BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028491
(208 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255538678|ref|XP_002510404.1| conserved hypothetical protein [Ricinus communis]
gi|223551105|gb|EEF52591.1| conserved hypothetical protein [Ricinus communis]
Length = 205
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 175/208 (84%), Gaps = 3/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG+I+GVR+C+EILK H G+ + E + SRFGCV SS S P +KGLEN++VA
Sbjct: 1 MQGLIRGVRSCKEILKIGTQRHSHGKEIFERKNIFSRFGCVTSSPSLP--QKGLENLTVA 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VLMTKGD+K GSWL C S+DTV DAVKNMA++NIGSL+VLKPGE+ H+AGI TERDYLR
Sbjct: 59 DVLMTKGDEKTGSWLWCHSNDTVYDAVKNMAENNIGSLLVLKPGEK-HLAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMIS 180
K++ +GRS YTRVAEIMTDEN+L+T+ SD IL AMQLMTD HIRHVPVIDGRIVGMIS
Sbjct: 118 KVIAEGRSCHYTRVAEIMTDENRLVTVTSDTTILRAMQLMTDHHIRHVPVIDGRIVGMIS 177
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRGEYY 208
+VDVVRAVVEQQ GELK+LN+FIRGEYY
Sbjct: 178 MVDVVRAVVEQQSGELKQLNDFIRGEYY 205
>gi|224085680|ref|XP_002307661.1| predicted protein [Populus trichocarpa]
gi|222857110|gb|EEE94657.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 178/208 (85%), Gaps = 7/208 (3%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
M+G+++G+R+CQE L+ AIL+H + R R+ SRFG V +SS P EKGLEN++VA
Sbjct: 1 MEGLVRGIRSCQETLRVAILKHPRDR-----REIFSRFGRV--TSSLPVREKGLENLTVA 53
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VLMTKG+DK+GSWL CR+ D+V DAV+NMA++NIGSLVVLKPGEQ+ IAGI TERDY+R
Sbjct: 54 DVLMTKGEDKIGSWLWCRTTDSVYDAVENMAKNNIGSLVVLKPGEQELIAGIITERDYMR 113
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMIS 180
KI+ QGRS KYTRV EIMTDE+KL+T+ SD +IL AMQLMTD HIRHVPVIDG+IVGM+S
Sbjct: 114 KIIAQGRSSKYTRVGEIMTDEDKLVTVTSDTSILQAMQLMTDHHIRHVPVIDGKIVGMVS 173
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRGEYY 208
IVDVVRAVVEQQ GELKRLNEFI+GEYY
Sbjct: 174 IVDVVRAVVEQQGGELKRLNEFIKGEYY 201
>gi|224062121|ref|XP_002300765.1| predicted protein [Populus trichocarpa]
gi|222842491|gb|EEE80038.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 170/205 (82%), Gaps = 4/205 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG+++GVR+CQE L+ AIL H R ++E RK S GCV +SS P EKGLEN++VA
Sbjct: 1 MQGLVQGVRSCQETLRVAILRHPHVRDIIERRKILSHSGCV--TSSPPVGEKGLENLTVA 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL+TKG++K+GSWL CR+ DTV DAVKNMAQ+NIGSLVVL GE++ IAGI TERDYLR
Sbjct: 59 DVLVTKGEEKLGSWLWCRTTDTVYDAVKNMAQNNIGSLVVL--GERELIAGIITERDYLR 116
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMIS 180
KI+ QGRS KYTRV EIMTDENKLIT+ SD NIL AM+LMTD HIRHVPVIDG I GM+S
Sbjct: 117 KIIAQGRSSKYTRVGEIMTDENKLITVASDTNILQAMKLMTDNHIRHVPVIDGTIAGMVS 176
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRG 205
+VDVVRAVVEQQ ELKRLNEFI+G
Sbjct: 177 MVDVVRAVVEQQGRELKRLNEFIKG 201
>gi|225458255|ref|XP_002281327.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
[Vitis vinifera]
Length = 207
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 171/209 (81%), Gaps = 3/209 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPT-EEKGLENISV 59
MQG+ + R+CQE LK AIL+H GR + SR CV ++S+PT E+KGLEN +V
Sbjct: 1 MQGIGRATRSCQETLKLAILQHCHGRSTAGRKNVFSRHECV--TTSNPTMEQKGLENTTV 58
Query: 60 AEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYL 119
AEVLMTKG++K GSWL CR++DTV DA K+MA++NIGSLVVLKPGE +HIAGIFTERDY+
Sbjct: 59 AEVLMTKGEEKSGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYM 118
Query: 120 RKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMI 179
RKI+ GRS K T+V EIMTDENKL+T+ SD NIL AMQL+T+ IRHVPVIDG+IVGMI
Sbjct: 119 RKIIAHGRSSKDTKVGEIMTDENKLVTVSSDTNILQAMQLLTEYQIRHVPVIDGKIVGMI 178
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
SIVD+VRAVVE Q GE+KRLNEFI+G+YY
Sbjct: 179 SIVDIVRAVVELQSGEVKRLNEFIKGDYY 207
>gi|356518816|ref|XP_003528073.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 165/208 (79%), Gaps = 3/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
M G+ + +R Q GAI + QG ++ K S FGCV +SS ++KGLEN++V+
Sbjct: 1 MLGVYRILRLRQNPPSGAIFQRFQGNGILNLNKIYSNFGCV--TSSPRMQQKGLENVTVS 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
EVLMTKG++ VGSWL CR+DD V +A+KNMA +NIGSLVVLKP E QHIAGI TERD L+
Sbjct: 59 EVLMTKGEENVGSWLWCRADDAVVNAMKNMADNNIGSLVVLKP-EGQHIAGIVTERDCLK 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMIS 180
KIV QGRSP +T+V +IMTDEN LIT+ SD NIL AM++MT+ HIRHVPVIDG+IVGMIS
Sbjct: 118 KIVAQGRSPLHTQVGQIMTDENNLITVTSDTNILKAMKIMTENHIRHVPVIDGKIVGMIS 177
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRGEYY 208
IVDVVRAV+EQQ GELKRLN++IRG+YY
Sbjct: 178 IVDVVRAVMEQQSGELKRLNDYIRGQYY 205
>gi|356509678|ref|XP_003523573.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/208 (63%), Positives = 165/208 (79%), Gaps = 3/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
M G+ + +R Q +GAI + QG+ ++ K S+FGC ++SS ++KGLEN++V+
Sbjct: 1 MLGVYRILRLRQNPQRGAIFQQFQGKGILNLNKIYSKFGC--ATSSPRMQQKGLENVTVS 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
EVLMTKG+ VGSWL CR DD V +A+KNMA +NIGSLVVLKP E QHIAGI TERD L+
Sbjct: 59 EVLMTKGEANVGSWLWCRVDDAVINAMKNMADNNIGSLVVLKP-EGQHIAGIITERDCLK 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMIS 180
KIV QGRSP +T V +IMTDEN LIT+ S+ NIL AM++MT+ HIRHVPVIDG+IVGMIS
Sbjct: 118 KIVAQGRSPLHTHVGQIMTDENNLITVTSNTNILQAMKIMTENHIRHVPVIDGKIVGMIS 177
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRGEYY 208
IVDVVRAV+EQQ GELKRLN+++RGEYY
Sbjct: 178 IVDVVRAVMEQQSGELKRLNDYVRGEYY 205
>gi|297846924|ref|XP_002891343.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
gi|297337185|gb|EFH67602.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
Length = 192
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 148/176 (84%), Gaps = 4/176 (2%)
Query: 33 KTCSRFGCVISSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQ 92
K + FGCV +S P EKGLEN++VA+VL TK D V +W+ CR++DTV DAVKNMA+
Sbjct: 21 KVSASFGCV---TSPPPPEKGLENLTVADVLSTK-DADVDTWISCRTNDTVSDAVKNMAK 76
Query: 93 HNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDAN 152
HNIGSLVVLKPG+QQ+IAGI TERDY++KI+G GRS K T+V ++MTDE+KL+T+ S N
Sbjct: 77 HNIGSLVVLKPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGDVMTDESKLVTVSSGTN 136
Query: 153 ILHAMQLMTDKHIRHVPVIDGRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
I+ AMQLM++ HIRHVPVIDG+IVG+IS+VDVVRA+V+ Q GELKRLNEFI+G+YY
Sbjct: 137 IIKAMQLMSENHIRHVPVIDGKIVGLISMVDVVRAIVDHQNGELKRLNEFIKGDYY 192
>gi|186489216|ref|NP_001117443.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
gi|332194027|gb|AEE32148.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
Length = 193
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 149/177 (84%), Gaps = 4/177 (2%)
Query: 32 RKTCSRFGCVISSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMA 91
RK + FGC+ +S P EKGLEN++VA+VL TK D + +W+ CR++DTV DAVKNMA
Sbjct: 21 RKVSAGFGCL---TSPPPPEKGLENLTVADVLSTK-DTDIDTWISCRTNDTVSDAVKNMA 76
Query: 92 QHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDA 151
+HNIGSLVVL+PG+QQ+IAGI TERDY++KI+G GRS K T+V E+MTDE+KL+T+ S
Sbjct: 77 KHNIGSLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGT 136
Query: 152 NILHAMQLMTDKHIRHVPVIDGRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
NI+ AMQLM++ HIRHVPVIDG+IVG+IS+VDVV+A+V+ Q GELKRLNEFI+G+YY
Sbjct: 137 NIIKAMQLMSENHIRHVPVIDGKIVGLISMVDVVKAIVDHQNGELKRLNEFIKGDYY 193
>gi|449469967|ref|XP_004152690.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
gi|449520034|ref|XP_004167039.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
Length = 206
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 154/209 (73%), Gaps = 4/209 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG+++ VR+ QE LK + H Y E K + + S + K LENI+V
Sbjct: 1 MQGVMRAVRSWQETLKKITVMQHS--YRREMSKVKNILEGLELEGGSSSSLKSLENITVR 58
Query: 61 EVLMTKGDDKVGS-WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYL 119
E++ KG+ +GS W+ CR++DT DAV+NMA+HNIGSLVV+K E ++IAGI TERDYL
Sbjct: 59 EIVSKKGEGGIGSSWISCRAEDTAIDAVQNMARHNIGSLVVMKS-EGENIAGIVTERDYL 117
Query: 120 RKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMI 179
+KI+ GRSP YT+V EIMT E+KL+T+ SD NIL AMQLMT+ HIRH+PVIDG++VGMI
Sbjct: 118 KKIIADGRSPIYTKVGEIMTHEDKLVTITSDTNILKAMQLMTENHIRHIPVIDGKLVGMI 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
SIVDV RAVV+QQ GEL++LN +I+GEYY
Sbjct: 178 SIVDVARAVVKQQNGELEQLNNYIKGEYY 206
>gi|257209020|emb|CBB36496.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ ++ VR+ +LK A+L+H SRF +S+SS+ E+ G E +V+
Sbjct: 1 MQRAVQAVRSHGSVLKYAVLQHISAPKPAMLPAVFSRF---MSASSARLEDSGFETATVS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL +KG GSWL C ++DTV DAVK+M QHN+G+LVV+KPGE + IAGI TERDYLR
Sbjct: 58 DVLKSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ + +L AMQLMTD IRH+PVIDG ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDGTGMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN++I+G Y
Sbjct: 178 SIGDVVRAVVAEHREELNRLNDYIQGGY 205
>gi|257209009|emb|CBB36473.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 147/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ ++ VR+ +LK A+L+H SRF +S SS+ E+ G E +V+
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAVFSRF---MSVSSARLEDSGFETATVS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL +KG GSWL C ++DTV DAVK+M QHN+G+LVV+KPGE + IAGI TERDYLR
Sbjct: 58 DVLKSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ + +L AMQLMTD IRH+PVIDG ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDGTEMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN++I+G Y
Sbjct: 178 SIGDVVRAVVAEHREELNRLNDYIQGGY 205
>gi|226490863|ref|NP_001150216.1| CBS domain protein [Zea mays]
gi|194708182|gb|ACF88175.1| unknown [Zea mays]
gi|195613652|gb|ACG28656.1| CBS domain protein [Zea mays]
gi|195637616|gb|ACG38276.1| CBS domain protein [Zea mays]
gi|414872655|tpg|DAA51212.1| TPA: CBS domain protein isoform 1 [Zea mays]
gi|414872656|tpg|DAA51213.1| TPA: CBS domain protein isoform 2 [Zea mays]
gi|414872657|tpg|DAA51214.1| TPA: CBS domain protein isoform 3 [Zea mays]
Length = 205
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ ++ VR+ +LK A+L+H SRF +S SS+ E++G E +VA
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRF---MSVSSARLEDRGFETATVA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL +KG GSWL C ++D+V DAVK+M QHN+G+LVV+KPG+ + IAGI TERDYLR
Sbjct: 58 DVLKSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMT+ +RH+PVIDG ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQLMTENRVRHIPVIDGTGMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN++I+G Y
Sbjct: 178 SIGDVVRAVVAEHREELNRLNDYIQGGY 205
>gi|224117650|ref|XP_002331597.1| predicted protein [Populus trichocarpa]
gi|222873993|gb|EEF11124.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 147/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ T ++K ++ +H + V SRF V SS+P EE G E+ ++A
Sbjct: 1 MQGALRTFLTHGNVVKDSLFQHLRVSSPVLRPVVFSRFESV---SSAPIEETGFESTTIA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG + GSWL C +DDTV DAVK+M HN+G+LVV+K GEQ+ IAGI TERDYLR
Sbjct: 58 DILKEKGKNADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKHGEQESIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD+ IRH+PVID + ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVAHDTKVLKAMQLMTDRRIRHIPVIDDKGMIGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 178 SIGDVVRAVVSEYREELDRLNAYIQGGY 205
>gi|357116495|ref|XP_003560016.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 147/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ I+ + + +LK A+L+H V + + F +S SS+ EE G E+ +VA
Sbjct: 1 MQRAIQAIGSHGSMLKSAVLQHVS---VAKPAMLPAVFSRSMSVSSAQIEESGFESGTVA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L +KG GSWL C ++DTV DAVK+M QHN+G+LVV+KPG+ + IAGI TERDYLR
Sbjct: 58 DILKSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTDK IRH+PVID +VGM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVIDSTGMVGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI D+VRAVV + K EL RLN +I+G Y
Sbjct: 178 SIGDIVRAVVSEHKEELNRLNAYIQGGY 205
>gi|15238284|ref|NP_196647.1| CBS domain-containing protein [Arabidopsis thaliana]
gi|20455364|sp|Q9LEV3.1|CBSX3_ARATH RecName: Full=CBS domain-containing protein CBSX3, mitochondrial;
Flags: Precursor
gi|13605728|gb|AAK32857.1|AF361845_1 AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|8979720|emb|CAB96841.1| putative protein [Arabidopsis thaliana]
gi|17978887|gb|AAL47413.1| AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|332004220|gb|AED91603.1| CBS domain-containing protein [Arabidopsis thaliana]
Length = 206
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 151/210 (71%), Gaps = 7/210 (3%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPT--EEKGLENIS 58
MQG+I+ + ++KG++L+H + V+ S F C S S+ P EE G E+ +
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLR---VINPAIQPSVF-CSRSESTQPARMEESGFESTT 56
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++V+ +KG GSWL C +DDTV DAVK+M QHN+G+LVV+KPGEQQ +AGI TERDY
Sbjct: 57 ISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDY 116
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
LRKI+ QGRS K T+V +IMT+ENKLIT+ + +L AMQLMTD IRH+PVI D ++G
Sbjct: 117 LRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIG 176
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
M+SI DVVRAVV + + EL+RLN +I+G Y
Sbjct: 177 MVSIGDVVRAVVHEHREELQRLNAYIQGGY 206
>gi|224127037|ref|XP_002319991.1| predicted protein [Populus trichocarpa]
gi|222858367|gb|EEE95914.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 147/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ T ++K ++L+H + + SRF V SS+ EE G E+ +A
Sbjct: 1 MQGALRACLTHGNVVKDSLLQHVRVLSPLLRPIVFSRFESV---SSARIEEHGFESTRIA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M QHN+G+LVV+KPGEQ+ IAGI TERDYLR
Sbjct: 58 DILKEKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTDK IRH+PVID + ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDKRIRHIPVIDDKEMIGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + E+ RLN +I+G Y
Sbjct: 178 SIGDVVRAVVSEHREEVDRLNAYIQGGY 205
>gi|116781417|gb|ABK22092.1| unknown [Picea sitchensis]
Length = 205
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ ++ I K +IL+H + K +R V S + EE G E+ ++A
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESV---SPARLEESGFESTTIA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M QHN+G+L+V+KP E++ IAGI TERDYLR
Sbjct: 58 DILKGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ SD +L AMQLMTD IRH+PV++G+ ++GM+
Sbjct: 118 KIIVQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVVEGKSMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV++ + ELKRLN FI+G Y
Sbjct: 178 SIGDVVRAVVDEHREELKRLNAFIQGGY 205
>gi|116782877|gb|ABK22702.1| unknown [Picea sitchensis]
Length = 205
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ ++ I K +IL+H + K +R V S + EE G E+ ++A
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESV---SPARLEEHGFESTTIA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M QHN+G+L+V+KP E++ IAGI TERDYLR
Sbjct: 58 DILKGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ SD +L AMQLMTD IRH+PV++G+ ++GM+
Sbjct: 118 KIIVQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVVEGKSMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV++ + ELKRLN FI+G Y
Sbjct: 178 SIGDVVRAVVDEHREELKRLNAFIQGGY 205
>gi|297811195|ref|XP_002873481.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319318|gb|EFH49740.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 150/210 (71%), Gaps = 7/210 (3%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPT--EEKGLENIS 58
MQ +++ + + ++K ++L+H + V+ S F C S S+ P EE G E+ +
Sbjct: 1 MQAVVRSLVSGGNVVKASVLQHLR---VINPAIQPSVF-CSRSESTQPARMEETGFESTT 56
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++V+ +KG GSWL C +DDTV DAVK+M QHN+G+LVV+KPGEQQ +AGI TERDY
Sbjct: 57 ISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQVLAGIITERDY 116
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
LRKI+ QGRS K T+V +IMT+ENKLIT+ + +L AMQLMTD IRH+PVI D ++G
Sbjct: 117 LRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIG 176
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
M+SI DVVRAVV + + EL+RLN FI+G Y
Sbjct: 177 MVSIGDVVRAVVHEHREELQRLNAFIQGGY 206
>gi|297745725|emb|CBI15781.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 147/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG I+ + + I+K A+L HQ R V + F + S +S+ EE G E+ ++A
Sbjct: 58 MQGAIQAIVSHGSIVKNAVL--HQIRLVNPIMPSVV-FSRLQSVTSARMEEHGFESTTIA 114
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL KG GSWL C +DD+V DAVK+M HN+G+LVV+KPGEQ+ IAGI TERDYLR
Sbjct: 115 DVLKGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLR 174
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ + +L AMQLMTD IRH+PVID + ++GM+
Sbjct: 175 KIIVQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVIDDKEMIGMV 234
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 235 SIGDVVRAVVTEHREELDRLNAYIQGGY 262
>gi|224285803|gb|ACN40616.1| unknown [Picea sitchensis]
Length = 205
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ ++ I K +IL+H + K +R V S + EE G E+ ++A
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESV---SPARLEESGFESTTIA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M QH++G+L+V+KP E++ IAGI TERDYLR
Sbjct: 58 DILKGKGKSADGSWLWCTTDDTVYDAVKSMTQHDVGALLVVKPVEEKSIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ SD +L AMQLMTD IRH+PV++G+ ++GM+
Sbjct: 118 KIIVQGRSSKTTKVGDIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVVEGKSMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV++ + ELKRLN FI+G Y
Sbjct: 178 SIGDVVRAVVDEHREELKRLNAFIQGGY 205
>gi|225434277|ref|XP_002262902.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 1 [Vitis vinifera]
gi|225434279|ref|XP_002262927.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 2 [Vitis vinifera]
gi|225434281|ref|XP_002262956.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 3 [Vitis vinifera]
Length = 205
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 147/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG I+ + + I+K A+L HQ R V + F + S +S+ EE G E+ ++A
Sbjct: 1 MQGAIQAIVSHGSIVKNAVL--HQIRLVNPIMPSVV-FSRLQSVTSARMEEHGFESTTIA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL KG GSWL C +DD+V DAVK+M HN+G+LVV+KPGEQ+ IAGI TERDYLR
Sbjct: 58 DVLKGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ + +L AMQLMTD IRH+PVID + ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVIDDKEMIGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 178 SIGDVVRAVVTEHREELDRLNAYIQGGY 205
>gi|125545649|gb|EAY91788.1| hypothetical protein OsI_13431 [Oryza sativa Indica Group]
Length = 233
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 146/211 (69%), Gaps = 10/211 (4%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTC---SRFGCVISSSSSPTEEKGLENI 57
MQ I+ + + +LK A+L H + K + + +S SS+ EE G E
Sbjct: 29 MQRAIQAIGSHGSLLKSAVLRH------ISAPKPSILPAVYSRSMSVSSAQIEESGFETA 82
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +KG GSWL C +DD+V DAVK+M QHN+G+LVV+KPG+ + IAGI TERD
Sbjct: 83 TVADILKSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERD 142
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IV 176
YLRKI+ QGRS K T+V +IMT+EN+LIT+ D +L AMQLMT+K IRH+PVIDG +V
Sbjct: 143 YLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMV 202
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
GM+SI D+VRAVV + + EL RLN +I+G Y
Sbjct: 203 GMVSIGDIVRAVVSEHREELNRLNAYIQGGY 233
>gi|115455195|ref|NP_001051198.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|29788876|gb|AAP03422.1| unknown protein [Oryza sativa Japonica Group]
gi|32352166|dbj|BAC78576.1| hypothetical protein [Oryza sativa Japonica Group]
gi|37999993|gb|AAR07080.1| unknown protein [Oryza sativa Japonica Group]
gi|108710961|gb|ABF98756.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710962|gb|ABF98757.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710963|gb|ABF98758.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549669|dbj|BAF13112.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|215692663|dbj|BAG88083.1| unnamed protein product [Oryza sativa Japonica Group]
gi|301087459|gb|ADK60921.1| CBSX4 [Oryza sativa Indica Group]
Length = 205
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 146/211 (69%), Gaps = 10/211 (4%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTC---SRFGCVISSSSSPTEEKGLENI 57
MQ I+ + + +LK A+L H + K + + +S SS+ EE G E
Sbjct: 1 MQRAIQAIGSHGSLLKSAVLRH------ISAPKPSILPAVYSRSMSVSSAQIEESGFETA 54
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +KG GSWL C +DD+V DAVK+M QHN+G+LVV+KPG+ + IAGI TERD
Sbjct: 55 TVADILKSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERD 114
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IV 176
YLRKI+ QGRS K T+V +IMT+EN+LIT+ D +L AMQLMT+K IRH+PVIDG +V
Sbjct: 115 YLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMV 174
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
GM+SI D+VRAVV + + EL RLN +I+G Y
Sbjct: 175 GMVSIGDIVRAVVSEHREELNRLNAYIQGGY 205
>gi|108710960|gb|ABF98755.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 230
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 146/211 (69%), Gaps = 10/211 (4%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTC---SRFGCVISSSSSPTEEKGLENI 57
MQ I+ + + +LK A+L H + K + + +S SS+ EE G E
Sbjct: 26 MQRAIQAIGSHGSLLKSAVLRH------ISAPKPSILPAVYSRSMSVSSAQIEESGFETA 79
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +KG GSWL C +DD+V DAVK+M QHN+G+LVV+KPG+ + IAGI TERD
Sbjct: 80 TVADILKSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERD 139
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IV 176
YLRKI+ QGRS K T+V +IMT+EN+LIT+ D +L AMQLMT+K IRH+PVIDG +V
Sbjct: 140 YLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMV 199
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
GM+SI D+VRAVV + + EL RLN +I+G Y
Sbjct: 200 GMVSIGDIVRAVVSEHREELNRLNAYIQGGY 230
>gi|222625756|gb|EEE59888.1| hypothetical protein OsJ_12490 [Oryza sativa Japonica Group]
Length = 867
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 144/208 (69%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ I+ + + +LK A+L H SR +S SS+ EE G E +VA
Sbjct: 663 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSR---SMSVSSAQIEESGFETATVA 719
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L +KG GSWL C +DD+V DAVK+M QHN+G+LVV+KPG+ + IAGI TERDYLR
Sbjct: 720 DILKSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLR 779
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+EN+LIT+ D +L AMQLMT+K IRH+PVIDG +VGM+
Sbjct: 780 KIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMV 839
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI D+VRAVV + + EL RLN +I+G Y
Sbjct: 840 SIGDIVRAVVSEHREELNRLNAYIQGGY 867
>gi|388511535|gb|AFK43829.1| unknown [Lotus japonicus]
Length = 205
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 147/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + + ++K A+L+ Q R V K + F S S + EE G E+ ++A
Sbjct: 1 MQGGMRAIFSRGNVIKNAVLQ--QVRMVNPLLKPVA-FSRYESVSPARIEEHGFESTTIA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C ++DTV +AVK+M Q+N+G+LVV+KP E++ IAGI TERDYLR
Sbjct: 58 DILKAKGKGADGSWLWCTTEDTVYEAVKSMTQNNVGALVVVKPAEEKSIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVIDG+ ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTRVLRAMQLMTDNRIRHIPVIDGKGMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN FI+G Y
Sbjct: 178 SIGDVVRAVVSEHRQELDRLNAFIQGGY 205
>gi|118162023|gb|ABK64186.1| CBS domain-containing protein [Solenostemon scutellarioides]
Length = 202
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 146/208 (70%), Gaps = 7/208 (3%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG I+ + + K A+L+H + VV F S+S++ EE G E+ +++
Sbjct: 1 MQGGIQAIFSRG---KNAVLQHVR---VVPPAMRALMFPRHESTSAARMEEHGFESTTIS 54
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL KG GSWL C +DD+V DAVK+M QHN+G+LVV+KPGEQ+ IAGI TERDYLR
Sbjct: 55 DVLTAKGKGADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLR 114
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PV++ G ++GM+
Sbjct: 115 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDNRIRHIPVVNEGGMIGMV 174
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 175 SIGDVVRAVVREHREELNRLNAYIQGGY 202
>gi|255570875|ref|XP_002526389.1| conserved hypothetical protein [Ricinus communis]
gi|223534251|gb|EEF35965.1| conserved hypothetical protein [Ricinus communis]
Length = 206
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 138/195 (70%), Gaps = 3/195 (1%)
Query: 14 ILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVAEVLMTKGDDKVGS 73
++K A+L+H R V F S SS+ EE+ E+ ++A+VL KG GS
Sbjct: 14 LIKNAVLQH--ARVVANPGLRPIVFSRFESVSSARMEEQSFESTTIADVLKGKGKSADGS 71
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
WL C ++DTV DAVK+M HN+G+LVV+KPGEQ+ IAGI TERDYLRKI+ QGRS K T+
Sbjct: 72 WLWCTTEDTVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTK 131
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQ 192
V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVI D +VGM+SI DVVRAVV +
Sbjct: 132 VGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKDMVGMLSIGDVVRAVVAEH 191
Query: 193 KGELKRLNEFIRGEY 207
+ EL+RLN +I+G Y
Sbjct: 192 REELERLNAYIQGGY 206
>gi|449444316|ref|XP_004139921.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 1 [Cucumis sativus]
gi|449444318|ref|XP_004139922.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 2 [Cucumis sativus]
Length = 206
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 142/208 (68%), Gaps = 3/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + ++K A+L+ + SRF S+SS+ EE G E+ ++
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFST--SASSANIEEHGFESTTID 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C ++D+V DAV++M QHN+G+LVV+KP EQ IAGI TERDYLR
Sbjct: 59 DILKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLR 118
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVID + + GM+
Sbjct: 119 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMTDNRIRHIPVIDEKGMKGMV 178
