BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028473
(208 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224071431|ref|XP_002303456.1| predicted protein [Populus trichocarpa]
gi|222840888|gb|EEE78435.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 126/175 (72%), Gaps = 11/175 (6%)
Query: 37 MQRLCNKLRTL-TLSSSRRLLFQSHAPIHRPFH-SAPSSKWRLSP-LFNYPSSSSSHITR 93
MQRLC KLR+L ++SSS RLL HR H +A S KW L+ L N SS +
Sbjct: 1 MQRLCTKLRSLASVSSSHRLLHPPPQSYHRHLHFAAASRKWNLNGSLLNTSSSLPIQL-- 58
Query: 94 CCSYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSY 153
PS+AA S +LP S +QVRHVSSR+RKKRRKP+TP TSKVKKIKMK+YSSY
Sbjct: 59 ------PSVAAMSSSRLSQLPHSLVQVRHVSSRERKKRRKPMTPRTSKVKKIKMKAYSSY 112
Query: 154 KSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
K RFRTMNDG +RRW EGK HNAH KSKKSKRRLRQP+ VP AYAKVMKKLNFCG
Sbjct: 113 KERFRTMNDGTIRRWREGKNHNAHSKSKKSKRRLRQPSTVPAAYAKVMKKLNFCG 167
>gi|440583722|emb|CCH47224.1| similar to 50S ribosomal protein L35 [Lupinus angustifolius]
Length = 196
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 112/178 (62%), Gaps = 23/178 (12%)
Query: 37 MQRLCNKLRTLTLSSSRRLL-------FQSHAPIHRPFHSAPSSKWRLSPLFNYPSSSSS 89
MQR KLR+ ++ SR+ L F HAP HS S+ P+FN+ SS S
Sbjct: 1 MQRCATKLRSFAVNYSRQSLPTPSPRRFFHHAPPQPFIHSLASTNLISRPIFNF-SSFSP 59
Query: 90 HITRCCSYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKS 149
R +P+ L +QVRHVSSR+RKKRRKP+TPVTSK+KK KMKS
Sbjct: 60 QSFRPSPFPTSLL---------------VQVRHVSSRERKKRRKPMTPVTSKLKKTKMKS 104
Query: 150 YSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFC 207
YSS+K RFR MNDG +RRW EGKRHNAHLKSK SKRRLR+P +VP AYAK +K L C
Sbjct: 105 YSSFKLRFRVMNDGNIRRWKEGKRHNAHLKSKISKRRLRKPGIVPAAYAKFLKGLKGC 162
>gi|357484741|ref|XP_003612658.1| 50S ribosomal protein L35 [Medicago truncatula]
gi|355513993|gb|AES95616.1| 50S ribosomal protein L35 [Medicago truncatula]
Length = 157
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 124/179 (69%), Gaps = 30/179 (16%)
Query: 37 MQRLCNKLRTLTLSS----SRRLLFQSHAPIHRPFHSA---PSSKWRLSPLFNYPSSSSS 89
MQRL KLR+L + S SRR L H + +P HSA P S+ PLFN+ S SS
Sbjct: 2 MQRLLPKLRSLAVQSLQPSSRRFL---HHSLPQPLHSASINPISR----PLFNF-SPSSL 53
Query: 90 HITRCCSYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKS 149
H S PSP +PSL +QVRHVSSR+RKK+RKP+TPV SK+KK KMKS
Sbjct: 54 H----KSLPSP---FSPSLV--------LQVRHVSSRERKKKRKPMTPVKSKLKKTKMKS 98
Query: 150 YSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
YSSYKSRFR MNDG RRW EGKRHNAHLKSK +KRRLR PALVP+AYAKVMKKL FCG
Sbjct: 99 YSSYKSRFRLMNDGTFRRWREGKRHNAHLKSKIAKRRLRLPALVPVAYAKVMKKLGFCG 157
>gi|358248355|ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycine max]
gi|255647090|gb|ACU24013.1| unknown [Glycine max]
Length = 156
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/164 (59%), Positives = 112/164 (68%), Gaps = 25/164 (15%)
Query: 45 RTLTLSSSRRLLFQSHAPIHRPFHSAPSSKWRLSPLFNYPSSSSSHITRCCSYPSPSLAA 104
+ L+ SSRRLL H+P +P HSA S +R+S PS SS S+PSPSL
Sbjct: 18 QVLSPPSSRRLLH--HSPPPQPLHSA--SNFRIS----RPSFISSSWPLHASHPSPSL-- 67
Query: 105 APSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQ 164
+QVRH SS++RK RKPV P SKVKK KMKSYSS+KSRFRTMNDG
Sbjct: 68 -------------VQVRHASSKERK--RKPVPPTVSKVKKTKMKSYSSFKSRFRTMNDGN 112
Query: 165 VRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
+RRW EGKRHNAHLKSKKSKRRLR+P +VP+AYAKVMKKLNF
Sbjct: 113 IRRWKEGKRHNAHLKSKKSKRRLRKPGIVPVAYAKVMKKLNFSA 156
>gi|224138324|ref|XP_002326574.1| predicted protein [Populus trichocarpa]
gi|222833896|gb|EEE72373.1| predicted protein [Populus trichocarpa]
Length = 123
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 83/93 (89%)
Query: 115 LSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRWHEGKRH 174
L +QVRHVSSR+RKK RKP+TP+TSKVKK KMK+YSSYK RFRTMNDG +RRW EGK H
Sbjct: 30 LQLVQVRHVSSRERKKNRKPMTPLTSKVKKFKMKAYSSYKDRFRTMNDGTIRRWREGKNH 89
Query: 175 NAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFC 207
NAHLKSKKS+RRLRQP+ VP AYAKVMKKL+FC
Sbjct: 90 NAHLKSKKSRRRLRQPSTVPAAYAKVMKKLSFC 122
>gi|297791165|ref|XP_002863467.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
gi|297309302|gb|EFH39726.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
Length = 170
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 37 MQRLCNKLRTLTLSSSRRLLFQSHAPIHRPFHSAPSSKWRLSPLFNYPSSSSSHITRCCS 96
MQR C KLR+++L S+R L F AP HR H +P+ L+ + +S T+
Sbjct: 1 MQRFCTKLRSISLQSNRNLSFSGAAP-HRLIHHSPTR--HLTTTLGFANS-----TKWSF 52
Query: 97 YPSPSLA--AAPSLCSFRLPLSFIQVRHVSSRDRKKRR----KPVTPVTSKVKKIKMKSY 150
P+ ++ S+ S +P F+QVR+++S+++ + +P TP+TSKVKK+K+K Y
Sbjct: 53 LPAAGVSPLNISSMGSTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFY 112
Query: 151 SSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFC 207
SS+K RF+ +NDG +RRW EGKRHNAHLKSKKSKRRLRQP LVP AYAKVMKKLNFC
Sbjct: 113 SSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFC 169
>gi|18422571|ref|NP_568647.1| Ribosomal protein L35 [Arabidopsis thaliana]
gi|21593524|gb|AAM65491.1| unknown [Arabidopsis thaliana]
gi|26450411|dbj|BAC42320.1| unknown protein [Arabidopsis thaliana]
gi|28827502|gb|AAO50595.1| unknown protein [Arabidopsis thaliana]
gi|332007889|gb|AED95272.1| Ribosomal protein L35 [Arabidopsis thaliana]
Length = 173
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 121/177 (68%), Gaps = 11/177 (6%)
Query: 37 MQRLCNKLRTLTLSSSRRLLFQSHAPIHRPFHSAPS-SKWRLSPLFNYPSSSS-SHITRC 94
MQR C KLR+++L S+R L F +P HR H +PS S+ + + +S+ S +
Sbjct: 1 MQRFCTKLRSISLQSNRNLSFYGASP-HRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAA 59
Query: 95 CSYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRR----KPVTPVTSKVKKIKMKSY 150
+PS S+ + +P F+QVR+++S+++ + +P TP+TSKVKK+K+K Y
Sbjct: 60 GVFPS----NVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFY 115
Query: 151 SSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFC 207
SS+K RF+ +NDG +RRW EGKRHNAHLKSKKSKRRLRQP LVP AYAKVMKKLNFC
Sbjct: 116 SSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFC 172
>gi|356531483|ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808184 [Glycine max]
Length = 155
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 109/182 (59%), Gaps = 41/182 (22%)
Query: 37 MQRLCNKLRTLTLSS--------SRRLLFQSHAPIHRPFHSAPSSKWRLSPLFNYPSSSS 88
M R KLR L + S SRRLL H P + HSA N+ SS
Sbjct: 1 MLRSLTKLRCLAVQSRQVLSPPSSRRLLH--HLPPPQSLHSAS----------NFRISSP 48
Query: 89 SHITRCC----SYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKK 144
S I C S PSPSL +QVRH SS++RK RKPV P SKVKK
Sbjct: 49 SFIFSWCPPHASQPSPSL---------------VQVRHASSKERK--RKPVPPTVSKVKK 91
Query: 145 IKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMKSYSS+KSRFR MNDG +RRW EGKRHNAHLKSKKSKRRLR+P +VP AYAKVMKKL
Sbjct: 92 TKMKSYSSFKSRFRAMNDGNIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYAKVMKKL 151
Query: 205 NF 206
NF
Sbjct: 152 NF 153
>gi|255647366|gb|ACU24149.1| unknown [Glycine max]
Length = 155
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 108/182 (59%), Gaps = 41/182 (22%)
Query: 37 MQRLCNKLRTLTLSS--------SRRLLFQSHAPIHRPFHSAPSSKWRLSPLFNYPSSSS 88
M R KLR L + S SRRLL H P + HSA N+ SS
Sbjct: 1 MLRSLTKLRCLAVQSRQVLSPPSSRRLLH--HLPPPQSLHSAS----------NFRISSP 48
Query: 89 SHITRCC----SYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKK 144
S I C S PSPSL +QVRH SS++RK RKPV P SKVKK
Sbjct: 49 SFIFSWCPPHASQPSPSL---------------VQVRHASSKERK--RKPVPPTVSKVKK 91
Query: 145 IKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMKSYSS+KSRFR MNDG +RRW EGKRHNAHLKSKKSKRRLR+P +VP AY KVMKKL
Sbjct: 92 TKMKSYSSFKSRFRAMNDGNIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYTKVMKKL 151
Query: 205 NF 206
NF
Sbjct: 152 NF 153
>gi|225463238|ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240778 [Vitis vinifera]
Length = 165
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 116/184 (63%), Gaps = 31/184 (16%)
Query: 37 MQRLCNKLRTLTLSSS---------RRLLFQSHAP-IHRPFHSAPSSKWRLSPLFNYPSS 86
MQR C KL +L S RRLL H+P HR SA + PLFN +S
Sbjct: 1 MQRWCAKLGSLATSWQNQPFMAPQWRRLL--HHSPQFHRSLPSASITTSNFVPLFNAAAS 58
Query: 87 SSS--HITRCCSYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKK 144
SS H R S LPL + VRH SS+D+ KRR P+TPVTSK+KK
Sbjct: 59 SSMAAHFFR----------------SSLLPLYVVPVRHFSSKDKNKRR-PITPVTSKIKK 101
Query: 145 IKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
IKMKSYSS+K RFR MNDG +RRW EGKRHNAHLKSKK+KRRLRQPALVP AYAKVMKKL
Sbjct: 102 IKMKSYSSFKMRFRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKKL 161
Query: 205 NFCG 208
NFC
Sbjct: 162 NFCA 165
>gi|449453326|ref|XP_004144409.1| PREDICTED: uncharacterized protein LOC101219338 [Cucumis sativus]
gi|449500078|ref|XP_004160998.1| PREDICTED: uncharacterized LOC101219338 [Cucumis sativus]
Length = 168
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 119/180 (66%), Gaps = 20/180 (11%)
Query: 37 MQRLCNKLRT--------LTLSSSRRLLFQSHAPIHRPFHSAPSSKWRLSPLFNYPSSSS 88
M R C KLR+ L SS R +F S +++P H + S+ LFN +S
Sbjct: 1 MLRCCAKLRSAAAKPSQILNSVSSTRRIFHSAPSLYQPLHFS-SNNLNSRSLFN--ASQQ 57
Query: 89 SHITRCCSYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMK 148
+H SP LAA + S LPLS +QVRHVSSRDR+ +RKP TP TSK+KK K+K
Sbjct: 58 TH--------SP-LAAYQCIRSSPLPLSVVQVRHVSSRDRRNKRKPTTPATSKLKKTKLK 108
Query: 149 SYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
+YSSYKSRF M DG ++R EGKRHNAH KSK+SKR+LR+PA+VPLAYAKVMKKLNFC
Sbjct: 109 AYSSYKSRFWLMKDGSIKRRMEGKRHNAHSKSKRSKRKLRKPAIVPLAYAKVMKKLNFCS 168
>gi|296083384|emb|CBI23273.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Query: 113 LPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRWHEGK 172
LPL + VRH SS+D+ KRR P+TPVTSK+KKIKMKSYSS+K RFR MNDG +RRW EGK
Sbjct: 51 LPLYVVPVRHFSSKDKNKRR-PITPVTSKIKKIKMKSYSSFKMRFRVMNDGNIRRWREGK 109
Query: 173 RHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
RHNAHLKSKK+KRRLRQPALVP AYAKVMKKLNFC
Sbjct: 110 RHNAHLKSKKAKRRLRQPALVPAAYAKVMKKLNFCA 145
>gi|10177933|dbj|BAB11198.1| unnamed protein product [Arabidopsis thaliana]
Length = 262
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 113/169 (66%), Gaps = 11/169 (6%)
Query: 37 MQRLCNKLRTLTLSSSRRLLFQSHAPIHRPFHSAPS-SKWRLSPLFNYPSSSS-SHITRC 94
MQR C KLR+++L S+R L F +P HR H +PS S+ + + +S+ S +
Sbjct: 1 MQRFCTKLRSISLQSNRNLSFYGASP-HRLIHHSPSPSRHLTTTTLGFANSTKWSFVPAA 59
Query: 95 CSYPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRR----KPVTPVTSKVKKIKMKSY 150
+PS S+ + +P F+QVR+++S+++ + +P TP+TSKVKK+K+K Y
Sbjct: 60 GVFPS----NVSSMGTTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFY 115
Query: 151 SSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAK 199
SS+K RF+ +NDG +RRW EGKRHNAHLKSKKSKRRLRQP LVP AYAK
Sbjct: 116 SSFKDRFKPLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAK 164
>gi|12039379|gb|AAG46165.1|AC018727_17 unknown protein [Oryza sativa Japonica Group]
gi|31433700|gb|AAP55179.1| ribosomal protein L35 containing protein, expressed [Oryza sativa
Japonica Group]
gi|125533087|gb|EAY79652.1| hypothetical protein OsI_34796 [Oryza sativa Indica Group]
gi|125575818|gb|EAZ17102.1| hypothetical protein OsJ_32601 [Oryza sativa Japonica Group]
Length = 156
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 107/176 (60%), Gaps = 26/176 (14%)
Query: 37 MQRLCNKLRTLTLSSSRRLLFQS-HAPIHRPF--HSAPSSKWRLSPLFNYPSSSSSHITR 93
M+R C L RRLL S AP HRP H PS + PL P SS H+
Sbjct: 1 MRRWCA---AAGLGLGRRLLSSSVSAPAHRPLPAHLIPSPR----PL---PFSSRHHLL- 49
Query: 94 CCSYPSPSLAAAPSLCSFRLPLSFI--QVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYS 151
+P L PS P+ + QVRH +++DR R P TP TSKVKK K+K S
Sbjct: 50 -----TPPLGLHPSSPP---PMQWQTQQVRHFAAKDRS--RAPRTPTTSKVKKYKIKPPS 99
