Query 028468
Match_columns 208
No_of_seqs 242 out of 1668
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 19:54:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028468.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028468hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.9 3.9E-25 1.3E-29 177.3 13.3 95 109-205 57-160 (161)
2 1gme_A Heat shock protein 16.9 99.9 1.4E-24 4.7E-29 172.7 14.2 100 107-208 42-150 (151)
3 3gla_A Low molecular weight he 99.9 8.9E-24 3.1E-28 156.3 13.8 89 107-196 3-99 (100)
4 3aab_A Putative uncharacterize 99.9 1.2E-24 4.1E-29 167.1 8.9 107 87-196 4-117 (123)
5 4fei_A Heat shock protein-rela 99.9 1.7E-23 6E-28 155.8 14.5 91 106-197 4-97 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 1E-22 3.5E-27 152.9 13.0 95 110-205 4-104 (106)
7 2wj5_A Heat shock protein beta 99.9 2.1E-22 7.1E-27 149.9 11.6 95 110-206 3-99 (101)
8 3q9p_A Heat shock protein beta 99.9 8.6E-22 2.9E-26 142.3 11.4 82 113-195 2-85 (85)
9 2klr_A Alpha-crystallin B chai 99.9 1.3E-21 4.5E-26 159.2 10.2 97 110-207 65-163 (175)
10 2bol_A TSP36, small heat shock 99.9 6.9E-21 2.4E-25 167.6 15.0 118 85-205 71-197 (314)
11 2y1y_A Alpha-crystallin B chai 99.8 1.6E-20 5.5E-25 136.8 11.0 83 114-197 2-86 (90)
12 2bol_A TSP36, small heat shock 99.7 5.1E-18 1.7E-22 149.3 11.3 87 108-195 220-314 (314)
13 1rl1_A Suppressor of G2 allele 99.0 1.2E-09 4E-14 81.9 9.9 82 107-196 8-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 8.6E-10 2.9E-14 79.3 8.7 81 108-196 2-82 (92)
15 3eud_A Protein SHQ1; CS domain 98.4 2.9E-06 9.9E-11 63.8 10.3 80 106-197 15-98 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.3 7E-07 2.4E-11 69.1 5.5 79 107-197 2-84 (134)
17 3igf_A ALL4481 protein; two-do 98.2 4.2E-06 1.4E-10 74.9 9.4 72 109-194 298-369 (374)
18 1x5m_A Calcyclin-binding prote 98.0 8.8E-05 3E-09 56.4 11.5 81 108-196 20-104 (127)
19 1wgv_A KIAA1068 protein; CS do 97.9 0.0002 6.8E-09 54.2 12.1 83 106-196 17-102 (124)
20 1wh0_A Ubiquitin carboxyl-term 97.8 9.4E-05 3.2E-09 57.1 9.0 87 108-195 19-111 (134)
21 1wfi_A Nuclear distribution ge 97.8 0.00021 7E-09 54.5 10.2 81 105-196 4-88 (131)
22 3qor_A Nuclear migration prote 97.8 0.00027 9.4E-09 53.3 10.7 81 105-196 13-97 (121)
23 1ejf_A Progesterone receptor P 97.8 0.00022 7.6E-09 54.0 9.9 78 110-196 5-82 (125)
24 2rh0_A NUDC domain-containing 97.6 0.00075 2.6E-08 53.2 10.8 78 107-196 12-91 (157)
25 2o30_A Nuclear movement protei 97.5 0.0006 2.1E-08 52.0 9.8 76 108-195 4-80 (131)
26 2kmw_A Uncharacterized protein 97.4 0.00057 2E-08 53.6 7.6 78 108-196 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.2 0.00015 5.2E-09 55.7 3.1 84 108-195 6-97 (134)
28 4fei_A Heat shock protein-rela 78.8 7.7 0.00026 27.3 6.9 33 120-152 63-96 (102)
29 3q9p_A Heat shock protein beta 69.9 11 0.00036 25.7 5.6 34 160-195 7-40 (85)
30 3gla_A Low molecular weight he 68.1 15 0.00051 25.4 6.2 34 161-196 15-48 (100)
31 4eld_A MJ16.5-P1, small heat s 64.4 26 0.00088 26.6 7.4 33 161-195 67-99 (161)
32 2wj5_A Heat shock protein beta 59.5 14 0.00047 26.0 4.6 32 120-151 56-89 (101)
33 3l1e_A Alpha-crystallin A chai 59.1 15 0.00051 26.1 4.8 33 120-152 57-91 (106)
34 1gme_A Heat shock protein 16.9 57.3 23 0.0008 26.7 5.9 34 119-152 105-139 (151)
35 2y1y_A Alpha-crystallin B chai 54.0 33 0.0011 23.3 5.8 33 161-195 7-39 (90)
36 3jx8_A Putative lipoprotein; s 53.1 57 0.0019 26.4 8.0 30 119-148 42-71 (250)
37 3ljy_A Putative adhesin; struc 50.8 81 0.0028 25.3 8.6 27 122-148 44-70 (243)
38 2cql_A OK/SW-CL.103, 60S ribos 49.1 17 0.00057 26.0 3.6 45 131-193 20-68 (100)
39 3aab_A Putative uncharacterize 48.6 41 0.0014 24.2 5.9 34 161-196 35-69 (123)
40 3pet_A Putative adhesin; right 48.5 26 0.00089 28.0 5.2 38 111-148 32-70 (221)
41 1rl6_A Protein (ribosomal prot 48.1 23 0.0008 27.9 4.7 45 131-193 11-55 (177)
42 1rl1_A Suppressor of G2 allele 45.8 29 0.001 24.5 4.6 35 117-151 53-88 (114)
43 2nwt_A UPF0165 protein AF_2212 44.5 15 0.0005 24.8 2.5 15 176-190 3-17 (69)
44 1vq8_E 50S ribosomal protein L 42.6 28 0.00094 27.6 4.3 46 131-193 9-54 (178)
45 2xcm_C SGT1-like protein, cyto 41.5 24 0.00081 23.7 3.4 35 117-151 46-81 (92)
46 3v2d_H 50S ribosomal protein L 40.7 31 0.0011 27.2 4.4 44 131-192 12-55 (180)
47 2klr_A Alpha-crystallin B chai 40.2 44 0.0015 26.0 5.1 33 161-195 74-106 (175)
48 1nkw_E 50S ribosomal protein L 36.4 46 0.0016 27.1 4.7 46 131-194 39-84 (212)
49 3j21_F 50S ribosomal protein L 36.2 59 0.002 25.7 5.3 50 122-192 9-58 (184)
50 1ew4_A CYAY protein; friedreic 33.6 39 0.0013 24.3 3.6 17 177-193 29-45 (106)
51 3iz5_F 60S ribosomal protein L 32.3 52 0.0018 26.2 4.4 46 131-193 13-60 (190)
52 3ug3_A Alpha-L-arabinofuranosi 30.3 94 0.0032 28.4 6.3 36 167-208 469-504 (504)
53 3u5e_H L8, RP24, YL11, 60S rib 30.1 77 0.0026 25.2 5.1 46 131-193 13-59 (191)
54 1n91_A ORF, hypothetical prote 28.5 86 0.0029 22.6 4.6 38 113-151 8-46 (108)
55 2ks0_A Uncharacterized protein 27.4 33 0.0011 23.1 2.0 23 128-150 17-39 (71)
56 3bbo_I Ribosomal protein L6; l 26.9 22 0.00075 29.2 1.3 46 131-193 54-99 (223)
57 3oeq_A Frataxin homolog, mitoc 24.1 85 0.0029 23.2 4.0 16 178-193 49-64 (123)
58 3jx8_A Putative lipoprotein; s 23.0 99 0.0034 24.9 4.7 40 108-147 54-105 (250)
59 3qqz_A Putative uncharacterize 22.9 2E+02 0.0067 23.4 6.5 68 120-190 13-86 (255)
60 3r8s_G 50S ribosomal protein L 22.1 43 0.0015 26.3 2.1 43 131-191 11-53 (176)
61 2o30_A Nuclear movement protei 21.8 1.2E+02 0.004 22.0 4.5 29 162-191 16-44 (131)
62 3rd4_A Uncharacterized protein 21.8 53 0.0018 23.6 2.3 34 115-148 33-77 (100)
63 2qzi_A Uncharacterized protein 20.8 97 0.0033 22.3 3.6 27 168-194 76-102 (103)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=3.9e-25 Score=177.29 Aligned_cols=95 Identities=24% Similarity=0.336 Sum_probs=82.4
Q ss_pred ceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCcc--------Cc-eeeEEEEEEECCCCCCCCcceE
Q 028468 109 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGED--------EE-SVRRYTSRIDLPEKLYRTDQIK 179 (208)
Q Consensus 109 p~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~--------e~-~~~~f~r~i~LP~~v~d~~~i~ 179 (208)
+++||+|++++|+|+++|||++++||+|+++++.|+|+|+++...+. |+ .++.|.|+|.||.+| |.+.|+
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~v-d~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATV-KEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCB-CGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCc-ccccEE
Confidence 34999999999999999999999999999999999999998764321 34 567999999999999 999999
Q ss_pred EEEeCCEEEEEEeCcCcccCCceEEe
Q 028468 180 AEMKNGVLKVTVPKVKEEERADVFQV 205 (208)
Q Consensus 180 A~~~nGvL~I~lPK~~~~~~~~~i~I 205 (208)
|+|+||||+|++||.++. +++.|+|
T Consensus 136 A~~~nGvL~I~lpK~~~~-~~r~I~I 160 (161)
T 4eld_A 136 AKFENGVLSVILPKAESS-IKKGINI 160 (161)
T ss_dssp EEEETTEEEEEEEBCGGG-SCCCCCC
T ss_pred EEEECCEEEEEEEcCCCC-CCcEeec
Confidence 999999999999998544 3455544
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.92 E-value=1.4e-24 Score=172.68 Aligned_cols=100 Identities=39% Similarity=0.614 Sum_probs=85.8
Q ss_pred CcceeeEEEcCCeEEEEEEcCCCCccceEEEEE-CCEEEEEEEecccCcc--------CceeeEEEEEEECCCCCCCCcc
Q 028468 107 LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLE-QNTLVIRGEGGKEGED--------EESVRRYTSRIDLPEKLYRTDQ 177 (208)
Q Consensus 107 ~~p~~di~E~~d~y~l~vdLPG~~kedI~V~v~-~~~L~I~g~~~~~~~~--------e~~~~~f~r~i~LP~~v~d~~~ 177 (208)
+.|++||+|++++|+|.++|||+++++|+|+++ ++.|+|+|+++.+.++ |+.++.|.|+|.||.+| +.+.