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 179 SIGDVVRAVVSEHREELDRLNAYIQGGY 206
>gi|449475831|ref|XP_004154564.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSX3, mitochondrial-like [Cucumis sativus]
Length = 206
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 142/208 (68%), Gaps = 3/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + ++K A+L+ + SRF S+SS+ EE G E+ ++
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFST--SASSANIEEHGFESXTID 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C ++D+V DAV++M QHN+G+LVV+KP EQ IAGI TERDYLR
Sbjct: 59 DILKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLR 118
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVID + + GM+
Sbjct: 119 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLLAMQLMTDNRIRHIPVIDEKGMKGMV 178
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 179 SIGDVVRAVVSEHREELDRLNAYIQGGY 206
>gi|357491617|ref|XP_003616096.1| Cbs domain protein [Medicago truncatula]
gi|355517431|gb|AES99054.1| Cbs domain protein [Medicago truncatula]
Length = 242
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 146/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + ++K A+L+ + + SRF S++ + EE G E+ +++
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFE---SATPARIEEHGFESTTIS 94
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M Q+N+G+LVV+KPGE++ IAGI TERDYLR
Sbjct: 95 DILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLR 154
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVI+ + ++GM+
Sbjct: 155 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMV 214
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 215 SIGDVVRAVVGEHRQELDRLNAYIQGGY 242
>gi|357491619|ref|XP_003616097.1| Cbs domain protein [Medicago truncatula]
gi|355517432|gb|AES99055.1| Cbs domain protein [Medicago truncatula]
Length = 254
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 146/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + ++K A+L+ + + SRF S++ + EE G E+ +++
Sbjct: 50 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFE---SATPARIEEHGFESTTIS 106
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M Q+N+G+LVV+KPGE++ IAGI TERDYLR
Sbjct: 107 DILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLR 166
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVI+ + ++GM+
Sbjct: 167 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMV 226
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 227 SIGDVVRAVVGEHRQELDRLNAYIQGGY 254
>gi|357491615|ref|XP_003616095.1| Cbs domain protein [Medicago truncatula]
gi|217073214|gb|ACJ84966.1| unknown [Medicago truncatula]
gi|355517430|gb|AES99053.1| Cbs domain protein [Medicago truncatula]
gi|388522955|gb|AFK49539.1| unknown [Medicago truncatula]
Length = 205
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 146/208 (70%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + ++K A+L+ + + SRF S++ + EE G E+ +++
Sbjct: 1 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFE---SATPARIEEHGFESTTIS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M Q+N+G+LVV+KPGE++ IAGI TERDYLR
Sbjct: 58 DILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVI+ + ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGMLGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + EL RLN +I+G Y
Sbjct: 178 SIGDVVRAVVGEHRQELDRLNAYIQGGY 205
>gi|47027028|gb|AAT08729.1| CBS1 [Hyacinthus orientalis]
Length = 203
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 138/195 (70%), Gaps = 4/195 (2%)
Query: 14 ILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVAEVLMTKGDDKVGS 73
+L+ A+L+H + V+ F S SS+ EE G E+ +V++VL +KG GS
Sbjct: 12 VLRRAVLQHVR---VINPAFRPVIFSRSESVSSARLEEHGFESTTVSDVLKSKGKSADGS 68
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
WL C +DD+V DAVK+M QHN+G+LVV+KPGE++ IAGI TERDYLRKI+ QGRS K T+
Sbjct: 69 WLWCTTDDSVYDAVKSMTQHNVGALVVVKPGEEKDIAGIITERDYLRKIIVQGRSSKSTK 128
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQ 192
V +IMT+ENKLIT+ +L AMQLMTD IRH+PVI D ++GM+SI DVVRAVV +
Sbjct: 129 VGDIMTEENKLITVTPGTKVLQAMQLMTDNRIRHIPVIGDKGMIGMVSIGDVVRAVVSEH 188
Query: 193 KGELKRLNEFIRGEY 207
+ EL RLN FI G Y
Sbjct: 189 REELDRLNAFIHGGY 203
>gi|167999412|ref|XP_001752411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696311|gb|EDQ82650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 145/208 (69%), Gaps = 1/208 (0%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG+++ V+ + L G +L+H + G +R+ + + EE G E+ +++
Sbjct: 1 MQGLVRLVQAQGKALPGIVLQHVRVGGSGFGSGFQTRWESGQAKAKEGLEEHGFESTTIS 60
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG + GSWL C DDTV DAVK+M +N+G+L+V+K G ++ +AGI TERDYLR
Sbjct: 61 DILKEKGRNADGSWLWCSVDDTVYDAVKSMTANNVGALLVVKSGTEKTLAGIITERDYLR 120
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AM+LMT+ IRH+PV++G+ + GM+
Sbjct: 121 KIIVQGRSSKTTKVGDIMTEENKLITVSPDTKVLRAMELMTNNRIRHIPVVEGKGMKGMV 180
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV++ + EL+RL+ FI+G Y
Sbjct: 181 SIGDVVRAVVDEHREELQRLSSFIQGGY 208
>gi|242053745|ref|XP_002456018.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
gi|241927993|gb|EES01138.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
Length = 205
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 13/213 (6%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVIS--SSSSPT---EEKGLE 55
MQG+ K +R L+ +L+H K + +IS S SPT GLE
Sbjct: 1 MQGITKALRLHGRQLRHTVLQHMN--------KGIFSWATLISRIQSESPTVIIPHMGLE 52
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
NI+V+E+L KG+ + G+ C + +V +AV++M HN+G+LVVLK G +AGI TE
Sbjct: 53 NITVSEILKAKGEAEAGAVYWCSTSHSVHEAVQHMTAHNVGALVVLKSGNMNQLAGIVTE 112
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI 175
RD+ RKI+ GR + TRV +IMT+E+KLIT+ S NIL AM++MTDKHIRHVPV D ++
Sbjct: 113 RDFSRKILLPGRPSEETRVEDIMTEEDKLITVSSHTNILRAMEVMTDKHIRHVPVFDEKV 172
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
VGMISI DVVRA+V+QQ E+K+L ++IRG+YY
Sbjct: 173 VGMISIGDVVRAIVDQQHQEVKQLKKYIRGDYY 205
>gi|302785239|ref|XP_002974391.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
gi|300157989|gb|EFJ24613.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
Length = 236
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 141/208 (67%), Gaps = 3/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ + +R + + IL+H + R R+ ++ SS EE G E+ ++
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLR-VAATNDRFQLPRWESSVAKPSS-LEEHGFESTTIE 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV +AV++M HN+G+L+V+K GE+ IAGI TERDYLR
Sbjct: 59 DILKAKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLR 118
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ +L AM+LMT+K IRH+PV+ D +++GM+
Sbjct: 119 KIIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVVKDKKMLGMV 178
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV++ + ELKRLN FI+G Y
Sbjct: 179 SIGDVVRAVVDEHREELKRLNSFIQGGY 206
>gi|351722175|ref|NP_001236211.1| uncharacterized protein LOC100527191 [Glycine max]
gi|255631750|gb|ACU16242.1| unknown [Glycine max]
Length = 205
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 141/208 (67%), Gaps = 4/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG + + +++ A+L+ + + SRF V + + EE G E+ +++
Sbjct: 1 MQGGFQSFLSHGNVIRNAVLQRVRMVNPLLQPIVSSRFESV---TPARIEEHGFESTTIS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M Q+N+G+LVV+K + IAGI TERDYLR
Sbjct: 58 DILNDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAIAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTDK IRH+PVID + +VGM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDKRIRHIPVIDEKGMVGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV + + E++RLN FI+ Y
Sbjct: 178 SIGDVVRAVVREHRQEVERLNAFIQRGY 205
>gi|302807987|ref|XP_002985688.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
gi|300146597|gb|EFJ13266.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
Length = 236
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 141/208 (67%), Gaps = 3/208 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ + +R + + IL+H + R R+ ++ SS EE G E+ ++
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLR-VAATNDRFQLPRWESSVAKPSS-LEEHGFESTTIE 58
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV +AV++M HN+G+L+V+K GE+ IAGI TERDYLR
Sbjct: 59 DILKGKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLR 118
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ +L AM+LMT+K IRH+PV+ D +++GM+
Sbjct: 119 KIIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVVKDKKMLGMV 178
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRGEY 207
SI DVVRAVV++ + ELKRLN FI+G Y
Sbjct: 179 SIGDVVRAVVDEHREELKRLNSFIQGGY 206
>gi|168007993|ref|XP_001756692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692288|gb|EDQ78646.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 141/210 (67%), Gaps = 5/210 (2%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQ--GRYVVEGRKTCSRFGCVISSSSSPTEEKGLENIS 58
M G+ + V+ + +L +L+H + G G +T G + S EE G E+ +
Sbjct: 1 MYGLSRLVQGQRSVLSRCVLQHVRVGGGAFSFGSQTRKETGQATTKES--LEEHGFESTT 58
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A++L KG GSWL C DDTV DAVK+M HN+G+L+V+K G ++ +AGI TERDY
Sbjct: 59 IADILKEKGQQADGSWLWCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDY 118
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
LRKI+ QGRS K T+V +IMT+ENKLIT+ D +L AM+LMTD IRH+PV+ + + G
Sbjct: 119 LRKIIVQGRSSKTTKVGDIMTEENKLITVKPDTKVLRAMELMTDNRIRHIPVVEESGMKG 178
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
M+SI DVVRAVV++ + EL+RLN FI+G Y
Sbjct: 179 MVSIGDVVRAVVDEHREELQRLNSFIQGGY 208
>gi|351727132|ref|NP_001237662.1| uncharacterized protein LOC100306364 [Glycine max]
gi|255628307|gb|ACU14498.1| unknown [Glycine max]
Length = 206
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + +++ A+L+ + + SRF V + + EE G E+ +++
Sbjct: 1 MQGGMRSFLSHGNVIRNAVLQRVRMVNPLLQTIASSRFESV---TPARIEEHGFESTTIS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M Q+N+G+LVV+K + I GI TERDYLR
Sbjct: 58 DILNDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAITGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMI 179
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMTD IRH+PVID + ++GM+
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDNRIRHIPVIDEKGMIGMV 177
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIR 204
SI DVVRAVV + + E++RLN FI+
Sbjct: 178 SIGDVVRAVVREHRQEVERLNAFIQ 202
>gi|115438763|ref|NP_001043661.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|55296012|dbj|BAD68903.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|55296028|dbj|BAD69439.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|113533192|dbj|BAF05575.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|125571300|gb|EAZ12815.1| hypothetical protein OsJ_02734 [Oryza sativa Japonica Group]
Length = 258
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 143/213 (67%), Gaps = 13/213 (6%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVIS--SSSSPT---EEKGLE 55
MQG+ K +R + LK +L+H K + +IS + SPT GLE
Sbjct: 54 MQGITKALRFHGKQLKLTVLQHMN--------KGIFSWATLISRIQTESPTVIIPHIGLE 105
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
NI V E+L KG+ K G+ C + V +A+K+M HN+G+LVVLK G+++ +AGI TE
Sbjct: 106 NIRVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTE 165
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI 175
RD+ RKI+ GR + TRV +IMT+E+KLIT+ S+ NIL AM+LMT++HIRHVPV D ++
Sbjct: 166 RDFARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMTERHIRHVPVFDEKV 225
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
VGMI+I DVV+ +V+QQ E+K+L ++IRG+YY
Sbjct: 226 VGMITIGDVVKTIVDQQHQEVKQLKKYIRGDYY 258
>gi|125526972|gb|EAY75086.1| hypothetical protein OsI_02980 [Oryza sativa Indica Group]
Length = 310
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 143/213 (67%), Gaps = 13/213 (6%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVIS--SSSSPT---EEKGLE 55
MQG+ K +R + LK +L+H K + +IS + SPT GLE
Sbjct: 106 MQGITKALRFHGKQLKLTVLQHMN--------KGIFSWATLISRIQTESPTVIIPHIGLE 157
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
NI V E+L KG+ K G+ C + V +A+K+M HN+G+LVVLK G+++ +AGI TE
Sbjct: 158 NIRVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTE 217
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI 175
RD+ RKI+ GR + TRV +IMT+E+KLIT+ S+ NIL AM+LMT++HIRHVPV D ++
Sbjct: 218 RDFARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMTERHIRHVPVFDEKV 277
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
VGMI+I DVV+ +V+QQ E+K+L ++IRG+YY
Sbjct: 278 VGMITIGDVVKTIVDQQHQEVKQLKKYIRGDYY 310
>gi|414881295|tpg|DAA58426.1| TPA: hypothetical protein ZEAMMB73_299878 [Zea mays]
Length = 236
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 140/213 (65%), Gaps = 11/213 (5%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVIS--SSSSPT---EEKGLE 55
MQG+ K +R L+ A+L+H + K + +IS S SP GLE
Sbjct: 30 MQGITKALRLHGRQLRHAVLQH------MNMNKGIFSWATLISRIQSESPAVIIPHMGLE 83
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
NI+V E+L KG+ + G+ C + V +AV++MA HN+G+LVVLK G+ +AGI TE
Sbjct: 84 NITVNEILRAKGEAEAGAVYWCSTAHLVHEAVQHMAAHNVGALVVLKSGDMNQLAGIVTE 143
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI 175
RD+ RKI+ GR + TRV +IMT+E+K+IT+ NIL AM++MTDK IRHVPV D ++
Sbjct: 144 RDFARKILLPGRPSQQTRVEDIMTEEDKVITVSGRTNILRAMEVMTDKRIRHVPVFDDKV 203
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
VGMISI DVVR +V+QQ E+K+L ++IRG+YY
Sbjct: 204 VGMISIGDVVRTIVDQQHQEVKQLKKYIRGDYY 236
>gi|149392803|gb|ABR26204.1| cbs domain protein [Oryza sativa Indica Group]
Length = 143
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Query: 66 KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ 125
+G GSWL C +DD+V DAVK+M QHN+G+LVV+KPG+ + IAGI TERDYLRKI+ Q
Sbjct: 1 RGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQ 60
Query: 126 GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDV 184
GRS K T+V +IMT+EN+LIT+ D +L AMQLMT+K IRH+PVIDG +VGM+SI D+
Sbjct: 61 GRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIGDI 120
Query: 185 VRAVVEQQKGELKRLNEFIRGEY 207
VRAVV + + EL RLN +I+G Y
Sbjct: 121 VRAVVSEHREELNRLNAYIQGGY 143
>gi|149392473|gb|ABR26039.1| cbs domain protein [Oryza sativa Indica Group]
Length = 141
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 111/137 (81%), Gaps = 1/137 (0%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
GSWL C +DD+V DAVK+M QHN+G+LVV+KPG+ + IAGI TERDYLRKI+ QGRS K
Sbjct: 5 GSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKS 64
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVE 190
T+V +IMT+EN+LIT+ D +L AMQLMT+K IRH+PVIDG +VGM+SI D+VRAVV
Sbjct: 65 TKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGMVGMVSIGDIVRAVVS 124
Query: 191 QQKGELKRLNEFIRGEY 207
+ + EL RLN +I+G Y
Sbjct: 125 EHREELNRLNAYIQGGY 141
>gi|357135643|ref|XP_003569418.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 138/213 (64%), Gaps = 13/213 (6%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVIS--SSSSPT---EEKGLE 55
MQG+ K + + L+ +L H K + +IS S SP GLE
Sbjct: 1 MQGIAKALSFHGKQLRVTVLRHMN--------KGIFSWATLISRIQSESPAVIIPHTGLE 52
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
NI+V E+L KG+ + G+ C + V +AVK+M N+G+LVVLK G+++ +AGI TE
Sbjct: 53 NITVREILKAKGEAEAGAVYWCSTSHLVHEAVKHMTARNVGALVVLKSGDEKKLAGIVTE 112
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI 175
RD+ RKI+ GR + TRV +IMT + KLIT+ S+ NIL AM+LMTD+HIRHVPV D ++
Sbjct: 113 RDFARKILLPGRPSEGTRVEDIMTQDGKLITVTSNTNILRAMELMTDEHIRHVPVFDEKV 172
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
VGMISI DVVRA+V+QQ E+K+L ++I G+YY
Sbjct: 173 VGMISIGDVVRAIVDQQHQEVKQLKKYITGDYY 205
>gi|53771902|gb|AAU93534.1| unknown protein [Zea mays]
gi|414872653|tpg|DAA51210.1| TPA: putative uncharacterized protein adh1F [Zea mays]
Length = 286
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 147/289 (50%), Gaps = 85/289 (29%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ ++ VR+ +LK A+L+H SRF +S SS+ E++G E +VA
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRF---MSVSSARLEDRGFETATVA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKN------------------------------- 89
+VL +KG GSWL C ++D+V DAVK+
Sbjct: 58 DVLKSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNF 117
Query: 90 --MAQHNIGSLVVLKPGEQQHIAGIFTERD------------------------------ 117
M QHN+G+LVV+KPG+ + IAGI TER
Sbjct: 118 LQMTQHNVGALVVVKPGQNKSIAGIVTERGDEQISVLLASNFWPVAVHHSTFGIKESQLF 177
Query: 118 ------------------YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQL 159
YLRKI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQL
Sbjct: 178 RALYSRYNRNCIKLKYTYYLRKIIVQGRSSKSTKVGDIMTEENKLITVNPDTKVLQAMQL 237
Query: 160 MTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
MT+ +RH+PVIDG ++GM+SI DVVRAVV + + EL RLN++I+G Y
Sbjct: 238 MTENRVRHIPVIDGTGMLGMVSIGDVVRAVVAEHREELNRLNDYIQGGY 286
>gi|357491621|ref|XP_003616098.1| Cbs domain protein [Medicago truncatula]
gi|355517433|gb|AES99056.1| Cbs domain protein [Medicago truncatula]
Length = 205
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 110/161 (68%), Gaps = 3/161 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + ++K A+L+ + + SRF S++ + EE G E+ +++
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFE---SATPARIEEHGFESTTIS 94
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L KG GSWL C +DDTV DAVK+M Q+N+G+LVV+KPGE++ IAGI TERDYLR
Sbjct: 95 DILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLR 154
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMT 161
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLMT
Sbjct: 155 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMT 195
>gi|346465295|gb|AEO32492.1| hypothetical protein [Amblyomma maculatum]
Length = 159
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG I+ +++ +L+ A+L H + V+ + F S SS+ EE G E+ +++
Sbjct: 1 MQGAIQAIQSHGNVLRHAVLRHVR---VLNPTMRPTIFSRSESVSSARLEEHGFESTTIS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+++ KG GSWL C ++DTV DAVK+M QHN+G+LVV+KP ++ +AGI TERDYLR
Sbjct: 58 DIMKLKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPDGEKSVAGIITERDYLR 117
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTD 162
KI+ QGRS K T+V +IMT+ENKLIT+ D +L AMQLM D
Sbjct: 118 KIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMID 159
>gi|302142508|emb|CBI19711.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 81/94 (86%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K+GSWL CR++DTV DA K+MA++NIGSLVVLKPGE +HIAGIFTERDY+RKI+ GRS
Sbjct: 51 KIGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRKIIAHGRSS 110
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDK 163
K T+V EIMTDENKL+T+ SD NIL AMQL+T K
Sbjct: 111 KDTKVGEIMTDENKLVTVSSDTNILQAMQLLTGK 144
>gi|51471864|gb|AAU04402.1| unknown [Citrus limon]
Length = 117
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
Query: 93 HNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDAN 152
HN+G+LVV+KPGEQ+ AGI TERDYLRKI+ QGRS K T+V +IMT+EN+LIT D
Sbjct: 1 HNVGALVVVKPGEQKSAAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENQLITASPDTK 60
Query: 153 ILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLNEF 202
+L AMQLM DK IRH+PVID + ++GM+SI DVVRAVV + + EL RLN
Sbjct: 61 VLRAMQLMIDKRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAL 111
>gi|210162090|gb|ACJ09643.1| putative CBS domain-containing protein [Cupressus sempervirens]
Length = 138
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 101/137 (73%), Gaps = 7/137 (5%)
Query: 55 ENISVAEVLMTKGDDKVGSWLCCRSDD-TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIF 113
E+ ++++VL K D GSWL C +DD +V DAVK+M QH++G+LVV+ EQ+ IAGI
Sbjct: 6 ESTTMSDVLTAKNAD--GSWLWCTTDDRSVYDAVKSMTQHDVGALVVVTQLEQKSIAGII 63
Query: 114 TERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDAN-ILHAMQLMTDKHIRHVPVID 172
T DYLR IV RS K T V +IMT+EN+LIT+ +D N +L+AMQLMTD IRH+PV++
Sbjct: 64 TA-DYLRIIVQ--RSSKSTTVGDIMTEENRLITVTADTNQVLNAMQLMTDNRIRHIPVVN 120
Query: 173 GRIVGMISIVDVVRAVV 189
++GM+SI DVV AVV
Sbjct: 121 DGMIGMLSIGDVVSAVV 137
>gi|307111947|gb|EFN60181.1| hypothetical protein CHLNCDRAFT_33710 [Chlorella variabilis]
Length = 218
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 18/175 (10%)
Query: 50 EEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPG----- 104
E G V +L K +D G+WL C +DD V DAV+ M N+GSL+V P
Sbjct: 45 ETVGWGTTRVEALLKAKAEDS-GAWLWCAADDFVIDAVRKMTHANVGSLLVFDPSKMHLV 103
Query: 105 ---EQQHIA--------GIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANI 153
+ +HI G+ TERDYL K+V +G+ T+V+EIMT +KL T+ ++
Sbjct: 104 RDKDSKHITNASKDAVVGLITERDYLTKVVVKGKQSSSTKVSEIMTPAHKLQTVTPKHSV 163
Query: 154 LHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
L M+LM +K+ RHVPV+D G + GM+SI DVV ++++ + E+ RLNE+I+G Y
Sbjct: 164 LDVMELMVEKNFRHVPVMDSGSMQGMVSIRDVVHTMLKEHRQEVDRLNEYIQGSY 218
>gi|168020527|ref|XP_001762794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685903|gb|EDQ72295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 122/199 (61%), Gaps = 14/199 (7%)
Query: 15 LKGAILEHHQ--GRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVAEVLMTKGDDKVG 72
L G++L+H + G + G +T G I + S E + E+ ++A+VL KG G
Sbjct: 54 LSGSVLQHVRVGGSALGFGIQTRRESGQ-IETRESLVEHR-FESTTIADVLKDKGQKADG 111
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR---KIVGQGRSP 129
SWL C +DTV DAVK+M +N+ +L+V+K G ++ +AGI TER ++ IV P
Sbjct: 112 SWLWCSVEDTVYDAVKSMTANNVEALLVVKSGTEKMLAGIITERGLVKLMEMIVLYYDDP 171
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ +NKLIT+ D +L AM+LMTD IRH+PV+ D ++ GM+SI DVVRAV
Sbjct: 172 Y------LLFMQNKLITVSPDTKVLRAMELMTDNRIRHIPVVEDKKMKGMVSIGDVVRAV 225
Query: 189 VEQQKGELKRLNEFIRGEY 207
+++ + EL+ LN +I+G Y
Sbjct: 226 LDEHREELQSLNSYIQGGY 244
>gi|452825148|gb|EME32146.1| IMP dehydrogenase [Galdieria sulphuraria]
Length = 263
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 9/155 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLK---PGEQQHIAGIFT 114
+V ++L KG+ + ++ D V DA+K M +N+GSLVV+ G GI T
Sbjct: 113 TVGDILKVKGE----KFYRIKTTDFVYDAIKKMVDNNVGSLVVIDVDGDGITGKPLGIVT 168
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--D 172
ERDYLRKIV GRS K T V +IMT N L+++ A++ M+LMT K IRH+PVI D
Sbjct: 169 ERDYLRKIVLLGRSSKTTYVKDIMTSANNLVSVSPSASLNDCMELMTQKRIRHIPVIDND 228
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
G + GM+SI D+V+ +VE+ + E K+LNE+I+G Y
Sbjct: 229 GNVKGMVSIGDIVKELVEEHRHEAKKLNEYIQGTY 263
>gi|384250881|gb|EIE24360.1| CBS-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 230
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 109/178 (61%), Gaps = 14/178 (7%)
Query: 42 ISSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVL 101
+ S SS ++G + +VL +K D G+WL C DD V DAVK M + N+GSL+V
Sbjct: 55 LGSDSSRVGKQGWGQTKIGQVLQSKHD--AGAWLWCSKDDLVIDAVKKMTKGNVGSLLVF 112
Query: 102 KP-----------GEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSD 150
P + GI TERDYL K+V + +S K V++IMTD++KL+T
Sbjct: 113 DPEKITIDQPIKEASGDAVVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDKSKLMTATPQ 172
Query: 151 ANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
+++ M+LMT+ + RHVPV+ +G+ +GM+SI DVV VVE+ K E+ RL+E+I+G Y
Sbjct: 173 QSVVDVMKLMTENNFRHVPVVHEGKYLGMVSIRDVVHVVVEEHKEEVGRLHEYIQGSY 230
>gi|255034048|ref|YP_003084669.1| putative signal transduction protein [Dyadobacter fermentans DSM
18053]
gi|254946804|gb|ACT91504.1| putative signal transduction protein with CBS domains [Dyadobacter
fermentans DSM 18053]
Length = 140
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 97/143 (67%), Gaps = 6/143 (4%)
Query: 67 GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG 126
G+ V + D+TV +A++ MA+ NIG+++VL+ E + GIF+ERDY RK++ QG
Sbjct: 2 GNKPVNAIWSVTQDNTVFEALELMAEKNIGAVLVLEDNE---LIGIFSERDYARKVILQG 58
Query: 127 RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
R+ K T + ++MT ++IT+ +DA I MQ+M+DKHIRH+PV DGR+VG+ISI D+V
Sbjct: 59 RASKDTLIRDVMT--ARVITVETDAKIEECMQIMSDKHIRHLPVNRDGRLVGIISINDIV 116
Query: 186 RAVVEQQKGELKRLNEFIRGEYY 208
A++ +QK + L +I G Y
Sbjct: 117 SAIIHEQKEHINTLESYISGSPY 139
>gi|255086147|ref|XP_002509040.1| predicted protein [Micromonas sp. RCC299]
gi|226524318|gb|ACO70298.1| predicted protein [Micromonas sp. RCC299]
Length = 158
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
Query: 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGI 112
GLE +V ++L+TK + G+WL C + +AV+ M + N+G+L++++ + +AG+
Sbjct: 1 GLEKYTVGDLLLTKSLEDRGTWLWCDENVPALEAVRTMTKANVGALLLVRGRWEDAVAGV 60
Query: 113 FTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID 172
TERDYLRK+V Q + T V IMTD+ +D +L A++ MT+ RH+PV++
Sbjct: 61 LTERDYLRKVVAQNKDASTTAVGTIMTDKKLYDVAQTDTPVLEALRRMTEGRHRHMPVVN 120
Query: 173 GR--IVGMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
+ GM+ I DV R VV+ + E+ RL +++ G Y
Sbjct: 121 ANRTMAGMLCIGDVTRMVVDAHRAEVLRLRDYLAGASY 158
>gi|338213210|ref|YP_004657265.1| signal transduction protein with CBS domains [Runella slithyformis
DSM 19594]
gi|336307031|gb|AEI50133.1| putative signal transduction protein with CBS domains [Runella
slithyformis DSM 19594]
Length = 146
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 93/142 (65%), Gaps = 6/142 (4%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
D + + TV DA+K MA NIG+++VL+ G+ +AGIF+ERDY RK + QGR
Sbjct: 9 DKTRNAIFSVTPETTVLDALKQMADKNIGAVLVLEEGK---LAGIFSERDYARKGILQGR 65
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVR 186
+ T + E+MT KLIT+ S+ + AM +M++KHIRH+PV+D G ++G+ISI DVV
Sbjct: 66 ASNQTLIKEVMT--AKLITVTSEQKLEEAMVIMSEKHIRHLPVVDEGELIGIISINDVVA 123
Query: 187 AVVEQQKGELKRLNEFIRGEYY 208
++++ QK ++ L +I G Y
Sbjct: 124 SIIKDQKARIESLESYISGNPY 145
>gi|291297328|ref|YP_003508726.1| putative signal transduction protein [Meiothermus ruber DSM 1279]
gi|290472287|gb|ADD29706.1| putative signal transduction protein with CBS domains [Meiothermus
ruber DSM 1279]
Length = 145
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 100/149 (67%), Gaps = 10/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L+ KG+ KV + + TV +A++ MA H++G+L+V+K + GIF+ERD
