Query 028463
Match_columns 208
No_of_seqs 235 out of 1692
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 19:46:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028463.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028463hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.9 1.4E-25 4.9E-30 180.1 13.4 95 109-205 57-160 (161)
2 1gme_A Heat shock protein 16.9 99.9 9E-25 3.1E-29 174.1 14.9 100 107-208 42-150 (151)
3 3aab_A Putative uncharacterize 99.9 9.5E-25 3.2E-29 168.0 9.0 108 87-197 4-118 (123)
4 3gla_A Low molecular weight he 99.9 7.7E-24 2.6E-28 157.0 13.6 90 106-196 2-99 (100)
5 4fei_A Heat shock protein-rela 99.9 2.1E-23 7.2E-28 155.7 14.3 91 106-197 4-97 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 7.9E-23 2.7E-27 153.9 13.0 96 110-206 4-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.5E-22 5.2E-27 151.0 11.5 96 110-207 3-100 (101)
8 3q9p_A Heat shock protein beta 99.9 5.4E-22 1.9E-26 143.6 11.2 82 113-195 2-85 (85)
9 2klr_A Alpha-crystallin B chai 99.9 1.5E-21 5E-26 159.3 10.0 97 110-207 65-163 (175)
10 2bol_A TSP36, small heat shock 99.9 7.7E-21 2.6E-25 167.6 15.1 118 85-205 71-197 (314)
11 2y1y_A Alpha-crystallin B chai 99.8 1.5E-20 5.1E-25 137.3 11.1 83 114-197 2-86 (90)
12 2bol_A TSP36, small heat shock 99.8 3.8E-18 1.3E-22 150.4 11.2 86 109-195 221-314 (314)
13 2xcm_C SGT1-like protein, cyto 99.0 1.2E-09 4.1E-14 78.6 9.1 81 108-196 2-82 (92)
14 1rl1_A Suppressor of G2 allele 99.0 1.6E-09 5.3E-14 81.4 9.8 82 107-196 8-89 (114)
15 3eud_A Protein SHQ1; CS domain 98.5 9.5E-07 3.3E-11 66.7 10.5 80 107-198 16-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.4 2.6E-07 8.9E-12 71.8 5.7 79 107-197 2-84 (134)
17 3igf_A ALL4481 protein; two-do 98.3 1.9E-06 6.5E-11 77.3 9.6 73 108-194 297-369 (374)
18 1x5m_A Calcyclin-binding prote 98.0 0.00013 4.4E-09 55.6 11.7 80 109-196 21-104 (127)
19 1wgv_A KIAA1068 protein; CS do 97.8 0.00023 8E-09 53.9 11.5 83 106-196 17-102 (124)
20 1wfi_A Nuclear distribution ge 97.8 0.00023 8E-09 54.3 11.4 81 105-196 4-88 (131)
21 3qor_A Nuclear migration prote 97.7 0.0004 1.4E-08 52.5 11.1 81 105-196 13-97 (121)
22 1ejf_A Progesterone receptor P 97.7 0.00024 8.2E-09 54.0 9.8 78 110-196 5-82 (125)
23 1wh0_A Ubiquitin carboxyl-term 97.7 0.00019 6.4E-09 55.5 9.0 87 108-195 19-111 (134)
24 2o30_A Nuclear movement protei 97.5 0.00083 2.8E-08 51.3 10.1 76 108-195 4-80 (131)
25 2rh0_A NUDC domain-containing 97.5 0.0014 4.8E-08 51.8 11.0 78 107-196 12-91 (157)
26 2kmw_A Uncharacterized protein 97.3 0.00076 2.6E-08 53.0 7.7 78 108-196 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.2 0.00019 6.5E-09 55.3 3.1 84 108-195 6-97 (134)
28 4eld_A MJ16.5-P1, small heat s 78.1 15 0.0005 28.2 8.9 30 164-195 70-99 (161)
29 4fei_A Heat shock protein-rela 76.0 9.5 0.00032 26.9 6.8 33 120-152 63-96 (102)
30 3gla_A Low molecular weight he 74.2 15 0.0005 25.5 7.4 34 161-196 15-48 (100)
31 3q9p_A Heat shock protein beta 69.8 11 0.00037 25.8 5.6 33 161-195 8-40 (85)
32 3aab_A Putative uncharacterize 61.8 35 0.0012 24.7 7.4 33 162-196 36-69 (123)
33 2cql_A OK/SW-CL.103, 60S ribos 60.8 22 0.00076 25.4 6.0 45 131-193 20-68 (100)
34 1gme_A Heat shock protein 16.9 56.5 50 0.0017 24.9 7.8 43 133-196 45-88 (151)
35 2y1y_A Alpha-crystallin B chai 55.9 21 0.00072 24.4 5.0 32 161-194 7-38 (90)
36 3l1e_A Alpha-crystallin A chai 53.4 25 0.00087 24.9 5.3 32 161-194 13-44 (106)
37 2wj5_A Heat shock protein beta 53.4 36 0.0012 23.8 6.0 33 161-195 12-44 (101)
38 1vq8_E 50S ribosomal protein L 50.6 15 0.00052 29.1 4.0 46 131-194 9-55 (178)
39 1rl6_A Protein (ribosomal prot 50.0 47 0.0016 26.2 6.8 45 131-193 11-55 (177)
40 2nwt_A UPF0165 protein AF_2212 46.0 13 0.00046 25.1 2.5 15 176-190 3-17 (69)
41 1nkw_E 50S ribosomal protein L 44.6 26 0.00088 28.6 4.5 46 131-194 39-84 (212)
42 1rl1_A Suppressor of G2 allele 43.2 31 0.0011 24.4 4.4 35 117-151 53-88 (114)
43 3v2d_H 50S ribosomal protein L 42.8 41 0.0014 26.6 5.4 44 131-192 12-55 (180)
44 2klr_A Alpha-crystallin B chai 39.4 48 0.0017 25.8 5.3 32 161-194 74-105 (175)
45 3iz5_F 60S ribosomal protein L 38.8 87 0.003 24.9 6.8 46 131-193 13-60 (190)
46 3j21_F 50S ribosomal protein L 38.6 27 0.00093 27.8 3.7 50 121-192 8-58 (184)
47 2xcm_C SGT1-like protein, cyto 38.3 26 0.00088 23.6 3.1 35 117-151 46-81 (92)
48 3jx8_A Putative lipoprotein; s 35.0 95 0.0033 25.0 6.7 31 118-148 41-71 (250)
49 3u5e_H L8, RP24, YL11, 60S rib 30.5 1.8E+02 0.0061 23.1 7.3 45 131-193 13-59 (191)
50 1ew4_A CYAY protein; friedreic 30.5 28 0.00095 25.2 2.3 18 176-193 28-45 (106)
51 3bbo_I Ribosomal protein L6; l 28.5 31 0.001 28.4 2.5 46 131-193 54-99 (223)
52 2ks0_A Uncharacterized protein 27.0 31 0.0011 23.3 1.9 22 128-149 17-38 (71)
53 4a17_E RPL9, 60S ribosomal pro 25.9 93 0.0032 24.7 4.8 44 131-192 13-58 (188)
54 3jx8_A Putative lipoprotein; s 25.8 78 0.0027 25.6 4.5 41 108-148 54-106 (250)
55 2zkr_e 60S ribosomal protein L 25.6 1.3E+02 0.0046 23.8 5.8 47 130-193 12-61 (192)
56 3qqz_A Putative uncharacterize 25.3 1.9E+02 0.0064 23.6 6.9 69 120-190 13-86 (255)
57 3ljy_A Putative adhesin; struc 24.6 1.5E+02 0.005 23.8 6.0 78 113-207 6-84 (243)
58 3r8s_G 50S ribosomal protein L 23.3 36 0.0012 26.8 1.9 43 131-191 11-53 (176)
59 3oeq_A Frataxin homolog, mitoc 22.7 57 0.002 24.3 2.8 16 178-193 49-64 (123)
60 3ug3_A Alpha-L-arabinofuranosi 22.4 64 0.0022 29.6 3.7 35 168-208 470-504 (504)
61 2o30_A Nuclear movement protei 21.2 1.2E+02 0.0042 22.0 4.5 29 163-192 17-45 (131)
62 3lyc_A Putative pectinase; str 20.5 1.2E+02 0.004 24.3 4.6 61 132-207 17-83 (241)
63 3t3l_A Frataxin, mitochondrial 20.4 70 0.0024 23.9 2.9 17 176-192 40-56 (129)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=1.4e-25 Score=180.13 Aligned_cols=95 Identities=24% Similarity=0.332 Sum_probs=82.3
Q ss_pred ceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCcc--------ce-eeeEEEEEEECCCCCCCCcceE
Q 028463 109 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG--------EE-SVRRYTSRIDLPEKLYRTDQIK 179 (208)
Q Consensus 109 p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~--------e~-~~~~f~r~i~LP~~v~d~~~Ik 179 (208)
+++||+|++++|+|+++|||++++||+|+++++.|+|+|+++...+. |+ .++.|.|+|.||.+| |.+.|+
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~v-d~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATV-KEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCB-CGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCc-ccccEE
Confidence 34999999999999999999999999999999999999998764321 34 567999999999999 999999
Q ss_pred EEEECCEEEEEEeccCcccCCceeEe
Q 028463 180 AEMKNGVLKVTVPKVKEEERADVFQV 205 (208)
Q Consensus 180 A~~~nGvL~I~lPK~~~~~~~~~i~I 205 (208)
|+|+||||+|++||.++. +++.|+|
T Consensus 136 A~~~nGvL~I~lpK~~~~-~~r~I~I 160 (161)
T 4eld_A 136 AKFENGVLSVILPKAESS-IKKGINI 160 (161)
T ss_dssp EEEETTEEEEEEEBCGGG-SCCCCCC
T ss_pred EEEECCEEEEEEEcCCCC-CCcEeec
Confidence 999999999999997544 4455554
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.92 E-value=9e-25 Score=174.13 Aligned_cols=100 Identities=38% Similarity=0.598 Sum_probs=86.1
Q ss_pred ccceeeEEEcCCeEEEEEEcCCCCccceEEEEE-CCEEEEEeeecccCcc--------ceeeeEEEEEEECCCCCCCCcc
Q 028463 107 LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLE-QNTLVIRGEGGKEGEG--------EESVRRYTSRIDLPEKLYRTDQ 177 (208)
Q Consensus 107 ~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~-~~~L~I~g~~~~~~~~--------e~~~~~f~r~i~LP~~v~d~~~ 177 (208)
+.|++||+|++++|+|.++|||++++||+|+++ ++.|+|+|+++.+.+. |+.++.|.|+|.||.+| +.+.
