+++||.|| ++||++|+...|.+.++++++++ ++.++.|++|.... ..+++ ++..+|..++.+
T Consensus 31 k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~---l~~~~----~v~~~Pt~~~~~ 92 (222)
T 3dxb_A 31 GAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPG---TAPKY----GIRGIPTLLLFK 92 (222)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCTT---TGGGG----TCCSBSEEEEEE
T ss_pred CEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCHH---HHHHc----CCCcCCEEEEEE
Confidence 48999999 99999999999999999999986 48999999876322 22233 555566555554
No 188
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.18 E-value=3.2e-06 Score=56.45 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=43.5
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEE
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (208)
..|++|| ++|||+|+...|.+.++.+++.+ ++.++.|++|... +..+++ ++..+|..++
T Consensus 3 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~---~~~~~~----~v~~~Pt~~~ 61 (85)
T 1nho_A 3 VNIEVFT-SPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDR---EKAIEY----GLMAVPAIAI 61 (85)
T ss_dssp CCEEEES-CSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCG---GGGGGT----CSSCSSEEEE
T ss_pred EEEEEEE-CCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCH---HHHHhC----CceeeCEEEE
Confidence 3588898 99999999999999999998875 6899999887532 122222 5545555555
No 189
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.17 E-value=5.9e-07 Score=66.47 Aligned_cols=57 Identities=14% Similarity=0.154 Sum_probs=44.0
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++||+|| ++||++|+...|.|.++.+++. ++.++.|.++... ++ .++..+|--++.+
T Consensus 32 ~vvv~f~-a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~------~~----~~i~~~Pt~~~~~ 88 (135)
T 2dbc_A 32 WVVIHLY-RSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCI------EH----YHDNCLPTIFVYK 88 (135)
T ss_dssp EEEEEEC-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSC------SS----CCSSCCSEEEEES
T ss_pred EEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCc------cc----CCCCCCCEEEEEE
Confidence 8999999 9999999999999999998884 5888888887632 12 2454556555555
No 190
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.15 E-value=2.2e-06 Score=66.67 Aligned_cols=83 Identities=12% Similarity=0.017 Sum_probs=53.6
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHH-H--HHHHHHHhhCCeEEEEEeCCC-hhhHHHHHHHhhhcCCCCCCcc
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITA-F--SDRYTEFEKLNTEILGVSTDS-VFSHLAWVQTDRKSGGLGDLKY 174 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~-l--~~~~~~~~~~gv~vi~Vs~d~-~~~~~~~~~~~~~~~~~~~~~f 174 (208)
.+......|| +++|.|| ++||++|+...+. + .++.+.+++ ++.+|-|..|. ++....|.+......+..++|.
T Consensus 31 a~~~A~~~~K-pVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt 107 (173)
T 3ira_A 31 AFEKARKENK-PVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMTVCQIILGRGGWPL 107 (173)
T ss_dssp HHHHHHHHTC-CEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSE
T ss_pred HHHHHHHhCC-CEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcc
Confidence 3455555677 8999999 9999999986662 2 334444443 57777787764 3444444332222225567888
Q ss_pred eEEEcCccHH
Q 028461 175 PLIADITKSI 184 (208)
Q Consensus 175 ~~l~D~~~~v 184 (208)
.++.|++|++
T Consensus 108 ~v~l~~dG~~ 117 (173)
T 3ira_A 108 NIIMTPGKKP 117 (173)
T ss_dssp EEEECTTSCE
T ss_pred eeeECCCCCc
Confidence 8999987654
No 191
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.14 E-value=1.5e-06 Score=61.62 Aligned_cols=65 Identities=12% Similarity=0.161 Sum_probs=45.4
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhC--CeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL--NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~--gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
.++ +++|.|| ++||++|+...|.+.++.+++++. ++.++.|..+... ...+++ ++..+|..++..
T Consensus 23 ~~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~----~v~~~Pt~~~~~ 89 (120)
T 1mek_A 23 AHK-YLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES---DLAQQY----GVRGYPTIKFFR 89 (120)
T ss_dssp HCS-EEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC---SSHHHH----TCCSSSEEEEEE
T ss_pred cCC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH---HHHHHC----CCCcccEEEEEe
Confidence 354 8999999 999999999999999999998764 4667667665422 233333 444555555543
No 192
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.13 E-value=2.6e-06 Score=76.98 Aligned_cols=66 Identities=3% Similarity=-0.039 Sum_probs=52.3
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh--CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~--~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
+++||.|| ++||++|+...|.+.++++++++ .++.|+.|+++.. ...+..+++ ++.+++-.++.+.
T Consensus 31 k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~----~V~~~PTl~~f~~ 98 (519)
T 3t58_A 31 SAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREF----NIAGFPTVRFFQA 98 (519)
T ss_dssp SEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHT----TCCSBSEEEEECT
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHc----CCcccCEEEEEcC
Confidence 48999999 99999999999999999999986 4689999998742 344555555 6666776677764
No 193
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.40 E-value=3.6e-07 Score=63.33 Aligned_cols=42 Identities=19% Similarity=0.323 Sum_probs=36.4
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
++++|+|| ++|||.|+...+.+.++.+++++ ++.++.|+.|.
T Consensus 20 ~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 61 (106)
T 2yj7_A 20 KPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE 61 (106)
Confidence 48999999 99999999999999999988875 57888887765
No 194
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.10 E-value=1.8e-06 Score=62.39 Aligned_cols=43 Identities=26% Similarity=0.355 Sum_probs=37.8
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
.++ ++||+|| ++||+.|+...+.|.++.++++ ++.++.|++|.
T Consensus 35 ~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~ 77 (130)
T 1wmj_A 35 AGK-VVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE 77 (130)
T ss_dssp TTC-BCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT
T ss_pred cCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc
Confidence 465 8999999 9999999999999999999886 68888888875
No 195
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.07 E-value=1.6e-05 Score=52.15 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=39.2
Q ss_pred EEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEE
Q 028461 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 111 vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (208)
..|.|| ++||++|+...|.+.++.+++.. +++++.|. + .+..+++ ++..+|..++
T Consensus 2 ~~v~f~-a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~--~----~~~~~~~----~v~~~Pt~~~ 56 (77)
T 1ilo_A 2 MKIQIY-GTGCANCQMLEKNAREAVKELGI-DAEFEKIK--E----MDQILEA----GLTALPGLAV 56 (77)
T ss_dssp EEEEEE-CSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC--S----HHHHHHH----TCSSSSCEEE
T ss_pred cEEEEE-cCCChhHHHHHHHHHHHHHHcCC-ceEEEEec--C----HHHHHHC----CCCcCCEEEE
Confidence 358899 88999999999999999988764 56776665 2 2233444 5545665555
No 196
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.02 E-value=1.1e-06 Score=72.24 Aligned_cols=42 Identities=10% Similarity=0.100 Sum_probs=37.2
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
++ ++||.|| ++||++|+...|.|.+++++|. ++.|+.|.++.
T Consensus 133 ~k-~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~ 174 (245)
T 1a0r_P 133 IT-TIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN 174 (245)
T ss_dssp TC-EEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH
T ss_pred CC-EEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence 55 8999999 9999999999999999999986 48888887754
No 197
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.01 E-value=8.5e-08 Score=68.59 Aligned_cols=69 Identities=10% Similarity=0.119 Sum_probs=45.3
Q ss_pred ceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh-hhHHHHHHHhhhcCCCCCCcceE
Q 028461 98 INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV-FSHLAWVQTDRKSGGLGDLKYPL 176 (208)
Q Consensus 98 ~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~-~~~~~~~~~~~~~~~~~~~~f~~ 176 (208)
..+.|+++.|+ .+||.|| ++|||+|+...|.|.++.++++ .|-|..|+. +......+++ ++..+|--+
T Consensus 3 ~~~~la~~~~k-~~vV~F~-A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~----~V~~~PT~~ 71 (106)
T 3kp8_A 3 LAVGLAAHLRQ-IGGTMYG-AYWCPHCQDQKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEA----GITSYPTWI 71 (106)
T ss_dssp HHHHHHHHHHH-HTCEEEE-CTTCHHHHHHHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHT----TCCSSSEEE
T ss_pred HhhHHHHhcCC-CEEEEEE-CCCCHHHHHHHHHHHHHHHhCC-----EEEEecccccchhHHHHHHc----CCeEeCEEE
Confidence 35677788886 6899999 9999999999999998876553 333333322 1234445554 555555434
Q ss_pred E
Q 028461 177 I 177 (208)
Q Consensus 177 l 177 (208)
+
T Consensus 72 i 72 (106)
T 3kp8_A 72 I 72 (106)
T ss_dssp E
T ss_pred E
Confidence 4
No 198
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.01 E-value=2.1e-05 Score=62.30 Aligned_cols=61 Identities=16% Similarity=0.040 Sum_probs=45.1
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhh---CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEK---LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~---~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
.+++.|| ++||++|+...|.+.++++++++ .++.++.|.++. .....+++ ++.++|-.++.
T Consensus 136 ~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~---~~~l~~~~----~v~~~Pt~~~~ 199 (226)
T 1a8l_A 136 VRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE---YPEWADQY----NVMAVPKIVIQ 199 (226)
T ss_dssp EEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG---CHHHHHHT----TCCSSCEEEEE
T ss_pred cEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc---CHHHHHhC----CCcccCeEEEE
Confidence 4499999 99999999999999999999974 378888888764 23344444 55455554443
No 199
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.99 E-value=2.7e-06 Score=75.39 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=50.3
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhC-CeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccH
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~-gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (208)
++ ++||.|| ++||++|+...|.+.++++++++. ++.++.|..+..+.. +.+ ++.++|-.++.+.++.
T Consensus 370 ~k-~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~----~~~----~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 370 NK-DVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVP----SPY----EVRGFPTIYFSPANKK 437 (481)
T ss_dssp TC-EEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSCCC----TTC----CCCSSSEEEEECTTCT
T ss_pred CC-cEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchhhH----hhC----CCcccCEEEEEeCCCe
Confidence 55 8999999 999999999999999999999865 688888877653211 122 4556666667766554
No 200
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.96 E-value=2.2e-05 Score=63.87 Aligned_cols=65 Identities=14% Similarity=-0.074 Sum_probs=46.8
Q ss_pred cccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh---CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEE
Q 028461 104 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK---LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 104 d~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~---~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (208)
++.|+ ++|++|| ++|||+|+...|.+.+++.++++ .++.+..|.++.. ....+++ ++..+|-.++
T Consensus 135 ~~~~~-~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~---~~~~~~~----~V~~vPt~~i 202 (243)
T 2hls_A 135 SLKGR-VHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN---PDIADKY----GVMSVPSIAI 202 (243)
T ss_dssp HCCSC-EEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC---HHHHHHT----TCCSSSEEEE
T ss_pred HcCCC-cEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC---HHHHHHc----CCeeeCeEEE
Confidence 45565 7889999 99999999999999999999842 5788888877642 2233343 4445554444
No 201
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.95 E-value=3.1e-05 Score=61.74 Aligned_cols=65 Identities=11% Similarity=0.124 Sum_probs=48.9
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCC--eEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN--TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~g--v~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
++ +++|.|| ++||++|+...|.+.++.+++++++ +.++.|..+.. ..+.+++ ++.+++-.++.+.
T Consensus 147 ~~-~~~v~f~-a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~~ 213 (241)
T 3idv_A 147 AD-IILVEFY-APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE---TDLAKRF----DVSGYPTLKIFRK 213 (241)
T ss_dssp CS-EEEEEEE-CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC---HHHHHHT----TCCSSSEEEEEET
T ss_pred CC-eEEEEEE-CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC---HHHHHHc----CCcccCEEEEEEC
Confidence 44 8999999 9999999999999999999998654 78888877652 3455555 5555654455543
No 202
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.94 E-value=8.9e-06 Score=60.91 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=51.3
Q ss_pred cEEEEEEEcCCCC--CCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHH
Q 028461 109 KYVILFFYPLDFT--FVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (208)
Q Consensus 109 ~~vlL~f~~~t~C--p~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~ 186 (208)
+++||+|| ++|| ++|+...|.|.++.++|.+ .+.|+-|++|. ..+...++ ++..++--++.-..+.+.+
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe---~~~la~~y----gV~siPTlilFkdG~~v~~ 104 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEA---ERGLMARF----GVAVCPSLAVVQPERTLGV 104 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGG---HHHHHHHH----TCCSSSEEEEEECCEEEEE
T ss_pred CcEEEEEe-CCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCC---CHHHHHHc----CCccCCEEEEEECCEEEEE
Confidence 38999999 9999 9999999999999999975 58888888765 44555566 5555554444433333333
Q ss_pred HhCC
Q 028461 187 SYGV 190 (208)
Q Consensus 187 ~~gV 190 (208)
.-|+
T Consensus 105 ~vG~ 108 (137)
T 2qsi_A 105 IAKI 108 (137)
T ss_dssp EESC
T ss_pred EeCC
Confidence 3343
No 203
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.93 E-value=1e-05 Score=72.11 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=49.2
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhC-------CeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-------NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~-------gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
++||.|| ++||++|+...|.+.+++++++++ .+.++.|++|.. ....+++ ++..+|-.++.+.+
T Consensus 44 ~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~---~~la~~y----~V~~~PTlilf~~g 114 (470)
T 3qcp_A 44 PWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE---VDLCRKY----DINFVPRLFFFYPR 114 (470)
T ss_dssp CEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC---HHHHHHT----TCCSSCEEEEEEES
T ss_pred eEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC---HHHHHHc----CCCccCeEEEEECC
Confidence 8999999 999999999999999999999743 388999988763 3444554 56566666666543
No 204
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.93 E-value=5.1e-05 Score=64.63 Aligned_cols=61 Identities=7% Similarity=0.018 Sum_probs=45.5
Q ss_pred cEEEEEEEcCCCCCCChhhHHH-------HHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITA-------FSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~-------l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||.|| ++||+ |+...|. +.++.+++++.++.++.|.++.. ....+++ ++.++|-.++.
T Consensus 29 ~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~---~~l~~~~----~v~~~Pt~~~~ 96 (350)
T 1sji_A 29 DVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE---AKLAKKL----GFDEEGSLYVL 96 (350)
T ss_dssp SEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT---HHHHHHH----TCCSTTEEEEE
T ss_pred CeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC---HHHHHhc----CCCccceEEEE
Confidence 48999999 99999 9888888 88888888877899999988763 3344454 55455543333
No 205
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.89 E-value=6.1e-06 Score=59.92 Aligned_cols=44 Identities=9% Similarity=0.227 Sum_probs=33.2
Q ss_pred CCcEEEEEEEcCCCCC--------------CChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 107 GKKYVILFFYPLDFTF--------------VCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp--------------~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
|| ++||.|| ++||+ +|+...|.+.++.+++++ ++.++.|++|..
T Consensus 21 ~k-~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~ 78 (123)
T 1oaz_A 21 DG-AILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN 78 (123)
T ss_dssp SS-EEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC
T ss_pred CC-eEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 44 8999999 99999 999999999999988876 589999988763
No 206
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.89 E-value=5e-06 Score=62.51 Aligned_cols=74 Identities=11% Similarity=-0.021 Sum_probs=50.8
Q ss_pred cEEEEEEEcCCC--CCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHH
Q 028461 109 KYVILFFYPLDF--TFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (208)
Q Consensus 109 ~~vlL~f~~~t~--Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~ 186 (208)
+++|++|| ++| |++|+...|.|.++.++|.++.+.|+-|++|. ..+..+++ ++..++--++.-..+.+.+
T Consensus 35 ~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe---~~~lA~~y----gV~sIPTlilFk~G~~v~~ 106 (140)
T 2qgv_A 35 PDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ---SEAIGDRF----GAFRFPATLVFTGGNYRGV 106 (140)
T ss_dssp SSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH---HHHHHHHH----TCCSSSEEEEEETTEEEEE
T ss_pred CCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC---CHHHHHHc----CCccCCEEEEEECCEEEEE
Confidence 37888998 998 99999999999999999976447887777764 44555666 6555554444433333444
Q ss_pred HhCC
Q 028461 187 SYGV 190 (208)
Q Consensus 187 ~~gV 190 (208)
.-|+
T Consensus 107 ~~G~ 110 (140)
T 2qgv_A 107 LNGI 110 (140)
T ss_dssp EESC
T ss_pred EecC
Confidence 4443
No 207
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.85 E-value=1.2e-05 Score=58.56 Aligned_cols=40 Identities=20% Similarity=0.263 Sum_probs=36.7
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
++|+.|| ++||++|+...|.|.++.++|. ++.++-|.+|.
