Query 028464
Match_columns 208
No_of_seqs 146 out of 1478
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 11:54:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028464.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028464hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0880 Peptidyl-prolyl cis-tr 100.0 5.3E-55 1.1E-59 342.4 16.7 190 12-208 13-204 (217)
2 KOG0546 HSP90 co-chaperone CPR 100.0 1.7E-55 3.8E-60 373.2 14.6 171 37-207 7-179 (372)
3 PTZ00060 cyclophilin; Provisio 100.0 2.8E-49 6E-54 316.4 20.0 169 38-207 15-183 (183)
4 cd01926 cyclophilin_ABH_like c 100.0 3.8E-49 8.2E-54 310.8 19.7 164 39-204 1-164 (164)
5 PLN03149 peptidyl-prolyl isome 100.0 1.2E-47 2.5E-52 307.5 18.6 167 38-206 18-186 (186)
6 KOG0879 U-snRNP-associated cyc 100.0 3.6E-48 7.8E-53 287.3 13.4 170 35-206 7-177 (177)
7 PTZ00221 cyclophilin; Provisio 100.0 1.1E-46 2.5E-51 311.6 20.3 170 34-207 48-220 (249)
8 KOG0881 Cyclophilin type pepti 100.0 5.5E-46 1.2E-50 272.7 8.7 152 39-206 10-163 (164)
9 cd01923 cyclophilin_RING cyclo 100.0 2.5E-44 5.3E-49 282.0 18.0 147 50-207 6-154 (159)
10 COG0652 PpiB Peptidyl-prolyl c 100.0 2E-44 4.3E-49 279.4 15.2 145 49-206 5-157 (158)
11 cd01927 cyclophilin_WD40 cyclo 100.0 6.9E-44 1.5E-48 276.4 16.7 142 50-202 4-147 (148)
12 cd01928 Cyclophilin_PPIL3_like 100.0 1.1E-43 2.3E-48 276.7 17.7 144 50-204 7-152 (153)
13 cd01922 cyclophilin_SpCYP2_lik 100.0 6.9E-44 1.5E-48 275.8 16.3 142 50-202 4-146 (146)
14 cd01921 cyclophilin_RRM cyclop 100.0 7E-43 1.5E-47 275.7 17.1 147 50-207 4-160 (166)
15 PRK10903 peptidyl-prolyl cis-t 100.0 2.1E-42 4.5E-47 277.9 19.6 145 50-207 35-190 (190)
16 KOG0111 Cyclophilin-type pepti 100.0 3E-43 6.5E-48 280.6 10.5 164 37-207 135-298 (298)
17 cd01925 cyclophilin_CeCYP16-li 100.0 2.3E-41 5E-46 268.1 18.0 156 36-207 3-161 (171)
18 KOG0883 Cyclophilin type, U bo 100.0 5.4E-42 1.2E-46 292.0 11.7 158 35-206 272-431 (518)
19 PRK10791 peptidyl-prolyl cis-t 100.0 3.3E-40 7.2E-45 259.6 16.5 144 50-206 6-163 (164)
20 cd01920 cyclophilin_EcCYP_like 100.0 1.9E-39 4.1E-44 253.4 16.2 140 50-202 4-154 (155)
21 PF00160 Pro_isomerase: Cyclop 100.0 3.9E-39 8.4E-44 251.2 16.4 151 42-205 1-155 (155)
22 KOG0882 Cyclophilin-related pe 100.0 8.6E-40 1.9E-44 283.0 10.9 144 50-204 411-556 (558)
23 KOG0884 Similar to cyclophilin 100.0 9.1E-39 2E-43 233.4 11.2 144 50-204 7-153 (161)
24 cd00317 cyclophilin cyclophili 100.0 5.4E-38 1.2E-42 242.5 15.9 141 50-202 4-146 (146)
25 KOG0865 Cyclophilin type pepti 100.0 1E-37 2.3E-42 243.7 9.8 163 37-206 2-167 (167)
26 cd01924 cyclophilin_TLP40_like 100.0 1.8E-36 3.8E-41 240.9 15.2 128 49-186 3-164 (176)
27 KOG0885 Peptidyl-prolyl cis-tr 100.0 2.7E-35 5.8E-40 249.9 11.9 158 34-207 8-168 (439)
28 KOG0415 Predicted peptidyl pro 100.0 2.6E-34 5.7E-39 242.6 12.5 147 50-207 7-163 (479)
29 KOG0882 Cyclophilin-related pe 97.5 0.00013 2.9E-09 64.9 4.4 140 54-204 113-260 (558)
30 TIGR03268 methan_mark_3 putati 96.7 0.016 3.6E-07 52.5 9.9 114 54-186 376-495 (503)
31 COG4070 Predicted peptidyl-pro 96.6 0.0083 1.8E-07 52.9 7.2 102 53-185 203-304 (512)
32 PRK00969 hypothetical protein; 96.6 0.013 2.9E-07 53.2 8.7 101 54-185 205-305 (508)
33 TIGR03268 methan_mark_3 putati 96.6 0.016 3.5E-07 52.5 9.1 101 54-185 202-302 (503)
34 PRK00969 hypothetical protein; 96.2 0.042 9.1E-07 50.0 9.8 113 54-186 379-497 (508)
35 PF12903 DUF3830: Protein of u 95.6 0.058 1.3E-06 41.6 6.8 107 54-185 9-129 (147)
36 COG4070 Predicted peptidyl-pro 94.5 0.14 3E-06 45.4 7.0 115 54-187 377-499 (512)
37 PF07172 GRP: Glycine rich pro 90.1 0.31 6.7E-06 34.9 2.8 26 1-27 1-26 (95)
38 PF04126 Cyclophil_like: Cyclo 60.8 8.5 0.00018 28.5 2.6 46 135-185 60-112 (120)
39 PF05913 DUF871: Bacterial pro 52.2 8.7 0.00019 34.0 1.7 50 135-185 298-348 (357)
40 COG2164 Uncharacterized conser 47.6 13 0.00029 26.9 1.7 32 154-185 79-116 (126)
41 PF07172 GRP: Glycine rich pro 46.1 20 0.00044 25.5 2.4 26 8-33 3-28 (95)
42 PF08415 NRPS: Nonribosomal pe 43.6 24 0.00052 22.3 2.3 27 175-202 4-30 (58)
43 PF11314 DUF3117: Protein of u 29.6 27 0.00057 21.7 0.8 27 39-67 17-43 (51)
44 PRK15310 fimbrial outer membra 26.8 1.4E+02 0.003 29.8 5.4 27 37-63 33-59 (895)
45 PRK06287 cobalt transport prot 26.7 99 0.0021 22.4 3.5 26 1-26 1-26 (107)
46 PRK11917 bifunctional adhesin/ 25.9 37 0.0008 28.0 1.3 15 1-15 1-15 (259)
47 COG0219 CspR Predicted rRNA me 24.9 1.2E+02 0.0026 23.6 3.8 33 55-100 3-35 (155)
48 TIGR03562 osmo_induc_OsmC pero 21.5 3.5E+02 0.0077 20.2 6.3 13 63-75 105-117 (135)
49 PF15240 Pro-rich: Proline-ric 20.4 69 0.0015 25.6 1.7 12 21-32 10-21 (179)
No 1
>KOG0880 consensus Peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.3e-55 Score=342.39 Aligned_cols=190 Identities=67% Similarity=1.070 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHhcCCCcccccccccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhh-cCCCcccCCCcccc
Q 028464 12 LLWALVLFLTLAFIQEGNSREELEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCT-GEKGIGKSGKPLYY 90 (208)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~-g~~g~~~~~~~~~Y 90 (208)
++++.++++....+.+.......|+++++|||||++.+...|||+|+||++.+|+||+||.+||. +.++. .|
T Consensus 13 ~~~~~~~~~~~~~a~~~~~~~~~p~vT~kV~fdi~~g~~~~grIvigLfG~~vPKTV~NF~~l~~~~~~~~-------gY 85 (217)
T KOG0880|consen 13 LITARLFPVLNKGASSDKKYEPGPKVTHKVYFDIEIGGEPVGRIVIGLFGKVVPKTVENFRALATSGEKGY-------GY 85 (217)
T ss_pred HhhhheeeeecceeccccccCCCCcceeEEEEEEEECCEeccEEEEEeccccchHHHHHHHHHHccCCCCc-------cc
Confidence 33333444443334443345677889999999999999999999999999999999999999998 55544 59
Q ss_pred cCCEEEEecCCceEeecCCcCCCCCCCcccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcE
Q 028464 91 KGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVV 170 (208)
Q Consensus 91 ~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~v 170 (208)
.+++||||+|||+|||||...+++.++.++||++++||++.++|+++|.|||++.+|+++|||||||+...||||++|+|
T Consensus 86 ~gS~FhRVi~nfmIQGGd~t~g~gtGg~SIyG~~F~DENf~LkH~rpG~lSMAn~GpDtNGsQFfItT~~t~wLDGkhVV 165 (217)
T KOG0880|consen 86 KGSKFHRVIPNFMIQGGDFTKGDGTGGKSIYGEKFPDENFKLKHDRPGRLSMANAGPDTNGSQFFITTVKTPWLDGKHVV 165 (217)
T ss_pred CCceeeeeecCceeecCccccCCCCCCeEeecCCCCCccceeecCCCceEeeeccCCCCCCceEEEEecCCccccCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCHHHHHHHHhCCCC-CCCcccceEEEeeeeecC
Q 028464 171 FGKVLSGMDVVRKIEAEGRQ-SGEPKSKVVISNSGEMAL 208 (208)
Q Consensus 171 fG~Vi~G~~vl~~I~~~~~~-~~~P~~~i~I~~cg~l~~ 208 (208)
||+|++|||++.+|+...++ +++|.++++|.+||+|+.
T Consensus 166 FGqVl~Gmdvv~~Ie~~~TD~~dkP~e~v~I~~~g~l~~ 204 (217)
T KOG0880|consen 166 FGQVLEGMDVVRKIENVKTDERDKPLEDVVIANCGELPV 204 (217)
T ss_pred EeeehhhHHHHHHHHhcccCCCCCccccEEEeecCcccc
Confidence 99999999999999999764 689999999999999863
No 2
>KOG0546 consensus HSP90 co-chaperone CPR7/Cyclophilin [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-55 Score=373.21 Aligned_cols=171 Identities=63% Similarity=1.060 Sum_probs=164.4
Q ss_pred cccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCc-ccCCCcccccCCEEEEecCCceEeecCCcCCCCC
Q 028464 37 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGI-GKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 115 (208)
Q Consensus 37 ~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~-~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 115 (208)
.+|+|||||.|++.+.|||+||||.|.||+||+||+.||+|++|. ...++.+.|+|+.||||+++|||||||+..++|+
T Consensus 7 ~~pr~ffDISI~ge~~GRIvfeLf~dv~PKTaENFraLCtGE~G~~~~~gk~L~YKG~~FHRViK~FMiQgGDfs~gnGt 86 (372)
T KOG0546|consen 7 TNPRVFFDISIGGEPAGRIVFELFNDVVPKTAENFRALCTGEKGGGLTTGKPLHYKGSRFHRVIKNFMIQGGDFSEGNGT 86 (372)
T ss_pred CCceEEEEEEeCCcccceEEEEeecccCchhHHHHHHHhccccCCCCCCCCeeeecCchhheeeecceeeccccccCCCC
Confidence 469999999999999999999999999999999999999999985 4568999999999999999999999999999999
Q ss_pred CCcccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCC-CCc
Q 028464 116 GGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS-GEP 194 (208)
Q Consensus 116 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~-~~P 194 (208)
||++|||..|.||++.++|+++++||||+.|||+||||||||..+.||||+.|+|||+||+|++|++.|++..++. .+|
T Consensus 87 GGeSIYG~~FdDEnF~lKHdrpflLSMAN~GpNTNgSQFFITT~p~PHLdGkHVVFGqVI~G~~VVr~IEn~~~d~~skP 166 (372)
T KOG0546|consen 87 GGESIYGEKFDDENFELKHDRPFLLSMANRGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGKEVVREIENLETDEESKP 166 (372)
T ss_pred CcccccccccccccceeccCcchhhhhhcCCCCCCCcceEEeCCCCCCcCCceeEEeeEeechhHHHHHhccccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998665 589
Q ss_pred ccceEEEeeeeec
Q 028464 195 KSKVVISNSGEMA 207 (208)
Q Consensus 195 ~~~i~I~~cg~l~ 207 (208)
..+|.|.+||+|.
T Consensus 167 ~~dV~I~dCGel~ 179 (372)
T KOG0546|consen 167 LADVVISDCGELV 179 (372)
T ss_pred ccceEeccccccc
Confidence 9999999999985
No 3
>PTZ00060 cyclophilin; Provisional
Probab=100.00 E-value=2.8e-49 Score=316.41 Aligned_cols=169 Identities=65% Similarity=1.084 Sum_probs=156.7
Q ss_pred ccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCC
Q 028464 38 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 117 (208)
Q Consensus 38 ~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 117 (208)
+++||||+++++++.|+|+||||.+.||++|+||++||+|...+. .|+.++|+++.||||+|+++||+||+..+++.++
T Consensus 15 ~~~v~~di~i~~~~~G~ivIeL~~d~aP~t~~nF~~L~~g~~~~~-~g~~~~Y~~~~fhRvi~~~~iqgGd~~~~~g~~g 93 (183)
T PTZ00060 15 RPKVFFDISIDNAPAGRIVFELFSDVTPKTAENFRALCIGDKVGS-SGKNLHYKGSIFHRIIPQFMCQGGDITNHNGTGG 93 (183)
T ss_pred CCEEEEEEEECCEeCceEEEEEcCCCCcHHHHHHHHHhcCCcccc-cCcccccCCeEEEEEcCCCeEEeCCccCCCCCCC
Confidence 578999999999999999999999999999999999998765432 3467799999999999999999999876777888
Q ss_pred cccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCcccc
Q 028464 118 ESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSK 197 (208)
Q Consensus 118 ~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~P~~~ 197 (208)
.++++..+++|...+.|+++|+|+|+++++++++|||||++.+.|+||++|+|||||++|||||++|++.++++++|+++
T Consensus 94 ~~~~g~~~~~e~~~~~h~~~G~lsma~~g~~~~~sqFfIt~~~~~~Ldg~~tvFG~Vi~G~dvl~~I~~~~~~~~~P~~~ 173 (183)
T PTZ00060 94 ESIYGRKFTDENFKLKHDQPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVIEGMEVVRAMEKEGTQSGYPKKP 173 (183)
T ss_pred CcccccccCCccccccCCCCCEEEeccCCCCCCcceEEEEeCCCcccCCCccEEEEEEccHHHHHHHHccCCCCCCCcCC
Confidence 88888888999888999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred eEEEeeeeec
Q 028464 198 VVISNSGEMA 207 (208)
Q Consensus 198 i~I~~cg~l~ 207 (208)
|+|++||+|.