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~ 120 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDA-KVEE 120 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCC-CGGG
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCc-cccc
Confidence 679999999999999999999999999999995 6899999998765432 33467899999999999 9999
Q ss_pred eEEEEECCEEEEEEeccCcccCCceeEeecC
Q 028463 178 IKAEMKNGVLKVTVPKVKEEERADVFQVKVD 208 (208)
Q Consensus 178 IkA~~~nGvL~I~lPK~~~~~~~~~i~I~IE 208 (208)
|+|+|+||+|+|++||.+++ +++.+.|+|+
T Consensus 121 i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 121 VKAGLENGVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp CEEEEETTEEEEEEECCCCC-TTCCCCCCCC
T ss_pred eEEEEECCEEEEEEEccCcC-CCCCeEeeeC
Confidence 99999999999999998654 3445566653
No 3
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.91 E-value=9.5e-25 Score=168.04 Aligned_cols=108 Identities=20% Similarity=0.242 Sum_probs=82.1
Q ss_pred HHHHHHHhhcCCCCCCCCCCccceeeEEEcCCeEEEEEEcCCCCccceEEEEEC-CEEEEEeeecccCcc-----ceeee
Q 028463 87 VLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQ-NTLVIRGEGGKEGEG-----EESVR 160 (208)
Q Consensus 87 l~~~md~lf~~~~~~~~~~~~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~-~~L~I~g~~~~~~~~-----e~~~~ 160 (208)
|+++|+++|++.+.... ..+.|++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++.+... |+.+
T Consensus 4 ~~~em~~~~~~~~~~~~-~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~- 81 (123)
T 3aab_A 4 LGKELQKRSEELSRGFY-ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK- 81 (123)
T ss_dssp ----------CCCHHHH-HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-
T ss_pred HHHHHHHHHHHHhhhcc-ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-
Confidence 34555555555432111 125689999999999999999999999999999999 999999998765421 2334
Q ss_pred EEEEEEECCCCCCCCcce-EEEEECCEEEEEEeccCcc
Q 028463 161 RYTSRIDLPEKLYRTDQI-KAEMKNGVLKVTVPKVKEE 197 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~I-kA~~~nGvL~I~lPK~~~~ 197 (208)
.|.|+|.||.+| +.++| +|.|+||+|+|++||.++.
T Consensus 82 ~f~R~~~LP~~v-d~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 82 YVRKVIRLPYNV-AKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp EEEEEEECSSEE-CTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred EEEEEEECCCCc-CcchhCeeEEcCCEEEEEEEcCCCC
Confidence 899999999999 99999 9999999999999998543
No 4
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.91 E-value=7.7e-24 Score=156.98 Aligned_cols=90 Identities=30% Similarity=0.488 Sum_probs=80.7
Q ss_pred CccceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCcc--------ceeeeEEEEEEECCCCCCCCcc
Q 028463 106 GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG--------EESVRRYTSRIDLPEKLYRTDQ 177 (208)
Q Consensus 106 ~~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~--------e~~~~~f~r~i~LP~~v~d~~~ 177 (208)
.+.|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+.+. |+.++.|.|+|.||.+| +.+.
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~v-d~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSA-DADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTB-CTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCc-ChHH
Confidence 37899999999999999999999999999999999999999998765432 34567999999999999 9999
Q ss_pred eEEEEECCEEEEEEeccCc
Q 028463 178 IKAEMKNGVLKVTVPKVKE 196 (208)
Q Consensus 178 IkA~~~nGvL~I~lPK~~~ 196 (208)
|+|+|+||+|+|++||.++
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999753
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.91 E-value=2.1e-23 Score=155.69 Aligned_cols=91 Identities=22% Similarity=0.389 Sum_probs=82.6
Q ss_pred CccceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCc---cceeeeEEEEEEECCCCCCCCcceEEEE
Q 028463 106 GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGE---GEESVRRYTSRIDLPEKLYRTDQIKAEM 182 (208)
Q Consensus 106 ~~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~---~e~~~~~f~r~i~LP~~v~d~~~IkA~~ 182 (208)
.+.|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+.. .|+.++.|.|+|.||.+| +.+.|+|+|
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~v-d~~~i~A~~ 82 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPV-RPASGVASL 82 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCB-CTTCCEEEE
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCc-chhHcEEEE
Confidence 4789999999999999999999999999999999999999999865322 256788999999999999 999999999
Q ss_pred ECCEEEEEEeccCcc
Q 028463 183 KNGVLKVTVPKVKEE 197 (208)
Q Consensus 183 ~nGvL~I~lPK~~~~ 197 (208)
+||+|+|++||.++.
T Consensus 83 ~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 83 AGGVLTVRFEKLRPT 97 (102)
T ss_dssp ETTEEEEEEEBSSCC
T ss_pred ECCEEEEEEEccCcc
Confidence 999999999998654
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.89 E-value=7.9e-23 Score=153.89 Aligned_cols=96 Identities=17% Similarity=0.345 Sum_probs=82.6
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCcc-ceeeeEEEEEEECCCCCCCCcceEEEE-ECCEE
Q 028463 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 187 (208)
Q Consensus 110 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~IkA~~-~nGvL 187 (208)
..+|+|++++|+|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.+| |.+.|+|.| +||+|
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNV-DQSALSCSLSADGML 82 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTB-CTTSCEEEECTTSEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEE
Confidence 4799999999999999999999999999999999999997654333 33457899999999999 999999999 89999
Q ss_pred EEEEeccCccc----CCceeEee
Q 028463 188 KVTVPKVKEEE----RADVFQVK 206 (208)
Q Consensus 188 ~I~lPK~~~~~----~~~~i~I~ 206 (208)
+|++||.++.. +++.|+|+
T Consensus 83 ~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 83 TFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEEEccCcccccCCCCeEeeec
Confidence 99999987652 45555553
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.88 E-value=1.5e-22 Score=151.02 Aligned_cols=96 Identities=10% Similarity=0.187 Sum_probs=80.9
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCcc-ceeeeEEEEEEECCCCCCCCcceEEEE-ECCEE
Q 028463 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 187 (208)
Q Consensus 110 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~IkA~~-~nGvL 187 (208)
.+||+|++++|+|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.+| |.+.|+|.| +||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGV-DPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTB-CTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHCEEEECCCCEE
Confidence 4789999999999999999999999999999999999998765433 33456799999999999 999999999 89999
Q ss_pred EEEEeccCcccCCceeEeec
Q 028463 188 KVTVPKVKEEERADVFQVKV 207 (208)
Q Consensus 188 ~I~lPK~~~~~~~~~i~I~I 207 (208)
+|++||..+ .+++.+.|..