T Consensus 25 ~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~ 64 (118)
T 3evi_A 25 WVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS 64 (118)
T ss_dssp EEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG
T ss_pred eEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH
Confidence 8999999 9999999999999999999986 58898888876
No 208
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.82 E-value=2.1e-06 Score=65.39 Aligned_cols=78 Identities=9% Similarity=-0.001 Sum_probs=46.6
Q ss_pred ccccCCcEEEEEEEcCCCCCCChhhHHHHHHHH--HHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRY--TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~--~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
....|| +++|+|| ++||++|+...|.+.+.. .++.+ ..++.|.+|+..... ....+..++|-.++.|+
T Consensus 40 A~~~~K-pVlV~F~-A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~~~~------~~~~~v~~~PT~~f~~~ 109 (151)
T 3ph9_A 40 AQKSKK-PLMVIHH-LEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHETTDK------NLSPDGQYVPRIMFVDP 109 (151)
T ss_dssp HHHHTC-CEEEEEC-CTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCCSCG------GGCTTCCCSSEEEEECT
T ss_pred HHHcCC-cEEEEEE-CCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCchhh------HhhcCCCCCCEEEEECC
Confidence 334576 8999999 999999999998887632 22222 235556665311000 11123346777788886
Q ss_pred ccH-HHHHhCC
Q 028461 181 TKS-ISKSYGV 190 (208)
Q Consensus 181 ~~~-v~~~~gV 190 (208)
+|+ +.+..|.
T Consensus 110 ~G~~v~~~~G~ 120 (151)
T 3ph9_A 110 SLTVRADIAGR 120 (151)
T ss_dssp TSCBCTTCCCS
T ss_pred CCCEEEEEeCC
Confidence 654 4445565
No 209
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.80 E-value=4.5e-05 Score=68.00 Aligned_cols=63 Identities=8% Similarity=0.096 Sum_probs=49.9
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++++|.|| ++||++|+...|.+.++.+++++.++.++.|..+.. ....+++ ++.++|-.++.+
T Consensus 32 ~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~---~~l~~~~----~v~~~Pt~~~~~ 94 (504)
T 2b5e_A 32 DLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN---QDLCMEH----NIPGFPSLKIFK 94 (504)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC---HHHHHHT----TCCSSSEEEEEE
T ss_pred CeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHhc----CCCcCCEEEEEe
Confidence 48999999 999999999999999999999877899999988753 3455555 565566545554
No 210
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=97.74 E-value=3.8e-06 Score=67.49 Aligned_cols=41 Identities=10% Similarity=0.100 Sum_probs=36.5
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
|+ ++||.|| ++||++|+...|.|.++.++|. ++.|+.|.++
T Consensus 120 ~k-~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 120 VT-TIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp TC-EEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred Cc-EEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 45 8999999 9999999999999999998885 6888888875
No 211
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.72 E-value=0.00018 Score=54.68 Aligned_cols=70 Identities=19% Similarity=0.151 Sum_probs=48.9
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc-
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT- 181 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~- 181 (208)
.+| +++|+|+ ++||+.|+..-... .++.+.++ +++.++-+.+|++ ...++.+.+ ++.+++..++.|++
T Consensus 41 ~~K-~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~-~~fv~v~~d~~~~-~~~~l~~~y----~v~~~P~~~fld~~~ 112 (153)
T 2dlx_A 41 QNK-WLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIR-EHFIFWQVYHDSE-EGQRYIQFY----KLGDFPYVSILDPRT 112 (153)
T ss_dssp HTC-EEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHH-HTEEEEEEESSSH-HHHHHHHHH----TCCSSSEEEEECTTT
T ss_pred cCC-eEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHH-cCeEEEEEecCCH-hHHHHHHHc----CCCCCCEEEEEeCCC
Confidence 466 9999999 99999998654332 22223333 3788888888764 345677777 66678888889997
Q ss_pred cH
Q 028461 182 KS 183 (208)
Q Consensus 182 ~~ 183 (208)
++
T Consensus 113 G~ 114 (153)
T 2dlx_A 113 GQ 114 (153)
T ss_dssp CC
T ss_pred Cc
Confidence 53
No 212
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.69 E-value=0.00011 Score=58.44 Aligned_cols=58 Identities=10% Similarity=-0.007 Sum_probs=43.5
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEE
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (208)
.+|+.|| ++||++|+...|.+.++..++. ++.++.|.++. .....+++ ++.++|-.++
T Consensus 138 ~~~v~F~-a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~---~~~l~~~~----~v~~~Pt~~~ 195 (229)
T 2ywm_A 138 IEIWVFV-TTSCGYCPSAAVMAWDFALAND--YITSKVIDASE---NQDLAEQF----QVVGVPKIVI 195 (229)
T ss_dssp EEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG---CHHHHHHT----TCCSSSEEEE
T ss_pred eEEEEEE-CCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC---CHHHHHHc----CCcccCEEEE
Confidence 5588899 9999999999999999998883 78888888764 23344444 5555555555
No 213
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.67 E-value=2.8e-05 Score=58.22 Aligned_cols=70 Identities=10% Similarity=0.061 Sum_probs=42.7
Q ss_pred EEEEEEEcCCC--CCCChhhHHHHHHHHHHHhhCCeE--EEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHH-
Q 028461 110 YVILFFYPLDF--TFVCPTEITAFSDRYTEFEKLNTE--ILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI- 184 (208)
Q Consensus 110 ~vlL~f~~~t~--Cp~C~~~~~~l~~~~~~~~~~gv~--vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v- 184 (208)
.+|++|| ++| |++|+...|.|.++.++| + ++. ++.|++|. ..+..+++ ++..+|-.++. .+|+.
T Consensus 36 ~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~---~~~la~~~----~V~~iPT~~~f-k~G~~v 104 (142)
T 2es7_A 36 DGVILLS-SDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQ---SEAIGDRF----NVRRFPATLVF-TDGKLR 104 (142)
T ss_dssp SEEEEEC-CCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHH---HHHHHHTT----TCCSSSEEEEE-SCC---
T ss_pred CEEEEEE-CCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCC---CHHHHHhc----CCCcCCeEEEE-eCCEEE
Confidence 4677787 766 999999999999999998 3 577 88887764 23334444 66667766666 34443
Q ss_pred HHHhCC
Q 028461 185 SKSYGV 190 (208)
Q Consensus 185 ~~~~gV 190 (208)
.+..|.
T Consensus 105 ~~~~G~ 110 (142)
T 2es7_A 105 GALSGI 110 (142)
T ss_dssp -CEESC
T ss_pred EEEeCC
Confidence 333343
No 214
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.66 E-value=4e-05 Score=65.25 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=45.9
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhC-CeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~-gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
+.++|.|| ++||++|+...|.+.++.++++++ ++.++.|..+... .+.+ ++.++|-.++.+.
T Consensus 268 k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~-----~~~~----~v~~~Pt~~~~~~ 330 (361)
T 3uem_A 268 KNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE-----VEAV----KVHSFPTLKFFPA 330 (361)
T ss_dssp CEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB-----CSSC----CCCSSSEEEEECS
T ss_pred CcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc-----hhhc----CCcccCeEEEEEC
Confidence 48999999 999999999999999999999864 5777777665432 1222 5556666566643
No 215
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.65 E-value=3.6e-05 Score=61.36 Aligned_cols=45 Identities=16% Similarity=0.019 Sum_probs=35.0
Q ss_pred EecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 100 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 100 v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
+.+.+..++ ++|++|| ..|||+|+...+.+.++.+ .+++|+.+..
T Consensus 79 ~~~g~~~~k-~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~ 123 (216)
T 1eej_A 79 IVYKAPQEK-HVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLAF 123 (216)
T ss_dssp EEECCTTCC-EEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred eeecCCCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 445555565 8999999 9999999999999887653 3788887754
No 216
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.65 E-value=0.00011 Score=52.93 Aligned_cols=41 Identities=12% Similarity=0.088 Sum_probs=35.3
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
+++||+|+ ++|||+|+...|.+.++.++ .++.++-|.+|..
T Consensus 25 ~~vvi~kh-atwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~ 65 (112)
T 3iv4_A 25 KYVFVLKH-SETCPISANAYDQFNKFLYE---RDMDGYYLIVQQE 65 (112)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGG
T ss_pred CCEEEEEE-CCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecC
Confidence 48999998 99999999999999998874 3688998988764
No 217
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.65 E-value=8.9e-05 Score=63.95 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=44.3
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh-----CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcc
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKY 174 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~-----~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f 174 (208)
++ ++||.|| ++||++|+...|.+.++++++++ .++.++.|..+.. ....+++ ++.+++-
T Consensus 22 ~~-~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~---~~l~~~~----~v~~~Pt 85 (382)
T 2r2j_A 22 AD-VALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH---SDIAQRY----RISKYPT 85 (382)
T ss_dssp CS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC---HHHHHHT----TCCEESE
T ss_pred CC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc---HHHHHhc----CCCcCCE
Confidence 44 8999999 99999999999999999999963 3478888887652 3344554 5544443
No 218
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.61 E-value=4.3e-05 Score=58.34 Aligned_cols=47 Identities=9% Similarity=0.048 Sum_probs=37.0
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEe
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS 149 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs 149 (208)
.+.+.+-.++ ++|+.|| ..|||+|....+.+.++.+++.+ ++|+.+.
T Consensus 14 ~~~~G~~~a~-v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 14 APVLGNPEGD-VTVVEFF-DYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp SCEEECTTCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCcCCCCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 4556666676 8899998 89999999999999999888754 5555544
No 219
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.58 E-value=0.00011 Score=69.04 Aligned_cols=68 Identities=3% Similarity=-0.037 Sum_probs=50.4
Q ss_pred cccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 102 Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
+.++.|+ +++|.|| ++||++|+..+|.|.++++++++ ++.++.|+.+... ...+.+ ++.++|-.++.+
T Consensus 450 ~~~~~~~-~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~---~~~~~~----~v~~~Pt~~~~~ 517 (780)
T 3apo_A 450 FPASDKE-PWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHE---GLCNMY----NIQAYPTTVVFN 517 (780)
T ss_dssp SCTTCCS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCH---HHHHHT----TCCSSSEEEEEE
T ss_pred HHHcCCC-eEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCH---HHHHHc----CCCcCCeEEEEc
Confidence 3344565 8999999 99999999999999999999975 5899999887532 233444 555555445544
No 220
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.54 E-value=0.00028 Score=54.95 Aligned_cols=65 Identities=9% Similarity=0.056 Sum_probs=47.1
Q ss_pred cEEEEEEEcC-------CCCCCChhhHHHHHHHHHHHhh----CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEE
Q 028461 109 KYVILFFYPL-------DFTFVCPTEITAFSDRYTEFEK----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 109 ~~vlL~f~~~-------t~Cp~C~~~~~~l~~~~~~~~~----~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (208)
.++||.|| + .||++|+...|.+.++.++|.. ..+.|.-|.+|. ..+..+++ ++..++--++
T Consensus 38 ~~vvV~F~-A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~---~~~la~~~----~I~siPtl~~ 109 (178)
T 3ga4_A 38 YFNILYIT-MRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE---VPQLVKDL----KLQNVPHLVV 109 (178)
T ss_dssp CEEEEEEE-CCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT---CHHHHHHT----TCCSSCEEEE
T ss_pred CcEEEEEe-CCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc---CHHHHHHc----CCCCCCEEEE
Confidence 37999999 5 4999999999999999999972 347777777775 34455555 6666665555
Q ss_pred EcCc
Q 028461 178 ADIT 181 (208)
Q Consensus 178 ~D~~ 181 (208)
.-+.
T Consensus 110 F~~g 113 (178)
T 3ga4_A 110 YPPA 113 (178)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 5433
No 221
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.42 E-value=0.00016 Score=56.15 Aligned_cols=43 Identities=16% Similarity=0.131 Sum_probs=36.8
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
.++ ++|+.|| ..|||+|....+.+.++.+++.+ ++.++-+.++
T Consensus 24 ~~~-~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGK-IEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCC-eEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 355 8899999 99999999999999999988876 6888888775
No 222
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.39 E-value=0.00019 Score=63.42 Aligned_cols=56 Identities=7% Similarity=0.124 Sum_probs=44.0
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~ 173 (208)
+++||.|| ++||++|+...|.+.++.++++++ +.++.|..+. .....+++ ++.++|
T Consensus 22 ~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~---~~~l~~~~----~v~~~P 77 (481)
T 3f8u_A 22 GLMLVEFF-APWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA---NTNTCNKY----GVSGYP 77 (481)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT---CHHHHHHT----TCCEES
T ss_pred CeEEEEEE-CCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC---CHHHHHhc----CCCCCC
Confidence 48999999 999999999999999999999875 7888888875 23344554 554444
No 223
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.36 E-value=0.00012 Score=68.74 Aligned_cols=61 Identities=10% Similarity=-0.008 Sum_probs=46.9
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||.|| ++||++|+...|.+.++++++++ ++.++.|.++.. ....+.+ ++.++|-.++.
T Consensus 676 ~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~---~~~~~~~----~v~~~Pt~~~~ 736 (780)
T 3apo_A 676 THWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAY---PQTCQKA----GIKAYPSVKLY 736 (780)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC---HHHHHHT----TCCSSSEEEEE
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCC---HHHHHhc----CCCcCCEEEEE
Confidence 48999999 99999999999999999999976 689999988753 2344444 55555654454
No 224
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.34 E-value=9e-05 Score=51.95 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=38.9
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
.-.|.....+...|++|+ ..|||+|....+.|.++. +++.+.-|.+|+++. .++.+++
T Consensus 6 ~~~l~~~~~~~~~v~~f~-~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~~~-~el~~~~ 63 (100)
T 1wjk_A 6 SGNLSASNRALPVLTLFT-KAPCPLCDEAKEVLQPYK-----DRFILQEVDITLPEN-STWYERY 63 (100)
T ss_dssp CCCCCCSCCCCCEEEEEE-CSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSSTT-HHHHHHS
T ss_pred chhhhhccCCCCEEEEEe-CCCCcchHHHHHHHHHhh-----hCCeEEEEECCCcch-HHHHHHH
Confidence 334444333446788888 899999998888776542 358888889884333 5566665
No 225
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.33 E-value=0.00015 Score=64.67 Aligned_cols=44 Identities=11% Similarity=0.264 Sum_probs=36.3
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhh--CCeEEEEEeCCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDS 152 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~--~gv~vi~Vs~d~ 152 (208)
++ ++||.|| ++||++|+...|.+.++.++++. .++.++.|..+.
T Consensus 376 ~k-~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~ 421 (504)
T 2b5e_A 376 KK-DVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE 421 (504)
T ss_dssp TC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG
T ss_pred CC-CEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc
Confidence 54 8999999 99999999999999999999973 356666666543
No 226
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.19 E-value=0.0015 Score=51.41 Aligned_cols=65 Identities=8% Similarity=-0.032 Sum_probs=44.2
Q ss_pred ccCCcEEEEEEEcCC-CCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 105 YIGKKYVILFFYPLD-FTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 105 ~~gk~~vlL~f~~~t-~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
..++ .+|++|| +. ||++|+...|.+.++.+. . .++.++.|.++.++. .+..+++ ++..+|--++.
T Consensus 20 ~~~~-v~lv~f~-~~~~C~~C~~~~~~~~~la~~-~-~~v~~~~vd~~~~~~-~~~~~~~----~v~~~Pt~~~~ 85 (226)
T 1a8l_A 20 MVNP-VKLIVFV-RKDHCQYCDQLKQLVQELSEL-T-DKLSYEIVDFDTPEG-KELAKRY----RIDRAPATTIT 85 (226)
T ss_dssp CCSC-EEEEEEE-CSSSCTTHHHHHHHHHHHHTT-C-TTEEEEEEETTSHHH-HHHHHHT----TCCSSSEEEEE
T ss_pred cCCC-eEEEEEe-cCCCCchhHHHHHHHHHHHhh-C-CceEEEEEeCCCccc-HHHHHHc----CCCcCceEEEE
Confidence 3343 6778888 88 999999999999997754 2 368888888876322 4445555 55555544443
No 227
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.18 E-value=0.00019 Score=50.77 Aligned_cols=24 Identities=13% Similarity=0.142 Sum_probs=19.7
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHH
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRY 135 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~ 135 (208)
.+++ || ++|||+|+...+.|.++.