T Consensus 174 v~I~~cg~~~ 183 (183)
T PTZ00060 174 VVVTDCGELQ 183 (183)
T ss_pred eEEEEeEEcC
Confidence 9999999983
No 4
>cd01926 cyclophilin_ABH_like cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. These enzymes have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. As cyclophilins, Human hCyP-A, human cyclophilin-B (hCyP-19), S. cerevisiae Cpr1 and C. elegans Cyp-3, are inhibited by the immunosuppressive drug cyclopsporin A (CsA). CsA binds to the PPIase active site. Cyp-3. S. cerevisiae Cpr1 interacts with the Rpd3 - Sin3 complex and in addition is a component of the Set3 complex. S. cerevisiae Cpr1 has also been shown to have a role in Zpr1p nuclear transport. Human cyclophilin H associates with the [U4/U6.U5] tri-snRNP particles of the spl
Probab=100.00 E-value=3.8e-49 Score=310.84 Aligned_cols=164 Identities=74% Similarity=1.259 Sum_probs=152.3
Q ss_pred cEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCc
Q 028464 39 HKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGE 118 (208)
Q Consensus 39 ~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~ 118 (208)
|+||||+.++++++|+|+||||.+.||++|+||++||++.++++. +..+|+++.||||+|+++||+||+..+++.++.
T Consensus 1 p~v~~di~i~~~~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~~--~~~~Y~~~~f~Rv~~~~~iq~Gd~~~~~g~~~~ 78 (164)
T cd01926 1 PKVFFDITIGGEPAGRIVMELFADVVPKTAENFRALCTGEKGKGG--KPFGYKGSTFHRVIPDFMIQGGDFTRGNGTGGK 78 (164)
T ss_pred CEEEEEEeECCeeceeEEEEEeCCCCCHHHHHHHHHhcccCCCcc--cccccCCCEEEEEeCCcEEEcCCccCCCCCCCC
Confidence 579999999999999999999999999999999999987655432 445899999999999999999998767778888
Q ss_pred ccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCcccce
Q 028464 119 SIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKV 198 (208)
Q Consensus 119 ~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~P~~~i 198 (208)
++++..+++|...++|+++|+|+|++.++++++|||||++++.|+||++|+|||||++|||||++|++.++++++|+++|
T Consensus 79 ~~~g~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfIt~~~~~~Ld~~~tvFG~V~~G~dvl~~i~~~~~~~~~P~~~i 158 (164)
T cd01926 79 SIYGEKFPDENFKLKHTGPGLLSMANAGPNTNGSQFFITTVKTPWLDGKHVVFGKVVEGMDVVKKIENVGSGNGKPKKKV 158 (164)
T ss_pred cccCCccCCCCccccCCCccEEEeeECCCCCcccEEEEEeCCCCccCCcccEEEEEEEcHHHHHHHHcCCCCCCCCcCCe
Confidence 88898899998889999999999999999999999999999999999999999999999999999999988788999999
Q ss_pred EEEeee
Q 028464 199 VISNSG 204 (208)
Q Consensus 199 ~I~~cg 204 (208)
+|.+||
T Consensus 159 ~I~~cG 164 (164)
T cd01926 159 VIADCG 164 (164)
T ss_pred EEEECC
Confidence 999998
No 5
>PLN03149 peptidyl-prolyl isomerase H (cyclophilin H); Provisional
Probab=100.00 E-value=1.2e-47 Score=307.53 Aligned_cols=167 Identities=59% Similarity=1.006 Sum_probs=151.8
Q ss_pred ccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCC
Q 028464 38 THKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG 117 (208)
Q Consensus 38 ~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 117 (208)
++++|||+.+++++.|+|+||||.+.||++|+||++||+++.. +.+....|+++.||||+++++||+||+..+++.++
T Consensus 18 ~~~v~~di~~~~~~~G~i~ieL~~~~aP~t~~NF~~Lc~g~~~--~~g~~~~Y~~~~fhrVi~~f~iqgGd~~~~~g~g~ 95 (186)
T PLN03149 18 NPVVFFDVTIGGIPAGRIKMELFADIAPKTAENFRQFCTGEFR--KAGLPQGYKGCQFHRVIKDFMIQGGDFLKGDGTGC 95 (186)
T ss_pred CCEEEEEEeeCCcccccEEEEEcCCCCcHHHHHHHHHHhhhcc--ccCcccccCCcEEEEEcCCcEEEcCCcccCCCCCc
Confidence 4689999999999999999999999999999999999987632 11122249999999999999999999877788888
Q ss_pred cccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEE-cCHHHHHHHHhCCC-CCCCcc
Q 028464 118 ESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIEAEGR-QSGEPK 195 (208)
Q Consensus 118 ~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi-~G~~vl~~I~~~~~-~~~~P~ 195 (208)
.++++..+++|.....|+++|+|+|+++++++++|||||++.+.|+||++|+|||||+ +|||||++|++.++ ++++|+
T Consensus 96 ~~~~g~~f~~e~~~~~h~~~G~lsma~~g~~s~~sqFfIt~~~~p~Ldg~~tVFG~Vi~eG~dvl~~I~~~~~~~~~~P~ 175 (186)
T PLN03149 96 VSIYGSKFEDENFIAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPK 175 (186)
T ss_pred ccccCCccCCcccccccCCCCEEEEeeCCCCCcccEEEEECCCCCccCCCceEEEEEEECcHHHHHHHHcCCCCCCCCCc
Confidence 8889988999988889999999999999999999999999999999999999999999 79999999999987 568999
Q ss_pred cceEEEeeeee
Q 028464 196 SKVVISNSGEM 206 (208)
Q Consensus 196 ~~i~I~~cg~l 206 (208)
++|+|.+||++
T Consensus 176 ~~i~I~~cG~~ 186 (186)
T PLN03149 176 LACVISECGEM 186 (186)
T ss_pred CCeEEEeCEeC
Confidence 99999999985
No 6
>KOG0879 consensus U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-48 Score=287.29 Aligned_cols=170 Identities=58% Similarity=0.999 Sum_probs=161.1
Q ss_pred cccccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCC
Q 028464 35 EKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDG 114 (208)
Q Consensus 35 ~~~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 114 (208)
++.++-||||+++.+.++|||.||||.|.+|++++||.+.|+|+-- +.|+..-|+++.||||+++|+|||||...+||
T Consensus 7 ~~~nPvVF~dv~igg~~~GrikieLFadivPkTAENFRQFCTGE~r--~~g~PiGYK~~tFHRvIkdFMiQgGDFv~gDG 84 (177)
T KOG0879|consen 7 SPNNPVVFFDVAIGGRPIGRIKIELFADIVPKTAENFRQFCTGEYR--KDGVPIGYKNSTFHRVIKDFMIQGGDFVNGDG 84 (177)
T ss_pred CCCCCeEEEEEeeCCEEcceEEEEEeeccChhhHHHHHhhcccccc--cCCccccccccchHHHhhhheeccCceecCCC
Confidence 4458899999999999999999999999999999999999998732 45677889999999999999999999999999
Q ss_pred CCCcccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCC-CCCC
Q 028464 115 RGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGE 193 (208)
Q Consensus 115 ~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~-~~~~ 193 (208)
++-.++|+.+++||++.++|+.+|+|||++++++++|.|||||.....+||++|+|||||++|+.++++|+++++ .+++
T Consensus 85 tG~~sIy~~~F~DENFtlkH~~PGlLSMANsG~~tNGCQFFITcakcdfLD~KHVVFGrvldGlli~rkIEnvp~G~Nnk 164 (177)
T KOG0879|consen 85 TGVASIYGSTFPDENFTLKHDGPGLLSMANSGKDTNGCQFFITCAKCDFLDGKHVVFGRVLDGLLIMRKIENVPTGPNNK 164 (177)
T ss_pred ceEEEEcCCCCCCcceeeecCCCceeeccccCCCCCCceEEEEecccccccCceEEEeeeehhhhhhhhhhcCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986 5789
Q ss_pred cccceEEEeeeee
Q 028464 194 PKSKVVISNSGEM 206 (208)
Q Consensus 194 P~~~i~I~~cg~l 206 (208)
|+.+|.|+.||++
T Consensus 165 PKl~v~i~qCGem 177 (177)
T KOG0879|consen 165 PKLPVVIVQCGEM 177 (177)
T ss_pred CCCcEEEeecccC
Confidence 9999999999975
No 7
>PTZ00221 cyclophilin; Provisional
Probab=100.00 E-value=1.1e-46 Score=311.58 Aligned_cols=170 Identities=36% Similarity=0.541 Sum_probs=152.6
Q ss_pred ccccccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCccc-CCCcccccCCEEEEecCC-ceEeecCCcC
Q 028464 34 LEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGK-SGKPLYYKGSSFHRIIPS-FMIQGGDFTL 111 (208)
Q Consensus 34 ~~~~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~-~~~~~~Y~g~~f~rv~~~-~~iq~G~~~~ 111 (208)
.+..+++||||+.+++.+.|+|+||||.+.||++|+||++||+|+.+.+. .|....|+++.||||+++ ++||+||+..
T Consensus 48 ~~~~~~rVfldisig~~~~GrIvIELf~d~aP~T~eNF~~Lc~g~~g~~~~~g~k~~Y~gt~FhRVi~~~f~iqgGD~~~ 127 (249)
T PTZ00221 48 EEQNSCRAFLDISIGDVLAGRLVFELFEDVVPETVENFRALITGSCGIDTNTGVKLDYLYTPVHHVDRNNNIIVLGELDS 127 (249)
T ss_pred cCCCCCEEEEEEeeCCeecceEEEEEeCCCCcHHHHHHHHHhhcccccccccCcccccCCCEEEEEeCCCCEEEeCCCCC
Confidence 34568999999999999999999999999999999999999998876432 344456999999999985 8999999763
Q ss_pred CCCCCCcccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCC-C
Q 028464 112 GDGRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-Q 190 (208)
Q Consensus 112 ~~~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~-~ 190 (208)
.+.+++|..+++|.+..+|+++|+|+|++.++++++||||||+.++|+||++|+|||+|++|||||++|++.++ +
T Consensus 128 ----~g~s~~G~~f~dE~~~~~h~~~G~LsMan~GpntngSQFfITl~~~p~LDgk~vVFGrVveGmdVv~kIe~v~~d~ 203 (249)
T PTZ00221 128 ----FNVSSTGTPIADEGYRHRHTERGLLTMISEGPHTSGSVFGITLGPSPSLDFKQVVFGKAVDDLSLLEKLESLPLDD 203 (249)
T ss_pred ----CCccCCCCcccCccccccCCCCCEEEeCcCCCCCccceEEEECCCCCccCCCceEEEEEEeCHHHHHHHHcCCcCC
Confidence 23456788899999999999999999999999999999999999999999999999999999999999999975 5
Q ss_pred CCCcccceEEEeeeeec
Q 028464 191 SGEPKSKVVISNSGEMA 207 (208)
Q Consensus 191 ~~~P~~~i~I~~cg~l~ 207 (208)
+++|.++|+|.+||+|+
T Consensus 204 ~grP~~~V~I~~Cgvl~ 220 (249)
T PTZ00221 204 VGRPLLPVTVSFCGALT 220 (249)
T ss_pred CCCCCCCeEEEECeEec
Confidence 78999999999999986
No 8
>KOG0881 consensus Cyclophilin type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.5e-46 Score=272.66 Aligned_cols=152 Identities=51% Similarity=0.887 Sum_probs=141.7
Q ss_pred cEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCc
Q 028464 39 HKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGE 118 (208)
Q Consensus 39 ~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~ 118 (208)
+.|+++ |++|.|++|||-+.||++|+||.+|+ +++||+|..||||+++|+||||||. +.|+++.
T Consensus 10 ~~V~Le-----TsmG~i~~ElY~kHaP~TC~NF~eLa----------rrgYYn~v~FHRii~DFmiQGGDPT-GTGRGGa 73 (164)
T KOG0881|consen 10 PNVTLE-----TSMGKITLELYWKHAPRTCQNFAELA----------RRGYYNGVIFHRIIKDFMIQGGDPT-GTGRGGA 73 (164)
T ss_pred CeEEEe-----ecccceehhhhhhcCcHHHHHHHHHH----------hcccccceeeeehhhhheeecCCCC-CCCCCcc
Confidence 556666 78999999999999999999999999 6779999999999999999999998 8999999
Q ss_pred cccccccccccc-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCccc
Q 028464 119 SIFGESFADENF-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKS 196 (208)
Q Consensus 119 ~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~P~~ 196 (208)
++||..+.||-. .++|..+|.|+|++.+|++++|||||||.+.++||++|++||||+.||+|++++-.+.++ ++||+.