T Consensus 82 ~I~lPK~~~-~~~~~~~i~~ 100 (101)
T 2wj5_A 82 SIQATPASA-QASLPSPPAA 100 (101)
T ss_dssp EEEECBCCC-CCSSCC----
T ss_pred EEEEECCCc-CCCCCCcccc
Confidence 999999854 4566776653
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.87 E-value=5.4e-22 Score=143.64 Aligned_cols=82 Identities=21% Similarity=0.378 Sum_probs=70.7
Q ss_pred EEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCcc-ceeeeEEEEEEECCCCCCCCcceEEEEE-CCEEEEE
Q 028463 113 AKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEMK-NGVLKVT 190 (208)
Q Consensus 113 i~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~IkA~~~-nGvL~I~ 190 (208)
+.|++++|+|.++|||++++||+|.++++.|+|+|+++...++ +..++.|.|+|.||.+| |.+.|+|.|+ ||+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~v-d~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGV-DPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTC-CGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChHHcEEEECCCCEEEEE
Confidence 4689999999999999999999999999999999998765432 33468999999999999 9999999998 9999999
Q ss_pred EeccC
Q 028463 191 VPKVK 195 (208)
Q Consensus 191 lPK~~ 195 (208)
+||.+
T Consensus 81 lPK~k 85 (85)
T 3q9p_A 81 APMPK 85 (85)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99963
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.85 E-value=1.5e-21 Score=159.28 Aligned_cols=97 Identities=13% Similarity=0.298 Sum_probs=73.0
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCcc-ceeeeEEEEEEECCCCCCCCcceEEEE-ECCEE
Q 028463 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 187 (208)
Q Consensus 110 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~IkA~~-~nGvL 187 (208)
.+||+|++++|+|.++|||+++|||+|+++++.|+|+|+++...++ +...+.|.|+|.||.+| |.++|+|+| +||||
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~V-d~~~i~A~~s~dGvL 143 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSLSSDGVL 143 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTC-CTTTCEEEECTTSCE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCc-ChhHeEEEEcCCCEE
Confidence 3799999999999999999999999999999999999998765433 33456899999999999 999999999 89999
Q ss_pred EEEEeccCcccCCceeEeec
Q 028463 188 KVTVPKVKEEERADVFQVKV 207 (208)
Q Consensus 188 ~I~lPK~~~~~~~~~i~I~I 207 (208)
+|++||.+++...+.|+|+.
T Consensus 144 ~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 144 TVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp EEEEECC-------------
T ss_pred EEEEECCCCCCCCeEEEEec
Confidence 99999986544346676653
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.85 E-value=7.7e-21 Score=167.63 Aligned_cols=118 Identities=17% Similarity=0.250 Sum_probs=95.5
Q ss_pred HHHHHHHHH-hhcCCCCC---CCCCCccceeeEEEcCC----eEEEEEEcCCCCccceEEEEECCEEEEEeeecccCccc
Q 028463 85 SQVLNFMDQ-MTESPFFS---GTRGGLRRGWDAKETDD----ALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGE 156 (208)
Q Consensus 85 ~~l~~~md~-lf~~~~~~---~~~~~~~p~~di~e~~d----~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e 156 (208)
..++++|++ .+++.... ...+.+.|++||+|+++ +|+|.++|||++++||+|+++++.|+|+|+++.+.+++
T Consensus 71 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~ 150 (314)
T 2bol_A 71 ESVMKEMSAIQPREFHPELEYTQPGELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDA 150 (314)
T ss_dssp HHHHHHHHTCCCEECCTTTSSCSCCTTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCC
T ss_pred hhhhHhhhhhhHHHHhhhccCCccccCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCC
Confidence 345566666 33322211 11123679999999999 99999999999999999999999999999998766666
Q ss_pred eeeeEEEEEEECCCCCCCCcceEEEEE-CCEEEEEEeccCcccCCceeEe
Q 028463 157 ESVRRYTSRIDLPEKLYRTDQIKAEMK-NGVLKVTVPKVKEEERADVFQV 205 (208)
Q Consensus 157 ~~~~~f~r~i~LP~~v~d~~~IkA~~~-nGvL~I~lPK~~~~~~~~~i~I 205 (208)
..++.|.|+|.||.+| +.++|+|+|+ ||||+|++||.+++. +.|.|
T Consensus 151 r~~g~F~R~~~LP~~V-d~e~i~A~~~~nGVL~I~lPK~~~~~--~~I~i 197 (314)
T 2bol_A 151 AMSESVGRSIPLPPSV-DRNHIQATITTDDVLVIEAPVNEPNY--KAIKL 197 (314)
T ss_dssp CBCCCEEEEEECCTTB-CGGGCEEEECSSSEEEEEEEBSSCCT--TTEEE
T ss_pred EEEEEEEEEEECCCCc-cccccEEEEeCCCEEEEEEeccCccc--ceeec
Confidence 7889999999999999 9999999999 999999999986553 34544
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.84 E-value=1.5e-20 Score=137.28 Aligned_cols=83 Identities=17% Similarity=0.368 Sum_probs=68.9
Q ss_pred EEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCcc-ceeeeEEEEEEECCCCCCCCcceEEEE-ECCEEEEEE
Q 028463 114 KETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVLKVTV 191 (208)
Q Consensus 114 ~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~IkA~~-~nGvL~I~l 191 (208)
.+++++|+|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.+| +.+.|+|.| +||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~v-d~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTB-CGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEEEEEE
Confidence 467899999999999999999999999999999998754332 33456899999999999 999999999 899999999
Q ss_pred eccCcc
Q 028463 192 PKVKEE 197 (208)
Q Consensus 192 PK~~~~ 197 (208)
||..+.
T Consensus 81 pK~~~~ 86 (90)
T 2y1y_A 81 PRKQVS 86 (90)
T ss_dssp CBC---
T ss_pred EcCCCC
Confidence 998544
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.75 E-value=3.8e-18 Score=150.42 Aligned_cols=86 Identities=23% Similarity=0.448 Sum_probs=72.1
Q ss_pred ceeeEEEcC---CeEEEEEEc-CCCCccceEEEEECCEEEEEeeecccCcc----ceeeeEEEEEEECCCCCCCCcceEE
Q 028463 109 RGWDAKETD---DALNLSIDM-PGLGKEDVRVSLEQNTLVIRGEGGKEGEG----EESVRRYTSRIDLPEKLYRTDQIKA 180 (208)
Q Consensus 109 p~~di~e~~---d~y~l~vdL-PG~~kedI~V~v~~~~L~I~g~~~~~~~~----e~~~~~f~r~i~LP~~v~d~~~IkA 180 (208)
...+|.+++ ++|+|+++| ||++++||+|++++|.|+|+|+++.+.+. |+.++.|+|+|.||++| |.++|+|
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~i~A 299 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVV-DASKTQA 299 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEE-CGGGCEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCc-ChHHeEE
Confidence 456777765 589999999 99999999999999999999999876544 67889999999999999 9999999
Q ss_pred EEECCEEEEEEeccC
Q 028463 181 EMKNGVLKVTVPKVK 195 (208)
Q Consensus 181 ~~~nGvL~I~lPK~~ 195 (208)
+|+||||+|++||.+
T Consensus 300 ~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 300 EIVDGLMVVEAPLFK 314 (314)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEeCCEEEEEEecCC
Confidence 999999999999973
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.03 E-value=1.2e-09 Score=78.60 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=72.6
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEE
Q 028463 108 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVL 187 (208)
Q Consensus 108 ~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL 187 (208)
.+.++++++.+.+.|.+.+||+.+++++|.+.++.|.|.+.... ...|...+.|+..| +++..++.+.+|.|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~-------~~~y~~~~~L~~~I-~~~~s~~~~~~~~l 73 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG-------EDAYYLQPRLFGKI-IPDKCKYEVLSTKI 73 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT-------SCCEEECCBBSSCB-CGGGCEEEECSSCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC-------CcEEEEeeEcCCcc-CchhEEEEEECCEE
Confidence 46799999999999999999999999999999999999986421 13688889999999 99999999999999
Q ss_pred EEEEeccCc
Q 028463 188 KVTVPKVKE 196 (208)
Q Consensus 188 ~I~lPK~~~ 196 (208)
.|+|+|.++
T Consensus 74 ~i~L~K~~~ 82 (92)
T 2xcm_C 74 EICLAKADI 82 (92)
T ss_dssp EEEEEBSSS
T ss_pred EEEEEcCCC
Confidence 999999754
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.02 E-value=1.6e-09 Score=81.35 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=73.4
Q ss_pred ccceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCE
Q 028463 107 LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 186 (208)
Q Consensus 107 ~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGv 186 (208)
..+.++++++.+.+.|.+.+||+.+++++|.+.++.|.|++.... ...|...+.|+..| +++..++.+.+|.
