Query 028462
Match_columns 208
No_of_seqs 119 out of 1365
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 19:45:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028462.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028462hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 2.9E-35 1E-39 240.9 13.4 182 8-204 13-208 (256)
2 3i3n_A Kelch-like protein 11; 100.0 1.9E-34 6.5E-39 239.0 13.4 182 8-203 14-215 (279)
3 3htm_A Speckle-type POZ protei 100.0 4.5E-33 1.5E-37 214.7 11.3 154 10-178 18-172 (172)
4 3hqi_A Speckle-type POZ protei 100.0 1.5E-30 5E-35 218.6 13.0 153 10-177 158-311 (312)
5 4eoz_A Speckle-type POZ protei 100.0 3.5E-30 1.2E-34 193.2 3.5 136 10-160 9-145 (145)
6 2if5_A Zinc finger and BTB dom 99.9 4.9E-27 1.7E-31 171.0 8.4 112 8-134 7-119 (120)
7 1r29_A B-cell lymphoma 6 prote 99.9 1.6E-26 5.4E-31 170.0 9.5 113 8-136 11-125 (127)
8 2z8h_A Transcription regulator 99.9 8.5E-27 2.9E-31 174.0 7.0 119 8-143 18-138 (138)
9 3b84_A Zinc finger and BTB dom 99.9 1.6E-26 5.5E-31 168.3 7.4 111 7-136 5-116 (119)
10 2vkp_A BTB/POZ domain-containi 99.9 1.7E-26 5.7E-31 165.2 6.4 104 20-138 2-109 (109)
11 1buo_A POZ domain, protein (pr 99.9 9.7E-26 3.3E-30 164.5 10.6 110 8-137 10-120 (121)
12 2yy9_A Zinc finger and BTB dom 99.9 3.7E-26 1.3E-30 169.9 8.2 116 7-141 6-122 (135)
13 2ppi_A Gigaxonin; BTB domain, 99.9 2.6E-26 8.9E-31 172.7 5.9 112 8-134 29-143 (144)
14 2vpk_A Myoneurin; transcriptio 99.9 1.8E-25 6.1E-30 161.8 8.1 110 7-135 3-115 (116)
15 2q81_A MIZ-1 protein; BTB/POZ 99.9 1.4E-25 4.8E-30 163.3 6.0 109 7-135 8-117 (119)
16 2ihc_A Transcription regulator 99.9 8.1E-26 2.8E-30 165.7 0.6 111 8-135 11-123 (124)
17 3ohu_A Transcription regulator 99.9 1.1E-25 3.9E-30 164.9 0.1 110 8-134 14-125 (125)
18 3ga1_A Nucleus accumbens-assoc 99.9 4.8E-25 1.6E-29 162.6 1.9 111 8-137 15-127 (129)
19 3fkc_A Transcriptional regulat 99.9 3.8E-23 1.3E-27 149.8 8.9 101 8-128 13-115 (116)
20 3m5b_A Zinc finger and BTB dom 99.9 1.5E-22 5.3E-27 147.3 7.3 100 11-136 17-117 (119)
21 2ast_A S-phase kinase-associat 99.6 1.9E-15 6.5E-20 115.0 8.5 104 29-147 3-135 (159)
22 4ajy_C Transcription elongatio 99.4 5.3E-13 1.8E-17 93.2 5.5 80 29-123 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.3 3.7E-12 1.3E-16 94.9 5.4 99 29-146 4-129 (141)
24 2p1m_A SKP1-like protein 1A; F 99.2 4.1E-12 1.4E-16 96.6 4.4 111 28-154 5-144 (160)
25 3v7d_A Suppressor of kinetocho 98.7 3.5E-08 1.2E-12 75.4 7.3 103 27-142 7-137 (169)
26 1hv2_A Elongin C, ELC1; protei 98.6 1.8E-08 6.2E-13 70.3 3.8 80 28-123 5-99 (99)
27 2eqx_A Kelch repeat and BTB do 98.6 3.1E-08 1.1E-12 69.7 4.6 69 135-203 5-81 (105)
28 2fnj_C Transcription elongatio 98.6 2.2E-08 7.6E-13 69.4 2.6 80 29-123 3-96 (96)
29 3drz_A BTB/POZ domain-containi 98.3 1.2E-06 3.9E-11 61.9 5.8 95 28-136 7-106 (107)
30 1vcb_B Protein (elongin C); tu 98.2 1.6E-06 5.6E-11 61.6 4.8 84 27-123 17-112 (112)
31 3drx_A BTB/POZ domain-containi 97.2 0.00015 5.2E-09 56.4 3.1 95 28-136 13-112 (202)
32 3kvt_A Potassium channel prote 96.3 0.0013 4.5E-08 46.6 1.7 96 28-137 6-105 (115)
33 1s1g_A Potassium voltage-gated 96.2 0.0095 3.3E-07 42.7 5.8 88 27-127 13-100 (124)
34 1t1d_A Protein (potassium chan 95.5 0.019 6.4E-07 39.5 4.6 87 29-127 3-90 (100)
35 1nn7_A Potassium channel KV4.2 95.3 0.007 2.4E-07 42.1 1.8 86 29-127 2-87 (105)
36 2nz0_B Potassium voltage-gated 95.2 0.022 7.6E-07 41.6 4.4 88 27-127 35-122 (140)
37 2eqx_A Kelch repeat and BTB do 90.9 0.64 2.2E-05 31.7 6.1 64 107-171 9-84 (105)
38 2vkp_A BTB/POZ domain-containi 84.0 1.2 4E-05 30.0 4.0 33 137-169 76-108 (109)
39 2r9r_B Paddle chimera voltage 80.5 2.8 9.4E-05 36.9 5.9 88 28-127 53-141 (514)
40 1r29_A B-cell lymphoma 6 prote 77.6 6.5 0.00022 27.1 6.2 32 138-169 95-126 (127)
41 3htm_A Speckle-type POZ protei 77.0 2.2 7.4E-05 31.1 3.6 33 107-139 133-165 (172)
42 2yy9_A Zinc finger and BTB dom 72.0 4.3 0.00015 28.6 4.0 36 137-172 86-121 (135)
43 2vpk_A Myoneurin; transcriptio 71.2 9.3 0.00032 25.8 5.6 30 138-167 86-115 (116)
44 2q81_A MIZ-1 protein; BTB/POZ 69.5 4.8 0.00016 27.6 3.7 31 137-167 87-117 (119)
45 3hqi_A Speckle-type POZ protei 66.8 4.6 0.00016 32.6 3.6 33 107-139 273-305 (312)
46 3b84_A Zinc finger and BTB dom 66.4 3.3 0.00011 28.4 2.3 32 138-169 86-117 (119)
47 2if5_A Zinc finger and BTB dom 65.5 7.9 0.00027 26.3 4.2 29 138-166 91-119 (120)
48 1buo_A POZ domain, protein (pr 65.3 16 0.00054 24.8 5.8 32 137-168 88-119 (121)
49 2z8h_A Transcription regulator 60.9 2.8 9.7E-05 29.6 1.1 35 137-171 100-134 (138)
50 2ppi_A Gigaxonin; BTB domain, 52.0 7.2 0.00025 27.8 2.1 30 137-166 114-143 (144)
51 4eoz_A Speckle-type POZ protei 49.9 8 0.00027 27.0 2.0 33 138-170 91-123 (145)
52 3i3n_A Kelch-like protein 11; 47.7 15 0.0005 29.0 3.5 65 107-171 140-218 (279)
53 3m5b_A Zinc finger and BTB dom 46.4 15 0.00051 25.2 2.9 32 137-168 86-117 (119)
54 2ast_A S-phase kinase-associat 46.4 27 0.00093 25.2 4.5 63 107-171 50-127 (159)
55 3hve_A Gigaxonin; ubiquitin, c 46.1 11 0.00039 29.3 2.5 31 107-137 132-162 (256)
56 1fs1_B SKP1, cyclin A/CDK2-ass 41.9 68 0.0023 22.6 6.0 82 88-171 25-122 (141)
57 3ga1_A Nucleus accumbens-assoc 38.0 11 0.00037 26.0 1.1 33 137-169 95-127 (129)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=2.9e-35 Score=240.94 Aligned_cols=182 Identities=16% Similarity=0.227 Sum_probs=158.0
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCC--CCCCceEEee-
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGAS--SCETEIVNLP- 84 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~--e~~~~~i~l~- 84 (208)
.+...+++++++++++|.+|||+|.++ |+.|+|||.||+++|+||++||. +++. ++....|.++
T Consensus 13 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~~Hr~vLaa~S~yF~~mf~------------~~~~~~e~~~~~i~l~~ 79 (256)
T 3hve_A 13 QHAARLLRALSSFREESRFCDAHLVLD-GEEIPVQKNILAAASPYIRTKLN------------YNPPKDDGSTYKIELEG 79 (256)
T ss_dssp TTHHHHHHHHHTCCC--CCCCEEEEET-TEEEEECHHHHHTTCHHHHHTC-----------------------CEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEechHHHHHHcCHHHHHHhC------------CCCCcccCCCCeEEeCC
Confidence 456789999999999999999999996 99999999999999999999998 7776 6677899999
Q ss_pred cCHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhHHHHHHHHhcCChHHHHHHHHH
Q 028462 85 ISREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNALNAFKNAVGCSHRALLEAVLD 164 (208)
Q Consensus 85 ~~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~ 164 (208)
+++.+|+.+++|+|||.+.+ +.+++.+++.+|++|+++.|+..|++++...++++||+.++..|..+++..|.+.|.+
T Consensus 80 v~~~~f~~ll~~~Yt~~~~i--~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~ 157 (256)
T 3hve_A 80 ISVMVMREILDYIFSGQIRL--NEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATE 157 (256)
T ss_dssp CCHHHHHHHHHHHHHSCCCC--C-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHhhccCCCCcc--cHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999999988 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcHHHhhcchhHHH-------HHHhCCchHH----HHHHHHHhccccc
Q 028462 165 FIVENMEEIAFSKEYKQ-------FVRAFPNHSV----RITQAFFMYGSNK 204 (208)
Q Consensus 165 ~i~~~~~~i~~~~~f~~-------~~~~~~~l~v----~i~~~~~~~~~~~ 204 (208)
||.+||.++..+++|.+ .+++++.|+| ++++++++|....