T Consensus 74 SIYG~kF~DEi~~dLkhTGAGILsMANaGPnTNgSQFFiTLAPt~~LDGKHTIFGRV~~Gm~vikr~G~v~Td~~DRPi~ 153 (164)
T KOG0881|consen 74 SIYGDKFEDEIHSDLKHTGAGILSMANAGPNTNGSQFFITLAPTQWLDGKHTIFGRVCSGMEVIKRMGMVETDNSDRPID 153 (164)
T ss_pred ccccchhhhhhhhhhcccchhhhhhhccCCCCCCceEEEEecCccccCCcceeehhhhhhHHHHHhhcceecCCCCCCcc
Confidence 999999999965 689999999999999999999999999999999999999999999999999999988765 589999
Q ss_pred ceEEEeeeee
Q 028464 197 KVVISNSGEM 206 (208)
Q Consensus 197 ~i~I~~cg~l 206 (208)
+++|.+.-.+
T Consensus 154 ~~kIika~~~ 163 (164)
T KOG0881|consen 154 EVKIIKAYPS 163 (164)
T ss_pred ceeeEeeecC
Confidence 9999987654
No 9
>cd01923 cyclophilin_RING cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal cyclophilin Human cyclophilin A exhibit reduced peptidylprolyl cis- trans isomerase activity and lack a residue important for cyclophilin binding. Human hCyP-60 has been shown to physically interact with the proteinase inhibitor peptide eglin c and; C. elegans MOG-6 to physically interact with MEP-1, a nuclear zinc finger protein. MOG-6 has been shown to function in germline sex determination.
Probab=100.00 E-value=2.5e-44 Score=282.05 Aligned_cols=147 Identities=48% Similarity=0.816 Sum_probs=136.3
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|+||||.+.||++|+||++||+ .++|+++.||||+|++++|+||+. +++.++.++++..+++|.
T Consensus 6 T~~G~i~ieL~~~~aP~t~~nF~~L~~----------~g~Y~~~~f~rv~~~~~iq~Gd~~-~~g~~~~~~~g~~~~~E~ 74 (159)
T cd01923 6 TNKGDLNLELHCDKAPKACENFIKLCK----------KGYYDGTIFHRSIRNFMIQGGDPT-GTGRGGESIWGKPFKDEF 74 (159)
T ss_pred EccccEEEEEeCCCChHHHHHHHHHHh----------cCccCCcEEEEEeCCcEEEecccC-CCCCCCccccCCccCccc
Confidence 789999999999999999999999994 449999999999999999999986 677888888888888885
Q ss_pred c-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCC-CCCCcccceEEEeeeeec
Q 028464 130 F-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGEPKSKVVISNSGEMA 207 (208)
Q Consensus 130 ~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~-~~~~P~~~i~I~~cg~l~ 207 (208)
. .++|+++|+|+|+++++++++|||||++++.|+||++|+|||||++|||+|++|++.++ ++++|+++|+|.+|+++.
T Consensus 75 ~~~~~h~~~G~v~ma~~~~~s~~sqFfIt~~~~~~Ld~~~~vFG~V~~G~~vl~~I~~~~~~~~~~P~~~i~I~~~~i~~ 154 (159)
T cd01923 75 KPNLSHDGRGVLSMANSGPNTNGSQFFITYRSCKHLDGKHTVFGRVVGGLETLEAMENVPDPGTDRPKEEIKIEDTSVFV 154 (159)
T ss_pred ccCcCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCCCCeEEEEeEEEe
Confidence 4 57888999999999999999999999999999999999999999999999999999875 568999999999999875
No 10
>COG0652 PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-44 Score=279.41 Aligned_cols=145 Identities=50% Similarity=0.796 Sum_probs=130.5
Q ss_pred CEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCccccccccccc
Q 028464 49 GKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADE 128 (208)
Q Consensus 49 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 128 (208)
.|+.|+|+||||++.||+||+||++|| +.+||+|+.||||+++|||||||+..+++.+++ ++.+++|
T Consensus 5 ~t~~G~I~ieL~~~~aP~Tv~NF~~l~----------~~g~Ydg~~FHRVi~~FmiQgGd~~~~~g~gg~---~~~f~~E 71 (158)
T COG0652 5 ETNKGDITIELYPDKAPKTVANFLQLV----------KEGFYDGTIFHRVIPGFMIQGGDPTGGDGTGGP---GPPFKDE 71 (158)
T ss_pred eccCCCEEEEECCCcCcHHHHHHHHHH----------HcCCCCCceEEEeecCceeecCCCCCCCCCCCC---CCCCccc
Confidence 378999999999999999999999999 455999999999999999999999976677777 4789999
Q ss_pred ccccccCC--CeEEEEeecC-CCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-----CCCcccceEE
Q 028464 129 NFKLKHTG--PGVLSMANAG-PDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-----SGEPKSKVVI 200 (208)
Q Consensus 129 ~~~~~~~~--~G~l~~~~~~-~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-----~~~P~~~i~I 200 (208)
.+...|++ +|+||||+.+ |++++|||||++.+.|+||++|+|||+|++|||+|++|++..+. .+.|..+++|
T Consensus 72 ~~~~~~~~~~~G~lsMA~~g~P~t~~SQFFI~~~~~~~Ld~~ytVFG~Vv~GmdvvdkI~~~~~~~~~~~~~~~~~~~~i 151 (158)
T COG0652 72 NFALNGDRHKRGTLSMARAGDPNSNGSQFFITVVDNPFLDGKYTVFGQVVEGMDVVDKIKNGDTDDSGYVQDVPADPVKI 151 (158)
T ss_pred ccccccccCCcceEeEcccCCcCCccCeEEEEecCCcccCCCCcEEEEEehhHHHHHHHHcCCccCCCcccCCCCCCeEE
Confidence 88877777 9999999998 99999999999999999999999999999999999999987543 2467788888
Q ss_pred Eeeeee
Q 028464 201 SNSGEM 206 (208)
Q Consensus 201 ~~cg~l 206 (208)
.+.+++
T Consensus 152 ~~~~~~ 157 (158)
T COG0652 152 LSVKIV 157 (158)
T ss_pred eeeeee
Confidence 887765
No 11
>cd01927 cyclophilin_WD40 cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the protein is not known.
Probab=100.00 E-value=6.9e-44 Score=276.44 Aligned_cols=142 Identities=55% Similarity=0.879 Sum_probs=131.9
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|++|+|+||||.+.||++|+||++||+ .++|+++.||||+|+|++|+||+. +++.++.++++..+++|.
T Consensus 4 T~~G~i~ieL~~~~aP~t~~nF~~L~~----------~g~Y~~~~f~Rvi~~f~iq~Gd~~-~~g~g~~~~~~~~~~~e~ 72 (148)
T cd01927 4 TTKGDIHIRLFPEEAPKTVENFTTHAR----------NGYYNNTIFHRVIKGFMIQTGDPT-GDGTGGESIWGKEFEDEF 72 (148)
T ss_pred eccccEEEEEeCCCCcHHHHHHHHHhh----------cCCcCCcEEEEEcCCcEEEecccC-CCCCCCCcccCCcccccc
Confidence 789999999999999999999999994 449999999999999999999986 677888888888899987
Q ss_pred c-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCC-CCCCcccceEEEe
Q 028464 130 F-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGEPKSKVVISN 202 (208)
Q Consensus 130 ~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~-~~~~P~~~i~I~~ 202 (208)
. .++|+++|+|+|+++++++++|||||++++.|+||++|+|||||++|||+|++|++.++ ++++|+++|+|.+
T Consensus 73 ~~~~~h~~~G~l~ma~~~~~s~~SqFfIt~~~~p~Ldg~~tvFG~V~~G~dvl~~I~~~~~~~~~~P~~~i~I~~ 147 (148)
T cd01927 73 SPSLKHDRPYTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQRIENVKTDKNDRPYEDIKIIN 147 (148)
T ss_pred ccccCcCCCeEEEEeeCCCCCCCceEEEEcCCCcccCCCceEEEEEEcCHHHHHHHHcCCCCCCCCCcCCeEEEe
Confidence 6 78898899999999999999999999999999999999999999999999999999986 5689999999986
No 12
>cd01928 Cyclophilin_PPIL3_like Cyclophilin_PPIL3_like. Proteins similar to Human cyclophilin-like peptidylprolyl cis- trans isomerase (PPIL3). Members of this family lack a key residue important for cyclosporin binding: the tryptophan residue corresponding to W121 in human hCyP-18a; most members have a histidine at this position. The exact function of the protein is not known.
Probab=100.00 E-value=1.1e-43 Score=276.74 Aligned_cols=144 Identities=47% Similarity=0.781 Sum_probs=133.2
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|+||||++.||++|+||++||++ ++|+++.|||+++++++|+||+. +++.++.++++..+++|.
T Consensus 7 T~~G~i~ieL~~~~aP~t~~nF~~L~~~----------g~Y~~~~f~rv~~~f~iq~Gd~~-~~g~g~~~~~~~~~~~e~ 75 (153)
T cd01928 7 TNLGDIKIELFCDDCPKACENFLALCAS----------GYYNGCIFHRNIKGFMVQTGDPT-GTGKGGESIWGKKFEDEF 75 (153)
T ss_pred EccccEEEEEcCCCCcHHHHHHHHHHhc----------CccCCcEEEEeCCCCEEEccccC-CCCCCCCccCCCcccccc
Confidence 7899999999999999999999999954 49999999999999999999986 667778888888898887
Q ss_pred c-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCC-CCCCcccceEEEeee
Q 028464 130 F-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGEPKSKVVISNSG 204 (208)
Q Consensus 130 ~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~-~~~~P~~~i~I~~cg 204 (208)
. .++|+++|+|+|+++++++++|||||++++.|+||++|+|||||++|||+|++|++.++ ++++|+.+|+|.+|.
T Consensus 76 ~~~~~~~~~G~v~ma~~~~~~~~SqFfI~~~~~~~Ld~~~tvFG~V~~G~dvl~~I~~~~~~~~~~P~~~i~I~~~~ 152 (153)
T cd01928 76 RETLKHDSRGVVSMANNGPNTNGSQFFITYAKQPHLDGKYTVFGKVIDGFETLDTLEKLPVDKKYRPLEEIRIKDVT 152 (153)
T ss_pred ccCCCcCCCcEEEEeeCCCCCcccEEEEEeCCCcccCCCceEEEEEEeCHHHHHHHHcCCCCCCCCCcCCeEEEEeE
Confidence 5 57888999999999999999999999999999999999999999999999999999976 568999999999984
No 13
>cd01922 cyclophilin_SpCYP2_like cyclophilin_SpCYP2_like: cyclophilin 2-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to Schizosaccharomyces pombe cyp-2. These proteins bind their respective SNW chromatin binding protein in autologous systems, in a CsA independent manner indicating interaction with a surface outside the PPIase active site. SNW proteins play a basic and broad range role in signaling.
Probab=100.00 E-value=6.9e-44 Score=275.79 Aligned_cols=142 Identities=52% Similarity=0.898 Sum_probs=131.6
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|+||||.+.||++|+||++||+ .++|+++.||||+|+|++|+||+. +++.++.++++..+++|.
T Consensus 4 T~~G~i~ieL~~~~aP~t~~nF~~L~~----------~g~Y~~~~f~Rvi~~f~iq~Gd~~-~~g~~~~~~~~~~~~~e~ 72 (146)
T cd01922 4 TTMGEITLELYWNHAPKTCKNFYELAK----------RGYYNGTIFHRLIKDFMIQGGDPT-GTGRGGASIYGKKFEDEI 72 (146)
T ss_pred eccccEEEEEcCCCCcHHHHHHHHHHh----------cCCcCCcEEEEEcCCcEEEecccC-CCCCCcccccCCCccccc
Confidence 789999999999999999999999994 449999999999999999999986 667777888888888884
Q ss_pred -cccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCcccceEEEe
Q 028464 130 -FKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSKVVISN 202 (208)
Q Consensus 130 -~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~P~~~i~I~~ 202 (208)
..++|+++|+|+|+++++++++|||||+++++|+||++|+|||||++|||||++|+++++++++|..+|+|.+
T Consensus 73 ~~~~~h~~~G~l~ma~~~~~s~~sqFfIt~~~~p~Ld~~~tvFG~V~~G~dvl~~I~~~~~~~~~P~~~I~I~~ 146 (146)
T cd01922 73 HPELKHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSKGMKVIENMVEVQTQTDRPIDEVKILK 146 (146)
T ss_pred ccCcCCCCCeEEEEeeCCCCCCccEEEEEcCCCcccCCCCCEEEEEEcCHHHHHHHHhCCCCCCCcCCCeEEeC
Confidence 4688999999999999999999999999999999999999999999999999999999887889999999974
No 14
>cd01921 cyclophilin_RRM cyclophilin_RRM: cyclophilin-type peptidylprolyl cis- trans isomerase domain occuring with a C-terminal RNA recognition motif domain (RRM). This subfamily of the cyclophilin domain family contains a number of eukaryotic cyclophilins having the RRM domain including the nuclear proteins: human hCyP-57, Arabidopsis thaliana AtCYP59, Caenorhabditis elegans CeCyP-44 and Paramecium tetrurelia Kin241. The Kin241 protein has been shown to have a role in cell morphogenesis.