Sbjct: 4 TVRQLLLAKGN-KVHA---ISPEATVFEALERMAAHDVGALMVMK---DDQLVGIFSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI+ GR K TRV E+MT + LIT+ +A + M LMTD HIRH+PV+ DG++V
Sbjct: 57 YARKIILMGRISKDTRVGEVMTSD--LITVTPEATVADCMNLMTDHHIRHLPVLEDGKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV+A++ QQ+ + L +I G
Sbjct: 115 GVISIGDVVKAIITQQEFMIAELESYITG 143
>gi|333902040|ref|YP_004475913.1| signal transduction protein with CBS domains [Pseudomonas fulva
12-X]
gi|333117305|gb|AEF23819.1| putative signal transduction protein with CBS domains [Pseudomonas
fulva 12-X]
Length = 145
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 100/150 (66%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL +K + + D +V AVK MA+ IG+LVVL E + +AGI +ERD
Sbjct: 4 TVADVLKSK---PISNVYSVTPDSSVFAAVKLMAEKGIGALVVL---EGERLAGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y+RK+ Q RSP +V+EIMT K+IT+ + H M+LMT+ +RH+PV+ DGR+V
Sbjct: 58 YVRKVAVQERSPANLKVSEIMT--AKVITVSPGEDARHCMELMTNGRLRHLPVVEDGRLV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ ++ QQ+ ++ L ++IRGE
Sbjct: 116 GLLSIGDLVKDIISQQENLIQHLEQYIRGE 145
>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
DSM 74]
gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
linguale DSM 74]
Length = 145
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 90/140 (64%), Gaps = 6/140 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
++ + SD TV D +K MA+ NIG+L+V+ GE + GIF+ERDY RK++ + R
Sbjct: 11 RINALYSVSSDQTVLDGLKVMAEKNIGALLVVDNGE---LTGIFSERDYARKVILKDRHS 67
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
TR+A++MT +IT+ D ++ M +M+D+HIRH+PV+D G ++G+ISI D+V A+
Sbjct: 68 DDTRIADVMT--ANVITIGPDQSLEEGMVIMSDRHIRHLPVVDKGELIGIISINDIVTAI 125
Query: 189 VEQQKGELKRLNEFIRGEYY 208
+ QK + L +I G Y
Sbjct: 126 IRDQKTRIDSLESYISGSPY 145
>gi|291279824|ref|YP_003496659.1| signal transduction protein [Deferribacter desulfuricans SSM1]
gi|290754526|dbj|BAI80903.1| signal transduction protein [Deferribacter desulfuricans SSM1]
Length = 147
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 99/151 (65%), Gaps = 10/151 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L KG+ +D TV DA+K MA +NIGS++V+ + + GIFTERD
Sbjct: 4 TVKDILAKKGN----QIFTVSADSTVYDALKVMADNNIGSVLVM---DGDKMVGIFTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ +G+ K T + E+MT+ K+I++ +A + LMT+K IRH+PV+ DG+++
Sbjct: 57 YARKLILKGKYSKDTPIKEVMTE--KVISIKPEATTEACLALMTEKRIRHLPVMQDGKVI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
G+ISI DVV+ ++E ++ ++ L FI G+Y
Sbjct: 115 GLISIGDVVKQIIEDRESYIRDLERFITGDY 145
>gi|304312239|ref|YP_003811837.1| hypothetical protein HDN1F_26110 [gamma proteobacterium HdN1]
gi|301797972|emb|CBL46194.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 147
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 92/135 (68%), Gaps = 7/135 (5%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
+W + D V DA++ MA +G+LVV+ E++ ++GI TERDY RK+V RS
Sbjct: 16 TW-TVQPDTKVLDALQLMADKGVGALVVM---EKKRVSGIITERDYARKVVLMARSSHTA 71
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQ 191
V+EIM+D+ L+T+ D + M++MTD+ +RH+PV+D GR++G++SI DVV+ ++E+
Sbjct: 72 TVSEIMSDQ--LLTVDPDQTVEECMEIMTDQRVRHLPVMDEGRMIGIVSIGDVVKCMIEE 129
Query: 192 QKGELKRLNEFIRGE 206
Q L+ L ++IRGE
Sbjct: 130 QASTLQHLEQYIRGE 144
>gi|408674029|ref|YP_006873777.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
gi|387855653|gb|AFK03750.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
Length = 145
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 92/139 (66%), Gaps = 6/139 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K+ + S TV DA+ MA NIG+++V+ G+ ++GIF+ERDY RKIV +GR
Sbjct: 11 KINALFSVTSSTTVYDALVEMADKNIGAVLVIDEGK---LSGIFSERDYARKIVLKGRHS 67
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI-VGMISIVDVVRAV 188
T V+++MT +IT+ + + AMQ+M++KHIRH+PV++ I VG+ISI DVV ++
Sbjct: 68 DDTPVSDVMT--ANVITVEMEDKLEMAMQIMSEKHIRHLPVMENAILVGIISINDVVSSI 125
Query: 189 VEQQKGELKRLNEFIRGEY 207
+++QK ++ L +I G Y
Sbjct: 126 IQEQKSQIASLQGYISGNY 144
>gi|257091949|ref|YP_003165590.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044473|gb|ACV33661.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 143
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 93/139 (66%), Gaps = 7/139 (5%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK G + DD V A++ MA HN+G+++VL + + + GIF+ERDY RK++ G++
Sbjct: 10 DKSGPLVIVSPDDAVFHALQVMADHNVGAVLVL---DGKQLVGIFSERDYARKVILFGKA 66
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVR 186
K TRV EIMTD K++ + D + M +MT+KH RH+PV+ DGR+VG++SI DVV+
Sbjct: 67 SKDTRVREIMTD--KVLYVTPDRTVDECMAIMTEKHFRHLPVLDDDGRVVGIVSIGDVVK 124
Query: 187 AVVEQQKGELKRLNEFIRG 205
+ +Q+ ++++ ++I G
Sbjct: 125 ETICEQQFIIQQMEKYITG 143
>gi|325272356|ref|ZP_08138756.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
gi|324102516|gb|EGB99962.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
Length = 145
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 98/150 (65%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ NIG+L V+ E + + GI +ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNIGALPVV---EGKQVVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T V EIM+ ++T+ N+ + M LMTD+H+RH+PV+ +G ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPRQNLEYCMNLMTDRHLRHLPVVSNGELL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 116 GLLSIGDLVKETIAEQASLIKQLEQYIRGE 145
>gi|26986946|ref|NP_742371.1| hypothetical protein PP_0202 [Pseudomonas putida KT2440]
gi|395446551|ref|YP_006386804.1| CBS domain-containing protein [Pseudomonas putida ND6]
gi|24981558|gb|AAN65835.1|AE016212_1 CBS domain protein [Pseudomonas putida KT2440]
gi|388560548|gb|AFK69689.1| CBS domain-containing protein [Pseudomonas putida ND6]
Length = 145
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ NIG+L V++ G+ + GI +ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V +GRS T V EIM+ ++T+ + M LMTD+H+RH+PV+D GR++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPKQKLDFCMNLMTDRHLRHLPVVDNGRLL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ +++Q +K++ ++IRGE
Sbjct: 116 GLLSIGDLVKETIDEQASLIKQMEQYIRGE 145
>gi|422317676|ref|ZP_16398976.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
gi|317407797|gb|EFV87724.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
Length = 146
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 9/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VAE+L K + V + D +V DA+K MA+ +IG++VV + E + G+ TERDY
Sbjct: 4 VAEILREKANPAV---VTVSPDSSVYDAIKTMAERSIGAVVVAQGDE---VLGMLTERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
RKIV Q RS + T+V EIMTD + P D H M LMT++H RH+PVI D ++VG
Sbjct: 58 ARKIVLQDRSSRTTKVREIMTD-SVFYVRPEDTR-EHCMALMTERHFRHLPVIQDQKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGE 206
++SI D+V+ V+ +QK + L +I GE
Sbjct: 116 LVSIGDLVKDVMSEQKFIITELERYITGE 144
>gi|148545482|ref|YP_001265584.1| hypothetical protein Pput_0225 [Pseudomonas putida F1]
gi|397697387|ref|YP_006535270.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|421525151|ref|ZP_15971772.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
gi|148509540|gb|ABQ76400.1| CBS domain containing protein [Pseudomonas putida F1]
gi|397334117|gb|AFO50476.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|402751614|gb|EJX12127.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
Length = 145
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ NIG+L V++ G+ + GI +ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V +GRS T V EIM+ ++T+ + M LMTD+H+RH+PV+D GR++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVDPKQKLDFCMNLMTDRHLRHLPVVDNGRLL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ +++Q +K++ ++IRGE
Sbjct: 116 GLLSIGDLVKETIDEQASLIKQMEQYIRGE 145
>gi|409397204|ref|ZP_11248142.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
gi|409118364|gb|EKM94764.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
Length = 145
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 97/150 (64%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+V+ G + + +D+V DA+K MA+ N+G+L V + GI +ERD
Sbjct: 3 TVAQVI---GAKQTQGIVMIAPEDSVFDALKLMAEKNVGALPVADAS--GRLVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV QGRS T V+ IMT +K+IT+ +I M++MT+KH+RH+PV+D GR V
Sbjct: 58 YARKIVLQGRSSFVTPVSAIMT--SKVITVEPRQSIRECMEIMTEKHLRHLPVLDEGRTV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI DVV+ + +Q +++L ++IRGE
Sbjct: 116 GLLSIGDVVKETMAEQDNLIQQLEQYIRGE 145
>gi|397688746|ref|YP_006526065.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
gi|395810302|gb|AFN79707.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
Length = 144
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 97/150 (64%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K V + S+ TV + ++ MA+HN+G+L V+ GE + GI +ERD
Sbjct: 3 TVAQLLRDKQHQNVHT---ISSEATVLEFLQAMAEHNVGALPVVDDGE---LVGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV QGRS T V+ IM+ + +IT +I M LMTD+H+RH+PV+D GR+V
Sbjct: 57 YARKIVLQGRSSVGTPVSTIMS--SPVITTEPQQSIQACMSLMTDRHLRHLPVVDEGRLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L +IRGE
Sbjct: 115 GLLSIGDLVKEAIAEQADLIQQLERYIRGE 144
>gi|104779464|ref|YP_605962.1| hypothetical protein PSEEN0171 [Pseudomonas entomophila L48]
gi|95108451|emb|CAK13145.1| conserved hypothetical protein; CBS domain protein [Pseudomonas
entomophila L48]
Length = 145
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 90/128 (70%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
DD+V DA+K +A+ NIG+L V+ E + GI +ERDY RK+V +GRS +T V EIM+
Sbjct: 23 DDSVLDALKMLAEKNIGALPVV---ENDQVVGIVSERDYARKLVLKGRSSPFTTVREIMS 79
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ ++T+ N+ + M LMT++H+RH+PV+ +G+++G++SI D+V+ + +Q + +
Sbjct: 80 --SPVVTVDPKQNLEYCMNLMTNRHLRHLPVVENGKLLGLLSIGDLVKETIAEQANLILQ 137
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 138 LEQYIRGE 145
>gi|398848487|ref|ZP_10605300.1| CBS domain-containing protein [Pseudomonas sp. GM84]
gi|398248217|gb|EJN33640.1| CBS domain-containing protein [Pseudomonas sp. GM84]
Length = 145
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 98/150 (65%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V E+L TK + + DD+V DA+K +A+ N+G+L V+ E + GI +ERD
Sbjct: 3 NVEEILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNVGALPVV---ENNQVVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V +GRS T V EIM+ ++T+ N+ + M LMTD+H+RH+PV++ G ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPRQNLEYCMNLMTDRHLRHLPVVNHGELL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ +++Q +++L ++IRGE
Sbjct: 116 GLLSIGDLVKETIKEQASLIQQLEQYIRGE 145
>gi|386009867|ref|YP_005928144.1| hypothetical protein PPUBIRD1_0233 [Pseudomonas putida BIRD-1]
gi|313496573|gb|ADR57939.1| CBS domain-containing protein [Pseudomonas putida BIRD-1]
Length = 145
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 99/150 (66%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ N+G+L V++ G+ + GI +ERD
Sbjct: 3 NVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNVGALPVVEGGQ---VVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V +GRS T V EIM+ ++T+ + M LMTD+H+RH+PV+D GR++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPKQKLDFCMNLMTDRHLRHLPVVDNGRLL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ +++Q +K++ ++IRGE
Sbjct: 116 GLLSIGDLVKETIDEQASLIKQMEQYIRGE 145
>gi|256424385|ref|YP_003125038.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256039293|gb|ACU62837.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 146
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 10/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L KG + + DDTV DA+ + N+G+LVVL G+ + + GIF+ERD
Sbjct: 3 TVRDILRVKG----HAVYSVQPDDTVFDALSVLVDKNVGALVVL--GDNEKVLGIFSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--RI 175
Y R+++ +GR+ K T + EIMT+ T+ + +I M MTDKHIRH+PV D R+
Sbjct: 57 YARRVILKGRASKETLIREIMTEHP--FTVTEEDSIQDCMVKMTDKHIRHLPVTDDQLRL 114
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
VGMISI DVV+ V+++Q+ + L +I+G
Sbjct: 115 VGMISIGDVVKYVIDEQRYIIDNLEGYIKG 144
>gi|320449248|ref|YP_004201344.1| hypothetical protein TSC_c01460 [Thermus scotoductus SA-01]
gi|320149417|gb|ADW20795.1| CBS domain containing protein [Thermus scotoductus SA-01]
Length = 143
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 99/148 (66%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +VL+ KG G TV +A++ +A+H+IG+L+V+ E + + GIF+ER
Sbjct: 1 MTVRQVLLRKG----GGVYSVHPQATVLEALRKLAEHDIGALLVM---EGERLLGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
DY RK+V GR K TRV E+MT E +IT+ + + AM+LMT+ +RH+PV+ +GR+
Sbjct: 54 DYARKLVLLGRFSKGTRVEEVMTRE--VITVTPETTLQEAMRLMTEHRVRHLPVLEEGRV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI D V+A++ +Q+ ++ L+ ++
Sbjct: 112 VGVVSIGDAVKAIITEQEVLIEELSRYV 139
>gi|334131314|ref|ZP_08505079.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
gi|333443663|gb|EGK71625.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
Length = 143
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K G +D+TV A++ MA IG+++V G +AGIF+ERDY RK+V QG+
Sbjct: 11 KTGPVATVEADNTVVSALRVMANRGIGAVLVTDNGA---LAGIFSERDYARKVVLQGKDS 67
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
T V +IMT +KLI + D + AMQLM+DK IRH+PV+D G ++G++SI D+V+
Sbjct: 68 SSTPVRDIMT--SKLIHVTPDMTVDQAMQLMSDKRIRHLPVLDGAGSLIGVVSIGDLVKE 125
Query: 188 VVEQQKGELKRLNEFIRG 205
+E Q+ +K+L +I G
Sbjct: 126 TIEYQQYLIKQLESYIVG 143
>gi|387905594|ref|YP_006335932.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387580486|gb|AFJ89201.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 153
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 97/151 (64%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DAVK MA+ IG+L+V+ E IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKAD-FVYDAVKLMAEKGIGALLVM---EGDEIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS ++ M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQDRSSKATRVDEIMTSKVRYVE-PSQSSD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|134293948|ref|YP_001117684.1| signal-transduction protein [Burkholderia vietnamiensis G4]
gi|134137105|gb|ABO58219.1| putative signal-transduction protein with CBS domains [Burkholderia
vietnamiensis G4]
Length = 153
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 97/151 (64%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DAVK MA+ IG+L+V+ E IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKAD-FVYDAVKLMAEKGIGALLVM---EGDEIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS ++ M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQDRSSKATRVDEIMTSKVRYVE-PSQSSD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|319763071|ref|YP_004127008.1| CBS domain-containing protein [Alicycliphilus denitrificans BC]
gi|330825150|ref|YP_004388453.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|317117632|gb|ADV00121.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
gi|329310522|gb|AEB84937.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 145
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L +K D +V C DTV A++ MA+ +IG+L+V++ GEQ IAGIFTERD
Sbjct: 3 TVAEILKSKPDAQVH---CVAPSDTVLAALRLMAEKHIGALLVME-GEQ--IAGIFTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V GR+ T V E+MT + + A M LMT+ +RH+PV+D GR+V
Sbjct: 57 YARKVVLLGRASVDTPVREVMTRAVRFVHPSHSAE--QCMALMTENRLRHLPVVDEGRVV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+V++V+ +Q+ + + +I G
Sbjct: 115 GLVSIGDLVKSVISEQQFIITEMERYITG 143
>gi|330808646|ref|YP_004353108.1| hypothetical protein PSEBR_a1884 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696482|ref|ZP_17670972.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327376754|gb|AEA68104.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388003923|gb|EIK65250.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 99/150 (66%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D+K DD V A+ MA+ N+G+L+V+K E + GI +ERD
Sbjct: 3 TVAQLLRIK-DEKNQQVHTISPDDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T+V++IM + +IT+ N+ + +MT+KH+RH+PV+ DG++V
Sbjct: 59 YARKMVLRGRSSVGTKVSDIMV--SPVITIDPHQNVETCLSIMTEKHLRHLPVVEDGKLV 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQADLIKQLEQYIRGE 146
>gi|423013390|ref|ZP_17004111.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
gi|338783618|gb|EGP47981.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
Length = 130
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D +V DA+K MA+ +IG++VV E + G+ TERDY RKIV Q RS + T+V
Sbjct: 1 MTVTPDSSVYDAIKTMAERSIGAVVV---AEGDEVLGMLTERDYARKIVLQDRSSRTTKV 57
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQK 193
EIMTD + P D H M LMT++H RH+PVI D ++VG++SI D+V+ V+ +QK
Sbjct: 58 REIMTD-SVFYVRPEDTR-EHCMALMTERHFRHLPVIQDKKLVGLVSIGDLVKDVMSEQK 115
Query: 194 GELKRLNEFIRGEY 207
+ L +I GE+
Sbjct: 116 FIITELERYISGEH 129
>gi|359781111|ref|ZP_09284336.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
gi|359371171|gb|EHK71737.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
Length = 144
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K V + D V DA++ MA+ N+G+L V++ GE + GI +ERD
Sbjct: 3 TVAQLLALKTQQDVYT---IAPDAWVLDALRLMAEKNVGALPVMRDGE---LVGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+ QGRS T V+EIMT E +I LP + MQ+MTD H+RH+PV+ +G+++
Sbjct: 57 YARKVALQGRSSYATPVSEIMT-EAVIIVLPQQ-TVGDCMQMMTDHHLRHLPVMGNGKLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+A QQ ++ L +IRGE
Sbjct: 115 GLLSIGDLVKATTVQQAELIRHLEGYIRGE 144
>gi|169795727|ref|YP_001713520.1| hypothetical protein ABAYE1626 [Acinetobacter baumannii AYE]
gi|184158370|ref|YP_001846709.1| CBS domain-containing protein [Acinetobacter baumannii ACICU]
gi|213157580|ref|YP_002319625.1| hypothetical protein AB57_2273 [Acinetobacter baumannii AB0057]
gi|215483212|ref|YP_002325419.1| hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|260554789|ref|ZP_05827010.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301347585|ref|ZP_07228326.1| CBS domain pair family protein [Acinetobacter baumannii AB056]
gi|301513137|ref|ZP_07238374.1| CBS domain pair family protein [Acinetobacter baumannii AB058]
gi|301596680|ref|ZP_07241688.1| CBS domain pair family protein [Acinetobacter baumannii AB059]
gi|332850270|ref|ZP_08432618.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332871229|ref|ZP_08439798.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332873862|ref|ZP_08441802.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|384132476|ref|YP_005515088.1| hypothetical protein [Acinetobacter baumannii 1656-2]
gi|384143477|ref|YP_005526187.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385237804|ref|YP_005799143.1| hypothetical protein ABTW07_2260 [Acinetobacter baumannii
TCDC-AB0715]
gi|387123678|ref|YP_006289560.1| putative signal transduction protein [Acinetobacter baumannii
MDR-TJ]
gi|403675738|ref|ZP_10937877.1| hypothetical protein ANCT1_14062 [Acinetobacter sp. NCTC 10304]
gi|407933074|ref|YP_006848717.1| hypothetical protein M3Q_2396 [Acinetobacter baumannii TYTH-1]
gi|416151450|ref|ZP_11603652.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|417550058|ref|ZP_12201138.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|417553271|ref|ZP_12204341.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|417560669|ref|ZP_12211548.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|417567022|ref|ZP_12217894.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|417568545|ref|ZP_12219408.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|417574386|ref|ZP_12225240.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|417578300|ref|ZP_12229137.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|417871712|ref|ZP_12516640.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|417873690|ref|ZP_12518556.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|417878029|ref|ZP_12522666.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|417883458|ref|ZP_12527701.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|421200616|ref|ZP_15657776.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|421204154|ref|ZP_15661283.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|421457509|ref|ZP_15906846.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|421534437|ref|ZP_15980710.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|421621648|ref|ZP_16062563.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|421626779|ref|ZP_16067606.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|421629982|ref|ZP_16070697.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|421633694|ref|ZP_16074323.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|421643738|ref|ZP_16084230.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|421645868|ref|ZP_16086323.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|421650501|ref|ZP_16090877.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|421654013|ref|ZP_16094344.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|421658597|ref|ZP_16098830.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|421664494|ref|ZP_16104634.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|421675515|ref|ZP_16115436.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|421687808|ref|ZP_16127517.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|421691456|ref|ZP_16131115.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|421695902|ref|ZP_16135498.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|421698648|ref|ZP_16138189.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|421703849|ref|ZP_16143305.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|421707632|ref|ZP_16147023.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|421789595|ref|ZP_16225847.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|421794587|ref|ZP_16230685.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|421795557|ref|ZP_16231639.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|421801156|ref|ZP_16237118.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|421804535|ref|ZP_16240445.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|424052104|ref|ZP_17789636.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|424059666|ref|ZP_17797157.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|424063606|ref|ZP_17801091.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|425748682|ref|ZP_18866666.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425751818|ref|ZP_18869759.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|445405145|ref|ZP_21431122.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|445442922|ref|ZP_21442492.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|445461247|ref|ZP_21448660.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|445471252|ref|ZP_21452005.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|445475956|ref|ZP_21453589.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|445492523|ref|ZP_21460470.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|169148654|emb|CAM86520.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183209964|gb|ACC57362.1| CBS domain protein [Acinetobacter baumannii ACICU]
gi|193077532|gb|ABO12362.2| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
gi|213056740|gb|ACJ41642.1| CBS domain containing protein [Acinetobacter baumannii AB0057]
gi|213985702|gb|ACJ56001.1| CBS domain pair family protein [Acinetobacter baumannii AB307-0294]
gi|260411331|gb|EEX04628.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322508696|gb|ADX04150.1| CBS domain-containing protein [Acinetobacter baumannii 1656-2]
gi|323518303|gb|ADX92684.1| CBS domain-containing protein [Acinetobacter baumannii TCDC-AB0715]
gi|332730845|gb|EGJ62154.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332731638|gb|EGJ62922.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332737848|gb|EGJ68735.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|333363691|gb|EGK45705.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|342224689|gb|EGT89712.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|342230688|gb|EGT95516.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|342233896|gb|EGT98596.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|342235794|gb|EGU00359.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|347593970|gb|AEP06691.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385878170|gb|AFI95265.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Acinetobacter baumannii MDR-TJ]
gi|395523251|gb|EJG11340.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|395552694|gb|EJG18702.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|395554840|gb|EJG20842.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|395564217|gb|EJG25869.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|395568997|gb|EJG29667.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|398326314|gb|EJN42463.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|400207233|gb|EJO38204.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|400209954|gb|EJO40924.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|400388026|gb|EJP51099.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|400393530|gb|EJP60576.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|404562065|gb|EKA67289.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|404563513|gb|EKA68721.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|404563885|gb|EKA69079.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|404572438|gb|EKA77481.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|404664420|gb|EKB32407.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|404670404|gb|EKB38296.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|404674198|gb|EKB41958.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|407191399|gb|EKE62600.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|407191738|gb|EKE62928.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|407901655|gb|AFU38486.1| CBS domain-containing protein [Acinetobacter baumannii TYTH-1]
