BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028490
(208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1H5C9|OP24A_ARATH Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis
thaliana GN=OEP24A PE=1 SV=1
Length = 213
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 141/204 (69%), Gaps = 9/204 (4%)
Query: 10 RKGLTGTVAADAGELKLRAYV-----IAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRF 64
+ G ++ +AG KLRA + +AGP+ N LS +VEKPG F++D++VP+K+VRF
Sbjct: 14 KSGSVASLTFNAGNAKLRATMTDASFVAGPSFNG--LSLAVEKPGFFIIDYNVPKKDVRF 71
Query: 65 QFMNTARILEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHR 124
QFMNT RI EK L +TY HM G+NRTI+DG+ ++DP NK+SANY++ ++N KL+Y+YVH
Sbjct: 72 QFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGTKNCKLKYTYVHG 131
Query: 125 GMATFEPCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFNRDGKCKVS 184
G+ATFEPCYD KN W+ A+S ++ GD ++A+Y S K+ LG W + G KV
Sbjct: 132 GIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKM--LGLEWSNNSKSTGSFKVC 189
Query: 185 ASFRLGEGLYMPTLTAESSWDFEM 208
AS L E L P LTAE++W+ E+
Sbjct: 190 ASMNLAEELKPPKLTAETTWNLEL 213
>sp|Q8H0Y1|OP24B_ARATH Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis
thaliana GN=OEP24B PE=1 SV=1
Length = 213
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 141/199 (70%), Gaps = 10/199 (5%)
Query: 15 GTVAADAGELKLRAY-----VIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNT 69
G++A +AG++KLRA ++AGP L + L+ +VEKPGSF+V+++VP+K+VRFQFMNT
Sbjct: 20 GSLAFNAGDIKLRATMTDATLVAGPTL--TGLALAVEKPGSFIVEYNVPKKDVRFQFMNT 77
Query: 70 ARILEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMATF 129
RI EK L +TY H +NRTI+DG+L++D NK+SAN+++ + N K++Y+Y H G+ATF
Sbjct: 78 VRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGTNNCKIKYTYAHGGLATF 137
Query: 130 EPCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFNRDGKCKVSASFRL 189
EPCYD KN+W+ AVS+ + GD +RA+Y S K+L + W N+ KV AS L
Sbjct: 138 EPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEW---SRNNKASGFKVCASVNL 194
Query: 190 GEGLYMPTLTAESSWDFEM 208
+ L P LTAE++W+ EM
Sbjct: 195 ADELKTPKLTAETTWNLEM 213
>sp|O49929|OEP24_PEA Outer envelope pore protein 24, chloroplastic OS=Pisum sativum
GN=OEP24 PE=1 SV=1
Length = 213
Score = 196 bits (499), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 132/197 (67%), Gaps = 5/197 (2%)
Query: 15 GTVAADAGELKLRAYVIAGPALNASDLS---FSVEKPGSFLVDFDVPQKNVRFQFMNTAR 71
TVA +AG++KLRA + N+ L+ +VEKPGSF VD++VP+K+ RFQFMNT R
Sbjct: 19 ATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFSVDYNVPKKDFRFQFMNTVR 78
Query: 72 ILEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMATFEP 131
+ EK L + Y H G+NRTILDGTL+ DP+NK+SANY ++S N KL+YSY H+G+ T EP
Sbjct: 79 VAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVESGNCKLKYSYNHKGLTTIEP 138
Query: 132 CYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFNRDGKCKVSASFRLGE 191
YD KNSW+ AVS V+ D ++ASY S KV LG W + + G KV AS L E
Sbjct: 139 TYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKV--LGLEWTRNSKQTGCFKVVASVNLAE 196
Query: 192 GLYMPTLTAESSWDFEM 208
+P L+ ES+ +FEM
Sbjct: 197 EKKIPKLSVESTLNFEM 213
>sp|B8ANR3|OEP24_ORYSI Outer envelope pore protein 24, chloroplastic OS=Oryza sativa
subsp. indica GN=OEP24 PE=3 SV=1
Length = 224
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 22/190 (11%)
Query: 33 GPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARILEKQLYMTYTHMTG------ 86
GP+L L+ ++EKPGSFL+D K+VRFQFMN+A +L++++ +TYTH T
Sbjct: 43 GPSLEG--LTLTLEKPGSFLLDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPA 100
Query: 87 --ENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRG--MATFEPCYDFGKNSWEL 142
RT LDG+L DP NK+S ++ L S +++YSY H + T EPC+D N+W+
Sbjct: 101 KPPARTALDGSLTFDPANKLSLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDF 160
Query: 143 AVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFNRDGKC----KVSASFRLGEGLYMPTL 198
AV++ GD I+A+Y S K+L L W RD K KV+ASF L + P L
Sbjct: 161 AVTRKFQGGDAIKATYQASTKLLALDW------TRDSKIGASFKVAASFDLSDQSKAPKL 214
Query: 199 TAESSWDFEM 208
AES+W++E+
Sbjct: 215 IAESTWNYEI 224
>sp|Q75IQ4|OEP24_ORYSJ Outer envelope pore protein 24, chloroplastic OS=Oryza sativa
subsp. japonica GN=OEP24 PE=2 SV=1
Length = 224
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 113/190 (59%), Gaps = 22/190 (11%)
Query: 33 GPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARILEKQLYMTYTHMTG------ 86
GP+L L ++EKPGSFL+D K+VRFQFMN+A +L++++ +TYTH T
Sbjct: 43 GPSLEG--LILTLEKPGSFLLDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPA 100
Query: 87 --ENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRG--MATFEPCYDFGKNSWEL 142
RT LDG+L DP NK+S ++ L S +++YSY H + T EPC+D N+W+
Sbjct: 101 KLPARTALDGSLTFDPANKLSLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDF 160
Query: 143 AVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFNRDGKC----KVSASFRLGEGLYMPTL 198
AV++ GD I+A+Y S K+L L W RD K KV+ASF L + P L
Sbjct: 161 AVTRKFQGGDAIKATYQASTKLLALDW------TRDSKIGASFKVAASFDLSDQSKAPKL 214
Query: 199 TAESSWDFEM 208
AES+W++E+
Sbjct: 215 IAESTWNYEI 224
>sp|Q2YSI6|PEPT_STAAB Peptidase T OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=pepT PE=3 SV=1
Length = 408
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + AD + A+V P NAS++ KP + ++D + ++ NT R+