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~-------~~~y~~~~~L~~~I-~~e~s~~~~~~~~ 79 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS-------GEDYNLKLELLHPI-IPEQSTFKVLSTK 79 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT-------SSEEEEEECBSSCC-CGGGEEEEECSSS
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC-------CcEEEEEeeCCCcC-CccccEEEEECCE
Confidence 356799999999999999999999999999999999999987421 13788999999999 9999999999999
Q ss_pred EEEEEeccCc
Q 028463 187 LKVTVPKVKE 196 (208)
Q Consensus 187 L~I~lPK~~~ 196 (208)
|+|+|+|.++
T Consensus 80 l~i~L~K~~~ 89 (114)
T 1rl1_A 80 IEIKLKKPEA 89 (114)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEEcCCC
Confidence 9999999754
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.52 E-value=9.5e-07 Score=66.70 Aligned_cols=80 Identities=16% Similarity=0.372 Sum_probs=72.6
Q ss_pred ccceeeEEEcCCeEEEEEEcCCCC--ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEE--
Q 028463 107 LRRGWDAKETDDALNLSIDMPGLG--KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEM-- 182 (208)
Q Consensus 107 ~~p~~di~e~~d~y~l~vdLPG~~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~-- 182 (208)
..|.+.|.++++.++|.+.+|-+. ..++++.++++.+..... .|--++.||..|.+.+.-+|+|
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~------------PYyLRL~lP~~vved~~~~A~YD~ 83 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYDS 83 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET------------TEEEEEECSSCEECSTTCEEEEET
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC------------CeEEEEecCcceecCCCcceEEeC
Confidence 679999999999999999999876 789999999999999988 7888999999998778889999
Q ss_pred ECCEEEEEEeccCccc
Q 028463 183 KNGVLKVTVPKVKEEE 198 (208)
Q Consensus 183 ~nGvL~I~lPK~~~~~ 198 (208)
++|.++|++||..+.+
T Consensus 84 d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 84 KDECINVKVAKLNKNE 99 (115)
T ss_dssp TTTEEEEEEEESSTTC
T ss_pred CCcEEEEEEcCCcCCC
Confidence 5999999999986553
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.43 E-value=2.6e-07 Score=71.79 Aligned_cols=79 Identities=15% Similarity=0.361 Sum_probs=71.9
Q ss_pred ccceeeEEEcCCeEEEEEEcCCCC--ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEE--
Q 028463 107 LRRGWDAKETDDALNLSIDMPGLG--KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEM-- 182 (208)
Q Consensus 107 ~~p~~di~e~~d~y~l~vdLPG~~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~-- 182 (208)
..|.+.|.++++.++|.|.+|... ..+++|.+++..+..... .|.-++.||..|.+.+.-+|+|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~------------PYyLRL~LP~~V~e~~~~kA~YD~ 69 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYDS 69 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS------------SSCEEECCSSCEECCSSCEEEEET
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC------------CeEEEecCCCeeecCCCcceeEec
Confidence 468899999999999999999999 899999999999999887 7888899999997888899999
Q ss_pred ECCEEEEEEeccCcc
Q 028463 183 KNGVLKVTVPKVKEE 197 (208)
Q Consensus 183 ~nGvL~I~lPK~~~~ 197 (208)
+.|.|+|++||..+.
T Consensus 70 d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 70 KDECINVKVAKLNKN 84 (134)
T ss_dssp TTTEEEEEEEESSTT
T ss_pred cCCEEEEEEeCCCCC
Confidence 589999999997654
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.33 E-value=1.9e-06 Score=77.28 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=64.6
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEE
Q 028463 108 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVL 187 (208)
Q Consensus 108 ~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL 187 (208)
.+++.|.+. .|.+++.|||+++++|++...++.|+|++. .|.|.|.||..+....-..|+|+||.|
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~g------------~~rR~i~LP~~L~~~~v~~A~~~~~~L 362 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEAG------------DQRRNIFLPPALSGRPITGAKFQNNYL 362 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEET------------TEEEEEECCTTTTTCCEEEEEEETTEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEEC------------CEeecccCCHHHcCCCccccEEECCEE
Confidence 345666444 899999999999999999999999999987 899999999999777788999999999
Q ss_pred EEEEecc
Q 028463 188 KVTVPKV 194 (208)
Q Consensus 188 ~I~lPK~ 194 (208)
+|++-..
T Consensus 363 ~i~~~~~ 369 (374)
T 3igf_A 363 IISFLEH 369 (374)
T ss_dssp EEEECCC
T ss_pred EEEEehh
Confidence 9998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.95 E-value=0.00013 Score=55.59 Aligned_cols=80 Identities=14% Similarity=0.266 Sum_probs=69.3
Q ss_pred ceeeEEEcCCeEEEEEEcCCC---CccceEEEEECCEEEEEeeecccCccceeeeEEEEEEE-CCCCCCCCcceEEEEEC
Q 028463 109 RGWDAKETDDALNLSIDMPGL---GKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRID-LPEKLYRTDQIKAEMKN 184 (208)
Q Consensus 109 p~~di~e~~d~y~l~vdLPG~---~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~-LP~~v~d~~~IkA~~~n 184 (208)
+.+++.++.+.+.|.|.+||+ .++++.|.+..+.|.|.+.... ...|.-.+. |-..| +++.-+..+..
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~-------~~~y~~~~~~L~~~I-~~e~S~~~v~~ 92 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN-------GKSYSMIVNNLLKPI-SVEGSSKKVKT 92 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS-------SSCEEEEEECBSSCC-CTTTCEEEEET
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC-------CCcEEEEhHHhcCcc-CcccCEEEEeC
Confidence 468999999999999999999 8999999999999999875321 126777885 99999 99999999999
Q ss_pred CEEEEEEeccCc
Q 028463 185 GVLKVTVPKVKE 196 (208)
Q Consensus 185 GvL~I~lPK~~~ 196 (208)
+.+.|+|-|..+
T Consensus 93 ~kVei~L~K~~~ 104 (127)
T 1x5m_A 93 DTVLILCRKKVE 104 (127)
T ss_dssp TEEEEEEECSSS
T ss_pred CEEEEEEEECCC
Confidence 999999999754
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.85 E-value=0.00023 Score=53.89 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=68.8
Q ss_pred CccceeeEEEcCCeEEEEEEcC-CC-CccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEE
Q 028463 106 GLRRGWDAKETDDALNLSIDMP-GL-GKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMK 183 (208)
Q Consensus 106 ~~~p~~di~e~~d~y~l~vdLP-G~-~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~ 183 (208)
+..+.+.+.++.+.+.|.|.|| |+ +.++|+|.+..+.|.|....... ..+.-...|...| +++.-...++
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~-------~~~~~~~~L~~~I-~~e~S~w~i~ 88 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENG-------ERVLMEGKLTHKI-NTESSLWSLE 88 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSS-------EEEEEEEEBSSCB-CTTTCEEEEC
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCC-------CceEEcccccCcC-CCcCCEEEEe
Confidence 4578899999999999999999 88 89999999999999998753111 1234557899999 9999999998
Q ss_pred CCE-EEEEEeccCc
Q 028463 184 NGV-LKVTVPKVKE 196 (208)
Q Consensus 184 nGv-L~I~lPK~~~ 196 (208)
+|- |.|+|-|..+
T Consensus 89 ~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 89 PGKCVLVNLSKVGE 102 (124)
T ss_dssp TTSEEEEEECBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 885 9999999753
No 20
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.83 E-value=0.00023 Score=54.34 Aligned_cols=81 Identities=19% Similarity=0.295 Sum_probs=67.5
Q ss_pred CCccceeeEEEcCCeEEEEEEcC-C--CCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEE
Q 028463 105 GGLRRGWDAKETDDALNLSIDMP-G--LGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAE 181 (208)
Q Consensus 105 ~~~~p~~di~e~~d~y~l~vdLP-G--~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~ 181 (208)
|+..+.+.+.++.+.+.|.|.|| | ++.++|+|.+..+.|.|...... +.-...|...| +++.-...
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~----------~~~~~~L~~~I-~~e~s~w~ 72 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQP----------PVVDGELYNEV-KVEESSWL 72 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSC----------CSBCSCBSSCB-CSTTCEEE
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCce----------EEEeccccccc-ccccCEEE
Confidence 45678899999999999999999 6 89999999999999999874211 11224588999 99999999
Q ss_pred EECC-EEEEEEeccCc
Q 028463 182 MKNG-VLKVTVPKVKE 196 (208)
Q Consensus 182 ~~nG-vL~I~lPK~~~ 196 (208)
+++| .|.|+|-|..+
T Consensus 73 i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 73 IEDGKVVTVHLEKINK 88 (131)
T ss_dssp EETTTEEEEEEEBSSS
T ss_pred EcCCCEEEEEEEECCC
Confidence 9998 89999999764
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.73 E-value=0.0004 Score=52.51 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=67.7
Q ss_pred CCccceeeEEEcCCeEEEEEEcC-C--CCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEE
Q 028463 105 GGLRRGWDAKETDDALNLSIDMP-G--LGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAE 181 (208)
Q Consensus 105 ~~~~p~~di~e~~d~y~l~vdLP-G--~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~ 181 (208)
|+..+.+.+.++.+.+.|+|.|| | ++.++|+|.+..+.|.|..... .+.-...|...| +++.-...