gi|408507399|gb|EKK09094.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|408510136|gb|EKK11799.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|408511863|gb|EKK13510.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|408517861|gb|EKK19396.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|408694766|gb|EKL40328.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|408697245|gb|EKL42760.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|408699331|gb|EKL44811.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|408706224|gb|EKL51548.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|408710031|gb|EKL55270.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|408712791|gb|EKL57974.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|409987642|gb|EKO43822.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|410382446|gb|EKP35000.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|410394205|gb|EKP46543.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|410398044|gb|EKP50271.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|410401507|gb|EKP53647.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|410405810|gb|EKP57844.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|410411906|gb|EKP63775.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|425490727|gb|EKU57022.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425499574|gb|EKU65606.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|444763044|gb|ELW87388.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|444763762|gb|ELW88098.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|444771741|gb|ELW95866.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|444771992|gb|ELW96116.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|444778500|gb|ELX02512.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|444781895|gb|ELX05806.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|452952329|gb|EME57763.1| hypothetical protein G347_08216 [Acinetobacter baumannii MSP4-16]
Length = 143
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+ MA+ IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQAI---FTISPEATVLEAITIMAEKGIGALVV---AEGEQVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RK+ RS T VAEIMT K+IT+ + + +QLMTD+H+RH+PV+D G++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|299769864|ref|YP_003731890.1| hypothetical protein AOLE_08130 [Acinetobacter oleivorans DR1]
gi|298699952|gb|ADI90517.1| CBS domain pair family protein [Acinetobacter oleivorans DR1]
Length = 143
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+K MA IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQDI---FTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RK+ RS T VAEIMT +K++T+ + + +QLMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKNLIEQLKQYISG 143
>gi|293607877|ref|ZP_06690180.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135033|ref|YP_004995683.1| hypothetical protein BDGL_001415 [Acinetobacter calcoaceticus
PHEA-2]
gi|427425971|ref|ZP_18916043.1| CBS domain protein [Acinetobacter baumannii WC-136]
gi|292828450|gb|EFF86812.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122478|gb|ADY82001.1| CBS domain protein [Acinetobacter calcoaceticus PHEA-2]
gi|425697303|gb|EKU66987.1| CBS domain protein [Acinetobacter baumannii WC-136]
Length = 143
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+K MA IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKAEQDI---FTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RK+ RS T VAEIMT +K++T+ + + +QLMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKNLIEQLKQYISG 143
>gi|417547111|ref|ZP_12198197.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|421667212|ref|ZP_16107287.1| CBS domain protein [Acinetobacter baumannii OIFC087]
gi|421671820|ref|ZP_16111788.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|400384999|gb|EJP43677.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|410381086|gb|EKP33659.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|410385558|gb|EKP38049.1| CBS domain protein [Acinetobacter baumannii OIFC087]
Length = 143
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+ MA+ IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQAI---FTISPEATVLEAITIMAEKGIGALVV---AEGEQVIGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RK+ RS T VAEIMT K+IT+ + + +QLMTD+H+RH+PV+D G++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|226952931|ref|ZP_03823395.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226836252|gb|EEH68635.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 143
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + V + TV +A+K MA +G+LVV E + + GIF+ERDY
Sbjct: 4 VAQVIKNKAEQSV---FTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RKI RS T VA+IMT +K+IT+ + + +QLMTD+H+RH+PV++ ++VG
Sbjct: 58 TRKIALMERSSNSTLVADIMT--SKVITVSLNNTVEECLQLMTDRHLRHLPVLENDKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E Q+ +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQRILIEQLQQYISG 143
>gi|107025989|ref|YP_623500.1| signal-transduction protein [Burkholderia cenocepacia AU 1054]
gi|116692826|ref|YP_838359.1| signal-transduction protein [Burkholderia cenocepacia HI2424]
gi|254250303|ref|ZP_04943623.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
gi|105895363|gb|ABF78527.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia AU 1054]
gi|116650826|gb|ABK11466.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia HI2424]
gi|124876804|gb|EAY66794.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
Length = 153
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + +SD V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKSD-LVYDAIKLMAEKGIGALLVV---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RKIV Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKIVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+VG+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|294650507|ref|ZP_06727866.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
gi|292823650|gb|EFF82494.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
Length = 143
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + S + TV +A+K MA +G+LVV E + + GIF+ERDY
Sbjct: 4 VAQVIKNKAEQ---SIFTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RKI RS T VA+IMT +K+IT+ + + +QLMTD+H+RH+PV++ ++VG
Sbjct: 58 TRKIALMERSSNSTLVADIMT--SKVITVSLNNTVEECLQLMTDRHLRHLPVLENDKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E Q+ +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQRILIEQLQQYISG 143
>gi|421808270|ref|ZP_16244121.1| CBS domain protein [Acinetobacter baumannii OIFC035]
gi|410415850|gb|EKP67631.1| CBS domain protein [Acinetobacter baumannii OIFC035]
Length = 143
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+ MA+ IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQAI---FTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RK+ RS T VAEIMT K+IT+ + + +QLMTD+H+RH+PV+D G++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|375146265|ref|YP_005008706.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361060311|gb|AEV99302.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 143
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 86/123 (69%), Gaps = 5/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V +A++ + N+GSLVVL+ E + GIFTERDY RK++ +GRS K TRV +IMT+
Sbjct: 23 SVYEALETLESKNLGSLVVLE--ECGKLDGIFTERDYARKVILKGRSSKETRVMDIMTES 80
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+T D I + MQLMTDKHIRH+PV+ D +VG+ISI D+V+ +++++ ++ L
Sbjct: 81 PVFVT--PDTKIDYCMQLMTDKHIRHLPVLDDNELVGLISIGDLVKHIIDRKDFIIQNLE 138
Query: 201 EFI 203
++I
Sbjct: 139 QYI 141
>gi|377813056|ref|YP_005042305.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
gi|357937860|gb|AET91418.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 146
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 9/151 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL +K D V + S V DA+K MA +IG+++V + E I GI TERD
Sbjct: 3 TVAQVLNSKPDQTVYTVAATAS---VFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V R+ K T V +IMT + + + D M LMTDK +RH+PVID G++V
Sbjct: 57 YARKVVLMDRASKQTPVRDIMTSQVRYVR--PDQTTDDCMALMTDKRMRHLPVIDDGKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
GMISI D+V+ ++ +Q+ +++L +IRGE+
Sbjct: 115 GMISIGDLVKNIISEQQFTIQQLEYYIRGEH 145
>gi|443471464|ref|ZP_21061531.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
gi|442901494|gb|ELS27360.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
Length = 144
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L K ++ S TV +A MA +IG+LVV++ GE + GI TERD
Sbjct: 3 TVAEILRAKSHTQLFS---VEPTTTVLEAALMMADKDIGALVVMQGGE---LVGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
++R++ RS T + EIMT N + P D+N + MQLMT+K++RH+PV+ DG++V
Sbjct: 57 FVRRVAALERSAYGTTIEEIMTS-NLFVVTPRDSN-QYCMQLMTEKNLRHLPVLQDGKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+VR + +Q+ ++ L ++IRG
Sbjct: 115 GLLSIRDLVRDITAEQESLIQHLEQYIRG 143
>gi|436836212|ref|YP_007321428.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
gi|384067625|emb|CCH00835.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
Length = 196
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 87/129 (67%), Gaps = 6/129 (4%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
+TV +A++ MA NIG+++VL G+ + GIF+ERDY RK + QGR+ K T + ++MT
Sbjct: 73 ETVYEALQLMAAKNIGAVLVLDGGD---LVGIFSERDYARKGILQGRASKDTLIRDVMT- 128
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRL 199
+ LIT+ + + AM M++KHIRH+PV++G R++G+ISI DVV A++ QK + L
Sbjct: 129 -SSLITIAPEQLLESAMLTMSEKHIRHLPVLEGERLIGIISINDVVNAIIHDQKARISSL 187
Query: 200 NEFIRGEYY 208
+I G Y
Sbjct: 188 ESYISGSSY 196
>gi|238007630|gb|ACR34850.1| unknown [Zea mays]
gi|414872654|tpg|DAA51211.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 150
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ ++ VR+ +LK A+L+H SRF +S SS+ E++G E +VA
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRF---MSVSSARLEDRGFETATVA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+VL +KG GSWL C ++D+V DAVK+M QHN+G+LVV+KPG+ + IAGI TER
Sbjct: 58 DVLKSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTER 113
>gi|389808996|ref|ZP_10205088.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
gi|388442270|gb|EIL98478.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
Length = 142
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V DA+K+MA+H IG+L+V++ GEQ + G+ +ERDY RK++ QGRS T V++IM+
Sbjct: 24 VLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQGRSSSQTAVSDIMS--G 78
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+T+ D ++ M+L TD +RH+PV+ DG++VG+ISI D+V+AV++ Q +++ L
Sbjct: 79 SPLTVSPDTDVFECMRLCTDSRVRHLPVVQDGKVVGVISIGDLVKAVIDAQAEQIEHLQR 138
Query: 202 FI 203
+I
Sbjct: 139 YI 140
>gi|352079994|ref|ZP_08951063.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|389797851|ref|ZP_10200888.1| signal transduction protein [Rhodanobacter sp. 116-2]
gi|351684703|gb|EHA67772.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|388446514|gb|EIM02543.1| signal transduction protein [Rhodanobacter sp. 116-2]
Length = 142
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V DA+K+MA+H IG+L+V++ GEQ + G+ +ERDY RK++ QGRS T V++IM+
Sbjct: 24 VLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQGRSSSQTAVSDIMS--G 78
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+T+ D ++ M+L TD IRH+PV+ DG++VG+ISI D+V+AV++ Q +++ L
Sbjct: 79 PPLTVSPDTDVFDCMRLCTDSRIRHLPVVHDGKVVGVISIGDLVKAVIDAQAEQIEHLQR 138
Query: 202 FI 203
+I
Sbjct: 139 YI 140
>gi|378951751|ref|YP_005209239.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|359761765|gb|AEV63844.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
Length = 146
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 99/150 (66%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D+K DD V A+ MA+ N+G+L+V+K + + GI +ERD
Sbjct: 3 TVAQLLRIK-DEKNQQVHTISPDDMVLQALMRMAEKNVGALLVVK---NEEVLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T+V++IM + +IT+ N+ + +MT+KH+RH+PV+ DG++V
Sbjct: 59 YARKMVLRGRSSVGTKVSDIMV--SPVITIDPHQNVETCLSIMTEKHLRHLPVVEDGKLV 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQADLIRQLEQYIRGE 146
>gi|121595155|ref|YP_987051.1| signal-transduction protein [Acidovorax sp. JS42]
gi|120607235|gb|ABM42975.1| putative signal-transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 145
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L TK D +V + DTV A++ MA IG+L+V+ E IAGIFTERD
Sbjct: 3 TVAEILRTKADGQVHA---VEPSDTVLTALRRMADKGIGALLVM---EGDQIAGIFTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V GRS T V+E+MT + + A M LMT+ +RH+PV++ GR+V
Sbjct: 57 YARKMVLLGRSSGDTPVSEVMTRAVRFVRPAQSAE--QCMALMTENRLRHLPVVEGGRVV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+V++V+ +Q+ ++++ +I G
Sbjct: 115 GLVSIGDLVKSVISEQQFIIEQMELYITG 143
>gi|206563771|ref|YP_002234534.1| hypothetical protein BCAM1926 [Burkholderia cenocepacia J2315]
gi|421867786|ref|ZP_16299439.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|444360972|ref|ZP_21162128.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444366723|ref|ZP_21166740.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|198039811|emb|CAR55785.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358072199|emb|CCE50317.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|443598832|gb|ELT67156.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|443604077|gb|ELT72039.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
Length = 153
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + +SD V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKSD-FVYDAIKLMAEKGIGALLVV---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+VG+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|431800237|ref|YP_007227140.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
gi|430791002|gb|AGA71197.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
Length = 145
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ N+G+L V+ E + GI +ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V +GRS T V EIM+ ++T+ + + M LMTD+H+RH+PV+D G+++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPKQKLDYCMNLMTDRHLRHLPVVDNGQLL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q + +L ++IRGE
Sbjct: 116 GLLSIGDLVKETIAEQASLILQLEQYIRGE 145
>gi|402568485|ref|YP_006617829.1| signal-transduction protein [Burkholderia cepacia GG4]
gi|402249682|gb|AFQ50135.1| putative signal-transduction protein [Burkholderia cepacia GG4]
Length = 153
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 97/151 (64%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DA+K MA+ IG+L+V+ + + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVAKAD-FVYDAIKLMAEKGIGALLVM---DGEDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+ DG+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLHDGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|169633658|ref|YP_001707394.1| hypothetical protein ABSDF2087 [Acinetobacter baumannii SDF]
gi|169152450|emb|CAP01415.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 143
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 92/147 (62%), Gaps = 9/147 (6%)
Query: 60 AEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYL 119
A+V+ K + + + TV +A+ MA+ IG+LVV E + + GI +ERDY
Sbjct: 5 AQVIKNKSEQAI---FTISPEATVLEAITIMAEKGIGALVV---AEGEQVVGILSERDYT 58
Query: 120 RKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGM 178
RK+ RS T VAEIMT K+IT+ + + +QLMTD+H+RH+PV+D G++VG
Sbjct: 59 RKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKLVGF 116
Query: 179 ISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 117 ISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|421530746|ref|ZP_15977211.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
gi|402211864|gb|EJT83296.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
Length = 145
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ N+G+L V+ E + GI +ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T V EIM+ ++T+ N+ + M LMT++H+RH+PV+ +G ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQNLEYCMNLMTNRHLRHLPVVSNGELL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q + +L ++IRGE
Sbjct: 116 GLLSIGDLVKETIAEQANLILKLEQYIRGE 145
>gi|115358872|ref|YP_776010.1| signal-transduction protein [Burkholderia ambifaria AMMD]
gi|115284160|gb|ABI89676.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria AMMD]
Length = 153
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DA+K MA+ IG+L+V+ E IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKTD-FVYDAIKLMAEKGIGALLVV---EGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|222111496|ref|YP_002553760.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221730940|gb|ACM33760.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 145
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L TK D +V + DTV A++ MA IG+L+V+ E IAGIFTERD
Sbjct: 3 TVAEILRTKADGQVHA---VEPSDTVLTALRRMADKGIGALLVM---EGDQIAGIFTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V GRS T V+E+MT + + A M LMT+ +RH+PV++ GR+V
Sbjct: 57 YARKMVLLGRSSGDTPVSEVMTRAVRFVRPTQSAE--QCMALMTENRLRHLPVVEAGRVV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+V++V+ +Q+ ++++ +I G
Sbjct: 115 GLVSIGDLVKSVISEQQFIIEQMELYITG 143
>gi|170737907|ref|YP_001779167.1| signal-transduction protein [Burkholderia cenocepacia MC0-3]
gi|169820095|gb|ACA94677.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia MC0-3]
Length = 153
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKTD-LVYDAIKLMAEKGIGALLVV---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RKIV Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKIVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+VG+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|425745537|ref|ZP_18863581.1| CBS domain protein [Acinetobacter baumannii WC-323]
gi|425488545|gb|EKU54880.1| CBS domain protein [Acinetobacter baumannii WC-323]
Length = 143
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 95/148 (64%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K V S + TV +A+K MA+ +G+LVV E + + GIF+ERDY
Sbjct: 4 VAQVIKNKA---VQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVVGIFSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RKI RS T VA+IMT +K+I++ + + +QLMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKIALMERSSNNTPVADIMT--SKVISVSLNHTVEECLQLMTDRHLRHLPVLDQEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A ++ Q+ +++L ++I G
Sbjct: 116 FISIGDLVKAAMDDQRILIEQLQQYISG 143
>gi|229589653|ref|YP_002871772.1| hypothetical protein PFLU2156 [Pseudomonas fluorescens SBW25]
gi|229361519|emb|CAY48395.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 146
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL +K D K + D TV +A+ M++ N+G+L V+K G + GI +ERD
Sbjct: 3 TVAQVLKSK-DQKNQEVHTIKHDHTVFEALVRMSEKNVGALPVIKEGV---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ +G S TRV E+M+ + +IT+ S + M +MTD H+RH+PV+ DG+++
Sbjct: 59 YARKLILKGLSSVTTRVDEVMS--SPVITVDSHKKVDECMNIMTDSHLRHLPVVEDGKLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIADQADLIKQLEQYIRGE 146
>gi|152986795|ref|YP_001345731.1| hypothetical protein PSPA7_0335 [Pseudomonas aeruginosa PA7]
gi|452877772|ref|ZP_21955028.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
gi|150961953|gb|ABR83978.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452185497|gb|EME12515.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
Length = 144
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 101/150 (67%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K + +V D+ V DA++ MA+ NIG+L+VL GE + G+ +ERD
Sbjct: 3 TVAQLLNAKQNQQV---YTIGPDEMVLDALRLMAEKNIGALLVLNHGE---VVGVVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V +GRS T ++ IM+ ++++ S ++ M LMTD+H+RH+PV++ GR++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMS--APVVSVDSKQSVDTCMNLMTDRHLRHLPVVEEGRLL 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+A + +Q +++L ++IRG+
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRGD 144
>gi|262279324|ref|ZP_06057109.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|424745055|ref|ZP_18173328.1| CBS domain protein [Acinetobacter baumannii WC-141]
gi|262259675|gb|EEY78408.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|422942373|gb|EKU37427.1| CBS domain protein [Acinetobacter baumannii WC-141]
Length = 143
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+K MA IG+LVV + + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQDI---FTISPEATVLEAIKIMADKGIGALVV---ADGEKVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RK+ RS T VAEIMT +K++T+ + + +QLMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--SKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKNLIEQLKQYISG 143
>gi|170700325|ref|ZP_02891337.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
gi|170134759|gb|EDT03075.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
Length = 153
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + + +D V DA+K MA+ IG+L+V+ E IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTK-NDFVYDAIKLMAEKGIGALLVV---EGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|170719459|ref|YP_001747147.1| hypothetical protein PputW619_0272 [Pseudomonas putida W619]
gi|169757462|gb|ACA70778.1| CBS domain containing protein [Pseudomonas putida W619]
Length = 145
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ N+G+L V+ E + GI +ERD
Sbjct: 3 NVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---ENNQVVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T V EIM+ ++T+ N+ + M LMT++H+RH+PV+ +G ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQNLEYCMNLMTNRHLRHLPVVSNGELL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q + +L ++IRGE
Sbjct: 116 GLLSIGDLVKETIAEQASLILQLEQYIRGE 145
>gi|239503946|ref|ZP_04663256.1| CBS domain pair family protein [Acinetobacter baumannii AB900]
gi|421677002|ref|ZP_16116896.1| CBS domain protein [Acinetobacter baumannii OIFC111]
gi|410393659|gb|EKP46011.1| CBS domain protein [Acinetobacter baumannii OIFC111]
Length = 143
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+ MA+ IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQAI---FTISPEATVLEAITIMAEKGIGALVV---AEGEQVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RK+ RS T VAEIMT K+IT+ + + ++LMTD+H+RH+PV+D G++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLRLMTDRHLRHLPVLDNGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|387792221|ref|YP_006257286.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655054|gb|AFD08110.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 144
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 10/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V +L KG+ + TV DA++ + + NIG+L+V+ + + GIFTERDY
Sbjct: 4 VRSILQLKGN----AVFTISPSHTVYDALELLVEKNIGALMVV---DNERFVGIFTERDY 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RK++ +GRS K T + EIMT +T+ D +I H M+LMT+K IRH+PV++ ++ G
Sbjct: 57 ARKVILKGRSSKETLIGEIMTSTPVSVTI--DDSIEHCMKLMTNKFIRHLPVVENDKLAG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGE 206
+ISI DVV+ ++++QK ++ L +I G+
Sbjct: 115 LISIGDVVKYIIDEQKFIIENLEHYISGQ 143
>gi|167031246|ref|YP_001666477.1| hypothetical protein PputGB1_0228 [Pseudomonas putida GB-1]
gi|166857734|gb|ABY96141.1| CBS domain containing protein [Pseudomonas putida GB-1]
Length = 145
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ N+G+L V+ E + GI +ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EGNQVVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V +GRS T V EIM+ ++T+ + M LMTD+H+RH+PV+D G+++
Sbjct: 58 YARKLVLKGRSSAATPVREIMS--APVVTVEPKQKLDFCMNLMTDRHLRHLPVVDNGKLL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q ++++ ++IRGE
Sbjct: 116 GLLSIGDLVKETIAEQASLIQQMEQYIRGE 145
>gi|297564581|ref|YP_003683553.1| putative signal transduction protein [Meiothermus silvanus DSM
9946]
gi|296849030|gb|ADH62045.1| putative signal transduction protein with CBS domains [Meiothermus
silvanus DSM 9946]
Length = 143
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 88/123 (71%), Gaps = 6/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A++ MAQH++G+L+VL+ G+ + GIF+ERDY RKI+ GR+ + T V E+MT +
Sbjct: 24 TVYEALERMAQHDVGALLVLEEGQ---LVGIFSERDYARKIILMGRASRDTPVHEVMTTD 80
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLN 200
L+T+ +A + M LMT IRH+PV++ GR+ G+ISI DVV+A++ +Q+ + +L
Sbjct: 81 --LVTVSPEATVGECMALMTQHRIRHLPVMEGGRLAGVISIGDVVKAIMTEQEFLIAQLQ 138
Query: 201 EFI 203
++I
Sbjct: 139 QYI 141
>gi|15595447|ref|NP_248941.1| hypothetical protein PA0250 [Pseudomonas aeruginosa PAO1]
gi|218888991|ref|YP_002437855.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|254237513|ref|ZP_04930836.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243349|ref|ZP_04936671.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|418583816|ref|ZP_13147884.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418594207|ref|ZP_13158019.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136594|ref|ZP_14644637.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|421151184|ref|ZP_15610809.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|421157237|ref|ZP_15616627.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|421168865|ref|ZP_15626921.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|421181478|ref|ZP_15638977.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|421514863|ref|ZP_15961549.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|424943371|ref|ZP_18359134.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|451983277|ref|ZP_21931569.1| CBS domain protein [Pseudomonas aeruginosa 18A]