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~ 120 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDA-KVEE 120 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCC-CGGG
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCc-cccc
Confidence 679999999999999999999999999999995 6899999998765432 33467899999999999 9999
Q ss_pred eEEEEeCCEEEEEEeCcCcccCCceEEeecC
Q 028468 178 IKAEMKNGVLKVTVPKVKEEERADVFQVKVD 208 (208)
Q Consensus 178 i~A~~~nGvL~I~lPK~~~~~~~~~i~I~IE 208 (208)
|+|+|+||||+|++||.+++ +++.+.|+|+
T Consensus 121 i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 121 VKAGLENGVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp CEEEEETTEEEEEEECCCCC-TTCCCCCCCC
T ss_pred eEEEEECCEEEEEEEccCcC-CCCCeEeeeC
Confidence 99999999999999998654 3445556653
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.91 E-value=8.9e-24 Score=156.32 Aligned_cols=89 Identities=30% Similarity=0.502 Sum_probs=80.3
Q ss_pred CcceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCcc--------CceeeEEEEEEECCCCCCCCcce
Q 028468 107 LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGED--------EESVRRYTSRIDLPEKLYRTDQI 178 (208)
Q Consensus 107 ~~p~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~--------e~~~~~f~r~i~LP~~v~d~~~i 178 (208)
+.|++||+|++++|+|.++|||+++++|+|+++++.|+|+|+++.+.+. |+..+.|.|+|.||.++ |.+.|
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~v-d~~~i 81 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSA-DADGI 81 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTB-CTTSC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCc-ChHHe
Confidence 6899999999999999999999999999999999999999998765432 34567999999999999 99999
Q ss_pred EEEEeCCEEEEEEeCcCc
Q 028468 179 KAEMKNGVLKVTVPKVKE 196 (208)
Q Consensus 179 ~A~~~nGvL~I~lPK~~~ 196 (208)
+|+|+||+|+|++||.++
T Consensus 82 ~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEEETTEEEEEEEBC--
T ss_pred EEEEeCCEEEEEEecCCC
Confidence 999999999999999854
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.91 E-value=1.2e-24 Score=167.11 Aligned_cols=107 Identities=20% Similarity=0.226 Sum_probs=81.6
Q ss_pred HHHHHHHhhcCCCCCCCCCCCcceeeEEEcCCeEEEEEEcCCCCccceEEEEEC-CEEEEEEEecccCcc-----Cceee
Q 028468 87 VLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQ-NTLVIRGEGGKEGED-----EESVR 160 (208)
Q Consensus 87 ~~~~md~l~~~~~~~~~~~~~~p~~di~E~~d~y~l~vdLPG~~kedI~V~v~~-~~L~I~g~~~~~~~~-----e~~~~ 160 (208)
|+++|+++|++.+.... ..+.|++||+|++++|+|.++|||+++++|+|++++ +.|+|+|+++.+... |+.+
T Consensus 4 ~~~em~~~~~~~~~~~~-~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~- 81 (123)
T 3aab_A 4 LGKELQKRSEELSRGFY-ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK- 81 (123)
T ss_dssp ----------CCCHHHH-HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-
T ss_pred HHHHHHHHHHHHhhhcc-ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-
Confidence 44556666655432111 125688999999999999999999999999999999 999999998765411 2334
Q ss_pred EEEEEEECCCCCCCCcce-EEEEeCCEEEEEEeCcCc
Q 028468 161 RYTSRIDLPEKLYRTDQI-KAEMKNGVLKVTVPKVKE 196 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~i-~A~~~nGvL~I~lPK~~~ 196 (208)
.|.|+|.||.+| +.++| +|.|+||+|+|++||.++
T Consensus 82 ~f~R~~~LP~~v-d~~~i~~A~~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 82 YVRKVIRLPYNV-AKDAEISGKYENGVLTIRIPIAGT 117 (123)
T ss_dssp EEEEEEECSSEE-CTTCCCEEEEETTEEEEEEEGGGE
T ss_pred EEEEEEECCCCc-CcchhCeeEEcCCEEEEEEEcCCC
Confidence 899999999999 99999 999999999999999854
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.91 E-value=1.7e-23 Score=155.79 Aligned_cols=91 Identities=22% Similarity=0.390 Sum_probs=82.6
Q ss_pred CCcceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCc---cCceeeEEEEEEECCCCCCCCcceEEEE
Q 028468 106 GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGE---DEESVRRYTSRIDLPEKLYRTDQIKAEM 182 (208)
Q Consensus 106 ~~~p~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~---~e~~~~~f~r~i~LP~~v~d~~~i~A~~ 182 (208)
.+.|++||+|++++|+|.++|||+++++|+|+++++.|+|+|+++.+.. .|+.++.|.|+|.||.+| |.+.|+|+|
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~v-d~~~i~A~~ 82 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPV-RPASGVASL 82 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCB-CTTCCEEEE
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCc-chhHcEEEE
Confidence 4789999999999999999999999999999999999999999865322 256788999999999999 999999999
Q ss_pred eCCEEEEEEeCcCcc
Q 028468 183 KNGVLKVTVPKVKEE 197 (208)
Q Consensus 183 ~nGvL~I~lPK~~~~ 197 (208)
+||+|+|++||.++.
T Consensus 83 ~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 83 AGGVLTVRFEKLRPT 97 (102)
T ss_dssp ETTEEEEEEEBSSCC
T ss_pred ECCEEEEEEEccCcc
Confidence 999999999998654
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.89 E-value=1e-22 Score=152.91 Aligned_cols=95 Identities=18% Similarity=0.364 Sum_probs=81.9
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCcc-CceeeEEEEEEECCCCCCCCcceEEEE-eCCEE
Q 028468 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGED-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 187 (208)
Q Consensus 110 ~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~i~A~~-~nGvL 187 (208)
..+|+|++++|.|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.+| |.+.|+|.| +||+|
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNV-DQSALSCSLSADGML 82 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTB-CTTSCEEEECTTSEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEE
Confidence 4799999999999999999999999999999999999987654332 23456899999999999 999999999 89999
Q ss_pred EEEEeCcCccc----CCceEEe
Q 028468 188 KVTVPKVKEEE----RADVFQV 205 (208)
Q Consensus 188 ~I~lPK~~~~~----~~~~i~I 205 (208)
+|++||.+++. +++.|.|
T Consensus 83 ~I~~PK~~~~~~~~~~~r~I~I 104 (106)
T 3l1e_A 83 TFSGPKIPSGVDAGHSERAIPV 104 (106)
T ss_dssp EEEEEBCCCCTTTTSSSCCCCC
T ss_pred EEEEEccCcccccCCCCeEeee
Confidence 99999987752 4555555
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.88 E-value=2.1e-22 Score=149.93 Aligned_cols=95 Identities=11% Similarity=0.201 Sum_probs=80.4
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCcc-CceeeEEEEEEECCCCCCCCcceEEEE-eCCEE
Q 028468 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGED-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 187 (208)
Q Consensus 110 ~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~i~A~~-~nGvL 187 (208)
.+||+|++++|.|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.+| |.+.|+|.| +||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGV-DPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTB-CTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHCEEEECCCCEE
Confidence 4799999999999999999999999999999999999998764433 23456799999999999 999999999 89999
Q ss_pred EEEEeCcCcccCCceEEee
Q 028468 188 KVTVPKVKEEERADVFQVK 206 (208)
Q Consensus 188 ~I~lPK~~~~~~~~~i~I~ 206 (208)
+|++||.++ .+++.+.|.