Query: 152 SYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFC 207
S K RFR MNDGQVRRW GKRHNAHLKSK++KRRLR+PALV LAYAKV+KKLNFC
Sbjct: 100 SMKFRFRVMNDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKKLNFC 155
>gi|115483676|ref|NP_001065508.1| Os10g0579500 [Oryza sativa Japonica Group]
gi|113640040|dbj|BAF27345.1| Os10g0579500, partial [Oryza sativa Japonica Group]
Length = 152
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 103/164 (62%), Gaps = 23/164 (14%)
Query: 49 LSSSRRLLFQS-HAPIHRPF--HSAPSSKWRLSPLFNYPSSSSSHITRCCSYPSPSLAAA 105
L RRLL S AP HRP H PS + PL P SS H+ +P L
Sbjct: 6 LGLGRRLLSSSVSAPAHRPLPAHLIPSPR----PL---PFSSRHHLL------TPPLGLH 52
Query: 106 PSLCSFRLPLSFI--QVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDG 163
PS P+ + QVRH +++DR R P TP TSKVKK K+K SS K RFR MNDG
Sbjct: 53 PSSPP---PMQWQTQQVRHFAAKDRS--RAPRTPTTSKVKKYKIKPPSSMKFRFRVMNDG 107
Query: 164 QVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFC 207
QVRRW GKRHNAHLKSK++KRRLR+PALV LAYAKV+KKLNFC
Sbjct: 108 QVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKKLNFC 151
>gi|357147607|ref|XP_003574407.1| PREDICTED: uncharacterized protein LOC100844694 [Brachypodium
distachyon]
Length = 162
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
Query: 112 RLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRWHEG 171
R P+ +Q+RH + + R R P+TP SKVKK KMK+ SS K RF+T+ DGQ+RRW G
Sbjct: 68 RPPVMAMQLRHYAIKGRS--RAPITPTVSKVKKYKMKAPSSMKFRFKTLKDGQIRRWCAG 125
Query: 172 KRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
KRHNAHLKSK++KRRLR+PALV LAYAKV+KKLNFCG
Sbjct: 126 KRHNAHLKSKQAKRRLRKPALVHLAYAKVIKKLNFCG 162
>gi|326496939|dbj|BAJ98496.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506240|dbj|BAJ86438.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512512|dbj|BAJ99611.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522891|dbj|BAJ88491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 158
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 100/165 (60%), Gaps = 17/165 (10%)
Query: 53 RRLLFQSHAPIHRPFHSAPSSKWRLSPLFNYP-----SSSSSHITRCCSYPSPSLAA--- 104
RR S + R F SAP++ P+ + P S S SH P P + +
Sbjct: 2 RRWCCSSAGGLARRFLSAPTAVHARPPVPSLPFRRDHSHSHSHA------PLPIMGSLFH 55
Query: 105 -APSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDG 163
A + R P+ +Q+RH + + R R P TP SKVKK KMK+ SS K RFRTM DG
Sbjct: 56 SAAAAAIVRPPVMAMQLRHYAIKGRS--RAPTTPTISKVKKYKMKAPSSMKFRFRTMKDG 113
Query: 164 QVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
Q+RRW GKRHNAH KSK++KRRLR+PALV LAYAKV+KKLNFCG
Sbjct: 114 QIRRWRAGKRHNAHQKSKEAKRRLRKPALVHLAYAKVIKKLNFCG 158
>gi|294464379|gb|ADE77702.1| unknown [Picea sitchensis]
Length = 167
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 3/95 (3%)
Query: 114 PLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRWHEGKR 173
PL IQ R ++ KK K ++ SK+KK KMKSYSSYK RFRT+ G +RRW GKR
Sbjct: 76 PLLMIQKR---TKTAKKVVKRLSAPPSKLKKTKMKSYSSYKFRFRTLTSGLIRRWRAGKR 132
Query: 174 HNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
HNAH KSKKSKRRLRQPA+V AYAKVMK+LNFCG
Sbjct: 133 HNAHSKSKKSKRRLRQPAIVTPAYAKVMKRLNFCG 167
>gi|242034929|ref|XP_002464859.1| hypothetical protein SORBIDRAFT_01g027760 [Sorghum bicolor]
gi|241918713|gb|EER91857.1| hypothetical protein SORBIDRAFT_01g027760 [Sorghum bicolor]
Length = 164
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 85/110 (77%), Gaps = 7/110 (6%)
Query: 100 PSLAAAPSLCSFRLPLSF-IQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFR 158
P++A++P FR P + QVRH + ++R R P+TP SKVKK K+K+ SS K RFR
Sbjct: 61 PAIASSP----FRPPSAHHQQVRHYAKKERS--RAPLTPTKSKVKKYKIKAPSSMKFRFR 114
Query: 159 TMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
TM DGQVRRW GKRHNAHLKSK++KRRLR+PALV LAYAKV+KKLNFCG
Sbjct: 115 TMKDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKKLNFCG 164
>gi|226529664|ref|NP_001149648.1| ribosomal protein L35 containing protein precursor [Zea mays]
gi|195628799|gb|ACG36227.1| ribosomal protein L35 containing protein [Zea mays]
gi|223943669|gb|ACN25918.1| unknown [Zea mays]
gi|414867976|tpg|DAA46533.1| TPA: Ribosomal protein L35 containing protein [Zea mays]
Length = 163
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
Query: 119 QVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHL 178
QVRH + ++R R P+TP SKVKK KMK+ SS K RFRTM DGQVRRW GKRHNAHL
Sbjct: 76 QVRHYAKKERS--RAPLTPTKSKVKKYKMKAPSSMKFRFRTMKDGQVRRWRAGKRHNAHL 133
Query: 179 KSKKSKRRLRQPALVPLAYAKVMKKLNFCG 208
KSK++KRRLR+PALV LAYAKV+KKLNFCG
Sbjct: 134 KSKEAKRRLRKPALVHLAYAKVIKKLNFCG 163
>gi|414867975|tpg|DAA46532.1| TPA: hypothetical protein ZEAMMB73_280712 [Zea mays]
Length = 62
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 147 MKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLNF 206
MK+ SS K RFRTM DGQVRRW GKRHNAHLKSK++KRRLR+PALV LAYAKV+KKLNF
Sbjct: 1 MKAPSSMKFRFRTMKDGQVRRWRAGKRHNAHLKSKEAKRRLRKPALVHLAYAKVIKKLNF 60
Query: 207 CG 208
CG
Sbjct: 61 CG 62
>gi|255557867|ref|XP_002519963.1| conserved hypothetical protein [Ricinus communis]
gi|223541009|gb|EEF42567.1| conserved hypothetical protein [Ricinus communis]
Length = 186
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 92/143 (64%), Gaps = 5/143 (3%)
Query: 37 MQRLCNKLRTLTLSSSRRLLFQSHAPIHRPFHSAPSSKWRLSPLFNYPSSSSSHITRCCS 96
MQ LC KLR+ S R L S + R HS S PL +S +T S
Sbjct: 1 MQTLCTKLRSFAGQSIRTLPAISLSG--RQLHS---SSQLYQPLIFASASRKWSLTNASS 55
Query: 97 YPSPSLAAAPSLCSFRLPLSFIQVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSR 156
+ PS+A L S + S +QVRHVSSR+R+KRRKP+TPV SKVKKIK+KSYSSYKSR
Sbjct: 56 FQFPSVAFQTPLRSSAVFPSLVQVRHVSSRERRKRRKPMTPVISKVKKIKIKSYSSYKSR 115
Query: 157 FRTMNDGQVRRWHEGKRHNAHLK 179
FRTMNDG +RRW EGKRHNAHLK
Sbjct: 116 FRTMNDGSIRRWKEGKRHNAHLK 138
>gi|145341436|ref|XP_001415815.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576038|gb|ABO94107.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 113
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
K+K+K YSSYK RF+ G++ R +GKRH A K+ K + RLR LV + M+K
Sbjct: 48 KVKIKPYSSYKGRFQVTASGKILRKRKGKRHCAFAKTPKQRMRLRSSTLVHETLMQPMRK 107
Query: 204 LNF 206
L F
Sbjct: 108 LGF 110
>gi|288818525|ref|YP_003432873.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
gi|384129278|ref|YP_005511891.1| 50S ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
gi|288787925|dbj|BAI69672.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
gi|308752115|gb|ADO45598.1| ribosomal protein L35 [Hydrogenobacter thermophilus TK-6]
Length = 66
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
K+KMKS S K RF+ G+++RWH G H K+K KRRLR+P LV + ++
Sbjct: 3 KVKMKSNRSAKKRFKITAKGKIKRWHAGGSHYNTKKAKDRKRRLRKPTLVNSGWEDKIRG 62
Query: 204 L 204
L
Sbjct: 63 L 63
>gi|412993730|emb|CCO14241.1| predicted protein [Bathycoccus prasinos]
Length = 143
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
+ K+K YSS+K RF G RR +GKRH K+ K +R+LR LV + M+K
Sbjct: 78 RTKIKGYSSWKGRFSVTASGLFRRKQKGKRHMGFSKTPKQRRQLRGTKLVDKTLERPMRK 137
Query: 204 LNF 206
L F
Sbjct: 138 LGF 140
>gi|168010095|ref|XP_001757740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691016|gb|EDQ77380.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 202
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 149 SYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKK 182
+YSSYK RFR M +G+ +RW GK+HNAH K+ K
Sbjct: 110 AYSSYKKRFRGMANGEYKRWRSGKQHNAHSKAIK 143
>gi|303273562|ref|XP_003056142.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462226|gb|EEH59518.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 186
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
K K+K YSS+K+RFR G+ R +GKRH A K+ + K LR LV + + MKK
Sbjct: 121 KTKIKPYSSWKARFRATATGKYARKQKGKRHKASSKTLRQKMLLRATKLVHNSLVQPMKK 180
Query: 204 LNF 206
L F
Sbjct: 181 LGF 183
>gi|384251226|gb|EIE24704.1| hypothetical protein COCSUDRAFT_32793 [Coccomyxa subellipsoidea
C-169]
Length = 172
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLN 205
K+K YSS+K RF+ G+V+ G RH KS R+LR+ +++ YAK MKKL
Sbjct: 107 KLKVYSSFKERFKLTGTGRVKYMPPGHRHRRSRKSADQNRQLRKSSMLFSTYAKTMKKLG 166
Query: 206 F 206
F
Sbjct: 167 F 167
>gi|195627172|gb|ACG35416.1| ribosomal protein L35 containing protein [Zea mays]
Length = 153
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 119 QVRHVSSRDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRW 168
QVRH + ++R R P+TP SKVKK KMK+ SS K RFRTM DGQVRRW
Sbjct: 76 QVRHYAKKERS--RAPLTPTKSKVKKYKMKAPSSMKFRFRTMKDGQVRRW 123
>gi|88855451|ref|ZP_01130115.1| 50S ribosomal protein L35 [marine actinobacterium PHSC20C1]
gi|88815358|gb|EAR25216.1| 50S ribosomal protein L35 [marine actinobacterium PHSC20C1]
Length = 64
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G+V + G RHN +KS K KR L Q ++ AKV+KKL
Sbjct: 3 KQKTHSGTKKRFKITGSGKVMKQQAGMRHNLEVKSGKRKRALNQDQVLASQDAKVIKKL 61
>gi|284033333|ref|YP_003383264.1| 50S ribosomal protein L35 [Kribbella flavida DSM 17836]
gi|283812626|gb|ADB34465.1| ribosomal protein L35 [Kribbella flavida DSM 17836]
Length = 64
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++S K R R G++RR G RH A KS K KRRL V +Y K KKL
Sbjct: 3 KMKTHSGMKKRVRITGSGKIRREQTGIRHLAEAKSSKRKRRLSGTVEVAPSYVKKAKKL 61
>gi|308799017|ref|XP_003074289.1| unnamed protein product [Ostreococcus tauri]
gi|116000460|emb|CAL50140.1| unnamed protein product [Ostreococcus tauri]
Length = 84
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 146 KMKSYSSYKSRFRTMNDG-QVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+KSYSSY+ RF+ G ++ R +GKRH A K+ K +R LR+ V + MKKL
Sbjct: 22 KIKSYSSYRFRFKMSGSGRKIMRKQKGKRHCAFAKTPKRRRMLRKTTTVDATLVQPMKKL 81
Query: 205 NF 206
F
Sbjct: 82 GF 83
>gi|282890616|ref|ZP_06299139.1| hypothetical protein pah_c022o223 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175253|ref|YP_004652063.1| 50S ribosomal protein L35 [Parachlamydia acanthamoebae UV-7]
gi|281499613|gb|EFB41909.1| hypothetical protein pah_c022o223 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479611|emb|CCB86209.1| 50S ribosomal protein L35 [Parachlamydia acanthamoebae UV-7]
Length = 64
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ + +RF+ G+++R H GKRH KS K KR+L +PALV K K+L
Sbjct: 3 KMKTKKAVAARFKLTGTGKLKRGHPGKRHILTKKSPKRKRQLSKPALVDEGQLKTYKRL 61
>gi|289548237|ref|YP_003473225.1| 50S ribosomal protein L35 [Thermocrinis albus DSM 14484]
gi|289181854|gb|ADC89098.1| ribosomal protein L35 [Thermocrinis albus DSM 14484]
Length = 67
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
K+KMK+ S K RF+ G+++RW G H KSK KRRLR+ LV
Sbjct: 3 KVKMKTNRSAKKRFKVTATGKIKRWKAGGSHYNTKKSKDRKRRLRKATLV 52
>gi|400976515|ref|ZP_10803746.1| 50S ribosomal protein L35 [Salinibacterium sp. PAMC 21357]
Length = 64
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G+V + G RHN +KS K KR L Q ++ AK +KKL
Sbjct: 3 KQKTHSGTKKRFKITGSGKVMKQQAGMRHNLEVKSGKRKRSLNQDQVLAPQDAKTIKKL 61
>gi|350571286|ref|ZP_08939616.1| 50S ribosomal protein L35 [Neisseria wadsworthii 9715]
gi|349792557|gb|EGZ46412.1| 50S ribosomal protein L35 [Neisseria wadsworthii 9715]
Length = 71
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR A+V
Sbjct: 9 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTAMV 56
>gi|225024917|ref|ZP_03714109.1| hypothetical protein EIKCOROL_01805 [Eikenella corrodens ATCC
23834]
gi|224942321|gb|EEG23530.1| hypothetical protein EIKCOROL_01805 [Eikenella corrodens ATCC
23834]
Length = 65
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G ++R H KRH K+ K+KR+LR A+V