Probab=100.00 E-value=7e-43 Score=275.66 Aligned_cols=147 Identities=39% Similarity=0.649 Sum_probs=130.5
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCccccc-------
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFG------- 122 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~------- 122 (208)
|+.|+|+||||.+.||++|+||++||+ .++|+++.||||+++++|||||+. +++.++.++++
T Consensus 4 Ts~G~i~ieL~~~~aP~t~~nF~~L~~----------~~~Y~g~~fhrvi~~f~iQgGd~~-~~g~~~~~~~~~~~~~~~ 72 (166)
T cd01921 4 TTLGDLVIDLFTDECPLACLNFLKLCK----------LKYYNFCLFYNVQKDFIAQTGDPT-GTGAGGESIYSQLYGRQA 72 (166)
T ss_pred eccCCEEEEEcCCCCCHHHHHHHHHHh----------cCCcCCCEEEEEeCCceEEECCcC-CCCCCCcccccccccccC
Confidence 789999999999999999999999995 349999999999999999999987 55666665553
Q ss_pred ccccccc-cccccCCCeEEEEeecCCCCCCceEEEEccC-CCCCCCCCcEEEEEEcCHHHHHHHHhCCC-CCCCcccceE
Q 028464 123 ESFADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVI-TSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGEPKSKVV 199 (208)
Q Consensus 123 ~~~~~e~-~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~-~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~-~~~~P~~~i~ 199 (208)
..+++|. ..++|+.+|+|+|++.++++++|||||++.+ .|+||++|+|||||++|||||++|++.++ ++++|+++|+
T Consensus 73 ~~~~~e~~~~~~h~~~G~l~ma~~~~~~~~SQFfIt~~~~~~~Ldg~~tvFG~Vi~G~dvv~~I~~~~~~~~~~P~~~i~ 152 (166)
T cd01921 73 RFFEPEILPLLKHSKKGTVSMVNAGDNLNGSQFYITLGENLDYLDGKHTVFGQVVEGFDVLEKINDAIVDDDGRPLKDIR 152 (166)
T ss_pred cccCcccCCccccCCceEEEEeECCCCCccceEEEEcCCCCcccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCCCCeE
Confidence 2355564 3678999999999999999999999999975 79999999999999999999999999876 5689999999
Q ss_pred EEeeeeec
Q 028464 200 ISNSGEMA 207 (208)
Q Consensus 200 I~~cg~l~ 207 (208)
|.+|++|.
T Consensus 153 I~~~~i~~ 160 (166)
T cd01921 153 IKHTHILD 160 (166)
T ss_pred EEEEEEEC
Confidence 99999985
No 15
>PRK10903 peptidyl-prolyl cis-trans isomerase A (rotamase A); Provisional
Probab=100.00 E-value=2.1e-42 Score=277.94 Aligned_cols=145 Identities=33% Similarity=0.512 Sum_probs=125.4
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|+||||++.||++|+||++|| +.+||||+.|||++|+|++|||++....+ ...++..+.+|.
T Consensus 35 T~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Ydg~~FhRvi~~f~iQgG~~~~~~~---~~~~~~~~~~e~ 101 (190)
T PRK10903 35 TSAGNIELELNSQKAPVSVKNFVDYV----------NSGFYNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNPPIKNEA 101 (190)
T ss_pred eccccEEEEEeCCCCcHHHHHHHHHH----------hcCCcCCcEEEEEeCCceEEeCCcCCCCC---CCCCCCcccCcc
Confidence 67999999999999999999999999 44599999999999999999999764321 122345677776
Q ss_pred cccccCCCeEEEEeecC-CCCCCceEEEEccCCCCCCC-----CCcEEEEEEcCHHHHHHHHhCCCC-----CCCcccce
Q 028464 130 FKLKHTGPGVLSMANAG-PDTNGSQFFITTVITSWLDG-----RHVVFGKVLSGMDVVRKIEAEGRQ-----SGEPKSKV 198 (208)
Q Consensus 130 ~~~~~~~~G~l~~~~~~-~~~~~sqF~Itl~~~~~ld~-----~~~vfG~Vi~G~~vl~~I~~~~~~-----~~~P~~~i 198 (208)
....|+.+|+|+|++.+ +++++|||||++++.++||+ +|+|||+|++|||||++|++.+++ +++|.++|
T Consensus 102 ~~~l~~~~G~lama~~~~~~sn~SQFfIt~~~~~~ld~~~~dg~ytvFG~V~eG~dvl~~I~~~~~~~~~~~~~~P~~~v 181 (190)
T PRK10903 102 DNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPV 181 (190)
T ss_pred cccCcCCCcEEEeCCCCCCCCcccEEEEECcCcccccCCccCCCccEEEEEecCHHHHHHHHcCCCCCCCCCCCcccCCe
Confidence 55667889999999975 89999999999999999984 899999999999999999998764 36899999
Q ss_pred EEEeeeeec
Q 028464 199 VISNSGEMA 207 (208)
Q Consensus 199 ~I~~cg~l~ 207 (208)
+|.+|+++.
T Consensus 182 ~I~~~~v~~ 190 (190)
T PRK10903 182 VILSAKVLP 190 (190)
T ss_pred EEEEEEEeC
Confidence 999999873
No 16
>KOG0111 consensus Cyclophilin-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-43 Score=280.63 Aligned_cols=164 Identities=62% Similarity=1.046 Sum_probs=159.3
Q ss_pred cccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCC
Q 028464 37 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRG 116 (208)
Q Consensus 37 ~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 116 (208)
-++.||+++.+.+...|||+++|..|..|.+++||..||+|+.|. -|.|++||||+|.|++||||.++++|++
T Consensus 135 ~~pqv~~~ikig~~~~Gri~~~lrtdv~Pmtaenfr~Lctge~gf-------gykgssfhriip~fmcqggdftn~ngtg 207 (298)
T KOG0111|consen 135 ENPQVYHDIKIGEDRAGRIVMLLRTDVVPMTAENFRCLCTGEAGF-------GYKGSSFHRIIPKFMCQGGDFTNGNGTG 207 (298)
T ss_pred hChHhhhheeecccccceEEEeecccCChhhhhhhhhhccccCcc-------CccccchhhhhhhhhccCCccccCCCCC
Confidence 468899999999999999999999999999999999999999876 4999999999999999999999999999
Q ss_pred CcccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCccc
Q 028464 117 GESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKS 196 (208)
Q Consensus 117 ~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~P~~ 196 (208)
+.++||..+.||++.++|..+|+|+|+++++|++||||||+.....+||++|+|||.|++||+|++++++.+++.++|.+
T Consensus 208 gksiygkkfddenf~lkht~pgtlsmansgantngsqffict~ktdwldgkhvvfghv~eg~~vvrq~e~qgsksgkp~q 287 (298)
T KOG0111|consen 208 GKSIYGKKFDDENFTLKHTMPGTLSMANSGANTNGSQFFICTEKTDWLDGKHVVFGHVVEGMNVVRQVEQQGSKSGKPQQ 287 (298)
T ss_pred CcccccccccccceeeecCCCceeeccccCCCCCCceEEEEecccccccCceeEEeeecchHHHHHHHHhccCCCCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeeeeec
Q 028464 197 KVVISNSGEMA 207 (208)
Q Consensus 197 ~i~I~~cg~l~ 207 (208)
.|+|.+||+++
T Consensus 288 kv~i~~cge~~ 298 (298)
T KOG0111|consen 288 KVKIVECGEIE 298 (298)
T ss_pred EEEEEeccccC
Confidence 99999999974
No 17
>cd01925 cyclophilin_CeCYP16-like cyclophilin_CeCYP16-like: cyclophilin-type peptidylprolyl cis- trans isomerase) (PPIase) domain similar to Caenorhabditis elegans cyclophilin 16. C. elegans CeCYP-16, compared to the archetypal cyclophilin Human cyclophilin A has, a reduced peptidylprolyl cis- trans isomerase activity, is cyclosporin insensitive and shows an altered substrate preference favoring, hydrophobic, acidic or amide amino acids. Most members of this subfamily have a glutamate residue in the active site at the position equivalent to a tryptophan (W121 in Human cyclophilin A), which has been shown to be important for cyclophilin binding.
Probab=100.00 E-value=2.3e-41 Score=268.11 Aligned_cols=156 Identities=40% Similarity=0.666 Sum_probs=139.2
Q ss_pred ccccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCC
Q 028464 36 KVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGR 115 (208)
Q Consensus 36 ~~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 115 (208)
+.+.+|.++ |++|+|+||||.+.||++|+||++||+ .++|+++.||||+++|++|||++. +++.
T Consensus 3 ~~~~~v~i~-----Ts~G~i~ieL~~~~~P~t~~nF~~L~~----------~~~Y~~~~f~Rvi~~f~iQgGd~~-~~g~ 66 (171)
T cd01925 3 PTTGKVILK-----TTAGDIDIELWSKEAPKACRNFIQLCL----------EGYYDNTIFHRVVPGFIIQGGDPT-GTGT 66 (171)
T ss_pred CcccEEEEE-----EccccEEEEEeCCCChHHHHHHHHHHh----------cCCCCCCEEEEEcCCcEEEccccC-CCCc
Confidence 334556555 679999999999999999999999994 449999999999999999999986 6778
Q ss_pred CCccccccccccccc-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEE-cCHHHHHHHHhCCC-CCC
Q 028464 116 GGESIFGESFADENF-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIEAEGR-QSG 192 (208)
Q Consensus 116 ~~~~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi-~G~~vl~~I~~~~~-~~~ 192 (208)
++.++++..+++|.. .++|+++|+|+|+++++++++|||||++++.|+||++|+|||||+ ++++++++|++.++ +++
T Consensus 67 g~~s~~g~~~~~E~~~~~~~~~~G~l~ma~~g~~s~~sqFfIt~~~~~~ldg~~tvFG~V~g~~~~~v~~i~~~~~~~~~ 146 (171)
T cd01925 67 GGESIYGEPFKDEFHSRLRFNRRGLVGMANAGDDSNGSQFFFTLDKADELNNKHTLFGKVTGDTIYNLLKLAEVETDKDE 146 (171)
T ss_pred cCcccCCCccCcccccCcCCCCCcEEEECcCCCCCcccEEEEEcCCCcccCCCceEEEEEEECcHHHHHHHhcCCcCCCC
Confidence 888889988988865 567899999999999999999999999999999999999999999 46889999998875 468
Q ss_pred CcccceEEEeeeeec
Q 028464 193 EPKSKVVISNSGEMA 207 (208)
Q Consensus 193 ~P~~~i~I~~cg~l~ 207 (208)
+|.++|+|.+|++++
T Consensus 147 ~P~~~i~I~~~~i~~ 161 (171)
T cd01925 147 RPVYPPKITSVEVLE 161 (171)
T ss_pred CcCCCeEEEEEEEEc
Confidence 999999999999875
No 18
>KOG0883 consensus Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.4e-42 Score=291.95 Aligned_cols=158 Identities=45% Similarity=0.766 Sum_probs=148.1
Q ss_pred cccccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCC
Q 028464 35 EKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDG 114 (208)
Q Consensus 35 ~~~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 114 (208)
..+.++-|+.+. |+.|.|.+||++|.+|.+|+||++|| +.+||+|+.|||.++|||||||||. |.|
T Consensus 272 ~rvKkkgyvrl~---Tn~G~lNlELhcd~~P~aceNFI~lc----------~~gYYnnt~FHRsIrnFmiQGGDPT-GTG 337 (518)
T KOG0883|consen 272 TRVKKKGYVRLV---TNHGPLNLELHCDYAPRACENFITLC----------KNGYYNNTIFHRSIRNFMIQGGDPT-GTG 337 (518)
T ss_pred ccccccceEEEe---ccCCceeeEeecCcchHHHHHHHHHH----------hcccccchHHHHHHHHHeeeCCCCC-CCC
Confidence 556788899988 66999999999999999999999999 5669999999999999999999998 899
Q ss_pred CCCccccccccccccc-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CC
Q 028464 115 RGGESIFGESFADENF-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SG 192 (208)
Q Consensus 115 ~~~~~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~ 192 (208)
.||.++||.++.||.. .+.|+.||+|||+++|||++||||||++.++.+||++|+|||||+.|+++|.+|++++++ .+
T Consensus 338 ~GGeSiWgKpFkDEf~~~l~H~gRGvlSMANsGpnTNgSQFFItyrsckhLd~KHTIFGrvVGGldtL~amEnve~d~~D 417 (518)
T KOG0883|consen 338 RGGESIWGKPFKDEFCSNLSHDGRGVLSMANSGPNTNGSQFFITYRSCKHLDNKHTIFGRVVGGLDTLTAMENVETDEKD 417 (518)
T ss_pred CCCccccCCccccccCCCCCcCCcceEeeccCCCCCCCceEEEEecchhhccccceeeeeeeccHHHHHHHhcCCCCCCC
Confidence 9999999999999965 799999999999999999999999999999999999999999999999999999999865 58
Q ss_pred CcccceEEEeeeee
Q 028464 193 EPKSKVVISNSGEM 206 (208)
Q Consensus 193 ~P~~~i~I~~cg~l 206 (208)
+|+.+|+|.+.-+.
T Consensus 418 rP~e~I~i~~~~VF 431 (518)
T KOG0883|consen 418 RPKEEIKIEDAIVF 431 (518)
T ss_pred CcccceEEeeeEEe
Confidence 99999999987664
No 19
>PRK10791 peptidyl-prolyl cis-trans isomerase B (rotamase B); Provisional
Probab=100.00 E-value=3.3e-40 Score=259.62 Aligned_cols=144 Identities=35% Similarity=0.573 Sum_probs=122.1
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|+||||++.||++|+||++||+ .+||+++.||||+|+|+||||++..+.+. ..++..+++|.