T Consensus 21 ~vv~-f~-a~~C~~C~~~~~~l~~~~ 44 (116)
T 2e7p_A 21 PVVV-FS-KTYCGYCNRVKQLLTQVG 44 (116)
T ss_dssp SEEE-EE-CTTCHHHHHHHHHHHHHT
T ss_pred CEEE-EE-CCCChhHHHHHHHHHHcC
Confidence 4555 88 999999999999887763
No 228
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.15 E-value=0.00038 Score=46.23 Aligned_cols=48 Identities=15% Similarity=0.077 Sum_probs=32.0
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
+..|| ++|||+|+...+.+.++.++ .|+++..+.+|......+..+++
T Consensus 4 ~~~f~-~~~C~~C~~~~~~l~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~ 51 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSAEQAVANAIDP---SKYTVEIVHLGTDKARIAEAEKA 51 (80)
T ss_dssp EEEEE-ECSCHHHHHHHHHHHHHSCT---TTEEEEEEETTTCSSTHHHHHHH
T ss_pred eEEEe-CCCCCchHHHHHHHHHHHHh---cCCeEEEEEecCChhhHHHHHHc
Confidence 56677 89999999999998877544 45666666666421233344444
No 229
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.10 E-value=0.0004 Score=46.21 Aligned_cols=49 Identities=10% Similarity=-0.074 Sum_probs=34.9
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChh-hHHHHHHHh
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF-SHLAWVQTD 163 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~-~~~~~~~~~ 163 (208)
|+.|+ .+|||.|....+.|.++..+++ |+.+..|.++... ...++.+..
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~~~~~~~~~l~~~~ 52 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIRAEGITKEDLQQKA 52 (85)
T ss_dssp EEEEC-CTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHHHHTCCSHHHHHHT
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHhcCC--CceEEEEecccChHHHHHHHHHh
Confidence 56677 8999999999999998877654 6888888775422 223444444
No 230
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=96.95 E-value=0.0033 Score=53.88 Aligned_cols=62 Identities=10% Similarity=-0.041 Sum_probs=43.6
Q ss_pred cEEEEEEEcCCCCCCChhhH------HHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 109 KYVILFFYPLDFTFVCPTEI------TAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~------~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+++||.|| +.||++|...- |.+.+..+++++.++.+..|.++. .....+++ ++.++|-.++.
T Consensus 31 ~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~---~~~l~~~~----~V~~~PTl~~f 98 (367)
T 3us3_A 31 EVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK---DAAVAKKL----GLTEEDSIYVF 98 (367)
T ss_dssp SEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---THHHHHHH----TCCSTTEEEEE
T ss_pred CeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc---cHHHHHHc----CCCcCceEEEE
Confidence 48999999 99999884332 578888888887778998898875 33455555 55555543443
No 231
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.88 E-value=0.00073 Score=48.22 Aligned_cols=54 Identities=9% Similarity=0.074 Sum_probs=39.5
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEE
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (208)
..|+.|| ..|||+|....+.|.++.+++ |+++.-|.+|... ++.+++ +..+|.+
T Consensus 30 ~~vv~y~-~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~d~---~l~~~y-------gv~VP~l 83 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEMIASLRVLQKKS---WFELEVINIDGNE---HLTRLY-------NDRVPVL 83 (107)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTTCH---HHHHHS-------TTSCSEE
T ss_pred cEEEEEe-CCCChhHHHHHHHHHHHHHhc---CCeEEEEECCCCH---HHHHHh-------CCCCceE
Confidence 3577888 899999999999999887664 5778788887422 244454 3457776
No 232
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.79 E-value=0.001 Score=51.43 Aligned_cols=42 Identities=7% Similarity=0.050 Sum_probs=35.1
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
.++ ++|+.|| ..|||+|....+.+.++.+++.+ ++.+.-+.+
T Consensus 24 ~~~-~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGK-IEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCC-CEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 455 8899999 89999999999999999888876 677776665
No 233
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.69 E-value=0.0022 Score=42.15 Aligned_cols=54 Identities=13% Similarity=0.222 Sum_probs=34.8
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
|+.|+ .+|||+|+...+.|.+ .|+++..|.++......++.++. +. ..+|.+.+
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~~~~~~~~~~~~----g~--~~vP~~~~ 56 (81)
T 1h75_A 3 ITIYT-RNDCVQCHATKRAMEN-------RGFDFEMINVDRVPEAAEALRAQ----GF--RQLPVVIA 56 (81)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHT----TC--CSSCEEEE
T ss_pred EEEEc-CCCChhHHHHHHHHHH-------CCCCeEEEECCCCHHHHHHHHHh----CC--CccCEEEE
Confidence 55677 8999999987776654 46778888887543444444433 33 34565554
No 234
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.58 E-value=0.0045 Score=55.46 Aligned_cols=58 Identities=7% Similarity=0.067 Sum_probs=42.6
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEE
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (208)
..|.+|| +.|||+|+...|.+.++..++. ++.+.-|.+|. ..+..+++ ++..+|-.++
T Consensus 119 ~~i~~f~-a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~---~~~~~~~~----~i~svPt~~i 176 (521)
T 1hyu_A 119 FEFETYY-SLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT---FQNEITER----NVMGVPAVFV 176 (521)
T ss_dssp EEEEEEE-CTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT---CHHHHHHT----TCCSSSEEEE
T ss_pred cceEEEE-CCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh---hHHHHHHh----CCCccCEEEE
Confidence 6788888 9999999999999999987765 68888887764 33445554 4444544444
No 235
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.51 E-value=5.4e-05 Score=55.02 Aligned_cols=75 Identities=8% Similarity=-0.017 Sum_probs=42.2
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHH-hhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHh
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEF-EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~-~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~ 188 (208)
.+||.|| ++||++|+..-+.+...++.. ..+++.++-|.+|... ...|...+ ++...|--++.+...++.+.-
T Consensus 20 ~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~-~~~la~~~----~V~g~PT~i~f~~G~ev~Ri~ 93 (116)
T 3dml_A 20 LRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPL-PPGLELAR----PVTFTPTFVLMAGDVESGRLE 93 (116)
T ss_dssp EEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCC-CTTCBCSS----CCCSSSEEEEEETTEEEEEEE
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCC-chhHHHHC----CCCCCCEEEEEECCEEEeeec
Confidence 7999999 999999998766544333221 1123677778877631 11222222 444555445555444555444
Q ss_pred CC
Q 028461 189 GV 190 (208)
Q Consensus 189 gV 190 (208)
|.
T Consensus 94 G~ 95 (116)
T 3dml_A 94 GY 95 (116)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 236
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.41 E-value=0.0017 Score=44.41 Aligned_cols=50 Identities=16% Similarity=0.275 Sum_probs=32.6
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
|+.|| ++||++|....+.|.++..++ +.-|.+|.. .++.+++ +..+|.+.
T Consensus 3 vv~f~-a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~---~~l~~~~-------g~~vPtl~ 52 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQAVEALAQARAGA------FFSVFIDDD---AALESAY-------GLRVPVLR 52 (87)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHTTCCC------EEEEECTTC---HHHHHHH-------TTTCSEEE
T ss_pred EEEEE-CCCCchHHHHHHHHHHHHHhh------eEEEECCCC---HHHHHHh-------CCCcCeEE
Confidence 67788 999999999888887653321 445677642 2355555 33466665
No 237
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.27 E-value=0.0058 Score=39.24 Aligned_cols=54 Identities=13% Similarity=0.127 Sum_probs=34.8
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
++.|+ ..|||.|+...+.|.+ .|+++..+.++......++.+.. +. ..+|.+.+
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~-------~~i~~~~~di~~~~~~~~~~~~~----~~--~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYT-KPACVQCTATKKALDR-------AGLAYNTVDISLDDEARDYVMAL----GY--VQAPVVEV 56 (75)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHT----TC--BCCCEEEE
T ss_pred EEEEe-CCCChHHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHc----CC--CccCEEEE
Confidence 45566 8999999987777654 36777778887644444444443 33 35666655
No 238
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=96.21 E-value=0.0033 Score=45.75 Aligned_cols=43 Identities=2% Similarity=-0.137 Sum_probs=35.9
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
+..++++.|| ++ |.+|+...|.|.++.++|+++ +.++-|.+|.
T Consensus 22 ~~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~ 64 (133)
T 2djk_A 22 AGIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA 64 (133)
T ss_dssp TTSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT
T ss_pred CCCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH
Confidence 3347999999 78 899999999999999999764 7888888775
No 239
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.20 E-value=0.0085 Score=46.06 Aligned_cols=43 Identities=14% Similarity=0.079 Sum_probs=35.3
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
.++ .+|++|| ..|||+|....+.+.++.+++.. ++.+..+.+.
T Consensus 21 ~~~-~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGK-IEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVV 63 (195)
T ss_dssp SSS-EEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECC
T ss_pred CCC-cEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccc
Confidence 355 7888888 88999999999999999988865 6887777653
No 240
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.15 E-value=0.011 Score=44.70 Aligned_cols=50 Identities=8% Similarity=-0.047 Sum_probs=37.9
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhC-CeEEEEEeC
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVST 150 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~-gv~vi~Vs~ 150 (208)
.+.+.+..++ .+|+.|+ ..+||+|....+.+.++.++|.+. +++++...+
T Consensus 19 ~~~~G~~~a~-v~i~~f~-D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGESNAP-VKMIEFI-NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCTTCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCCCCC-eEEEEEE-CCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 3455555665 6788887 788999999999999988888432 588877655
No 241
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=95.98 E-value=0.0065 Score=46.59 Aligned_cols=42 Identities=12% Similarity=0.025 Sum_probs=33.8
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
.++ .+|++|| ..+||.|....+.+.++.+++.+ ++++..+.+
T Consensus 24 ~a~-v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGK-IEVVEIF-GYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCC-eEEEEEE-CCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 454 6788888 78899999999999998888764 577776665
No 242
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.97 E-value=0.016 Score=46.92 Aligned_cols=50 Identities=10% Similarity=0.052 Sum_probs=38.5
Q ss_pred cEEEEEEEcC--CCCCCChhhHHHHHHHHHHHhh-CCeEEEEEeCCC--hhhHHHHHHHh
Q 028461 109 KYVILFFYPL--DFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDS--VFSHLAWVQTD 163 (208)
Q Consensus 109 ~~vlL~f~~~--t~Cp~C~~~~~~l~~~~~~~~~-~gv~vi~Vs~d~--~~~~~~~~~~~ 163 (208)
+++||.|| + +||+ ..|.+.++.+++++ .++.|.-|.+|+ ........+++
T Consensus 23 ~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~ 77 (240)
T 2qc7_A 23 KFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKY 77 (240)
T ss_dssp SEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHT
T ss_pred CCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHc
Confidence 48999999 8 8988 88999999999874 468888888765 33455666666
No 243
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.91 E-value=0.0053 Score=47.72 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=35.2
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
++ ++|+.|| ..|||+|....+.+.++.+++.+ ++.+.-+.++
T Consensus 24 ~~-v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 24 GK-VEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TS-EEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CC-cEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 55 7899998 89999999999999999888876 6777777664
No 244
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=95.83 E-value=0.039 Score=44.35 Aligned_cols=46 Identities=7% Similarity=-0.040 Sum_probs=33.3
Q ss_pred EecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 100 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 100 v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
+.+.+-.++ .+|++|+ ..|||+|+...+.+.++.++ .+++|+.+.+
T Consensus 90 i~~G~~~ak-~~v~~F~-D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~ 135 (241)
T 1v58_A 90 LLDGKKDAP-VIVYVFA-DPFCPYCKQFWQQARPWVDS---GKVQLRTLLV 135 (241)
T ss_dssp EEESCTTCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHT---TSEEEEEEEC
T ss_pred ceECCCCCC-eEEEEEE-CCCChhHHHHHHHHHHHHhC---CcEEEEEEEC
Confidence 444444455 7888888 89999999999998876653 3577776654
No 245
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=95.81 E-value=0.026 Score=47.56 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=39.1
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
.+++.|+ ..||+.|....+.+.+++++|+++ +.++.|..+.. ......+..
T Consensus 137 ~~~v~F~-~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~-~~~~~~~~f 187 (361)
T 3uem_A 137 THILLFL-PKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHT-DNQRILEFF 187 (361)
T ss_dssp EEEEEEC-CSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSG-GGHHHHHHT
T ss_pred cEEEEEE-eCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChH-HHHHHHHHc
Confidence 5678888 899999999999999999999864 77777776632 244455555
No 246
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=95.72 E-value=0.019 Score=39.77 Aligned_cols=58 Identities=14% Similarity=0.135 Sum_probs=34.3
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC--ChhhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD--SVFSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d--~~~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
|+.|+ .+|||.|+...+.|.++ |+++-.+.+| +.+...++.+..++..+. ..+|.+..
T Consensus 24 v~ly~-~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~--~~vP~l~i 83 (103)
T 3nzn_A 24 VIMYG-LSTCVWCKKTKKLLTDL-------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPS--VSFPTTII 83 (103)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHH-------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTT--CCSCEEEE
T ss_pred EEEEc-CCCCchHHHHHHHHHHc-------CCCcEEEEeeccCcccHHHHHHHHHHhCCC--CccCEEEE
Confidence 55566 89999999988777654 4444445554 444555555544333233 34565544
No 247
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=95.69 E-value=0.016 Score=45.57 Aligned_cols=54 Identities=9% Similarity=-0.068 Sum_probs=35.4
Q ss_pred CCCCCCChhhHHHHHHHHHHHhh-CCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 118 LDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 118 ~t~Cp~C~~~~~~l~~~~~~~~~-~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+.||+.|+..+|.+.++++++.+ ..+.+..|..+. ..+..+++ ++.++|-.++.
T Consensus 34 ~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~---~~~l~~~~----~v~~~Ptl~~~ 88 (229)
T 2ywm_A 34 CESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT---HKEETEKY----GVDRVPTIVIE 88 (229)
T ss_dssp CGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT---CHHHHHHT----TCCBSSEEEEE
T ss_pred CcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc---cHHHHHHc----CCCcCcEEEEE
Confidence 56677778889999999888853 357887776654 44455555 55555533443
No 248
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.65 E-value=0.017 Score=39.82 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=29.1
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
|..|. .+|||+|......|. ++|+.+.-+.++......+++.+.
T Consensus 6 I~vYs-~~~Cp~C~~aK~~L~-------~~gi~y~~idi~~d~~~~~~~~~~ 49 (92)
T 2lqo_A 6 LTIYT-TSWCGYCLRLKTALT-------ANRIAYDEVDIEHNRAAAEFVGSV 49 (92)
T ss_dssp EEEEE-CTTCSSHHHHHHHHH-------HTTCCCEEEETTTCHHHHHHHHHH
T ss_pred EEEEc-CCCCHhHHHHHHHHH-------hcCCceEEEEcCCCHHHHHHHHHH
Confidence 34444 899999987665553 458888888887654555555543
No 249
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.63 E-value=0.016 Score=42.15 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=23.4
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
|++|+ ..|||+|+...+.|.++ ++.+..|.+|..
T Consensus 29 vvvf~-~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~~ 62 (130)
T 2cq9_A 29 VVIFS-KTSCSYCTMAKKLFHDM-------NVNYKVVELDLL 62 (130)
T ss_dssp EEEEE-CSSCSHHHHHHHHHHHH-------TCCCEEEETTTS
T ss_pred EEEEE-cCCChHHHHHHHHHHHc-------CCCcEEEECcCC
Confidence 33376 89999999887777654 455556666643
No 250
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.44 E-value=0.0023 Score=50.25 Aligned_cols=43 Identities=12% Similarity=0.151 Sum_probs=34.8
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d 151 (208)
.++ ++|+.|| ..|||+|....|.+ .++.+++.+ ++.+.-+.++
T Consensus 112 ~~~-~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGA-PQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTC-CSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCC-CEEEEEE-CCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 355 7899999 89999999999988 888777764 6777777775
No 251
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.31 E-value=0.011 Score=46.66 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=29.6
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
.++ ++|+.|| ..|||+|+...+.+.++.+ .|++|..+..