Sbjct: 3 KMKTKSSAKKRFKVLGNGGIKRAHAFKRHILTKKTTKNKRQLRGTAMV 50
>gi|225019252|ref|ZP_03708444.1| hypothetical protein CLOSTMETH_03205 [Clostridium methylpentosum
DSM 5476]
gi|224947883|gb|EEG29092.1| hypothetical protein CLOSTMETH_03205 [Clostridium methylpentosum
DSM 5476]
Length = 65
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ +G+V+R H K H + KS K KRRLRQ + V+KKL
Sbjct: 3 KQKTHSGAKKRFKLTKNGKVKRAHAFKSHILNKKSTKRKRRLRQGTYADVTNTAVIKKL 61
>gi|255066459|ref|ZP_05318314.1| conserved domain protein [Neisseria sicca ATCC 29256]
gi|288576252|ref|ZP_05978466.2| conserved domain protein [Neisseria mucosa ATCC 25996]
gi|255049339|gb|EET44803.1| conserved domain protein [Neisseria sicca ATCC 29256]
gi|288565907|gb|EFC87467.1| conserved domain protein [Neisseria mucosa ATCC 25996]
Length = 97
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 35 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 82
>gi|419797997|ref|ZP_14323444.1| ribosomal protein L35 [Neisseria sicca VK64]
gi|385696531|gb|EIG27009.1| ribosomal protein L35 [Neisseria sicca VK64]
Length = 97
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 35 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 82
>gi|340363115|ref|ZP_08685466.1| 50S ribosomal protein L35 [Neisseria macacae ATCC 33926]
gi|339886639|gb|EGQ76278.1| 50S ribosomal protein L35 [Neisseria macacae ATCC 33926]
Length = 97
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 35 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 82
>gi|333376066|ref|ZP_08467860.1| 50S ribosomal protein L35 [Kingella kingae ATCC 23330]
gi|381401409|ref|ZP_09926312.1| 50S ribosomal protein L35 [Kingella kingae PYKK081]
gi|332969047|gb|EGK08087.1| 50S ribosomal protein L35 [Kingella kingae ATCC 23330]
gi|380833559|gb|EIC13424.1| 50S ribosomal protein L35 [Kingella kingae PYKK081]
Length = 65
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 3 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 50
>gi|15676620|ref|NP_273764.1| 50S ribosomal protein L35 [Neisseria meningitidis MC58]
gi|59800745|ref|YP_207457.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA 1090]
gi|121634519|ref|YP_974764.1| 50S ribosomal protein L35 [Neisseria meningitidis FAM18]
gi|218767844|ref|YP_002342356.1| 50S ribosomal protein L35 [Neisseria meningitidis Z2491]
gi|240013611|ref|ZP_04720524.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI18]
gi|240016050|ref|ZP_04722590.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA6140]
gi|240120681|ref|ZP_04733643.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID24-1]
gi|254493205|ref|ZP_05106376.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 1291]
gi|254804603|ref|YP_003082824.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha14]
gi|268598468|ref|ZP_06132635.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
gi|268600821|ref|ZP_06134988.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
gi|268603126|ref|ZP_06137293.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
gi|268681607|ref|ZP_06148469.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
gi|268683835|ref|ZP_06150697.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
gi|268686076|ref|ZP_06152938.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
gi|329118118|ref|ZP_08246830.1| 50S ribosomal protein L35 [Neisseria bacilliformis ATCC BAA-1200]
gi|349610030|ref|ZP_08889392.1| 50S ribosomal protein L35 [Neisseria sp. GT4A_CT1]
gi|385324522|ref|YP_005878961.1| 50S ribosomal protein L35 [Neisseria meningitidis 8013]
gi|385328059|ref|YP_005882362.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha710]
gi|385337677|ref|YP_005891550.1| 50S ribosomal protein L35 [Neisseria meningitidis WUE 2594]
gi|385851613|ref|YP_005898128.1| 50S ribosomal protein L35 [Neisseria meningitidis M04-240196]
gi|385856877|ref|YP_005903389.1| 50S ribosomal protein L35 [Neisseria meningitidis NZ-05/33]
gi|421537674|ref|ZP_15983857.1| ribosomal protein L35 [Neisseria meningitidis 93003]
gi|421539901|ref|ZP_15986054.1| ribosomal protein L35 [Neisseria meningitidis 93004]
gi|421542130|ref|ZP_15988240.1| ribosomal protein L35 [Neisseria meningitidis NM255]
gi|421544096|ref|ZP_15990174.1| ribosomal protein L35 [Neisseria meningitidis NM140]
gi|421546206|ref|ZP_15992255.1| ribosomal protein L35 [Neisseria meningitidis NM183]
gi|421548475|ref|ZP_15994500.1| ribosomal protein L35 [Neisseria meningitidis NM2781]
gi|421550275|ref|ZP_15996280.1| ribosomal protein L35 [Neisseria meningitidis 69166]
gi|421552500|ref|ZP_15998474.1| ribosomal protein L35 [Neisseria meningitidis NM576]
gi|421554485|ref|ZP_16000426.1| ribosomal protein L35 [Neisseria meningitidis 98008]
gi|421556948|ref|ZP_16002857.1| ribosomal protein L35 [Neisseria meningitidis 80179]
gi|421558589|ref|ZP_16004467.1| ribosomal protein L35 [Neisseria meningitidis 92045]
gi|421560899|ref|ZP_16006752.1| ribosomal protein L35 [Neisseria meningitidis NM2657]
gi|421562947|ref|ZP_16008769.1| ribosomal protein L35 [Neisseria meningitidis NM2795]
gi|421565138|ref|ZP_16010924.1| ribosomal protein L35 [Neisseria meningitidis NM3081]
gi|421567168|ref|ZP_16012904.1| ribosomal protein L35 [Neisseria meningitidis NM3001]
gi|433464704|ref|ZP_20422189.1| ribosomal protein L35 [Neisseria meningitidis NM422]
gi|433466872|ref|ZP_20424329.1| ribosomal protein L35 [Neisseria meningitidis 87255]
gi|433468879|ref|ZP_20426308.1| ribosomal protein L35 [Neisseria meningitidis 98080]
gi|433471189|ref|ZP_20428580.1| ribosomal protein L35 [Neisseria meningitidis 68094]
gi|433473126|ref|ZP_20430490.1| ribosomal protein L35 [Neisseria meningitidis 97021]
gi|433475332|ref|ZP_20432673.1| ribosomal protein L35 [Neisseria meningitidis 88050]
gi|433477210|ref|ZP_20434533.1| ribosomal protein L35 [Neisseria meningitidis 70012]
gi|433479563|ref|ZP_20436857.1| ribosomal protein L35 [Neisseria meningitidis 63041]
gi|433481675|ref|ZP_20438940.1| ribosomal protein L35 [Neisseria meningitidis 2006087]
gi|433483661|ref|ZP_20440889.1| ribosomal protein L35 [Neisseria meningitidis 2002038]
gi|433485860|ref|ZP_20443061.1| ribosomal protein L35 [Neisseria meningitidis 97014]
gi|433487955|ref|ZP_20445123.1| ribosomal protein L35 [Neisseria meningitidis M13255]
gi|433490072|ref|ZP_20447202.1| ribosomal protein L35 [Neisseria meningitidis NM418]
gi|433492224|ref|ZP_20449318.1| ribosomal protein L35 [Neisseria meningitidis NM586]
gi|433494301|ref|ZP_20451371.1| ribosomal protein L35 [Neisseria meningitidis NM762]
gi|433496485|ref|ZP_20453526.1| ribosomal protein L35 [Neisseria meningitidis M7089]
gi|433498545|ref|ZP_20455554.1| ribosomal protein L35 [Neisseria meningitidis M7124]
gi|433500513|ref|ZP_20457499.1| ribosomal protein L35 [Neisseria meningitidis NM174]
gi|433502759|ref|ZP_20459724.1| ribosomal protein L35 [Neisseria meningitidis NM126]
gi|433504566|ref|ZP_20461506.1| ribosomal protein L35 [Neisseria meningitidis 9506]
gi|433506742|ref|ZP_20463655.1| ribosomal protein L35 [Neisseria meningitidis 9757]
gi|433509056|ref|ZP_20465929.1| ribosomal protein L35 [Neisseria meningitidis 12888]
gi|433510988|ref|ZP_20467820.1| ribosomal protein L35 [Neisseria meningitidis 4119]
gi|433513081|ref|ZP_20469875.1| ribosomal protein L35 [Neisseria meningitidis 63049]
gi|433515303|ref|ZP_20472075.1| ribosomal protein L35 [Neisseria meningitidis 2004090]
gi|433517228|ref|ZP_20473977.1| ribosomal protein L35 [Neisseria meningitidis 96023]
gi|433519448|ref|ZP_20476169.1| ribosomal protein L35 [Neisseria meningitidis 65014]
gi|433521549|ref|ZP_20478244.1| ribosomal protein L35 [Neisseria meningitidis 61103]
gi|433523686|ref|ZP_20480351.1| ribosomal protein L35 [Neisseria meningitidis 97020]
gi|433525671|ref|ZP_20482305.1| ribosomal protein L35 [Neisseria meningitidis 69096]
gi|433527837|ref|ZP_20484448.1| ribosomal protein L35 [Neisseria meningitidis NM3652]
gi|433530011|ref|ZP_20486604.1| ribosomal protein L35 [Neisseria meningitidis NM3642]
gi|433532269|ref|ZP_20488835.1| ribosomal protein L35 [Neisseria meningitidis 2007056]
gi|433534223|ref|ZP_20490768.1| ribosomal protein L35 [Neisseria meningitidis 2001212]
gi|433536407|ref|ZP_20492915.1| ribosomal protein L35 [Neisseria meningitidis 77221]
gi|433538602|ref|ZP_20495082.1| ribosomal protein L35 [Neisseria meningitidis 70030]
gi|433540581|ref|ZP_20497036.1| ribosomal protein L35 [Neisseria meningitidis 63006]
gi|54039205|sp|P66274.1|RL35_NEIMB RecName: Full=50S ribosomal protein L35
gi|54041902|sp|P66273.1|RL35_NEIMA RecName: Full=50S ribosomal protein L35
gi|75507419|sp|Q5F9U2.1|RL35_NEIG1 RecName: Full=50S ribosomal protein L35
gi|166231205|sp|A1KSY4.1|RL35_NEIMF RecName: Full=50S ribosomal protein L35
gi|7225949|gb|AAF41135.1| 50S ribosomal protein L35 [Neisseria meningitidis MC58]
gi|59717640|gb|AAW89045.1| putative 50s ribosomal protein L35 [Neisseria gonorrhoeae FA 1090]
gi|120866225|emb|CAM09965.1| 50S ribosomal protein L35 [Neisseria meningitidis FAM18]
gi|121051852|emb|CAM08158.1| putative 50S ribosomal protein L35 [Neisseria meningitidis Z2491]
gi|226512245|gb|EEH61590.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 1291]
gi|254668145|emb|CBA04774.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha14]
gi|254671882|emb|CBA04132.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha275]
gi|261392909|emb|CAX50490.1| 50S ribosomal protein L35 [Neisseria meningitidis 8013]
gi|268582599|gb|EEZ47275.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae MS11]
gi|268584952|gb|EEZ49628.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID18]
gi|268587257|gb|EEZ51933.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID1]
gi|268621891|gb|EEZ54291.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae PID332]
gi|268624119|gb|EEZ56519.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-92-679]
gi|268626360|gb|EEZ58760.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae SK-93-1035]
gi|308388911|gb|ADO31231.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha710]
gi|319410091|emb|CBY90427.1| 50S ribosomal protein L35 [Neisseria meningitidis WUE 2594]
gi|325206436|gb|ADZ01889.1| ribosomal protein L35 [Neisseria meningitidis M04-240196]
gi|325207766|gb|ADZ03218.1| ribosomal protein L35 [Neisseria meningitidis NZ-05/33]
gi|327465778|gb|EGF12051.1| 50S ribosomal protein L35 [Neisseria bacilliformis ATCC BAA-1200]
gi|348610800|gb|EGY60482.1| 50S ribosomal protein L35 [Neisseria sp. GT4A_CT1]
gi|389606201|emb|CCA45114.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha522]
gi|402318066|gb|EJU53591.1| ribosomal protein L35 [Neisseria meningitidis NM255]
gi|402318341|gb|EJU53864.1| ribosomal protein L35 [Neisseria meningitidis 93003]
gi|402320185|gb|EJU55676.1| ribosomal protein L35 [Neisseria meningitidis 93004]
gi|402323941|gb|EJU59379.1| ribosomal protein L35 [Neisseria meningitidis NM183]
gi|402324208|gb|EJU59644.1| ribosomal protein L35 [Neisseria meningitidis NM140]
gi|402326136|gb|EJU61541.1| ribosomal protein L35 [Neisseria meningitidis NM2781]
gi|402330490|gb|EJU65837.1| ribosomal protein L35 [Neisseria meningitidis 69166]
gi|402331132|gb|EJU66473.1| ribosomal protein L35 [Neisseria meningitidis NM576]
gi|402332445|gb|EJU67770.1| ribosomal protein L35 [Neisseria meningitidis 98008]
gi|402335633|gb|EJU70897.1| ribosomal protein L35 [Neisseria meningitidis 80179]
gi|402337332|gb|EJU72580.1| ribosomal protein L35 [Neisseria meningitidis 92045]