T Consensus 82 ~I~lPK~~~-~~~~~~~i~ 99 (101)
T 2wj5_A 82 SIQATPASA-QASLPSPPA 99 (101)
T ss_dssp EEEECBCCC-CCSSCC---
T ss_pred EEEEECCCc-CCCCCCccc
Confidence 999999854 445666664
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.87 E-value=8.6e-22 Score=142.25 Aligned_cols=82 Identities=21% Similarity=0.392 Sum_probs=70.6
Q ss_pred EEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCcc-CceeeEEEEEEECCCCCCCCcceEEEEe-CCEEEEE
Q 028468 113 AKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGED-EESVRRYTSRIDLPEKLYRTDQIKAEMK-NGVLKVT 190 (208)
Q Consensus 113 i~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~i~A~~~-nGvL~I~ 190 (208)
+.|++++|.|.++|||++++||+|+++++.|+|+|+++...++ +..++.|.|+|.||.+| |.+.|+|.|+ ||+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~v-d~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGV-DPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTC-CGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChHHcEEEECCCCEEEEE
Confidence 4689999999999999999999999999999999998765332 33468999999999999 9999999998 9999999
Q ss_pred EeCcC
Q 028468 191 VPKVK 195 (208)
Q Consensus 191 lPK~~ 195 (208)
+||.+
T Consensus 81 lPK~k 85 (85)
T 3q9p_A 81 APMPK 85 (85)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99963
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.86 E-value=1.3e-21 Score=159.15 Aligned_cols=97 Identities=13% Similarity=0.310 Sum_probs=72.7
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCcc-CceeeEEEEEEECCCCCCCCcceEEEE-eCCEE
Q 028468 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGED-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 187 (208)
Q Consensus 110 ~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~i~A~~-~nGvL 187 (208)
.+||+|++++|+|.++|||+++|||+|+++++.|+|+|+++...++ +...+.|.|+|.||.+| |.++|+|+| +||||
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~V-d~~~i~A~~s~dGvL 143 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSLSSDGVL 143 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTC-CTTTCEEEECTTSCE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCc-ChhHeEEEEcCCCEE
Confidence 3799999999999999999999999999999999999998654332 23356799999999999 999999999 79999
Q ss_pred EEEEeCcCcccCCceEEeec
Q 028468 188 KVTVPKVKEEERADVFQVKV 207 (208)
Q Consensus 188 ~I~lPK~~~~~~~~~i~I~I 207 (208)
+|++||.++....+.|.|+.
T Consensus 144 ~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 144 TVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp EEEEECC-------------
T ss_pred EEEEECCCCCCCCeEEEEec
Confidence 99999986554446677653
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.85 E-value=6.9e-21 Score=167.56 Aligned_cols=118 Identities=18% Similarity=0.259 Sum_probs=95.4
Q ss_pred HHHHHHHHH-hhcCCCC---CCCCCCCcceeeEEEcCC----eEEEEEEcCCCCccceEEEEECCEEEEEEEecccCccC
Q 028468 85 SQVLNFMDQ-MTENPFF---SGTRGGLRRGWDAKETDD----ALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEDE 156 (208)
Q Consensus 85 ~~~~~~md~-l~~~~~~---~~~~~~~~p~~di~E~~d----~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e 156 (208)
..++++|++ .+++... ....+.+.|++||+|+++ +|+|.++|||+++|+|+|+++++.|+|+|+++.+.+++
T Consensus 71 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~ 150 (314)
T 2bol_A 71 ESVMKEMSAIQPREFHPELEYTQPGELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDA 150 (314)
T ss_dssp HHHHHHHHTCCCEECCTTTSSCSCCTTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCC
T ss_pred hhhhHhhhhhhHHHHhhhccCCccccCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCC
Confidence 345566666 3332211 111223679999999999 99999999999999999999999999999988766666
Q ss_pred ceeeEEEEEEECCCCCCCCcceEEEEe-CCEEEEEEeCcCcccCCceEEe
Q 028468 157 ESVRRYTSRIDLPEKLYRTDQIKAEMK-NGVLKVTVPKVKEEERADVFQV 205 (208)
Q Consensus 157 ~~~~~f~r~i~LP~~v~d~~~i~A~~~-nGvL~I~lPK~~~~~~~~~i~I 205 (208)
..++.|.|+|.||.+| |.+.|+|+|+ ||||+|++||.+++. +.|+|
T Consensus 151 r~~g~F~R~~~LP~~V-d~e~i~A~~~~nGVL~I~lPK~~~~~--~~I~i 197 (314)
T 2bol_A 151 AMSESVGRSIPLPPSV-DRNHIQATITTDDVLVIEAPVNEPNY--KAIKL 197 (314)
T ss_dssp CBCCCEEEEEECCTTB-CGGGCEEEECSSSEEEEEEEBSSCCT--TTEEE
T ss_pred EEEEEEEEEEECCCCc-cccccEEEEeCCCEEEEEEeccCccc--ceeec
Confidence 7889999999999999 9999999999 999999999986553 34554
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.84 E-value=1.6e-20 Score=136.77 Aligned_cols=83 Identities=17% Similarity=0.382 Sum_probs=68.6
Q ss_pred EEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCcc-CceeeEEEEEEECCCCCCCCcceEEEE-eCCEEEEEE
Q 028468 114 KETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGED-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVLKVTV 191 (208)
Q Consensus 114 ~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~i~A~~-~nGvL~I~l 191 (208)
.+++++|+|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.+| |.+.|+|.| +||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~v-d~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTB-CGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEEEEEE
Confidence 467899999999999999999999999999999998754322 23456899999999999 999999999 899999999
Q ss_pred eCcCcc
Q 028468 192 PKVKEE 197 (208)
Q Consensus 192 PK~~~~ 197 (208)
||.+++
T Consensus 81 pK~~~~ 86 (90)
T 2y1y_A 81 PRKQVS 86 (90)
T ss_dssp CBC---
T ss_pred EcCCCC
Confidence 998554
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.75 E-value=5.1e-18 Score=149.27 Aligned_cols=87 Identities=23% Similarity=0.457 Sum_probs=72.5
Q ss_pred cceeeEEEcC---CeEEEEEEc-CCCCccceEEEEECCEEEEEEEecccCcc----CceeeEEEEEEECCCCCCCCcceE
Q 028468 108 RRGWDAKETD---DALNLSIDM-PGLGKEDVRVSLEQNTLVIRGEGGKEGED----EESVRRYTSRIDLPEKLYRTDQIK 179 (208)
Q Consensus 108 ~p~~di~E~~---d~y~l~vdL-PG~~kedI~V~v~~~~L~I~g~~~~~~~~----e~~~~~f~r~i~LP~~v~d~~~i~ 179 (208)
...++|.+++ ++|+|+++| ||+++|||+|++++|.|+|+|+++.+.+. |+.++.|+|+|.||++| |.++|+
T Consensus 220 ~~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~i~ 298 (314)
T 2bol_A 220 KEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVV-DASKTQ 298 (314)
T ss_dssp CCEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEE-CGGGCE
T ss_pred CCCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCc-ChHHeE
Confidence 3457777765 479999999 99999999999999999999999876544 67889999999999999 999999
Q ss_pred EEEeCCEEEEEEeCcC
Q 028468 180 AEMKNGVLKVTVPKVK 195 (208)
Q Consensus 180 A~~~nGvL~I~lPK~~ 195 (208)
|+|+||||+|++||.+
T Consensus 299 A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 299 AEIVDGLMVVEAPLFK 314 (314)
T ss_dssp EEEETTEEEEEEEEEC
T ss_pred EEEeCCEEEEEEecCC
Confidence 9999999999999963
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.05 E-value=1.2e-09 Score=81.87 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=73.6
Q ss_pred CcceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCE
Q 028468 107 LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 186 (208)
Q Consensus 107 ~~p~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGv 186 (208)
..+.++++++.+.+.|.+++||+.+++++|.++++.|.|++.... ...|...+.|+..| +++..++.+.+|.