T Consensus 158 ~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~ 208 (256)
T 3hve_A 158 YLETHFRDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD 208 (256)
T ss_dssp HHHHHHHHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-
T ss_pred HHHHHHHHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999987 7888899987 7999999998754
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=1.9e-34 Score=238.96 Aligned_cols=182 Identities=18% Similarity=0.174 Sum_probs=162.2
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecC--CCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPC--YGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP- 84 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~--~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~- 84 (208)
.+...+++++++++++|.+|||+|.+| +|+.|+|||.||+++|+||++||. +++.|+.+..|.++
T Consensus 14 ~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~------------~~~~e~~~~~i~l~~ 81 (279)
T 3i3n_A 14 SHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLS------------GQFSESRSGRVEMRK 81 (279)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCC------------C--------EEECCC
T ss_pred hHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhc------------CCCccccCCeEEecc
Confidence 467889999999999999999999997 489999999999999999999999 89999998999994
Q ss_pred ------cCHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhHHHHHHHHhcCChHHH
Q 028462 85 ------ISREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNALNAFKNAVGCSHRAL 158 (208)
Q Consensus 85 ------~~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L 158 (208)
+++.+|..+++|+|||.+.+ +.+++.+++.+|++|+++.|+..|++++...++++||+.++..|..+++..|
T Consensus 82 ~~~~~~v~~~~f~~ll~~~Ytg~~~i--~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L 159 (279)
T 3i3n_A 82 WSSEPGPEPDTVEAVIEYMYTGRIRV--STGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQL 159 (279)
T ss_dssp CSSTTCSCHHHHHHHHHHHHHSEEEE--ETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHH
T ss_pred ccccCCCCHHHHHHHHHhhCcCCccc--CHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHH
Confidence 78999999999999999987 8899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcHHHhhcchhHHH-------HHHhCCchHH----HHHHHHHhcccc
Q 028462 159 LEAVLDFIVENMEEIAFSKEYKQ-------FVRAFPNHSV----RITQAFFMYGSN 203 (208)
Q Consensus 159 ~~~~~~~i~~~~~~i~~~~~f~~-------~~~~~~~l~v----~i~~~~~~~~~~ 203 (208)
.+.|.+||.+||.++..+++|.+ .+++++.|++ ++++++++|...
T Consensus 160 ~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~ 215 (279)
T 3i3n_A 160 ALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQR 215 (279)
T ss_dssp HHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999998887 6788888876 899999999764
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=214.66 Aligned_cols=154 Identities=21% Similarity=0.271 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHH
Q 028462 10 KCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISRE 88 (208)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~ 88 (208)
+.++..++.++++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.++....|.++ ++++
T Consensus 18 ~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~~Hk~iL~~~S~~F~~~f~------------~~~~e~~~~~i~l~~~~~~ 84 (172)
T 3htm_A 18 ECRLADELGGLWENSRFTDCCLCVA-GQEFQAHKAILAARSPVFSAMFE------------HEMEESKKNRVEINDVEPE 84 (172)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHH------------SCCCGGGTTEEEECSSCHH
T ss_pred HHHHHHHHHHHHhCCCCcceEEEEC-CEEEEeeHHHHHHcCHHHHHHHc------------cCccccCCCeEEecCCCHH
Confidence 3468899999999999999999996 99999999999999999999998 88999999999999 9999
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhHHHHHHHHhcCChHHHHHHHHHHHHh
Q 028462 89 ELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNALNAFKNAVGCSHRALLEAVLDFIVE 168 (208)
Q Consensus 89 ~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~ 168 (208)
+|+.+|+|+|+|.+.+ +.+++.+++.+|++|+++.|+..|+++|...++++||+.++..|..+++..|.+.|.+||.+
T Consensus 85 ~f~~~l~~~Yt~~~~~--~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~ 162 (172)
T 3htm_A 85 VFKEMMCFIYTGKAPN--LDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINY 162 (172)
T ss_dssp HHHHHHHHHHHSCCTT--GGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCC--cHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999987 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHhhcchh
Q 028462 169 NMEEIAFSKE 178 (208)
Q Consensus 169 ~~~~i~~~~~ 178 (208)
||.++..+++
T Consensus 163 ~~~~v~~s~~ 172 (172)
T 3htm_A 163 HATDVLETSG 172 (172)
T ss_dssp TC--------
T ss_pred HHHHHHcCCC
Confidence 9999987653
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.97 E-value=1.5e-30 Score=218.62 Aligned_cols=153 Identities=22% Similarity=0.274 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHH
Q 028462 10 KCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISRE 88 (208)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~ 88 (208)
++++..++.+++.++.+|||+|.++ |++|+|||.||+++|+||++||. +++.|+....|.++ +++.
T Consensus 158 ~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~~Hk~vLaa~S~~F~~~f~------------~~~~e~~~~~i~l~~~~~~ 224 (312)
T 3hqi_A 158 ECRLADELGGLWENSRFTDCCLCVA-GQEFQAHKAILAARSPVFSAMFE------------HEMEESKKNRVEINDVEPE 224 (312)
T ss_dssp CCCHHHHHHHHHHTTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHTT------------C-----CCSEEEECSSCHH
T ss_pred CchHHHHHHHHHhCCCCCceEEEEC-CEEEeHHHHHHHHcCHHHHHHhc------------cCccccCCceEEecCCCHH
Confidence 4578899999999999999999996 99999999999999999999999 89999999999999 9999
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhHHHHHHHHhcCChHHHHHHHHHHHHh
Q 028462 89 ELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNALNAFKNAVGCSHRALLEAVLDFIVE 168 (208)
Q Consensus 89 ~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~ 168 (208)
+|+.+|+|+|||.+.+ +..++.+|+.+|++|+++.|+..|+++|...++.+||+.++..|..|++..|.+.|.+||..
T Consensus 225 ~f~~~L~~iYt~~~~~--~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 225 VFKEMMCFIYTGKAPN--LDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHHHHHHHHSCCTT--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCC--hHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999987 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHhhcch
Q 028462 169 NMEEIAFSK 177 (208)
Q Consensus 169 ~~~~i~~~~ 177 (208)
|+.++..++
T Consensus 303 ~~~~v~~s~ 311 (312)
T 3hqi_A 303 HATDVLETS 311 (312)
T ss_dssp TC-------
T ss_pred HHHHHhhCC
Confidence 999998765
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.96 E-value=3.5e-30 Score=193.16 Aligned_cols=136 Identities=22% Similarity=0.271 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHH
Q 028462 10 KCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISRE 88 (208)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~ 88 (208)
++++..++..+++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.++....|.++ ++++
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~~Hk~iL~~~S~~F~~~f~------------~~~~e~~~~~i~l~~~~~~ 75 (145)
T 4eoz_A 9 ECRLADELGGLWENSRFTDCCLCVA-GQEFQAHKAILAARSPVFSAMFE------------HEMEESKKNRVEINDVEPE 75 (145)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHH------------SSSHHHHHTEEEECSSCHH
T ss_pred hHHHHHHHHHHHhCCCCcceEEEEC-CEEEEeehHHHHHcCHHHHHHHc------------CCCcCCCCceEEecCCCHH
Confidence 3568999999999999999999996 99999999999999999999998 88888888899999 9999
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhHHHHHHHHhcCChHHHHH
Q 028462 89 ELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNALNAFKNAVGCSHRALLE 160 (208)
Q Consensus 89 ~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~ 160 (208)
+|+.+++|+|||.+.+ +.+++.+++.+|++|+++.|+..|+++|...++++||+.++..|..|++..|++
T Consensus 76 ~~~~~l~~~Y~~~~~~--~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 76 VFKEMMCFIYTGKAPN--LDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHHHHHHHHSCCTT--GGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHHHHhhccCccCC--cHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 9999999999999987 889999999999999999999999999999999999999999999999988864
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.94 E-value=4.9e-27 Score=171.00 Aligned_cols=112 Identities=23% Similarity=0.354 Sum_probs=102.4
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cC
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-IS 86 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~ 86 (208)
.+..++++.+.++++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.|+....|.++ ++
T Consensus 7 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~vLaa~S~~F~~~f~------------~~~~e~~~~~i~l~~~~ 73 (120)
T 2if5_A 7 DHSSDILSGLNEQRTQGLLCDVVILVE-GREFPTHRSVLAACSQYFKKLFT------------SGAVVDQQNVYEIDFVS 73 (120)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHH------------C-----CCSEEECCSSC
T ss_pred chHHHHHHHHHHHHhcCCCCCeEEEEC-CEEEeHHHHHHHHhCHHHHHHhc------------CCccccCCceEEeCCCC
Confidence 467789999999999999999999996 99999999999999999999998 88999988999999 99
Q ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 028462 87 REELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHI 134 (208)
Q Consensus 87 ~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 134 (208)
+++|+.+++|+|||.+.+ +.+++.+++.+|++|+++.|+..|+++|
T Consensus 74 ~~~f~~ll~~~Yt~~~~~--~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 74 AEALTALMDFAYTATLTV--STANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHHHHHHHSCCCC--CGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcc--CHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 999999999999999988 8899999999999999999999999987
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.94 E-value=1.6e-26 Score=169.99 Aligned_cols=113 Identities=23% Similarity=0.325 Sum_probs=106.6
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEe-e-c
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNL-P-I 85 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l-~-~ 85 (208)
.+...+++++.++++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.| ....|.+ + +
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~iLaa~S~~F~~~f~------------~~~~e-~~~~i~l~~~~ 76 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRDILTDVVIVVS-REQFRAHKTVLMACSGLFYSIFT------------DQLKR-NLSVINLDPEI 76 (127)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHT------------STTTT-TCSEEECCTTS
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEC-CEEEehHHHHHHHhCHHHHHHhc------------CCccC-CCCEEEeCCCC
Confidence 456789999999999999999999996 89999999999999999999998 88888 7789999 7 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHh
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILS 136 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 136 (208)