gi|402339379|gb|EJU74595.1| ribosomal protein L35 [Neisseria meningitidis NM2657]
gi|402341654|gb|EJU76827.1| ribosomal protein L35 [Neisseria meningitidis NM2795]
gi|402344179|gb|EJU79320.1| ribosomal protein L35 [Neisseria meningitidis NM3001]
gi|402345467|gb|EJU80584.1| ribosomal protein L35 [Neisseria meningitidis NM3081]
gi|432203448|gb|ELK59499.1| ribosomal protein L35 [Neisseria meningitidis 87255]
gi|432204191|gb|ELK60236.1| ribosomal protein L35 [Neisseria meningitidis NM422]
gi|432205272|gb|ELK61302.1| ribosomal protein L35 [Neisseria meningitidis 98080]
gi|432209678|gb|ELK65645.1| ribosomal protein L35 [Neisseria meningitidis 68094]
gi|432210727|gb|ELK66683.1| ribosomal protein L35 [Neisseria meningitidis 97021]
gi|432211150|gb|ELK67105.1| ribosomal protein L35 [Neisseria meningitidis 88050]
gi|432216432|gb|ELK72313.1| ribosomal protein L35 [Neisseria meningitidis 70012]
gi|432217366|gb|ELK73235.1| ribosomal protein L35 [Neisseria meningitidis 63041]
gi|432217506|gb|ELK73374.1| ribosomal protein L35 [Neisseria meningitidis 2006087]
gi|432221364|gb|ELK77174.1| ribosomal protein L35 [Neisseria meningitidis 2002038]
gi|432222906|gb|ELK78688.1| ribosomal protein L35 [Neisseria meningitidis 97014]
gi|432224421|gb|ELK80186.1| ribosomal protein L35 [Neisseria meningitidis M13255]
gi|432228647|gb|ELK84345.1| ribosomal protein L35 [Neisseria meningitidis NM418]
gi|432229013|gb|ELK84706.1| ribosomal protein L35 [Neisseria meningitidis NM586]
gi|432230975|gb|ELK86645.1| ribosomal protein L35 [Neisseria meningitidis NM762]
gi|432234379|gb|ELK89999.1| ribosomal protein L35 [Neisseria meningitidis M7124]
gi|432235185|gb|ELK90801.1| ribosomal protein L35 [Neisseria meningitidis M7089]
gi|432235804|gb|ELK91413.1| ribosomal protein L35 [Neisseria meningitidis NM174]
gi|432240855|gb|ELK96386.1| ribosomal protein L35 [Neisseria meningitidis NM126]
gi|432242081|gb|ELK97605.1| ribosomal protein L35 [Neisseria meningitidis 9506]
gi|432242807|gb|ELK98323.1| ribosomal protein L35 [Neisseria meningitidis 9757]
gi|432247870|gb|ELL03305.1| ribosomal protein L35 [Neisseria meningitidis 12888]
gi|432248479|gb|ELL03904.1| ribosomal protein L35 [Neisseria meningitidis 4119]
gi|432248758|gb|ELL04182.1| ribosomal protein L35 [Neisseria meningitidis 63049]
gi|432253891|gb|ELL09227.1| ribosomal protein L35 [Neisseria meningitidis 2004090]
gi|432254237|gb|ELL09572.1| ribosomal protein L35 [Neisseria meningitidis 96023]
gi|432255439|gb|ELL10768.1| ribosomal protein L35 [Neisseria meningitidis 65014]
gi|432260322|gb|ELL15581.1| ribosomal protein L35 [Neisseria meningitidis 61103]
gi|432260585|gb|ELL15843.1| ribosomal protein L35 [Neisseria meningitidis 97020]
gi|432261862|gb|ELL17107.1| ribosomal protein L35 [Neisseria meningitidis 69096]
gi|432266144|gb|ELL21332.1| ribosomal protein L35 [Neisseria meningitidis NM3652]
gi|432267939|gb|ELL23111.1| ribosomal protein L35 [Neisseria meningitidis NM3642]
gi|432268214|gb|ELL23385.1| ribosomal protein L35 [Neisseria meningitidis 2007056]
gi|432272733|gb|ELL27840.1| ribosomal protein L35 [Neisseria meningitidis 2001212]
gi|432274357|gb|ELL29445.1| ribosomal protein L35 [Neisseria meningitidis 77221]
gi|432274610|gb|ELL29697.1| ribosomal protein L35 [Neisseria meningitidis 70030]
gi|432277596|gb|ELL32642.1| ribosomal protein L35 [Neisseria meningitidis 63006]
Length = 65
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 3 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 50
>gi|298369382|ref|ZP_06980700.1| ribosomal protein L35 [Neisseria sp. oral taxon 014 str. F0314]
gi|298283385|gb|EFI24872.1| ribosomal protein L35 [Neisseria sp. oral taxon 014 str. F0314]
Length = 86
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 24 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 71
>gi|268594345|ref|ZP_06128512.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
gi|268596341|ref|ZP_06130508.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
gi|268547734|gb|EEZ43152.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae 35/02]
gi|268550129|gb|EEZ45148.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae FA19]
Length = 86
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 24 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 71
>gi|50955433|ref|YP_062721.1| 50S ribosomal protein L35 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|81692587|sp|Q6ADC8.1|RL35_LEIXX RecName: Full=50S ribosomal protein L35
gi|50951915|gb|AAT89616.1| 50S ribosomal protein L35 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 64
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G+V + G RHN +K KRRL +VP AK ++++
Sbjct: 3 KQKTHSGAKKRFKITGSGKVMKQQAGMRHNLEVKGSDRKRRLNADQVVPEVDAKFVRRM 61
>gi|194098022|ref|YP_002001070.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae NCCP11945]
gi|297250594|ref|ZP_06864618.2| conserved domain protein [Neisseria polysaccharea ATCC 43768]
gi|416205929|ref|ZP_11620661.1| ribosomal protein L35 [Neisseria meningitidis 961-5945]
gi|193933312|gb|ACF29136.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
NCCP11945]
gi|296838506|gb|EFH22444.1| conserved domain protein [Neisseria polysaccharea ATCC 43768]
gi|325141984|gb|EGC64421.1| ribosomal protein L35 [Neisseria meningitidis 961-5945]
Length = 92
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 30 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 77
>gi|304387976|ref|ZP_07370148.1| 50S ribosomal protein L35 [Neisseria meningitidis ATCC 13091]
gi|385854868|ref|YP_005901381.1| 50S ribosomal protein L35 [Neisseria meningitidis M01-240355]
gi|416163133|ref|ZP_11606923.1| ribosomal protein L35 [Neisseria meningitidis N1568]
gi|418287934|ref|ZP_12900464.1| ribosomal protein L35 [Neisseria meningitidis NM233]
gi|418290197|ref|ZP_12902371.1| ribosomal protein L35 [Neisseria meningitidis NM220]
gi|304337975|gb|EFM04113.1| 50S ribosomal protein L35 [Neisseria meningitidis ATCC 13091]
gi|325127772|gb|EGC50680.1| ribosomal protein L35 [Neisseria meningitidis N1568]
gi|325203809|gb|ADY99262.1| ribosomal protein L35 [Neisseria meningitidis M01-240355]
gi|372202042|gb|EHP15905.1| ribosomal protein L35 [Neisseria meningitidis NM220]
gi|372202870|gb|EHP16630.1| ribosomal protein L35 [Neisseria meningitidis NM233]
Length = 97
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 35 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 82
>gi|161869664|ref|YP_001598831.1| 50S ribosomal protein L35 [Neisseria meningitidis 053442]
gi|291044369|ref|ZP_06570078.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
gi|293399555|ref|ZP_06643708.1| large subunit ribosomal protein L35 [Neisseria gonorrhoeae F62]
gi|385335221|ref|YP_005889168.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|385339697|ref|YP_005893569.1| 50S ribosomal protein L35 [Neisseria meningitidis G2136]
gi|385342276|ref|YP_005896147.1| 50S ribosomal protein L35 [Neisseria meningitidis M01-240149]
gi|385853590|ref|YP_005900104.1| 50S ribosomal protein L35 [Neisseria meningitidis H44/76]
gi|416172930|ref|ZP_11608838.1| ribosomal protein L35 [Neisseria meningitidis OX99.30304]
gi|416178772|ref|ZP_11610729.1| ribosomal protein L35 [Neisseria meningitidis M6190]
gi|416183882|ref|ZP_11612788.1| ribosomal protein L35 [Neisseria meningitidis M13399]
gi|416188272|ref|ZP_11614741.1| ribosomal protein L35 [Neisseria meningitidis M0579]
gi|416192708|ref|ZP_11616814.1| ribosomal protein L35 [Neisseria meningitidis ES14902]
gi|416197451|ref|ZP_11618661.1| ribosomal protein L35 [Neisseria meningitidis CU385]
gi|416214018|ref|ZP_11622681.1| ribosomal protein L35 [Neisseria meningitidis M01-240013]
gi|421906520|ref|ZP_16336413.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha704]
gi|427828434|ref|ZP_18995450.1| ribosomal protein L35 [Neisseria meningitidis H44/76]
gi|161595217|gb|ABX72877.1| 50S ribosomal protein L35 [Neisseria meningitidis 053442]
gi|291011263|gb|EFE03259.1| 50S ribosomal protein L35 [Neisseria gonorrhoeae DGI2]
gi|291610124|gb|EFF39246.1| large subunit ribosomal protein L35 [Neisseria gonorrhoeae F62]
gi|316983703|gb|EFV62684.1| ribosomal protein L35 [Neisseria meningitidis H44/76]
gi|317163764|gb|ADV07305.1| putative 50S ribosomal protein L35 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|325129873|gb|EGC52677.1| ribosomal protein L35 [Neisseria meningitidis OX99.30304]
gi|325131825|gb|EGC54525.1| ribosomal protein L35 [Neisseria meningitidis M6190]
gi|325133764|gb|EGC56420.1| ribosomal protein L35 [Neisseria meningitidis M13399]
gi|325136055|gb|EGC58665.1| ribosomal protein L35 [Neisseria meningitidis M0579]
gi|325137875|gb|EGC60450.1| ribosomal protein L35 [Neisseria meningitidis ES14902]
gi|325140123|gb|EGC62652.1| ribosomal protein L35 [Neisseria meningitidis CU385]
gi|325144075|gb|EGC66383.1| ribosomal protein L35 [Neisseria meningitidis M01-240013]
gi|325197941|gb|ADY93397.1| ribosomal protein L35 [Neisseria meningitidis G2136]
gi|325200594|gb|ADY96049.1| ribosomal protein L35 [Neisseria meningitidis H44/76]
gi|325202482|gb|ADY97936.1| ribosomal protein L35 [Neisseria meningitidis M01-240149]
gi|393292268|emb|CCI72353.1| 50S ribosomal protein L35 [Neisseria meningitidis alpha704]
Length = 97
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 35 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 82
>gi|325266386|ref|ZP_08133064.1| 50S ribosomal protein L35 [Kingella denitrificans ATCC 33394]
gi|404378131|ref|ZP_10983230.1| 50S ribosomal protein L35 [Simonsiella muelleri ATCC 29453]
gi|294483997|gb|EFG31680.1| 50S ribosomal protein L35 [Simonsiella muelleri ATCC 29453]
gi|324982179|gb|EGC17813.1| 50S ribosomal protein L35 [Kingella denitrificans ATCC 33394]
Length = 65
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 3 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 50
>gi|349573838|ref|ZP_08885809.1| 50S ribosomal protein L35 [Neisseria shayeganii 871]
gi|348014626|gb|EGY53499.1| 50S ribosomal protein L35 [Neisseria shayeganii 871]
Length = 76
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 14 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 61
>gi|429742791|ref|ZP_19276402.1| ribosomal protein L35 [Neisseria sp. oral taxon 020 str. F0370]
gi|429167653|gb|EKY09552.1| ribosomal protein L35 [Neisseria sp. oral taxon 020 str. F0370]
Length = 76
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 14 KMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 61
>gi|170781628|ref|YP_001709960.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
sepedonicus]
gi|189042760|sp|B0RHC1.1|RL35_CLAMS RecName: Full=50S ribosomal protein L35
gi|169156196|emb|CAQ01338.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 64
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G++ + G RHN +KS K K RL Q + A KV KKL
Sbjct: 3 KQKTHSGAKKRFKVTGSGKIMKQQAGMRHNLEVKSSKRKARLNQDQPLAKADMKVAKKL 61
>gi|253577272|ref|ZP_04854591.1| 50S ribosomal protein L35 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843386|gb|EES71415.1| 50S ribosomal protein L35 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 66
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++SS K RF+ G+VRR+ K + HL S KSKR R A P+AYA ++++
Sbjct: 3 KMKTHSSLKGRFKITGSGKVRRY---KANRNHLLSHKSKRAKRVLANSPVAYAGDVRRM 58
>gi|345875523|ref|ZP_08827315.1| hypothetical protein l11_13990 [Neisseria weaveri LMG 5135]