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~-------~~~y~~~~~L~~~I-~~e~s~~~~~~~~ 79 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS-------GEDYNLKLELLHPI-IPEQSTFKVLSTK 79 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT-------SSEEEEEECBSSCC-CGGGEEEEECSSS
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC-------CcEEEEEeeCCCcC-CccccEEEEECCE
Confidence 356799999999999999999999999999999999999987431 23788999999999 9999999999999
Q ss_pred EEEEEeCcCc
Q 028468 187 LKVTVPKVKE 196 (208)
Q Consensus 187 L~I~lPK~~~ 196 (208)
|.|+|+|.++
T Consensus 80 l~i~L~K~~~ 89 (114)
T 1rl1_A 80 IEIKLKKPEA 89 (114)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEEcCCC
Confidence 9999999754
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.04 E-value=8.6e-10 Score=79.25 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=72.5
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEE
Q 028468 108 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVL 187 (208)
Q Consensus 108 ~p~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL 187 (208)
.+.++++++.+.+.|.+.+||+.+++++|.++++.|.|++.... ...|...+.|+..| +++..++.+.+|.|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~-------~~~y~~~~~L~~~I-~~~~s~~~~~~~~l 73 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG-------EDAYYLQPRLFGKI-IPDKCKYEVLSTKI 73 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT-------SCCEEECCBBSSCB-CGGGCEEEECSSCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC-------CcEEEEeeEcCCcc-CchhEEEEEECCEE
Confidence 46799999999999999999999999999999999999986421 13688899999999 99999999999999
Q ss_pred EEEEeCcCc
Q 028468 188 KVTVPKVKE 196 (208)
Q Consensus 188 ~I~lPK~~~ 196 (208)
.|+|+|.++
T Consensus 74 ~i~L~K~~~ 82 (92)
T 2xcm_C 74 EICLAKADI 82 (92)
T ss_dssp EEEEEBSSS
T ss_pred EEEEEcCCC
Confidence 999999754
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.39 E-value=2.9e-06 Score=63.83 Aligned_cols=80 Identities=15% Similarity=0.342 Sum_probs=72.1
Q ss_pred CCcceeeEEEcCCeEEEEEEcCCCC--ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEE-
Q 028468 106 GLRRGWDAKETDDALNLSIDMPGLG--KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEM- 182 (208)
Q Consensus 106 ~~~p~~di~E~~d~y~l~vdLPG~~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~- 182 (208)
...|.+.|.++++.++|.+.+|-+. ..++++.++++.+..... .|--++.||..|.+.+.-+|+|
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~------------PYyLRL~lP~~vved~~~~A~YD 82 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYD 82 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET------------TEEEEEECSSCEECSTTCEEEEE
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC------------CeEEEEecCcceecCCCcceEEe
Confidence 3678999999999999999999876 789999999999999986 7888999999998888899999
Q ss_pred -eCCEEEEEEeCcCcc
Q 028468 183 -KNGVLKVTVPKVKEE 197 (208)
Q Consensus 183 -~nGvL~I~lPK~~~~ 197 (208)
++|.++|++||..+-
T Consensus 83 ~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 83 SKDECINVKVAKLNKN 98 (115)
T ss_dssp TTTTEEEEEEEESSTT
T ss_pred CCCcEEEEEEcCCcCC
Confidence 599999999997544
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.31 E-value=7e-07 Score=69.14 Aligned_cols=79 Identities=15% Similarity=0.361 Sum_probs=71.1
Q ss_pred CcceeeEEEcCCeEEEEEEcCCCC--ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEE--
Q 028468 107 LRRGWDAKETDDALNLSIDMPGLG--KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEM-- 182 (208)
Q Consensus 107 ~~p~~di~E~~d~y~l~vdLPG~~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~-- 182 (208)
..|.+.|.++++.++|.+.+|... ..++++.+++..+.+... .|.-++.||..|.+.+..+|+|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~------------PYyLRL~LP~~V~e~~~~kA~YD~ 69 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYDS 69 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS------------SSCEEECCSSCEECCSSCEEEEET
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC------------CeEEEecCCCeeecCCCcceeEec
Confidence 468899999999999999999999 899999999999999875 6778899999997888899999
Q ss_pred eCCEEEEEEeCcCcc
Q 028468 183 KNGVLKVTVPKVKEE 197 (208)
Q Consensus 183 ~nGvL~I~lPK~~~~ 197 (208)
+.|.|+|++||..+-
T Consensus 70 d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 70 KDECINVKVAKLNKN 84 (134)
T ss_dssp TTTEEEEEEEESSTT
T ss_pred cCCEEEEEEeCCCCC
Confidence 589999999997543
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.22 E-value=4.2e-06 Score=74.86 Aligned_cols=72 Identities=15% Similarity=0.219 Sum_probs=63.1
Q ss_pred ceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEE
Q 028468 109 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLK 188 (208)
Q Consensus 109 p~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~ 188 (208)
+++.|.+. .|.+++.|||+++++|++...++.|+|++ +.|.|.|.||..+....-..|+|+||.|+
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~------------g~~rR~i~LP~~L~~~~v~~A~~~~~~L~ 363 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEA------------GDQRRNIFLPPALSGRPITGAKFQNNYLI 363 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEE------------TTEEEEEECCTTTTTCCEEEEEEETTEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEE------------CCEeecccCCHHHcCCCccccEEECCEEE
Confidence 45555444 89999999999999999999999999998 48999999999986666788999999999
Q ss_pred EEEeCc
Q 028468 189 VTVPKV 194 (208)
Q Consensus 189 I~lPK~ 194 (208)
|++-..
T Consensus 364 i~~~~~ 369 (374)
T 3igf_A 364 ISFLEH 369 (374)
T ss_dssp EEECCC
T ss_pred EEEehh
Confidence 998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.00 E-value=8.8e-05 Score=56.39 Aligned_cols=81 Identities=14% Similarity=0.263 Sum_probs=69.7
Q ss_pred cceeeEEEcCCeEEEEEEcCCC---CccceEEEEECCEEEEEEEecccCccCceeeEEEEEEE-CCCCCCCCcceEEEEe
Q 028468 108 RRGWDAKETDDALNLSIDMPGL---GKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRID-LPEKLYRTDQIKAEMK 183 (208)
Q Consensus 108 ~p~~di~E~~d~y~l~vdLPG~---~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~-LP~~v~d~~~i~A~~~ 183 (208)
.+.++++++.+.+.|.|.+||+ .++++.|.++.+.|.|.+..... ..|.-.+. |-..| ++++-+..+.
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~-------~~y~~~~~~L~~~I-~~e~S~~~v~ 91 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNG-------KSYSMIVNNLLKPI-SVEGSSKKVK 91 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSS-------SCEEEEEECBSSCC-CTTTCEEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCC-------CcEEEEhHHhcCcc-CcccCEEEEe
Confidence 3468999999999999999999 89999999999999999853211 25777885 99999 9999999999
Q ss_pred CCEEEEEEeCcCc
Q 028468 184 NGVLKVTVPKVKE 196 (208)
Q Consensus 184 nGvL~I~lPK~~~ 196 (208)
.+.+.|+|-|.++
T Consensus 92 ~~kVei~L~K~~~ 104 (127)
T 1x5m_A 92 TDTVLILCRKKVE 104 (127)
T ss_dssp TTEEEEEEECSSS
T ss_pred CCEEEEEEEECCC
Confidence 9999999999754
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.92 E-value=0.0002 Score=54.17 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=69.1
Q ss_pred CCcceeeEEEcCCeEEEEEEcC-CC-CccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEe
Q 028468 106 GLRRGWDAKETDDALNLSIDMP-GL-GKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMK 183 (208)
Q Consensus 106 ~~~p~~di~E~~d~y~l~vdLP-G~-~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~ 183 (208)
+..+.+.+.++.+.+.|.|.|| |+ +.++|+|.++.+.|.|.+..... ..+.-...|...| +++.-...++
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~-------~~~~~~~~L~~~I-~~e~S~w~i~ 88 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENG-------ERVLMEGKLTHKI-NTESSLWSLE 88 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSS-------EEEEEEEEBSSCB-CTTTCEEEEC
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCC-------CceEEcccccCcC-CCcCCEEEEe
Confidence 3577899999999999999999 88 89999999999999998753111 1344567899999 9999999998
Q ss_pred CCE-EEEEEeCcCc
Q 028468 184 NGV-LKVTVPKVKE 196 (208)
Q Consensus 184 nGv-L~I~lPK~~~ 196 (208)
+|- |.|+|-|.++
T Consensus 89 ~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 89 PGKCVLVNLSKVGE 102 (124)
T ss_dssp TTSEEEEEECBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 885 9999999753
No 20
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.83 E-value=9.4e-05 Score=57.11 Aligned_cols=87 Identities=9% Similarity=0.106 Sum_probs=70.4
Q ss_pred cceeeEEEc-CCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCc----cCce-eeEEEEEEECCCCCCCCcceEEE
Q 028468 108 RRGWDAKET-DDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGE----DEES-VRRYTSRIDLPEKLYRTDQIKAE 181 (208)
Q Consensus 108 ~p~~di~E~-~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~----~e~~-~~~f~r~i~LP~~v~d~~~i~A~ 181 (208)
.+.++++++ .+.+.|.|.++++.+++++|.+..+.|.|......... .... ...|.-.+.|-..| ++++-+..