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~----------~~~~~g~L~~~I-~~deS~w~ 81 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ----------PAIIDGELYNEV-KVEESSWL 81 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS----------CCSEEEEBSSCB-CGGGCEEE
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc----------ceEEeccccccc-cccccEEE
Confidence 35678899999999999999999 4 7899999999999999876421 112345799999 99999999
Q ss_pred EECC-EEEEEEeccCc
Q 028463 182 MKNG-VLKVTVPKVKE 196 (208)
Q Consensus 182 ~~nG-vL~I~lPK~~~ 196 (208)
+++| .|.|+|-|...
T Consensus 82 i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 82 IADGAVVTVHLEKINK 97 (121)
T ss_dssp EETTTEEEEEEEBSSS
T ss_pred EcCCCEEEEEEEECCC
Confidence 9998 99999998754
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.73 E-value=0.00024 Score=53.95 Aligned_cols=78 Identities=17% Similarity=0.186 Sum_probs=67.1
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEE
Q 028463 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKV 189 (208)
Q Consensus 110 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I 189 (208)
.++++++.+.+.|+|.+|+. ++++|.+..+.|.+.+..... ...|.-.+.|-..| +++.-+..+.++.+.|
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~------~~~y~~~l~L~~~I-~~e~S~~~v~~~kiei 75 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD------NFKHLNEIDLFHCI-DPNDSKHKRTDRSILC 75 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT------TEEEEEEEEBSSCE-EEEEEEEEECSSCEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC------CceEEEEEEcccee-ccccCEEEECCCEEEE
Confidence 79999999999999999995 799999999999999864211 12688889999999 9999999998899999
Q ss_pred EEeccCc
Q 028463 190 TVPKVKE 196 (208)
Q Consensus 190 ~lPK~~~ 196 (208)
+|.|..+
T Consensus 76 ~L~K~~~ 82 (125)
T 1ejf_A 76 CLRKGES 82 (125)
T ss_dssp EEEESST
T ss_pred EEEECCC
Confidence 9999754
No 23
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.70 E-value=0.00019 Score=55.54 Aligned_cols=87 Identities=10% Similarity=0.147 Sum_probs=70.3
Q ss_pred cceeeEEEc-CCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccC-----ccceeeeEEEEEEECCCCCCCCcceEEE
Q 028463 108 RRGWDAKET-DDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEG-----EGEESVRRYTSRIDLPEKLYRTDQIKAE 181 (208)
Q Consensus 108 ~p~~di~e~-~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~-----~~e~~~~~f~r~i~LP~~v~d~~~IkA~ 181 (208)
.+.++++++ .+.+.|.|.++++.+++++|.+..+.|.|........ ........|.-.+.|-..| +++.-+..
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I-~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLI-EPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCE-EEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccC-CchhCEEE
Confidence 567899999 9999999999999999999999999999987532110 0000012677778999999 99998899
Q ss_pred EECCEEEEEEeccC
Q 028463 182 MKNGVLKVTVPKVK 195 (208)
Q Consensus 182 ~~nGvL~I~lPK~~ 195 (208)
+..+-+.|+|.|.+
T Consensus 98 v~~~kIeI~L~K~e 111 (134)
T 1wh0_A 98 FTASRIDICLRKRQ 111 (134)
T ss_dssp ECSSEEEEEEEESS
T ss_pred EeCCEEEEEEEECC
Confidence 99999999999974
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.51 E-value=0.00083 Score=51.33 Aligned_cols=76 Identities=9% Similarity=0.222 Sum_probs=63.2
Q ss_pred cceeeEEEcCCeEEEEEEcC-CCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCE
Q 028463 108 RRGWDAKETDDALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 186 (208)
Q Consensus 108 ~p~~di~e~~d~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGv 186 (208)
.+.+.+.++.+.+.|.|.|| |++.++|+|.+..+.|.|.+... . .-...|...| +++.-...+++|-
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g~----------~-~~~~~L~~~I-~~e~S~w~i~~~k 71 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQGE----------I-VIDGELLHEV-DVSSLWWVINGDV 71 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETTE----------E-EEEEEBSSCE-EEEEEEEEEETTE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECCE----------e-eEcccccccc-ccccCEEEEeCCE
Confidence 57799999999999999996 89999999999999999987411 1 3346799999 9999999999999
Q ss_pred EEEEEeccC
Q 028463 187 LKVTVPKVK 195 (208)
Q Consensus 187 L~I~lPK~~ 195 (208)
|.|+|-|..
T Consensus 72 v~i~L~K~~ 80 (131)
T 2o30_A 72 VDVNVTKKR 80 (131)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 999999973
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.45 E-value=0.0014 Score=51.76 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=66.7
Q ss_pred ccceeeEEEcCCeEEEEEEcC-CCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECC
Q 028463 107 LRRGWDAKETDDALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNG 185 (208)
Q Consensus 107 ~~p~~di~e~~d~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nG 185 (208)
..+.+.+.++.+.+.|+|.|| |++.++|+|.+..+.|.|.... . .+ -...|...| +++.-...+++|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg-------~---~~-l~g~L~~~I-~~eeS~w~i~~~ 79 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG-------R---EI-LKGKLFDST-IADEGTWTLEDR 79 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT-------E---EE-EEEEBSSCB-CGGGCEEEEECC
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC-------E---EE-Eeecccccc-CccccEEEEcCC
Confidence 467899999999999999998 8999999999999999998741 1 22 446799999 999999999988
Q ss_pred E-EEEEEeccCc
Q 028463 186 V-LKVTVPKVKE 196 (208)
Q Consensus 186 v-L~I~lPK~~~ 196 (208)
- |.|+|-|...
T Consensus 80 k~v~I~L~K~~~ 91 (157)
T 2rh0_A 80 KMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEEEEBSSC
T ss_pred cEEEEEEEEcCC
Confidence 4 9999999854
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.30 E-value=0.00076 Score=53.00 Aligned_cols=78 Identities=17% Similarity=0.257 Sum_probs=66.2
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEE-CCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCE
Q 028463 108 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLE-QNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 186 (208)
Q Consensus 108 ~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~-~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGv 186 (208)
.|.++++++.+.++|+|.+|++ ++++|.+. .+.|.+++. ... ...|.-.+.|-..| +++ -+......-
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~~~------~~~y~~~l~L~~~I-dpe-S~~~v~~~k 72 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-GAQ------GERFEFSLELYGKI-MTE-YRKNVGLRN 72 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-TTT------TEEEEEEEEBSSCE-EEE-EEEEEESSS
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-cCC------CceEEEEeEhhhcc-ccc-ceEEecCCE
Confidence 5789999999999999999997 58999999 789999986 111 13688889999999 899 888888888
Q ss_pred EEEEEeccCc
Q 028463 187 LKVTVPKVKE 196 (208)
Q Consensus 187 L~I~lPK~~~ 196 (208)
+.|+|.|.++
T Consensus 73 Iei~L~K~e~ 82 (150)
T 2kmw_A 73 IIFSIQKEER 82 (150)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999999754
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.00019 Score=55.32 Aligned_cols=84 Identities=11% Similarity=0.214 Sum_probs=61.2
Q ss_pred cceeeEEEcCCe-------EEEEEEcCCCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEE
Q 028463 108 RRGWDAKETDDA-------LNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKA 180 (208)
Q Consensus 108 ~p~~di~e~~d~-------y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA 180 (208)
.|.+.+.++.+. +.|+|.+|++. +++|.+..+.|.|++....... ......|.-.+.|...| +++.-+.
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g-~~~~~~y~~~l~L~~~I-dpe~S~~ 81 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHVG-DENVHHYQLHIDLYKEI-IPEKTMH 81 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC--------CEEBCEEEECSSCC-CSSSEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEecccccC-CccCceEEEEEEChhhc-cccccEE
Confidence 466777887766 99999999974 8889999999999876432000 00113678889999999 9999999
Q ss_pred EEECCE-EEEEEeccC
Q 028463 181 EMKNGV-LKVTVPKVK 195 (208)
Q Consensus 181 ~~~nGv-L~I~lPK~~ 195 (208)
.+.++. +.|+|.|..
T Consensus 82 ~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKD 97 (134)
T ss_dssp EECCC--CEEEEEECS
T ss_pred EECCCEEEEEEEEECC
Confidence 999998 999999976
No 28
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=78.13 E-value=15 Score=28.15 Aligned_cols=30 Identities=13% Similarity=0.175 Sum_probs=25.0
Q ss_pred EEEECCCCCCCCcceEEEEECCEEEEEEeccC
Q 028463 164 SRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVK 195 (208)
Q Consensus 164 r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~~ 195 (208)
-.+.||. + +.+.|+-.+++|.|+|+.-+..