Sbjct: 62 LESNIDADVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----SKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|P65806|PEPT_STAAN Peptidase T OS=Staphylococcus aureus (strain N315) GN=pepT PE=3
SV=1
Length = 408
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + AD + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDADVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|P65805|PEPT_STAAM Peptidase T OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=pepT PE=1 SV=1
Length = 408
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + AD + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDADVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|A5IQU7|PEPT_STAA9 Peptidase T OS=Staphylococcus aureus (strain JH9) GN=pepT PE=3 SV=1
Length = 408
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + AD + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDADVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|A6TZM2|PEPT_STAA2 Peptidase T OS=Staphylococcus aureus (strain JH1) GN=pepT PE=3 SV=1
Length = 408
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + AD + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDADVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|A7WZN6|PEPT_STAA1 Peptidase T OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
GN=pepT PE=3 SV=1
Length = 408
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + AD + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDADVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|Q6GIP8|PEPT_STAAR Peptidase T OS=Staphylococcus aureus (strain MRSA252) GN=pepT PE=3
SV=1
Length = 408
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + AD + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDADVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|Q8NXM6|PEPT_STAAW Peptidase T OS=Staphylococcus aureus (strain MW2) GN=pepT PE=3 SV=1
Length = 408
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + D + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDVDVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|A8Z018|PEPT_STAAT Peptidase T OS=Staphylococcus aureus (strain USA300 / TCH1516)
GN=pepT PE=3 SV=1
Length = 408
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + D + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDVDVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|Q6GB87|PEPT_STAAS Peptidase T OS=Staphylococcus aureus (strain MSSA476) GN=pepT PE=3
SV=1
Length = 408
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + D + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDVDVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|A6QF52|PEPT_STAAE Peptidase T OS=Staphylococcus aureus (strain Newman) GN=pepT PE=3
SV=1
Length = 408
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + D + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDVDVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|Q5HHS7|PEPT_STAAC Peptidase T OS=Staphylococcus aureus (strain COL) GN=pepT PE=3 SV=1
Length = 408
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + D + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDVDVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|Q2G064|PEPT_STAA8 Peptidase T OS=Staphylococcus aureus (strain NCTC 8325) GN=pepT
PE=3 SV=1
Length = 408
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + D + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDVDVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|Q2FIP8|PEPT_STAA3 Peptidase T OS=Staphylococcus aureus (strain USA300) GN=pepT PE=3
SV=1
Length = 408
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 19/166 (11%)
Query: 13 LTGTVAADAGELKLRAYVIAGPALNASDLSFSVEKPGSFLVDFDVPQKNVRFQFMNTARI 72
L + D + A+V P NAS++ KP + ++D ++ NT R+
Sbjct: 62 LESNIDVDVPTVGFLAHVDTSPDFNASNV-----KP-QIIENYD----GKPYKLGNTKRV 111
Query: 73 LEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYSYVHRGMAT--FE 130
L+ +++ + G + DGT LL +K ++++ + + G F
Sbjct: 112 LDPKVFPELNSLVGHTLMVTDGTSLLGADDKAGIVEIMEAICYLQEHPEIKHGTIRIGFT 171
Query: 131 PCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSFN 176
P + G+ + FD D A + + G L SFN
Sbjct: 172 PDEEIGRGPHK-------FDVDRFNADFAYTMDGSQYGELQYESFN 210
>sp|A9AYM5|SYN_HERA2 Asparagine--tRNA ligase OS=Herpetosiphon aurantiacus (strain ATCC
23779 / DSM 785) GN=asnS PE=3 SV=1
Length = 447
Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 22/122 (18%)
Query: 72 ILEKQLYMTYTHMTGENRTILDGTLLLDPTNKISANYVLDSRNLKLRYS---YVHRGMAT 128
I Q Y+ H + IL T + T+ + A D N L + YV GMAT
Sbjct: 141 IAAAQEYLNSEHFVRYDSPILTATAA-EGTSDLFATEYFDLGNAYLAQTGQLYVESGMAT 199
Query: 129 FEPCYDFGKNSWELAVSKTVFDGDVIRASYDKSRKVLDLGWLWKPSF---NRDGKCKVSA 185
F Y FG RA K+R+ L W+ +P F ++D ++
Sbjct: 200 FGRVYCFGPT---------------FRAEKSKTRRHLTEFWMIEPEFAFADQDDNMELQE 244
Query: 186 SF 187
+F
Sbjct: 245 NF 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,745,558
Number of Sequences: 539616
Number of extensions: 3013891
Number of successful extensions: 5532
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5512
Number of HSP's gapped (non-prelim): 31
length of query: 208
length of database: 191,569,459
effective HSP length: 112
effective length of query: 96
effective length of database: 131,132,467
effective search space: 12588716832
effective search space used: 12588716832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)