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I-~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLI-EPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCE-EEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccC-CchhCEEE
Confidence 567899999 99999999999999999999999999999975322100 0000 12677778899999 99999999
Q ss_pred EeCCEEEEEEeCcC
Q 028468 182 MKNGVLKVTVPKVK 195 (208)
Q Consensus 182 ~~nGvL~I~lPK~~ 195 (208)
+..+-+.|+|.|.+
T Consensus 98 v~~~kIeI~L~K~e 111 (134)
T 1wh0_A 98 FTASRIDICLRKRQ 111 (134)
T ss_dssp ECSSEEEEEEEESS
T ss_pred EeCCEEEEEEEECC
Confidence 99999999999974
No 21
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.78 E-value=0.00021 Score=54.54 Aligned_cols=81 Identities=19% Similarity=0.294 Sum_probs=67.5
Q ss_pred CCCcceeeEEEcCCeEEEEEEcC-C--CCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEE
Q 028468 105 GGLRRGWDAKETDDALNLSIDMP-G--LGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAE 181 (208)
Q Consensus 105 ~~~~p~~di~E~~d~y~l~vdLP-G--~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~ 181 (208)
|+..+.+.+.++.+.+.|.|.|| | +++++|+|.+..+.|.|..... .+.-...|...| +++.-...
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~----------~~~~~~~L~~~I-~~e~s~w~ 72 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQ----------PPVVDGELYNEV-KVEESSWL 72 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTS----------CCSBCSCBSSCB-CSTTCEEE
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCc----------eEEEeccccccc-ccccCEEE
Confidence 34678899999999999999999 6 8999999999999999987421 011234688899 99999999
Q ss_pred EeCC-EEEEEEeCcCc
Q 028468 182 MKNG-VLKVTVPKVKE 196 (208)
Q Consensus 182 ~~nG-vL~I~lPK~~~ 196 (208)
+++| .|.|+|-|..+
T Consensus 73 i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 73 IEDGKVVTVHLEKINK 88 (131)
T ss_dssp EETTTEEEEEEEBSSS
T ss_pred EcCCCEEEEEEEECCC
Confidence 9998 89999999864
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.77 E-value=0.00027 Score=53.29 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=67.7
Q ss_pred CCCcceeeEEEcCCeEEEEEEcC-C--CCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEE
Q 028468 105 GGLRRGWDAKETDDALNLSIDMP-G--LGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAE 181 (208)
Q Consensus 105 ~~~~p~~di~E~~d~y~l~vdLP-G--~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~ 181 (208)
|+..+.+.+.++.+.+.|+|.|| | ++.++|+|.+..+.|.|..... .+.-...|...| +++.-...
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~----------~~~~~g~L~~~I-~~deS~w~ 81 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ----------PAIIDGELYNEV-KVEESSWL 81 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS----------CCSEEEEBSSCB-CGGGCEEE
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc----------ceEEeccccccc-cccccEEE
Confidence 35678899999999999999999 4 7999999999999999876421 122345789999 99999999
Q ss_pred EeCC-EEEEEEeCcCc
Q 028468 182 MKNG-VLKVTVPKVKE 196 (208)
Q Consensus 182 ~~nG-vL~I~lPK~~~ 196 (208)
+++| .|.|+|-|.++
T Consensus 82 i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 82 IADGAVVTVHLEKINK 97 (121)
T ss_dssp EETTTEEEEEEEBSSS
T ss_pred EcCCCEEEEEEEECCC
Confidence 9998 99999999754
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.75 E-value=0.00022 Score=54.02 Aligned_cols=78 Identities=17% Similarity=0.186 Sum_probs=67.4
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEE
Q 028468 110 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKV 189 (208)
Q Consensus 110 ~~di~E~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I 189 (208)
.++++++.+.+.|+|.+|+. ++++|.++.+.|.+++..... ...|.-.+.|-..| +++..+..+.++-+.|
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~------~~~y~~~l~L~~~I-~~e~S~~~v~~~kiei 75 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD------NFKHLNEIDLFHCI-DPNDSKHKRTDRSILC 75 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT------TEEEEEEEEBSSCE-EEEEEEEEECSSCEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC------CceEEEEEEcccee-ccccCEEEECCCEEEE
Confidence 69999999999999999995 799999999999999864211 13688889999999 9999999998899999
Q ss_pred EEeCcCc
Q 028468 190 TVPKVKE 196 (208)
Q Consensus 190 ~lPK~~~ 196 (208)
+|.|.++
T Consensus 76 ~L~K~~~ 82 (125)
T 1ejf_A 76 CLRKGES 82 (125)
T ss_dssp EEEESST
T ss_pred EEEECCC
Confidence 9999754
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.57 E-value=0.00075 Score=53.23 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=66.5
Q ss_pred CcceeeEEEcCCeEEEEEEcC-CCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCC
Q 028468 107 LRRGWDAKETDDALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNG 185 (208)
Q Consensus 107 ~~p~~di~E~~d~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nG 185 (208)
..+.+.+.++.+.+.|+|.|| |++.++|+|.+..+.|.|.+.. . .+ -...|...| +++.-...+++|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg-------~---~~-l~g~L~~~I-~~eeS~w~i~~~ 79 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG-------R---EI-LKGKLFDST-IADEGTWTLEDR 79 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT-------E---EE-EEEEBSSCB-CGGGCEEEEECC
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC-------E---EE-Eeecccccc-CccccEEEEcCC
Confidence 457799999999999999998 8999999999999999998741 0 22 446799999 999999999988
Q ss_pred E-EEEEEeCcCc
Q 028468 186 V-LKVTVPKVKE 196 (208)
Q Consensus 186 v-L~I~lPK~~~ 196 (208)
- |.|+|-|.++
T Consensus 80 k~v~I~L~K~~~ 91 (157)
T 2rh0_A 80 KMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEEEEBSSC
T ss_pred cEEEEEEEEcCC
Confidence 4 9999999854
No 25
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.55 E-value=0.0006 Score=51.99 Aligned_cols=76 Identities=9% Similarity=0.227 Sum_probs=63.1
Q ss_pred cceeeEEEcCCeEEEEEEcC-CCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCE
Q 028468 108 RRGWDAKETDDALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 186 (208)
Q Consensus 108 ~p~~di~E~~d~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGv 186 (208)
.+.+.+.++.+.+.|.|.|| |+..++|+|.+..+.|.|.+.. .. .-...|...| +++.-...+++|-
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g----------~~-~~~~~L~~~I-~~e~S~w~i~~~k 71 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQG----------EI-VIDGELLHEV-DVSSLWWVINGDV 71 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETT----------EE-EEEEEBSSCE-EEEEEEEEEETTE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECC----------Ee-eEcccccccc-ccccCEEEEeCCE
Confidence 46799999999999999996 8999999999999999998731 02 3446789999 9999999999999
Q ss_pred EEEEEeCcC
Q 028468 187 LKVTVPKVK 195 (208)
Q Consensus 187 L~I~lPK~~ 195 (208)
|.|+|-|.+
T Consensus 72 v~i~L~K~~ 80 (131)
T 2o30_A 72 VDVNVTKKR 80 (131)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 999999973
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.36 E-value=0.00057 Score=53.57 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=66.3
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEE-CCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCE
Q 028468 108 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLE-QNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 186 (208)
Q Consensus 108 ~p~~di~E~~d~y~l~vdLPG~~kedI~V~v~-~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGv 186 (208)
.|.++++++.+.++|+|.+|++ ++++|.++ .+.|.+++. .. ....|.-.+.|=..| +++ -+.++...-
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~~------~~~~y~~~l~L~~~I-dpe-S~~~v~~~k 72 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-GA------QGERFEFSLELYGKI-MTE-YRKNVGLRN 72 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-TT------TTEEEEEEEEBSSCE-EEE-EEEEEESSS
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-cC------CCceEEEEeEhhhcc-ccc-ceEEecCCE
Confidence 5779999999999999999997 58999999 789999986 11 114788889999999 899 888888888
Q ss_pred EEEEEeCcCc
Q 028468 187 LKVTVPKVKE 196 (208)
Q Consensus 187 L~I~lPK~~~ 196 (208)
+.|+|.|.++
T Consensus 73 Iei~L~K~e~ 82 (150)
T 2kmw_A 73 IIFSIQKEER 82 (150)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999999753
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.00015 Score=55.73 Aligned_cols=84 Identities=11% Similarity=0.224 Sum_probs=61.5
Q ss_pred cceeeEEEcCCe-------EEEEEEcCCCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEE
Q 028468 108 RRGWDAKETDDA-------LNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKA 180 (208)
Q Consensus 108 ~p~~di~E~~d~-------y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A 180 (208)
.|.+.+.++.+. ++|+|.+|++ .+++|.++.+.|.|++....... ......|.-.+.|...| +++..+.