T Consensus 70 v~~dlPG-~-~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 70 VIAWLPG-V-NKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEECTT-C-CGGGEEEEEETTEEEEEEECCC
T ss_pred EEEECCC-C-ChHhEEEEEECCEEEEEEEEcc
Confidence 3345987 6 7999999999999999987765
No 29
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=76.01 E-value=9.5 Score=26.90 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=27.6
Q ss_pred EEEEEEcC-CCCccceEEEEECCEEEEEeeeccc
Q 028463 120 LNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKE 152 (208)
Q Consensus 120 y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~ 152 (208)
|.-.+.|| +++.+.|+-.+++|.|+|+..+...
T Consensus 63 f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 44478899 6899999999999999999876554
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=74.22 E-value=15 Score=25.53 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=27.8
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEeccCc
Q 028463 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKE 196 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~~~ 196 (208)
.|.-.+.||. + +.++|+-.+++|.|+|..-+..+
T Consensus 15 ~~~v~~~lPG-~-~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 15 HFVLYADLPG-I-DPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp EEEEEEECTT-S-CGGGCEEEEETTEEEEEEEECCG
T ss_pred EEEEEEECCC-C-CHHHEEEEEECCEEEEEEEEcCc
Confidence 5566677996 6 89999999999999999876543
No 31
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=69.78 E-value=11 Score=25.79 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=28.4
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEeccC
Q 028463 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVK 195 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~~ 195 (208)
.|.-.+.||. + +.+.|+-.+++|.|+|..-+..
T Consensus 8 ~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVNH-F-APDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECTT-T-CCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEcc
Confidence 6788889997 6 8999999999999999987653
No 32
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=61.84 E-value=35 Score=24.66 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=26.3
Q ss_pred EEEEEECCCCCCCCcceEEEEEC-CEEEEEEeccCc
Q 028463 162 YTSRIDLPEKLYRTDQIKAEMKN-GVLKVTVPKVKE 196 (208)
Q Consensus 162 f~r~i~LP~~v~d~~~IkA~~~n-GvL~I~lPK~~~ 196 (208)
|.-.+.||. + +.+.|+-.+.+ |.|+|..-+..+
T Consensus 36 ~~v~~~lPG-~-~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLAG-F-NKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECCS-C-CGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEECCC-C-CHHHEEEEEeCCCEEEEEEEEecc
Confidence 444455996 6 79999999999 999999987643
No 33
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=60.85 E-value=22 Score=25.41 Aligned_cols=45 Identities=22% Similarity=0.357 Sum_probs=30.4
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECC-CCCCCCcceEEEEECCE---EEEEEec
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLP-EKLYRTDQIKAEMKNGV---LKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP-~~v~d~~~IkA~~~nGv---L~I~lPK 193 (208)
|+.|+|+++++.++|+|.+.. -+..|| .. |+...+++. |.|..+.
T Consensus 20 P~gV~V~i~~~~VtVKGPkG~------------L~~~~~h~~------v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPRGT------------LRRDFNHIN------VELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEETTEEEEEETTEE------------EEEECCSSC------CEEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEeCCEEEEECCCce------------EEEEeccCc------EEEEEcCCceeEEEEEccC
Confidence 478899999999999997432 223455 33 455667766 7776554
No 34
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=56.54 E-value=50 Score=24.87 Aligned_cols=43 Identities=23% Similarity=0.428 Sum_probs=31.7
Q ss_pred ceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEE-CCEEEEEEeccCc
Q 028463 133 DVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMK-NGVLKVTVPKVKE 196 (208)
Q Consensus 133 dI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~-nGvL~I~lPK~~~ 196 (208)
.++|.-.++.+.|... ||. + +.+.|+..++ ++.|+|..-+..+
T Consensus 45 ~~di~e~~d~~~v~~d-------------------lPG-v-~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 45 RMDWKETPEAHVFKAD-------------------LPG-V-KKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp CEEEEECSSEEEEEEE-------------------CTT-C-CGGGEEEEEETTTEEEEEECCCCC
T ss_pred ceEEEEcCCEEEEEEE-------------------CCC-C-ChHHEEEEEecCCEEEEEEEEccc
Confidence 4555555666666654 996 6 8999999995 5799999977644
No 35
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=55.88 E-value=21 Score=24.43 Aligned_cols=32 Identities=16% Similarity=0.403 Sum_probs=27.8
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEecc
Q 028463 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKV 194 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~ 194 (208)
.|.-.+.||. + +.+.|+-.+++|.|+|..-+.
T Consensus 7 ~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 7 RFSVNLDVKH-F-SPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECCC-C-cHHHeEEEEECCEEEEEEEEe
Confidence 6777888995 6 899999999999999998764
No 36
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=53.45 E-value=25 Score=24.92 Aligned_cols=32 Identities=3% Similarity=0.273 Sum_probs=27.2
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEecc
Q 028463 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKV 194 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~ 194 (208)
.|.-.+.||. + +.+.|+-.+++|.|+|.--+.
T Consensus 13 ~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVKH-F-SPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEc
Confidence 6667778996 6 899999999999999998653
No 37
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=53.43 E-value=36 Score=23.82 Aligned_cols=33 Identities=9% Similarity=0.264 Sum_probs=28.2
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEeccC
Q 028463 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVK 195 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~~ 195 (208)
.|.-.+.||. + +.+.|+-.+++|.|+|..-+..
T Consensus 12 ~~~v~~dlPG-~-~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVKH-F-SPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECCC-C-cHHHeEEEEECCEEEEEEEEec
Confidence 5777888995 6 8999999999999999987653
No 38
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=50.64 E-value=15 Score=29.14 Aligned_cols=46 Identities=15% Similarity=0.279 Sum_probs=32.0
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEEC-CCCCCCCcceEEEEECCEEEEEEecc
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDL-PEKLYRTDQIKAEMKNGVLKVTVPKV 194 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~L-P~~v~d~~~IkA~~~nGvL~I~lPK~ 194 (208)
|+.|+|+++++.++|+|.+. ..+ ..| +..+ +...++|.|.|..+..
T Consensus 9 P~gV~v~i~~~~vtVkGpkG----------~L~--~~~~~~~v------~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNG----------SVT--RRLWYPDI------DVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEE--EECCCTTC------EEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCe----------EEE--EEEECCeE------EEEEECCEEEEEcCCC
Confidence 37889999999999999743 222 334 4434 4567899988876543
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=49.97 E-value=47 Score=26.16 Aligned_cols=45 Identities=24% Similarity=0.443 Sum_probs=32.1
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEec
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK 193 (208)
++.|+|+++++.++|+|... ..+ ..|+..+ +...+||.|.|..+.
T Consensus 11 P~gV~V~i~~~~VtVkGpkG----------~L~--~~~~~~v------~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPKG----------ELT--RTFHPDM------TITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEE--EECCTTC------EEEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCCe----------EEE--EEcCCCE------EEEEeCCEEEEEcCC
Confidence 47889999999999999742 222 3445544 445789998887654
No 40
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=46.04 E-value=13 Score=25.07 Aligned_cols=15 Identities=40% Similarity=0.472 Sum_probs=12.4
Q ss_pred cceEEEEECCEEEEE
Q 028463 176 DQIKAEMKNGVLKVT 190 (208)
Q Consensus 176 ~~IkA~~~nGvL~I~ 190 (208)
..|+|.|+||||+--
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 469999999999743
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=44.63 E-value=26 Score=28.64 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=32.0
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEecc
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKV 194 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~ 194 (208)
++.|+|+++++.++|+|... ..+ ..|+..+ +...++|.|.|..+..
T Consensus 39 P~gV~V~i~~~~VtVKGPkG----------~L~--~~~~~~v------~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPKG----------ELT--VPYNTEL------TVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCCE----------EEE--EECCCCe------EEEEECCEEEEEcCCC
Confidence 37788999999999999743 222 3345444 4567899988876543
No 42
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=43.19 E-value=31 Score=24.37 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=30.1
Q ss_pred CCeEEEEEEcCC-CCccceEEEEECCEEEEEeeecc
Q 028463 117 DDALNLSIDMPG-LGKEDVRVSLEQNTLVIRGEGGK 151 (208)
Q Consensus 117 ~d~y~l~vdLPG-~~kedI~V~v~~~~L~I~g~~~~ 151 (208)
+..|.+.++|++ +.+++.+..+.++.|.|.-.+..