++++|+.+|+|+|||.+.+ +.+++.+++.+|++|+++.|++.|+++|.+
T Consensus 77 ~~~~f~~ll~~~Ytg~~~~--~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 77 NPEGFNILLDFMYTSRLNL--REGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp CHHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCcCc--CHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999999999999988 889999999999999999999999999975
No 8
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.93 E-value=8.5e-27 Score=173.97 Aligned_cols=119 Identities=17% Similarity=0.200 Sum_probs=109.8
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee--c
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP--I 85 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~--~ 85 (208)
.+...+++++.++++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.+. ..|.++ +
T Consensus 18 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~------------~~~~e~--~~i~l~~~v 82 (138)
T 2z8h_A 18 VHSTNVLLSLNDQRKKDVLCDVTVLVE-GQRFRAHRSVLAACSSYFHSRIV------------GQTDAE--LTVTLPEEV 82 (138)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHT------------TCCCTT--EEEECCTTS
T ss_pred chHHHHHHHHHHHHhhCCCcCeEEEEC-CEEEechHHHHHHcCHHHHHHHh------------cCCCCC--ceEEeCCCC
Confidence 456789999999999999999999996 99999999999999999999998 777664 578884 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhH
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNA 143 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~ 143 (208)
++++|+.+|+|+|||.+.+ +.+++.+++.+|++|+++.|+..|+++|...++.+|+
T Consensus 83 ~~~~~~~lL~~~Ytg~~~i--~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sna 138 (138)
T 2z8h_A 83 TVKGFEPLIQFAYTAKLIL--SKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDSTS 138 (138)
T ss_dssp CHHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCCC
T ss_pred CHHHHHHHHHHhcCCCccc--CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccccC
Confidence 9999999999999999988 8899999999999999999999999999999988773
No 9
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=168.27 Aligned_cols=111 Identities=23% Similarity=0.229 Sum_probs=102.0
Q ss_pred HHhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-c
Q 028462 7 MRMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-I 85 (208)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~ 85 (208)
..+..++++++.+++++|.+|||++.++ |++|+|||.||+++|+||++||. +++ ...|.++ +
T Consensus 5 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~------------~~~----~~~i~l~~~ 67 (119)
T 3b84_A 5 VQHSVRVLQELNKQREKGQYCDATLDVG-GLVFKAHWSVLACCSHFFQSLYG------------DGS----GGSVVLPAG 67 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHT------------TTT----CCCEEECGG
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEEeeHHHHhhcCHHHHHHHC------------CCC----CCeEEeCCC
Confidence 3567889999999999999999999996 99999999999999999999998 555 4689999 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHh
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILS 136 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 136 (208)
++++|+.+|+|+|||.+.+ +.+++.+++.+|++|+++.|++.|+++|.+
T Consensus 68 ~~~~f~~ll~~iYtg~~~~--~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 68 FAEIFGLLLDFFYTGHLAL--TSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp GHHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred CHHHHHHHHHHHcCCCCcc--CHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999999988 889999999999999999999999999864
No 10
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.93 E-value=1.7e-26 Score=165.25 Aligned_cols=104 Identities=18% Similarity=0.315 Sum_probs=92.4
Q ss_pred HhhcCCCCceEEecCCC---CcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHHHHHHHHH
Q 028462 20 SLREQTPPDIHLRPCYG---PPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISREELEALLD 95 (208)
Q Consensus 20 l~~~~~~~Dv~~~~~~~---~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~~~~~~l~ 95 (208)
+++++.+|||+|.+++| +.|+|||.||+++|+||++||. +++.|+. ..|.++ +++++|+.+|+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~------------~~~~e~~-~~i~l~~~~~~~f~~~l~ 68 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFY------------GDLAEVK-SEIHIPDVEPAAFLILLK 68 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------------------C-CEEEETTSCHHHHHHHHH
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhc------------CCcccCC-CeEEeCCCCHHHHHHHHH
Confidence 67899999999999854 8999999999999999999999 8898888 899999 99999999999
Q ss_pred HHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcC
Q 028462 96 FLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSL 138 (208)
Q Consensus 96 ~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 138 (208)
|+|||.+.+ +.+++.+++.+|++|+++.|+..|+++|.+++
T Consensus 69 ~iYt~~~~~--~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 69 YMYSDEIDL--EADTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HHHHCCCCC--CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHcCCCccC--CHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 999999988 88999999999999999999999999998653
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.93 E-value=9.7e-26 Score=164.52 Aligned_cols=110 Identities=18% Similarity=0.242 Sum_probs=102.2
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cC
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-IS 86 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~ 86 (208)
.+...+.+.++++++++.+|||++.++ |+.|+|||.||+++|+||++||. ++ ...|.++ ++
T Consensus 10 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~------------~~-----~~~i~l~~~~ 71 (121)
T 1buo_A 10 SHPTGLLCKANQMRLAGTLCDVVIMVD-SQEFHAHRTVLACTSKMFEILFH------------RN-----SQHYTLDFLS 71 (121)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEEES-SCEEEECHHHHHHHCHHHHHHTT------------SC-----CSEEEECSSC
T ss_pred chHHHHHHHHHHHHhcCCCCCEEEEEC-CEEEehhHHHHhhcCHHHHHHHc------------CC-----CcEEEeCCCC
Confidence 457789999999999999999999996 99999999999999999999998 42 4589999 99
Q ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhc
Q 028462 87 REELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSS 137 (208)
Q Consensus 87 ~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 137 (208)
+++|+.+++|+|||.+.+ +.+++.+++.+|++|+++.|+..|+++|.+.
T Consensus 72 ~~~f~~ll~~~Ytg~~~~--~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 72 PKTFQQILEYAYTATLQA--KAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHHHHHHHHSCCCC--CGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCcCC--CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 999999999999999988 8899999999999999999999999999753
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.93 E-value=3.7e-26 Score=169.94 Aligned_cols=116 Identities=22% Similarity=0.188 Sum_probs=100.5
Q ss_pred HHhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-c
Q 028462 7 MRMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-I 85 (208)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~ 85 (208)
..+...+++.++++++++.+|||+|.++ |++|+|||.||+++|+||++||. +++ ...|.++ +
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~mf~------------~~~----~~~i~l~~~ 68 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKGQYCDATLDVG-GLVFKAHWSVLACCSHFFQRIYG------------DGT----GGSVVLPAG 68 (135)
T ss_dssp -CHHHHHHHHHHHHHHTTTTCCEEEEET-TEEEEECHHHHHHHCHHHHHTCC--------------------CCEEECGG
T ss_pred ccHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEehHHHHHHHhCHHHHHHHc------------CCC----CCeEEeCCC
Confidence 4567789999999999999999999996 99999999999999999999998 655 4579999 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChh
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPS 141 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~ 141 (208)
++++|+.+|+|+|||.+.+ +.+++.+|+.+|++|+++.|++.|+++|.+.+...
T Consensus 69 ~~~~f~~lL~fiYtg~~~i--~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 69 FAEIFGLLLDFFYTGHLAL--TSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp GHHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 9999999999999999988 88999999999999999999999999998876543
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.92 E-value=2.6e-26 Score=172.66 Aligned_cols=112 Identities=21% Similarity=0.273 Sum_probs=100.4
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCC--CCCceEEee-
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASS--CETEIVNLP- 84 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e--~~~~~i~l~- 84 (208)
.....+++++.++++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.+ +....|.++
T Consensus 29 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~mf~------------~~~~e~e~~~~~I~l~~ 95 (144)
T 2ppi_A 29 QHAARLLRALSSFREESRFCDAHLVLD-GEEIPVQKNILAAASPYIRTKLN------------YNPPKDDGSTYKIELEG 95 (144)
T ss_dssp THHHHHHHHHHHTTC--CCCCEEEEET-TEEEEECHHHHHHHCHHHHHHHH------------HCC-----CCCEEECCS
T ss_pred chHHHHHHHHHHHHhcCCCcceEEEEC-CEEEehHHHHHHHcCHHHHHHHc------------CCCccccCCCcEEEeCC
Confidence 456789999999999999999999996 99999999999999999999998 77765 567789999
Q ss_pred cCHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 028462 85 ISREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHI 134 (208)
Q Consensus 85 ~~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 134 (208)
+++.+|+.+|+|+|||.+.+ +.+++.+|+.+|++|+++.|++.|+++|
T Consensus 96 v~~~~f~~lL~fiYtg~~~i--~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 96 ISVMVMREILDYIFSGQIRL--NEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp SCHHHHHHHHHHHTTSCCCC--CTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 99999999999999999987 8899999999999999999999999886
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=1.8e-25 Score=161.83 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=100.1
Q ss_pred HHhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee--
Q 028462 7 MRMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-- 84 (208)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-- 84 (208)
..+...+++++++++++|.+|||+|.++ |+.|+|||.||+++|+||++||. ++ .+..|.++
T Consensus 3 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~vLaa~S~yF~~~f~------------~~----~~~~i~l~~~ 65 (116)
T 2vpk_A 3 SHHCEHLLERLNKQREAGFLCDCTIVIG-EFQFKAHRNVLASFSEYFGAIYR------------ST----SENNVFLDQS 65 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHT------------TC----CCSCEECCTT
T ss_pred hhHHHHHHHHHHHHHhcCCCCcEEEEEC-CEEEeccHHHHhhcCHHHHHHHc------------CC----CCCeEEeecC
Confidence 3567889999999999999999999996 99999999999999999999998 54 23455555
Q ss_pred -cCHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 028462 85 -ISREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHIL 135 (208)
Q Consensus 85 -~~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 135 (208)
+++++|+.+++|+|||.+.+ +.+++.+++.+|++|+++.|++.|+++|.