gi|9946090|gb|AAG03639.1|AE004463_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126169444|gb|EAZ54955.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196727|gb|EAZ60790.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769214|emb|CAW24974.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|346059817|dbj|GAA19700.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|375044722|gb|EHS37315.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|375046794|gb|EHS39350.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|403250656|gb|EJY64069.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|404348591|gb|EJZ74928.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|404527814|gb|EKA37946.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|404528367|gb|EKA38468.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|404543595|gb|EKA52852.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|404550813|gb|EKA59529.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|451759075|emb|CCQ84092.1| CBS domain protein [Pseudomonas aeruginosa 18A]
Length = 144
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 102/150 (68%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K + +V +D+ V DA++ MA+ NIG+L+V+ GE + G+ +ERD
Sbjct: 3 TVAQLLNAKQNQQV---YTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T ++ IM+ ++++ S ++ M LMTD+H+RH+PV+ DG+++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMS--APVVSVDSKQSVDTCMNLMTDRHLRHLPVVEDGQLL 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+A + +Q +++L ++IRG+
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRGD 144
>gi|413964852|ref|ZP_11404078.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
gi|413927526|gb|EKS66815.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
Length = 146
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL +K D V + S V DA+K MA +IG+++V + E I GI TERD
Sbjct: 3 TVAQVLNSKPDQTVFTVPATAS---VFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V R K+T V +IMT + + D M LMTDK +RH+PVID GR++
Sbjct: 57 YARKVVLMDRVSKHTPVRDIMTSHVRYVR--PDQTTDDCMALMTDKRMRHLPVIDNGRLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
GMISI D+V+ ++ +Q+ +++L +IRGE+
Sbjct: 115 GMISIGDLVKNIMAEQQYTIQQLEYYIRGEH 145
>gi|49076464|gb|AAT49566.1| PA0250, partial [synthetic construct]
Length = 145
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 102/150 (68%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K + +V +D+ V DA++ MA+ NIG+L+V+ GE + G+ +ERD
Sbjct: 3 TVAQLLNAKQNQQV---YTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T ++ IM+ ++++ S ++ M LMTD+H+RH+PV+ DG+++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMS--APVVSVDSKQSVDTCMNLMTDRHLRHLPVVEDGQLL 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+A + +Q +++L ++IRG+
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRGD 144
>gi|66819969|ref|XP_643641.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
gi|60471523|gb|EAL69479.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
Length = 259
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 9/160 (5%)
Query: 48 PTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQ 107
TE + V +++ K + ++ + +S++T+ DA+K M H IG L+V+ +
Sbjct: 99 STEYFAFGDTQVGDIIKEKQEKQI---IYVKSNNTIYDAIKLMNNHGIGCLLVVSEVDGS 155
Query: 108 HIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRH 167
+ GIFTERDYL K+ G+S K T V + MT K++T+ S ++ AM+LMT+K RH
Sbjct: 156 -LVGIFTERDYLGKVALMGKSSKETLVQDAMT--TKVVTINSKVGVVEAMKLMTEKRFRH 212
Query: 168 VPVIDG---RIVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+PV+D ++G++SI D+++ + QK +K LN F+
Sbjct: 213 IPVVDEDCINVIGLVSITDLIKTLRTNQKETIKYLNNFLN 252
>gi|71906263|ref|YP_283850.1| CBS [Dechloromonas aromatica RCB]
gi|71845884|gb|AAZ45380.1| CBS protein [Dechloromonas aromatica RCB]
Length = 143
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
DTV A+ MAQH +G+L+VL GEQ + GIF+ERDY RKI+ QG++ K T V EIM+D
Sbjct: 22 DTVYHALTVMAQHEVGALLVLD-GEQ--LVGIFSERDYARKIILQGKTSKETLVREIMSD 78
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKGELKR 198
+T S + M LMT+K RH+PV+D G IVGMISI D+V+ + QK + +
Sbjct: 79 RVAYVTPGSTLD--ECMALMTEKRFRHLPVLDEQGGIVGMISIGDLVKETISDQKFLIAQ 136
Query: 199 LNEFIRG 205
L +I G
Sbjct: 137 LEHYIAG 143
>gi|78061876|ref|YP_371784.1| signal-transduction protein [Burkholderia sp. 383]
gi|77969761|gb|ABB11140.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. 383]
Length = 153
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQLLKAKPDSGRTIYTVTKTD-LVYDAIKLMAEKGIGALLVV---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+VG+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|406037632|ref|ZP_11044996.1| hypothetical protein AparD1_11924 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 143
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 95/148 (64%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K V S + TV +A+K MA +G+LVV E + + GIF+ERDY
Sbjct: 4 VAQVIKNKA---VQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RKI R+ + T V++IMT +K+I++ + + +QLMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKIALMERTSESTLVSDIMT--SKVISVSLNHTVEECLQLMTDRHLRHLPVLDQEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E Q+ +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQRILIEQLQQYISG 143
>gi|384440463|ref|YP_005655187.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291596|gb|AEV17113.1| CBS domain protein [Thermus sp. CCB_US3_UF1]
Length = 143
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 98/146 (67%), Gaps = 13/146 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +VL+ KG G + TV +A+K +AQH+IG+L+V+ E + + GIF+ER
Sbjct: 1 MTVRQVLLRKG----GEVYAISPEATVLEALKALAQHDIGALLVM---EGERLLGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
DY RK+V GR K TRVAE+MT + +TLP +A++ AM+LMT+ +RH+PV++G V
Sbjct: 54 DYARKLVLLGRFSKDTRVAEVMTPDP--LTLPPEADLAQAMRLMTEHRVRHLPVVEGGRV 111
Query: 177 GM-ISIVDVVRAVVEQQK---GELKR 198
ISI DVV+A++ +Q+ GEL R
Sbjct: 112 VGVISIGDVVKAIIGEQEVLIGELSR 137
>gi|260550350|ref|ZP_05824562.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425740420|ref|ZP_18858592.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|445433303|ref|ZP_21439661.1| CBS domain protein [Acinetobacter baumannii OIFC021]
gi|260406662|gb|EEX00143.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425494813|gb|EKU61007.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|444757695|gb|ELW82212.1| CBS domain protein [Acinetobacter baumannii OIFC021]
Length = 143
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 92/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+ MA+ IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQAI---FTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RK+ RS T VAEIMT K+IT+ + + +QLMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKVTLMERSSYSTTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQKVLIEQLKQYISG 143
>gi|394986438|pdb|4FRY|A Chain A, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
gi|394986439|pdb|4FRY|B Chain B, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
Length = 157
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 7/154 (4%)
Query: 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGI 112
G + +VA++L K D + + +D V DA+K MA+ IG+L+V+ + IAGI
Sbjct: 3 GSMSTTVAQILKAKPDSGRTIYTVTK-NDFVYDAIKLMAEKGIGALLVV---DGDDIAGI 58
Query: 113 FTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID 172
TERDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D
Sbjct: 59 VTERDYARKVVLQERSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLD 116
Query: 173 -GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 117 GGKLIGLISIGDLVKSVIADQQFTISQLEHYIHG 150
>gi|171321846|ref|ZP_02910746.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
gi|171092865|gb|EDT38118.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
Length = 153
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKTD-FVYDAIKLMAEKGIGALLVV---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|404400937|ref|ZP_10992521.1| hypothetical protein PfusU_14281 [Pseudomonas fuscovaginae UPB0736]
Length = 147
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 97/150 (64%), Gaps = 6/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L KG + + R+D TV +A+ MA+ N+G+L V+ E+ + GI +ERD
Sbjct: 3 TVAELLKLKGSQRQEVY-TVRNDHTVFEALIKMAEKNVGALPVVD--ERGLVVGIISERD 59
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ G S T+V EIM +IT+ S + M +MTD+H+RH+PV+ +G+++
Sbjct: 60 YARKVILHGLSSVKTKVCEIMN--APVITVDSHQKVETCMAIMTDRHLRHLPVVENGQLI 117
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 118 GLLSIGDLVKEAIAEQASLIQQLEQYIRGE 147
>gi|254254274|ref|ZP_04947591.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
gi|124898919|gb|EAY70762.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
Length = 153
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + R D V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIY-SVRKTDLVYDAIKLMAEKGIGALLVM---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS + TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQERSSRATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDNGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
ubonensis Bu]
Length = 153
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K + + R D V DA+K MA+ IG+L+V+ + I+GI TE
Sbjct: 2 STTVAQILKAKPESGRTVY-TVRKTDLVYDAIKLMAEKGIGALLVM---DGDDISGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RDY RKIV Q RS K TRV EIMT + + + PS ++ M LMT+ +RH+PV+ DG+
Sbjct: 58 RDYARKIVLQDRSSKATRVEEIMTSKVRYVE-PSQSSD-ECMALMTEHRMRHLPVLDDGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|107099239|ref|ZP_01363157.1| hypothetical protein PaerPA_01000250 [Pseudomonas aeruginosa PACS2]
gi|116053963|ref|YP_788401.1| hypothetical protein PA14_03090 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296386735|ref|ZP_06876234.1| CBS domain-containing protein [Pseudomonas aeruginosa PAb1]
gi|313112175|ref|ZP_07797954.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|355646413|ref|ZP_09054412.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|386056315|ref|YP_005972837.1| putative CBS domain-containing protein [Pseudomonas aeruginosa M18]
gi|386063229|ref|YP_005978533.1| hypothetical protein NCGM2_0256 [Pseudomonas aeruginosa NCGM2.S1]
gi|392981658|ref|YP_006480245.1| hypothetical protein PADK2_01240 [Pseudomonas aeruginosa DK2]
gi|416864807|ref|ZP_11915531.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|416882033|ref|ZP_11921757.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|419756542|ref|ZP_14282890.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|421171943|ref|ZP_15629730.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|115589184|gb|ABJ15199.1| putative CBS domain [Pseudomonas aeruginosa UCBPP-PA14]
gi|310884456|gb|EFQ43050.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|334834902|gb|EGM13819.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|334835425|gb|EGM14301.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|347302621|gb|AEO72735.1| putative CBS domain protein [Pseudomonas aeruginosa M18]
gi|348031788|dbj|BAK87148.1| CBS domain-containing protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828553|gb|EHF12671.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|384397074|gb|EIE43489.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317163|gb|AFM62543.1| CBS domain-containing protein [Pseudomonas aeruginosa DK2]
gi|404538684|gb|EKA48207.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|453045303|gb|EME93023.1| hypothetical protein H123_17208 [Pseudomonas aeruginosa PA21_ST175]
Length = 144
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 101/150 (67%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K + +V D+ V DA++ MA+ NIG+L+V+ GE + G+ +ERD
Sbjct: 3 TVAQLLNAKQNQQV---YTIGPDEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T ++ IM+ ++++ S ++ M LMTD+H+RH+PV+ DG+++
Sbjct: 57 YARKMVLKGRSSIGTPISAIMS--APVVSVDSKQSVDTCMNLMTDRHLRHLPVVEDGQLL 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+A + +Q +++L ++IRG+
Sbjct: 115 GLLSIGDLVKAAIAEQAELIQQLEQYIRGD 144
>gi|416908508|ref|ZP_11931183.1| signal-transduction protein [Burkholderia sp. TJI49]
gi|325528776|gb|EGD05835.1| signal-transduction protein [Burkholderia sp. TJI49]
Length = 153
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDAGRTIYTVTKAD-LVYDAIKLMAEKGIGALLVV---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RDY RK+V Q RS K TRV EIMT + + + PS M LMT+ +RH+PV+ DG+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTAKVRYVE-PSQTTD-ECMALMTEHRMRHLPVLDDGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+VG+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LVGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|339485118|ref|YP_004699646.1| hypothetical protein PPS_0177 [Pseudomonas putida S16]
gi|338835961|gb|AEJ10766.1| CBS domain-containing protein [Pseudomonas putida S16]
Length = 145
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + + DD+V DA+K +A+ N+G+L V+ E + GI +ERD
Sbjct: 3 NVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNVGALPVV---EGNQVVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T V EIM+ ++T+ N+ + M LMT++H+RH+PV+ +G ++
Sbjct: 58 YARKLVLKGRSSAATPVREIMSA--PVVTVEPKQNLEYCMNLMTNRHLRHLPVVNNGELL 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q + +L ++IRGE
Sbjct: 116 GLLSIGDLVKETIAEQASLILQLEQYIRGE 145
>gi|380513462|ref|ZP_09856869.1| signal-transduction protein with cbs domains [Xanthomonas sacchari
NCPPB 4393]
Length = 142
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 100/150 (66%), Gaps = 14/150 (9%)
Query: 58 SVAEVLMTKGDD--KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+V +VL KG++ VG D V +A++ MA IG+++V++ G+ ++GI +E
Sbjct: 3 TVRQVLNEKGNEIHAVGP------DTAVIEALRLMAAKGIGAVLVMQDGQ---LSGILSE 53
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS T V +IM+ +K+ T+ ++ M+LMT + IRH+PV+D GR
Sbjct: 54 RDYARKVVLQDRSSATTPVRDIMS--SKVHTVDPAQSVQQCMELMTGQRIRHLPVVDAGR 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+ISI D+V+AV+E+Q+ EL +L E+IR
Sbjct: 112 VIGVISIGDLVKAVIEEQREELDQLQEYIR 141
>gi|172063607|ref|YP_001811258.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171996124|gb|ACB67042.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 153
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + + +D V DA+K MA+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTK-NDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLQERSSKATRVEEIMTAKVRYVE-PSQSTD-ECMALMTEHRMRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLISIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|423096128|ref|ZP_17083924.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887608|gb|EJL04091.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 129
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
DD V A+ MA+ N+G+L+V+K E + GI +ERDY RK+V GRS T+V++IM
Sbjct: 7 DDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERDYARKMVLHGRSSVGTKVSDIMV 63
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ +IT+ N+ + +MT+KH+RH+PV+ DG++VG++SI D+V+ + +Q +++
Sbjct: 64 --SPVITIDPHQNVETCLSIMTEKHLRHLPVVEDGKLVGLLSIGDLVKEAIAEQADLIRQ 121
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 122 LEQYIRGE 129
>gi|409097786|ref|ZP_11217810.1| hypothetical protein PagrP_05001 [Pedobacter agri PB92]
Length = 142
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 86/125 (68%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+K M NI +++V+K + ++GIFTERDY RKI+ QG+S K T + E+MT
Sbjct: 23 SVLDALKVMTDKNISAVLVMK---NEKLSGIFTERDYARKIILQGKSSKDTLINEVMTPN 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVP-VIDGRIVGMISIVDVVRAVVEQQKGELKRLN 200
ITL SD+ I + M+LMT+KHIRH+P V++ ++GM+SI D+V+ ++ QK + +L
Sbjct: 80 PITITL-SDS-IDYCMELMTEKHIRHLPIVVNEEVIGMLSIGDMVKFIIADQKQTITQLE 137
Query: 201 EFIRG 205
+I G
Sbjct: 138 SYISG 142
>gi|357416661|ref|YP_004929681.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
gi|355334239|gb|AER55640.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
Length = 136
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 87/135 (64%), Gaps = 6/135 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K + D V +AV+ M QH +G+++V++ Q + GI +ERDY RK+V RS
Sbjct: 5 KTAELVTVTPDQPVFEAVRKMDQHGVGAVLVMRG---QVLVGILSERDYARKVVLLERSS 61
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
+ TRV +IMT E ++T+ ++ H M++MT + RH+PV+ +GR++G++SI D+V+AV
Sbjct: 62 RSTRVEQIMTTE--VVTVEPQQSVAHCMEVMTRRRFRHLPVVMEGRVIGVVSIGDLVKAV 119
Query: 189 VEQQKGELKRLNEFI 203
+E Q+ +L L +I
Sbjct: 120 IEDQQADLDALQRYI 134
>gi|255319571|ref|ZP_05360784.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262379869|ref|ZP_06073025.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|421465283|ref|ZP_15913971.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
gi|255303369|gb|EET82573.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262299326|gb|EEY87239.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|400204545|gb|EJO35529.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
Length = 143
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V++VL K + + + TV +A+ MA IG+L+V ++Q + GI +ERD
Sbjct: 3 TVSQVLHNKTEKAI---FTISPEATVLEAISLMANKGIGALIV---TDEQRVVGILSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+ RS T V+EIMT NK++T+ + + +QLMTD+H+RH+PV+ D R+V
Sbjct: 57 YTRKVALMERSSYNTTVSEIMT--NKVLTVGLNNTVEDCLQLMTDRHLRHLPVLEDERLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+A +E Q+ + +L ++I G
Sbjct: 115 GLISIGDLVKAAMEDQRLMIDQLQQYISG 143
>gi|121604315|ref|YP_981644.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593284|gb|ABM36723.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 146
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +KG V + R DD+V DA+K MA IG+L+V+ E I GI TERD
Sbjct: 3 AVADILKSKGGAAVHT---IRPDDSVFDALKCMADKGIGALLVM---EGDAIVGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI +GR+ T+V ++MT + + P+ + M LMTD +RH+PV+ D R+V
Sbjct: 57 YARKIALKGRTSALTQVRDVMT-TSVMFVQPTQTS-EECMALMTDNRLRHLPVVQDNRLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G+ISI D+V+ ++ +QK +++L +I G+
Sbjct: 115 GLISIGDLVKDIISEQKFVIEQLEHYITGQ 144
>gi|149279021|ref|ZP_01885155.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
gi|149230300|gb|EDM35685.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
Length = 142
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 87/137 (63%), Gaps = 6/137 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K + +V DA+ M + NI +L++++ G+ + GIFTERDY RKI+ QG+S
Sbjct: 11 KSSQIFSVPASTSVLDALHVMMEKNISALLIMESGQ---LLGIFTERDYARKIILQGKSS 67
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAV 188
T +AE+MT + IT+ D +I M++MT+KHIRH+PV++ ++GM+SI DVV+ +
Sbjct: 68 ADTFLAEVMTGQP--ITISPDDHIEVCMEIMTNKHIRHLPVVNETGVIGMVSIGDVVKFI 125
Query: 189 VEQQKGELKRLNEFIRG 205
+E QK + +L +I
Sbjct: 126 IEDQKLTISQLESYISS 142
>gi|395803543|ref|ZP_10482789.1| signal-transduction protein [Flavobacterium sp. F52]
gi|395434355|gb|EJG00303.1| signal-transduction protein [Flavobacterium sp. F52]
Length = 141
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V ++L KG + + S+ TV DA+K M + NIG+++V+ + + GI +ER
Sbjct: 1 MTVDQILKAKGRNVYSIF----SNLTVYDALKVMGEKNIGAILVM---DDNVLKGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
DY RKIV + +S K T V EIM E+ + T+ N+ M+LM++K IRH+PV+ DG +
Sbjct: 54 DYARKIVLKDKSSKETFVHEIM--ESHVFTVKLSDNLEDCMELMSEKRIRHLPVLEDGNV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI DVV+A++E QK + LN +I
Sbjct: 112 VGVISISDVVKAIIEIQKDTINHLNSYI 139
>gi|410698094|gb|AFV77162.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus oshimai JL-2]
Length = 143
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 99/148 (66%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V ++L+ KG G+ R + TV +A+K +A+H++G+L+V+ E + GIF+ER
Sbjct: 1 MTVRQLLLRKG----GAVYRIRPEATVLEALKELARHDVGALLVM---EGDRLLGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
DY RK+V GR K T V E+MT EN IT+ + ++ AM+LMT+ +RH+PV++ GR+
Sbjct: 54 DYARKLVLLGRFSKDTLVREVMT-ENP-ITVTPETDLEEAMRLMTEHRVRHLPVLEGGRV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI D V+A++ +Q ++ L ++
Sbjct: 112 VGVVSIGDAVKAIITEQGVLIQELARYV 139
>gi|386359497|ref|YP_006057742.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383508524|gb|AFH37956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 143
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 98/148 (66%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +VL+ KG G + TV DA++ +A+H+IG+L+V+ E + GIFTER
Sbjct: 1 MTVRQVLVHKG----GGVHAIHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
DY RK+V GR K T+V E+MT + + T+ +A++ AM+LMT++ RH+PV++G R+
Sbjct: 54 DYARKLVLLGRFSKDTKVREVMTTD--VPTVAPEASLEEAMRLMTERRTRHLPVVEGERV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
+G++SI D+V+A++ Q + L+ ++
Sbjct: 112 MGVVSIGDLVKAIITHQGMLIAELSRYV 139
>gi|421857085|ref|ZP_16289440.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403187424|dbj|GAB75641.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 143
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V++VL K + + + TV +A+ MA IG+L++ ++Q + GI +ERD
Sbjct: 3 TVSQVLHNKTEKAI---FTISPEATVLEAISLMANKGIGALII---TDEQRVVGILSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+ RS T V+EIMT NK++T+ + + +QLMTD+H+RH+PV+ D R+V
Sbjct: 57 YTRKVALMERSSYNTTVSEIMT--NKVLTVGLNNTVEDCLQLMTDRHLRHLPVLEDERLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+A +E Q+ + +L ++I G
Sbjct: 115 GLISIGDLVKAAMEDQRLMIDQLQQYISG 143
>gi|289626325|ref|ZP_06459279.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583462|ref|ZP_16658586.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868293|gb|EGH03002.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 146
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L V+ E + G+ +ERDY RK++ +GRS T V EIM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVV---EGNVMVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
NK+IT+ S ++ M +MTD H+RH+PV+ DG+++G++SI D+V+ + +Q +++
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|421484626|ref|ZP_15932194.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
gi|400197121|gb|EJO30089.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
Length = 146
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 93/149 (62%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L K + V + D +V DA+K MA+ +IG++VV+ E + G+ +ERD
Sbjct: 3 TVAEILREKPNQSV---VTVSPDSSVYDAIKTMAERSIGAVVVV---EGDTVLGMLSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V Q RS + T+V +IMTD + P D H M +MT++H RH+PVID +++
Sbjct: 57 YARKVVLQDRSSRSTKVRDIMTDSVYYVG-PGDTR-EHCMAMMTERHFRHLPVIDNEKLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+V+ V+ +QK + L +I G
Sbjct: 115 GLLSIGDLVKDVMSEQKFIIHELERYISG 143
>gi|262372502|ref|ZP_06065781.1| CBS domain-containing protein [Acinetobacter junii SH205]
gi|262312527|gb|EEY93612.1| CBS domain-containing protein [Acinetobacter junii SH205]
Length = 143
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K V S + TV +A+K MA +G+LVV E + + GIF+ERDY
Sbjct: 4 VAQVIKNKA---VQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RKI RS T V++IMT +K+I++ + + + LMTD+H+RH+PV++ ++VG
Sbjct: 58 TRKIALMERSSNNTLVSDIMT--SKVISVSLNNTVEECLNLMTDRHLRHLPVLENEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E Q+ +++L ++I G
Sbjct: 116 FISIGDLVKAAMEDQRVLIEQLQQYISG 143
>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
21]
gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
[Sphingobacterium sp. 21]
Length = 142
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 87/139 (62%), Gaps = 6/139 (4%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
++K S + +D+V A++ M + NI +L+V+ G + GIFTERDY RKI+ +GR
Sbjct: 9 ENKAKSIVSVSPNDSVLGALRIMMEKNISALLVVDQGV---LLGIFTERDYARKIILKGR 65
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
+ T + E+MT T+ + +I H MQLMTD+H RH+P++ +G ++G+ISI D+V+
Sbjct: 66 ASANTAIHEVMTSNPH--TVGPNHSIDHCMQLMTDRHFRHLPIVENGNLIGIISIGDLVK 123
Query: 187 AVVEQQKGELKRLNEFIRG 205
++E QK + L +I
Sbjct: 124 YIIEDQKQTISHLESYINS 142
>gi|402758061|ref|ZP_10860317.1| hypothetical protein ANCT7_10176 [Acinetobacter sp. NCTC 7422]
Length = 143
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K V S + TV +A+K MA +G+LVV E + + GIF+ERDY
Sbjct: 4 VAQVIKNKA---VQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RKI RS T VA+IMT +K+I++ + + + LMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKIALMERSSNNTPVADIMT--SKVISVSLNHTVEECLNLMTDRHLRHLPVLDQEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A ++ Q+ +++L ++I G
Sbjct: 116 FISIGDLVKAAMDDQRILIEQLQQYISG 143
>gi|53717172|ref|YP_105966.1| hypothetical protein BMAA1350 [Burkholderia mallei ATCC 23344]
gi|53721906|ref|YP_110891.1| hypothetical protein BPSS0882 [Burkholderia pseudomallei K96243]
gi|67643288|ref|ZP_00442035.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76818563|ref|YP_337630.1| hypothetical protein BURPS1710b_A2480 [Burkholderia pseudomallei
1710b]
gi|121597823|ref|YP_989945.1| hypothetical protein BMASAVP1_0334 [Burkholderia mallei SAVP1]
gi|124381836|ref|YP_001024428.1| hypothetical protein BMA10229_0612 [Burkholderia mallei NCTC 10229]
gi|126443222|ref|YP_001062287.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
gi|126445993|ref|YP_001078149.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
gi|126457700|ref|YP_001075253.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
gi|134278834|ref|ZP_01765547.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167000166|ref|ZP_02265986.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167723227|ref|ZP_02406463.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167742198|ref|ZP_02414972.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167819373|ref|ZP_02451053.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167827746|ref|ZP_02459217.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167849220|ref|ZP_02474728.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167897818|ref|ZP_02485220.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167906163|ref|ZP_02493368.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167914486|ref|ZP_02501577.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167922385|ref|ZP_02509476.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217418559|ref|ZP_03450066.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226197756|ref|ZP_03793331.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237509954|ref|ZP_04522669.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242313105|ref|ZP_04812122.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254174393|ref|ZP_04881055.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254183336|ref|ZP_04889928.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254189969|ref|ZP_04896478.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254193127|ref|ZP_04899562.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254200811|ref|ZP_04907176.1| CBS domain protein [Burkholderia mallei FMH]