T Consensus 6 T~~G~i~ieL~~~~aP~t~~nF~~L~~----------~g~Yd~~~fhRvi~~f~iQgGd~~~~~~~---~~~~~~~~~e~ 72 (164)
T PRK10791 6 TNHGDIVIKTFDDKAPETVKNFLDYCR----------EGFYNNTIFHRVINGFMIQGGGFEPGMKQ---KATKEPIKNEA 72 (164)
T ss_pred EccccEEEEEeCCCCcHHHHHHHHHHh----------cCCcCCcEEEEEecCcEEEeCCcCCCCCc---CCCCCCcCCcc
Confidence 789999999999999999999999994 44999999999999999999997543322 12345667775
Q ss_pred cccccCCCeEEEEeecC-CCCCCceEEEEccCCCCCC-------C-CCcEEEEEEcCHHHHHHHHhCCCCC-----CCcc
Q 028464 130 FKLKHTGPGVLSMANAG-PDTNGSQFFITTVITSWLD-------G-RHVVFGKVLSGMDVVRKIEAEGRQS-----GEPK 195 (208)
Q Consensus 130 ~~~~~~~~G~l~~~~~~-~~~~~sqF~Itl~~~~~ld-------~-~~~vfG~Vi~G~~vl~~I~~~~~~~-----~~P~ 195 (208)
....++.+|+|+|++.+ |++++|||||++.+.++|| + +|+|||||++|||||++|++++++. ++|.
T Consensus 73 ~~~~~~~~G~lsma~~~~p~s~~SQFfI~~~~~~~ld~~~~~~d~~~~tvFG~V~eG~dvl~~I~~~~~~~~~~~~~~P~ 152 (164)
T PRK10791 73 NNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPK 152 (164)
T ss_pred cccccCCCcEEEECCCCCcCCccceEEEEecCchhhcccccccCCCCccEEEEEecCHHHHHHHHcCcCCCCCccCCCcC
Confidence 44445679999999985 9999999999999988776 2 6999999999999999999987643 6899
Q ss_pred cceEEEeeeee
Q 028464 196 SKVVISNSGEM 206 (208)
Q Consensus 196 ~~i~I~~cg~l 206 (208)
.+|+|.+|.+.
T Consensus 153 ~~v~I~~~~i~ 163 (164)
T PRK10791 153 EDVIIESVTVS 163 (164)
T ss_pred CCeEEEEEEEe
Confidence 99999999764
No 20
>cd01920 cyclophilin_EcCYP_like cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E. coli cyclophilin A and Streptomyces antibioticus SanCyp18. Compared to the archetypal cyclophilin Human cyclophilin A, these have reduced affinity for cyclosporin A. E. coli cyclophilin A has a similar peptidylprolyl cis- trans isomerase activity to the human cyclophilin A. Most members of this subfamily contain a phenylalanine residue at the position equivalent to Human cyclophilin W121, where a tyrptophan has been shown to be important for cyclophilin binding.
Probab=100.00 E-value=1.9e-39 Score=253.38 Aligned_cols=140 Identities=36% Similarity=0.521 Sum_probs=120.8
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|+||||++.||++|+||++||+ .+||+++.||||+|+|++|+|++....+. ..++..+.+|.
T Consensus 4 T~~G~i~ieL~~~~aP~t~~nF~~L~~----------~g~Yd~~~fhRvi~~f~iQ~Gd~~~~~~~---~~~~~~~~~e~ 70 (155)
T cd01920 4 TSLGDIVVELYDDKAPITVENFLAYVR----------KGFYDNTIFHRVISGFVIQGGGFTPDLAQ---KETLKPIKNEA 70 (155)
T ss_pred ecceeEEEEEeCCCCcHHHHHHHHHHh----------cCCCCCCEEEEEeCCcEEEeCCCCCCCCc---cccCCcccCcc
Confidence 779999999999999999999999994 45999999999999999999998743322 22345667776
Q ss_pred cccccCCCeEEEEeecC-CCCCCceEEEEccCCCCCCC-----CCcEEEEEEcCHHHHHHHHhCCCCC-----CCcccce
Q 028464 130 FKLKHTGPGVLSMANAG-PDTNGSQFFITTVITSWLDG-----RHVVFGKVLSGMDVVRKIEAEGRQS-----GEPKSKV 198 (208)
Q Consensus 130 ~~~~~~~~G~l~~~~~~-~~~~~sqF~Itl~~~~~ld~-----~~~vfG~Vi~G~~vl~~I~~~~~~~-----~~P~~~i 198 (208)
....|+.+|+|+|++++ +++++|||||++++.|+||+ +|+|||+|++|||||++|++++++. ++|+.+|
T Consensus 71 ~~~~~~~~G~v~ma~~~~~~s~~SqFfI~~~~~~~ld~~~~~~~ytvFG~V~eG~dvl~~I~~~~~~~~~~~~~~p~~~v 150 (155)
T cd01920 71 GNGLSNTRGTIAMARTNAPDSATSQFFINLKDNASLDYQNEQWGYTVFGEVTEGMDVVDKIAGVETYSFGSYQDVPVQDV 150 (155)
T ss_pred cccccCCceEEEECCCCCCCCccceEEEECCCchhcCCcccCCCccEEEEEecCHHHHHHHHcCCccCCCCcCCCcCCCe
Confidence 65667889999999975 89999999999999999995 7999999999999999999988643 5899999
Q ss_pred EEEe
Q 028464 199 VISN 202 (208)
Q Consensus 199 ~I~~ 202 (208)
+|.+
T Consensus 151 ~i~~ 154 (155)
T cd01920 151 IIES 154 (155)
T ss_pred EEEE
Confidence 9976
No 21
>PF00160 Pro_isomerase: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; InterPro: IPR002130 Cyclophilin [] is the major high-affinity binding protein in vertebrates for the immunosuppressive drug cyclosporin A (CSA), but is also found in other organisms. It exhibits a peptidyl-prolyl cis-trans isomerase activity (5.2.1.8 from EC) (PPIase or rotamase). PPIase is an enzyme that accelerates protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides []. It is probable that CSA mediates some of its effects via an forming a tight complex with cyclophilin that inhibits the phosphatase activity of calcineurin [], []. Cyclophilin A is a cytosolic and highly abundant protein. The protein belongs to a family of isozymes, including cyclophilins B and C, and natural killer cell cyclophilin-related protein [, , ]. Major isoforms have been found throughout the cell, including the ER, and some are even secreted. The sequences of the different forms of cyclophilin-type PPIases are well conserved. Note: FKBP's, a family of proteins that bind the immunosuppressive drug FK506, are also PPIases, but their sequence is not at all related to that of cyclophilin (see IPR001179 from INTERPRO).; GO: 0003755 peptidyl-prolyl cis-trans isomerase activity, 0006457 protein folding; PDB: 1Z81_A 1IHG_A 1IIP_A 3PMP_B 3O7T_A 2B71_A 1QNG_A 1QNH_A 2HQJ_A 2RMC_G ....
Probab=100.00 E-value=3.9e-39 Score=251.19 Aligned_cols=151 Identities=52% Similarity=0.851 Sum_probs=129.9
Q ss_pred EEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCC-ccc
Q 028464 42 YFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGG-ESI 120 (208)
Q Consensus 42 ~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~-~~~ 120 (208)
|++|++++ +|+|+||||++.||++|+||++||+. ++|+++.|||++|+++||+|++......+. ...
T Consensus 1 ~~~i~t~~--~G~i~ieL~~~~aP~~~~nF~~l~~~----------~~y~g~~f~ri~~~~~i~~G~~~~~~~~~~~~~~ 68 (155)
T PF00160_consen 1 FVDIETSG--LGRIVIELFGDEAPKTVENFLRLCTS----------GFYDGTKFHRIIPNFVIQGGDPTGNGGYGREDST 68 (155)
T ss_dssp EEEEEETT--EEEEEEEEETTTSHHHHHHHHHHHHT----------TSSTTEBEEEEETTTEEEESSTTTSSSSTSEEBT
T ss_pred CEEEEeCC--ccCEEEEEeCCCCcHHHHhhehhhcc----------cccCCceeecccccceeeeeeccCCCCccccccc
Confidence 78898655 99999999999999999999999963 389999999999999999999874433111 122
Q ss_pred cccccccccc-ccccCCCeEEEEeecC--CCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCCcccc
Q 028464 121 FGESFADENF-KLKHTGPGVLSMANAG--PDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGEPKSK 197 (208)
Q Consensus 121 ~~~~~~~e~~-~~~~~~~G~l~~~~~~--~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~P~~~ 197 (208)
.+..+++|.. ...++++|+|+|++.+ +++++|||||++++.|++|++|+|||+|++||++|++|++.++++ +|.++
T Consensus 69 ~~~~~~~E~~~~~~~~~~G~v~~~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~-~p~~~ 147 (155)
T PF00160_consen 69 GGEPIPDEFNPSLLKHRRGLVSMARSGKDPNSNGSQFFITLSDAPHLDGKYTVFGRVIEGMDVLDKIEAGPTDE-RPKQD 147 (155)
T ss_dssp TBSCBSSSGBTTSSSSSTTEEEEEBSSSSTTEBSSEEEEESSCGGGGTTTSEEEEEEEEHHHHHHHHHTSBBTT-EBSST
T ss_pred CccccccccccccccccceeeeecccccCCCCCCceEEeeccCCCccccceeeeeEEehhHHHHHHHHCCCCCC-ccCCC
Confidence 3345778874 4455589999999975 888999999999999999999999999999999999999998877 99999
Q ss_pred eEEEeeee
Q 028464 198 VVISNSGE 205 (208)
Q Consensus 198 i~I~~cg~ 205 (208)
|+|.+||+
T Consensus 148 v~I~~cgv 155 (155)
T PF00160_consen 148 VTISSCGV 155 (155)
T ss_dssp EEEEEEEE
T ss_pred eEEEEeEC
Confidence 99999996
No 22
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.6e-40 Score=283.05 Aligned_cols=144 Identities=53% Similarity=0.861 Sum_probs=136.8
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|.+.||+++||++|+||-..| +++||||..||||+++||||+|||. |+|.||+++||+.++||.
T Consensus 411 tt~gdi~~kl~p~ecpktvenf~th~----------rngyy~~~~fhriik~fmiqtgdp~-g~gtggesiwg~dfedef 479 (558)
T KOG0882|consen 411 TTQGDIHIKLYPEECPKTVENFTTHS----------RNGYYDNHTFHRIIKGFMIQTGDPL-GDGTGGESIWGKDFEDEF 479 (558)
T ss_pred ecccceEEEecccccchhhhhhhccc----------cCccccCcchHHhhhhheeecCCCC-CCCCCCcccccccchhhc
Confidence 78899999999999999999999999 6669999999999999999999998 999999999999999997
Q ss_pred c-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCC-CCCCcccceEEEeee
Q 028464 130 F-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGR-QSGEPKSKVVISNSG 204 (208)
Q Consensus 130 ~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~-~~~~P~~~i~I~~cg 204 (208)
+ .++|+++-+|||++.|||++|||||||..+.|+||++|+|||||+.||||+.+|+++.+ +++||.+++.|.+--
T Consensus 480 h~~lrhdrpft~smanag~ntngsqffit~~~tpwld~khtvfgrv~~gm~vvqri~~v~t~k~drp~e~v~iinis 556 (558)
T KOG0882|consen 480 HPNLRHDRPFTVSMANAGPNTNGSQFFITTVPTPWLDGKHTVFGRVTAGMDVVQRIEQVKTDKYDRPYEDVKIINIS 556 (558)
T ss_pred CcccccCCCceEEecccCCCCCCceEEEEecCccccCCcceeEEEEecchhHHhHhhhcccCcCCCCCCceeEEEEe
Confidence 6 69999999999999999999999999999999999999999999999999999999975 569999999998753
No 23
>KOG0884 consensus Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-39 Score=233.37 Aligned_cols=144 Identities=47% Similarity=0.727 Sum_probs=133.5
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|..|+|.||+|.+.+|++|+||+.+|.. .||+++.|||-+|+|++|+|++. ..|.||.++||..++||.
T Consensus 7 t~~gdikiev~~e~tpktce~~l~~~~~----------~~~n~~~~~~~~~~f~v~~~~~~-~tgrgg~siwg~~fede~ 75 (161)
T KOG0884|consen 7 TDVGDIKIEVFCERTPKTCENFLALCAS----------DYYNGCIFHRNIKGFMVQTGDPT-HTGRGGNSIWGKKFEDEY 75 (161)
T ss_pred eccCcEEEEEEecCChhHHHHHHHHhhh----------hhccceeecCCCCCcEEEeCCCC-CCCCCCccccCCcchHHH
Confidence 5689999999999999999999999943 39999999999999999999998 789999999999999996
Q ss_pred c-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCC--CCcccceEEEeee
Q 028464 130 F-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQS--GEPKSKVVISNSG 204 (208)
Q Consensus 130 ~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~--~~P~~~i~I~~cg 204 (208)
. -++|+-||.++|++.+|++++||||||.+.+||||-+|++||+||+|+|.||+|++.+.++ .||..++.|.+.-
T Consensus 76 ~~~lkh~~rg~vsmanngp~tn~sqffity~kq~hldmkytvfgkvidg~etldele~l~v~~ktyrpl~~~~ik~it 153 (161)
T KOG0884|consen 76 SEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDIT 153 (161)
T ss_pred HHHHhhccceeEEcccCCCCCCCceEEEEecCCCccceeEeeeeeeccchhhHHHHhhcccCccccccchheeeeeeE
Confidence 5 5899999999999999999999999999999999999999999999999999999998543 6899988887754
No 24
>cd00317 cyclophilin cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP
Probab=100.00 E-value=5.4e-38 Score=242.54 Aligned_cols=141 Identities=60% Similarity=0.935 Sum_probs=125.4
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccc
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADEN 129 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 129 (208)
|+.|+|+||||++.||++|+||++||+++ +|+++.|||++|++++|+|++......+ +.++..+++|.