T Consensus 66 ~~~~~~f~~ll~~~Yt~~~~~--~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 66 QVKADGFQKLLEFIYTGTLNL--DSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp TCCHHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHcCCCccc--CHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 89999999999999999988 88999999999999999999999999985
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.92 E-value=1.4e-25 Score=163.26 Aligned_cols=109 Identities=18% Similarity=0.166 Sum_probs=100.8
Q ss_pred HHhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-c
Q 028462 7 MRMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-I 85 (208)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~ 85 (208)
..+...+++.++++++++.+|||++.++ |+.|+|||.||+++|+||++||. + ....|.++ +
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~vLaa~S~yF~~~f~------------~-----~~~~i~l~~~ 69 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVVD-GVHFKAHKAVLAACSEYFKMLFV------------D-----QKDVVHLDIS 69 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHCHHHHHHHH------------H-----CCSGGGGGGC
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEehhHHHHHHcCHHHHHHHc------------C-----CCCEEEeCCC
Confidence 4667889999999999999999999996 89999999999999999999997 3 23467888 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHIL 135 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 135 (208)
++++|+.+|+|+|||.+.+ +.+++.+++.+|++|+++.|++.|++++.
T Consensus 70 ~~~~f~~ll~~~Ytg~~~i--~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 70 NAAGLGQVLEFMYTAKLSL--SPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CHHHHHHHHHHHHHSCCCC--CTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCCcc--CHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999988 88999999999999999999999999985
No 16
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.90 E-value=8.1e-26 Score=165.67 Aligned_cols=111 Identities=16% Similarity=0.186 Sum_probs=99.5
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEe-e-c
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNL-P-I 85 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l-~-~ 85 (208)
.+..+++++++++++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.++ ..|.+ . +
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~aHk~vLaa~S~yF~~mf~------------~~~~e~--~~i~l~~~v 75 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDVLCDVTIFVE-GQRFRAHRSVLAACSSYFHSRIV------------GQADGE--LNITLPEEV 75 (124)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHBHHHHHHHT------------TC---C--EEEECCTTS
T ss_pred chHHHHHHHHHHHHhcCCCcCEEEEEC-CEEEecHHHHHHHcCHHHHHHHc------------CCCCCC--ceEeecCCc
Confidence 356789999999999999999999996 99999999999999999999998 777654 57888 4 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHIL 135 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 135 (208)
++++|+.+|+|+|||.+.+ +.+++.+++.+|++|+++.|++.|+++|.
T Consensus 76 ~~~~f~~lL~~iYtg~~~i--~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 76 TVKGFEPLIQFAYTAKLIL--SKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp CHHHHHHHHHHHHHSEEEE--ETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CHHHHHHHHHHhcCCCccc--CHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999999999999999987 88999999999999999999999998864
No 17
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.90 E-value=1.1e-25 Score=164.93 Aligned_cols=110 Identities=21% Similarity=0.239 Sum_probs=101.0
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee--c
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP--I 85 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~--~ 85 (208)
.+..++++.++++++++.+|||+|.++ |+.|+|||.||+++|+||++||. +++.+ ...|.++ +
T Consensus 14 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~~f~------------~~~~e--~~~i~l~~~~ 78 (125)
T 3ohu_A 14 VHCTNILLGLNDQRKKDILCDVTLIVE-RKEFRAHRAVLAACSEYFWQALV------------GQTKN--DLVVSLPEEV 78 (125)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEET-TEEEEECHHHHHHHBHHHHHHHT------------TCCCS--SCEEECCTTC
T ss_pred HHHHHHHHHHHHHHhcCCccceEEEEC-CEEEechHHHHHHcCHHHHHHhc------------CCCCC--CcEEEeCCCC
Confidence 456789999999999999999999996 99999999999999999999998 77766 5678887 8
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHI 134 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 134 (208)
++.+|+.+|+|+|||.+.+ +.+++.+++.+|++|+++.|++.|+++|
T Consensus 79 ~~~~f~~~l~~iYtg~~~~--~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 79 TARGFGPLLQFAYTAKLLL--SRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp CHHHHHHHHHHHTTSEEEE--CTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred CHHHHHHHHHhHcCCceEE--CHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9999999999999999987 8899999999999999999999997653
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.90 E-value=4.8e-25 Score=162.56 Aligned_cols=111 Identities=21% Similarity=0.280 Sum_probs=95.6
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee--c
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP--I 85 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~--~ 85 (208)
.....+++.++++++++.+|||+|.++ |+.|+|||.||+++|+||++||. ++ ....|.++ +
T Consensus 15 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~-~~~~~~Hk~vLaa~S~~F~~~f~------------~~----~~~~i~l~~~~ 77 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQGLYCDVSVVVK-GHAFKAHRAVLAASSSYFRDLFN------------NS----RSAVVELPAAV 77 (129)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEET-TEEEEECHHHHHHHBHHHHHHHH------------HC----CCSEEECCTTC
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEEC-CEEEEehHHHHHHcCHHHHHHHc------------CC----CCCEEEECCCC
Confidence 456789999999999999999999996 99999999999999999999997 44 45689994 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhc
Q 028462 86 SREELEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSS 137 (208)
Q Consensus 86 ~~~~~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 137 (208)
++++|+.+++|+|||.+.+ +.+++.+++.+|++|+++.|++.|+++|...
T Consensus 78 ~~~~f~~ll~~iYtg~~~i--~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 78 QPQSFQQILSFCYTGRLSM--NVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp CHHHHHHHHHHHHHSEEEC--CTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred CHHHHHHHHHHHhCCcccc--CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999987 8899999999999999999999999998753
No 19
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.89 E-value=3.8e-23 Score=149.80 Aligned_cols=101 Identities=17% Similarity=0.256 Sum_probs=93.3
Q ss_pred HhHHHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cC
Q 028462 8 RMKCEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-IS 86 (208)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~ 86 (208)
.....+++.++++++++.+|||++.++ |+.|+|||.||+++|+||++||. ++ ...|.++ ++
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~~F~~~f~------------~~-----~~~i~l~~~~ 74 (116)
T 3fkc_A 13 QYSGSLLNSLNEQRGHGLFCDVTVIVE-DRKFRAHKNILSASSTYFHQLFS------------VA-----GQVVELSFIR 74 (116)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEEET-TEEEEECHHHHHHHCHHHHHHTT------------SC-----CSEEEECSSC
T ss_pred cHHHHHHHHHHHHHhcCCceeEEEEEC-CEEEehhHHHHHHcCHHHHHHHc------------CC-----CCEEEeCCCC
Confidence 456789999999999999999999996 99999999999999999999998 43 4689999 99
Q ss_pred HHHHHHHHHHHhcCCC-CCcccHHHHHHHHHHHHhcChHHHHH
Q 028462 87 REELEALLDFLYHGSL-DPERTEKHIAVLFFSAWNFDILYLSE 128 (208)
Q Consensus 87 ~~~~~~~l~~iYtg~i-~~~~~~~~~~~ll~~A~~~~~~~l~~ 128 (208)
+.+|+.+++|+|||.+ .+ +.+++.+++.+|++|+++.|++
T Consensus 75 ~~~f~~~l~~~Ytg~~~~~--~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 75 AEIFAEILNYIYSSKIVRV--RSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHHHHTTSCCCSC--CHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHHHhhcCCCcCCC--CHHHHHHHHHHHHHhCccccCc
Confidence 9999999999999999 56 9999999999999999999875
No 20
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.87 E-value=1.5e-22 Score=147.31 Aligned_cols=100 Identities=20% Similarity=0.142 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhcCCCCceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHHH
Q 028462 11 CEFLDGFDASLREQTPPDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISREE 89 (208)
Q Consensus 11 ~~~~~~~~~l~~~~~~~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~~ 89 (208)
..+++.++ +.++.+|||+|.++ |+.|+|||.||+++|+||++ . ...|.++ +++++
T Consensus 17 ~~~l~~l~--r~~~~~~Dv~l~v~-~~~f~aHk~vLaa~S~yF~~--~-------------------~~~i~l~~v~~~~ 72 (119)
T 3m5b_A 17 DRLVQLAA--RLRPALCDTLITVG-SQEFPAHSLVLAGVSQQLGR--R-------------------GQWALGEGISPST 72 (119)
T ss_dssp CHHHHHHH--HHTTTTCCEEEEET-TEEEEECHHHHHTTCGGGCC--C-------------------EEEECCSSCCHHH
T ss_pred HHHHHHHH--HhcCCCcceEEEEC-CEEEeeEHHHHHHcCHHHhc--C-------------------CCEEEeCCCCHHH
Confidence 45556664 67899999999996 99999999999999999975 1 2478899 99999
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHh
Q 028462 90 LEALLDFLYHGSLDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILS 136 (208)
Q Consensus 90 ~~~~l~~iYtg~i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 136 (208)
|+.+|+|+|||.+.+ +.+++.+++.+|++|+++.|++.|++.+.+
T Consensus 73 f~~ll~fiYtg~~~i--~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 73 FAQLLNFVYGESVEL--QPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHTTCCEEE--CGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCcCc--CHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999999999999987 999999999999999999999999998764
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.60 E-value=1.9e-15 Score=115.02 Aligned_cols=104 Identities=16% Similarity=0.200 Sum_probs=86.7
Q ss_pred eEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhc-CCC-CCCCceEEee-cCHHHHHHHHHHHhcCC----
Q 028462 29 IHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSL-GAS-SCETEIVNLP-ISREELEALLDFLYHGS---- 101 (208)
Q Consensus 29 v~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~-~~~-e~~~~~i~l~-~~~~~~~~~l~~iYtg~---- 101 (208)
|++...||..|.+|+.+ +..|+||++||. + ++. |+.+..|.|+ +++.++..+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~------------~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~ 69 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLE------------DLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPP 69 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTT------------SSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHH------------hcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCC
Confidence 78888889999999999 889999999998 5 666 6667789999 99999999999999987
Q ss_pred ----------------------CCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhHHHHH
Q 028462 102 ----------------------LDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNALNAF 147 (208)
Q Consensus 102 ----------------------i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~ 147 (208)
+.+ +..++.+|+.+|++|+++.|.++|++++...++..++-.+.