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g-~~~~~~y~~~l~L~~~I-dpe~S~~ 81 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVG-DENVHHYQLHIDLYKEI-IPEKTMH 81 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC--------CEEBCEEEECSSCC-CSSSEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccC-CccCceEEEEEEChhhc-cccccEE
Confidence 466777888766 9999999997 48899999999999976432000 00113688889999999 9999999
Q ss_pred EEeCCE-EEEEEeCcC
Q 028468 181 EMKNGV-LKVTVPKVK 195 (208)
Q Consensus 181 ~~~nGv-L~I~lPK~~ 195 (208)
.+.++. +.|+|.|.+
T Consensus 82 ~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKD 97 (134)
T ss_dssp EECCC--CEEEEEECS
T ss_pred EECCCEEEEEEEEECC
Confidence 999998 999999976
No 28
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=78.82 E-value=7.7 Score=27.33 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=27.8
Q ss_pred EEEEEEcC-CCCccceEEEEECCEEEEEEEeccc
Q 028468 120 LNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKE 152 (208)
Q Consensus 120 y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~ 152 (208)
|.-.+.|| +++.+.++-.+++|.|+|+..+.+.
T Consensus 63 f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 44478899 6899999999999999999977554
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=69.94 E-value=11 Score=25.74 Aligned_cols=34 Identities=21% Similarity=0.470 Sum_probs=29.0
Q ss_pred eEEEEEEECCCCCCCCcceEEEEeCCEEEEEEeCcC
Q 028468 160 RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVK 195 (208)
Q Consensus 160 ~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK~~ 195 (208)
..|.-.+.||. + +++.|+-.+++|.|+|.--+..
T Consensus 7 ~~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVNH-F-APDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECTT-T-CCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEcc
Confidence 37888899996 6 8999999999999999987654
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=68.10 E-value=15 Score=25.42 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=28.3
Q ss_pred EEEEEEECCCCCCCCcceEEEEeCCEEEEEEeCcCc
Q 028468 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKE 196 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK~~~ 196 (208)
.|.-.+.||. + +.+.|+-.+++|.|+|.--+..+
T Consensus 15 ~~~v~~~lPG-~-~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 15 HFVLYADLPG-I-DPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp EEEEEEECTT-S-CGGGCEEEEETTEEEEEEEECCG
T ss_pred EEEEEEECCC-C-CHHHEEEEEECCEEEEEEEEcCc
Confidence 5666788996 6 89999999999999999876543
No 31
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=64.39 E-value=26 Score=26.64 Aligned_cols=33 Identities=12% Similarity=0.160 Sum_probs=26.7
Q ss_pred EEEEEEECCCCCCCCcceEEEEeCCEEEEEEeCcC
Q 028468 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVK 195 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK~~ 195 (208)
.|.-.+.||. + +.+.|+-.+++|+|+|+--+..
T Consensus 67 ~~~v~~dlPG-~-~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 67 HIKVIAWLPG-V-NKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEEECTT-C-CGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEEECCC-C-ChHhEEEEEECCEEEEEEEEcc
Confidence 4444467886 6 8999999999999999987765
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=59.46 E-value=14 Score=26.04 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=28.2
Q ss_pred EEEEEEcC-CCCccceEEEE-ECCEEEEEEEecc
Q 028468 120 LNLSIDMP-GLGKEDVRVSL-EQNTLVIRGEGGK 151 (208)
Q Consensus 120 y~l~vdLP-G~~kedI~V~v-~~~~L~I~g~~~~ 151 (208)
|.-++.|| +++.+.|+-.+ ++|.|+|+..+..
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~~ 89 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEGVLSIQATPAS 89 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTSEEEEEECBCC
T ss_pred EEEEEECCCCcChhHCEEEECCCCEEEEEEECCC
Confidence 77889999 78999999999 7999999987654
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=59.07 E-value=15 Score=26.09 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=29.2
Q ss_pred EEEEEEcC-CCCccceEEEE-ECCEEEEEEEeccc
Q 028468 120 LNLSIDMP-GLGKEDVRVSL-EQNTLVIRGEGGKE 152 (208)
Q Consensus 120 y~l~vdLP-G~~kedI~V~v-~~~~L~I~g~~~~~ 152 (208)
|.=.+.|| +++.+.|+-.+ ++|.|+|+..+...
T Consensus 57 F~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~ 91 (106)
T 3l1e_A 57 FHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPS 91 (106)
T ss_dssp EEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCC
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEEccCc
Confidence 77789999 78999999999 79999999987654
No 34
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=57.35 E-value=23 Score=26.73 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=28.1
Q ss_pred eEEEEEEcC-CCCccceEEEEECCEEEEEEEeccc
Q 028468 119 ALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKE 152 (208)
Q Consensus 119 ~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~ 152 (208)
.|.-.+.|| ++..+.|+-.+++|.|+|+..+...
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEV 139 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCC
T ss_pred EEEEEEECCCCccccceEEEEECCEEEEEEEccCc
Confidence 355678898 6899999999999999999976543
No 35
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=54.02 E-value=33 Score=23.35 Aligned_cols=33 Identities=15% Similarity=0.403 Sum_probs=28.2
Q ss_pred EEEEEEECCCCCCCCcceEEEEeCCEEEEEEeCcC
Q 028468 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVK 195 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK~~ 195 (208)
.|.-.+.||. + +.+.|+-.+++|.|+|..-+..
T Consensus 7 ~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVKH-F-SPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECCC-C-cHHHeEEEEECCEEEEEEEEec
Confidence 6778899995 6 8999999999999999987643
No 36
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=53.05 E-value=57 Score=26.35 Aligned_cols=30 Identities=23% Similarity=0.109 Sum_probs=17.2
Q ss_pred eEEEEEEcCCCCccceEEEEECCEEEEEEE
Q 028468 119 ALNLSIDMPGLGKEDVRVSLEQNTLVIRGE 148 (208)
Q Consensus 119 ~y~l~vdLPG~~kedI~V~v~~~~L~I~g~ 148 (208)
.+.|+++-+.--.+.|++.+++++|.|+-+
T Consensus 42 ~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~ 71 (250)
T 3jx8_A 42 APYLSVTIDENLFDYLVTEVEGGTLKIYPK 71 (250)
T ss_dssp CCEEEEEEEGGGGGGEEEEEETTEEEEEEC
T ss_pred CceEEEEECccccceEEEEEECCEEEEEEc
Confidence 455555544333456666666666666654
No 37
>3ljy_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: PGE; 2.41A {Parabacteroides distasonis}
Probab=50.79 E-value=81 Score=25.31 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=15.3
Q ss_pred EEEEcCCCCccceEEEEECCEEEEEEE
Q 028468 122 LSIDMPGLGKEDVRVSLEQNTLVIRGE 148 (208)
Q Consensus 122 l~vdLPG~~kedI~V~v~~~~L~I~g~ 148 (208)
|+++-+.---+.|++.+++++|.|.-+
T Consensus 44 V~i~~~~nl~~~i~~~v~~g~L~I~~~ 70 (243)
T 3ljy_A 44 VEVTVDQNLHPYVNIEVKDRVLTIAFK 70 (243)
T ss_dssp EEEEEEGGGGGGEEEEEETTEEEEEEC
T ss_pred EEEEECcchhceEEEEEECCEEEEEEc
Confidence 444444333456666666666666654
No 38
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=49.11 E-value=17 Score=25.99 Aligned_cols=45 Identities=18% Similarity=0.278 Sum_probs=29.8
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECC-CCCCCCcceEEEEeCCE---EEEEEeC
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLP-EKLYRTDQIKAEMKNGV---LKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP-~~v~d~~~i~A~~~nGv---L~I~lPK 193 (208)
++.|+|+++++.++|+|.+ +..+ ..|| .. |+...+++. |.|..+.
T Consensus 20 P~gV~V~i~~~~VtVKGPk----------G~L~--~~~~h~~------v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPR----------GTLR--RDFNHIN------VELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEETTEEEEEETT----------EEEE--EECCSSC------CEEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEeCCEEEEECCC----------ceEE--EEeccCc------EEEEEcCCceeEEEEEccC
Confidence 4788999999999999964 2332 3444 33 445567766 7666554
No 39
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=48.60 E-value=41 Score=24.19 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=27.5
Q ss_pred EEEEEEECCCCCCCCcceEEEEeC-CEEEEEEeCcCc
Q 028468 161 RYTSRIDLPEKLYRTDQIKAEMKN-GVLKVTVPKVKE 196 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~i~A~~~n-GvL~I~lPK~~~ 196 (208)
.|.-.+.||. + +.+.|+-.+.+ |.|+|..-+..+
T Consensus 35 ~~~v~~~lPG-~-~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLAG-F-NKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECCS-C-CGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECCC-C-CHHHEEEEEeCCCEEEEEEEEecc
Confidence 4555577896 6 89999999999 999999987643
No 40
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=48.49 E-value=26 Score=27.96 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=23.6
Q ss_pred eeEEEcCC-eEEEEEEcCCCCccceEEEEECCEEEEEEE
Q 028468 111 WDAKETDD-ALNLSIDMPGLGKEDVRVSLEQNTLVIRGE 148 (208)
Q Consensus 111 ~di~E~~d-~y~l~vdLPG~~kedI~V~v~~~~L~I~g~ 148 (208)
+.+.+.++ .+.|+++-+.---+.|++.+++++|.|.-+
T Consensus 32 V~l~qg~~~~~~V~i~g~~nl~~~i~~~v~~g~L~I~~~ 70 (221)
T 3pet_A 32 IYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSID 70 (221)
T ss_dssp EEEEECSSSCCEEEEEEEHHHHTTEEEEEETTEEEEEEC
T ss_pred EEEEECCCCcEEEEEEEChhhcceEEEEEECCEEEEEEc
Confidence 34444332 566666654333457888888888888765
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=48.07 E-value=23 Score=27.89 Aligned_cols=45 Identities=22% Similarity=0.403 Sum_probs=32.0
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEEEeC
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK 193 (208)
++.|+|+++++.++|+|.+ +..++ .|+..+ +...+||.|.|..+.