gi|254204781|ref|ZP_04911134.1| CBS domain protein [Burkholderia mallei JHU]
gi|254263370|ref|ZP_04954235.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254300236|ref|ZP_04967682.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254357030|ref|ZP_04973305.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386864670|ref|YP_006277618.1| hypothetical protein BP1026B_II0968 [Burkholderia pseudomallei
1026b]
gi|403522515|ref|YP_006658084.1| hypothetical protein BPC006_II1233 [Burkholderia pseudomallei
BPC006]
gi|418395944|ref|ZP_12969846.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418535801|ref|ZP_13101538.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418543432|ref|ZP_13108789.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418549968|ref|ZP_13114976.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418555654|ref|ZP_13120344.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52212320|emb|CAH38344.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52423142|gb|AAU46712.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76583036|gb|ABA52510.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121225621|gb|ABM49152.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124289856|gb|ABM99125.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126222713|gb|ABN86218.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126231468|gb|ABN94881.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126238847|gb|ABO01959.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134249253|gb|EBA49334.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147748423|gb|EDK55498.1| CBS domain protein [Burkholderia mallei FMH]
gi|147754367|gb|EDK61431.1| CBS domain protein [Burkholderia mallei JHU]
gi|148026057|gb|EDK84180.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157809884|gb|EDO87054.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157937646|gb|EDO93316.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160695439|gb|EDP85409.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169649881|gb|EDS82574.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184213869|gb|EDU10912.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217397863|gb|EEC37878.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225930365|gb|EEH26377.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|235002159|gb|EEP51583.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238524599|gb|EEP88031.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242136344|gb|EES22747.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243063818|gb|EES46004.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254214372|gb|EET03757.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385352840|gb|EIF59227.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385353208|gb|EIF59569.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385354522|gb|EIF60786.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385368339|gb|EIF73796.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385373249|gb|EIF78304.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385661798|gb|AFI69220.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403077582|gb|AFR19161.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 100/153 (65%), Gaps = 11/153 (7%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+++VA++L +K D + +SD +V +A+K MA+ +IG+L+V+ + +IAGI TE
Sbjct: 2 SLTVAQILRSKPDSGRTIHMVEKSD-SVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLI--TLPSDANILHAMQLMTDKHIRHVPVI-D 172
RDY RK+V RS K TRV EIMT + + + T SD M LMT+ +RH+PV+ D
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSD----ECMALMTEHRMRHLPVLDD 113
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++VG++SI D+V++V+ Q+ + +L +I G
Sbjct: 114 GKLVGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|421471493|ref|ZP_15919777.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|400225423|gb|EJO55591.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 153
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + ++D V DA+K M+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVTKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+ DG+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTTKVRYVE-PSQTSD-ECMALMTEHRMRHLPVLDDGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G++SI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLVSIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|297539691|ref|YP_003675460.1| putative signal transduction protein [Methylotenera versatilis 301]
gi|297259038|gb|ADI30883.1| putative signal transduction protein with CBS domains
[Methylotenera versatilis 301]
Length = 143
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 87/124 (70%), Gaps = 6/124 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V DA+ +A++ IG+LVVL + + G+F+ERDY R+I+ +G+S K T ++E+M+ N
Sbjct: 25 VFDALVVLAEYKIGALVVL---DGDKLVGVFSERDYAREIILKGKSSKTTPISEVMS-SN 80
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLNE 201
L P+D + AM +M+DKHIRH+PV++G +++GM+SI D+V+ +E Q+ +K+L
Sbjct: 81 VLTVKPNDT-VEQAMNIMSDKHIRHLPVLEGNKVIGMLSIGDLVKETIEYQQTLIKQLES 139
Query: 202 FIRG 205
+I G
Sbjct: 140 YITG 143
>gi|407364886|ref|ZP_11111418.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas mandelii JR-1]
Length = 146
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 86/127 (67%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D+ V +A+K MA+ N+G+L V+ G+ + G+ +ERDY RK+V QGRS T V +IM+
Sbjct: 24 DEMVLEALKLMAEKNVGALPVIDKGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ ++T PS +I M +MTD H+RH+PV+ DG ++G++SI D+V+ + +Q +++
Sbjct: 81 --SPVVTAPSQQSIERCMAVMTDSHLRHLPVVEDGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|182411839|ref|YP_001816905.1| signal-transduction protein [Opitutus terrae PB90-1]
gi|177839053|gb|ACB73305.1| putative signal-transduction protein with CBS domains [Opitutus
terrae PB90-1]
Length = 147
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 6/130 (4%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
S+ TV DAV M +H IGS+VVL E GIFTERD LR++VG+G PK T V ++M
Sbjct: 21 SNVTVCDAVNEMNRHRIGSIVVL---ENSSPIGIFTERDVLRRVVGEGVDPKRTPVNQVM 77
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRAVVEQQKGELK 197
T + IT+ + I M L +K+ RH+PV ++G++VG+ISI D+ R + + + E +
Sbjct: 78 TA--RPITITPETTIEQTMTLFAEKNCRHLPVLVNGKLVGLISIGDISRWMADTTRAEAE 135
Query: 198 RLNEFIRGEY 207
L +I G Y
Sbjct: 136 HLKNYIAGGY 145
>gi|406039484|ref|ZP_11046839.1| hypothetical protein AursD1_06641 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 143
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+V+ K + + + D TV +A+ MA+ IG+LVV + E + GI +ERD
Sbjct: 3 NVAQVIQDKAEQAIYT---VSPDATVLEAISIMAEKGIGALVVTQDNE---VVGILSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+ RS T V+EIMT K++T+ + +QLMTD+H+RH+PV+ + ++V
Sbjct: 57 YTRKVALMERSSYDTTVSEIMT--AKVLTISRSNTVEECLQLMTDRHLRHLPVVEENKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+A ++ QK + +L ++I G
Sbjct: 115 GLISIGDLVKAAMQDQKNLIDQLQQYISG 143
>gi|255533567|ref|YP_003093939.1| hypothetical protein Phep_3686 [Pedobacter heparinus DSM 2366]
gi|255346551|gb|ACU05877.1| CBS domain containing protein [Pedobacter heparinus DSM 2366]
Length = 142
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 10/147 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L TK + +V DA+K M + NI +L+VL + + + GIFTERD
Sbjct: 3 TVQQLLSTKS----AQIFSVTENSSVLDALKVMMEKNISALMVL---DGKRLVGIFTERD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI+ G+S T + E+MT + + LPSD I M +MTDKHIRH+PV+ + +++
Sbjct: 56 YARKIILHGKSSAETAIKEVMTAQ-PITVLPSDG-IDFCMGIMTDKHIRHLPVMQEQQLL 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
GM+SI DVV+ ++E QK + +L +I
Sbjct: 114 GMVSIGDVVKFIIEDQKQTISQLESYI 140
>gi|285018954|ref|YP_003376665.1| signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
gi|283474172|emb|CBA16673.1| putative signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
Length = 142
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V VL KG G D V +A++ MA IG+++V++ G H+AGI +ERD
Sbjct: 3 TVRHVLSEKG----GEIHAIAPDAAVIEALRLMADKGIGAVLVMQDG---HLAGILSERD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V Q RS T V +IM+D K+ T+ ++ M+LMT + IRH+PV++ G +V
Sbjct: 56 YARKVVLQERSSATTPVRDIMSD--KVHTVDPAQSVQQCMELMTGRRIRHLPVVEAGTVV 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G+ISI D+V+AV+E+Q+ EL +L +I
Sbjct: 114 GLISIGDLVKAVIEEQRQELDQLQRYI 140
>gi|388544286|ref|ZP_10147574.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
gi|388277469|gb|EIK97043.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
Length = 146
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 87/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A++ MA+ N+G+L V+K G + GI +ERDY RK+V GRS T V+EIM+
Sbjct: 24 DQMVVEALRLMAEKNVGALPVIKDGA---VVGIVSERDYARKVVLLGRSSVGTPVSEIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
K+IT+ NI M +MTD H+RH+PV++ G++VG++SI D+V+ + +Q +++
Sbjct: 81 --AKVITVDPHKNIDTCMNMMTDGHLRHLPVVEGGQLVGLLSIGDLVKEAIAEQADLIRQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|254000112|ref|YP_003052175.1| putative signal transduction protein [Methylovorus glucosetrophus
SIP3-4]
gi|313202072|ref|YP_004040730.1| signal transduction protein [Methylovorus sp. MP688]
gi|253986791|gb|ACT51648.1| putative signal transduction protein with CBS domains [Methylovorus
glucosetrophus SIP3-4]
gi|312441388|gb|ADQ85494.1| putative signal transduction protein with CBS domains [Methylovorus
sp. MP688]
Length = 142
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
++K + L D V DA+K MA++ +G+L+V++ Q + GIF+ERDY R++V +G+
Sbjct: 9 EEKGNTILSVGPDSLVYDALKIMAEYRVGALLVMRG---QALVGIFSERDYAREVVLKGK 65
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVR 186
+ K T V++IM+ +++IT+ D + M LM+ K IRH+PVI+ G++VG++SI D+V+
Sbjct: 66 TSKTTPVSDIMS--HQVITVSPDQTVDECMNLMSGKRIRHLPVIEHGQVVGVLSIGDLVK 123
Query: 187 AVVEQQKGELKRLNEFIR 204
A +E Q+ +++L +I+
Sbjct: 124 ATIEYQQFLIQQLESYIQ 141
>gi|311107598|ref|YP_003980451.1| hypothetical protein AXYL_04417 [Achromobacter xylosoxidans A8]
gi|310762287|gb|ADP17736.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans A8]
Length = 146
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 93/150 (62%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L K + V + D +V +AVK MA+ +IG++VV++ + G+ TERD
Sbjct: 3 TVAEILREKANHSV---VTVSPDASVFEAVKIMAERSIGAVVVVQGDA---VLGMLTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKIV Q RS + T+V +IMTD + H M +MT++H RH+PVI DG+++
Sbjct: 57 YARKIVLQDRSSRTTKVRDIMTDSVYYVGRADTRE--HCMAMMTERHFRHLPVIEDGKLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ V+ +QK + L +I GE
Sbjct: 115 GLLSIGDLVKDVMSEQKFIIHELERYITGE 144
>gi|83716568|ref|YP_439711.1| hypothetical protein BTH_II1515 [Burkholderia thailandensis E264]
gi|167578151|ref|ZP_02371025.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167616282|ref|ZP_02384917.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257142850|ref|ZP_05591112.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83650393|gb|ABC34457.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 153
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 100/153 (65%), Gaps = 11/153 (7%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+++VA++L +K D + +SD +V +A+K MA+ +IG+L+V+ + +IAGI TE
Sbjct: 2 SLTVAQILKSKPDSGRTIHMVEKSD-SVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLI--TLPSDANILHAMQLMTDKHIRHVPVI-D 172
RDY RK+V RS K TRV EIMT + + + T SD M LMT+ +RH+PV+ D
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSD----ECMALMTEHRMRHLPVLDD 113
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+++G++SI D+V++V+ Q+ + +L +I G
Sbjct: 114 GKLIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|91778432|ref|YP_553640.1| signal-transduction protein [Burkholderia xenovorans LB400]
gi|385204644|ref|ZP_10031514.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|91691092|gb|ABE34290.1| Signal-transduction protein containing CBS domains [Burkholderia
xenovorans LB400]
gi|385184535|gb|EIF33809.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 147
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA++L TK ++ + +DD+V DA+K MA+ IG+LVV + IAGI TERD
Sbjct: 3 SVAQLLKTKPNNT--TVFTVGADDSVYDAIKLMAEKGIGALVV---TDGDSIAGIVTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V RS K T V +IM+ + + D M LMT++ +RH+PVI+ R+V
Sbjct: 58 YARKVVLLDRSSKATPVRDIMSKAVRFVR--PDQTTDDCMALMTERRMRHLPVIENDRLV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 116 GMVSIGDLVKNIIAEQQFTIQQLEFYIHGE 145
>gi|422650577|ref|ZP_16713380.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330963663|gb|EGH63923.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 146
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ V DA++ MA NIG+L V++ G + G+ +ERDY RK+V +GRS T V+EIM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENGT---VVGVVSERDYARKVVLEGRSSVGTPVSEIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S + M +MTD H+RH+PV+ DG+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVNSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|28869810|ref|NP_792429.1| hypothetical protein PSPTO_2620 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969942|ref|ZP_03398075.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|301382215|ref|ZP_07230633.1| CBS domain protein [Pseudomonas syringae pv. tomato Max13]
gi|302061328|ref|ZP_07252869.1| CBS domain protein [Pseudomonas syringae pv. tomato K40]
gi|302134267|ref|ZP_07260257.1| CBS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656000|ref|ZP_16718448.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28853055|gb|AAO56124.1| CBS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925267|gb|EEB58829.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|331014472|gb|EGH94528.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 146
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ V DA++ MA NIG+L V++ G + G+ +ERDY RK+V +GRS T V+EIM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENGT---VVGVVSERDYARKVVLKGRSSVGTPVSEIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S + M +MTD H+RH+PV+ DG+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|422298489|ref|ZP_16386089.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
gi|422589447|ref|ZP_16664109.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330876235|gb|EGH10384.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|407989823|gb|EKG32058.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
Length = 146
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ V DA++ MA NIG+L V++ G + G+ +ERDY RK+V +GRS T V+EIM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENGT---VVGVVSERDYARKVVLKGRSSVGTPVSEIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S + M +MTD H+RH+PV+ DG+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVNSQQTVETCMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|146299410|ref|YP_001194001.1| signal-transduction protein [Flavobacterium johnsoniae UW101]
gi|146153828|gb|ABQ04682.1| putative signal-transduction protein with CBS domains
[Flavobacterium johnsoniae UW101]
Length = 141
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V ++L KG + RS TV +A+K M NIG+++++ + + GI +ER
Sbjct: 1 MTVDQILNAKGKN----VFSVRSTTTVYEALKVMGDKNIGAILIIDGTD---LKGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
DY RKIV + +S K T V EIM E+ + T+ NI M+LM+ K IRH+PV+ +G +
Sbjct: 54 DYARKIVLKDKSSKETFVHEIM--ESNVFTVQLSNNIDDCMELMSSKRIRHLPVLENGTV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI DVV+A++E QK + LN +I
Sbjct: 112 VGIISISDVVKAIIEIQKDTIHHLNSYI 139
>gi|161520491|ref|YP_001583918.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|189353318|ref|YP_001948945.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|421474512|ref|ZP_15922544.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160344541|gb|ABX17626.1| putative signal-transduction protein with CBS domains [Burkholderia
multivorans ATCC 17616]
gi|189337340|dbj|BAG46409.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|400232026|gb|EJO61674.1| CBS domain protein [Burkholderia multivorans CF2]
Length = 153
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA++L K D + + D V DA+K M+ IG+L+V+ + IAGI TE
Sbjct: 2 STTVAQILKAKPDSGRTIY-TVKKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RDY RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+ DG+
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTTKVRYVE-PSQTSD-ECMALMTEHRMRHLPVLDDGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G++SI D+V++V+ Q+ + +L +I G
Sbjct: 116 LIGLVSIGDLVKSVIADQQFTISQLEHYIHG 146
>gi|91776712|ref|YP_546468.1| signal-transduction protein [Methylobacillus flagellatus KT]
gi|91710699|gb|ABE50627.1| putative signal-transduction protein with CBS domains
[Methylobacillus flagellatus KT]
Length = 142
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V +VL TKG + + V DA+ MA+H+IG+LVV+ ++ + GIF+ERD
Sbjct: 3 TVRQVLETKG----STVYSVAPESLVYDALLLMAEHHIGALVVM---QRDKMVGIFSERD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y R++V +G++ K T V +IM+ +LIT+ D + H M LM+ K IRH+PV++G ++V
Sbjct: 56 YAREVVIKGKTSKTTTVGDIMS--VQLITVSPDDTVEHCMNLMSGKRIRHLPVLEGEKLV 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+V+ + Q+ +K+L +I+
Sbjct: 114 GLLSIGDLVKETIAYQEFLIKQLESYIQS 142
>gi|373954157|ref|ZP_09614117.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
gi|373890757|gb|EHQ26654.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
Length = 142
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ +V DA+ M + NI SL+++ E + + GIFTERDY RK+V GRS + T + EIMT
Sbjct: 21 ETSVYDALHMMMEKNISSLLIM---ENEVLKGIFTERDYARKLVLMGRSSRETPIGEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
L T+ I H M++M+ IRH+PVID R+ GM+SI DVV+ ++E QK +++
Sbjct: 78 A--NLFTITPSETIDHCMEMMSTYKIRHLPVIDNNRVTGMVSIGDVVKFIIEDQKRTIQQ 135
Query: 199 LNEFI 203
L +I
Sbjct: 136 LESYI 140
>gi|294053802|ref|YP_003547460.1| putative signal transduction protein [Coraliomargarita akajimensis
DSM 45221]
gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
[Coraliomargarita akajimensis DSM 45221]
Length = 151
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 92/155 (59%), Gaps = 9/155 (5%)
Query: 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIF 113
L +SV +L +K S C TV +AV M + IGS++V + + GIF
Sbjct: 3 LNKVSVVSIL----KEKSSSVHCVAEQVTVAEAVNEMNRQRIGSILV--KADDGTVTGIF 56
Query: 114 TERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID- 172
TERD L ++V GR P+ T+V E+MT + + ++ D ++ AMQLMT++ +RH+P++D
Sbjct: 57 TERDVLVRVVSAGRDPQATKVQEVMTPDFE--SIAPDTSVEDAMQLMTEQRVRHLPILDG 114
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
G + GMISI DV R +++ + E + L +++ EY
Sbjct: 115 GTLCGMISIGDVTRWLLQVNEMEAENLRKYVFAEY 149
>gi|359430476|ref|ZP_09221485.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
gi|358234116|dbj|GAB03024.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
Length = 143
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 95/148 (64%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K V S + TV +A+K MA+ +G+LVV E + + GIF+ERDY
Sbjct: 4 VAQVIKNKA---VQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVIGIFSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RKI RS T V++IMT +K+I++ + + +QLMTD+H+RH+PV++ ++VG
Sbjct: 58 TRKIALMERSSNNTPVSDIMT--SKVISVGLNHTVEECLQLMTDRHLRHLPVLEQEKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A ++ Q+ +++L ++I G
Sbjct: 116 FISIGDLVKAAMDDQRILIEQLQQYISG 143
>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 185
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 93/150 (62%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +K D V + V DA+K MA+ IG+LVV + G+ I GI TERD
Sbjct: 42 TVAQILKSKPDTTV---YTIDASALVYDAMKRMAEKQIGALVVTENGK---IVGIVTERD 95
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV RS K T V +IMT + + + P D+ M L+T+ +RH+PVID GR+V
Sbjct: 96 YARKIVLMDRSSKATAVRDIMTRDVRYVR-PEDSA-QGCMALVTEHRMRHLPVIDGGRLV 153
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GMISI D+V+ ++ Q +++L +IRGE
Sbjct: 154 GMISIGDLVKHIISDQAFTIQQLEFYIRGE 183
>gi|167572679|ref|ZP_02365553.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 97/153 (63%), Gaps = 11/153 (7%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+++VA +L +K D +SD +V +A+K MA+ +IG+L+V+ + IAGI TE
Sbjct: 2 SLTVAHILRSKPDSGRTIHTIEKSD-SVYNAIKLMAEKSIGALLVMDGAD---IAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLI--TLPSDANILHAMQLMTDKHIRHVPVI-D 172
RDY RK+V RS K TRV EIMT + + + T SD M LMT+ +RH+PV+ D
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSD----ECMALMTEHRMRHLPVLDD 113
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
GR++G++SI D+V++V+ Q+ + +L +I G
Sbjct: 114 GRLIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|126641980|ref|YP_001084964.1| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
Length = 112
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 79/117 (67%), Gaps = 6/117 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+LVV E + + GI +ERDY RK+ RS T VAEIMT K+IT+
Sbjct: 1 MAEKGIGALVV---AEGEQVVGILSERDYTRKVTLMERSSYSTTVAEIMT--AKVITVGL 55
Query: 150 DANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ + +QLMTD+H+RH+PV+D G++VG ISI D+V+A +E QK +++L ++I G
Sbjct: 56 NNTVEECLQLMTDRHLRHLPVLDNGKLVGFISIGDLVKAAMEDQKVLIEQLKQYISG 112
>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 154
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L K ++ V + D +V DA+K MA+ IG++VV++ GE + G+ +ERD
Sbjct: 11 TVAEILREKSNNAV---VTVSPDSSVFDAIKTMAERRIGAVVVVQ-GET--VLGMLSERD 64
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V Q RS + T+V +IMTD + P D H M +MT++H RH+PVI+ +++
Sbjct: 65 YARKVVLQDRSSRTTKVRDIMTDSVYYVG-PGDTR-EHCMAMMTERHFRHLPVIENEKLI 122
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+V+ ++ +QK + L +I G
Sbjct: 123 GLLSIGDLVKDIMSEQKFIIHELERYISG 151
>gi|187919677|ref|YP_001888708.1| signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
gi|187718115|gb|ACD19338.1| putative signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 147
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA++L TK ++ + +DD+V +A+K MA+ IG+LVV + IAGI TERD
Sbjct: 3 SVAQLLKTKPNNT--TVFTVGADDSVYEAIKLMAEKGIGALVV---TDGDSIAGIVTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V RS K T V +IM+ + + D M LMT++ +RH+PVI+ R+V
Sbjct: 58 YARKVVLMDRSSKATPVRDIMSKAVRFVR--PDQTTDDCMALMTERRMRHLPVIENDRLV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 116 GMVSIGDLVKNIIAEQQFTIQQLEFYIHGE 145
>gi|419954602|ref|ZP_14470738.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
gi|387968466|gb|EIK52755.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
Length = 145
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+V+ G + + +D+V +A+K M Q N+G+L V + GI +ERD
Sbjct: 3 TVAQVI---GAKQTQGIVTIAPEDSVFEALKVMEQKNVGALPVADAS--GRLVGIVSERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V GRS T+V+ IMT ++T+ +I M++MT+KH+RH+PV+D GR +
Sbjct: 58 YARKMVLLGRSSFVTQVSAIMT--RSVVTVEPRQSIRECMEIMTEKHLRHLPVLDEGRTI 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI DVV+ + +Q +++L ++IRGE
Sbjct: 116 GLLSIGDVVKETMAEQDSLIQQLEQYIRGE 145
>gi|388469324|ref|ZP_10143533.1| CBS domain protein [Pseudomonas synxantha BG33R]
gi|388006021|gb|EIK67287.1| CBS domain protein [Pseudomonas synxantha BG33R]
Length = 146
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D TV +A+ M++ N+G+L V+K G + GI +ERD
Sbjct: 3 TVAQLLKAK-DQKNQDVHTIQWDHTVFEALVRMSEKNVGALPVVKEGV---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ +G S TRV ++M+ + +IT+ + ++ M +MTD H+RH+PV+ DG ++
Sbjct: 59 YARKLILKGLSSVTTRVDDVMS--SPVITVDTHKSVEECMNIMTDSHLRHLPVVEDGELL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQADLIKQLEQYIRGE 146
>gi|221196034|ref|ZP_03569081.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221202708|ref|ZP_03575727.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221176642|gb|EEE09070.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221182588|gb|EEE14988.1| CBS domain protein [Burkholderia multivorans CGD2M]
Length = 149
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 7/148 (4%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A++L K D + ++D V DA+K M+ IG+L+V+ + IAGI TERDY
Sbjct: 1 MAQILKAKPDSGRTIYTVTKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERDY 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+ DG+++G
Sbjct: 57 ARKVVLQDRSSKATRVEEIMTTKVRYVE-PSQTSD-ECMALMTEHRMRHLPVLDDGKLIG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
++SI D+V++V+ Q+ + +L +I G
Sbjct: 115 LVSIGDLVKSVIADQQFTISQLEHYIHG 142
>gi|392967743|ref|ZP_10333159.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
gi|387842105|emb|CCH55213.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
Length = 145
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 87/139 (62%), Gaps = 6/139 (4%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
V + S+ TV +A++ MA NIG+++V+ G+ + GIF+ERDY RK + +GR
Sbjct: 12 VNALYTVTSNQTVLEALELMADKNIGAVLVVDDGQ---LTGIFSERDYARKGILKGRHSA 68
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVV 189
T ++E+MT +IT+ D + M +M+++HIRH+PV++ G ++G+ISI DVV A++
Sbjct: 69 DTSISEVMTPH--VITIEPDQRLDECMVIMSERHIRHLPVVEQGNLIGIISINDVVTAII 126
Query: 190 EQQKGELKRLNEFIRGEYY 208
QK + L +I G Y
Sbjct: 127 RDQKTRIASLESYISGSPY 145
>gi|295699415|ref|YP_003607308.1| signal transduction protein with CBS domains [Burkholderia sp.