T Consensus 70 ~~~~~~~~~~~~~~i~~wD~~F~~i--d~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir 135 (159)
T 2ast_A 70 PPEDDENKEKRTDDIPVWDQEFLKV--DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 135 (159)
T ss_dssp -----------CCCCCHHHHHHTCS--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred CcccccccccchhhhhHHHHHHHcC--CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 555 88999999999999999999999999998876555443333
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.37 E-value=5.3e-13 Score=93.23 Aligned_cols=80 Identities=15% Similarity=0.080 Sum_probs=65.8
Q ss_pred eEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhc--CCCCCCCceEEee-cCHHHHHHHHHHHh-----c-
Q 028462 29 IHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSL--GASSCETEIVNLP-ISREELEALLDFLY-----H- 99 (208)
Q Consensus 29 v~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~--~~~e~~~~~i~l~-~~~~~~~~~l~~iY-----t- 99 (208)
|+++..||.+|.+||.+ +..|+||++||. + ++.|+....|.|+ +++.+++.+++|+| +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~------------~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~ 70 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLS------------GPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTN 70 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHC------------CC--------CEEECTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHH------------hCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCC
Confidence 67888889999999999 999999999998 4 5667777899999 99999999999999 4
Q ss_pred --CCCC---CcccHHHHHHHHHHHHhcCh
Q 028462 100 --GSLD---PERTEKHIAVLFFSAWNFDI 123 (208)
Q Consensus 100 --g~i~---~~~~~~~~~~ll~~A~~~~~ 123 (208)
+.++ + +.+++.+|+.+|++|++
T Consensus 71 ~~~~i~~~~i--~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 71 SSTEIPEFPI--APEIALELLMAANFLDC 97 (97)
T ss_dssp CCSCCCCCCC--CGGGHHHHHHHHHHHTC
T ss_pred CcCCCCcCcC--CHHHHHHHHHHHhhhCC
Confidence 5665 5 88999999999999873
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.27 E-value=3.7e-12 Score=94.91 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=84.6
Q ss_pred eEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHHHHHHHHHHHhcCC------
Q 028462 29 IHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISREELEALLDFLYHGS------ 101 (208)
Q Consensus 29 v~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~~~~~~l~~iYtg~------ 101 (208)
|++...||..|.+|+.+ +..|.++++|+. +.. ...|.|+ ++..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~------------~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~ 66 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLE------------DLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPP 66 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHH------------HTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHH------------hcC----CCceecCCcCHHHHHHHHHHHHHhccCCCcc
Confidence 78888899999999998 789999999997 321 3479999 99999999999999855
Q ss_pred --------------------CCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhhHHHH
Q 028462 102 --------------------LDPERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSNALNA 146 (208)
Q Consensus 102 --------------------i~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~ 146 (208)
+.+ +..++.+|+.+|++++++.|.++|++++...++..+.-.+
T Consensus 67 ~~~~~~~~~~~~i~~wD~~F~~v--d~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eei 129 (141)
T 1fs1_B 67 EDDENKEKRTDDIPVWDQEFLKV--DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEI 129 (141)
T ss_dssp --------------HHHHHHTCS--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred ccccccccchhhhhHHHHHHHhC--CHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 444 7889999999999999999999999999887766665443
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.24 E-value=4.1e-12 Score=96.60 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=59.7
Q ss_pred ceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHHHHHHHHHHHhcCCCC---
Q 028462 28 DIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISREELEALLDFLYHGSLD--- 103 (208)
Q Consensus 28 Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~~~~~~l~~iYtg~i~--- 103 (208)
-|++...||..|.+|+.+ +..|.+|++||. +.. ....|.|+ +++.++..+++|+|+..-.
T Consensus 5 ~v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~------------~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~ 68 (160)
T 2p1m_A 5 KIVLKSSDGESFEVEEAV-ALESQTIAHMVE------------DDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAAS 68 (160)
T ss_dssp ---CCC---------CHH-HHTCTTTC---------------------------CCTTSCHHHHHHHHHC----------
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHH------------ccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCc
Confidence 477888789999999998 789999999998 432 23479999 9999999999999986521
Q ss_pred ----------------------CcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcC---ChhhHHHHHHHHhcCC
Q 028462 104 ----------------------PERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSL---KPSNALNAFKNAVGCS 154 (208)
Q Consensus 104 ----------------------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~~~~a~~~~ 154 (208)
+..+..++.+|+.+|++|+++.|.++|++++...+ +++.+-.++.....+.
T Consensus 69 ~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 69 KAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp --------------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCC
T ss_pred ccccccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 12367788999999999999999999999999988 5555555554444443
No 25
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.70 E-value=3.5e-08 Score=75.40 Aligned_cols=103 Identities=12% Similarity=0.150 Sum_probs=78.9
Q ss_pred CceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCC----CCCCceEEee-cCHHHHHHHHHHHhcCC
Q 028462 27 PDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGAS----SCETEIVNLP-ISREELEALLDFLYHGS 101 (208)
Q Consensus 27 ~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~----e~~~~~i~l~-~~~~~~~~~l~~iYtg~ 101 (208)
.-|+++..||..|.+++.+ +..|..++.|+. .... +.....|.|+ ++..++..+++|++.-.
T Consensus 7 ~~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~------------~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~ 73 (169)
T 3v7d_A 7 SNVVLVSGEGERFTVDKKI-AERSLLLKNYLN------------DMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHR 73 (169)
T ss_dssp CEEEEECTTCCEEEEEHHH-HTTSHHHHHHHH------------C-----------CEEECTTCCHHHHHHHHHHHHHTT
T ss_pred CeEEEEeCCCCEEEecHHH-HHHhHHHHHHHH------------hcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcc
Confidence 4688999999999999998 678999999986 2221 1233689999 99999999999997632
Q ss_pred CC-----------------------CcccHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCChhh
Q 028462 102 LD-----------------------PERTEKHIAVLFFSAWNFDILYLSEFCAHHILSSLKPSN 142 (208)
Q Consensus 102 i~-----------------------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 142 (208)
-. +..+...+.+|+.+|++|+++.|.++|++.+...++..+
T Consensus 74 ~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgkt 137 (169)
T 3v7d_A 74 DSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRS 137 (169)
T ss_dssp TCCCCC--------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCcccccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCC
Confidence 11 123667889999999999999999999999866554433
No 26
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.64 E-value=1.8e-08 Score=70.26 Aligned_cols=80 Identities=13% Similarity=0.018 Sum_probs=67.2
Q ss_pred ceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHHHHHHHHHHHhcCC-----
Q 028462 28 DIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISREELEALLDFLYHGS----- 101 (208)
Q Consensus 28 Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~~~~~~l~~iYtg~----- 101 (208)
-|++...||..|.+++.+ +..|.+++.|+. +++ +.....|.|+ ++..+++.+++|+|.-.
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~------------~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~ 70 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIE------------GPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGV 70 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHH------------SST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHh------------ccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCC
Confidence 478888899999999997 789999999997 555 5555689999 99999999999997622
Q ss_pred ---------CCCcccHHHHHHHHHHHHhcCh
Q 028462 102 ---------LDPERTEKHIAVLFFSAWNFDI 123 (208)
Q Consensus 102 ---------i~~~~~~~~~~~ll~~A~~~~~ 123 (208)
+.+ +...+.+|+.+|+++++
T Consensus 71 ~~~~~~i~~w~v--d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 71 SEDDDEIPEFEI--PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CSSCSSCCCCCC--CHHHHHHHHHHHHHHCC
T ss_pred ccccccCCCccC--CHHHHHHHHHHHHHhCc
Confidence 333 78899999999999875
No 27
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=3.1e-08 Score=69.73 Aligned_cols=69 Identities=16% Similarity=0.046 Sum_probs=57.6
Q ss_pred HhcCChhhHHHHHHHHhcCChHHHHHHHHHHHHhcHHHhhcchhHHH-------HHHhCCc-hHHHHHHHHHhcccc
Q 028462 135 LSSLKPSNALNAFKNAVGCSHRALLEAVLDFIVENMEEIAFSKEYKQ-------FVRAFPN-HSVRITQAFFMYGSN 203 (208)
Q Consensus 135 ~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~i~~~~~f~~-------~~~~~~~-l~v~i~~~~~~~~~~ 203 (208)
...++++||+.++.+|..|++..|.+.|.+||.+||.++..+++|.+ .+++++- =..++++++++|...