T Consensus 4 T~~G~i~IeL~~~~~P~~~~nF~~l~~~~----------~Y~~~~f~rv~~~~~iq~Gd~~~~~~~~--~~~~~~~~~E~ 71 (146)
T cd00317 4 TTKGRIVIELYGDEAPKTVENFLSLARGG----------FYDGTTFHRVIPGFMIQGGDPTGTGGGG--SGPGYKFPDEN 71 (146)
T ss_pred eccCcEEEEEcCCCChHHHHHHHHHHhcC----------CcCCCEEEEEeCCCeEEECCCCCCCCCC--CcCCCccCCcc
Confidence 67899999999999999999999999543 8999999999999999999987443322 34466788887
Q ss_pred cccc-cCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCcccceEEEe
Q 028464 130 FKLK-HTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKSKVVISN 202 (208)
Q Consensus 130 ~~~~-~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~P~~~i~I~~ 202 (208)
.... |+++|+|+|++.++++++|||||++++.|+||++|+|||||++|||+|++|++.+++ +++|.++|+|.+
T Consensus 72 ~~~~~~~~~G~v~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~~P~~~i~I~~ 146 (146)
T cd00317 72 FPLKYHHRRGTLSMANAGPNTNGSQFFITTAPTPHLDGKHTVFGKVVEGMDVVDKIERGDTDENGRPIKPVTISD 146 (146)
T ss_pred ccCcCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEeCCHHHHHHHHcCCCCCCCcCcCceEEeC
Confidence 7655 889999999999999999999999999999999999999999999999999999875 789999999974
No 25
>KOG0865 consensus Cyclophilin type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-37 Score=243.66 Aligned_cols=163 Identities=63% Similarity=1.130 Sum_probs=155.5
Q ss_pred cccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEe---cCCceEeecCCcCCC
Q 028464 37 VTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRI---IPSFMIQGGDFTLGD 113 (208)
Q Consensus 37 ~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv---~~~~~iq~G~~~~~~ 113 (208)
++++||+|+.++++++|++++||+.|..|++++||..||+|++|. -|.++.|||+ ++++++|+||.+..+
T Consensus 2 ~~~~vf~d~~~~~~p~gr~~~~l~ad~~Pktaenf~al~tgekg~-------~yk~s~fhr~~~~~~~fm~qggDft~hn 74 (167)
T KOG0865|consen 2 VNPTVFFDIAIDGEPLGRIVFELFADKIPKTAENFRALCTGEKGF-------GYKGSCFHRLIPIIPGFMCQGGDFTCHN 74 (167)
T ss_pred CCCeeeeeeeecCccccccceecccccCcchHhhhhhcccCCCcc-------ccccchhhhccccccceeeccCcccccC
Confidence 478999999999999999999999999999999999999988765 4999999993 347999999999999
Q ss_pred CCCCcccccccccccccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCCCCC
Q 028464 114 GRGGESIFGESFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQSGE 193 (208)
Q Consensus 114 ~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~~~~ 193 (208)
++++.++|++.++||++.++|..+|+|+|++.+|++++|||||+.....|||++|+|||+|.+||+++++++....++++
T Consensus 75 gtggkSiy~ekF~DenFilkhtgpGiLSmaNagpntngsqffictaktewLdgkhVVfGkv~eGm~iv~a~e~~gs~~gk 154 (167)
T KOG0865|consen 75 GTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMDIVEAMERFGSRNGK 154 (167)
T ss_pred CccceEecccccCCcCcEEecCCCCeeehhhcCCCccccEEEEEccccccccCceeEcCceEcccchhhhhhccCCcCCc
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred cccceEEEeeeee
Q 028464 194 PKSKVVISNSGEM 206 (208)
Q Consensus 194 P~~~i~I~~cg~l 206 (208)
|..+|+|.+||+|
T Consensus 155 ~~~~i~i~dcg~l 167 (167)
T KOG0865|consen 155 TSKKITIADCGQL 167 (167)
T ss_pred ccccEEEecCCcC
Confidence 9999999999986
No 26
>cd01924 cyclophilin_TLP40_like cyclophilin_TLP40_like: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) similar ot the Spinach thylakoid lumen protein TLP40. Compared to the archetypal cyclophilin Human cyclophilin A, these proteins have similar peptidylprolyl cis- trans isomerase activity and reduced affinity for cyclosporin A. Spinach TLP40 has been shown to have a dual function as a folding catalyst and regulator of dephosphorylation.
Probab=100.00 E-value=1.8e-36 Score=240.90 Aligned_cols=128 Identities=32% Similarity=0.531 Sum_probs=108.2
Q ss_pred CEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCC--------------
Q 028464 49 GKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDG-------------- 114 (208)
Q Consensus 49 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~-------------- 114 (208)
.|+.|+|+||||++.||.+|+||++|| +.+||+++.||||+++|+|||||+...+.
T Consensus 3 ~T~~G~i~ieL~~~~aP~t~~NF~~L~----------~~g~Ydg~~FhRVi~~fviQgGdp~~~~~~~~~~~~~~~~~~p 72 (176)
T cd01924 3 ATDNGTITIVLDGYNAPVTAGNFVDLV----------ERGFYDGMEFHRVEGGFVVQTGDPQGKNPGFPDPETGKSRTIP 72 (176)
T ss_pred ccccceEEEEEcCCCCCHHHHHHHHHH----------HhCCcCCCEEEEecCCcEEEecCCCCCCCCccccccccccccc
Confidence 378999999999999999999999999 45599999999999999999999863310
Q ss_pred ------CCCcccccccc-----cccccccccCCCeEEEEeecC--CCCCCceEEEEcc-------CCCCCCCCCcEEEEE
Q 028464 115 ------RGGESIFGESF-----ADENFKLKHTGPGVLSMANAG--PDTNGSQFFITTV-------ITSWLDGRHVVFGKV 174 (208)
Q Consensus 115 ------~~~~~~~~~~~-----~~e~~~~~~~~~G~l~~~~~~--~~~~~sqF~Itl~-------~~~~ld~~~~vfG~V 174 (208)
..+.++++..+ .++...+.|+.+|+|+|++++ +++++|||||+++ +.|+||++|+|||+|
T Consensus 73 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laMa~~~~~~ns~~SQFfI~~~~~~~~~~~~~~Ldg~ytVFG~V 152 (176)
T cd01924 73 LEIKPEGQKQPVYGKTLEEAGRYDEQPVLPFNAFGAIAMARTEFDPNSASSQFFFLLKDNELTPSRNNVLDGRYAVFGYV 152 (176)
T ss_pred ceecccCCCCCccCcccccccccccccccccCCCCeEEEccCCCCCCCccceEEEEeccccccCCCCCccCCCceEEEEE
Confidence 11223444332 245566788899999999987 6999999999998 789999999999999
Q ss_pred EcCHHHHHHHHh
Q 028464 175 LSGMDVVRKIEA 186 (208)
Q Consensus 175 i~G~~vl~~I~~ 186 (208)
++|||||++|+.
T Consensus 153 veG~dvl~~I~~ 164 (176)
T cd01924 153 TDGLDILRELKV 164 (176)
T ss_pred ecCHHHHHhhcC
Confidence 999999999974
No 27
>KOG0885 consensus Peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-35 Score=249.88 Aligned_cols=158 Identities=39% Similarity=0.646 Sum_probs=143.1
Q ss_pred ccccccEEEEEEEECCEEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCC
Q 028464 34 LEKVTHKVYFDIEVGGKPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGD 113 (208)
Q Consensus 34 ~~~~~~~v~~di~v~~t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~ 113 (208)
-|+.+.+|.+. |+.|+|-||||+.+||.+|+||++||. .+||+|+.|||++|+|.+|||||. ++
T Consensus 8 EP~ttgkvil~-----TT~G~I~iELW~kE~P~acrnFiqKOG----------egyy~nt~fhrlvp~f~~Qggdp~-~~ 71 (439)
T KOG0885|consen 8 EPPTTGKVILK-----TTKGDIDIELWAKECPKACRNFIQLCL----------EGYYDNTEFHRLVPGFLVQGGDPT-GT 71 (439)
T ss_pred CCCccceEEEE-----eccCceeeeehhhhhhHHHHHHHHHHH----------hccccCceeeeeccchhcccCCCC-CC
Confidence 35556777776 779999999999999999999999994 449999999999999999999997 89
Q ss_pred CCCCccccccccccccc-ccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEE-cCHHHHHHHHhCCCC-
Q 028464 114 GRGGESIFGESFADENF-KLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIEAEGRQ- 190 (208)
Q Consensus 114 ~~~~~~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi-~G~~vl~~I~~~~~~- 190 (208)
|+||.++||.++.+|.+ +++++++|+|+|++.+.+.+|||||+||++.|++++++++||+|+ +-+-.+-+|..+..+
T Consensus 72 gtGgesiyg~~fadE~h~Rlrf~rrGlvgmana~~~~ngsqFfftl~~~~el~nk~tiFGKVtGdtIYn~lri~e~eida 151 (439)
T KOG0885|consen 72 GTGGESIYGRPFADEFHPRLRFNRRGLVGMANAGNDDNGSQFFFTLGDTPELNNKHTIFGKVTGDTIYNMLRISEVEIDA 151 (439)
T ss_pred CCCccccccccchhhcCcceeeeccceeeecccCCCCCCceEEEEecCChHhcccCceeeeecchhhhhhhhhccccccc
Confidence 99999999999999976 678889999999999999999999999999999999999999998 567777888877654
Q ss_pred CCCcccceEEEeeeeec
Q 028464 191 SGEPKSKVVISNSGEMA 207 (208)
Q Consensus 191 ~~~P~~~i~I~~cg~l~ 207 (208)
+.||..+-.|.+|.+|.
T Consensus 152 ~~Rp~~p~kI~s~EV~~ 168 (439)
T KOG0885|consen 152 DDRPVDPPKIKSVEVLI 168 (439)
T ss_pred ccCCCCccceeeeEeec
Confidence 78999999999999874
No 28
>KOG0415 consensus Predicted peptidyl prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-34 Score=242.60 Aligned_cols=147 Identities=42% Similarity=0.662 Sum_probs=134.0
Q ss_pred EEeeEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCccccccc-----
Q 028464 50 KPIGRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGES----- 124 (208)
Q Consensus 50 t~~G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~----- 124 (208)
|++|+|+|+||.+++|.+|.||++|| |..||+.|.||.|.++|.+|+|||+ |.|.||.++|+..
T Consensus 7 TtlGDlvIDLf~~erP~~clNFLKLC----------k~KYYN~clfh~vq~~f~aQTGDPt-GtG~GG~si~~~lyG~q~ 75 (479)
T KOG0415|consen 7 TTLGDLVIDLFVKERPRTCLNFLKLC----------KIKYYNFCLFHTVQRDFTAQTGDPT-GTGDGGESIYGVLYGEQA 75 (479)
T ss_pred eecccEEeeeecccCcHHHHHHHHHH----------hHhhcccceeeeccccceeecCCCC-CCCCCcceeeeecccccc
Confidence 88999999999999999999999999 6669999999999999999999998 7999999998643
Q ss_pred --ccccc-cccccCCCeEEEEeecCCCCCCceEEEEccC-CCCCCCCCcEEEEEEcCHHHHHHHHhC-CCCCCCcccceE
Q 028464 125 --FADEN-FKLKHTGPGVLSMANAGPDTNGSQFFITTVI-TSWLDGRHVVFGKVLSGMDVVRKIEAE-GRQSGEPKSKVV 199 (208)
Q Consensus 125 --~~~e~-~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~-~~~ld~~~~vfG~Vi~G~~vl~~I~~~-~~~~~~P~~~i~ 199 (208)
+..|. ..++|.+.|+|+|++.+.+.+||||||||++ +..||++|+|||+|.+|+|+|.+|+.. .+.+++|+++|+
T Consensus 76 rffeaE~~p~l~Hsk~G~vsmvs~g~n~~gSQF~iTlgenLdyLDg~htvfGqV~EG~dtl~kiNea~vD~~~rPykdIR 155 (479)
T KOG0415|consen 76 RFFEAEFLPKLKHSKMGTVSMVSAGENLNGSQFFITLGENLDYLDGKHTVFGQVAEGFDTLTKINEAIVDPKNRPYKDIR 155 (479)
T ss_pred hhhhhhhcccccccccceEEeecCCcccccceEEEEccccccccccccceeeehhhhHHHHHHHHHHhcCCCCCccccee
Confidence 34443 3789999999999999999999999999975 579999999999999999999999755 678899999999
Q ss_pred EEeeeeec
Q 028464 200 ISNSGEMA 207 (208)
Q Consensus 200 I~~cg~l~ 207 (208)
|++.-+|+
T Consensus 156 I~HTiiLd 163 (479)
T KOG0415|consen 156 IKHTIILD 163 (479)
T ss_pred eeeeEEec
Confidence 99998886
No 29
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=97.47 E-value=0.00013 Score=64.90 Aligned_cols=140 Identities=23% Similarity=0.284 Sum_probs=105.4
Q ss_pred EEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcc-cc-cc---cccc-
Q 028464 54 RIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGES-IF-GE---SFAD- 127 (208)
Q Consensus 54 ~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~-~~-~~---~~~~- 127 (208)
.|.|+++.+-.|.-++-|...| +.+++++..|.+|.+.+++|.||.......+|.- .| ++ .+++
T Consensus 113 ~IAVs~~~sg~i~VvD~~~d~~----------q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~ 182 (558)
T KOG0882|consen 113 LIAVSLFKSGKIFVVDGFGDFC----------QDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRT 182 (558)
T ss_pred eEEeecccCCCcEEECCcCCcC----------ccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccc
Confidence 8999999999999999999999 5559999999999999999999865433322211 11 11 1222
Q ss_pred -cccccccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHHhCCCC-CCCcccceEEEeee
Q 028464 128 -ENFKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIEAEGRQ-SGEPKSKVVISNSG 204 (208)
Q Consensus 128 -e~~~~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~~~~~~-~~~P~~~i~I~~cg 204 (208)
....++|. .-++..........+-+|.+.-...+-+..+..|+|++.+|-+++..|....++ +..|+.++.|.+..