T Consensus 85 ~~k-~~vv~F~-d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~~ 123 (211)
T 1t3b_A 85 NEK-HVVTVFM-DITCHYCHLLHQQLKEYND----LGITVRYLAF 123 (211)
T ss_dssp TCS-EEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred CCC-EEEEEEE-CCCCHhHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 344 7899998 9999999999998887532 3687776543
No 252
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.14 E-value=0.02 Score=39.35 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=17.3
Q ss_pred EEEEEcCCCCCCChhhHHHHHHH
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDR 134 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~ 134 (208)
|++|+ .+|||+|+...+.|.++
T Consensus 14 v~~f~-~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 14 VVVFI-KPTCPFCRKTQELLSQL 35 (105)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHS
T ss_pred EEEEE-cCCCHhHHHHHHHHHHc
Confidence 55677 89999999887777654
No 253
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=95.10 E-value=0.073 Score=43.28 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=37.7
Q ss_pred cEEEEEEEc-CCCCCCChhhHHHHHHHHHHHhh--CCeEEEEEeCCC--hhhHHHHHHHh
Q 028461 109 KYVILFFYP-LDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDS--VFSHLAWVQTD 163 (208)
Q Consensus 109 ~~vlL~f~~-~t~Cp~C~~~~~~l~~~~~~~~~--~gv~vi~Vs~d~--~~~~~~~~~~~ 163 (208)
+++||.||. ++||+ ..|.+.++.+++.+ .++.|.-|.+++ ........+++
T Consensus 34 ~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 34 PYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp SEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 478999985 68997 88999999999864 468888888776 22244556665
No 254
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.02 E-value=0.049 Score=36.31 Aligned_cols=32 Identities=6% Similarity=0.187 Sum_probs=23.4
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
|+.|+ .+|||.|+...+.|.+. |+.+..|.++
T Consensus 8 v~~y~-~~~C~~C~~~~~~L~~~-------~i~~~~vdv~ 39 (89)
T 2klx_A 8 IILYT-RPNCPYCKRARDLLDKK-------GVKYTDIDAS 39 (89)
T ss_dssp EEEES-CSCCTTTHHHHHHHHHH-------TCCEEEECSC
T ss_pred EEEEE-CCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 45565 89999999877666543 5677777777
No 255
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=95.00 E-value=0.022 Score=42.49 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=22.6
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
|++|+ .+|||+|+...+.|.++ |+.+..|.+|.
T Consensus 51 Vvvf~-~~~Cp~C~~~k~~L~~~-------~i~~~~vdId~ 83 (146)
T 2ht9_A 51 VVIFS-KTSCSYCTMAKKLFHDM-------NVNYKVVELDL 83 (146)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEEGGG
T ss_pred EEEEE-CCCChhHHHHHHHHHHc-------CCCeEEEECcc
Confidence 34477 89999999887777654 45555566653
No 256
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=94.97 E-value=0.006 Score=51.00 Aligned_cols=38 Identities=11% Similarity=0.152 Sum_probs=28.7
Q ss_pred eEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHH
Q 028461 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138 (208)
Q Consensus 99 ~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~ 138 (208)
...+.+..++ ..++.|| ++|||+|+...|.+.++.+++
T Consensus 189 ~~~la~~l~~-~~vV~F~-A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQ-IGGTMYG-AYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHH-TTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCC-CCEEEEE-CCCCHHHHHHHHHHHHHHHHc
Confidence 4556555444 3578898 999999999999998876554
No 257
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=94.86 E-value=0.027 Score=40.26 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=22.4
Q ss_pred EEEEEcCCCCCCChhh-HHHHHHHHHHHhhCC---eEEEEEeCCC
Q 028461 112 ILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLN---TEILGVSTDS 152 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~-~~~l~~~~~~~~~~g---v~vi~Vs~d~ 152 (208)
|++|+ .+|||+|+.. .+.| ++.| +.+..|.+|.
T Consensus 27 Vvvf~-~~~Cp~C~~alk~~L-------~~~~~~~i~~~~vdid~ 63 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHAALNTLF-------EKLKVPRSKVLVLQLND 63 (118)
T ss_dssp EEEEE-CSSCHHHHHHHHHHH-------TTSCCCGGGEEEEEGGG
T ss_pred EEEEE-cCCCcCHHHHHHHHH-------HHcCCCCCCeEEEECcc
Confidence 55566 8999999976 3333 3345 7777777764
No 258
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.83 E-value=0.024 Score=39.98 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=23.7
Q ss_pred EEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeE---EEEEeCCC
Q 028461 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTE---ILGVSTDS 152 (208)
Q Consensus 111 vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~---vi~Vs~d~ 152 (208)
.|++|+ .+|||+|+...+.|. +.|++ +..|.+|.
T Consensus 20 ~vv~f~-~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~~ 56 (114)
T 2hze_A 20 KVTIFV-KYTCPFCRNALDILN-------KFSFKRGAYEIVDIKE 56 (114)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGGG
T ss_pred CEEEEE-eCCChhHHHHHHHHH-------HcCCCcCceEEEEccC
Confidence 466677 899999997766654 34556 76777754
No 259
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.82 E-value=0.048 Score=37.71 Aligned_cols=44 Identities=9% Similarity=0.066 Sum_probs=29.3
Q ss_pred EEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHH
Q 028461 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162 (208)
Q Consensus 111 vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~ 162 (208)
-|++|+ .+|||.|......|.++ |+.+..|.++......+++++
T Consensus 17 ~v~vy~-~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~~~~~~~l~~ 60 (99)
T 3qmx_A 17 KIEIYT-WSTCPFCMRALALLKRK-------GVEFQEYCIDGDNEAREAMAA 60 (99)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEECTTCHHHHHHHHH
T ss_pred CEEEEE-cCCChhHHHHHHHHHHC-------CCCCEEEEcCCCHHHHHHHHH
Confidence 355565 89999999888777653 566666777654444444443
No 260
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.08 E-value=0.082 Score=34.22 Aligned_cols=54 Identities=11% Similarity=0.135 Sum_probs=31.8
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh-hhHHHHHHHhhhcCCCCCCcceEEEc
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV-FSHLAWVQTDRKSGGLGDLKYPLIAD 179 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~-~~~~~~~~~~~~~~~~~~~~f~~l~D 179 (208)
|+.|+ ..|||.|+...+.|.+. |+.+.-|.++.. ....++.+.. +. ..+|.+..
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~~~~----~~--~~vP~l~~ 57 (82)
T 1fov_A 3 VEIYT-KETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMIKRS----GR--TTVPQIFI 57 (82)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHHHHH----SS--CCSCEEEE
T ss_pred EEEEE-CCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHHHHh----CC--CCcCEEEE
Confidence 44455 78999999877666542 566666777643 3333344444 33 34565544
No 261
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.68 E-value=0.021 Score=44.11 Aligned_cols=40 Identities=5% Similarity=0.079 Sum_probs=30.9
Q ss_pred EEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCC
Q 028461 110 YVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d 151 (208)
++|+.|+ ..|||+|....+.+ .++.+++.+ +++++-+.++
T Consensus 16 ~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 16 PAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp CSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 7888998 89999999988886 456665654 6888777664
No 262
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=93.35 E-value=0.07 Score=38.76 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=20.8
Q ss_pred EEEEEcCCCCCCChhh-HHHHHHHHHHHhhCC---eEEEEEeCCC
Q 028461 112 ILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLN---TEILGVSTDS 152 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~-~~~l~~~~~~~~~~g---v~vi~Vs~d~ 152 (208)
|++|+ .+|||+|... .+.|. +.| +.+..|.+|.
T Consensus 39 Vvvy~-~~~Cp~C~~a~k~~L~-------~~~~~~i~~~~vdvd~ 75 (129)
T 3ctg_A 39 VFVAA-KTYCPYCKATLSTLFQ-------ELNVPKSKALVLELDE 75 (129)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHT-------TSCCCGGGEEEEEGGG
T ss_pred EEEEE-CCCCCchHHHHHHHHH-------hcCccCCCcEEEEccc
Confidence 45566 7999999977 44443 334 6566666653
No 263
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=93.11 E-value=0.11 Score=34.57 Aligned_cols=44 Identities=5% Similarity=0.045 Sum_probs=27.5
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHH-HHHHHh
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL-AWVQTD 163 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~-~~~~~~ 163 (208)
|+.|+ ..|||.|+...+.|.+ .|+++..+.++...... .+.+..
T Consensus 8 v~ly~-~~~C~~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~l~~~~ 52 (92)
T 2khp_A 8 VIIYT-RPGCPYCARAKALLAR-------KGAEFNEIDASATPELRAEMQERS 52 (92)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEESTTSHHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHHHh
Confidence 45565 7999999976665543 46777777877533333 343333
No 264
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=92.84 E-value=0.16 Score=35.03 Aligned_cols=27 Identities=4% Similarity=-0.141 Sum_probs=20.0
Q ss_pred CCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 119 DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 119 t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
+|||+|....+.|.++ |+.+.-|.++.
T Consensus 30 ~~C~~C~~~~~~L~~~-------~i~~~~vdi~~ 56 (105)
T 2yan_A 30 AKCGFSKQILEILNST-------GVEYETFDILE 56 (105)
T ss_dssp BCTTHHHHHHHHHHHH-------TCCCEEEEGGG
T ss_pred CCCccHHHHHHHHHHC-------CCCeEEEECCC
Confidence 8999999877776553 56777777764
No 265
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=92.83 E-value=0.04 Score=42.43 Aligned_cols=39 Identities=13% Similarity=-0.044 Sum_probs=30.8
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
++ ++|+.|+ .-|||+|....|.+.++.+++ ++.+.-+.+
T Consensus 22 ~~-~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~ 60 (185)
T 3feu_A 22 GM-APVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMHI 60 (185)
T ss_dssp CC-CSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEEC
T ss_pred CC-CEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEec
Confidence 44 7888888 788999999989999988888 455555554
No 266
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=92.76 E-value=0.13 Score=41.18 Aligned_cols=51 Identities=10% Similarity=-0.048 Sum_probs=35.7
Q ss_pred cEEEEEEEcCCC--CCCChhhHHHHHHHHHHHhh-CC---eEEEEEeCCChhhHHHHHHHh
Q 028461 109 KYVILFFYPLDF--TFVCPTEITAFSDRYTEFEK-LN---TEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 109 ~~vlL~f~~~t~--Cp~C~~~~~~l~~~~~~~~~-~g---v~vi~Vs~d~~~~~~~~~~~~ 163 (208)
++++|.|| +.| |+.|....+.+.++.+++.+ +| +.|+-|..|+ .....+++
T Consensus 26 ~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~---~~~~~~~~ 82 (243)
T 2hls_A 26 NPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES---DSDKFSEF 82 (243)
T ss_dssp SCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTT---THHHHHHT
T ss_pred CCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCc---CHHHHHhc
Confidence 37888888 888 99999999999998877531 22 6666666654 23344554
No 267
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=92.72 E-value=0.077 Score=37.10 Aligned_cols=43 Identities=16% Similarity=0.181 Sum_probs=26.3
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC----hhhHHHHHHH
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS----VFSHLAWVQT 162 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~----~~~~~~~~~~ 162 (208)
|++|+ .+|||+|....+.|.+ .|+.+-.|.+|. .....+++++
T Consensus 21 v~vy~-~~~Cp~C~~~~~~L~~-------~~i~~~~~di~~~~~~~~~~~~~l~~ 67 (113)
T 3rhb_A 21 VVIYS-KTWCSYCTEVKTLFKR-------LGVQPLVVELDQLGPQGPQLQKVLER 67 (113)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEEGGGSTTHHHHHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCCeEEEeecCCCChHHHHHHHHH
Confidence 45566 7999999977766654 355555555543 2344455544
No 268
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=92.62 E-value=0.1 Score=36.74 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=21.9
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
|+.|+ .+|||.|......|.+ .|+.+-.+.+|.
T Consensus 19 v~vy~-~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd~ 51 (114)
T 3h8q_A 19 VVIFS-KSYCPHSTRVKELFSS-------LGVECNVLELDQ 51 (114)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEE-cCCCCcHHHHHHHHHH-------cCCCcEEEEecC
Confidence 33465 7999999877666654 356655666663
No 269
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=92.62 E-value=0.1 Score=36.41 Aligned_cols=36 Identities=11% Similarity=-0.049 Sum_probs=25.0
Q ss_pred EEEEEEEcC----CCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCCh
Q 028461 110 YVILFFYPL----DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 110 ~vlL~f~~~----t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
.++|+.. + .|||.|......|.+ .|+.+..|.++..
T Consensus 16 ~vvvy~~-g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vdi~~~ 55 (109)
T 1wik_A 16 SVMLFMK-GNKQEAKCGFSKQILEILNS-------TGVEYETFDILED 55 (109)
T ss_dssp SEEEEES-STTTCCCSSTHHHHHHHHHH-------TCSCEEEEESSSC
T ss_pred CEEEEEe-cCCCCCCCchHHHHHHHHHH-------cCCCeEEEECCCC
Confidence 4555543 4 899999977766643 3777777888653
No 270
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=91.88 E-value=0.18 Score=33.59 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=20.6
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
|..|+ ..|||.|+.....|.++ |+++-.+.++
T Consensus 14 v~ly~-~~~Cp~C~~~~~~L~~~-------gi~~~~~~v~ 45 (92)
T 3ic4_A 14 VLMYG-LSTCPHCKRTLEFLKRE-------GVDFEVIWID 45 (92)
T ss_dssp SEEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred EEEEE-CCCChHHHHHHHHHHHc-------CCCcEEEEee
Confidence 44455 79999999877666543 4444445554
No 271
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=89.82 E-value=0.66 Score=30.13 Aligned_cols=20 Identities=10% Similarity=0.041 Sum_probs=14.3
Q ss_pred EEEEEcCCCCCCChhhHHHHH
Q 028461 112 ILFFYPLDFTFVCPTEITAFS 132 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~ 132 (208)
|+.|+ ..|||.|+.....|.
T Consensus 6 v~ly~-~~~Cp~C~~~~~~L~ 25 (89)
T 3msz_A 6 VKIYT-RNGCPYCVWAKQWFE 25 (89)
T ss_dssp EEEEE-CTTCHHHHHHHHHHH
T ss_pred EEEEE-cCCChhHHHHHHHHH
Confidence 44555 789999988665554
No 272
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=89.70 E-value=0.38 Score=35.85 Aligned_cols=41 Identities=10% Similarity=0.086 Sum_probs=30.2
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
++ ++|+.|+... ||+|....+.+.++.+++.+ ++.++-+.+
T Consensus 21 ~~-~~vvEf~dy~-Cp~C~~~~~~~~~l~~~~~~-~~~~~~~~~ 61 (184)
T 4dvc_A 21 SS-PVVSEFFSFY-CPHCNTFEPIIAQLKQQLPE-GAKFQKNHV 61 (184)
T ss_dssp SS-CEEEEEECTT-CHHHHHHHHHHHHHHHTSCT-TCEEEEEEC
T ss_pred CC-CEEEEEECCC-CHhHHHHhHHHHHHHhhcCC-ceEEEEEec
Confidence 44 6777777455 99999988999998888876 456655544
No 273
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=88.65 E-value=0.5 Score=35.64 Aligned_cols=42 Identities=5% Similarity=-0.038 Sum_probs=32.2
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHH-HHHHHHHhhCCeEEEEEeCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAF-SDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l-~~~~~~~~~~gv~vi~Vs~d 151 (208)
++ ++++.|| .-.||.|....+.+ .++.+++.+ .+++..+.++
T Consensus 17 ~~-~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l~ 59 (195)
T 3c7m_A 17 AD-KTLIKVF-SYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHLE 59 (195)
T ss_dssp CT-TEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEECT
T ss_pred CC-cEEEEEE-eCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEecC
Confidence 44 5788888 48899999988888 888777764 4777777654
No 274
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=88.37 E-value=2.2 Score=33.28 Aligned_cols=51 Identities=6% Similarity=-0.063 Sum_probs=36.8
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
.+++.|. ..||+.|...++.+.++.++|+++ +.++.|..++.. ...+++..
T Consensus 133 ~~~l~f~-~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~-~~~~l~~f 183 (227)
T 4f9z_D 133 IHLLLIM-NKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKE-NGKVISFF 183 (227)
T ss_dssp EEEEEEE-CTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGG-GHHHHHHT
T ss_pred eEEEEEE-cCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHh-HHHHHHHc
Confidence 4556665 567999999999999999999875 777777766422 33456655
No 275
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=88.35 E-value=0.25 Score=38.11 Aligned_cols=42 Identities=12% Similarity=0.182 Sum_probs=31.1
Q ss_pred CCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCC
Q 028461 107 GKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 107 gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d 151 (208)
++ ++|+.|+ .-+||+|....+.+ .++.+++.+ +++++-+.+.