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sdv~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWINF 81 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTCEETTSCHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCCCCCHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999999999988 4444441 012789999998653
No 28
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.57 E-value=2.2e-08 Score=69.42 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=62.8
Q ss_pred eEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhc-CC-CCCCCceEEee-cCHHHHHHHHHHHhcCC----
Q 028462 29 IHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSL-GA-SSCETEIVNLP-ISREELEALLDFLYHGS---- 101 (208)
Q Consensus 29 v~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~-~~-~e~~~~~i~l~-~~~~~~~~~l~~iYtg~---- 101 (208)
|++...||.+|.+++.+ +..|.+++.|+. + +. .|.....|.|+ ++..+++.+++|+|...
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~------------~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~ 69 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLS------------GPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTN 69 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHH------------CC--------CEEECSSCCHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHH------------ccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCC
Confidence 67888899999999997 789999999997 3 22 45556789999 99999999999997622
Q ss_pred -------CCCcccHHHHHHHHHHHHhcCh
Q 028462 102 -------LDPERTEKHIAVLFFSAWNFDI 123 (208)
Q Consensus 102 -------i~~~~~~~~~~~ll~~A~~~~~ 123 (208)
+.+ +.+.+.+|+.+|+++++
T Consensus 70 ~~~~i~~w~v--d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 70 SSTEIPEFPI--APEIALELLMAANFLDC 96 (96)
T ss_dssp CCSCCCCCCC--CTTTHHHHHHHHHHHTC
T ss_pred CcccCCCccc--CHHHHHHHHHHHHHhCc
Confidence 333 77889999999999875
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.29 E-value=1.2e-06 Score=61.87 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=73.5
Q ss_pred ceEEecCCCCcchHHHHHHhhcC-hHhhCCCCCChHHHHHhhhhcCC----CCCCCceEEeecCHHHHHHHHHHHhcCCC
Q 028462 28 DIHLRPCYGPPLPAHKAVLYARS-TILVHPPPTFDAQLMRKYWSLGA----SSCETEIVNLPISREELEALLDFLYHGSL 102 (208)
Q Consensus 28 Dv~~~~~~~~~i~aHk~iL~~~S-~yF~~~f~~~~~~~~~~~~~~~~----~e~~~~~i~l~~~~~~~~~~l~~iYtg~i 102 (208)
-|++.|| |+.|...+..|+... .+|..||. ++. .......+-+.-+|..|+.+|.|+.+|.+
T Consensus 7 ~v~LNVG-G~~f~t~~~TL~~~p~s~L~~~~~------------~~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l 73 (107)
T 3drz_A 7 WVRLNVG-GTYFLTTRQTLCRDPKSFLYRLCQ------------ADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKL 73 (107)
T ss_dssp EEEEEET-TEEEEEEHHHHTSSTTSHHHHHHT------------TCGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCC
T ss_pred EEEEEEC-CEEEEECHHHHhcCCCcchhHHHh------------cCCCCCcCCCCCceEEecCChHHHHHHHHHhCCCee
Confidence 4788997 999999999998875 46777775 221 01123456666999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHh
Q 028462 103 DPERTEKHIAVLFFSAWNFDILYLSEFCAHHILS 136 (208)
Q Consensus 103 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 136 (208)
..+ ..-....++.-|.+|+++.|...|.+.|..
T Consensus 74 ~~p-~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 74 VIN-KDLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp CCC-TTSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 763 223457899999999999999999988753
No 30
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.19 E-value=1.6e-06 Score=61.61 Aligned_cols=84 Identities=14% Similarity=0.037 Sum_probs=63.4
Q ss_pred CceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEee-cCHHHHHHHHHHHhcCC----
Q 028462 27 PDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLP-ISREELEALLDFLYHGS---- 101 (208)
Q Consensus 27 ~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~-~~~~~~~~~l~~iYtg~---- 101 (208)
.-|++...||.+|.+.+.+ +..|..++.|+.. .+.+.+.....|.|+ ++..+++.+++|++...
T Consensus 17 ~~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~----------~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~ 85 (112)
T 1vcb_B 17 MYVKLISSDGHEFIVKREH-ALTSGTIKAMLSG----------PGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTN 85 (112)
T ss_dssp CEEEEECTTSCEEEEEHHH-HHTSHHHHHHSSC----------C--------CEEECSSCCHHHHHHHHHHHHHHHHHSS
T ss_pred CEEEEEcCCCCEEEECHHH-HHHhHHHHHHHHh----------cCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccC
Confidence 3588888899999999995 5789999999971 012235445689999 99999999999996521
Q ss_pred -------CCCcccHHHHHHHHHHHHhcCh
Q 028462 102 -------LDPERTEKHIAVLFFSAWNFDI 123 (208)
Q Consensus 102 -------i~~~~~~~~~~~ll~~A~~~~~ 123 (208)
+.+ +...+.+|+.+|+++++
T Consensus 86 ~~~~i~~w~v--d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 86 SSTEIPEFPI--APEIALELLMAANFLDC 112 (112)
T ss_dssp CSSCCCCCCC--CHHHHHHHHHHHHHHTC
T ss_pred CcCCCCCccc--CHHHHHHHHHHHHHhCc
Confidence 334 78899999999999875
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.25 E-value=0.00015 Score=56.42 Aligned_cols=95 Identities=16% Similarity=0.123 Sum_probs=71.1
Q ss_pred ceEEecCCCCcchHHHHHHhhcC-hHhhCCCCCChHHHHHhhhhcC--CC--CCCCceEEeecCHHHHHHHHHHHhcCCC
Q 028462 28 DIHLRPCYGPPLPAHKAVLYARS-TILVHPPPTFDAQLMRKYWSLG--AS--SCETEIVNLPISREELEALLDFLYHGSL 102 (208)
Q Consensus 28 Dv~~~~~~~~~i~aHk~iL~~~S-~yF~~~f~~~~~~~~~~~~~~~--~~--e~~~~~i~l~~~~~~~~~~l~~iYtg~i 102 (208)
=|+|.|| |..|...+..|.... .+|..||. +. +. ......+-++-+|..|+.+|.|+-+|.+
T Consensus 13 ~V~LNVG-G~~F~Tt~sTL~r~PdS~L~~lfs------------~~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~L 79 (202)
T 3drx_A 13 WVRLNVG-GTYFLTTRQTLCRDPKSFLYRLCQ------------ADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKL 79 (202)
T ss_dssp EEEEEET-TEEEEEETTGGGSCTTSSTHHHHS------------CCCC----BCTTCCEEECSCSTTHHHHHHHHHHSCC
T ss_pred EEEEEEC-CEEEEEeHHHHhCCCcchHHHHhc------------CccccCcccCCCccEEecCChHHHHHHHHHhcCCcc
Confidence 4778997 999999999998754 35666654 22 11 1123456666899999999999999999
Q ss_pred CCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHh
Q 028462 103 DPERTEKHIAVLFFSAWNFDILYLSEFCAHHILS 136 (208)
Q Consensus 103 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 136 (208)
.++ ..-....++.-|.+|+++.|...|.+.+..
T Consensus 80 ~lP-~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 80 VIN-KDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp CCC-TTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 863 223446799999999999999999998854
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.30 E-value=0.0013 Score=46.63 Aligned_cols=96 Identities=9% Similarity=-0.084 Sum_probs=68.1
Q ss_pred ceEEecCCCCcchHHHHHHhhcC-hHhhCCCCCChHHHHHhhhhcCC-CCCCCceEEeecCHHHHHHHHHHHhcCCCCCc
Q 028462 28 DIHLRPCYGPPLPAHKAVLYARS-TILVHPPPTFDAQLMRKYWSLGA-SSCETEIVNLPISREELEALLDFLYHGSLDPE 105 (208)
Q Consensus 28 Dv~~~~~~~~~i~aHk~iL~~~S-~yF~~~f~~~~~~~~~~~~~~~~-~e~~~~~i~l~~~~~~~~~~l~~iYtg~i~~~ 105 (208)
=|++.|| |..|...+..|.... ..+..|+. +.. .......+-+.-+|..|+.+|.|+-+|.+..+
T Consensus 6 ~V~LNVG-G~~f~T~~~TL~~~P~s~L~~l~~------------~~~~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~~p 72 (115)
T 3kvt_A 6 RVIINVG-GIRHETYKATLKKIPATRLSRLTE------------GMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLHYP 72 (115)
T ss_dssp EEEEEET-TEEEEEEHHHHTTSCSSTTTTCCT------------TSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBCCC
T ss_pred EEEEEEC-CEEEEecHHHHhcCCCccHHHHhc------------CCCCCCCCCCcEEEecChHHHHHHHHHhcCCCCCCC
Confidence 4788998 999999999998764 35666665 211 11234466666899999999999999999763
Q ss_pred ccHHHHHHHHHHHHhcChHHHHHH--HHHHHHhc
Q 028462 106 RTEKHIAVLFFSAWNFDILYLSEF--CAHHILSS 137 (208)
Q Consensus 106 ~~~~~~~~ll~~A~~~~~~~l~~~--c~~~l~~~ 137 (208)
.+ ..+..++.-|.+|+++...-. |.....+.