gi|417958414|ref|ZP_12601329.1| hypothetical protein l13_17410 [Neisseria weaveri ATCC 51223]
gi|343967072|gb|EGV35323.1| hypothetical protein l13_17410 [Neisseria weaveri ATCC 51223]
gi|343968816|gb|EGV37038.1| hypothetical protein l11_13990 [Neisseria weaveri LMG 5135]
Length = 65
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ S K RF+ + +G V+R H KRH K+ K+KR+LR ++V
Sbjct: 3 KMKTKSGAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQLRGTSMV 50
>gi|262196930|ref|YP_003268139.1| 50S ribosomal protein L35 [Haliangium ochraceum DSM 14365]
gi|262080277|gb|ACY16246.1| ribosomal protein L35 [Haliangium ochraceum DSM 14365]
Length = 66
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLA 196
KMKS S K RFR G+ RR +G+RH KS K KR+LR+ ALV A
Sbjct: 3 KMKSKSGAKKRFRATASGKFRRGTKGRRHLLTHKSPKRKRQLRKSALVDKA 53
>gi|253682638|ref|ZP_04863435.1| ribosomal protein L35 [Clostridium botulinum D str. 1873]
gi|331269138|ref|YP_004395630.1| 50S ribosomal protein L35 [Clostridium botulinum BKT015925]
gi|416353046|ref|ZP_11681447.1| 50S ribosomal protein L35 [Clostridium botulinum C str. Stockholm]
gi|253562350|gb|EES91802.1| ribosomal protein L35 [Clostridium botulinum D str. 1873]
gi|329125688|gb|AEB75633.1| ribosomal protein L35 [Clostridium botulinum BKT015925]
gi|338195644|gb|EGO87899.1| 50S ribosomal protein L35 [Clostridium botulinum C str. Stockholm]
Length = 65
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++ RF+ G+++R K H KS K+KR LR+ LV A KVMKKL
Sbjct: 3 KMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEAQEKVMKKL 61
>gi|118443181|ref|YP_877835.1| 50S ribosomal protein L35 [Clostridium novyi NT]
gi|166231179|sp|A0PZN3.1|RL35_CLONN RecName: Full=50S ribosomal protein L35
gi|118133637|gb|ABK60681.1| ribosomal protein L35 [Clostridium novyi NT]
Length = 65
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++ RF+ G+++R K H KS K+KR LR+ LV A KVMKKL
Sbjct: 3 KMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEAQEKVMKKL 61
>gi|323356732|ref|YP_004223128.1| ribosomal protein L35 [Microbacterium testaceum StLB037]
gi|323273103|dbj|BAJ73248.1| ribosomal protein L35 [Microbacterium testaceum StLB037]
Length = 64
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G++ + G RHN K+ K RRL Q ++ +KV KKL
Sbjct: 3 KQKTHSGAKKRFKLTGSGKLMKQQAGMRHNLEGKASKRTRRLNQEQVLAKGDSKVAKKL 61
>gi|153955809|ref|YP_001396574.1| 50S ribosomal protein L35 [Clostridium kluyveri DSM 555]
gi|219856176|ref|YP_002473298.1| hypothetical protein CKR_2833 [Clostridium kluyveri NBRC 12016]
gi|189042762|sp|A5N257.1|RL35_CLOK5 RecName: Full=50S ribosomal protein L35
gi|254802444|sp|B9E5V9.1|RL35_CLOK1 RecName: Full=50S ribosomal protein L35
gi|146348667|gb|EDK35203.1| RpmI [Clostridium kluyveri DSM 555]
gi|219569900|dbj|BAH07884.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 65
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ S RF+ G+++R K H KS+K+KR LR+ A V KVMKKL
Sbjct: 3 KMKTKKSVAKRFKLTGTGKLKRAQAFKSHILTKKSRKTKRNLRKTAYVSETQEKVMKKL 61
>gi|20808118|ref|NP_623289.1| 50S ribosomal protein L35 [Thermoanaerobacter tengcongensis MB4]
gi|22096085|sp|Q8R9C3.1|RL35_THETN RecName: Full=50S ribosomal protein L35
gi|20516705|gb|AAM24893.1| Ribosomal protein L35 [Thermoanaerobacter tengcongensis MB4]
Length = 67
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
KIKMK++ RF+ + G+V+R K H KS K KRRLR+ + A AK +K+
Sbjct: 3 KIKMKTHRGAAKRFKVLKSGKVKRMKAYKSHLLTHKSSKRKRRLRKATYLEGASAKTIKR 62
Query: 204 L 204
L
Sbjct: 63 L 63
>gi|452910879|ref|ZP_21959556.1| LSU ribosomal protein L35p [Kocuria palustris PEL]
gi|452834051|gb|EME36855.1| LSU ribosomal protein L35p [Kocuria palustris PEL]
Length = 64
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++S K RF+ G+V+R +RH KS + RRL +V AKV+KK+
Sbjct: 3 KMKTHSGAKKRFKITGSGKVKRQQANRRHYLEHKSSRLTRRLAGDKIVAPGDAKVVKKM 61
>gi|225375383|ref|ZP_03752604.1| hypothetical protein ROSEINA2194_01008 [Roseburia inulinivorans DSM
16841]
gi|225212872|gb|EEG95226.1| hypothetical protein ROSEINA2194_01008 [Roseburia inulinivorans DSM
16841]
Length = 65
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ + RF+ G+++R KRH K+ K+KR LR+PA+V K MKK+
Sbjct: 3 KMKTSRAAAKRFKVTGTGKLKRSKAYKRHILTKKTTKNKRNLRKPAMVDATNVKNMKKI 61
>gi|350567516|ref|ZP_08935926.1| 50S ribosomal protein L35 [Propionibacterium avidum ATCC 25577]
gi|348662587|gb|EGY79244.1| 50S ribosomal protein L35 [Propionibacterium avidum ATCC 25577]
Length = 72
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMKS+S K RF+ G+V GKRH KS + RRL ++P A +KKL
Sbjct: 7 KMKSHSGTKKRFKVTGSGKVTARKAGKRHLNEHKSSRVTRRLTGETVLPKGEAAKVKKL 65
>gi|320169295|gb|EFW46194.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRH-NAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+KS S+ K RFR M +G+ +R GK+H N H KS+K K RL + L + K ++++
Sbjct: 142 KLKSRSAVKRRFRLMANGRYKRRQAGKQHLNIH-KSRKRKNRLAKTVLTTNTHTKTIRRI 200
>gi|148273191|ref|YP_001222752.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166231175|sp|A5CSK2.1|RL35_CLAM3 RecName: Full=50S ribosomal protein L35
gi|147831121|emb|CAN02073.1| 50S ribosomal protein L35 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 64
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G++ + G RHN +KS K RL Q + A KV KKL
Sbjct: 3 KQKTHSGAKKRFKVTGTGKIMKQQAGMRHNLEVKSSGRKARLNQDQPLAKADMKVAKKL 61
>gi|240146872|ref|ZP_04745473.1| ribosomal protein L35 [Roseburia intestinalis L1-82]
gi|257200970|gb|EEU99254.1| ribosomal protein L35 [Roseburia intestinalis L1-82]
gi|291536061|emb|CBL09173.1| LSU ribosomal protein L35P [Roseburia intestinalis M50/1]
gi|291538554|emb|CBL11665.1| LSU ribosomal protein L35P [Roseburia intestinalis XB6B4]
Length = 65
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ + RF+ G+++R KRH K+ K+KR LR+PA+V K MKK+
Sbjct: 3 KMKTSRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKNKRNLRKPAIVDATNVKNMKKI 61
>gi|91776353|ref|YP_546109.1| 50S ribosomal protein L35P [Methylobacillus flagellatus KT]
gi|124078995|sp|Q1GZR9.1|RL35_METFK RecName: Full=50S ribosomal protein L35
gi|91710340|gb|ABE50268.1| LSU ribosomal protein L35P [Methylobacillus flagellatus KT]
Length = 65
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G+V+R H RH K+ K KR LR A++
Sbjct: 3 KMKTKSSAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRNLRGTAII 50
>gi|167537191|ref|XP_001750265.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771255|gb|EDQ84924.1| predicted protein [Monosiga brevicollis MX1]
Length = 165
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 82 NYPSSSSSHITRCC------SYPSPSLAAAPS-------LCSFRLPLSFI---QVRHVSS 125
N P + R C P PSL A S L ++P+S Q R + +
Sbjct: 27 NAPRLACDAAHRACWTLARVGLPQPSLLQARSSLVRPAPLLQGQMPVSGFLQQQQRGLKT 86
Query: 126 RDRKKRRKPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKR 185
R+ +R+ P K KMK + +RF+ + + +V+ W G+ HN+ K+KK R
Sbjct: 87 LKRQIKRRYRDP-----PKYKMKRKKAMAARFKIVGNDKVKYWRAGRVHNSSGKTKKRLR 141
Query: 186 RLRQPA 191
LR+P
Sbjct: 142 LLRRPG 147
>gi|46446337|ref|YP_007702.1| 50S ribosomal protein L35 [Candidatus Protochlamydia amoebophila
UWE25]
gi|54036262|sp|Q6MDC2.1|RL35_PARUW RecName: Full=50S ribosomal protein L35
gi|46399978|emb|CAF23427.1| probable 50S ribosomal protein L35 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 64
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ + S+FR G+++ G+RH K+ K KR+LR+P LV + K K+L
Sbjct: 3 KMKTRKAVASKFRVTATGKLKASRPGRRHKLTGKTPKRKRQLRRPGLVDDGHLKTYKRL 61
>gi|291544307|emb|CBL17416.1| LSU ribosomal protein L35P [Ruminococcus champanellensis 18P13]
Length = 67
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
K+K+K++S K RF+ G+V+ H KRH K K KR R + A +KK
Sbjct: 3 KVKVKTHSGAKKRFKVTGSGKVKYQHTNKRHRLTQKDTKRKRIARGAGICDCTNAPTIKK 62
Query: 204 L 204
L
Sbjct: 63 L 63
>gi|237669094|ref|ZP_04529078.1| ribosomal protein L35 [Clostridium butyricum E4 str. BoNT E BL5262]
gi|237657442|gb|EEP54998.1| ribosomal protein L35 [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 65
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMKS+ RFR G+++R K H KS K+KR LR+ V A KVMKKL
Sbjct: 3 KMKSHRGAAKRFRKTGTGKLKRAKAFKSHILTKKSSKTKRNLRKAGYVCKAQEKVMKKL 61
>gi|300856608|ref|YP_003781592.1| 50S ribosomal protein L35 [Clostridium ljungdahlii DSM 13528]
gi|300436723|gb|ADK16490.1| 50S ribosomal protein L35 [Clostridium ljungdahlii DSM 13528]
Length = 65
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ S RF+ G+++R K H KS K+KR LR+ LV K+MKKL
Sbjct: 3 KMKTKRSVAKRFKITGTGKLKRSKAFKSHILTKKSAKTKRNLRKAGLVSETQEKIMKKL 61
>gi|268608874|ref|ZP_06142601.1| 50S ribosomal protein L35P [Ruminococcus flavefaciens FD-1]
Length = 67
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
K+K+K++S K RF+ G+V+ H KRH K K KR R + A +KK
Sbjct: 3 KVKVKTHSGAKKRFKITGTGKVKYQHTNKRHRLTQKDTKRKRIARNAGVADCTNAPTIKK 62
Query: 204 L 204
L
Sbjct: 63 L 63
>gi|227497642|ref|ZP_03927860.1| ribosomal protein L35 [Actinomyces urogenitalis DSM 15434]
gi|226832913|gb|EEH65296.1| ribosomal protein L35 [Actinomyces urogenitalis DSM 15434]
Length = 64
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RFR G++ R GKRH +KS + KR+L + +V + + +KKL
Sbjct: 3 KNKTHSGAKKRFRVTGSGKLMREQAGKRHLLEVKSSRRKRKLSKDQVVDASNLREVKKL 61
>gi|125973739|ref|YP_001037649.1| 50S ribosomal protein L35P [Clostridium thermocellum ATCC 27405]
gi|256005541|ref|ZP_05430502.1| ribosomal protein L35 [Clostridium thermocellum DSM 2360]
gi|281417895|ref|ZP_06248915.1| ribosomal protein L35 [Clostridium thermocellum JW20]
gi|385778387|ref|YP_005687552.1| 50S ribosomal protein L35 [Clostridium thermocellum DSM 1313]
gi|419721305|ref|ZP_14248470.1| 50S ribosomal protein L35 [Clostridium thermocellum AD2]
gi|419724383|ref|ZP_14251449.1| 50S ribosomal protein L35 [Clostridium thermocellum YS]
gi|166231180|sp|A3DES7.1|RL35_CLOTH RecName: Full=50S ribosomal protein L35
gi|125713964|gb|ABN52456.1| ribosomal protein L35 [Clostridium thermocellum ATCC 27405]
gi|255990521|gb|EEU00642.1| ribosomal protein L35 [Clostridium thermocellum DSM 2360]
gi|281409297|gb|EFB39555.1| ribosomal protein L35 [Clostridium thermocellum JW20]
gi|316940067|gb|ADU74101.1| ribosomal protein L35 [Clostridium thermocellum DSM 1313]
gi|380772205|gb|EIC06059.1| 50S ribosomal protein L35 [Clostridium thermocellum YS]
gi|380782685|gb|EIC12318.1| 50S ribosomal protein L35 [Clostridium thermocellum AD2]
Length = 65
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+K++SS K RF+ G+V+R K H K+ K KR LR+ + A A V+KKL
Sbjct: 3 KIKTHSSSKKRFKLTGTGKVKRAKAYKSHILTKKTSKRKRNLRKSTIASSANASVIKKL 61
>gi|420153128|ref|ZP_14660124.1| ribosomal protein L35 [Actinomyces massiliensis F0489]
gi|394762056|gb|EJF44367.1| ribosomal protein L35 [Actinomyces massiliensis F0489]
Length = 64
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RFR G++ R KRH +KS + KRRL Q V A + +KKL
Sbjct: 3 KNKTHSGAKKRFRVTGSGKLMREQTNKRHLLEVKSSRRKRRLAQDQSVAKADVRQVKKL 61
>gi|392374911|ref|YP_003206744.1| 50S ribosomal protein L35 [Candidatus Methylomirabilis oxyfera]
gi|258592604|emb|CBE68913.1| 50S ribosomal protein L35 [Candidatus Methylomirabilis oxyfera]
Length = 67
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+K+ RF+ G++RR K H KS+K KR LRQP LV A M++L
Sbjct: 5 KIKTLKGAAKRFKMTGTGKIRRNKASKSHLLTGKSRKRKRNLRQPGLVSKADTARMERL 63
>gi|253998431|ref|YP_003050494.1| 50S ribosomal protein L35 [Methylovorus glucosetrophus SIP3-4]
gi|313200506|ref|YP_004039164.1| 50S ribosomal protein L35 [Methylovorus sp. MP688]