T Consensus 21 ~~-~~vvef~-d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GE-PQVLEFF-SFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHVE 65 (191)
T ss_dssp SS-SCEEEEE-CTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEECS
T ss_pred CC-CeEEEEE-CCCChhHHHhChhccchHHHHHhCCC-CcEEEEEecc
Confidence 44 6777777 67799999988886 577777765 5777766553
No 276
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=88.00 E-value=1.1 Score=29.43 Aligned_cols=30 Identities=7% Similarity=-0.052 Sum_probs=20.4
Q ss_pred EEEcCC----CCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 114 FFYPLD----FTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 114 ~f~~~t----~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
.|+ .+ |||.|......|.+ .|+.+-.+.++
T Consensus 4 iY~-~~~~~~~Cp~C~~ak~~L~~-------~gi~y~~idI~ 37 (87)
T 1aba_A 4 VYG-YDSNIHKCGPCDNAKRLLTV-------KKQPFEFINIM 37 (87)
T ss_dssp EEE-CCTTTSCCHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred EEE-eCCCCCcCccHHHHHHHHHH-------cCCCEEEEEee
Confidence 344 78 99999876555543 46776677776
No 277
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=85.98 E-value=0.83 Score=33.02 Aligned_cols=60 Identities=7% Similarity=-0.036 Sum_probs=39.4
Q ss_pred cCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC----hhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 117 PLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS----VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 117 ~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~----~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
...+||.|+.....|.+ .|+.+-.+.++. .+..++|.+.. +.++.-+.+..+...+.++.
T Consensus 7 ~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~~~-------~~~~~~l~n~~~~~~k~l~~ 70 (132)
T 1z3e_A 7 TSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILRMT-------EDGTDEIISTRSKVFQKLNV 70 (132)
T ss_dssp ECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHTC-------SSCGGGTBCTTSHHHHHHCC
T ss_pred eCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHHHc-------CCCHHHhhcCCchHHHhcCc
Confidence 37889999977666553 477766666642 25566666644 44566666667777777775
No 278
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=85.23 E-value=0.98 Score=32.21 Aligned_cols=63 Identities=13% Similarity=0.251 Sum_probs=44.1
Q ss_pred EEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC--C--ChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhC
Q 028461 114 FFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST--D--SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (208)
Q Consensus 114 ~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~--d--~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~g 189 (208)
.+|...+|+.|+....-|.+ +|+++-.+.+ + +.+....|.+.. +.++.-+.+..+...+.++
T Consensus 6 ~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~-------g~~~~~l~n~~~~~~k~l~ 71 (120)
T 3fz4_A 6 TFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIKKNPPAASLIRNWLENS-------GLELKKFFNTSGQSYRALG 71 (120)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------HTCCEEEEETTTSCCCHHHHHHHHHHS-------CCCGGGGBCTTSHHHHHTT
T ss_pred EEEeCCCChHHHHHHHHHHH-------cCCceEEEEeccCchhHHHHHHHHHHc-------CCCHHHHhCCCCcchhhcC
Confidence 34447889999987766653 3666666655 3 346778888877 5567767777888888887
Q ss_pred C
Q 028461 190 V 190 (208)
Q Consensus 190 V 190 (208)
+
T Consensus 72 l 72 (120)
T 3fz4_A 72 L 72 (120)
T ss_dssp H
T ss_pred c
Confidence 6
No 279
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=85.04 E-value=1.9 Score=30.59 Aligned_cols=45 Identities=9% Similarity=-0.017 Sum_probs=27.2
Q ss_pred EEEEEEEcCC----CCCCChhhHHHHHHHHHHHhhCCeE---EEEEeCCChhhHHHHHHH
Q 028461 110 YVILFFYPLD----FTFVCPTEITAFSDRYTEFEKLNTE---ILGVSTDSVFSHLAWVQT 162 (208)
Q Consensus 110 ~vlL~f~~~t----~Cp~C~~~~~~l~~~~~~~~~~gv~---vi~Vs~d~~~~~~~~~~~ 162 (208)
.++|+.- ++ |||+|......|.++ |+. +.-+.++.....++.+++
T Consensus 17 ~Vvvfsk-~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~~~~~~~l~~ 68 (121)
T 3gx8_A 17 PVVLFMK-GTPEFPKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLEDPELREGIKE 68 (121)
T ss_dssp SEEEEES-BCSSSBCTTHHHHHHHHHHHH-------TBCGGGEEEEECTTCHHHHHHHHH
T ss_pred CEEEEEe-ccCCCCCCccHHHHHHHHHHc-------CCCcceEEEEEecCCHHHHHHHHH
Confidence 4555554 43 999999877766553 555 555666544445454544
No 280
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=84.84 E-value=0.81 Score=32.58 Aligned_cols=63 Identities=6% Similarity=-0.045 Sum_probs=43.3
Q ss_pred EEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC----ChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 115 FYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 115 f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
+|...+|+.|+....-|. ++|+++-.+.+. +.+...+|.+.. +.++.-+.+..+...+.+++
T Consensus 4 iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~el~~~l~~~-------~~~~~~l~n~~~~~~k~l~~ 69 (120)
T 3l78_A 4 LFLSPSCTSCRKARAWLN-------RHDVVFQEHNIMTSPLSRDELLKILSYT-------ENGTEDIISTRSKVFQKLDI 69 (120)
T ss_dssp EEECSSCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHHC-------SSTHHHHBCTTCHHHHHTTC
T ss_pred EEeCCCCHHHHHHHHHHH-------HcCCCeEEEecccCCCcHHHHHHHHhhc-------CCCHHHhhcCCcHHHHHcCC
Confidence 444788999998766664 457777666663 346677787765 55666666677888888776
Q ss_pred c
Q 028461 191 L 191 (208)
Q Consensus 191 ~ 191 (208)
.
T Consensus 70 ~ 70 (120)
T 3l78_A 70 D 70 (120)
T ss_dssp C
T ss_pred C
Confidence 3
No 281
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=84.21 E-value=2.3 Score=28.25 Aligned_cols=42 Identities=7% Similarity=-0.102 Sum_probs=23.0
Q ss_pred CCCCCCCh--hhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHH
Q 028461 118 LDFTFVCP--TEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162 (208)
Q Consensus 118 ~t~Cp~C~--~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~ 162 (208)
.++||.|. ..-....++ +++.|+.+.-|.++.....++++++
T Consensus 9 ~~~C~~c~~~~~~~~ak~~---L~~~~i~~~~~di~~~~~~~~~l~~ 52 (93)
T 1t1v_A 9 TSVTGSREIKSQQSEVTRI---LDGKRIQYQLVDISQDNALRDEMRT 52 (93)
T ss_dssp CSSCSCHHHHHHHHHHHHH---HHHTTCCCEEEETTSCHHHHHHHHH
T ss_pred cCCCCCchhhHHHHHHHHH---HHHCCCceEEEECCCCHHHHHHHHH
Confidence 68999994 111112222 3345777777777654444444443
No 282
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=84.02 E-value=0.62 Score=33.68 Aligned_cols=21 Identities=10% Similarity=0.036 Sum_probs=15.1
Q ss_pred EEEEEcCCCCCCChhhHHHHHH
Q 028461 112 ILFFYPLDFTFVCPTEITAFSD 133 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~ 133 (208)
|+.|. .+|||.|......|.+
T Consensus 16 Vvvys-k~~Cp~C~~ak~lL~~ 36 (127)
T 3l4n_A 16 IIIFS-KSTCSYSKGMKELLEN 36 (127)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH
T ss_pred EEEEE-cCCCccHHHHHHHHHH
Confidence 44444 6999999987766665
No 283
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=82.32 E-value=0.88 Score=32.48 Aligned_cols=62 Identities=16% Similarity=0.166 Sum_probs=43.6
Q ss_pred EEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC--C--ChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 115 FYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST--D--SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 115 f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~--d--~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
+|...+|+.|+....-|. ++|+++-.+.+ + +.+...+|.+.. +.++.-+.+..+...+.+|+
T Consensus 8 iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~-------g~~~~~l~n~~~~~~k~l~l 73 (120)
T 3gkx_A 8 FLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVDDNPTVEELKAWIPLS-------GLPVKKFFNTSGVVYKELKL 73 (120)
T ss_dssp EEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTTCCCHHHHHHHHHHH-------TSCGGGGBCTTSHHHHHTTH
T ss_pred EEECCCChHHHHHHHHHH-------HcCCceEEEecccCcCCHHHHHHHHHHc-------CCCHHHeEeCCCchhhhcCc
Confidence 444788999998776664 34666655655 3 356778898887 56677677777888888775
No 284
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=82.13 E-value=1.1 Score=31.37 Aligned_cols=48 Identities=8% Similarity=-0.081 Sum_probs=27.9
Q ss_pred ccCCcEEEEEEEcC-----CCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHH
Q 028461 105 YIGKKYVILFFYPL-----DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQ 161 (208)
Q Consensus 105 ~~gk~~vlL~f~~~-----t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~ 161 (208)
...++.++|+. - +|||.|......|.+ .|+.+..+.++.....++.++
T Consensus 12 ~i~~~~Vvlf~--kg~~~~~~Cp~C~~ak~~L~~-------~gi~y~~~di~~d~~~~~~l~ 64 (111)
T 3zyw_A 12 LTHAAPCMLFM--KGTPQEPRCGFSKQMVEILHK-------HNIQFSSFDIFSDEEVRQGLK 64 (111)
T ss_dssp HHTSSSEEEEE--SBCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHH
T ss_pred HHhcCCEEEEE--ecCCCCCcchhHHHHHHHHHH-------cCCCeEEEECcCCHHHHHHHH
Confidence 33333455554 4 899999987766653 366666666654333333333
No 285
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=81.63 E-value=1.3 Score=30.62 Aligned_cols=45 Identities=16% Similarity=0.045 Sum_probs=27.0
Q ss_pred EEEEEEEcCC----CCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHH
Q 028461 110 YVILFFYPLD----FTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162 (208)
Q Consensus 110 ~vlL~f~~~t----~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~ 162 (208)
.++|+.- ++ |||.|......|.+ .|+.+-.+.++......+++++
T Consensus 19 ~Vvvy~k-~t~~~p~Cp~C~~ak~~L~~-------~gi~~~~~dI~~~~~~~~~l~~ 67 (109)
T 3ipz_A 19 KVVLFMK-GTRDFPMCGFSNTVVQILKN-------LNVPFEDVNILENEMLRQGLKE 67 (109)
T ss_dssp SEEEEES-BCSSSBSSHHHHHHHHHHHH-------TTCCCEEEEGGGCHHHHHHHHH
T ss_pred CEEEEEe-cCCCCCCChhHHHHHHHHHH-------cCCCcEEEECCCCHHHHHHHHH
Confidence 4555543 42 89999987666654 3666666776543344444444
No 286
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=81.44 E-value=1.5 Score=31.14 Aligned_cols=46 Identities=4% Similarity=-0.152 Sum_probs=27.0
Q ss_pred EEEEEEEcC----CCCCCChhhHHHHHHHHHHHhhCCeE-EEEEeCCChhhHHHHHHHh
Q 028461 110 YVILFFYPL----DFTFVCPTEITAFSDRYTEFEKLNTE-ILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 110 ~vlL~f~~~----t~Cp~C~~~~~~l~~~~~~~~~~gv~-vi~Vs~d~~~~~~~~~~~~ 163 (208)
.++|+.- . .|||.|......|.+ .|+. +..+.++.....++.+++.
T Consensus 21 ~Vvvfsk-~t~~~p~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~d~~~~~~l~~~ 71 (118)
T 2wem_A 21 KVVVFLK-GTPEQPQCGFSNAVVQILRL-------HGVRDYAAYNVLDDPELRQGIKDY 71 (118)
T ss_dssp SEEEEES-BCSSSBSSHHHHHHHHHHHH-------TTCCCCEEEESSSCHHHHHHHHHH
T ss_pred CEEEEEe-cCCCCCccHHHHHHHHHHHH-------cCCCCCEEEEcCCCHHHHHHHHHH
Confidence 4555543 4 289999876666553 3663 6666766544444444443
No 287
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=81.36 E-value=1 Score=33.31 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=27.4
Q ss_pred EecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEE
Q 028461 100 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV 148 (208)
Q Consensus 100 v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~V 148 (208)
+.+..-.++ .+|+.|. -.+||+|+...+.+.++ . ++.|+.+
T Consensus 7 i~~~~~~a~-~~vv~f~-D~~Cp~C~~~~~~l~~l----~--~v~v~~~ 47 (147)
T 3gv1_A 7 IKEVRGNGK-LKVAVFS-DPDCPFCKRLEHEFEKM----T--DVTVYSF 47 (147)
T ss_dssp EEEEETTCC-EEEEEEE-CTTCHHHHHHHHHHTTC----C--SEEEEEE
T ss_pred eeeecCCCC-EEEEEEE-CCCChhHHHHHHHHhhc----C--ceEEEEE
Confidence 333333455 6788887 77899999988887543 2 4666654
No 288
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=81.35 E-value=0.93 Score=33.09 Aligned_cols=35 Identities=9% Similarity=0.012 Sum_probs=23.4
Q ss_pred EEEEEEEcC----CCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 110 YVILFFYPL----DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 110 ~vlL~f~~~----t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
.++|+.+ + .|||.|......|. +.|+.+..|.++.
T Consensus 36 ~Vvvy~k-s~~~~~~Cp~C~~ak~~L~-------~~gv~y~~vdI~~ 74 (135)
T 2wci_A 36 PILLYMK-GSPKLPSCGFSAQAVQALA-------ACGERFAYVDILQ 74 (135)
T ss_dssp SEEEEES-BCSSSBSSHHHHHHHHHHH-------TTCSCCEEEEGGG
T ss_pred CEEEEEE-ecCCCCCCccHHHHHHHHH-------HcCCceEEEECCC
Confidence 4666554 4 69999997666554 3477777777753
No 289
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.27 E-value=2.8 Score=29.09 Aligned_cols=42 Identities=10% Similarity=0.009 Sum_probs=23.8
Q ss_pred CCCCCCChh--hHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHH
Q 028461 118 LDFTFVCPT--EITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162 (208)
Q Consensus 118 ~t~Cp~C~~--~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~ 162 (208)
.++||.|.. .-....++ +++.|+.+..|.++.....++++.+
T Consensus 15 ~~~C~~C~~~~~~~~ak~~---L~~~gi~y~~vdI~~~~~~~~~l~~ 58 (111)
T 2ct6_A 15 ASSSGFVAIKKKQQDVVRF---LEANKIEFEEVDITMSEEQRQWMYK 58 (111)
T ss_dssp CSSCSCHHHHHHHHHHHHH---HHHTTCCEEEEETTTCHHHHHHHHH
T ss_pred cCCCCCcccchhHHHHHHH---HHHcCCCEEEEECCCCHHHHHHHHH
Confidence 689999983 11122222 3345788888888654444444443
No 290
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=80.22 E-value=1.4 Score=36.17 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=29.4
Q ss_pred cCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 106 ~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
.|+ .+|.+|+ -..||+|+...+.+.+..+ +-.+.++.+.+-
T Consensus 146 ~gk-~~I~vFt-Dp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pil 186 (273)
T 3tdg_A 146 NKD-KILYIVS-DPMCPHCQKELTKLRDHLK---ENTVRMVVVGWL 186 (273)
T ss_dssp GTT-CEEEEEE-CTTCHHHHHHHHTHHHHHH---HCEEEEEECCCS
T ss_pred CCC-eEEEEEE-CcCChhHHHHHHHHHHHhh---CCcEEEEEeecc
Confidence 355 7888888 5669999999999987654 345666666543
No 291
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=80.19 E-value=1.6 Score=33.26 Aligned_cols=40 Identities=8% Similarity=-0.084 Sum_probs=28.4
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
.+|+.|. --.||.|....+.+.++.+++....++++.-..
T Consensus 16 vtiv~f~-D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 16 RLFEVFL-EPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp EEEEEEE-CTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred EEEEEEE-CCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 5666666 444999999888888877776333588776643
No 292
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=78.86 E-value=4.5 Score=31.36 Aligned_cols=49 Identities=10% Similarity=-0.047 Sum_probs=32.4
Q ss_pred EecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHH-HHh-hCCeEEEEEeC
Q 028461 100 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYT-EFE-KLNTEILGVST 150 (208)
Q Consensus 100 v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~-~~~-~~gv~vi~Vs~ 150 (208)
..+.+-.++ .+|+.|.-.. ||.|....+.+....+ +|- +..++++....