T Consensus 11 P~gV~V~i~~~~VtVkGpk----------G~L~~--~~~~~v------~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK----------GELTR--TFHPDM------TITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEE--ECCTTC------EEEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC----------eEEEE--EcCCCE------EEEEeCCEEEEEcCC
Confidence 4788999999999999964 34444 345444 345689998887654
No 42
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=45.76 E-value=29 Score=24.47 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=30.3
Q ss_pred CCeEEEEEEcCC-CCccceEEEEECCEEEEEEEecc
Q 028468 117 DDALNLSIDMPG-LGKEDVRVSLEQNTLVIRGEGGK 151 (208)
Q Consensus 117 ~d~y~l~vdLPG-~~kedI~V~v~~~~L~I~g~~~~ 151 (208)
+..|.+.++|++ +.+++.+..+.++.|.|.-.+.+
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcCC
Confidence 567999999997 69999999999999999987653
No 43
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=44.48 E-value=15 Score=24.79 Aligned_cols=15 Identities=40% Similarity=0.472 Sum_probs=12.4
Q ss_pred cceEEEEeCCEEEEE
Q 028468 176 DQIKAEMKNGVLKVT 190 (208)
Q Consensus 176 ~~i~A~~~nGvL~I~ 190 (208)
..|+|.|+||||+--
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 469999999999743
No 44
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=42.63 E-value=28 Score=27.55 Aligned_cols=46 Identities=15% Similarity=0.260 Sum_probs=31.6
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEEEeC
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK 193 (208)
++.|+|+++++.++|+|.+ +..++.|. +.. ++...++|.|.|..+.
T Consensus 9 P~gV~v~i~~~~vtVkGpk----------G~L~~~~~-~~~------v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDN----------GSVTRRLW-YPD------IDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEEECC-CTT------CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC----------eEEEEEEE-CCe------EEEEEECCEEEEEcCC
Confidence 3788999999999999964 33333331 333 3455789998887654
No 45
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=41.48 E-value=24 Score=23.75 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=29.3
Q ss_pred CCeEEEEEEcCC-CCccceEEEEECCEEEEEEEecc
Q 028468 117 DDALNLSIDMPG-LGKEDVRVSLEQNTLVIRGEGGK 151 (208)
Q Consensus 117 ~d~y~l~vdLPG-~~kedI~V~v~~~~L~I~g~~~~ 151 (208)
+..|.+.++|++ +.+++.+..+.++.|.|.-.+.+
T Consensus 46 ~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 46 EDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp SCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred CcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 356999999997 68899999999999999887653
No 46
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=40.73 E-value=31 Score=27.18 Aligned_cols=44 Identities=16% Similarity=0.390 Sum_probs=30.9
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEEEe
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 192 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lP 192 (208)
++.|+|+++++.++|+|.+ +.-++. |+..+ +-.++++.|.|..+
T Consensus 12 P~gV~v~i~~~~v~VkGpk----------G~L~~~--~~~~v------~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPK----------GELEVP--VSPEM------RVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSS----------CEEEEE--CCTTS------EEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCC----------cEEEEE--eCCCE------EEEEECCEEEEEEC
Confidence 5789999999999999964 233333 45444 34467998888753
No 47
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=40.21 E-value=44 Score=26.01 Aligned_cols=33 Identities=15% Similarity=0.403 Sum_probs=27.6
Q ss_pred EEEEEEECCCCCCCCcceEEEEeCCEEEEEEeCcC
Q 028468 161 RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVK 195 (208)
Q Consensus 161 ~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK~~ 195 (208)
.|.-.+.||. + +.+.|+.++++|.|+|.--+.+
T Consensus 74 ~~~v~~dlPG-~-~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVKH-F-SPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCSS-C-CGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEcc
Confidence 6777788985 6 8999999999999999986643
No 48
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=36.40 E-value=46 Score=27.07 Aligned_cols=46 Identities=17% Similarity=0.231 Sum_probs=32.0
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEEEeCc
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKV 194 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK~ 194 (208)
++.|+|+++++.++|+|.+ +..++ .|+..+ +...++|.|.|..+..
T Consensus 39 P~gV~V~i~~~~VtVKGPk----------G~L~~--~~~~~v------~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPK----------GELTV--PYNTEL------TVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCC----------EEEEE--ECCCCe------EEEEECCEEEEEcCCC
Confidence 4788899999999999964 33333 334444 4457899988876543
No 49
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.23 E-value=59 Score=25.69 Aligned_cols=50 Identities=16% Similarity=0.257 Sum_probs=33.0
Q ss_pred EEEEcCCCCccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEEEe
Q 028468 122 LSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 192 (208)
Q Consensus 122 l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lP 192 (208)
-.+++| +.|+|+++++.++|+|.+ +.-++. |+. ..++-..+++.|.|..+
T Consensus 9 ~~I~IP----~gV~v~i~~~~V~VkGpk----------G~L~~~--~~~-----~~v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 9 EEVEIP----EGVEVTVEGYKVKVKGPK----------GELERE--FFW-----PGIQIFTEDGNVVIYKD 58 (184)
T ss_dssp EEEECC----SSCEEEESSSEEEEECSS----------CEEEEE--CCC-----TTCEEEEETTEEEEECS
T ss_pred EEEeCC----CCcEEEEeCCEEEEEcCC----------eEEEEE--ecC-----CcEEEEEeCCEEEEEEC
Confidence 345554 789999999999999964 233333 331 12445578898888753
No 50
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=33.58 E-value=39 Score=24.27 Aligned_cols=17 Identities=35% Similarity=0.653 Sum_probs=14.9
Q ss_pred ceEEEEeCCEEEEEEeC
Q 028468 177 QIKAEMKNGVLKVTVPK 193 (208)
Q Consensus 177 ~i~A~~~nGvL~I~lPK 193 (208)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 48899999999999974
No 51
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=32.35 E-value=52 Score=26.18 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=31.4
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEE--eCCEEEEEEeC
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEM--KNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~--~nGvL~I~lPK 193 (208)
|+.|+|+++++.++|+|.+ +.-++ .|+. ..++-.+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPk----------G~L~~--~~~~-----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPR----------GKLTR--NFKH-----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEE--ECCC-----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCCEEEEECCC----------ceEEE--EccC-----CcEEEEEEcCCCEEEEEECC
Confidence 4789999999999999964 23333 3431 1244556 78988887653
No 52
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A
Probab=30.25 E-value=94 Score=28.37 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=25.1
Q ss_pred ECCCCCCCCcceEEEEeCCEEEEEEeCcCcccCCceEEeecC
Q 028468 167 DLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 208 (208)
Q Consensus 167 ~LP~~v~d~~~i~A~~~nGvL~I~lPK~~~~~~~~~i~I~IE 208 (208)
.=|+.| .+.. .+..++|.|+++||.. .-.++.++.|
T Consensus 469 ~~P~~V-~p~~-~~~~~~~~~~~~lp~~----S~~vl~l~~~ 504 (504)
T 3ug3_A 469 ENPNVV-DITS-ETITVDTEFEHTFKPF----SCSVIEVELE 504 (504)
T ss_dssp SCTTSS-EEEE-EEEEECSEEEEEECTT----EEEEEEEEC-
T ss_pred CCCCEE-Eeee-eeEecCCEEEEEECCC----EEEEEEEEeC
Confidence 336667 5665 6777999999999986 2346666665
No 53
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=30.13 E-value=77 Score=25.17 Aligned_cols=46 Identities=24% Similarity=0.393 Sum_probs=31.0
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEE-EeCCEEEEEEeC
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAE-MKNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~-~~nGvL~I~lPK 193 (208)
|+.|+|+++++.++|+|.+ +.-++ .|+. + .++-. .++|.|.|..+-
T Consensus 13 P~gV~v~i~~~~V~VkGPk----------G~L~~--~~~~-~----~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPR----------GTLTK--NLKH-I----DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEE--ECTT-T----CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCC----------eEEEE--EccC-C----cEEEEEecCCeEEEEECC
Confidence 4889999999999999964 33333 3442 1 23334 468998888653
No 54
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=28.46 E-value=86 Score=22.65 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=29.9
Q ss_pred EEEcCCeEEEEEEc-CCCCccceEEEEECCEEEEEEEecc
Q 028468 113 AKETDDALNLSIDM-PGLGKEDVRVSLEQNTLVIRGEGGK 151 (208)
Q Consensus 113 i~E~~d~y~l~vdL-PG~~kedI~V~v~~~~L~I~g~~~~ 151 (208)
+.+.++.+.|.+.+ ||.+++.| ..+.++.|.|+..-..