CCGE1002]
gi|295438628|gb|ADG17797.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 147
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA++L TK + +DD+V +A++ MA+ IG+LVV + IAGI TERD
Sbjct: 3 SVAQLLKTKPNS--SEVYTIGADDSVYEAIRLMAEKGIGALVV---TDGDSIAGIVTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKIV RS K T V +IM+ + + D M LMT++ +RH+PVI +GR++
Sbjct: 58 YARKIVLMDRSSKATPVRDIMSKAVRFVR--PDQTTEDCMALMTERRMRHLPVIENGRLI 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 116 GMVSIGDLVKDIIAEQQFTIQQLEFYIHGE 145
>gi|389793525|ref|ZP_10196688.1| signal transduction protein [Rhodanobacter fulvus Jip2]
gi|388433739|gb|EIL90699.1| signal transduction protein [Rhodanobacter fulvus Jip2]
Length = 142
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA++ IG+L+V++ + G+ +ERDY RK++ QGRS T V++IM+
Sbjct: 21 DVPVLEAIKRMAEYRIGALMVMR---GSALVGVMSERDYARKVLLQGRSSSQTAVSDIMS 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
IT+ D ++ M+L TD IRH+PV+DG ++VG+ISI D+V+AV++ Q E++
Sbjct: 78 --GTPITVSPDTDVFDCMRLCTDSRIRHLPVVDGEQVVGVISIGDLVKAVIDAQAEEIEH 135
Query: 199 LNEFI 203
L +I
Sbjct: 136 LQRYI 140
>gi|167839482|ref|ZP_02466166.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424905115|ref|ZP_18328622.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|390929509|gb|EIP86912.1| CBS domain protein [Burkholderia thailandensis MSMB43]
Length = 154
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 99/153 (64%), Gaps = 11/153 (7%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+++VA++L +K D +SD +V +A+K MA+ +IG+L+V+ + +IAGI TE
Sbjct: 2 SLTVAQILRSKPDSGRTIHTIEKSD-SVYNAIKLMAERSIGALLVM---DGANIAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLI--TLPSDANILHAMQLMTDKHIRHVPVI-D 172
RDY RK+V RS K TRV EIMT + + + T SD M LMT+ +RH+PV+ D
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMTAKVRYVEPTQTSD----ECMALMTEHRMRHLPVLDD 113
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+++G++SI D+V++V+ Q+ + +L +I G
Sbjct: 114 GKLIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|399033777|ref|ZP_10732321.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
gi|398067844|gb|EJL59317.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
Length = 141
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 93/148 (62%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V ++L KG + V S L S TV +A+K M + NIG+++V+ E + GI +ER
Sbjct: 1 MTVNQILNAKGKN-VYSVL---SSTTVYEALKVMGEKNIGAILVMDGSE---LKGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
DY RKIV + +S K T V EIM EN T+ ++ M+LM+ K IRH+PV++ IV
Sbjct: 54 DYARKIVLKDKSSKETFVHEIM--ENNFFTVKLSDDLDACMELMSTKRIRHLPVLEDEIV 111
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFI 203
G+ISI DVV+A++E QK + LN +I
Sbjct: 112 VGIISISDVVKAIIEVQKDTINHLNSYI 139
>gi|395650715|ref|ZP_10438565.1| hypothetical protein Pext1s1_19137 [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 146
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAEVL K D K D TV +A+ M+ N+G+L V+K GE + GI +ERD
Sbjct: 3 TVAEVLKAK-DLKNQEVHTIEWDHTVFEALVVMSSKNVGALPVVKHGE---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK++ +G S T+V E+M+ +IT+ + I M +MTD H+RH+PV++ G++
Sbjct: 59 YARKLILKGLSSVTTKVHEVMS--APVITVNAHKTIEECMNIMTDSHLRHLPVVEHGKLR 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQADLIKQLEQYIRGE 146
>gi|313679251|ref|YP_004056990.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313151966|gb|ADR35817.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 146
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV +A++ MA++N+G+L V+ Q I G+F+ERDY RK++ +G++ K V+EIM+
Sbjct: 21 DVTVFEALEKMAEYNVGALPVVDASGQ--IVGLFSERDYARKVILRGKASKDIPVSEIMS 78
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
IT + M LMTDK +RH+PV++ GR+VG ISI DVV++++++QK +++
Sbjct: 79 THVLYIT--PETTDWQCMALMTDKRVRHLPVLEEGRLVGFISIGDVVKSIMDEQKFHIEQ 136
Query: 199 LNEFIR 204
L ++I+
Sbjct: 137 LEQYIQ 142
>gi|407940177|ref|YP_006855818.1| signal-transduction protein [Acidovorax sp. KKS102]
gi|407897971|gb|AFU47180.1| signal-transduction protein [Acidovorax sp. KKS102]
Length = 145
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +K D V + S V DA++ MA IG+L+V E I GIFTERD
Sbjct: 3 AVAKILQSKPDATVHTISPAAS---VLDALQLMADKGIGALIVT---EGASIVGIFTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKI GR+ T+V ++MT + ++ + D MQLM++ +RH+PV+D G++V
Sbjct: 57 YARKIALMGRTSAVTQVKDVMT--SAVMFVRPDQTSEQCMQLMSNNRLRHLPVVDGGKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
GMISI D+V+ ++ +QK +++L +I G +
Sbjct: 115 GMISIGDLVKDIISEQKFIIEQLENYITGSH 145
>gi|384428861|ref|YP_005638221.1| hypothetical protein XCR_3239 [Xanthomonas campestris pv. raphani
756C]
gi|341937964|gb|AEL08103.1| CBS domain protein [Xanthomonas campestris pv. raphani 756C]
Length = 128
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 86/126 (68%), Gaps = 6/126 (4%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
+D V +A++ MA +IG+++V+ E + + GI +ERDY RK+V + RS T VAEIM
Sbjct: 6 ADAAVIEAIRLMADKSIGAVLVM---EGERLVGIVSERDYARKVVLRDRSSSSTSVAEIM 62
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELK 197
+ + ++T+ ++ H MQLMTD RH+PV+D GR+ G+ISI D+V+AV+E Q+ ++
Sbjct: 63 S--HAVVTVSPADSVEHCMQLMTDGRFRHLPVVDNGRVQGVISIGDLVKAVIEAQQRDID 120
Query: 198 RLNEFI 203
+L +I
Sbjct: 121 QLQRYI 126
>gi|440738083|ref|ZP_20917628.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|447916261|ref|YP_007396829.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
gi|440381426|gb|ELQ17958.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|445200124|gb|AGE25333.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
Length = 146
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D TV +A+ M++ N+G+L V+K G + GI +ERD
Sbjct: 3 TVAQLLKAK-DQKHHDVHTIQWDHTVFEALVRMSEKNVGALPVVKDGA---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ +G S TRV ++M+ + +IT+ ++ M +MTD H+RH+PV+ DG+++
Sbjct: 59 YARKLILKGLSSVTTRVDQVMS--SPVITVEPHKSVDECMNIMTDSHLRHLPVVEDGKLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQTDLIRQLEQYIRGE 146
>gi|395220025|ref|ZP_10402617.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
gi|394453756|gb|EJF08577.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
Length = 145
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V +L KG+ + TV A++ M + N+G+L+V+ G+ AG+FTERD
Sbjct: 3 TVRHILQKKGN----KVISVAPTSTVYSALETMVEQNVGALIVMDNGK---FAGMFTERD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IV 176
Y RK++ +G++ + T V EIM++ +T+ D + M+LMT K+IRH+PV D + ++
Sbjct: 56 YARKVILKGKASRDTLVQEIMSEHP--VTVTPDTTLEQCMKLMTQKYIRHLPVFDNQELI 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
G++SI D+V+ ++++QK ++ L +I G +
Sbjct: 114 GLVSIGDIVKCMMDEQKCIIEDLEHYITGHH 144
>gi|407710796|ref|YP_006794660.1| hypothetical protein BUPH_06076 [Burkholderia phenoliruptrix
BR3459a]
gi|407239479|gb|AFT89677.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 147
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L TK + + +DD+V +A+K MA IG+LVV E IAGI TERD
Sbjct: 3 TVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVV---TEGDTIAGIVTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V RS K T V EIM+ + + D M LMT++ +RH+PVI+ R+V
Sbjct: 58 YARKVVLMDRSSKATPVREIMSKAVRFVR--PDQTTDDCMALMTERRMRHLPVIENDRLV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 116 GMVSIGDLVKNIIAEQQFTIQQLEFYIHGE 145
>gi|167565573|ref|ZP_02358489.1| CBS domain protein [Burkholderia oklahomensis EO147]
Length = 154
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 97/153 (63%), Gaps = 11/153 (7%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+++VA +L +K D +SD +V +A+K MA+ +IG+L+V+ + IAGI TE
Sbjct: 2 SLTVAHILRSKPDSGRTIHTIEKSD-SVYNAIKLMAEKSIGALLVMDGAD---IAGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLI--TLPSDANILHAMQLMTDKHIRHVPVI-D 172
RDY RK+V RS K TRV EIMT + + + T SD M LMT+ +RH+PV+ D
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSD----ECMALMTEHRMRHLPVLDD 113
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+++G++SI D+V++V+ Q+ + +L +I G
Sbjct: 114 GKLIGLVSIGDLVKSVIADQQFTIDQLEHYIHG 146
>gi|312960091|ref|ZP_07774603.1| CBS domain protein [Pseudomonas fluorescens WH6]
gi|311285585|gb|EFQ64154.1| CBS domain protein [Pseudomonas fluorescens WH6]
Length = 146
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 99/150 (66%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D TV +A+ M++ N+G+L V+K G+ + GI +ERD
Sbjct: 3 TVAQLLKAK-DHKNQDVHTIKWDHTVFEALVRMSEKNVGALPVVK-GDV--VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI+ +G S T+V E+M+ + +IT+ + ++ M +MTD H+RH+PV+ DG+++
Sbjct: 59 YARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEECMNIMTDSHLRHLPVVEDGKLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAALIKQLEQYIRGE 146
>gi|221065849|ref|ZP_03541954.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|264679584|ref|YP_003279491.1| signal-transduction protein with CBS [Comamonas testosteroni CNB-2]
gi|220710872|gb|EED66240.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|262210097|gb|ACY34195.1| putative signal-transduction protein with CBS [Comamonas
testosteroni CNB-2]
Length = 151
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L KG+ + S DT+ A++ MA+ +IG+L+VL+ GE IAGI TERD
Sbjct: 3 TVAEILRAKGNSTIYS---VSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--RI 175
Y RKI QGRS TRV E+MT + + LP + M LMT +RH+PVI+ +
Sbjct: 57 YARKIALQGRSSASTRVDEVMTRKVHCV-LPRQTS-EECMSLMTSNRMRHLPVINETREL 114
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+ ++ Q+ + +L +I G
Sbjct: 115 QGLISIGDIVKEIISAQQFTIHQLEHYISG 144
>gi|21232293|ref|NP_638210.1| hypothetical protein XCC2862 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767573|ref|YP_242335.1| hypothetical protein XC_1246 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990688|ref|YP_001902698.1| hypothetical protein xccb100_1292 [Xanthomonas campestris pv.
campestris str. B100]
gi|21114059|gb|AAM42134.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572905|gb|AAY48315.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732448|emb|CAP50642.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 142
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 86/126 (68%), Gaps = 6/126 (4%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
+D V +A++ MA +IG+++V+ E + + GI +ERDY RK+V + RS T VAEIM
Sbjct: 20 ADAAVIEAIRLMADKSIGAVLVM---EGERLVGIVSERDYARKVVLRDRSSSSTSVAEIM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELK 197
+ + ++T+ ++ H MQLMTD RH+PV+D GR+ G+ISI D+V+AV+E Q+ ++
Sbjct: 77 S--HAVVTVSPADSVEHCMQLMTDGRFRHLPVVDNGRVQGVISIGDLVKAVIEAQQHDID 134
Query: 198 RLNEFI 203
+L +I
Sbjct: 135 QLQRYI 140
>gi|350545690|ref|ZP_08915153.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
gi|350526536|emb|CCD40224.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
Length = 167
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 100/166 (60%), Gaps = 11/166 (6%)
Query: 45 SSSPTEEKGLENI-SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKP 103
+ SP E ++ +VA+VL +K D V + S V DA+K MA +IG+++V +
Sbjct: 9 AGSPREASRRRSMATVAQVLNSKPDQTVYTIAATAS---VFDAIKLMADKHIGAVIVTEG 65
Query: 104 GEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDK 163
E I GI TERDY RK+V R+ K T V +IMT + + D M LMTDK
Sbjct: 66 DE---IVGIMTERDYARKVVLMDRASKQTPVHDIMTSHVRYVR--PDQTTDDCMALMTDK 120
Query: 164 HIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI-RGEY 207
+RH+PVI +G++VGMISI D+V+ ++ +Q+ +++L +I RGE+
Sbjct: 121 RMRHLPVIENGKLVGMISIGDLVKNIISEQQFTIQQLEYYILRGEH 166
>gi|408822883|ref|ZP_11207773.1| putative signal transduction protein [Pseudomonas geniculata N1]
Length = 143
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTEVAEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
K++T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL +
Sbjct: 78 --AKVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 199 LNEFI 203
L ++I
Sbjct: 136 LQQYI 140
>gi|424071979|ref|ZP_17809400.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407998122|gb|EKG38545.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 146
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ NIG+L V+ E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVKDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 146 TLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
T+ D +L A++LM +K+I +PV++G R+VG+IS D R VV
Sbjct: 20 TIGPDQMVLEALKLMAEKNIGALPVVEGNRVVGVISERDYARKVV 64
>gi|429331441|ref|ZP_19212197.1| CBS domain-containing protein [Pseudomonas putida CSV86]
gi|428763853|gb|EKX86012.1| CBS domain-containing protein [Pseudomonas putida CSV86]
Length = 146
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A+ MA+ N+G+L V++ GE + GI +ERDY RK+V +GRS T V EIM+
Sbjct: 26 TVLEALMVMAEKNVGALPVVEGGE---VVGIVSERDYARKMVLKGRSSVGTEVREIMS-- 80
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+ +IT+ S N+ M +MT+ H+RH+PV+ DG+++G++SI D+V+ + +Q +++L
Sbjct: 81 SPVITVNSHQNVDTCMTMMTNSHLRHLPVVEDGKLLGLLSIGDLVKEAIAEQADLIRQLE 140
Query: 201 EFIRGE 206
+IRGE
Sbjct: 141 GYIRGE 146
>gi|221209739|ref|ZP_03582720.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221170427|gb|EEE02893.1| CBS domain protein [Burkholderia multivorans CGD1]
Length = 149
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A++L K D + + D V DA+K M+ IG+L+V+ + IAGI TERDY
Sbjct: 1 MAQILKAKPDSGRTIY-TVKKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERDY 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
RK+V Q RS K TRV EIMT + + + PS + M LMT+ +RH+PV+ DG+++G
Sbjct: 57 ARKVVLQDRSSKATRVEEIMTTKVRYVE-PSQTSD-ECMALMTEHRMRHLPVLDDGKLIG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
++SI D+V++V+ Q+ + +L +I G
Sbjct: 115 LVSIGDLVKSVIADQQFTISQLEHYIHG 142
>gi|408482496|ref|ZP_11188715.1| hypothetical protein PsR81_18138 [Pseudomonas sp. R81]
Length = 146
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL K D K + D TV +A+ M++ N+G+L V++ G + GI +ERD
Sbjct: 3 TVAQVLKAK-DQKNQEVHVIKHDHTVFEALVRMSEKNVGALPVVQDGV---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI+ +G S T+V E+M+ + +IT+ + + M +MTD H+RH+PV+ +G+++
Sbjct: 59 YARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKKVDECMNIMTDSHLRHLPVVENGKLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIADQADLIKQLEQYIRGE 146
>gi|443473996|ref|ZP_21064017.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
gi|442904931|gb|ELS29846.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
Length = 146
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K +V + +D + DA++ +A+ NIG+L V + G + GI +ERD
Sbjct: 3 TVAQMLRAKPRQQVHT---IEADVPMLDALRLLAEQNIGALPVTEGG---RLVGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y R+ V QGRS T V E MT+ + T+ + +I M LMTD+H+RH+PV+ DG+++
Sbjct: 57 YARRGVLQGRSSVATPVREFMTE--PVFTVNAGQSIRECMSLMTDRHMRHLPVVEDGQLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K L ++IRGE
Sbjct: 115 GLLSIGDLVKEAMAEQDELIKHLEQYIRGE 144
>gi|418531800|ref|ZP_13097711.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
gi|371451302|gb|EHN64343.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
Length = 151
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 10/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L KG+ + S DT+ A++ MA+ +IG+L+VL+ GE IAGI TERD
Sbjct: 3 TVAEILRAKGNSTIYS---VSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--RI 175
Y RKI QGRS TRV E+MT + + LP + M LMT +RH+PVI +
Sbjct: 57 YARKIALQGRSSASTRVDEVMTRKVHCV-LPRQTS-EECMSLMTSNRMRHLPVISETREL 114
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+ ++ Q+ + +L +I G
Sbjct: 115 QGLISIGDIVKEIISAQQFTIHQLEHYISG 144
>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
Length = 146
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 87/139 (62%), Gaps = 6/139 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK + + D TV +A++ MA+ NIG+L V+ G + GI TERDY RK++ +G+S
Sbjct: 13 DKSPNIWSIKPDATVYEAIELMAEKNIGALPVVDRG---RLLGILTERDYARKVILEGKS 69
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRA 187
K T V+ IM+ +T P+D + M++MTDK +RH+PV++ G VG++SI DVVR
Sbjct: 70 SKDTSVSAIMSRSPITVT-PAD-TVGECMRIMTDKRVRHLPVMEGGDFVGILSIGDVVRW 127
Query: 188 VVEQQKGELKRLNEFIRGE 206
++ Q + +L +I GE
Sbjct: 128 MISAQTATIDQLTRYIYGE 146
>gi|424067347|ref|ZP_17804803.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408000955|gb|EKG41290.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 146
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ NIG+L V+ E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 146 TLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
T+ D +L A++LM +K+I +PV++G R+VG+IS D R VV
Sbjct: 20 TIGPDQMVLEALKLMAEKNIGALPVVEGNRVVGVISERDYARKVV 64
>gi|423095419|ref|ZP_17083215.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887894|gb|EJL04377.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 146
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 87/127 (68%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ TV +A++ MA+ N+G+L V++ G+ + G+F+ERDY RK+V QGRS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIENGQ---VVGVFSERDYARKMVLQGRSSVGTPVRTIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+IT S +I M++MTD H+RH+PV+D G+++G++SI D+V+ + +Q +++
Sbjct: 81 --APVITADSQQSIDRCMEVMTDSHLRHLPVLDNGQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|398858953|ref|ZP_10614637.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238054|gb|EJN23791.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA+K MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V EIM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++ G ++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVLESGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|294508474|ref|YP_003572532.1| hypothetical protein SRM_02659 [Salinibacter ruber M8]
gi|294344802|emb|CBH25580.1| Conserved hypothetical protein containing CBS domain [Salinibacter
ruber M8]
Length = 237
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 13/189 (6%)
Query: 27 YVVEGRKTCSR-----FGCVISSSSSPTEEKGLENISVAEVLMTKGD-DKVGSWLCCRSD 80
YV R+ C R CV + +E + N SV +VL KG + L
Sbjct: 48 YVHLDRRACLRSPSLLHSCVTAFLLPMDDEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQ 107
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+V D + MA+ +GS+VV G IAGIFTERD++RK+ +GR+P+ T V +MT+
Sbjct: 108 DSVYDCIDRMAEIGVGSIVVTADGA---IAGIFTERDHMRKMALEGRAPRDTAVQTVMTE 164
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ +T P+ ++ A+ M D RH+PV+ DG++ G+IS+ D +R + E K + +
Sbjct: 165 DVATVT-PAQ-SLEDALDRMRDLQCRHLPVVDADGQLSGIISMRDCMRQLSEAAKSKALQ 222
Query: 199 LNEFIRGEY 207
L E++ EY
Sbjct: 223 LIEYMEEEY 231
>gi|319786359|ref|YP_004145834.1| signal transduction protein with CBS domains [Pseudoxanthomonas
suwonensis 11-1]
gi|317464871|gb|ADV26603.1| putative signal transduction protein with CBS domains
[Pseudoxanthomonas suwonensis 11-1]
Length = 142
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 91/138 (65%), Gaps = 6/138 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
+K D V DAV+ MA +IG+++V++ GE +AGI +ERDY RKIV QGRS
Sbjct: 10 EKPAEVFAVPPDAPVIDAVRLMADKSIGAVLVMRGGE---LAGILSERDYARKIVLQGRS 66
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRA 187
T V IMT E ++T+ D + MQL+T++ IRH+PV+ DG +VG++SI D+V++
Sbjct: 67 SADTPVRAIMTAE--VVTVAPDTTVPACMQLVTERRIRHLPVLADGGVVGVVSIGDLVKS 124
Query: 188 VVEQQKGELKRLNEFIRG 205
V+ +Q+ EL++L +I G
Sbjct: 125 VIAEQQVELEQLQRYIAG 142
>gi|423691049|ref|ZP_17665569.1| CBS domain protein [Pseudomonas fluorescens SS101]
gi|387999980|gb|EIK61309.1| CBS domain protein [Pseudomonas fluorescens SS101]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D TV +A+ M++ N+G+L V+K + GI +ERD
Sbjct: 3 TVAQLLKAK-DQKNQDVHTIKWDHTVFEALVRMSEKNVGALPVVKDDV---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI+ +G S T+V E+M+ + +IT+ + ++ M +MTD H+RH+PV+ DG+++
Sbjct: 59 YARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEECMNIMTDSHLRHLPVVEDGKLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAALIQQLEQYIRGE 146
>gi|399000051|ref|ZP_10702782.1| CBS domain-containing protein [Pseudomonas sp. GM18]
gi|398130463|gb|EJM19800.1| CBS domain-containing protein [Pseudomonas sp. GM18]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 85/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA+K MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V EIM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEEGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M++MTD H+RH+PV++ G ++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSLQSIERCMEVMTDSHLRHLPVLEGGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|83816083|ref|YP_446538.1| hypothetical protein SRU_2439 [Salinibacter ruber DSM 13855]
gi|83757477|gb|ABC45590.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 229
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 13/189 (6%)
Query: 27 YVVEGRKTCSR-----FGCVISSSSSPTEEKGLENISVAEVLMTKGD-DKVGSWLCCRSD 80
YV R+ C R CV + +E + N SV +VL KG + L
Sbjct: 40 YVHLDRRACLRSPSLLHSCVTAFLLPMDDEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQ 99
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+V D + MA+ +GS+VV G IAGIFTERD++RK+ +GR+P+ T V +MT+
Sbjct: 100 DSVYDCIDRMAEIGVGSIVVTADGA---IAGIFTERDHMRKMALEGRAPRDTAVQTVMTE 156
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ +T P+ ++ A+ M D RH+PV+ DG++ G+IS+ D +R + E K + +
Sbjct: 157 DVATVT-PAQ-SLEDALDRMRDLQCRHLPVVDADGQLSGIISMRDCMRQLSEAAKSKALQ 214
Query: 199 LNEFIRGEY 207
L E++ EY
Sbjct: 215 LIEYMEEEY 223
>gi|398840530|ref|ZP_10597765.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398110489|gb|EJM00392.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA+K MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V EIM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV+ +G ++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVLENGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|425899648|ref|ZP_18876239.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397890377|gb|EJL06859.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A++ MAQ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++G +++G++SI D+V+ + +Q G +++
Sbjct: 81 --APVVTADSQHSIERCMAVMTDSHLRHLPVLEGEQLIGLLSIGDLVKEAIVEQAGLIRQ 138
Query: 199 LNEFIRGE 206
L +IRG+
Sbjct: 139 LEHYIRGD 146
>gi|399522669|ref|ZP_10763332.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109533|emb|CCH39893.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L TK + + S +DD++ D ++ MA+ +G+LVVL G + GI +ERD
Sbjct: 3 TVAELLRTKSNTFLYS---VDADDSLLDGLRIMAEKGVGALVVLSGG---RMVGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y+RK RS +V IMT E +I++ N+ + MQLMT++ +RH+PV+ +G ++
Sbjct: 57 YVRKAALADRSMLDAKVNTIMTRE--VISVSPRDNLQYCMQLMTERRLRHLPVLAEGELI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 115 GLLSIGDLVKETIAEQADLIRQLEQYIRGE 144
>gi|398872534|ref|ZP_10627822.1| CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398202271|gb|EJM89118.1| CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 85/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV DA++ MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V IM+
Sbjct: 24 DQTVLDALRMMAEKNVGALPVMEEGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++G +++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQTELIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|320161957|ref|YP_004175182.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
gi|319995811|dbj|BAJ64582.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
Length = 140
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 91/145 (62%), Gaps = 10/145 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V +L KG D W D TV DA++ MA ++G+LVV+ E + GI +ERD
Sbjct: 4 TVRHILEVKGSD---VW-SIGPDATVFDALRMMADKDVGALVVM---ENDKVVGIISERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IV 176
Y RKI+ G+S K T V EIM+ L T+ D + AM++MT+K +RH+PV++G ++