T Consensus 8 ~~~G~~~a~-vtivef~D~~-Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 8 HLLGNPAAK-LRLVEFVSYT-CPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EEESCTTCS-EEEEEEECTT-CHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred ceecCCCCC-eEEEEEECCC-CHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 444454555 6788887444 9999988887766555 673 34577776554
No 293
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=76.92 E-value=1.6 Score=32.06 Aligned_cols=63 Identities=8% Similarity=-0.055 Sum_probs=42.7
Q ss_pred EEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC----ChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 115 FYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 115 f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
+|...+|+.|+....-|. ++|+++-.+.+. +.+...+|.+.. +.+..-+.+..+...+.+++
T Consensus 6 iY~~p~C~~crkak~~L~-------~~gi~~~~idi~~~~~~~~eL~~~~~~~-------g~p~~~l~n~~~~~yk~l~l 71 (141)
T 1s3c_A 6 IYHNPASGTSRNTLEMIR-------NSGTEPTIILYLENPPSRDELVKLIADM-------GISVRALLRKNVEPYEQLGL 71 (141)
T ss_dssp EECCTTCHHHHHHHHHHH-------HTTCCCEEECTTTSCCCHHHHHHHHHHH-------TSCHHHHBCSSSHHHHHTTT
T ss_pred EEECCCChHHHHHHHHHH-------HcCCCEEEEECCCCCccHHHHHHHhccc-------CCCHHHhccCCchhHHhcCC
Confidence 444788999997766554 357776666653 245667788776 55555556677888888876
Q ss_pred c
Q 028461 191 L 191 (208)
Q Consensus 191 ~ 191 (208)
.
T Consensus 72 ~ 72 (141)
T 1s3c_A 72 A 72 (141)
T ss_dssp T
T ss_pred c
Confidence 4
No 294
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=76.38 E-value=4.2 Score=29.13 Aligned_cols=44 Identities=5% Similarity=-0.055 Sum_probs=26.2
Q ss_pred cCCCCCCChh--hHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 117 PLDFTFVCPT--EITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 117 ~~t~Cp~C~~--~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
..+.||.|.. .-...+.+ ++.+|+.+--|.++.....++|+.+.
T Consensus 6 tt~~c~~c~~kk~c~~aK~l---L~~kgV~feEidI~~d~~~r~eM~~~ 51 (121)
T 1u6t_A 6 IASSSGSTAIKKKQQDVLGF---LEANKIGFEEKDIAANEENRKWMREN 51 (121)
T ss_dssp ECTTCSCHHHHHHHHHHHHH---HHHTTCCEEEEECTTCHHHHHHHHHH
T ss_pred ecCCCCCccchHHHHHHHHH---HHHCCCceEEEECCCCHHHHHHHHHh
Confidence 3688999951 11222222 45678888888887544555555543
No 295
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=74.59 E-value=1.7 Score=30.75 Aligned_cols=59 Identities=5% Similarity=-0.063 Sum_probs=37.8
Q ss_pred EcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-C---hhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 116 YPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-S---VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 116 ~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d-~---~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
|...+|+.|+.....|.+ .|+.+-.+.++ + .+..++|.+.. + +.-+.+..+...+.+|.
T Consensus 10 Y~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~-------g--~~~l~n~~~~~~k~l~~ 72 (120)
T 2kok_A 10 YGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTV-------P--WEQLLNRAGTTFRKLPE 72 (120)
T ss_dssp EECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHS-------C--GGGTBCSSSHHHHHSCH
T ss_pred EECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHc-------C--hHhhccCCchhhHhcCc
Confidence 337889999977766654 36666666553 2 36667777765 2 33444556777777764
No 296
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=74.45 E-value=0.8 Score=24.26 Aligned_cols=20 Identities=5% Similarity=0.026 Sum_probs=17.1
Q ss_pred CCCChhhHHHHHHHHHHHhh
Q 028461 121 TFVCPTEITAFSDRYTEFEK 140 (208)
Q Consensus 121 Cp~C~~~~~~l~~~~~~~~~ 140 (208)
||.|..++|.++.+..-|++
T Consensus 6 CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 6 CPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CTTSSCEESSHHHHHHHHHH
T ss_pred CccccccCcChHHHHHHHHH
Confidence 99999999999888776664
No 297
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=74.07 E-value=1.4 Score=30.89 Aligned_cols=59 Identities=5% Similarity=-0.031 Sum_probs=36.8
Q ss_pred EcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC-C---hhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 116 YPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-S---VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 116 ~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d-~---~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
|...+||.|+.....|.+ +|+.+-.+.++ + .+..++|.+.. + +.-+.+..+...+.+|.
T Consensus 5 Y~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~~~-------g--~~~l~n~~~~~~k~l~~ 67 (114)
T 1rw1_A 5 YGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCAEH-------G--WQTVLNRAGTTFRKLDE 67 (114)
T ss_dssp EECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHHHH-------C--HHHHBCTTSHHHHTSCH
T ss_pred EECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHHhC-------C--hHHhccCCcHhHHhcCc
Confidence 347889999977666543 47776666663 2 26777788765 2 33334445666666554
No 298
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=73.35 E-value=4.1 Score=30.40 Aligned_cols=40 Identities=8% Similarity=-0.080 Sum_probs=27.9
Q ss_pred EEEEEEEcCCCCCCChhhHHHHH-HHHHHHhh-CCeEEEEEeC
Q 028461 110 YVILFFYPLDFTFVCPTEITAFS-DRYTEFEK-LNTEILGVST 150 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~-~~~~~~~~-~gv~vi~Vs~ 150 (208)
..|++|+ --.||.|....+.+. ++.++|.+ .+++|+...+
T Consensus 13 ~~i~~f~-D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 13 PLVVVYG-DYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp CEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred eEEEEEE-CCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 5677776 555999999988884 56667754 3477776543
No 299
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=73.22 E-value=2.3 Score=30.31 Aligned_cols=63 Identities=10% Similarity=-0.048 Sum_probs=42.3
Q ss_pred EEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC--C--ChhhHHHHHHHhhhcCCCCCC-cceEEEcCccHHHHHhC
Q 028461 115 FYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST--D--SVFSHLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYG 189 (208)
Q Consensus 115 f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~--d--~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~~~~v~~~~g 189 (208)
+|...+|+.|+....-|. ++|+.+-.+.+ + +.+.++.|.+.. +. +..-+.+..+...+.++
T Consensus 9 iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~-------g~~~~~~l~n~~~~~~k~l~ 74 (121)
T 3rdw_A 9 IYHNPRCSKSRETLALVE-------QQGITPQVVLYLETPPSVDKLKELLQQL-------GFSDARQLMRTKEDLYKTLN 74 (121)
T ss_dssp EECCTTCHHHHHHHHHHH-------TTTCCCEEECTTTSCCCHHHHHHHHHHT-------TCSSGGGGBCTTSHHHHHTT
T ss_pred EEECCCCHHHHHHHHHHH-------HcCCCcEEEeeccCCCcHHHHHHHHHhc-------CCcCHHHHhcCCChhhhhcC
Confidence 444778999998766554 45766666655 2 346778888876 44 44445666788888888
Q ss_pred Cc
Q 028461 190 VL 191 (208)
Q Consensus 190 V~ 191 (208)
+.
T Consensus 75 l~ 76 (121)
T 3rdw_A 75 LD 76 (121)
T ss_dssp TT
T ss_pred cc
Confidence 64
No 300
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=72.13 E-value=2.4 Score=30.05 Aligned_cols=65 Identities=9% Similarity=-0.055 Sum_probs=43.8
Q ss_pred EEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC----CChhhHHHHHHHhhhcCCCCCCc-ceEEEcCccHHHHHh
Q 028461 114 FFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST----DSVFSHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSY 188 (208)
Q Consensus 114 ~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~----d~~~~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~v~~~~ 188 (208)
.+|....|+.|+....-|.+ +|+++-.+.+ -+.+..+.|.+.. +.+ ..-+.+..+...+.+
T Consensus 7 ~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~t~~eL~~~l~~~-------g~~~~~~l~n~~~~~~k~l 72 (119)
T 3f0i_A 7 VIYHNPKCSKSRETLALLEN-------QGIAPQVIKYLETSPSVEELKRLYQQL-------GLNEVRAMMRCKEELYKEL 72 (119)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECHHHHCCCHHHHHHHHHHH-------TCSSGGGGBCTTSHHHHHT
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCceEEEEeccCcCcHHHHHHHHHHc-------CCccHHHHhcCCCchhhhc
Confidence 34446789999987766653 4665555543 3457788899887 444 545666778888888
Q ss_pred CCcc
Q 028461 189 GVLI 192 (208)
Q Consensus 189 gV~~ 192 (208)
++..
T Consensus 73 ~l~~ 76 (119)
T 3f0i_A 73 NLGD 76 (119)
T ss_dssp TTTC
T ss_pred Cccc
Confidence 7643
No 301
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.05 E-value=9.1 Score=29.05 Aligned_cols=69 Identities=9% Similarity=-0.004 Sum_probs=40.6
Q ss_pred CCCCCCeEEeeecCCCCceEecc----cccCCcEEEEEEEcCCCCCCChhhHHHH---HHHHHHHhhCCeEEEEEeCCCh
Q 028461 81 GNTAPDFAAEAVFDQEFINVKLS----DYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSV 153 (208)
Q Consensus 81 G~~~P~f~l~~~~~~~g~~v~Ls----d~~gk~~vlL~f~~~t~Cp~C~~~~~~l---~~~~~~~~~~gv~vi~Vs~d~~ 153 (208)
|...|.|--- .-.+-++.+ .-.+| +++|++. .+||+.|..-.... .++.+-++ .++.+.+.++++.
T Consensus 29 g~~~p~F~~g----s~~~Al~~A~~~~k~e~K-~LlVyLh-s~~~~~~~~f~~~~L~~~~V~~~l~-~nfV~w~~dv~~~ 101 (178)
T 2ec4_A 29 GDCHPVFFIG----SLEAAFQEAFYVKARDRK-LLAIYLH-HDESVLTNVFCSQMLCAESIVSYLS-QNFITWAWDLTKD 101 (178)
T ss_dssp CSCCCCCCCS----CHHHHHHTTTSSCTTTCC-EEEEEEE-CSSCSHHHHHHHHTTTCHHHHHHHH-HTEEEEEEECCSH
T ss_pred CCCCCCeeeC----CHHHHHHHHHhhhhhhCc-EEEEEEe-CCCCccHHHHHHHhcCCHHHHHHHH-cCEEEEEEeCCCc
Confidence 5666877532 211223444 33455 8899998 89999876443221 11222233 3788889999887
Q ss_pred hhH
Q 028461 154 FSH 156 (208)
Q Consensus 154 ~~~ 156 (208)
+..
T Consensus 102 e~~ 104 (178)
T 2ec4_A 102 SNR 104 (178)
T ss_dssp HHH
T ss_pred hhh
Confidence 643
No 302
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=71.75 E-value=15 Score=30.00 Aligned_cols=38 Identities=18% Similarity=0.130 Sum_probs=25.2
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
..|..|. ..+||.|......|.++..+ .|+..+.+.++
T Consensus 44 ~~VelyT-s~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFT-SQGCASCPPADEALRKMIQK---GDVVGLSYHVD 81 (270)
T ss_dssp CEEEEEE-CTTCTTCHHHHHHHHHHHHH---TSSEEEEEECS
T ss_pred cEEEEEe-CCCCCChHHHHHHHHHhhcc---CCeeeEEEEEE
Confidence 3444555 89999999888888777654 35544455543
No 303
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=68.20 E-value=10 Score=34.67 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=28.4
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccC--CcEEEEEEE
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIG--KKYVILFFY 116 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~g--k~~vlL~f~ 116 (208)
+.+|..+|++.+.. ..+|+.+.|.|+.+ .++.||.|-
T Consensus 479 ~~~G~r~p~~~~~~--~~~g~~~~l~~~l~~~g~~~ll~~~ 517 (665)
T 1pn0_A 479 CVVGTRFKSQPVVR--HSEGLWMHFGDRLVTDGRFRIIVFA 517 (665)
T ss_dssp SCTTSBCCCCEEEE--TTTTEEEEGGGGCCCSSCEEEEEEE
T ss_pred CCCcCCCCCCeEEe--cCCCcEEEHhHhhccCCCEEEEEec
Confidence 67999999999862 35788999988542 248888885
No 304
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=65.54 E-value=6.1 Score=30.82 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=21.4
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCC
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~ 152 (208)
|..|. ..|||.|......|.+ +|+.+-.+.++.
T Consensus 172 i~ly~-~~~Cp~C~~a~~~L~~-------~~i~~~~~~i~~ 204 (241)
T 1nm3_A 172 ISIFT-KPGCPFCAKAKQLLHD-------KGLSFEEIILGH 204 (241)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHH-------HTCCCEEEETTT
T ss_pred EEEEE-CCCChHHHHHHHHHHH-------cCCceEEEECCC
Confidence 44444 7899999977666653 356655566654
No 305
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=64.69 E-value=16 Score=25.80 Aligned_cols=51 Identities=16% Similarity=0.083 Sum_probs=35.0
Q ss_pred ccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 105 YIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 105 ~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
|+|. ++||++-.-. -. ..+..+.+.+.+.|+.+|||.-..++..+++....
T Consensus 45 F~~a-PVVlDl~~l~----~~---~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~ 95 (120)
T 3ghf_A 45 LKHA-PVVINVSGLE----SP---VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRM 95 (120)
T ss_dssp HTTC-EEEEEEEECC----SS---CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHH
T ss_pred hCCC-cEEEEccccC----Ch---HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHC
Confidence 4565 8999885222 11 24666667778889999999876555577777766
No 306
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=64.18 E-value=9 Score=27.15 Aligned_cols=47 Identities=4% Similarity=-0.116 Sum_probs=27.3
Q ss_pred cEEEEEEEcC----CCCCCChhhHHHHHHHHHHHhhCCe-EEEEEeCCChhhHHHHHHHh
Q 028461 109 KYVILFFYPL----DFTFVCPTEITAFSDRYTEFEKLNT-EILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 109 ~~vlL~f~~~----t~Cp~C~~~~~~l~~~~~~~~~~gv-~vi~Vs~d~~~~~~~~~~~~ 163 (208)
+.||||.- + ..||+|.....-|. +.|+ .+..+.+++....++.+++.
T Consensus 20 ~~VvvF~K-gt~~~P~C~fc~~ak~lL~-------~~gv~~~~~~~v~~~~~~r~~l~~~ 71 (118)
T 2wul_A 20 DKVVVFLK-GTPEQPQCGFSNAVVQILR-------LHGVRDYAAYNVLDDPELRQGIKDY 71 (118)
T ss_dssp SSEEEEES-BCSSSBSSHHHHHHHHHHH-------HTTCCSCEEEETTSCHHHHHHHHHH
T ss_pred CCEEEEEc-CCCCCCCCHHHHHHHHHHH-------HhCCcCeEeecccCCHHHHHHHHHh
Confidence 35666653 4 36888876554443 3355 35566676555666666665
No 307
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=62.31 E-value=10 Score=29.04 Aligned_cols=46 Identities=9% Similarity=-0.096 Sum_probs=29.8
Q ss_pred ccccCCcEEEEEEEcCCCCCCChhhHHHHH-HHHHHHhh-CCeEEEEEeC
Q 028461 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFS-DRYTEFEK-LNTEILGVST 150 (208)
Q Consensus 103 sd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~-~~~~~~~~-~gv~vi~Vs~ 150 (208)
.+-.++ ..|+.|+ --.||.|....+.+. .+.++|.+ .+++++...+
T Consensus 25 G~~~a~-vtvvef~-D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 25 GKDDAP-VTVVEFG-DYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp SCTTCS-EEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred cCCCCC-EEEEEEE-CCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 333455 6777777 455999998877763 45556653 3577777654
No 308
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=62.20 E-value=18 Score=27.07 Aligned_cols=61 Identities=10% Similarity=0.144 Sum_probs=45.8
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
+|+..-|---|.+.-.....+++.+++-+.+-.||+|..-+.+....|.+.. +|.++.|.+
T Consensus 87 ~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~I---------dFD~iID~~ 147 (157)
T 2r47_A 87 VLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYELL---------DFDCVINAD 147 (157)
T ss_dssp EEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHHS---------CCSEEEEEE
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCccC---------CccEEEEcc
Confidence 3333335557888878888888888884335579999999999999999976 677777754
No 309
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=60.16 E-value=13 Score=29.20 Aligned_cols=48 Identities=6% Similarity=-0.057 Sum_probs=30.9
Q ss_pred ecccccCCcEEEEEEEcCCCCCCChhhHHHH-HHHHHHHhh-CCeEEEEEeC
Q 028461 101 KLSDYIGKKYVILFFYPLDFTFVCPTEITAF-SDRYTEFEK-LNTEILGVST 150 (208)
Q Consensus 101 ~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l-~~~~~~~~~-~gv~vi~Vs~ 150 (208)
.+.+-.++ .+|+.|. --.||.|....+.+ .++.++|-+ .+++++....