gi|253985110|gb|ACT49967.1| ribosomal protein L35 [Methylovorus glucosetrophus SIP3-4]
gi|312439822|gb|ADQ83928.1| ribosomal protein L35 [Methylovorus sp. MP688]
Length = 65
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ S K RF+ + +G+V+R H RH K+ K KR LR A++
Sbjct: 3 KMKTKSGAKKRFKFLGNGKVKRTHSHLRHILTKKTTKQKRNLRGTAII 50
>gi|283458460|ref|YP_003363086.1| 50S ribosomal protein L35 [Rothia mucilaginosa DY-18]
gi|311113267|ref|YP_003984489.1| 50S ribosomal protein L35 [Rothia dentocariosa ATCC 17931]
gi|283134501|dbj|BAI65266.1| ribosomal protein L35 [Rothia mucilaginosa DY-18]
gi|310944761|gb|ADP41055.1| 50S ribosomal protein L35 [Rothia dentocariosa ATCC 17931]
Length = 72
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G+V+R +RH KS + RRL +V AKV+KK+
Sbjct: 11 KQKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLASDQIVTGGQAKVVKKM 69
>gi|152967112|ref|YP_001362896.1| 50S ribosomal protein L35 [Kineococcus radiotolerans SRS30216]
gi|189042773|sp|A6WCU3.1|RL35_KINRD RecName: Full=50S ribosomal protein L35
gi|151361629|gb|ABS04632.1| ribosomal protein L35 [Kineococcus radiotolerans SRS30216]
Length = 64
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RFR G+V R KRH +KS K RRL +V A K +KKL
Sbjct: 3 KNKTHSGAKKRFRITGSGKVMREQANKRHLLEVKSSKRTRRLSVDQVVSPADVKKIKKL 61
>gi|397904500|ref|ZP_10505410.1| LSU ribosomal protein L35p [Caloramator australicus RC3]
gi|397162455|emb|CCJ32744.1| LSU ribosomal protein L35p [Caloramator australicus RC3]
Length = 65
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++ RF+ G+ +R H RH K K KRRLR+ LV +A K +KKL
Sbjct: 3 KMKTHKGAAKRFKKTASGKFKRSHAYHRHILTKKDAKRKRRLRKATLVHVAEVKKLKKL 61
>gi|163782695|ref|ZP_02177691.1| ribosomal protein L35 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881816|gb|EDP75324.1| ribosomal protein L35 [Hydrogenivirga sp. 128-5-R1-1]
Length = 66
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
K+KMK+ S K RF+ G+++RW G H K K KRRLR+ V
Sbjct: 3 KVKMKTNRSAKKRFKVTATGKIKRWKGGGSHYNTKKDPKRKRRLRKATYV 52
>gi|119962218|ref|YP_947379.1| 50S ribosomal protein L35 [Arthrobacter aurescens TC1]
gi|166231152|sp|A1R567.1|RL35_ARTAT RecName: Full=50S ribosomal protein L35
gi|119949077|gb|ABM07988.1| ribosomal protein L35 [Arthrobacter aurescens TC1]
Length = 64
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++S K RF+ G+++R +RH KS + RRL LV AKV+KK+
Sbjct: 3 KMKTHSGAKKRFKLTGTGKLKRQQANRRHYLEHKSSRLTRRLAGDKLVFKGDAKVIKKM 61
>gi|451819434|ref|YP_007455635.1| 50S ribosomal protein L35 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785413|gb|AGF56381.1| 50S ribosomal protein L35 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 65
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMKS+ RFR G+++R K H KS K+KR LR+ V + KVMKKL
Sbjct: 3 KMKSHRGAAKRFRKTGTGKLKRAKAFKSHILTKKSSKTKRNLRKAGYVSKSQEKVMKKL 61
>gi|58337802|ref|YP_194387.1| 50S ribosomal protein L35 [Lactobacillus acidophilus NCFM]
gi|227904451|ref|ZP_04022256.1| 50S ribosomal protein L35 [Lactobacillus acidophilus ATCC 4796]
gi|75507559|sp|Q5FIW8.1|RL35_LACAC RecName: Full=50S ribosomal protein L35
gi|58255119|gb|AAV43356.1| 50s ribosomal RL35 [Lactobacillus acidophilus NCFM]
gi|227867826|gb|EEJ75247.1| 50S ribosomal protein L35 [Lactobacillus acidophilus ATCC 4796]
Length = 66
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++ + RF+ +G ++R H H H K+KK +R LR+PA+V + K +K++
Sbjct: 3 KMKTHRASAKRFKRTANGGLKRHHAFTGHRFHGKTKKQRRHLRKPAMVSRSDMKRIKQM 61
>gi|255326344|ref|ZP_05367428.1| ribosomal protein L35 [Rothia mucilaginosa ATCC 25296]
gi|300744015|ref|ZP_07073035.1| ribosomal protein L35 [Rothia dentocariosa M567]
gi|383809943|ref|ZP_09965455.1| ribosomal protein L35 [Rothia aeria F0474]
gi|422325402|ref|ZP_16406438.1| 50S ribosomal protein L35 [Rothia mucilaginosa M508]
gi|255296561|gb|EET75894.1| ribosomal protein L35 [Rothia mucilaginosa ATCC 25296]
gi|300380376|gb|EFJ76939.1| ribosomal protein L35 [Rothia dentocariosa M567]
gi|353343406|gb|EHB87724.1| 50S ribosomal protein L35 [Rothia mucilaginosa M508]
gi|383447263|gb|EID50248.1| ribosomal protein L35 [Rothia aeria F0474]
Length = 64
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G+V+R +RH KS + RRL +V AKV+KK+
Sbjct: 3 KQKTHSGAKKRFKLTGSGKVKRQQANRRHYLEHKSSRLTRRLASDQIVTGGQAKVVKKM 61
>gi|269795536|ref|YP_003314991.1| 50S ribosomal protein L35P [Sanguibacter keddieii DSM 10542]
gi|269097721|gb|ACZ22157.1| LSU ribosomal protein L35P [Sanguibacter keddieii DSM 10542]
Length = 64
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RFR G+V R KRH KS + KRRL +V A K +KKL
Sbjct: 3 KNKTHSGAKKRFRITGSGKVMREQANKRHLLEHKSSRRKRRLSGDLVVSAADVKKIKKL 61
>gi|296133379|ref|YP_003640626.1| 50S ribosomal protein L35 [Thermincola potens JR]
gi|296031957|gb|ADG82725.1| ribosomal protein L35 [Thermincola potens JR]
Length = 65
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++ RF+ G+V++ K H KS K KR LRQP LV A K +K L
Sbjct: 3 KMKTHRGAAKRFKVTGSGKVKKAKAYKSHILEKKSAKRKRNLRQPGLVSAADTKKVKLL 61
>gi|335357144|ref|ZP_08549014.1| 50S ribosomal protein L35 [Lactobacillus animalis KCTC 3501]
Length = 66
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++ + RF+ +G ++R H H H K+KK +R+LR+PA+V + K +K++
Sbjct: 3 KQKTHRASAKRFKRTGNGGLKRAHAFTSHRFHGKTKKQRRQLRKPAMVSASDMKRIKQM 61
>gi|338733286|ref|YP_004671759.1| hypothetical protein SNE_A13910 [Simkania negevensis Z]
gi|336482669|emb|CCB89268.1| hypothetical protein SNE_A13910 [Simkania negevensis Z]
Length = 65
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 156 RFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
RF+ G++ R +G+RH K+ K KR L++PA V A+AK+ K+L
Sbjct: 13 RFKVTGTGKLMRCQQGRRHILTKKTSKRKRHLKKPAKVYEAFAKLYKRL 61
>gi|269215920|ref|ZP_06159774.1| ribosomal protein L35 [Slackia exigua ATCC 700122]
gi|269130179|gb|EEZ61257.1| ribosomal protein L35 [Slackia exigua ATCC 700122]
Length = 71
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRL---RQPALVPLAYAKVMK 202
KMK++S K RFR G++ R GK + +H+K+KKS +R+ R LV A KV++
Sbjct: 10 KMKTHSGSKKRFRVTGTGKIVR---GKAYKSHIKTKKSPKRIRGFRHDGLVSSADKKVVR 66
>gi|389843169|ref|YP_006345249.1| 50S ribosomal protein L35 [Mesotoga prima MesG1.Ag.4.2]
gi|387857915|gb|AFK06006.1| ribosomal protein L35 [Mesotoga prima MesG1.Ag.4.2]
Length = 67
Score = 37.4 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 144 KIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
K+KMK++ + R++ G++ R G HN KS+ S+R R+ LV Y K +KK
Sbjct: 4 KVKMKTHKASAKRYKVTGSGKIMRNQSGTGHNTGKKSESSRREARKWKLVEGGYEKKVKK 63
>gi|402828944|ref|ZP_10877826.1| ribosomal protein L35 [Slackia sp. CM382]
gi|402285266|gb|EJU33755.1| ribosomal protein L35 [Slackia sp. CM382]
Length = 64
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRL---RQPALVPLAYAKVMK 202
KMK++S K RFR G++ R GK + +H+K+KKS +R+ R LV A KV++
Sbjct: 3 KMKTHSGSKKRFRVTGTGKIVR---GKAYKSHIKTKKSPKRIRGFRHDGLVSSADKKVVR 59
>gi|116670039|ref|YP_830972.1| 50S ribosomal protein L35 [Arthrobacter sp. FB24]
gi|220912250|ref|YP_002487559.1| 50S ribosomal protein L35 [Arthrobacter chlorophenolicus A6]
gi|325962864|ref|YP_004240770.1| 50S ribosomal protein L35 [Arthrobacter phenanthrenivorans Sphe3]
gi|444306944|ref|ZP_21142696.1| 50S ribosomal protein L35 [Arthrobacter sp. SJCon]
gi|166231153|sp|A0JV02.1|RL35_ARTS2 RecName: Full=50S ribosomal protein L35
gi|254802428|sp|B8HGA8.1|RL35_ARTCA RecName: Full=50S ribosomal protein L35
gi|116610148|gb|ABK02872.1| LSU ribosomal protein L35P [Arthrobacter sp. FB24]
gi|219859128|gb|ACL39470.1| ribosomal protein L35 [Arthrobacter chlorophenolicus A6]
gi|323468951|gb|ADX72636.1| LSU ribosomal protein L35P [Arthrobacter phenanthrenivorans Sphe3]
gi|443480721|gb|ELT43664.1| 50S ribosomal protein L35 [Arthrobacter sp. SJCon]
Length = 64
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++S K RF+ G++RR +RH KS + RRL +V AKV++K+
Sbjct: 3 KMKTHSGAKKRFKLTGSGKLRRQQANRRHYLEHKSSRLTRRLAGDKIVFKGDAKVIRKM 61
>gi|359775353|ref|ZP_09278691.1| 50S ribosomal protein L35 [Arthrobacter globiformis NBRC 12137]
gi|359307316|dbj|GAB12520.1| 50S ribosomal protein L35 [Arthrobacter globiformis NBRC 12137]
Length = 64
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++S K RF+ G++RR +RH KS + RRL +V AKV++K+
Sbjct: 3 KMKTHSGAKKRFKLTGTGKLRRQQANRRHYLEHKSSRLTRRLAGDKIVFKGDAKVIRKM 61
>gi|317129889|ref|YP_004096171.1| 50S ribosomal protein L35 [Bacillus cellulosilyticus DSM 2522]
gi|315474837|gb|ADU31440.1| ribosomal protein L35 [Bacillus cellulosilyticus DSM 2522]
Length = 62
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK++S RF+ G+++R H H A KS+K KR+LR+ ALV
Sbjct: 3 KMKTHSGASKRFKKTGTGKLKRAHGYTSHLAANKSQKQKRKLRKGALV 50
>gi|347531902|ref|YP_004838665.1| 50S ribosomal protein L35 [Roseburia hominis A2-183]
gi|345502050|gb|AEN96733.1| 50S ribosomal protein L35 [Roseburia hominis A2-183]
Length = 65
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ + RF+ G+++R KRH K+ K+KR LR+PA+ K MKK+
Sbjct: 3 KMKTSRAAAKRFKVTGTGKLKRNKAYKRHILTKKTTKNKRNLRKPAMTDATNVKNMKKI 61
>gi|258404183|ref|YP_003196925.1| 50S ribosomal protein L35 [Desulfohalobium retbaense DSM 5692]
gi|257796410|gb|ACV67347.1| ribosomal protein L35 [Desulfohalobium retbaense DSM 5692]
Length = 65
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ RFRT G++RR +RH KS K KR+LR +V A K +K+L
Sbjct: 3 KMKTNKGAAKRFRTTGTGKIRRNRAFRRHILTKKSPKRKRQLRTGPVVDSANTKAVKRL 61
>gi|290999971|ref|XP_002682553.1| predicted protein [Naegleria gruberi]
gi|284096180|gb|EFC49809.1| predicted protein [Naegleria gruberi]
Length = 111
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 133 KPVTPVTSKVKKIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPAL 192
K VT V S +K+ +S K RFR G+++R GKRH+A K++K RL + L
Sbjct: 40 KLVTGVKS------LKTKTSAKKRFRITGSGKIKRKQAGKRHHAWSKNRKRLNRLGKTVL 93
Query: 193 V 193
V
Sbjct: 94 V 94
>gi|295395437|ref|ZP_06805636.1| 50S ribosomal protein L35 [Brevibacterium mcbrellneri ATCC 49030]
gi|294971759|gb|EFG47635.1| 50S ribosomal protein L35 [Brevibacterium mcbrellneri ATCC 49030]
Length = 68
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQP-ALVPLAYAKVMKKL 204
KMK++S K R R G++ R G RH A KS K KR++ Q L P AK K L
Sbjct: 3 KMKTHSGTKKRVRVTGSGKIMREGVGNRHLAEHKSSKRKRQISQDQVLAPGDAAKAKKLL 62
Query: 205 N 205
Sbjct: 63 G 63
>gi|268316190|ref|YP_003289909.1| 50S ribosomal protein L35 [Rhodothermus marinus DSM 4252]
gi|345302490|ref|YP_004824392.1| 50S ribosomal protein L35 [Rhodothermus marinus SG0.5JP17-172]
gi|262333724|gb|ACY47521.1| ribosomal protein L35 [Rhodothermus marinus DSM 4252]
gi|345111723|gb|AEN72555.1| ribosomal protein L35 [Rhodothermus marinus SG0.5JP17-172]
Length = 68
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLN 205
K+K+ S K RF+ G+++R H KSKK KR LRQPALV + +++L
Sbjct: 3 KVKTNSGAKKRFKVTATGKIKRRRAFHSHLLTKKSKKRKRHLRQPALVDATDVRRVRRLL 62
Query: 206 FCG 208
G
Sbjct: 63 HIG 65
>gi|312879876|ref|ZP_07739676.1| LSU ribosomal protein L35P [Aminomonas paucivorans DSM 12260]
gi|310783167|gb|EFQ23565.1| LSU ribosomal protein L35P [Aminomonas paucivorans DSM 12260]
Length = 65
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+K++S K RF G+V G+RH K+ K +RRLRQ ++ A +K++
Sbjct: 3 KVKTHSGAKKRFSVTGSGKVVYQKNGRRHLLQCKNAKRRRRLRQQGVLTPVLADTLKQM 61
>gi|365841932|ref|ZP_09382977.1| ribosomal protein L35 [Flavonifractor plautii ATCC 29863]
gi|373116562|ref|ZP_09530715.1| ribosomal protein L35 [Lachnospiraceae bacterium 7_1_58FAA]
gi|364576642|gb|EHM53956.1| ribosomal protein L35 [Flavonifractor plautii ATCC 29863]