T Consensus 183 ~l~~~~K~e-TdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~Ve 260 (558)
T KOG0882|consen 183 NLNFELKHE-TDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVE 260 (558)
T ss_pred ccccccccc-chhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceee
Confidence 23345554 455555555545557789999888899999999999999999999999887654 56888888887653
No 30
>TIGR03268 methan_mark_3 putative methanogenesis marker protein 3. A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. This protein family was detected by the method of partial phylogenetic profiling (see Haft, et al., 2006). The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis.
Probab=96.67 E-value=0.016 Score=52.50 Aligned_cols=114 Identities=18% Similarity=0.313 Sum_probs=65.3
Q ss_pred EEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccccccc
Q 028464 54 RIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENFKLK 133 (208)
Q Consensus 54 ~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~~~ 133 (208)
=|.||||.+.||+++..|.+.. |-.- ..-|+ ..+|-..++.++.=|+.. +...+.+|+..-.
T Consensus 376 vi~IeLydd~AP~s~~yFRk~t-GL~~-~~VG~------L~v~F~~~d~~mFk~~~~----------~~k~LiPEN~P~~ 437 (503)
T TIGR03268 376 VIEIELYDDNAPRSVWYFRKFT-GLKT-KPVGR------LPVHFAFKEMIMFKGNKE----------LAKGLIPENTPED 437 (503)
T ss_pred EEEEEEcccCCchHHHHHHHhc-CCcc-cccce------eEEEEEeCCeeEeccCch----------hccccCCCCCCCC
Confidence 5889999999999999999986 2211 01111 244444555444322222 1233455554444
Q ss_pred cCCCeEEEEeecCCCCCCceEEEEccCCCCCCC------CCcEEEEEEcCHHHHHHHHh
Q 028464 134 HTGPGVLSMANAGPDTNGSQFFITTVITSWLDG------RHVVFGKVLSGMDVVRKIEA 186 (208)
Q Consensus 134 ~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~------~~~vfG~Vi~G~~vl~~I~~ 186 (208)
...+|.+++-+......| -.-|-+.++..+-. .-.++|+|++++|-|+++..
T Consensus 438 ~V~ag~IgvTN~a~k~~G-~IGVRl~d~defGPTGE~F~gTNIiG~Vv~~~e~Lk~~Ke 495 (503)
T TIGR03268 438 KVEAGVIGVTNQACKHVG-MIGVRLEDSDEFGPTGEPFSGTNIIGRVVEGMERLKGLKE 495 (503)
T ss_pred ccccceEeeechhhhcCc-eEEEEccCCcccCCCCCCccCcceEEEecCChhHhccccc
Confidence 555788887765422111 12333333333221 24688999999999988764
No 31
>COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=96.58 E-value=0.0083 Score=52.87 Aligned_cols=102 Identities=23% Similarity=0.356 Sum_probs=64.3
Q ss_pred eEEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCccccccccccccccc
Q 028464 53 GRIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENFKL 132 (208)
Q Consensus 53 G~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~~ 132 (208)
=.+.+||.++ +|+++++|+.|...+. -+..|+ .|-++. ..+.....++.|+..+
T Consensus 203 Ty~eve~s~n-sP~saEH~lalmedG~------lri~~~--------tntfis-----------~~~lq~~~~~~en~d~ 256 (512)
T COG4070 203 TYFEVELSRN-SPKSAEHFLALMEDGT------LRIDVT--------TNTFIS-----------DDTLQEEKVPEENFDL 256 (512)
T ss_pred EEEEEEeCCC-CchhHHHHHHHhhcce------EEEEEe--------ccceee-----------ccccccccCChhhhhh
Confidence 4677888654 5999999999984321 001122 222221 1112234556666554
Q ss_pred ccCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHH
Q 028464 133 KHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE 185 (208)
Q Consensus 133 ~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~ 185 (208)
. .+|.++..+.|.+ ...-||---+.+.. ..|.|+|||++|||++|--.
T Consensus 257 R--erG~iTvRn~Gvg--eGrvYIyRedR~ss-~sHnvVGrV~eGiELid~a~ 304 (512)
T COG4070 257 R--ERGAITVRNVGVG--EGRVYIYREDRPSS-LSHNVVGRVIEGIELIDLAE 304 (512)
T ss_pred h--hcceEEEEeeecc--cceEEEEecCCCCc-cccceeeeeecceEEEEecc
Confidence 4 4899999988754 34678887655432 36899999999999987544
No 32
>PRK00969 hypothetical protein; Provisional
Probab=96.57 E-value=0.013 Score=53.19 Aligned_cols=101 Identities=22% Similarity=0.342 Sum_probs=64.3
Q ss_pred EEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccccccc
Q 028464 54 RIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENFKLK 133 (208)
Q Consensus 54 ~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~~~ 133 (208)
.+.+||.+ .||.++++|+.+...+ .++ +.+....|.- ..+..+...+.|+..
T Consensus 205 y~eve~~~-~~p~s~EH~la~~~~G----------~f~---Vd~~tstfI~------------d~~L~g~~~p~En~~-- 256 (508)
T PRK00969 205 YVEVELDP-GAPKSVEHFLALLEDG----------TFE---VDFETSTFIA------------DDRLQGLKIPEENFE-- 256 (508)
T ss_pred EEEEEEcC-CCCchHHHHHHHHhCC----------eEE---EeeeecceEe------------eccccCccCCccccC--
Confidence 56677754 5699999999999543 111 1111111111 111224455666654
Q ss_pred cCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHH
Q 028464 134 HTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE 185 (208)
Q Consensus 134 ~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~ 185 (208)
...+|++++.+.|.+ ....||--.+.+.. -.|+|+|+|+.|||+++--.
T Consensus 257 ~R~~GtVTVRt~G~g--~G~vYIyredr~ss-~sHtvVG~V~~GiELi~~a~ 305 (508)
T PRK00969 257 PRRRGTVTVRTAGVG--VGKVYIYREDRPSS-LSHTVVGRVTHGIELIDFAK 305 (508)
T ss_pred ccccceEEEEeeccC--ceeEEEECCCCCCC-ccceeEEEEecceeeeeccc
Confidence 334899999998755 35689988766543 36999999999999987543
No 33
>TIGR03268 methan_mark_3 putative methanogenesis marker protein 3. A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. This protein family was detected by the method of partial phylogenetic profiling (see Haft, et al., 2006). The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis.
Probab=96.56 E-value=0.016 Score=52.54 Aligned_cols=101 Identities=21% Similarity=0.322 Sum_probs=64.1
Q ss_pred EEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccccccc
Q 028464 54 RIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENFKLK 133 (208)
Q Consensus 54 ~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~~~ 133 (208)
.+.+||. ..+|.++++|+.+...+ +++ +.+....|.- .....+...+.|+..
T Consensus 202 y~evE~~-~~~p~s~EH~la~~~~G----------~~~---Vd~~tsTfi~------------d~~L~g~~~p~En~~-- 253 (503)
T TIGR03268 202 YVEVELD-PNAPVSVEHFLALMEDG----------TFR---VDYRTSTFIS------------DDSLRGLDKPEENIE-- 253 (503)
T ss_pred EEEEEEc-CCCChhHHHHHHHHhCC----------eEE---EeeeecceEe------------cccccCccCCccccC--
Confidence 5667765 55699999999998433 111 1111111111 111224455666554
Q ss_pred cCCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEEcCHHHHHHHH
Q 028464 134 HTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRKIE 185 (208)
Q Consensus 134 ~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi~G~~vl~~I~ 185 (208)
...+|++++.+.|.+ ....||-..+.+.. -.|+|+|+|+.|||+++--+
T Consensus 254 ~R~rGtVTVRn~G~G--~G~VYIYredr~ss-~sHtvVG~V~~GiELid~a~ 302 (503)
T TIGR03268 254 KRRRGAVTVRNSGVG--EGRVYIYREDRPSS-LSHNVVGHVTRGIELIDIAQ 302 (503)
T ss_pred cccceeEEEEeeccC--ceeEEEEcCCCCCC-cccceeEEEecceeeeeccc
Confidence 344899999998755 34689988766543 36999999999999987543
No 34
>PRK00969 hypothetical protein; Provisional
Probab=96.22 E-value=0.042 Score=50.04 Aligned_cols=113 Identities=17% Similarity=0.265 Sum_probs=65.3
Q ss_pred EEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCceEeecCCcCCCCCCCcccccccccccccccc
Q 028464 54 RIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSFMIQGGDFTLGDGRGGESIFGESFADENFKLK 133 (208)
Q Consensus 54 ~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~~~ 133 (208)
=|.||||.+.||+++..|.++. |-.- ..-| -..+|=..++.++.-|+.. +...+.+|+..-.
T Consensus 379 vi~IeLydd~AP~s~~yFR~~t-GL~~-~~VG------~L~v~F~~~d~~lFk~~~~----------~~k~liPEN~P~~ 440 (508)
T PRK00969 379 LIEIELYDDKAPRTVWYFRKVT-GLKT-KPVG------KLPVYFKYEDTYLFKGNIE----------YAKGLLPENTPED 440 (508)
T ss_pred EEEEEEcCcCCchHHHHHHHhc-CCcc-cccc------eeEEEEEeCCeEEEccChh----------hccccCCCCCCCC
Confidence 5889999999999999999986 2110 0111 1244455566554433322 1234455555444
Q ss_pred cCCCeEEEEeecCCCCCCceEEEEccCCCCCC------CCCcEEEEEEcCHHHHHHHHh
Q 028464 134 HTGPGVLSMANAGPDTNGSQFFITTVITSWLD------GRHVVFGKVLSGMDVVRKIEA 186 (208)
Q Consensus 134 ~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld------~~~~vfG~Vi~G~~vl~~I~~ 186 (208)
...+|.+++-+......| -.-|-+.++..+- ..-.++|+|+ ++|-|+++..
T Consensus 441 ~V~ag~IgvTN~a~k~~G-~iGVR~~d~d~fGPTGE~F~gTNIIGrVv-~~e~Lk~lKe 497 (508)
T PRK00969 441 KVKAGEIGVTNMAAKYKG-MIGVRLSDNDEFGPTGEPFEGTNIIGRVV-NLEKLKKLKE 497 (508)
T ss_pred ccccceEeeechhhhcCc-eEEEEccCCcccCCCCCCccCceeEEEec-ChHHhccccc
Confidence 556788877765422111 1223333333222 1356999999 9999888764
No 35
>PF12903 DUF3830: Protein of unknown function (DUF3830); InterPro: IPR024532 This is a family of bacterial and archaeal proteins. The structure of one of family members, A0JVT3 from SWISSPROT, has been characterised and shown to contain a cyclophilin-like fold.; PDB: 3KOP_B.
Probab=95.58 E-value=0.058 Score=41.57 Aligned_cols=107 Identities=19% Similarity=0.120 Sum_probs=56.4
Q ss_pred EEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCCc--eEeecCCcCCCCCCCcccccccccccccc
Q 028464 54 RIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPSF--MIQGGDFTLGDGRGGESIFGESFADENFK 131 (208)
Q Consensus 54 ~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~~--~iq~G~~~~~~~~~~~~~~~~~~~~e~~~ 131 (208)
.++.+|..|.||+||+.|.+.- =|.+..+|-...+. ++.-++... ...+.|+..
T Consensus 9 ~~~A~l~~d~AP~Tcaa~~~~L-------------P~~~~~~HarwSG~ei~~~l~~~~~-----------~~~~~EN~T 64 (147)
T PF12903_consen 9 SFTARLLDDKAPKTCAAFWEAL-------------PLKGKVIHARWSGEEIWIPLPDFDP-----------FEPGRENHT 64 (147)
T ss_dssp EEEEEE-TTTSHHHHHHHHHH---------------EEEE-EE-SSSSSEEEEEEE--SS-----------S---S-SEE
T ss_pred EEEEEEcccCChHHHHHHHHhC-------------CCCCcEEEEEEECcEEEEECCCcCc-----------CCCCCCcCc
Confidence 6889999999999999999998 37777888776653 454455330 112334332
Q ss_pred cccCCCeEEEEe--ec-CCC--CC-CceEEEEccCCCCCC-CC-----CcEEEEEEcCHHHHHHHH
Q 028464 132 LKHTGPGVLSMA--NA-GPD--TN-GSQFFITTVITSWLD-GR-----HVVFGKVLSGMDVVRKIE 185 (208)
Q Consensus 132 ~~~~~~G~l~~~--~~-~~~--~~-~sqF~Itl~~~~~ld-~~-----~~vfG~Vi~G~~vl~~I~ 185 (208)
.+-.+|-|.+. .. ..+ .. -++.-|.++...-+- .+ -.+|++|++|+|-|.++-
T Consensus 65 -~~P~pGdi~~~y~~~~~~~~~pg~~~e~~i~yg~g~~~f~~~~G~l~GN~FatI~egle~la~~~ 129 (147)
T PF12903_consen 65 -VTPIPGDILLYYEPGSAWGGNPGGISETEIFYGYGNLLFASKMGWLPGNHFATITEGLEELAEAC 129 (147)
T ss_dssp -SS--TTEEEEE-----------E-EEEEEEE-SSS---EETTTEE--EEEEEEEEESHHHHHHHH
T ss_pred -ccCCCCcEEEEecCCccccCCCcceEEEEEEEeeCceEecCCccccceeEEEEEcCCHHHHHHHH
Confidence 22235666665 11 111 11 145555554332211 11 479999999999887774
No 36
>COG4070 Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family [Posttranslational modification, protein turnover, chaperones]
Probab=94.55 E-value=0.14 Score=45.39 Aligned_cols=115 Identities=17% Similarity=0.229 Sum_probs=58.2
Q ss_pred EEEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecCC--ceEeecCCcCCCCCCCcccccccccccccc
Q 028464 54 RIVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIPS--FMIQGGDFTLGDGRGGESIFGESFADENFK 131 (208)
Q Consensus 54 ~i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~~--~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~ 131 (208)
-|.||||.+.||.++..|.+... -... .-|+ ...|-..++ .+..-|+.. ++..+.+|+..