T Consensus 73 ~~-~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 73 TD-VCGPLFEEELEFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp SS-SCHHHHHHHHHHHTCCGGGBCGGGSHHHHSC
T ss_pred Cc-ccHHHHHHHHHHhCCChHHHHHHHHHHHHhc
Confidence 22 356789999999999875432 44444433
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.20 E-value=0.0095 Score=42.70 Aligned_cols=88 Identities=15% Similarity=-0.007 Sum_probs=62.4
Q ss_pred CceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEeecCHHHHHHHHHHHhcCCCCCcc
Q 028462 27 PDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLPISREELEALLDFLYHGSLDPER 106 (208)
Q Consensus 27 ~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~~~~~~~~~~l~~iYtg~i~~~~ 106 (208)
.=|++.|| |..|...+..|.... .+++.. .. ...........+-+.-+|..|+.+|.|+-+|.+..+
T Consensus 13 ~~V~LNVG-G~~F~t~~~TL~~~p---~S~L~~-------~~-~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~p- 79 (124)
T 1s1g_A 13 ELIVLNVS-GRRFQTWRTTLERYP---DTLLGS-------TE-KEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYP- 79 (124)
T ss_dssp CEEEEEET-TEEEEEEHHHHTTST---TSSTTS-------SG-GGGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCCC-
T ss_pred CEEEEEeC-CEEEEEeHHHHhcCC---Cceecc-------cC-CcccccCCCCcEEEcCChHHHHHHHHHHhcCCCCCC-
Confidence 35888997 999999999997643 344541 00 001112233456666899999999999999999763
Q ss_pred cHHHHHHHHHHHHhcChHHHH
Q 028462 107 TEKHIAVLFFSAWNFDILYLS 127 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~ 127 (208)
....+..++.-|++|+++.+.
T Consensus 80 ~~~~~~~l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 80 RYECISAYDDELAFYGILPEI 100 (124)
T ss_dssp TTSCHHHHHHHHHHTTCCGGG
T ss_pred CCcCHHHHHHHHHHcCCChHH
Confidence 223678899999999999874
No 34
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.49 E-value=0.019 Score=39.54 Aligned_cols=87 Identities=11% Similarity=-0.011 Sum_probs=60.4
Q ss_pred eEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEeecCHHHHHHHHHHHhc-CCCCCccc
Q 028462 29 IHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLPISREELEALLDFLYH-GSLDPERT 107 (208)
Q Consensus 29 v~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~~~~~~~~~~l~~iYt-g~i~~~~~ 107 (208)
|++.|| |..|...+..|... -.+|+.. + ..+ ..........+-+.-+|..|+.+|.|+-+ |.+..+.+
T Consensus 3 v~LNVG-G~~f~t~~~TL~~~---p~s~L~~-~--~~~----~~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~~p~~ 71 (100)
T 1t1d_A 3 VVINVS-GLRFETQLKTLNQF---PDTLLGN-P--QKR----NRYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPVN 71 (100)
T ss_dssp EEEEET-TEEEEEEHHHHHTS---TTSTTTC-H--HHH----GGGEETTTTEEEECSCSTTHHHHHHHHHTTSCCCCCTT
T ss_pred EEEEEC-CEEEEeeHHHHhcC---CCccccc-h--hcc----ccccCCCceeEEEcCChHHHHHHHHHHhcCCcccCCCC
Confidence 678997 99999999999654 2445541 0 000 01111233466666899999999999998 89876323
Q ss_pred HHHHHHHHHHHHhcChHHHH
Q 028462 108 EKHIAVLFFSAWNFDILYLS 127 (208)
Q Consensus 108 ~~~~~~ll~~A~~~~~~~l~ 127 (208)
..+..+..-|.+|+++.+.
T Consensus 72 -~~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 72 -VPLDVFSEEIKFYELGENA 90 (100)
T ss_dssp -SCHHHHHHHHHHTTCCHHH
T ss_pred -CCHHHHHHHHHHcCCCHHH
Confidence 3678899999999998755
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.25 E-value=0.007 Score=42.09 Aligned_cols=86 Identities=14% Similarity=0.029 Sum_probs=60.7
Q ss_pred eEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEeecCHHHHHHHHHHHhcCCCCCcccH
Q 028462 29 IHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLPISREELEALLDFLYHGSLDPERTE 108 (208)
Q Consensus 29 v~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~~~~~~~~~~l~~iYtg~i~~~~~~ 108 (208)
|++.|| |..|...+..|.... .+|+.. ..+ ..........+-+.-+|..|+.+|.|+-+|.+..+ ..
T Consensus 2 V~LNVG-G~~f~t~~~TL~~~p---~s~L~~-----~~~---~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~p-~~ 68 (105)
T 1nn7_A 2 IVLNVS-GTRFQTWQDTLERYP---DTLLGS-----SER---DFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYP-RH 68 (105)
T ss_dssp EEEEET-TEEEEECHHHHHTSC---SSSTTS-----GGG---GGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCC-TT
T ss_pred EEEEEC-CEEEEEeHHHHhcCC---Cccccc-----cCC---cccccCCCCcEEEeCCcHHHHHHHHHHhcCCCCCC-CC
Confidence 678997 999999999997654 345541 000 00111223456666899999999999999998753 22
Q ss_pred HHHHHHHHHHHhcChHHHH
Q 028462 109 KHIAVLFFSAWNFDILYLS 127 (208)
Q Consensus 109 ~~~~~ll~~A~~~~~~~l~ 127 (208)
..+..+..-|++|+++.+.
T Consensus 69 ~~~~~l~~Ea~fy~i~~l~ 87 (105)
T 1nn7_A 69 ECISAYDEELAFFGLIPEI 87 (105)
T ss_dssp SCHHHHHHHHHHHTCCSCC
T ss_pred cCHHHHHHHHHHcCCCHHH
Confidence 3578899999999998763
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=95.16 E-value=0.022 Score=41.64 Aligned_cols=88 Identities=15% Similarity=-0.007 Sum_probs=62.6
Q ss_pred CceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEeecCHHHHHHHHHHHhcCCCCCcc
Q 028462 27 PDIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLPISREELEALLDFLYHGSLDPER 106 (208)
Q Consensus 27 ~Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~~~~~~~~~~l~~iYtg~i~~~~ 106 (208)
.=|++.|| |..|...+..|.... .+|+.. .. ...........+-+.-++..|+.+|.|+-+|.+..+
T Consensus 35 ~~V~LNVG-G~~F~T~~~TL~~~P---~S~L~~-------~~-~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~l~~p- 101 (140)
T 2nz0_B 35 ELIVLNVS-GRRFQTWRTTLERYP---DTLLGS-------TE-KEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYP- 101 (140)
T ss_dssp CEEEEEET-TEEEEEEHHHHHTCT---TSTTTS-------GG-GGGSEETTTTEEEECSCHHHHHHHHHHHHHSSBCCC-
T ss_pred CEEEEEEC-CEEEEeeHHHHhcCC---Ceeecc-------cC-CcccccCCCCeEEEeCCcHHHHHHHHHHhcCCcCCC-
Confidence 35888997 999999999997643 445541 00 001112233466666899999999999999998863
Q ss_pred cHHHHHHHHHHHHhcChHHHH
Q 028462 107 TEKHIAVLFFSAWNFDILYLS 127 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~ 127 (208)
....+..++.-|++|+++.+.
T Consensus 102 ~~~~~~~l~eEa~fy~i~~l~ 122 (140)
T 2nz0_B 102 RYECISAYDDELAFYGILPEI 122 (140)
T ss_dssp TTSCHHHHHHHHHHHTCCGGG
T ss_pred CCcCHHHHHHHHHHcCCChHH
Confidence 223578899999999998863
No 37
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.89 E-value=0.64 Score=31.71 Aligned_cols=64 Identities=14% Similarity=-0.029 Sum_probs=45.3
Q ss_pred cHHHHHHHHHHHHhcChHHHHHHHHHHHHhcC------------ChhhHHHHHHHHhcCChHHHHHHHHHHHHhcHH
Q 028462 107 TEKHIAVLFFSAWNFDILYLSEFCAHHILSSL------------KPSNALNAFKNAVGCSHRALLEAVLDFIVENME 171 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l------------~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 171 (208)
+..|..+++.+|+.|+++.|...|.+|+..+. ..+....++.- ...+-..+.+++.+|+..+..
T Consensus 9 ~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d~~ 84 (105)
T 2eqx_A 9 QVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFNKE 84 (105)
T ss_dssp CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcCHH
Confidence 77899999999999999999999999997653 22333333332 122334577888888766643
No 38
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=84.04 E-value=1.2 Score=30.04 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=30.3
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHHHhc
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFIVEN 169 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 169 (208)
.++++|+..++..|..+++..|.+.|.+|+.++
T Consensus 76 ~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 367899999999999999999999999999875
No 39
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=80.52 E-value=2.8 Score=36.92 Aligned_cols=88 Identities=8% Similarity=0.024 Sum_probs=60.6
Q ss_pred ceEEecCCCCcchHHHHHHhhcChHhhCCCCCChHHHHHhhhhcCCCCCCCceEEeecCHHHHHHHHHHHhc-CCCCCcc
Q 028462 28 DIHLRPCYGPPLPAHKAVLYARSTILVHPPPTFDAQLMRKYWSLGASSCETEIVNLPISREELEALLDFLYH-GSLDPER 106 (208)
Q Consensus 28 Dv~~~~~~~~~i~aHk~iL~~~S~yF~~~f~~~~~~~~~~~~~~~~~e~~~~~i~l~~~~~~~~~~l~~iYt-g~i~~~~ 106 (208)
=|++.|| |..|...+..|.... .+++.. ..+. .........++-++-+|..|+.+|.|+.+ |.+..+
T Consensus 53 ~v~lNVg-G~~f~t~~~tL~~~p---~s~l~~----~~~~---~~~~~~~~~~~f~DR~~~~F~~IL~~~r~~g~l~~p- 120 (514)
T 2r9r_B 53 RVVINIS-GLRFETQLKTLAQFP---ETLLGD----PKKR---MRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRP- 120 (514)
T ss_dssp EEEEEET-TEEEEEEHHHHTTST---TSTTTC----HHHH---GGGEETTTTEEEECSCHHHHHHHHHHHHHTSCCCCC-
T ss_pred EEEEEeC-CEEEEecHHHHhcCC---CCcccc----cccC---CcccCCCCCCEEEcCChHHHHHHHHHHhcCCccccC-
Confidence 4778997 999999999997542 444441 0000 11112233466667899999999999999 998753
Q ss_pred cHHHHHHHHHHHHhcChHHHH
Q 028462 107 TEKHIAVLFFSAWNFDILYLS 127 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~ 127 (208)
..-....+..-|++|+++.+.