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEecCC
Confidence 46677889999887 89999988 5678889998876443
No 55
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=27.40 E-value=33 Score=23.07 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=19.2
Q ss_pred CCCccceEEEEECCEEEEEEEec
Q 028468 128 GLGKEDVRVSLEQNTLVIRGEGG 150 (208)
Q Consensus 128 G~~kedI~V~v~~~~L~I~g~~~ 150 (208)
-|+.+.|.+....+.|.|+|+.-
T Consensus 17 sFd~e~i~L~T~~G~L~IkG~~L 39 (71)
T 2ks0_A 17 SFDPKEILLETIQGVLSIKGEKL 39 (71)
T ss_dssp EECSSEEEEEETTEEEEEEEECC
T ss_pred EECCCEEEEEeCceEEEEEcCCc
Confidence 35788999999999999999853
No 56
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=26.88 E-value=22 Score=29.21 Aligned_cols=46 Identities=22% Similarity=0.449 Sum_probs=30.7
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEEEeC
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPK 193 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~lPK 193 (208)
++.|+|+++++.++|+|.+. ..+ ..|+..+ +. . ..+||.|.|..+.
T Consensus 54 P~gV~V~i~~~~VtVKGPkG----------~L~--~~~~~~v-~i---~-~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPLG----------ELA--LTYPREV-EL---T-KEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESSSEEEECCSSC----------CEE--EECCSSC-EE---E-ECSSSCEEEECSS
T ss_pred CCCCEEEEeCCEEEEECCCe----------EEE--EEcCCCE-EE---E-EecCCEEEEEcCC
Confidence 46788899999999999653 222 3456555 32 0 4578888887654
No 57
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=24.07 E-value=85 Score=23.24 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=14.5
Q ss_pred eEEEEeCCEEEEEEeC
Q 028468 178 IKAEMKNGVLKVTVPK 193 (208)
Q Consensus 178 i~A~~~nGvL~I~lPK 193 (208)
+.+++.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7899999999999974
No 58
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=23.05 E-value=99 Score=24.86 Aligned_cols=40 Identities=10% Similarity=-0.017 Sum_probs=23.7
Q ss_pred cceeeEEEcCCeEEEEEEcCC---------CCccceEEEEEC---CEEEEEE
Q 028468 108 RRGWDAKETDDALNLSIDMPG---------LGKEDVRVSLEQ---NTLVIRG 147 (208)
Q Consensus 108 ~p~~di~E~~d~y~l~vdLPG---------~~kedI~V~v~~---~~L~I~g 147 (208)
.+.+.+.-.++.+.|...-.. +....++|.+.- ..|.++|
T Consensus 54 ~~~i~~~v~~g~L~I~~~~~~~~~~~~~~~~~~~~~~v~V~~p~L~~i~~~g 105 (250)
T 3jx8_A 54 FDYLVTEVEGGTLKIYPKSIKKGFNNNSYDLRPTVYKIKSNSKELKELNTVG 105 (250)
T ss_dssp GGGEEEEEETTEEEEEECBCTTTTTSCBCEEECSCEEEEEEESCCSEEEEES
T ss_pred cceEEEEEECCEEEEEEcCCccccccceeecCCcEEEEEEEccceeeEEecc
Confidence 455677777888888887441 123456666652 4555554
No 59
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=22.89 E-value=2e+02 Score=23.43 Aligned_cols=68 Identities=15% Similarity=0.118 Sum_probs=42.4
Q ss_pred EEEEEE---cCCCCccceEEEEE--CCEEEEEEEeccc-CccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEE
Q 028468 120 LNLSID---MPGLGKEDVRVSLE--QNTLVIRGEGGKE-GEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVT 190 (208)
Q Consensus 120 y~l~vd---LPG~~kedI~V~v~--~~~L~I~g~~~~~-~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~ 190 (208)
|.+.++ |||+..+==-+.++ +++|.+....... .+-+.. +...+++.|...- |.+.|... .+|.+.|.
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~-D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVK-DLETIEYI-GDNQFVIS 86 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCS-SEEEEEEC-STTEEEEE
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCC-ChHHeEEe-CCCEEEEE
Confidence 555554 89998763346665 5788876553211 111122 6789999998766 88888654 67766553
No 60
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=22.15 E-value=43 Score=26.28 Aligned_cols=43 Identities=19% Similarity=0.366 Sum_probs=29.8
Q ss_pred ccceEEEEECCEEEEEEEecccCccCceeeEEEEEEECCCCCCCCcceEEEEeCCEEEEEE
Q 028468 131 KEDVRVSLEQNTLVIRGEGGKEGEDEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTV 191 (208)
Q Consensus 131 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~i~A~~~nGvL~I~l 191 (208)
++.|+|+++++.++|+|.+.. .+ ..|+..| +-.++++.|.|..
T Consensus 11 P~gV~v~i~~~~V~VkGpkG~----------L~--~~~~~~v------~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKINGQVITIKGKNGE----------LT--RTLNDAV------EVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESSSEEECCBTTBC----------CE--EECCSSC------EEEEETTEEEEEC
T ss_pred CCCcEEEEeCCEEEEEcCCEE----------EE--EECCCCE------EEEEeCCEEEEEE
Confidence 478889999999999996532 22 3345444 4456889888873
No 61
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=21.79 E-value=1.2e+02 Score=22.04 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=22.2
Q ss_pred EEEEEECCCCCCCCcceEEEEeCCEEEEEE
Q 028468 162 YTSRIDLPEKLYRTDQIKAEMKNGVLKVTV 191 (208)
Q Consensus 162 f~r~i~LP~~v~d~~~i~A~~~nGvL~I~l 191 (208)
..-.|.||.++ +.+.+...++..-|.|.+
T Consensus 16 V~i~I~lp~~~-~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 16 INIQFPVTGDA-DSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEECC----CCSCEEEEEETTEEEEEE
T ss_pred EEEEEECCCCC-CccceEEEEECCEEEEEE
Confidence 34458899888 899999999999999987
No 62
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=21.76 E-value=53 Score=23.60 Aligned_cols=34 Identities=12% Similarity=0.364 Sum_probs=27.0
Q ss_pred EcCCeEEEEEEcCCCCccceEEEEE-----------CCEEEEEEE
Q 028468 115 ETDDALNLSIDMPGLGKEDVRVSLE-----------QNTLVIRGE 148 (208)
Q Consensus 115 E~~d~y~l~vdLPG~~kedI~V~v~-----------~~~L~I~g~ 148 (208)
++...|.|.+.||.-.-+.+++.+. .|.|+.+|.
T Consensus 33 ~~~~~Y~itF~~p~~~G~~~ef~v~~~~Y~~L~~Gd~G~Lt~QGT 77 (100)
T 3rd4_A 33 EITHYYQVTFRLTTDDRKDLVLNIDKSSYQNIEPEMKGRLFMQGS 77 (100)
T ss_dssp -CCCEEEEEEEESSSSCEEEEEECCHHHHHTCCTTCEEEEEEETT
T ss_pred CCceEEEEEEEecCCCCCeEEEEECHHHcCCCCCCCEEEEEEeee
Confidence 5567999999999888888888875 267888886
No 63
>2qzi_A Uncharacterized protein; APC86636, streptococcus thermophilus LMG 18311, structural G PSI-2, protein structure initiative; 2.20A {Streptococcus thermophilus}
Probab=20.84 E-value=97 Score=22.30 Aligned_cols=27 Identities=7% Similarity=0.386 Sum_probs=23.6
Q ss_pred CCCCCCCCcceEEEEeCCEEEEEEeCc
Q 028468 168 LPEKLYRTDQIKAEMKNGVLKVTVPKV 194 (208)
Q Consensus 168 LP~~v~d~~~i~A~~~nGvL~I~lPK~ 194 (208)
+|...++.++++..+.+++.+|.+|..
T Consensus 76 i~~~~~~~~~i~~~~~~~liEIsip~~ 102 (103)
T 2qzi_A 76 IDKDIVLMDKLRTVHTDKLIEISFPTT 102 (103)
T ss_dssp CCGGGBCTTCCEEEEETTEEEEEEEBC
T ss_pred ccccccccccceEeccCCeEEEEcccc
Confidence 566677999999999999999999964
Done!