T Consensus 33 ~~G~~~A~-vtIvef~-Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~ 82 (226)
T 3f4s_A 33 LLGDPKAP-ILMIEYA-SLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHF 82 (226)
T ss_dssp EESCTTCS-EEEEEEE-CTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEEC
T ss_pred ccCCCCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeC
Confidence 33443455 6677776 44599999888764 667777743 3577776644
No 310
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=59.23 E-value=40 Score=23.41 Aligned_cols=77 Identities=19% Similarity=0.245 Sum_probs=48.8
Q ss_pred EEEEEcCCCCC--CC----hhhHHHHHHHHHHHhhCCeEEEEEeCCC-h--h----hHHHHHHHhhhcCCCCCCcceEEE
Q 028461 112 ILFFYPLDFTF--VC----PTEITAFSDRYTEFEKLNTEILGVSTDS-V--F----SHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 112 lL~f~~~t~Cp--~C----~~~~~~l~~~~~~~~~~gv~vi~Vs~d~-~--~----~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+-.|=|+-+|+ +| ..++..+....+.++++|++|--.+... + | ...+++++. |...+|..++-
T Consensus 7 i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~----G~~~LP~~~VD 82 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKH----GADALPITLVD 82 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTT----CGGGCSEEEET
T ss_pred EEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHc----CcccCCEEEEC
Confidence 56677888886 56 3667888888888899998888776643 2 2 334455544 54444444332
Q ss_pred cC---------ccHHHHHhCCcc
Q 028461 179 DI---------TKSISKSYGVLI 192 (208)
Q Consensus 179 D~---------~~~v~~~~gV~~ 192 (208)
+. ..++.+.+|+.+
T Consensus 83 Gevv~~G~yPt~eEl~~~lgi~~ 105 (106)
T 3ktb_A 83 GEIAVSQTYPTTKQMSEWTGVNL 105 (106)
T ss_dssp TEEEECSSCCCHHHHHHHHCCCC
T ss_pred CEEEEeccCCCHHHHHHHhCCCC
Confidence 21 267777777643
No 311
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=58.69 E-value=5.1 Score=26.09 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=24.2
Q ss_pred cccCCcEEEEEEEcCCCCCCCh------hhHHHHHHHHHHHh
Q 028461 104 DYIGKKYVILFFYPLDFTFVCP------TEITAFSDRYTEFE 139 (208)
Q Consensus 104 d~~gk~~vlL~f~~~t~Cp~C~------~~~~~l~~~~~~~~ 139 (208)
+++|+ .++|--+|+.+|+.|- .+...+.++.++|+
T Consensus 23 ~~~G~-~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~ 63 (78)
T 3ga8_A 23 TFRGR-KTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 63 (78)
T ss_dssp EETTE-EEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHH
T ss_pred EECCE-EEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHH
Confidence 56786 5677777899999994 34555555666665
No 312
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=56.07 E-value=19 Score=24.13 Aligned_cols=35 Identities=17% Similarity=0.130 Sum_probs=24.6
Q ss_pred CCCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHH
Q 028461 95 QEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFS 132 (208)
Q Consensus 95 ~~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~ 132 (208)
.+|..+.|-++.++ .+.|-+- |+ |..|....--|+
T Consensus 25 ~dGGdvelv~v~~g-~V~V~L~-Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 25 RDGGDCTLVDVEDG-IVKLQLH-GA-CGTCPSSTITLK 59 (88)
T ss_dssp HHSCEEEEEECCSS-EEEEEEE-SS-CCSSCHHHHHHH
T ss_pred hcCCeEEEEEEECC-EEEEEEe-ec-CCCCcchHHHHH
Confidence 35567888888775 6777776 88 888975544444
No 313
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=54.45 E-value=45 Score=23.32 Aligned_cols=79 Identities=15% Similarity=0.269 Sum_probs=47.7
Q ss_pred EEEEEcCCCCC--CC----hhhHHHHHHHHHHHhhCCeEEEEEeCCC-h------hhHHHHHHHhhhcCCCCCCcceEEE
Q 028461 112 ILFFYPLDFTF--VC----PTEITAFSDRYTEFEKLNTEILGVSTDS-V------FSHLAWVQTDRKSGGLGDLKYPLIA 178 (208)
Q Consensus 112 lL~f~~~t~Cp--~C----~~~~~~l~~~~~~~~~~gv~vi~Vs~d~-~------~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (208)
+-.|=|+=+|+ +| -.++-++....+.++++|++|--.+... + ....+++++. |...++..++-
T Consensus 4 i~ifepamCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~----G~~~LP~~~VD 79 (110)
T 3kgk_A 4 LMVFDPAMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEAS----GAEGLPLLLLD 79 (110)
T ss_dssp EEEEECC-------------CHHHHHHHHHHHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHH----CGGGCCEEEET
T ss_pred eEEecchhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHc----CcccCCEEEEC
Confidence 44566777764 56 3668888888888999999888877643 2 2445666666 54444444432
Q ss_pred cC---------ccHHHHHhCCccCC
Q 028461 179 DI---------TKSISKSYGVLIPD 194 (208)
Q Consensus 179 D~---------~~~v~~~~gV~~~~ 194 (208)
+. ..++.+.+|+..++
T Consensus 80 Gevv~~G~yPt~eEl~~~lgi~~~~ 104 (110)
T 3kgk_A 80 GETVMAGRYPKRAELARWFGIPLDK 104 (110)
T ss_dssp TEEEEESSCCCHHHHHHHHTCCCCC
T ss_pred CEEEEeccCCCHHHHHHHhCCCccc
Confidence 22 27899999986554
No 314
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=46.06 E-value=17 Score=32.51 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=19.1
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCC
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d 151 (208)
|+.|. ..|||.|......|.+ .|+..-.|.++
T Consensus 20 v~vy~-~~~Cp~C~~~k~~L~~-------~~i~~~~~dv~ 51 (598)
T 2x8g_A 20 VILFS-KTTCPYCKKVKDVLAE-------AKIKHATIELD 51 (598)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------CCCCcEEEEcc
Confidence 34444 6899999966555543 34544445554
No 315
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=45.71 E-value=2.7 Score=21.62 Aligned_cols=11 Identities=27% Similarity=0.329 Sum_probs=8.6
Q ss_pred CCCCChhhHHH
Q 028461 120 FTFVCPTEITA 130 (208)
Q Consensus 120 ~Cp~C~~~~~~ 130 (208)
.||+|++.+|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 39999988764
No 316
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=44.71 E-value=35 Score=27.98 Aligned_cols=66 Identities=11% Similarity=-0.015 Sum_probs=40.2
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhh-CCeEEEEEeCCChhhHHH-HHHHhhhcCCCC-CCcceEEEcC
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSVFSHLA-WVQTDRKSGGLG-DLKYPLIADI 180 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~-~gv~vi~Vs~d~~~~~~~-~~~~~~~~~~~~-~~~f~~l~D~ 180 (208)
..+|.|. ..+|+.|...+..+.++.++++. ..+.++.|..+.-....+ |.+.. |+. ++|.-++.+.
T Consensus 247 ~~~l~f~-~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~----gi~~~~P~~~i~~~ 315 (350)
T 1sji_A 247 IHIVAFA-ERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTF----KIDLFKPQIGVVNV 315 (350)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHC----CSCTTSCEEEEEES
T ss_pred cEEEEEE-cCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhc----CCCccCCcEEEEec
Confidence 3455566 67788889889999999999984 456666665543111111 33555 553 2344455555
No 317
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=42.02 E-value=30 Score=22.34 Aligned_cols=40 Identities=18% Similarity=-0.023 Sum_probs=26.5
Q ss_pred CCC-ceEecccccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHH
Q 028461 95 QEF-INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTE 137 (208)
Q Consensus 95 ~~g-~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~ 137 (208)
.+| ..+.+-++.++ .+.|-+- |+ |..|.+..-.+.+...+
T Consensus 22 ~dGGGdvelv~v~~g-~V~v~l~-Ga-C~gc~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 22 GTGGGGLQFLMIKGP-IVKVRLT-GP-AAVVRTVRIAVSKKLRE 62 (74)
T ss_dssp TTTCCCCCCCEEETT-EEEECCC-SS-SSSSSSHHHHHHHHHHH
T ss_pred hcCCCcEEEEEEeCC-EEEEEEe-cC-CcchHHHHHHHHHHHHH
Confidence 345 67788887775 6777776 88 88996554456554443
No 318
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=40.92 E-value=5.8 Score=21.86 Aligned_cols=19 Identities=11% Similarity=0.342 Sum_probs=13.4
Q ss_pred CCCChhhHHHHHHHHHHHh
Q 028461 121 TFVCPTEITAFSDRYTEFE 139 (208)
Q Consensus 121 Cp~C~~~~~~l~~~~~~~~ 139 (208)
||.|...+....++..-|+
T Consensus 8 CP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp CTTTCCEESSHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHH
Confidence 9999888766665555554
No 319
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=38.59 E-value=63 Score=21.60 Aligned_cols=57 Identities=7% Similarity=-0.041 Sum_probs=32.7
Q ss_pred HHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 132 SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 132 ~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
++..+..+.....++.+..|.+..........-+.. +.++..+.+...++.++.|..
T Consensus 21 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~---~ip~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 21 NETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLS---DIPVYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHT---TCCEEEECCCSCGGGGTTCST
T ss_pred HHHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHc---CCCEEEeCCCHHHHHHHHCCC
Confidence 344444555456677777777666665555443322 455444435567777777763
No 320
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=37.59 E-value=47 Score=27.59 Aligned_cols=53 Identities=11% Similarity=-0.016 Sum_probs=36.7
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhC-CeEEEEEeCCChhh-HHHHHHHh
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVSTDSVFS-HLAWVQTD 163 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~-gv~vi~Vs~d~~~~-~~~~~~~~ 163 (208)
..++.|+ ..+|+.|...+..|.++.++|+++ .+.++.|..+.-.. +.-|.+..
T Consensus 249 ~~~~~f~-~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~f 303 (367)
T 3us3_A 249 IHIVAFA-EEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTF 303 (367)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHH
T ss_pred cEEEEEE-cCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhc
Confidence 4666677 455777888899999999999876 47787776654322 23355555
No 321
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=35.63 E-value=72 Score=21.36 Aligned_cols=56 Identities=4% Similarity=-0.081 Sum_probs=29.9
Q ss_pred HHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCCc
Q 028461 133 DRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 133 ~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV~ 191 (208)
+..+..+.....++.+..|.+.....+....-+.. +.++..+.+...++.+..|..
T Consensus 23 ~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~---~vp~~~~~~s~~eLG~a~G~~ 78 (101)
T 1w41_A 23 KSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLS---GIPVYEFEGTSVELGTLLGRP 78 (101)
T ss_dssp HHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHH---TCCEEEESSCHHHHHHHTTCS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhc---CCCEEEecCCHHHHHHHhCCC
Confidence 33344444445666677776655555444433222 344433335567777777753
No 322
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=33.01 E-value=84 Score=22.05 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=26.0
Q ss_pred HHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 131 FSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 131 l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
+++..++.+++|++++.|..|..+..+.-.++.-.. .+.....++|..
T Consensus 92 ikdfieeakergvevfvvynnkdddrrkeaqqefrs---dgvdvrtvsdke 139 (162)
T 2l82_A 92 IKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRS---DGVDVRTVSDKE 139 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHCC---SSCEEEEESSHH
T ss_pred HHHHHHHHHhcCcEEEEEecCCCchhHHHHHHHhhh---cCceeeecCCHH
Confidence 344456667788888877554333332222222211 256777788754
No 323
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=32.01 E-value=44 Score=24.22 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhCCeEEEEEeCCC---hhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 128 ITAFSDRYTEFEKLNTEILGVSTDS---VFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 128 ~~~l~~~~~~~~~~gv~vi~Vs~d~---~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
.+...+..++++++|..|+.++-.+ ......|.+++ ++++..+...
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~-------gi~~~~I~~n 74 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR-------GLEFYAANKD 74 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT-------TCCCSEESSS
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHc-------CCCeEEEEcC
Confidence 3455566677778898888777654 45667777776 5667766653
No 324
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=31.21 E-value=1.2e+02 Score=27.17 Aligned_cols=53 Identities=13% Similarity=0.066 Sum_probs=34.7
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccC--CcEEEEEEEcCCCCCCCh-hhHHHHHH
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIG--KKYVILFFYPLDFTFVCP-TEITAFSD 133 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~g--k~~vlL~f~~~t~Cp~C~-~~~~~l~~ 133 (208)
+.+|..+|+..+.. ..+|+.+.|.|+.+ .+++||.|- +.-.+.+. ..+..+.+
T Consensus 467 ~~~G~r~p~~~~~~--~~~g~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~~~~~~~~~ 522 (639)
T 2dkh_A 467 FTVGMRFHSAPVVR--VCDAKPVQLGHCGKADGRWRLYAFA-AQNDLAQPESGLLALCR 522 (639)
T ss_dssp SCTTSBCCCCEEEE--TTTCCEEEGGGGCCSSSCEEEEEEC-CTTTTTCTTSHHHHHHH
T ss_pred CCCcCCCCCCeEEe--cCCCCEEEHHHhhccCCCEEEEEec-CCCCchhhHHHHHHHHH
Confidence 57899999999852 35778899988542 248899885 44344444 33444433
No 325
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=29.92 E-value=1.6e+02 Score=23.64 Aligned_cols=92 Identities=10% Similarity=0.120 Sum_probs=51.2
Q ss_pred CCCCCeEEeeecCCCCceEeccccc------CCcEEEEEEEcCCCCCCChhhHHH-HHHHHH---------HHhhCCeEE
Q 028461 82 NTAPDFAAEAVFDQEFINVKLSDYI------GKKYVILFFYPLDFTFVCPTEITA-FSDRYT---------EFEKLNTEI 145 (208)
Q Consensus 82 ~~~P~f~l~~~~~~~g~~v~Lsd~~------gk~~vlL~f~~~t~Cp~C~~~~~~-l~~~~~---------~~~~~gv~v 145 (208)
+.+|-|.+. |.+|..+-.+.-. |++.+.++|. ++.+.-. |.++.. ++. .+++|
T Consensus 12 ~~VPVF~It---n~~G~Pll~~~~~~~~~~~~~~~V~~~F~-------s~~dA~~~L~~lk~~~~~np~~~~~~-~~~kV 80 (252)
T 4ev1_A 12 DSVPIYLVT---NEKGLPLSRPLPNAPNGQKAGGSITGAYM-------SRQEAQAFINELRNAKNKDPKMQEIV-KSLQV 80 (252)
T ss_dssp TTSEEEEEE---CTTCCBCEEECCCCTTSCCSCSEEEEEES-------CHHHHHHHHHHHHHCSSCCHHHHHHH-TTCEE
T ss_pred cCCcEEEEE---CCCCCeEEEecCCccccccCCCeEEEEEe-------cHHHHHHHHHHHHhccccCchhhhhc-cCceE
Confidence 456889987 8899887665433 1224444443 3443332 333333 222 36899
Q ss_pred EEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCccHHHHHhCC
Q 028461 146 LGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (208)
Q Consensus 146 i~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~v~~~~gV 190 (208)
..|+.+....+ +.+... ...++.|.++-|.. ++..+..+
T Consensus 81 ~~vsL~~vyql--~~~~~~---k~~~l~F~fvP~~~-qV~~A~~L 119 (252)
T 4ev1_A 81 TAVPLGVIYQQ--LQQTKK---DPNRLLFAFKPVDQ-EIKGAMDL 119 (252)
T ss_dssp EEEEHHHHHHH--HHHTTT---CTTCEEEEEECCHH-HHHHHHHH
T ss_pred EEeeHHHHHHH--HHhhcc---CCcCceEEEcCCHH-HHHHHHHH
Confidence 99998874433 222221 22367788998863 45554444
No 326
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=28.33 E-value=93 Score=20.65 Aligned_cols=38 Identities=11% Similarity=-0.053 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 126 TEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 126 ~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
...|...++.++++++|+.++.+|-.+......+.+..