T Consensus 377 iieIELyed~APrSv~yFRr~t~-l~~k-pVGk------L~Vhfay~d~~~vmfegn~~----------~~K~llPEN~P 438 (512)
T COG4070 377 IIEIELYEDRAPRSVWYFRRSTG-LKTK-PVGK------LKVHFAYDDTYLVMFEGNAV----------LAKGLLPENTP 438 (512)
T ss_pred EEEEEecCCCCchhhHHHHhhcc-cccc-cccc------eEEEEEeCCceEEEEcCChH----------HhccCCCCCCc
Confidence 48899999999999999998862 1110 1112 244444454 122222222 12233444433
Q ss_pred cccCCCeEEEEeecCCCCCCceEEEEccCCCCCC------CCCcEEEEEEcCHHHHHHHHhC
Q 028464 132 LKHTGPGVLSMANAGPDTNGSQFFITTVITSWLD------GRHVVFGKVLSGMDVVRKIEAE 187 (208)
Q Consensus 132 ~~~~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld------~~~~vfG~Vi~G~~vl~~I~~~ 187 (208)
.....+|.++.-+....-.| -.-+-|.++..+- ....++|+|++|.+-|..|...
T Consensus 439 ~d~Ve~g~iGvTN~a~r~~G-mIGVRL~dsdefGPTGE~Fe~TNiIGrIveg~e~l~~ikeG 499 (512)
T COG4070 439 ADTVEAGEIGVTNQAARHMG-MIGVRLEDSDEFGPTGEKFEGTNIIGRIVEGPERLIGIKEG 499 (512)
T ss_pred hhheecccccccccchhccc-eeEEEeccccccCCCCCccccceeehhhccChHHhcccccC
Confidence 33333444443332211000 1112222222221 2357999999999999888753
No 37
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=90.05 E-value=0.31 Score=34.86 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=15.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHhc
Q 028464 1 MATKTRLVSVALLWALVLFLTLAFIQE 27 (208)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (208)
|+ -|.+++++|+|++++++++..+++
T Consensus 1 Ma-SK~~llL~l~LA~lLlisSevaa~ 26 (95)
T PF07172_consen 1 MA-SKAFLLLGLLLAALLLISSEVAAR 26 (95)
T ss_pred Cc-hhHHHHHHHHHHHHHHHHhhhhhH
Confidence 55 455667777766666665554443
No 38
>PF04126 Cyclophil_like: Cyclophilin-like; InterPro: IPR007256 Proteins of this family have no known function.; PDB: 2KA0_A 1ZX8_C 2NNZ_A.
Probab=60.81 E-value=8.5 Score=28.50 Aligned_cols=46 Identities=15% Similarity=0.212 Sum_probs=29.9
Q ss_pred CCCeEEEEeecCCCCCCceEEEEccCCCC-------CCCCCcEEEEEEcCHHHHHHHH
Q 028464 135 TGPGVLSMANAGPDTNGSQFFITTVITSW-------LDGRHVVFGKVLSGMDVVRKIE 185 (208)
Q Consensus 135 ~~~G~l~~~~~~~~~~~sqF~Itl~~~~~-------ld~~~~vfG~Vi~G~~vl~~I~ 185 (208)
...|-|+.-..+. -|.|.+++.|. .-....++|||.+|.+.++++.
T Consensus 60 ~~~GDi~Yw~pg~-----~l~ifyg~~p~S~~~~~~~~~~v~~lG~i~~~~~~l~~~~ 112 (120)
T PF04126_consen 60 VEAGDIAYWPPGG-----ALAIFYGDTPISEGGEIRPASPVNVLGRIVSDLENLKEVK 112 (120)
T ss_dssp B-TTEEEEECCCT-----EEEEESS--TT--TTSB--SSSEEEEEEEEC-GGGGGG--
T ss_pred ccCceEEEeCCCC-----EEEEEecCcccccccccccCCcceEEEEECCCHHHHhhCC
Confidence 3578888876543 38888888753 3445789999999999988875
No 39
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=52.17 E-value=8.7 Score=34.01 Aligned_cols=50 Identities=18% Similarity=0.191 Sum_probs=34.5
Q ss_pred CCCeEEEEeecCCCCCCceEEEEccCCCCCCCCCcEEEEEE-cCHHHHHHHH
Q 028464 135 TGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVL-SGMDVVRKIE 185 (208)
Q Consensus 135 ~~~G~l~~~~~~~~~~~sqF~Itl~~~~~ld~~~~vfG~Vi-~G~~vl~~I~ 185 (208)
..+|.+.+.+........|.-|++.+.|. |++..|+|+|. +-+.+|+-|.
T Consensus 298 r~~G~ItIdN~~ygRY~GElQI~~~dlp~-d~rvNViG~V~~~d~~LLd~I~ 348 (357)
T PF05913_consen 298 RKRGDITIDNENYGRYKGELQIVKKDLPA-DERVNVIGRVDEEDLPLLDYIK 348 (357)
T ss_dssp B-TTEEEEE-GGGGGGTT-EEEESS-B----TTEEEEEEE-GGGGGGGGG--
T ss_pred ccCceEEEeCCCccccccEEEEEcccCCC-CCCeeEEEEECHHHHHHHHhcC
Confidence 45899999998766667899999999886 88899999999 4688888886
No 40
>COG2164 Uncharacterized conserved protein [Function unknown]
Probab=47.59 E-value=13 Score=26.91 Aligned_cols=32 Identities=13% Similarity=0.357 Sum_probs=24.0
Q ss_pred EEEEccCCCCCCCC------CcEEEEEEcCHHHHHHHH
Q 028464 154 FFITTVITSWLDGR------HVVFGKVLSGMDVVRKIE 185 (208)
Q Consensus 154 F~Itl~~~~~ld~~------~~vfG~Vi~G~~vl~~I~ 185 (208)
..+.++..|-.|.+ ..++||++++||.+.++.
T Consensus 79 lClFFGkTpmsddkiqPaSaVNvIGrIv~~lE~lk~v~ 116 (126)
T COG2164 79 LCLFFGKTPMSDDKIQPASAVNVIGRIVKNLELLKSVD 116 (126)
T ss_pred EEEEecCCcCcccccCccchHHHHHHHHhhHHhhhccc
Confidence 45555667766665 358999999999998775
No 41
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=46.07 E-value=20 Score=25.50 Aligned_cols=26 Identities=31% Similarity=0.239 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccc
Q 028464 8 VSVALLWALVLFLTLAFIQEGNSREE 33 (208)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (208)
.+.+|++++++++++.++++.++++.
T Consensus 3 SK~~llL~l~LA~lLlisSevaa~~~ 28 (95)
T PF07172_consen 3 SKAFLLLGLLLAALLLISSEVAAREL 28 (95)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 35667777777777777766666544
No 42
>PF08415 NRPS: Nonribosomal peptide synthase; InterPro: IPR013624 This domain is found in bacterial non-ribosomal peptide synthetases (NRPS). NRPS are megaenzymes organised as iterative modules, one for each amino acid to be built into the peptide product []. NRPS modules are involved in epothilone biosynthesis (EpoB), myxothiazol biosynthesis (MtaC and MtaD), and other functions []. The NRPS domain tends to be found together with the condensation domain (IPR001242 from INTERPRO) and the phosphopantetheine binding domain (IPR006163 from INTERPRO).
Probab=43.61 E-value=24 Score=22.34 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=20.8
Q ss_pred EcCHHHHHHHHhCCCCCCCcccceEEEe
Q 028464 175 LSGMDVVRKIEAEGRQSGEPKSKVVISN 202 (208)
Q Consensus 175 i~G~~vl~~I~~~~~~~~~P~~~i~I~~ 202 (208)
++|.||++++.+. .....+..||..++
T Consensus 4 ~sGv~vlRel~r~-~~~~~~~~PVVFTS 30 (58)
T PF08415_consen 4 FSGVEVLRELARR-GGGRAAVMPVVFTS 30 (58)
T ss_pred ccHHHHHHHHHHh-cCCCCCcCCEEEeC
Confidence 4799999999987 55566777777765
No 43
>PF11314 DUF3117: Protein of unknown function (DUF3117); InterPro: IPR021465 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=29.56 E-value=27 Score=21.69 Aligned_cols=27 Identities=19% Similarity=0.322 Sum_probs=18.3
Q ss_pred cEEEEEEEECCEEeeEEEEEEeCCCCcch
Q 028464 39 HKVYFDIEVGGKPIGRIVMGLFGKAVPKT 67 (208)
Q Consensus 39 ~~v~~di~v~~t~~G~i~ieL~~~~aP~~ 67 (208)
..+.+.+-.+| =||++|||.+++|-..
T Consensus 17 R~ivmRvPleG--GGRLVvEl~~~Ea~~L 43 (51)
T PF11314_consen 17 RGIVMRVPLEG--GGRLVVELNPDEAKEL 43 (51)
T ss_pred ceEEEEEecCC--CcEEEEEeCHHHHHHH
Confidence 44556655543 4899999998886443
No 44
>PRK15310 fimbrial outer membrane usher protein TcfC; Provisional
Probab=26.79 E-value=1.4e+02 Score=29.83 Aligned_cols=27 Identities=7% Similarity=0.116 Sum_probs=22.5
Q ss_pred cccEEEEEEEECCEEeeEEEEEEeCCC
Q 028464 37 VTHKVYFDIEVGGKPIGRIVMGLFGKA 63 (208)
Q Consensus 37 ~~~~v~~di~v~~t~~G~i~ieL~~~~ 63 (208)
..+..++||..+|.++|...|.|-.|.
T Consensus 33 ~gq~e~vdV~l~G~~LG~~~v~l~~dt 59 (895)
T PRK15310 33 EGQTEQIEVLLPGHSLGLFPVVVKPDT 59 (895)
T ss_pred CCCceEEEEEECCEEceeeEEEEcCCc
Confidence 356678999999999998888887775
No 45
>PRK06287 cobalt transport protein CbiN; Validated
Probab=26.75 E-value=99 Score=22.42 Aligned_cols=26 Identities=19% Similarity=0.423 Sum_probs=16.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHh
Q 028464 1 MATKTRLVSVALLWALVLFLTLAFIQ 26 (208)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (208)
|+..++++...++.++++....+..+
T Consensus 1 ~~~~~~~~~~~~~~all~a~~~s~~A 26 (107)
T PRK06287 1 MMDNKKFLIAGLIVALLIAILAPFLA 26 (107)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHhhh
Confidence 55666677777777777666555443
No 46
>PRK11917 bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein; Reviewed
Probab=25.93 E-value=37 Score=28.04 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=8.3
Q ss_pred CcccchhHHHHHHHH
Q 028464 1 MATKTRLVSVALLWA 15 (208)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (208)
|-+++.++.++.+.+
T Consensus 1 ~~~~~~~~~~~~~~~ 15 (259)
T PRK11917 1 MVFRKSLLKLAVFAL 15 (259)
T ss_pred CchHHHHHHHHHHHh
Confidence 555666666655433
No 47
>COG0219 CspR Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]
Probab=24.93 E-value=1.2e+02 Score=23.64 Aligned_cols=33 Identities=24% Similarity=0.480 Sum_probs=29.4
Q ss_pred EEEEEeCCCCcchHHHHHHhhhcCCCcccCCCcccccCCEEEEecC
Q 028464 55 IVMGLFGKAVPKTVENFRALCTGEKGIGKSGKPLYYKGSSFHRIIP 100 (208)
Q Consensus 55 i~ieL~~~~aP~~~~nF~~l~~g~~g~~~~~~~~~Y~g~~f~rv~~ 100 (208)
+.|-||.-+-|..+-|.+++| .-.|+..|.|.|
T Consensus 3 ~~IvL~~PeIP~NTGNI~R~c-------------a~tga~LhlI~P 35 (155)
T COG0219 3 LNIVLYQPEIPPNTGNIIRTC-------------AATGAELHLIEP 35 (155)
T ss_pred cEEEEECCCCCCchhHHHHHH-------------HhcCCeEEEEcc
Confidence 568899999999999999999 577889999977
No 48
>TIGR03562 osmo_induc_OsmC peroxiredoxin, OsmC subfamily. Pfam model pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein OsmC, or osmotically induced protein C. The member from Thermus thermophilus was shown to have hydroperoxide peroxidase activity. In many species, this protein is induced by stress and helps resist oxidative stress.
Probab=21.47 E-value=3.5e+02 Score=20.17 Aligned_cols=13 Identities=0% Similarity=-0.074 Sum_probs=9.1
Q ss_pred CCcchHHHHHHhh
Q 028464 63 AVPKTVENFRALC 75 (208)
Q Consensus 63 ~aP~~~~nF~~l~ 75 (208)
..+...++.++++
T Consensus 105 ~~~e~~~rll~~A 117 (135)
T TIGR03562 105 IDEAKFQEIAEKA 117 (135)
T ss_pred CCHHHHHHHHHHH
Confidence 5666677777776
No 49
>PF15240 Pro-rich: Proline-rich
Probab=20.42 E-value=69 Score=25.58 Aligned_cols=12 Identities=25% Similarity=0.285 Sum_probs=4.8
Q ss_pred HHHHHhcCCCcc
Q 028464 21 TLAFIQEGNSRE 32 (208)
Q Consensus 21 ~~~~~~~~~~~~ 32 (208)
++|+++|..+++
T Consensus 10 LLALSSAQ~~dE 21 (179)
T PF15240_consen 10 LLALSSAQSTDE 21 (179)
T ss_pred HHHhhhcccccc
Confidence 333444444433
Done!