T Consensus 121 ~~~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 121 VNVPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp TTSCHHHHHHHHHHTTCCHHH
T ss_pred CcccHHHHHHHHHhcCCCHHH
Confidence 233566788899999998754
No 40
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=77.60 E-value=6.5 Score=27.09 Aligned_cols=32 Identities=16% Similarity=0.275 Sum_probs=29.6
Q ss_pred CChhhHHHHHHHHhcCChHHHHHHHHHHHHhc
Q 028462 138 LKPSNALNAFKNAVGCSHRALLEAVLDFIVEN 169 (208)
Q Consensus 138 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 169 (208)
++.+|+..++..|..++...|.+.|.+|+.++
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 67889999999999999999999999999765
No 41
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=77.02 E-value=2.2 Score=31.10 Aligned_cols=33 Identities=12% Similarity=-0.062 Sum_probs=29.2
Q ss_pred cHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCC
Q 028462 107 TEKHIAVLFFSAWNFDILYLSEFCAHHILSSLK 139 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 139 (208)
+.+++..++.+|..|+++.|+..|.+++..++.
T Consensus 133 ~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 133 SVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 567999999999999999999999999987643
No 42
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=72.04 E-value=4.3 Score=28.57 Aligned_cols=36 Identities=14% Similarity=0.041 Sum_probs=29.2
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHHHhcHHH
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFIVENMEE 172 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~ 172 (208)
.++.+|+..++..|..++...|.+.|.+|+.+++..
T Consensus 86 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 467899999999999999999999999999888754
No 43
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=71.25 E-value=9.3 Score=25.76 Aligned_cols=30 Identities=10% Similarity=-0.091 Sum_probs=27.9
Q ss_pred CChhhHHHHHHHHhcCChHHHHHHHHHHHH
Q 028462 138 LKPSNALNAFKNAVGCSHRALLEAVLDFIV 167 (208)
Q Consensus 138 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 167 (208)
++.+|+..++..|..++...|.+.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678899999999999999999999999875
No 44
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=69.46 E-value=4.8 Score=27.56 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=28.5
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHHH
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFIV 167 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 167 (208)
.++.+|+..++..|..++...|.+.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 4678899999999999999999999999975
No 45
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=66.77 E-value=4.6 Score=32.55 Aligned_cols=33 Identities=12% Similarity=-0.062 Sum_probs=29.2
Q ss_pred cHHHHHHHHHHHHhcChHHHHHHHHHHHHhcCC
Q 028462 107 TEKHIAVLFFSAWNFDILYLSEFCAHHILSSLK 139 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 139 (208)
+.+++..++.+|+.|+++.|+..|.++|..++.
T Consensus 273 ~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 273 SVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 557999999999999999999999999987643
No 46
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=66.36 E-value=3.3 Score=28.40 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=27.5
Q ss_pred CChhhHHHHHHHHhcCChHHHHHHHHHHHHhc
Q 028462 138 LKPSNALNAFKNAVGCSHRALLEAVLDFIVEN 169 (208)
Q Consensus 138 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 169 (208)
++.+|+..++..|..++...|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 67889999999999999999999999998764
No 47
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=65.49 E-value=7.9 Score=26.28 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=27.1
Q ss_pred CChhhHHHHHHHHhcCChHHHHHHHHHHH
Q 028462 138 LKPSNALNAFKNAVGCSHRALLEAVLDFI 166 (208)
Q Consensus 138 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i 166 (208)
++.+|+..++..|..++...|.+.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 67889999999999999999999999986
No 48
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=65.35 E-value=16 Score=24.82 Aligned_cols=32 Identities=16% Similarity=0.029 Sum_probs=29.1
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHHHh
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFIVE 168 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~ 168 (208)
.++++|+..++..|..++...|.+.|.+|+.+
T Consensus 88 ~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp CCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999865
No 49
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=60.94 E-value=2.8 Score=29.58 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=31.4
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHHHhcHH
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFIVENME 171 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 171 (208)
.++.+|+..++..|..+++..|.+.|.+|+..++.
T Consensus 100 ~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 36789999999999999999999999999987653
No 50
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=51.99 E-value=7.2 Score=27.75 Aligned_cols=30 Identities=13% Similarity=0.080 Sum_probs=27.2
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHH
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFI 166 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i 166 (208)
.++.+|+..++..|..++...|.+.|.+|+
T Consensus 114 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 367889999999999999999999999875
No 51
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=49.86 E-value=8 Score=27.02 Aligned_cols=33 Identities=15% Similarity=-0.016 Sum_probs=26.2
Q ss_pred CChhhHHHHHHHHhcCChHHHHHHHHHHHHhcH
Q 028462 138 LKPSNALNAFKNAVGCSHRALLEAVLDFIVENM 170 (208)
Q Consensus 138 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~ 170 (208)
++.+++..++..|..++...|.+.|.+++.++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 567889999999999999999999999998764
No 52
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=47.74 E-value=15 Score=29.03 Aligned_cols=65 Identities=17% Similarity=0.100 Sum_probs=45.5
Q ss_pred cHHHHHHHHHHHHhcChHHHHHHHHHHHHhcC------------ChhhHHHHHHHHhc--CChHHHHHHHHHHHHhcHH
Q 028462 107 TEKHIAVLFFSAWNFDILYLSEFCAHHILSSL------------KPSNALNAFKNAVG--CSHRALLEAVLDFIVENME 171 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l------------~~~n~~~~~~~a~~--~~~~~L~~~~~~~i~~~~~ 171 (208)
+..|+..++..|+.|+++.|...|.+++..+. ..+....++.--.. .+-..+.+++..|+..+..
T Consensus 140 ~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~ 218 (279)
T 3i3n_A 140 HLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAE 218 (279)
T ss_dssp CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHH
T ss_pred CcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHH
Confidence 56789999999999999999999999987542 22222233222111 2356788999999987643
No 53
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=46.43 E-value=15 Score=25.18 Aligned_cols=32 Identities=19% Similarity=0.093 Sum_probs=27.6
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHHHh
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFIVE 168 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~ 168 (208)
.++.+|+..++..|..++...|.+.|.+++..
T Consensus 86 ~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 46789999999999999999999999998653
No 54
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=46.39 E-value=27 Score=25.22 Aligned_cols=63 Identities=5% Similarity=0.001 Sum_probs=46.4
Q ss_pred cHHHHHHHHHHHHhcCh---------------HHHHHHHHHHHHhcCChhhHHHHHHHHhcCChHHHHHHHHHHHHhcHH
Q 028462 107 TEKHIAVLFFSAWNFDI---------------LYLSEFCAHHILSSLKPSNALNAFKNAVGCSHRALLEAVLDFIVENME 171 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~---------------~~l~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 171 (208)
+..-+..++..+.+..- ..+.....+|+ .++.++++.++..|...+...|.+.|-++++....
T Consensus 50 ~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 50 NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp CHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 44556667777765541 12233445555 38999999999999999999999999999987654
No 55
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=46.10 E-value=11 Score=29.27 Aligned_cols=31 Identities=3% Similarity=-0.050 Sum_probs=27.3
Q ss_pred cHHHHHHHHHHHHhcChHHHHHHHHHHHHhc
Q 028462 107 TEKHIAVLFFSAWNFDILYLSEFCAHHILSS 137 (208)
Q Consensus 107 ~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 137 (208)
+.+|+..++..|+.|+++.|...|.+++..+
T Consensus 132 ~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 162 (256)
T 3hve_A 132 AAENCIGIRDFALHYCLHHVHYLATEYLETH 162 (256)
T ss_dssp CSSTTHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 4468999999999999999999999988653
No 56
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=41.87 E-value=68 Score=22.59 Aligned_cols=82 Identities=6% Similarity=0.020 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhcCCCCC-cccHHHHHHHHHHHHhcCh---------------HHHHHHHHHHHHhcCChhhHHHHHHHHh
Q 028462 88 EELEALLDFLYHGSLDP-ERTEKHIAVLFFSAWNFDI---------------LYLSEFCAHHILSSLKPSNALNAFKNAV 151 (208)
Q Consensus 88 ~~~~~~l~~iYtg~i~~-~~~~~~~~~ll~~A~~~~~---------------~~l~~~c~~~l~~~l~~~n~~~~~~~a~ 151 (208)
..++.++.-.-.+.+++ ..+..-+..++..+.+..- ..+...-.+|+ .++.++++.++..|.
T Consensus 25 ~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AAn 102 (141)
T 1fs1_B 25 VTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAAN 102 (141)
T ss_dssp HHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHHH
Confidence 34555554321233432 2355566778888766551 22333444455 389999999999999
Q ss_pred cCChHHHHHHHHHHHHhcHH
Q 028462 152 GCSHRALLEAVLDFIVENME 171 (208)
Q Consensus 152 ~~~~~~L~~~~~~~i~~~~~ 171 (208)
..+...|.+.|-++++....
T Consensus 103 yL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 103 YLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp HHTCHHHHHHHHHHHHHHHT
T ss_pred HHhhhHHHHHHHHHHHHHHc
Confidence 99999999999999987654
No 57
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=37.98 E-value=11 Score=26.04 Aligned_cols=33 Identities=12% Similarity=0.061 Sum_probs=23.4
Q ss_pred cCChhhHHHHHHHHhcCChHHHHHHHHHHHHhc
Q 028462 137 SLKPSNALNAFKNAVGCSHRALLEAVLDFIVEN 169 (208)
Q Consensus 137 ~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 169 (208)
.++.+|+..++..|..++...|.+.|.+|+.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 478899999999999999999999999998764
Done!