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC
Confidence 45677888888888889998888876665555666555
No 327
>2kpt_A Putative secreted protein; methods development, alpha/beta, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum}
Probab=27.19 E-value=1.6e+02 Score=21.29 Aligned_cols=55 Identities=16% Similarity=0.171 Sum_probs=35.1
Q ss_pred hhhHHHHHHHHHHHh-hCCeEEEEEeCCC--hhhHHHHHHHhhhcCCCCCCcceEEEcC
Q 028461 125 PTEITAFSDRYTEFE-KLNTEILGVSTDS--VFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (208)
Q Consensus 125 ~~~~~~l~~~~~~~~-~~gv~vi~Vs~d~--~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (208)
..+...|.+..+++. +.|++|+.|.+++ .+....|..+..+..+ ++-...++.+.
T Consensus 26 ~~~~~~L~~~l~~l~~~tg~qi~VvtV~sl~g~~ie~yA~~l~~~wg-G~ngvLLlVa~ 83 (148)
T 2kpt_A 26 SSDITNIQAAIDDVKASEQKVIFVVFLSSFDGVDPETWTQQALQANG-GGNVLIYALAP 83 (148)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEEEEEECSCCTTTCHHHHHHHHHHHHT-CSSEEEEEEEG
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEEEEECCCCCCCHHHHHHHHHHHhC-CCCcEEEEEEe
Confidence 456667777777775 5678888887754 3566778777765554 44445555443
No 328
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=26.99 E-value=41 Score=27.94 Aligned_cols=38 Identities=8% Similarity=-0.009 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 126 TEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 126 ~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
...|.+.++.+.+++.|++|+.||-...+.++.|.+..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 55788888999999999999999999999999999875
No 329
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=26.60 E-value=61 Score=24.21 Aligned_cols=37 Identities=5% Similarity=-0.116 Sum_probs=23.9
Q ss_pred EEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEe
Q 028461 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS 149 (208)
Q Consensus 111 vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs 149 (208)
.|.+|+ ---||.|-...+.+.++.+ +.+.+++|....
T Consensus 9 ~I~~f~-D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 9 VLWYIA-DPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp EEEEEE-CTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred eEEEEE-CCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 344554 5569999977777777665 444467766553
No 330
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=26.12 E-value=62 Score=27.42 Aligned_cols=39 Identities=15% Similarity=0.123 Sum_probs=34.6
Q ss_pred hhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 125 PTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 125 ~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
.+..|.+.++.+.+++.|+.|+-||-...+.++.|.++.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~l 258 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDT 258 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 456788899999999999999999999888999999876
No 331
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=25.21 E-value=29 Score=23.43 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=22.0
Q ss_pred CCceEecccccCCcEEEEEEEcCCCCCCChhhHHHHH
Q 028461 96 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFS 132 (208)
Q Consensus 96 ~g~~v~Lsd~~gk~~vlL~f~~~t~Cp~C~~~~~~l~ 132 (208)
+|..+.|-++.++ .+.|-+- |+ |..|....--|+
T Consensus 33 dGGdvelv~v~~g-~V~v~l~-Ga-C~gC~ss~~Tlk 66 (92)
T 1veh_A 33 DGGDVIYRGFEDG-IVRLKLQ-GS-CTSCPSSIITLK 66 (92)
T ss_dssp HSCCCCEEEEETT-EEEECCC-CC-CCCCHHHHHHTH
T ss_pred cCCeEEEEEEeCC-EEEEEEe-ec-CCCCCCcHHHHH
Confidence 3445667677665 6777775 88 889975544443
No 332
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=24.83 E-value=1.7e+02 Score=22.07 Aligned_cols=35 Identities=14% Similarity=-0.091 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 129 TAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 129 ~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
+...+..++++++|+.|+.++-++......+.+..
T Consensus 25 ~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l 59 (227)
T 1l6r_A 25 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFL 59 (227)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHh
Confidence 45556667777889999888888888888888777
No 333
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=24.61 E-value=1.5e+02 Score=25.56 Aligned_cols=68 Identities=15% Similarity=0.132 Sum_probs=40.0
Q ss_pred cEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcCc
Q 028461 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (208)
Q Consensus 109 ~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (208)
.++.+.-. +.++.+-. ..-.+...++.+.|.++|-|++++.+..++..+-.++.. ..+.+.|++.|-.
T Consensus 22 ~PI~VQSM--tnT~T~Dv--~aTv~QI~~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~-~~~~~vPLVADiH 89 (406)
T 4g9p_A 22 HPIAVQSM--TNTPTRDV--EATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLL-AEGVEVPLVGDFH 89 (406)
T ss_dssp SCCEEEEE--CCSCTTCH--HHHHHHHHHHHHHTCSEEEEECCSHHHHHHHHHHHHHHH-HTTCCCCEEEECC
T ss_pred Cceeeeec--CCCCcccH--HHHHHHHHHHHHcCCCEEEEecCCHHHHHhHHHHHHHHH-hcCCCCceEeeec
Confidence 46666654 33554432 222222345556799999999999877766543321100 0157899999985
No 334
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=24.06 E-value=1.2e+02 Score=20.99 Aligned_cols=35 Identities=9% Similarity=0.183 Sum_probs=23.5
Q ss_pred CcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEE
Q 028461 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV 148 (208)
Q Consensus 108 k~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~V 148 (208)
+..+||-|+ .+||..| .+.+.+..+.+ + ++.+..+
T Consensus 39 ~~v~VVGfF-~~~~~~~---~~~F~~~A~~~-~-d~~F~~t 73 (124)
T 2l4c_A 39 TEVAVIGFF-QDLEIPA---VPILHSMVQKF-P-GVSFGIS 73 (124)
T ss_dssp SSEEEEEEC-SCTTSTH---HHHHHHHHHHC-T-TSEEEEE
T ss_pred CCCEEEEEE-CCCCChh---HHHHHHHHHhC-C-CceEEEE
Confidence 346777777 7888777 56677777777 3 5665433
No 335
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=23.42 E-value=2.5e+02 Score=23.82 Aligned_cols=54 Identities=22% Similarity=0.213 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHhhhcCCCCCCcceEEEcC--ccHHH
Q 028461 126 TEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI--TKSIS 185 (208)
Q Consensus 126 ~~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~--~~~v~ 185 (208)
.......+...++.+.|.++|=|.+++.+..++..+-. + ..+.|++.|. +..++
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~~~~a~al~~I~-~-----~~~vPlvaDiHf~~~la 98 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIV-K-----KSPMPVIADIHFAPSYA 98 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHH-H-----HCSSCEEEECCSCHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHH-h-----cCCCCEEEeCCCCHHHH
Confidence 44556666667788889999999998877665544432 2 3579999995 44444
No 336
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=23.26 E-value=8.5 Score=27.48 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=24.3
Q ss_pred EEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEeC
Q 028461 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs~ 150 (208)
.+||.|. -..|+.|......|+++.++ .+|+-|++
T Consensus 3 ~tLILfG-KP~C~vCe~~s~~l~~lede-----Y~ilrVNI 37 (124)
T 2g2q_A 3 NVLIIFG-KPYCSICENVSDAVEELKSE-----YDILHVDI 37 (124)
T ss_dssp EEEEEEE-CTTCHHHHHHHHHHHTTTTT-----EEEEEEEC
T ss_pred ceEEEeC-CCccHHHHHHHHHHHHhhcc-----ccEEEEEe
Confidence 4677776 78899999877777554433 56666655
No 337
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=23.19 E-value=85 Score=25.21 Aligned_cols=37 Identities=5% Similarity=-0.020 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHhhCCeEEEEEeCCC----hhhHHHHHHHh
Q 028461 127 EITAFSDRYTEFEKLNTEILGVSTDS----VFSHLAWVQTD 163 (208)
Q Consensus 127 ~~~~l~~~~~~~~~~gv~vi~Vs~d~----~~~~~~~~~~~ 163 (208)
-+|...++.+.++++|++|+.|+-.+ .+....|++.+
T Consensus 102 ~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~l 142 (262)
T 3ocu_A 102 AVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRL 142 (262)
T ss_dssp ECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHc
Confidence 46777888888899999999997543 35777888888
No 338
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=23.14 E-value=52 Score=28.68 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=27.7
Q ss_pred CCCCCCCCCeEEeeecCCCCceEecccccCCcEEEEEE
Q 028461 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFF 115 (208)
Q Consensus 78 ~~vG~~~P~f~l~~~~~~~g~~v~Lsd~~gk~~vlL~f 115 (208)
..+|..+|+.-+. .+|+.+++-|+.|..++||.+
T Consensus 420 ~~pG~r~p~~~l~----~~~~~~~~~dl~g~~f~ll~~ 453 (535)
T 3ihg_A 420 GRPGFRGPHVLVS----RHGERLSTVDLFGDGWTLLAG 453 (535)
T ss_dssp CCTTSBCCCCEEE----ETTEEEEGGGGCSSSEEEEEC
T ss_pred CCCCCcCCCceee----cCCceeeHHHhcCCceEEEec
Confidence 6799999999884 356788999998987887764
No 339
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=22.97 E-value=2.2e+02 Score=20.60 Aligned_cols=42 Identities=29% Similarity=0.354 Sum_probs=20.9
Q ss_pred cccCCcEEEEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEE
Q 028461 104 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILG 147 (208)
Q Consensus 104 d~~gk~~vlL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~ 147 (208)
++.|| .+.++.. +...+.-...-..+.++.+.+++.|.++++
T Consensus 85 ~l~gk-~~a~fg~-g~~~~y~~~~~~a~~~l~~~l~~~G~~~~~ 126 (179)
T 1yob_A 85 DFSGK-TVALFGL-GDQVGYPENYLDALGELYSFFKDRGAKIVG 126 (179)
T ss_dssp CCTTC-EEEEEEE-CCTTTCTTTTTHHHHHHHHHHHTTTCEEEC
T ss_pred ccCCC-EEEEEEE-CCCcchhHHHHHHHHHHHHHHHHCCCEEEE
Confidence 56776 4454443 432211111223445556666667777764
No 340
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=22.44 E-value=1.3e+02 Score=25.56 Aligned_cols=40 Identities=13% Similarity=-0.004 Sum_probs=23.6
Q ss_pred EEEEcCCCCCCChhhHHHHHHHHHHHh---hCCeEEEEEeCCC
Q 028461 113 LFFYPLDFTFVCPTEITAFSDRYTEFE---KLNTEILGVSTDS 152 (208)
Q Consensus 113 L~f~~~t~Cp~C~~~~~~l~~~~~~~~---~~gv~vi~Vs~d~ 152 (208)
|.|.+|..||+|..-...+.+..+--. ..|-.||..+..|
T Consensus 58 ieli~GPGCPVCVtp~~~ID~ai~LA~~~~~~~~~vi~~TfGD 100 (372)
T 2z1d_A 58 VKVVSGPGCPVCITPVEDIVAMQLIMRKAREEGEEIILTTFGD 100 (372)
T ss_dssp EEEEECCCCTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEecCCCCccEECcHHHHHHHHHHHhhhcccCCCeEEEeccc
Confidence 344469999999877666665444333 3123455566544
No 341
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=21.87 E-value=1.7e+02 Score=21.46 Aligned_cols=37 Identities=8% Similarity=-0.121 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 127 EITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 127 ~~~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
..|...++.++++++|+.++.||.......+.+.+..
T Consensus 93 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~ 129 (232)
T 3fvv_A 93 LTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAF 129 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 3688888888899999999988888877778888876
No 342
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=21.62 E-value=1.3e+02 Score=21.88 Aligned_cols=35 Identities=6% Similarity=-0.038 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 129 TAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 129 ~~l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
+.+.++.+++++.|+.++.++-.+......+.+..
T Consensus 94 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~ 128 (233)
T 3s6j_A 94 PGAVELLETLDKENLKWCIATSGGIDTATINLKAL 128 (233)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhc
Confidence 44556667777778888878777766666666655
No 343
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=21.22 E-value=74 Score=23.81 Aligned_cols=36 Identities=6% Similarity=-0.061 Sum_probs=26.9
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHHHHhhCCeEEEEEe
Q 028461 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS 149 (208)
Q Consensus 112 lL~f~~~t~Cp~C~~~~~~l~~~~~~~~~~gv~vi~Vs 149 (208)
|.+|+ ---||.|-.-.+.|.++.+++.+ +++|....
T Consensus 5 I~~~~-D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p 40 (208)
T 3kzq_A 5 LYYVH-DPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVV 40 (208)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEE
T ss_pred EEEEE-CCCCchhhhhhHHHHHHHHhCCC-CceEEEEe
Confidence 44444 56699999999999999988853 67776554
No 344
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=21.20 E-value=2.1e+02 Score=19.78 Aligned_cols=33 Identities=6% Similarity=-0.038 Sum_probs=23.9
Q ss_pred HHHHHHHHhhCCeEEEEEeCCChhhHHHHHHHh
Q 028461 131 FSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (208)
Q Consensus 131 l~~~~~~~~~~gv~vi~Vs~d~~~~~~~~~~~~ 163 (208)
..+..++++++|+.++.+|-++......+.+..
T Consensus 41 ~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~ 73 (162)
T 2p9j_A 41 DGIGIKLLQKMGITLAVISGRDSAPLITRLKEL 73 (162)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 345666777788888888877766677777665
No 345
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=20.53 E-value=2e+02 Score=19.46 Aligned_cols=11 Identities=9% Similarity=0.160 Sum_probs=5.4
Q ss_pred CccHHHHHhCC
Q 028461 180 ITKSISKSYGV 190 (208)
Q Consensus 180 ~~~~v~~~~gV 190 (208)
...++.++.|.
T Consensus 72 sk~eLG~a~G~ 82 (110)
T 3cpq_A 72 TSLELGAVCGK 82 (110)
T ss_dssp CHHHHHHHTTC
T ss_pred CHHHHHHHhCC
Confidence 34455555554
No 346
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=20.23 E-value=28 Score=29.58 Aligned_cols=18 Identities=0% Similarity=-0.023 Sum_probs=12.2
Q ss_pred EEEEEEEcCCCCCCChhhHH
Q 028461 110 YVILFFYPLDFTFVCPTEIT 129 (208)
Q Consensus 110 ~vlL~f~~~t~Cp~C~~~~~ 129 (208)
.++|+. .+|||.|.....
T Consensus 262 ~VvVYs--k~~CPyC~~Ak~ 279 (362)
T 2jad_A 262 EIFVAS--KTYCPYSHAALN 279 (362)
T ss_dssp SEEEEE--CTTCHHHHHHHH
T ss_pred CEEEEE--cCCCcchHHHHH
Confidence 345443 689999997654
No 347
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=20.11 E-value=27 Score=30.19 Aligned_cols=17 Identities=29% Similarity=0.593 Sum_probs=14.5
Q ss_pred CCCCCChhhHHHHHHHH
Q 028461 119 DFTFVCPTEITAFSDRY 135 (208)
Q Consensus 119 t~Cp~C~~~~~~l~~~~ 135 (208)
.|||+|++.+.++.+.|
T Consensus 389 ~Fc~VCr~aI~~~i~fy 405 (407)
T 3p1v_A 389 EFCPVCQRAIRRMIEFY 405 (407)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhc
Confidence 59999999998887765
No 348
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=20.07 E-value=2.8e+02 Score=20.91 Aligned_cols=21 Identities=10% Similarity=0.317 Sum_probs=16.4
Q ss_pred CCcceEEEcCccHHHHHhCCc
Q 028461 171 DLKYPLIADITKSISKSYGVL 191 (208)
Q Consensus 171 ~~~f~~l~D~~~~v~~~~gV~ 191 (208)
.+.+..+.|.+..+.+.|||-
T Consensus 184 ~i~v~~~~~~~~~l~~~f~v~ 204 (244)
T 3q6o_A 184 GVAVRRVLNTEANVVRKFGVT 204 (244)
T ss_dssp TEEEEEEETTCHHHHHHHTCC
T ss_pred ceEEEEEeCchHHHHHHcCCC
Confidence 456777777778999999984
Done!