gi|371669440|gb|EHO34542.1| ribosomal protein L35 [Lachnospiraceae bacterium 7_1_58FAA]
Length = 67
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRH--NAHLKSKKSKRRLRQPA 191
K+K++S K RF G+V+R H KRH N H K K KR LR A
Sbjct: 3 KLKTHSGAKKRFSLTKSGKVKRAHANKRHLLNGHDKDTKRKRGLRAGA 50
>gi|34496805|ref|NP_901020.1| 50S ribosomal protein L35 [Chromobacterium violaceum ATCC 12472]
gi|54036286|sp|Q7NYC4.1|RL35_CHRVO RecName: Full=50S ribosomal protein L35
gi|34102660|gb|AAQ59025.1| 50S ribosomal protein L35 [Chromobacterium violaceum ATCC 12472]
Length = 65
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K R + + G +R H KRH K+ K+KR+LR ++V
Sbjct: 3 KMKTKSSAKKRLKVLGGGGFKRAHAFKRHILTKKTTKNKRQLRGTSMV 50
>gi|410865589|ref|YP_006980200.1| rpmI multi-domain protein [Propionibacterium acidipropionici ATCC
4875]
gi|410822230|gb|AFV88845.1| rpmI multi-domain protein [Propionibacterium acidipropionici ATCC
4875]
Length = 68
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMKS+S K RF+ G++ GKRH KS + RRL A++ AK + KL
Sbjct: 3 KMKSHSGAKKRFKVTGSGKIVHARAGKRHLNEHKSSRRTRRLTGEAVLANGDAKKVSKL 61
>gi|365826262|ref|ZP_09368205.1| 50S ribosomal protein L35 [Actinomyces graevenitzii C83]
gi|365257059|gb|EHM87137.1| 50S ribosomal protein L35 [Actinomyces graevenitzii C83]
Length = 64
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RFR G++ R KRH +KS + KRRL + V A + KKL
Sbjct: 3 KNKTHSGAKKRFRVTGSGKLMREQTNKRHLLEVKSSRRKRRLSKDQTVAAADVRQAKKL 61
>gi|389876054|ref|YP_006369619.1| 50S ribosomal protein L35 [Tistrella mobilis KA081020-065]
gi|388526838|gb|AFK52035.1| 50S ribosomal protein L35 [Tistrella mobilis KA081020-065]
Length = 65
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+KS S K RFR G+VRR RH K++K KR R+ ++ A AK++K+
Sbjct: 3 KLKSKSGAKKRFRLTASGKVRRASAFHRHCMSSKTQKQKRNSRKTQILTAADAKIVKQF 61
>gi|168188010|ref|ZP_02622645.1| ribosomal protein L35 [Clostridium botulinum C str. Eklund]
gi|169294167|gb|EDS76300.1| ribosomal protein L35 [Clostridium botulinum C str. Eklund]
Length = 59
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMK 202
KMK++ RF+ G+++R K H KS K+KR LR+ LV A KVMK
Sbjct: 3 KMKTHRGAAKRFKKTGSGKLKRAKAFKSHILTKKSSKTKRNLRKSGLVSEAQEKVMK 59
>gi|344924939|ref|ZP_08778400.1| 50S ribosomal protein L35 [Candidatus Odyssella thessalonicensis
L13]
Length = 65
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLN 205
KMK+ SS K RF+ G+V+ GKRH +S K R R A++ ++AK ++
Sbjct: 3 KMKTKSSAKKRFKLTASGKVKMGQAGKRHGMRKRSNKFIRNARGTAIMSESFAKKVRTFY 62
Query: 206 F 206
F
Sbjct: 63 F 63
>gi|406908553|gb|EKD49025.1| hypothetical protein ACD_64C00029G0006 [uncultured bacterium]
Length = 63
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ S+ K RF+ + +G+++R +RH + KS K+KR+LR+ A +
Sbjct: 3 KMKTKSAAKKRFKLVGNGKIKRAKAYRRHLMNHKSTKTKRQLRKGAYI 50
>gi|327402298|ref|YP_004343136.1| 50S ribosomal protein L35P [Fluviicola taffensis DSM 16823]
gi|327317806|gb|AEA42298.1| LSU ribosomal protein L35P [Fluviicola taffensis DSM 16823]
Length = 65
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV---PLAYAKVM 201
KMK+ SS K RF G+++R H K H K+KK KR L LV L+ K+M
Sbjct: 3 KMKTTSSAKKRFTVTGSGKIKRKHAFKSHILTKKTKKQKRNLTHAGLVHQADLSNVKLM 61
>gi|452995736|emb|CCQ92607.1| ribosomal protein L35 [Clostridium ultunense Esp]
Length = 66
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 142 VKKIKMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KK+KMK++ R + G++RR+ K H KS K R LR+PALV
Sbjct: 2 AKKVKMKTHRGAAKRLKRTGTGKIRRYKAYKSHKTGKKSPKRIRNLRKPALV 53
>gi|317124676|ref|YP_004098788.1| 50S ribosomal protein L35 [Intrasporangium calvum DSM 43043]
gi|315588764|gb|ADU48061.1| LSU ribosomal protein L35P [Intrasporangium calvum DSM 43043]
Length = 64
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++S K RFR G+V R G RH KS K R + +V AK +KKL
Sbjct: 3 KMKTHSGAKKRFRITGTGKVMREQAGGRHLLEHKSSKKMRSIANDLVVAPEDAKKVKKL 61
>gi|420156783|ref|ZP_14663623.1| ribosomal protein L35 [Clostridium sp. MSTE9]
gi|394756793|gb|EJF39852.1| ribosomal protein L35 [Clostridium sp. MSTE9]
Length = 65
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+K++S K RF+ +G+V R H K H + KS K KR LRQ + + +KK+
Sbjct: 3 KIKTHSGAKKRFKISKNGKVIRGHAFKSHILNKKSTKRKRVLRQTTVTDVTNVAKVKKM 61
>gi|405980856|ref|ZP_11039185.1| ribosomal protein L35 [Actinomyces neuii BVS029A5]
gi|404392875|gb|EJZ87932.1| ribosomal protein L35 [Actinomyces neuii BVS029A5]
Length = 64
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK++S K RFR G++ H KRH +KS K KRRL + ++
Sbjct: 3 KMKTHSGAKKRFRVTGSGKLMHEHPNKRHLLEVKSSKRKRRLSKDTVM 50
>gi|189485295|ref|YP_001956236.1| 50S ribosomal protein L35 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287254|dbj|BAG13775.1| 50S ribosomal protein L35 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 63
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 147 MKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
MK +S K RF+ G+V+ G+RH S R+ R+PA+V + K MKK+
Sbjct: 1 MKQHSGAKKRFKVTGKGKVKYKKPGQRHLLTGDSGNQNRKARKPAIVTKSDMKTMKKI 58
>gi|406025647|ref|YP_006705948.1| 50S ribosomal protein L35 [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404433246|emb|CCM10528.1| 50S ribosomal protein L35 [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 66
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRH--NAHLKSKKSKRRLRQPALVPLAYAKVMKK 203
K+K++S K RF+ G+++R H K H +KS K KR+L LV A A ++K
Sbjct: 3 KVKTHSGSKKRFQVTGTGKIKRKHAFKNHCLAKKIKSTKQKRQLTHSTLVHAANAPTIRK 62
Query: 204 L 204
L
Sbjct: 63 L 63
>gi|315604406|ref|ZP_07879472.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|320093954|ref|ZP_08025783.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|396583566|ref|ZP_10484094.1| ribosomal protein L35 [Actinomyces sp. ICM47]
gi|399524056|ref|ZP_10764639.1| ribosomal protein L35 [Atopobium sp. ICM58]
gi|422012434|ref|ZP_16359124.1| ribosomal protein L35 [Actinomyces georgiae F0490]
gi|315314112|gb|EFU62163.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|319979112|gb|EFW10626.1| 50S ribosomal protein L35 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|394756491|gb|EJF39577.1| ribosomal protein L35 [Actinomyces georgiae F0490]
gi|395548912|gb|EJG16083.1| ribosomal protein L35 [Actinomyces sp. ICM47]
gi|398374831|gb|EJN52358.1| ribosomal protein L35 [Atopobium sp. ICM58]
Length = 64
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RFRT G++ R G RH KS + RRL ++ A K +K+L
Sbjct: 3 KNKTHSGAKKRFRTTGSGKIMREQAGARHLLEHKSSRKTRRLATDQVLETADVKRVKRL 61
>gi|374604777|ref|ZP_09677729.1| 50S ribosomal protein L35 [Paenibacillus dendritiformis C454]
gi|374389607|gb|EHQ60977.1| 50S ribosomal protein L35 [Paenibacillus dendritiformis C454]
Length = 66
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYA 198
KMK++SS K RF+ G+VRR+ K + HL S KS+R+ R A P+ A
Sbjct: 3 KMKTHSSLKGRFKITGTGKVRRY---KAYRNHLLSHKSQRQKRNLATSPVMAA 52
>gi|29840527|ref|NP_829633.1| 50S ribosomal protein L35 [Chlamydophila caviae GPIC]
gi|62185351|ref|YP_220136.1| 50S ribosomal protein L35 [Chlamydophila abortus S26/3]
gi|89898051|ref|YP_515161.1| 50S ribosomal protein L35 [Chlamydophila felis Fe/C-56]
gi|332287695|ref|YP_004422596.1| 50S ribosomal protein L35 [Chlamydophila psittaci 6BC]
gi|384450854|ref|YP_005663454.1| 50S ribosomal protein L35 [Chlamydophila psittaci 6BC]
gi|384451848|ref|YP_005664446.1| 50S ribosomal protein L35 [Chlamydophila psittaci 01DC11]
gi|384453801|ref|YP_005666397.1| 50S ribosomal protein L35 [Chlamydophila psittaci C19/98]
gi|384454780|ref|YP_005667375.1| 50S ribosomal protein L35 [Chlamydophila psittaci 02DC15]
gi|406592656|ref|YP_006739836.1| 50S ribosomal protein L35 [Chlamydia psittaci CP3]
gi|406593715|ref|YP_006740894.1| 50S ribosomal protein L35 [Chlamydia psittaci NJ1]
gi|407454327|ref|YP_006733435.1| 50S ribosomal protein L35 [Chlamydia psittaci 84/55]
gi|407458338|ref|YP_006736643.1| 50S ribosomal protein L35 [Chlamydia psittaci WS/RT/E30]
gi|410858709|ref|YP_006974649.1| 50S ribosomal protein L35 [Chlamydia psittaci 01DC12]
gi|33301613|sp|Q822B3.1|RL35_CHLCV RecName: Full=50S ribosomal protein L35
gi|81312498|sp|Q5L5A6.1|RL35_CHLAB RecName: Full=50S ribosomal protein L35
gi|148840414|sp|Q255M2.1|RL35_CHLFF RecName: Full=50S ribosomal protein L35
gi|29834876|gb|AAP05511.1| ribosomal protein L35 [Chlamydophila caviae GPIC]
gi|62148418|emb|CAH64185.1| 50S ribosomal protein L35 [Chlamydophila abortus S26/3]
gi|89331423|dbj|BAE81016.1| 50S ribosomal protein L35 [Chlamydophila felis Fe/C-56]
gi|325507122|gb|ADZ18760.1| 50S ribosomal protein L35 [Chlamydophila psittaci 6BC]
gi|328914948|gb|AEB55781.1| ribosomal protein L35 [Chlamydophila psittaci 6BC]
gi|334692582|gb|AEG85801.1| 50S ribosomal protein L35 [Chlamydophila psittaci C19/98]
gi|334693558|gb|AEG86776.1| 50S ribosomal protein L35 [Chlamydophila psittaci 01DC11]
gi|334694537|gb|AEG87754.1| 50S ribosomal protein L35 [Chlamydophila psittaci 02DC15]
gi|405781086|gb|AFS19836.1| ribosomal protein L35 [Chlamydia psittaci 84/55]
gi|405784702|gb|AFS23448.1| ribosomal protein L35 [Chlamydia psittaci WS/RT/E30]
gi|405788528|gb|AFS27271.1| ribosomal protein L35 [Chlamydia psittaci CP3]
gi|405789587|gb|AFS28329.1| ribosomal protein L35 [Chlamydia psittaci NJ1]
gi|410811604|emb|CCO02257.1| 50S ribosomal protein L35 [Chlamydia psittaci 01DC12]
Length = 64
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLN 205
KMKS S +RF+ GQ++R GKRH KS + KR L + LV + K++
Sbjct: 3 KMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKKSSQEKRNLSKQPLVDKGQVGMYKRMM 62
Query: 206 FC 207
Sbjct: 63 LV 64
>gi|392376926|ref|YP_004064704.1| 50S ribosomal protein L35 [Chlamydophila psittaci RD1]
gi|313848269|emb|CBY17270.1| 50S ribosomal protein L35 [Chlamydophila psittaci RD1]
Length = 64
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLN 205
KMKS S +RF+ GQ++R GKRH KS + KR L + LV + K++
Sbjct: 3 KMKSNKSVAARFKLTGSGQLKRTRPGKRHKLSKKSSQEKRNLSKQPLVDKGQVGMYKQMM 62
Query: 206 FC 207
Sbjct: 63 LV 64
>gi|385652537|ref|ZP_10047090.1| 50S ribosomal protein L35 [Leucobacter chromiiresistens JG 31]
Length = 64
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K K++S K RF+ G++ + G RHN +K+ K KRRL ++ AK KL
Sbjct: 3 KQKTHSGAKKRFKLTGSGKLMKQQAGMRHNLEVKASKRKRRLNAEQVLAKGDAKQAMKL 61
>gi|333381479|ref|ZP_08473161.1| 50S ribosomal protein L35 [Dysgonomonas gadei ATCC BAA-286]
gi|332830449|gb|EGK03077.1| 50S ribosomal protein L35 [Dysgonomonas gadei ATCC BAA-286]
Length = 65
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ S K RF G+++R H K H K+KK KR L +LV K +KKL
Sbjct: 3 KMKTNSGAKKRFALTGSGKIKRKHAFKSHILTKKTKKQKRNLTHSSLVHKVDEKAVKKL 61
>gi|375010939|ref|YP_004987927.1| 50S ribosomal protein L35 [Owenweeksia hongkongensis DSM 17368]
gi|359346863|gb|AEV31282.1| ribosomal protein L35 [Owenweeksia hongkongensis DSM 17368]
Length = 64
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVP 194
KMK+ +S K RF+ G+++R H K H K+ K KR L Q LV
Sbjct: 3 KMKTKASAKKRFKLTGSGKIKRKHAFKSHILTKKTTKQKRNLTQSGLVA 51
>gi|239917949|ref|YP_002957507.1| 50S ribosomal protein L35 [Micrococcus luteus NCTC 2665]
gi|289704522|ref|ZP_06500957.1| ribosomal protein L35 [Micrococcus luteus SK58]
gi|259647359|sp|C5CAP9.1|RL35_MICLC RecName: Full=50S ribosomal protein L35
gi|239839156|gb|ACS30953.1| LSU ribosomal protein L35P [Micrococcus luteus NCTC 2665]
gi|289558780|gb|EFD52036.1| ribosomal protein L35 [Micrococcus luteus SK58]
Length = 64
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++S K RFR G++ R +RH KS + RRL+ LV K +K++