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcCC
Confidence 568999999997 69999999999999999887543
No 43
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=42.84 E-value=41 Score=26.56 Aligned_cols=44 Identities=18% Similarity=0.480 Sum_probs=31.2
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEe
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 192 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lP 192 (208)
++.|+|+++++.++|+|... .-+ ..|+..| +-.++++.|.|..+
T Consensus 12 P~gV~v~i~~~~v~VkGpkG----------~L~--~~~~~~v------~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKG----------ELE--VPVSPEM------RVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSSC----------EEE--EECCTTS------EEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCCc----------EEE--EEeCCCE------EEEEECCEEEEEEC
Confidence 47899999999999999743 222 3355544 34567998888754
No 44
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=39.43 E-value=48 Score=25.84 Aligned_cols=32 Identities=16% Similarity=0.403 Sum_probs=26.8
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEecc
Q 028463 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKV 194 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~ 194 (208)
.|.-.+.||. + +.+.|+.++++|.|+|.--+.
T Consensus 74 ~~~v~~dlPG-~-~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 74 RFSVNLDVKH-F-SPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp EEEEEECCSS-C-CGGGEEEEEETTEEEEEEEEE
T ss_pred eEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEc
Confidence 5666677996 6 799999999999999998664
No 45
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=38.78 E-value=87 Score=24.89 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=31.3
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEE--ECCEEEEEEec
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEM--KNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~--~nGvL~I~lPK 193 (208)
|+.|+|+++++.++|+|.+. .-+ ..|+.. .++-.+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG----------~L~--~~~~~~-----~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPRG----------KLT--RNFKHL-----NLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEE--EECCCT-----TEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCCEEEEECCCc----------eEE--EEccCC-----cEEEEEEcCCCEEEEEECC
Confidence 47899999999999999743 222 234321 244556 78888888654
No 46
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=38.61 E-value=27 Score=27.77 Aligned_cols=50 Identities=18% Similarity=0.339 Sum_probs=33.6
Q ss_pred EEEEEcCCCCccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECC-CCCCCCcceEEEEECCEEEEEEe
Q 028463 121 NLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLP-EKLYRTDQIKAEMKNGVLKVTVP 192 (208)
Q Consensus 121 ~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP-~~v~d~~~IkA~~~nGvL~I~lP 192 (208)
.-.+++| +.|+|+++++.++|+|.+. .-+ ..|+ .. ++-..+++.|.|..+
T Consensus 8 ~~~I~IP----~gV~v~i~~~~V~VkGpkG----------~L~--~~~~~~~------v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 8 REEVEIP----EGVEVTVEGYKVKVKGPKG----------ELE--REFFWPG------IQIFTEDGNVVIYKD 58 (184)
T ss_dssp EEEEECC----SSCEEEESSSEEEEECSSC----------EEE--EECCCTT------CEEEEETTEEEEECS
T ss_pred eEEEeCC----CCcEEEEeCCEEEEEcCCe----------EEE--EEecCCc------EEEEEeCCEEEEEEC
Confidence 3345555 7899999999999999743 222 3343 22 445678998888753
No 47
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=38.28 E-value=26 Score=23.63 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=29.1
Q ss_pred CCeEEEEEEcCC-CCccceEEEEECCEEEEEeeecc
Q 028463 117 DDALNLSIDMPG-LGKEDVRVSLEQNTLVIRGEGGK 151 (208)
Q Consensus 117 ~d~y~l~vdLPG-~~kedI~V~v~~~~L~I~g~~~~ 151 (208)
+..|.+.++|++ +.+++.+..+.++.|.|.-.+..
T Consensus 46 ~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 46 EDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp SCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred CcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 457999999997 68999999999999999877543
No 48
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=35.03 E-value=95 Score=25.01 Aligned_cols=31 Identities=23% Similarity=0.111 Sum_probs=18.2
Q ss_pred CeEEEEEEcCCCCccceEEEEECCEEEEEee
Q 028463 118 DALNLSIDMPGLGKEDVRVSLEQNTLVIRGE 148 (208)
Q Consensus 118 d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~ 148 (208)
+.+.|+++-+.--.+.|++.+++++|.|+-+
T Consensus 41 ~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~ 71 (250)
T 3jx8_A 41 KAPYLSVTIDENLFDYLVTEVEGGTLKIYPK 71 (250)
T ss_dssp SCCEEEEEEEGGGGGGEEEEEETTEEEEEEC
T ss_pred CCceEEEEECccccceEEEEEECCEEEEEEc
Confidence 3455555554433456667777777777654
No 49
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=30.52 E-value=1.8e+02 Score=23.06 Aligned_cols=45 Identities=27% Similarity=0.425 Sum_probs=30.9
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCC-CCCCCcceEEE-EECCEEEEEEec
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPE-KLYRTDQIKAE-MKNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~-~v~d~~~IkA~-~~nGvL~I~lPK 193 (208)
|+.|+|+++++.++|+|.+. .-++ .|+. .+ +-. .++|.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG----------~L~~--~~~~~~v------~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPRG----------TLTK--NLKHIDV------TFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEEE--ECTTTCC------EEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCCe----------EEEE--EccCCcE------EEEEecCCeEEEEECC
Confidence 48899999999999999743 2223 3443 33 334 468999888654
No 50
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=30.47 E-value=28 Score=25.19 Aligned_cols=18 Identities=33% Similarity=0.626 Sum_probs=15.3
Q ss_pred cceEEEEECCEEEEEEec
Q 028463 176 DQIKAEMKNGVLKVTVPK 193 (208)
Q Consensus 176 ~~IkA~~~nGvL~I~lPK 193 (208)
..+.+++.+|||+|+++.
T Consensus 28 ~d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 28 SDIDCEINGGVLTITFEN 45 (106)
T ss_dssp SCCEEEEETTEEEEECTT
T ss_pred CCEeeeccCCEEEEEECC
Confidence 348899999999999974
No 51
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=28.48 E-value=31 Score=28.41 Aligned_cols=46 Identities=22% Similarity=0.445 Sum_probs=31.2
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEec
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK 193 (208)
++.|+|+++++.++|+|.... . +..|+..| +.. ..+||.|.|..+.
T Consensus 54 P~gV~V~i~~~~VtVKGPkG~----------L--~~~~~~~v-~i~----~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPLGE----------L--ALTYPREV-ELT----KEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESSSEEEECCSSCC----------E--EEECCSSC-EEE----ECSSSCEEEECSS
T ss_pred CCCCEEEEeCCEEEEECCCeE----------E--EEEcCCCE-EEE----EecCCEEEEEcCC
Confidence 467888999999999997533 2 23456655 320 4578888887654
No 52
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=27.01 E-value=31 Score=23.26 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=18.8
Q ss_pred CCCccceEEEEECCEEEEEeee
Q 028463 128 GLGKEDVRVSLEQNTLVIRGEG 149 (208)
Q Consensus 128 G~~kedI~V~v~~~~L~I~g~~ 149 (208)
-|+.+.|.+....+.|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTEEEEEEEEC
T ss_pred EECCCEEEEEeCceEEEEEcCC
Confidence 3578899999999999999984
No 53
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=25.91 E-value=93 Score=24.69 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=29.9
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCC-CCCCCcceEEEE-ECCEEEEEEe
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPE-KLYRTDQIKAEM-KNGVLKVTVP 192 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~-~v~d~~~IkA~~-~nGvL~I~lP 192 (208)
|+.|+|+++++.++|+|.+. .- +..|+. .+ + -.+ +++.|.|..+
T Consensus 13 P~gV~v~i~~~~V~VkGPkG----------~L--~~~~~~~~v-~-----i~~~~~~~l~v~~~ 58 (188)
T 4a17_E 13 PDKVTITAKQRVVEVKGPLG----------TI--KRAFRYASV-D-----IQKPTADNVKLQIW 58 (188)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EE--EEECTTSCC-E-----ECCCBTTBCEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCCe----------EE--EEEccCCeE-E-----EEEccCCeEEEEEC
Confidence 58899999999999999743 22 233543 34 3 233 6788888765
No 54
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=25.83 E-value=78 Score=25.56 Aligned_cols=41 Identities=10% Similarity=-0.014 Sum_probs=26.8
Q ss_pred cceeeEEEcCCeEEEEEEcCC---------CCccceEEEEEC---CEEEEEee
Q 028463 108 RRGWDAKETDDALNLSIDMPG---------LGKEDVRVSLEQ---NTLVIRGE 148 (208)
Q Consensus 108 ~p~~di~e~~d~y~l~vdLPG---------~~kedI~V~v~~---~~L~I~g~ 148 (208)
.+.+++.-.++.+.|...-.. +....++|.+.- ..|.+.|.