Sbjct: 3 KMKTHSGAKKRFRVTGSGKIMRQQANRRHYLEHKSSRLTRRLKGDQLVSKGSIKQIKRM 61
>gi|403526591|ref|YP_006661478.1| 50S ribosomal protein L35 [Arthrobacter sp. Rue61a]
gi|403229018|gb|AFR28440.1| 50S ribosomal protein L35 [Arthrobacter sp. Rue61a]
Length = 61
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 147 MKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
MK++S K RF+ G+++R +RH KS + RRL LV AKV+KK+
Sbjct: 1 MKTHSGAKKRFKLTGTGKLKRQQANRRHYLEHKSSRLTRRLAGDKLVFKGDAKVIKKM 58
>gi|18310875|ref|NP_562809.1| 50S ribosomal protein L35 [Clostridium perfringens str. 13]
gi|110801128|ref|YP_696573.1| 50S ribosomal protein L35 [Clostridium perfringens ATCC 13124]
gi|110803127|ref|YP_699171.1| 50S ribosomal protein L35 [Clostridium perfringens SM101]
gi|168206056|ref|ZP_02632061.1| ribosomal protein L35 [Clostridium perfringens E str. JGS1987]
gi|168215519|ref|ZP_02641144.1| ribosomal protein L35 [Clostridium perfringens NCTC 8239]
gi|169343773|ref|ZP_02864772.1| ribosomal protein L35 [Clostridium perfringens C str. JGS1495]
gi|182626131|ref|ZP_02953891.1| ribosomal protein L35 [Clostridium perfringens D str. JGS1721]
gi|422346559|ref|ZP_16427473.1| 50S ribosomal protein L35 [Clostridium perfringens WAL-14572]
gi|422874810|ref|ZP_16921295.1| 50S ribosomal protein L35 [Clostridium perfringens F262]
gi|20139453|sp|Q8XJ68.1|RL35_CLOPE RecName: Full=50S ribosomal protein L35
gi|118573002|sp|Q0TP67.1|RL35_CLOP1 RecName: Full=50S ribosomal protein L35
gi|118573003|sp|Q0SRT6.1|RL35_CLOPS RecName: Full=50S ribosomal protein L35
gi|18145557|dbj|BAB81599.1| 50S ribosomal protein L35 [Clostridium perfringens str. 13]
gi|110675775|gb|ABG84762.1| 50S ribosomal protein L35 [Clostridium perfringens ATCC 13124]
gi|110683628|gb|ABG86998.1| 50S ribosomal protein L35 [Clostridium perfringens SM101]
gi|169298333|gb|EDS80423.1| ribosomal protein L35 [Clostridium perfringens C str. JGS1495]
gi|170662412|gb|EDT15095.1| ribosomal protein L35 [Clostridium perfringens E str. JGS1987]
gi|177908568|gb|EDT71093.1| ribosomal protein L35 [Clostridium perfringens D str. JGS1721]
gi|182382218|gb|EDT79697.1| ribosomal protein L35 [Clostridium perfringens NCTC 8239]
gi|373226104|gb|EHP48431.1| 50S ribosomal protein L35 [Clostridium perfringens WAL-14572]
gi|380304451|gb|EIA16740.1| 50S ribosomal protein L35 [Clostridium perfringens F262]
Length = 65
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++ RF+ G+++R H H KS K KR LR+ V A K MKKL
Sbjct: 3 KMKTHRGAAKRFKKTGTGKLKRAHAFTSHILTKKSAKRKRNLRKTGYVSTAQEKAMKKL 61
>gi|313203700|ref|YP_004042357.1| 50S ribosomal protein L35 [Paludibacter propionicigenes WB4]
gi|312443016|gb|ADQ79372.1| LSU ribosomal protein L35P [Paludibacter propionicigenes WB4]
Length = 65
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ S K RF G+++R H KRH K+ K KR L ALV
Sbjct: 3 KMKTNSGAKKRFTLTGSGKIKRKHAFKRHILTKKTTKQKRNLTHSALV 50
>gi|160878606|ref|YP_001557574.1| 50S ribosomal protein L35 [Clostridium phytofermentans ISDg]
gi|189042763|sp|A9KHG8.1|RL35_CLOPH RecName: Full=50S ribosomal protein L35
gi|160427272|gb|ABX40835.1| ribosomal protein L35 [Clostridium phytofermentans ISDg]
Length = 65
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+K+ + RF+ G+++R GK+H KS+K+KR LR+ ++ + K MKK+
Sbjct: 3 KLKTSKAAAKRFKVTGTGKLKRMKAGKQHILTKKSQKTKRNLRKATMMDPSNEKNMKKI 61
>gi|379729479|ref|YP_005321675.1| 50S ribosomal protein L35 [Saprospira grandis str. Lewin]
gi|424841550|ref|ZP_18266175.1| ribosomal protein L35 [Saprospira grandis DSM 2844]
gi|378575090|gb|AFC24091.1| 50S ribosomal protein L35 [Saprospira grandis str. Lewin]
gi|395319748|gb|EJF52669.1| ribosomal protein L35 [Saprospira grandis DSM 2844]
Length = 64
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+K++S K RF G+++R GK H SKK K RLR L AK +KK+
Sbjct: 3 KVKTHSGAKKRFSVTGSGKIKRRRSGKSHILTKMSKKRKLRLRHAGLCAPGDAKRVKKM 61
>gi|284045072|ref|YP_003395412.1| 50S ribosomal protein L35 [Conexibacter woesei DSM 14684]
gi|283949293|gb|ADB52037.1| ribosomal protein L35 [Conexibacter woesei DSM 14684]
Length = 66
Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKLN 205
KMK++S K RF+ G+VR H H KS K KRRL +PA + A +KKL
Sbjct: 3 KMKTHSGAKKRFKVSAKGKVRGRHAFTSHILEKKSPKRKRRLGRPAQISDHDAPRVKKLL 62
Query: 206 FCG 208
G
Sbjct: 63 GVG 65
>gi|225076638|ref|ZP_03719837.1| hypothetical protein NEIFLAOT_01688 [Neisseria flavescens
NRL30031/H210]
gi|241758573|ref|ZP_04756688.1| ribosomal protein L35 [Neisseria flavescens SK114]
gi|261377870|ref|ZP_05982443.1| ribosomal protein L35 [Neisseria cinerea ATCC 14685]
gi|261379893|ref|ZP_05984466.1| ribosomal protein L35 [Neisseria subflava NJ9703]
gi|261400403|ref|ZP_05986528.1| ribosomal protein L35 [Neisseria lactamica ATCC 23970]
gi|313668800|ref|YP_004049084.1| 50S ribosomal protein L35 [Neisseria lactamica 020-06]
gi|319637849|ref|ZP_07992615.1| 50S ribosomal protein L35 [Neisseria mucosa C102]
gi|422110394|ref|ZP_16380417.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|224952044|gb|EEG33253.1| hypothetical protein NEIFLAOT_01688 [Neisseria flavescens
NRL30031/H210]
gi|241321225|gb|EER57397.1| ribosomal protein L35 [Neisseria flavescens SK114]
gi|269145720|gb|EEZ72138.1| ribosomal protein L35 [Neisseria cinerea ATCC 14685]
gi|269209846|gb|EEZ76301.1| ribosomal protein L35 [Neisseria lactamica ATCC 23970]
gi|284797594|gb|EFC52941.1| ribosomal protein L35 [Neisseria subflava NJ9703]
gi|309378777|emb|CBX22603.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313006262|emb|CBN87724.1| 50S ribosomal protein L35 [Neisseria lactamica 020-06]
gi|317401004|gb|EFV81659.1| 50S ribosomal protein L35 [Neisseria mucosa C102]
Length = 65
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK+ SS K RF+ + +G V+R H K H K+ K+KR+LR A+V
Sbjct: 3 KMKTKSSAKKRFKVLGNGGVKRGHAFKSHILTKKTTKTKRQLRGTAMV 50
>gi|194335335|ref|YP_002017129.1| 50S ribosomal protein L35 [Pelodictyon phaeoclathratiforme BU-1]
gi|226725043|sp|B4SB91.1|RL35_PELPB RecName: Full=50S ribosomal protein L35
gi|194307812|gb|ACF42512.1| ribosomal protein L35 [Pelodictyon phaeoclathratiforme BU-1]
Length = 64
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMKS+ RF+T + G+++R HN K+ K RRL Q AL+ AK +K++
Sbjct: 3 KMKSHRGACKRFKTTSSGKIKRERMNGSHNLEKKNSKRCRRLHQTALLEGLKAKQIKRM 61
>gi|226227283|ref|YP_002761389.1| 50S ribosomal protein L35 [Gemmatimonas aurantiaca T-27]
gi|259647409|sp|C1A494.1|RL35_GEMAT RecName: Full=50S ribosomal protein L35
gi|226090474|dbj|BAH38919.1| 50S ribosomal protein L35 [Gemmatimonas aurantiaca T-27]
Length = 65
Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPL-AYAKVMKKL 204
KMK++S K RF G+VRR K H S K KR LR+P +V AK +K+L
Sbjct: 3 KMKTHSGAKKRFSVTGSGKVRRLKAYKSHILTKMSGKKKRDLRRPTIVETNGEAKRIKRL 62
>gi|83590592|ref|YP_430601.1| 50S ribosomal protein L35 [Moorella thermoacetica ATCC 39073]
gi|148887082|sp|Q2RHN1.1|RL35_MOOTA RecName: Full=50S ribosomal protein L35
gi|83573506|gb|ABC20058.1| LSU ribosomal protein L35P [Moorella thermoacetica ATCC 39073]
Length = 66
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALV 193
KMK++ R R G+V+R+ K H K+ K KRRLR PALV
Sbjct: 3 KMKTHRGAAKRLRVTASGKVKRFRAYKSHLLASKTPKQKRRLRHPALV 50
>gi|336323967|ref|YP_004603934.1| 50S ribosomal protein L35 [Flexistipes sinusarabici DSM 4947]
gi|336107548|gb|AEI15366.1| 50S ribosomal protein L35 [Flexistipes sinusarabici DSM 4947]
Length = 65
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+KS+ RF+ G+V+ +G RH K+ K KR LR P ++ AK +KKL
Sbjct: 3 KLKSHRGAAKRFKITASGKVKHKKQGLRHILTSKTAKRKRDLRHPGILEGQDAKNIKKL 61
>gi|291279883|ref|YP_003496718.1| 50S ribosomal protein L35 [Deferribacter desulfuricans SSM1]
gi|290754585|dbj|BAI80962.1| 50S ribosomal protein L35 [Deferribacter desulfuricans SSM1]
Length = 65
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
K+K++ RF+ G+V+ G RH K+KK KR LR P ++ A A+ +KKL
Sbjct: 3 KVKTHRGAAKRFKVTGSGKVKYKKAGLRHLLSSKAKKRKRALRHPGILEGADAQNVKKL 61
>gi|342732155|ref|YP_004770994.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455565|ref|YP_005668160.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417960695|ref|ZP_12603239.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-1]
gi|417964293|ref|ZP_12606042.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-4]
gi|417968727|ref|ZP_12609715.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-co]
gi|418016444|ref|ZP_12656009.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372408|ref|ZP_12964500.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329610|dbj|BAK56252.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506779|gb|EGX29073.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346983908|dbj|BAK79584.1| ribosomal protein L35 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380330384|gb|EIA21668.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-1]
gi|380339070|gb|EIA27872.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-co]
gi|380342077|gb|EIA30522.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|380342817|gb|EIA31248.1| 50S ribosomal protein L35 [Candidatus Arthromitus sp. SFB-4]
Length = 65
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ + RFR G ++R K+H KS K KR LR+ V + K MKKL
Sbjct: 3 KMKTKKAISKRFRVTGTGNLKRARAFKQHILTKKSAKRKRNLRKVGYVSVTQLKTMKKL 61
>gi|359412508|ref|ZP_09204973.1| 50S ribosomal protein L35 [Clostridium sp. DL-VIII]
gi|357171392|gb|EHI99566.1| 50S ribosomal protein L35 [Clostridium sp. DL-VIII]
Length = 65
Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK++ RF+ G+++R K H KS K+KR LR+ V KVMKKL
Sbjct: 3 KMKTHRGAAKRFKKTGTGKLKRAKAFKSHILTKKSSKTKRNLRKAGYVSETQVKVMKKL 61
>gi|347542235|ref|YP_004856871.1| ribosomal protein L35 [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985270|dbj|BAK80945.1| ribosomal protein L35 [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 65
Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ + RFR G ++R K+H KS K KR LR+ V + K MKKL
Sbjct: 3 KMKTKKAIAKRFRVTGTGNLKRARAFKQHILTKKSAKRKRNLRKVGYVSVTQLKTMKKL 61
>gi|336424709|ref|ZP_08604744.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336014242|gb|EGN44099.1| 50S ribosomal protein L35 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 65
Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ S RF+ G+++R K H KS K KR LR+PA+ K MKK+
Sbjct: 3 KMKTSRSAAKRFKVTGTGKLKRSKAYKSHILTKKSTKRKRNLRKPAITDATNVKNMKKI 61
>gi|375256056|ref|YP_005015223.1| 50S ribosomal protein L35 [Tannerella forsythia ATCC 43037]
gi|363408426|gb|AEW22112.1| ribosomal protein L35 [Tannerella forsythia ATCC 43037]
Length = 65
Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 146 KMKSYSSYKSRFRTMNDGQVRRWHEGKRHNAHLKSKKSKRRLRQPALVPLAYAKVMKKL 204
KMK+ S K RF G+++R H K H K+KK KR L LV A + +K++
Sbjct: 3 KMKTNSGAKKRFALTGTGKIKRKHAFKSHILTKKTKKQKRNLTATGLVDSANVRSVKEM 61
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.128 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,074,315,440
Number of Sequences: 23463169
Number of extensions: 118012410
Number of successful extensions: 305781
Number of sequences better than 100.0: 695
Number of HSP's better than 100.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 304789
Number of HSP's gapped (non-prelim): 970
length of query: 208
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 72
effective length of database: 9,168,204,383
effective search space: 660110715576
effective search space used: 660110715576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)