T Consensus 54 ~~~i~~~v~~g~L~I~~~~~~~~~~~~~~~~~~~~~~v~V~~p~L~~i~~~gs 106 (250)
T 3jx8_A 54 FDYLVTEVEGGTLKIYPKSIKKGFNNNSYDLRPTVYKIKSNSKELKELNTVGS 106 (250)
T ss_dssp GGGEEEEEETTEEEEEECBCTTTTTSCBCEEECSCEEEEEEESCCSEEEEESS
T ss_pred cceEEEEEECCEEEEEEcCCccccccceeecCCcEEEEEEEccceeeEEeccc
Confidence 456777778888888887541 223467777752 56666654
No 55
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.60 E-value=1.3e+02 Score=23.80 Aligned_cols=47 Identities=21% Similarity=0.329 Sum_probs=32.1
Q ss_pred CccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCE---EEEEEec
Q 028463 130 GKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV---LKVTVPK 193 (208)
Q Consensus 130 ~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGv---L~I~lPK 193 (208)
=|+.|+|+++++.++|+|... .. +..||.. .++...++|. |.|..+.
T Consensus 12 IP~gV~V~i~~~~VtVkGpkG----------~L--~~~~~~~-----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 12 IPENVDITLKGRTVIVKGPRG----------TL--RRDFNHI-----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp CCTTCEEEEETTEEEEEETTE----------EE--EEECCSS-----SCEEEEETTTTCEEEEECSC
T ss_pred cCCCCEEEEeCCEEEEECCCe----------EE--EEEeCCC-----CEEEEEecCceeEEEEEcCC
Confidence 357899999999999999743 22 2345541 2445678888 7777654
No 56
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=25.27 E-value=1.9e+02 Score=23.59 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=41.7
Q ss_pred EEEEEE---cCCCCccceEEEEE--CCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEEE
Q 028463 120 LNLSID---MPGLGKEDVRVSLE--QNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVT 190 (208)
Q Consensus 120 y~l~vd---LPG~~kedI~V~v~--~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~ 190 (208)
|.+.++ |||+..+==-|..+ +++|.+........-.=...+...+++.|...- |++.|... .+|.+.|.
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~-D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVK-DLETIEYI-GDNQFVIS 86 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCS-SEEEEEEC-STTEEEEE
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCC-ChHHeEEe-CCCEEEEE
Confidence 445444 99998753336666 578877554321110001126789999998766 88888654 66666553
No 57
>3ljy_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: PGE; 2.41A {Parabacteroides distasonis}
Probab=24.60 E-value=1.5e+02 Score=23.79 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=0.0
Q ss_pred EEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccCccceeeeEEE-EEEECCCCCCCCcceEEEEECCEEEEEE
Q 028463 113 AKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYT-SRIDLPEKLYRTDQIKAEMKNGVLKVTV 191 (208)
Q Consensus 113 i~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~-r~i~LP~~v~d~~~IkA~~~nGvL~I~l 191 (208)
|.-.++-..-+.++++| +.|+|.-.-+...++|. .+. -.+.=++++ .+.|+.+.+||.|+|.+
T Consensus 6 ikg~g~~vt~~~~v~~F--~~I~v~~~~~V~l~qg~------------~~~~V~i~~~~nl--~~~i~~~v~~g~L~I~~ 69 (243)
T 3ljy_A 6 VKGDGKLTSKKISVADY--NEIKVDGVIDFNYEQSD------------DPSTVEVTVDQNL--HPYVNIEVKDRVLTIAF 69 (243)
T ss_dssp EECCSCEEEEEEECCCC--SEEEECSSCEEEEEECS------------SCCEEEEEEEGGG--GGGEEEEEETTEEEEEE
T ss_pred EECCCCEEEEEEEcCCc--cEEEEcccEEEEEEECC------------CCcEEEEEECcch--hceEEEEEECCEEEEEE
Q ss_pred eccCcccCCceeEeec
Q 028463 192 PKVKEEERADVFQVKV 207 (208)
Q Consensus 192 PK~~~~~~~~~i~I~I 207 (208)
.+. ..-.+..+.|.|
T Consensus 70 ~~~-~~~~~~~~~v~V 84 (243)
T 3ljy_A 70 KGA-KVDHFTKFIVKT 84 (243)
T ss_dssp CSS-EEEECSCEEEEE
T ss_pred cCC-ceeCCceEEEEE
No 58
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=23.34 E-value=36 Score=26.81 Aligned_cols=43 Identities=16% Similarity=0.323 Sum_probs=30.4
Q ss_pred ccceEEEEECCEEEEEeeecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEEEE
Q 028463 131 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTV 191 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~l 191 (208)
++.|+|+++++.++|+|....- +..|+..| +-.++++.|+|..
T Consensus 11 P~gV~v~i~~~~V~VkGpkG~L------------~~~~~~~v------~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKINGQVITIKGKNGEL------------TRTLNDAV------EVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESSSEEECCBTTBCC------------EEECCSSC------EEEEETTEEEEEC
T ss_pred CCCcEEEEeCCEEEEEcCCEEE------------EEECCCCE------EEEEeCCEEEEEE
Confidence 4788899999999999975431 23345544 4567889988873
No 59
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=22.66 E-value=57 Score=24.28 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=14.5
Q ss_pred eEEEEECCEEEEEEec
Q 028463 178 IKAEMKNGVLKVTVPK 193 (208)
Q Consensus 178 IkA~~~nGvL~I~lPK 193 (208)
+.+++.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7899999999999974
No 60
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A
Probab=22.44 E-value=64 Score=29.56 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=24.7
Q ss_pred CCCCCCCCcceEEEEECCEEEEEEeccCcccCCceeEeecC
Q 028463 168 LPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 208 (208)
Q Consensus 168 LP~~v~d~~~IkA~~~nGvL~I~lPK~~~~~~~~~i~I~IE 208 (208)
=|+.| .+.. .+..++|.|+++||..- -.+++++.|
T Consensus 470 ~P~~V-~p~~-~~~~~~~~~~~~lp~~S----~~vl~l~~~ 504 (504)
T 3ug3_A 470 NPNVV-DITS-ETITVDTEFEHTFKPFS----CSVIEVELE 504 (504)
T ss_dssp CTTSS-EEEE-EEEEECSEEEEEECTTE----EEEEEEEC-
T ss_pred CCCEE-Eeee-eeEecCCEEEEEECCCE----EEEEEEEeC
Confidence 46677 5665 67789999999999862 236666655
No 61
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=21.21 E-value=1.2e+02 Score=21.99 Aligned_cols=29 Identities=14% Similarity=0.123 Sum_probs=22.0
Q ss_pred EEEEECCCCCCCCcceEEEEECCEEEEEEe
Q 028463 163 TSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 192 (208)
Q Consensus 163 ~r~i~LP~~v~d~~~IkA~~~nGvL~I~lP 192 (208)
.-.|.||.++ +.+.++..++..-|.|.+.
T Consensus 17 ~i~I~lp~~~-~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 17 NIQFPVTGDA-DSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp EEEEECC----CCSCEEEEEETTEEEEEET
T ss_pred EEEEECCCCC-CccceEEEEECCEEEEEEC
Confidence 4457899988 8999999999999999873
No 62
>3lyc_A Putative pectinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: MSE; 2.30A {Parabacteroides distasonis}
Probab=20.46 E-value=1.2e+02 Score=24.28 Aligned_cols=61 Identities=11% Similarity=0.063 Sum_probs=0.0
Q ss_pred cceEEEE-ECCEEEEEe-eecccCccceeeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEecc----CcccCCceeEe
Q 028463 132 EDVRVSL-EQNTLVIRG-EGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKV----KEEERADVFQV 205 (208)
Q Consensus 132 edI~V~v-~~~~L~I~g-~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~IkA~~~nGvL~I~lPK~----~~~~~~~~i~I 205 (208)
+.|+|.- .-+.-..+| . .+.-.|.=|+++ .+.++.+.++|.|+|..++. ..-... .+.|
T Consensus 17 ~~I~v~~~~~~V~l~qgd~------------~~~V~i~~~~nl--~~~v~~~v~~g~L~I~~~~~~~~~~~~~~~-~i~v 81 (241)
T 3lyc_A 17 DCLELEGGGMVVNYTQSDA------------PEGLEIKTDRNI--FEKYEFNVENHKLKIRPKKEFRKHTNFRPT-EFMV 81 (241)
T ss_dssp SEEEEEEEEEEEEEEECSS------------CCEEEEEEEHHH--HTTEEEEEETTEEEEEECGGGCSCSCCCCS-CEEE
T ss_pred cEEEEeCccEEEEEEECCC------------CceEEEEECccc--cceEEEEEECCEEEEEEcCCcccceeecCc-eEEE
Q ss_pred ec
Q 028463 206 KV 207 (208)
Q Consensus 206 ~I 207 (208)
.|
T Consensus 82 ~V 83 (241)
T 3lyc_A 82 TA 83 (241)
T ss_dssp EE
T ss_pred EE
No 63
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=20.35 E-value=70 Score=23.90 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=15.1
Q ss_pred cceEEEEECCEEEEEEe
Q 028463 176 DQIKAEMKNGVLKVTVP 192 (208)
Q Consensus 176 ~~IkA~~~nGvL~I~lP 192 (208)
..+.+++.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 56889999999999996
Done!