Sbjct: 57 YARKIILHGKSSKETLVREIMS--TNLYTVHPDQTVEEAMEIMTNKRVRHLPVMEGETLL 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNE 201
GMISI DVV+ ++ +Q+ +K +++
Sbjct: 115 GMISIGDVVKNIIYRQREIIKSMSQ 139
>gi|425898813|ref|ZP_18875404.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397891898|gb|EJL08376.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 93/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVAEVL K V +A+ MA+ N+G+L V++ GE + G+ +ERD
Sbjct: 3 SVAEVLKLKAKHN-QQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V+ IM+ + +IT+ S ++ M +MTD H+RH+PV+ DG+++
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVETCMGIMTDSHLRHLPVVEDGQLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQANLIRQLEQYIRGE 146
>gi|389776666|ref|ZP_10194097.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
gi|388436468|gb|EIL93332.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
Length = 142
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 85/122 (69%), Gaps = 6/122 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A+K+MA+H +G+L+V+ GE+ + G+ +ERDY RK++ QGRS T V++IMT
Sbjct: 24 VLEAIKHMAEHRVGALLVMH-GEK--LVGVMSERDYARKVILQGRSSSQTAVSDIMT--G 78
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLNE 201
+T+ D ++ M+L TD IRH+PV++G +VG+ISI D+V+AV++ Q +++ L
Sbjct: 79 TPLTVGPDTDVFDCMRLCTDSRIRHLPVVEGDTVVGVISIGDLVKAVIDAQAEQIEHLER 138
Query: 202 FI 203
+I
Sbjct: 139 YI 140
>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
Length = 239
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 85/133 (63%), Gaps = 7/133 (5%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
L SD + +A++ M Q+ +G+++VL Q + GIFTERDY+ K+ QG S + +
Sbjct: 97 LLTINSDQLIIEALRKMTQNKVGAIMVLDSNGQ--LEGIFTERDYVGKVALQGLSSRQSL 154
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID---GRIVGMISIVDVVRAVVE 190
V E+MT K T+ +D+ ++ M +MT++ RH+PV+D +++GM+SI D++R+V +
Sbjct: 155 VKEVMTRGVK--TISADSCVVDTMHIMTNQRFRHLPVVDKESNKVLGMVSIQDLIRSVHD 212
Query: 191 QQKGELKRLNEFI 203
QK +K L EF+
Sbjct: 213 NQKETIKYLREFL 225
>gi|323529966|ref|YP_004232118.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|323386968|gb|ADX59058.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
Length = 147
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L TK + + +DD+V +A+K MA IG+LVV + IAGI TERD
Sbjct: 3 TVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVV---TDGDTIAGIVTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V RS K T V EIM+ + + D M LMT++ +RH+PVI+ R+V
Sbjct: 58 YARKVVLMDRSSKATPVREIMSKAVRFVR--PDQTTDDCMALMTERRMRHLPVIENDRLV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 116 GMVSIGDLVKNIIAEQQFTIQQLEFYIHGE 145
>gi|218297014|ref|ZP_03497691.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242569|gb|EED09106.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 143
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 101/148 (68%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +VL+ KG G+ TV +A++ MAQH+IG+L+V+ E + + GIF+ER
Sbjct: 1 MTVRQVLLRKG----GAVYAISPQATVLEALERMAQHDIGALLVM---EGEELVGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVP-VIDGRI 175
DY RK+V GR K TRV E+MT E ++T+ +A++ AM+LMT+ +RH+P V +G++
Sbjct: 54 DYARKLVLLGRFSKDTRVEEVMTRE--VVTIRPEADLAEAMRLMTEHRVRHLPVVEEGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI D V+A++ +Q+ ++ L+ +I
Sbjct: 112 VGVISIGDAVKAIITEQEMLIEELSRYI 139
>gi|383757315|ref|YP_005436300.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
gi|381377984|dbj|BAL94801.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
Length = 142
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 86/133 (64%), Gaps = 6/133 (4%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
G+ DD+V A++ +A+H IG+L+V+ G + G+ +ERDY RK+ QGR+ +
Sbjct: 13 GTLWHLHPDDSVYAALELLAEHEIGALLVMDGGR---LVGVVSERDYTRKVALQGRNSRE 69
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVE 190
T+VAEIMT E ++ + SDA + M LM++ IRH+PV+DG ++GMISI D++ ++
Sbjct: 70 TKVAEIMTRE--VVRVQSDAPMHECMALMSEHRIRHLPVVDGATVLGMISIRDLLDELIA 127
Query: 191 QQKGELKRLNEFI 203
+Q+ + L +I
Sbjct: 128 EQERTIAELEHYI 140
>gi|456734307|gb|EMF59123.1| Inosine-5'-monophosphate dehydrogenase [Stenotrophomonas
maltophilia EPM1]
Length = 143
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+++T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL +
Sbjct: 78 --TQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 199 LNEFI 203
L ++I
Sbjct: 136 LQQYI 140
>gi|387893315|ref|YP_006323612.1| hypothetical protein PflA506_2125 [Pseudomonas fluorescens A506]
gi|387159645|gb|AFJ54844.1| CBS domain protein [Pseudomonas fluorescens A506]
Length = 146
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D TV +A+ M++ N+G+L V+K + GI +ERD
Sbjct: 3 TVAQLLKAK-DQKNQDVHTIKWDHTVFEALVRMSEKNVGALPVVKDDV---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI+ +G S T+V E+M+ + +IT+ + ++ M +MTD H+RH+PV+ DG+++
Sbjct: 59 YARKIMLKGLSSVTTKVHEVMS--SPVITVDTHKSVEACMNIMTDSHLRHLPVVEDGKLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAALIQQLEQYIRGE 146
>gi|424669809|ref|ZP_18106834.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
gi|401071880|gb|EJP80391.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
Length = 143
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+++T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL +
Sbjct: 78 --TQVVTVSPGEEVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 199 LNEFI 203
L ++I
Sbjct: 136 LQQYI 140
>gi|398875935|ref|ZP_10631096.1| CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398884298|ref|ZP_10639237.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398195002|gb|EJM82059.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398205711|gb|EJM92491.1| CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 85/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V +IM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M++MTD H+RH+PV+D G ++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMEVMTDSHLRHLPVLDSGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEYYIRG 145
>gi|429211285|ref|ZP_19202451.1| putative CBS domain protein [Pseudomonas sp. M1]
gi|428158699|gb|EKX05246.1| putative CBS domain protein [Pseudomonas sp. M1]
Length = 145
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 98/150 (65%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K +V + + V DA++ MA N+G+L V+ G+ + G+ +ERD
Sbjct: 3 TVAQLLHAKQSQQVHT---IGPHEMVLDALRVMAVKNVGALPVVDNGQ---VVGVVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ QGRS T V+ IM+ + ++T+ S N+ M +MT++H+RH+PV+ +G++V
Sbjct: 57 YARKMILQGRSSVGTPVSAIMS--SPVVTVDSQQNVDTCMSIMTERHLRHLPVVENGQLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 115 GLLSIGDLVKEAIAEQAQLIQQLEQYIRGE 144
>gi|385204300|ref|ZP_10031170.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385184191|gb|EIF33465.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 164
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA++L +K +V S C S V DA+ MA +G+L+V G IAGI TERD
Sbjct: 3 SVAQLLRSKASQRVWSTQACAS---VYDAIAVMAHRRVGALIVAHEGR---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV RS ++T V +IM+ + ++ D M LMT+ IR++PVI G+++
Sbjct: 57 YARKIVLMDRSSRHTPVRDIMSTAVRYVS--PDQTTEECMALMTEYRIRYLPVITAGQVI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
GM+SI D+V+ ++ +Q+ +++L +I G
Sbjct: 115 GMVSIGDLVQNLIVEQEQTIQQLEHYIHG 143
>gi|395497949|ref|ZP_10429528.1| hypothetical protein PPAM2_17784 [Pseudomonas sp. PAMC 25886]
Length = 146
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL +K D + D TV +A+ MA N+G+L VL+ G+ + GI +ERD
Sbjct: 3 TVAQVLKSK-DQQNQQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ G S T+ EIM + +IT+ + + M +MTD+H+RH+PV+ +G ++
Sbjct: 59 YARKVILHGLSSVATKAHEIMN--SPVITVDTHQTVETCMTIMTDRHLRHLPVVENGELL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQADLIKQLEQYIRGE 146
>gi|365097177|ref|ZP_09331422.1| signal-transduction protein [Acidovorax sp. NO-1]
gi|363413471|gb|EHL20667.1| signal-transduction protein [Acidovorax sp. NO-1]
Length = 145
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 94/150 (62%), Gaps = 9/150 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA++L +K D V + S V DA++ MA +IG+L+V E + I GIFTERDY
Sbjct: 4 VAKILQSKPDASVHTITPAAS---VLDALRLMADKSIGALIV---TEGEAIVGIFTERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
RKI GR+ T+V ++MT + ++ + D MQ+M++ +RH+PV+ +G++VG
Sbjct: 58 ARKIALMGRTSAVTQVKDVMT--SAVMFVRPDQTSEQCMQIMSNNRLRHLPVLSNGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
MISI D+V+ ++ +QK +++L +I G +
Sbjct: 116 MISIGDLVKDIISEQKFIIEQLENYITGTH 145
>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 162
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 93/152 (61%), Gaps = 10/152 (6%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
++V ++L KG R D +V +A+ MA+ +IGS++V+ + + + GIFTE
Sbjct: 16 TVTVRQILEEKG----SRTYSVRPDCSVFEALGVMAEFDIGSVIVV---DNERLVGIFTE 68
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V +G + V+E+MT N P+ + M +MT+ RH+PV+D GR
Sbjct: 69 RDYARKVVLKGLGSRDVSVSELMT-PNPCTVTPTH-TVDEVMAIMTENRFRHLPVVDHGR 126
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
IVGM++I D+V++VV QQ+ ++ L+ +I G+
Sbjct: 127 IVGMVTIGDMVKSVVSQQQATIRHLSSYIAGD 158
>gi|398905812|ref|ZP_10653134.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398174118|gb|EJM61925.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 84/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA+K MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V EIM+
Sbjct: 24 DRMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++ G ++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVLESGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|377820853|ref|YP_004977224.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935688|gb|AET89247.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 185
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V +VL K D V + ++ +V +AV M++ +G+LVV G + GI TERD
Sbjct: 20 TVKQVLKAKSDAAVHTI---DAEASVYEAVALMSRAEVGALVVTVGGA---VCGIVTERD 73
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK++ Q ++ + T V EIMT ++L + A+ M +MT + IRH+PVI+ GR++
Sbjct: 74 YARKVILQDKASRTTTVCEIMTAPIMSVSLRTSAD--ECMAMMTQQRIRHLPVIEGGRLM 131
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
GMISI D+VR ++E+Q+ + +L ++RG +
Sbjct: 132 GMISIGDMVRHLIEEQQFAIDQLETYVRGAH 162
>gi|449018296|dbj|BAM81698.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 260
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 86/146 (58%), Gaps = 17/146 (11%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIA----GIFTERDYLRKIVGQGRSPKYT-- 132
++DT+++A+K M HNIG L+V++ +Q A GI +ERD R ++ +G S +
Sbjct: 115 ANDTMQNALKKMFIHNIGCLLVVEQPQQNDEACKPVGIISERDLTRLLISRGSSGAASAG 174
Query: 133 ----------RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
+V E MT N LI++ D ++ ++LM + +RH+PV+ DG+ +GM+SI
Sbjct: 175 RTTADLLLTVKVHEFMTKANALISVTPDTDLASVLELMASRRLRHLPVVRDGQAIGMVSI 234
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGEY 207
DVVR ++E+ + E L E+I G Y
Sbjct: 235 GDVVRRLIEESREEADALKEYIAGTY 260
>gi|170696511|ref|ZP_02887635.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170138558|gb|EDT06762.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 146
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 92/150 (61%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L TK + V +DD+V +A++ MA IG+LVV + IAGI TERD
Sbjct: 3 TVAQLLKTKPNTTV---YTIGADDSVYEAIRLMADKGIGALVV---TDGDSIAGIITERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V RS K T V EIM+ + + D M LMT++ +RH+PVI+ R++
Sbjct: 57 YARKVVLMDRSSKATPVREIMSKAVRFVR--PDQTTDDCMALMTERRMRHLPVIENDRLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 115 GMVSIGDLVKNIIAEQQFTIQQLEFYIHGE 144
>gi|386719569|ref|YP_006185895.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
gi|384079131|emb|CCH13727.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
Length = 136
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT
Sbjct: 14 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 70
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+++T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL +
Sbjct: 71 --AQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 128
Query: 199 LNEFI 203
L ++I
Sbjct: 129 LQQYI 133
>gi|389680723|ref|ZP_10172072.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|399009930|ref|ZP_10712327.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
gi|388555310|gb|EIM18554.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|398109029|gb|EJL98973.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
Length = 146
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 93/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVAEVL K V +A+ MA+ N+G+L V++ GE + G+ +ERD
Sbjct: 3 SVAEVLKLKAKHN-QQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V+ IM+ + +IT+ S ++ M +MTD H+RH+PV+ DG+++
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMS--SPVITVDSHQSVETCMGIMTDSHLRHLPVVEDGQLL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQADLIRQLEQYIRGE 146
>gi|194366828|ref|YP_002029438.1| putative signal transduction protein [Stenotrophomonas maltophilia
R551-3]
gi|194349632|gb|ACF52755.1| putative signal-transduction protein with CBS domains
[Stenotrophomonas maltophilia R551-3]
Length = 143
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+++T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL +
Sbjct: 78 --AQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 199 LNEFI 203
L ++I
Sbjct: 136 LQQYI 140
>gi|209516332|ref|ZP_03265189.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209503268|gb|EEA03267.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 147
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA++L TK + +DD+V +A++ MA+ IG+LVV + IAGI TERD
Sbjct: 3 SVAQLLKTKPNS--SDVYTIGADDSVYEAIRLMAEKGIGALVV---TDGDSIAGIVTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKIV RS K T V +IM+ + + D M LMT++ +RH+PVI + R++
Sbjct: 58 YARKIVLMDRSSKATPVRDIMSKAVRFVR--PDQTTEECMALMTERRMRHLPVIQNDRLI 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 116 GMVSIGDLVKDIIAEQQFTIQQLEFYIHGE 145
>gi|344208487|ref|YP_004793628.1| signal transduction protein with CBS domains [Stenotrophomonas
maltophilia JV3]
gi|343779849|gb|AEM52402.1| putative signal transduction protein with CBS domains
[Stenotrophomonas maltophilia JV3]
Length = 143
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+++T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL +
Sbjct: 78 --AQVVTVSPGEKVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQ 135
Query: 199 LNEFI 203
L ++I
Sbjct: 136 LQQYI 140
>gi|395797325|ref|ZP_10476615.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|421139918|ref|ZP_15599943.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
gi|395338425|gb|EJF70276.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|404508933|gb|EKA22878.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
Length = 146
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 93/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL +K D D TV +A+ MA N+G+L VL+ G+ + GI +ERD
Sbjct: 3 TVAQVLKSK-DQHNHQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ G S T+ EIM + +IT+ + + M +MTD+H+RH+PV+ +G ++
Sbjct: 59 YARKVILHGLSSVTTKAHEIMN--SPVITVDTHQTVETCMTIMTDRHLRHLPVVENGELL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQADLIKQLEQYIRGE 146
>gi|330505348|ref|YP_004382217.1| signal-transduction protein [Pseudomonas mendocina NK-01]
gi|328919634|gb|AEB60465.1| signal-transduction protein [Pseudomonas mendocina NK-01]
Length = 145
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 98/151 (64%), Gaps = 9/151 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAEV+ +K V S S+D++ D ++ +A+ IG+LVVL G + GI +ERD
Sbjct: 3 TVAEVIRSKAHTSVYS---VDSEDSLRDGLRILAEKGIGALVVLSGG---RLVGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y+RK+ S +++EIMT E +I++ N+ + M+LMT++ +RH+PV+ +G ++
Sbjct: 57 YVRKVALADPSMLDAKISEIMTRE--VISVGPRDNLQYCMELMTERRLRHLPVLAEGELI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
G++SI D+V+ + +Q +++L ++IRGE+
Sbjct: 115 GLLSIGDLVKETIAEQADLIRQLEQYIRGEH 145
>gi|307727770|ref|YP_003910983.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307588295|gb|ADN61692.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 147
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L TK + + +DD+V +A++ MA IG+LVV + IAGI TERD
Sbjct: 3 TVAQLLKTKPNHT--TVFTIGADDSVYEAIRLMADKGIGALVV---TDGDSIAGIVTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V RS K T V EIM+ + + D M LMT++ +RH+PVI+ R+V
Sbjct: 58 YARKVVLMDRSSKATPVREIMSKAVRFVR--PDQTTDDCMALMTERRMRHLPVIENDRLV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GM+SI D+V+ ++ +Q+ +++L +I GE
Sbjct: 116 GMVSIGDLVKNIIAEQQFTIQQLEFYIHGE 145
>gi|299533325|ref|ZP_07046709.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
gi|298718855|gb|EFI59828.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
Length = 151
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 90/150 (60%), Gaps = 10/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VAE+L KG+ + S DT+ A++ MA+ +IG+L+VL+ G+ IAGI TERD
Sbjct: 3 TVAEILRAKGNSTIYS---VSPSDTMLAALQLMAEKSIGALLVLEGGD---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--RI 175
Y RKI QGRS TRV E+MT + + LP + M LMT +RH+PVI +
Sbjct: 57 YARKIALQGRSSASTRVDEVMTRKVHCV-LPRQTS-EECMSLMTSNRMRHLPVISETREL 114
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+ ++ Q+ + +L +I G
Sbjct: 115 QGLISIGDIVKEIISAQQFTIHQLEHYISG 144
>gi|254525290|ref|ZP_05137345.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
gi|219722881|gb|EED41406.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
Length = 143
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 86/125 (68%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGARLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+++T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL
Sbjct: 78 --AQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDH 135
Query: 199 LNEFI 203
L ++I
Sbjct: 136 LQQYI 140
>gi|330809809|ref|YP_004354271.1| hypothetical protein PSEBR_a2964 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378950736|ref|YP_005208224.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|423697458|ref|ZP_17671948.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327377917|gb|AEA69267.1| Conserved hypothetical protein, CBS domain-containing protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|359760750|gb|AEV62829.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|388003991|gb|EIK65318.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 87/127 (68%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ TV +A++ MA+ N+G+L V++ G+ + G+F+ERDY RK+V +GRS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIEDGQ---VVGVFSERDYARKMVLKGRSSVGTTVRTIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M++MTD H+RH+PV+D G+++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIDRCMEVMTDSHLRHLPVLDNGQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|226941745|ref|YP_002796819.1| hypothetical protein LHK_02830 [Laribacter hongkongensis HLHK9]
gi|226716672|gb|ACO75810.1| CBS domain protein [Laribacter hongkongensis HLHK9]
Length = 151
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 82/127 (64%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV A++ +A+H+IG++ V+ + + GIF+ERDY R+++ +GR T V +MT
Sbjct: 23 DCTVFQALQKLAEHDIGAVAVM---DGPRLVGIFSERDYARRMILEGRQSSGTPVTAVMT 79
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+ ++I + D M +MTDK IRH+PV D GR++GM+SI DVVR+ + +Q+ +
Sbjct: 80 E--RVIVVHPDTPASQCMAIMTDKRIRHLPVADNGRVIGMVSIGDVVRSTLAEQQIAIDS 137
Query: 199 LNEFIRG 205
L +++ G
Sbjct: 138 LTQYVMG 144
>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
Length = 241
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 92/149 (61%), Gaps = 5/149 (3%)
Query: 52 KGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAG 111
K +I V +++ K + +G + D TV DA+K M + +G+ +V+ + + G
Sbjct: 90 KSYVDIQVGKIIENKIKNNLGRIVRVDEDSTVYDAIKVMNEKRVGATIVV--DKNNRMTG 147
Query: 112 IFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI 171
IF+ERDYL K+ +G +P+ T V +IM+ +K+IT+ D+ + +MT ++IRH+PV+
Sbjct: 148 IFSERDYLSKVDLRGLTPRETLVKDIMS--SKVITVSGDSGASKCLSIMTKRNIRHLPVL 205
Query: 172 DG-RIVGMISIVDVVRAVVEQQKGELKRL 199
D R++GM+SI D+V+ ++ +Q EL L
Sbjct: 206 DNKRLIGMLSIGDIVKYIISEQSQELNGL 234
>gi|156129382|gb|ABU50910.1| putative CBS domain protein [Pseudomonas sp. WBC-3]
Length = 146
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 11/151 (7%)
Query: 58 SVAEVLMTK--GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+VA++L K + KV S C + V DA+K MA NIG+L V++ G+ + GI +E
Sbjct: 3 TVAQLLKLKVMQNQKVHSINPC---EMVLDALKLMADKNIGALAVVENGQ---VVGIVSE 56
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RDY RK+V +GRS T V +IM + +IT+ ++ + H M +MT+ H+RH+PV+ DG
Sbjct: 57 RDYARKVVLKGRSSVGTPVRDIMN--SPVITVSANLCVEHCMTIMTESHLRHLPVVEDGE 114
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G++SI D+V+ +Q +++L +IRG
Sbjct: 115 LIGLLSIGDLVKEASVEQAELIRQLEHYIRG 145
>gi|375144377|ref|YP_005006818.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361058423|gb|AEV97414.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 145
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
N VA+VL+ KG + TV +A+ MA NIGS++VL+ G H GI TE
Sbjct: 2 NKKVADVLLRKG----SNITTVTPATTVLEALHIMADQNIGSVMVLEDG---HYLGIVTE 54
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V +G+S T+V+EIM+ N L + + ++ + MQLM+D++IR++PV D
Sbjct: 55 RDYSRKVVLKGKSSTDTKVSEIMS--NDLPRVTAHDSVDYCMQLMSDRNIRYLPVFDENE 112
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ G+ISI DVV+ + Q+ + +L +++
Sbjct: 113 VTGIISINDVVKETILSQQETITQLKDYLHS 143
>gi|304309718|ref|YP_003809316.1| hypothetical protein HDN1F_00660 [gamma proteobacterium HdN1]
gi|301795451|emb|CBL43649.1| CBS domain protein [gamma proteobacterium HdN1]
Length = 146
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L +K V S R D V DA+K M++ +G+L+V E + G+ +ERD
Sbjct: 3 NVRDILRSKPSAYVYS---VRPDSKVLDAIKLMSEKGVGALLV---TENDKVVGVISERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V RS V EIMT + +I++ ++ M+LMT+K IRH+PVI+ ++
Sbjct: 57 YARKVVLMARSSHQAEVREIMTAD--VISVDPTQSMESCMELMTEKRIRHLPVIENDELI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
GMISI D+V+ ++ QK +++L ++IRGE
Sbjct: 115 GMISIGDLVKNIISDQKFMIEQLQQYIRGE 144
>gi|284176977|gb|ADB81392.1| putative CBS domain protein [Pseudomonas sp. 1-7]
Length = 146
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 95/151 (62%), Gaps = 11/151 (7%)
Query: 58 SVAEVLMTK--GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+VA +L K + KV S C + V DA+K MA NIG+L V++ G+ + G+ +E
Sbjct: 3 TVAHLLKLKVMQNQKVHSIYPC---EMVLDALKLMADKNIGALAVVENGQ---VVGVVSE 56
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RDY RK+V +GRS T V +IM + +IT+ ++ + H M +MT+ H+RH+PV+ DG
Sbjct: 57 RDYARKVVLKGRSSVGTPVRDIMN--SPVITVSANLCVEHCMTIMTESHLRHLPVVEDGE 114
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G++SI D+V+ +Q +++L +IRG
Sbjct: 115 LIGLLSIGDLVKEASVEQAELIRQLEHYIRG 145
>gi|390568013|ref|ZP_10248325.1| signal-transduction protein [Burkholderia terrae BS001]
gi|389940016|gb|EIN01833.1| signal-transduction protein [Burkholderia terrae BS001]
Length = 144
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA+VL +K +V + D+V +A+K MA IG+L+V + G IAGI TERD
Sbjct: 3 SVAQVLKSKPTQEV---YTIEASDSVYNAIKLMADKQIGALIVKENGS---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RKIV RS K T V +IM+ + + D M LMT++ +RH+PV+D +++
Sbjct: 57 YARKIVLMDRSSKTTPVRDIMSSAVRFVR--PDQTTDECMALMTERRMRHLPVLDNEQLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
GM+SI D+V+ ++ +Q+ +++L +I
Sbjct: 115 GMVSIGDLVKTIIAEQQFTIQQLEHYI 141
>gi|190575499|ref|YP_001973344.1| hypothetical protein Smlt3640 [Stenotrophomonas maltophilia K279a]
gi|190013421|emb|CAQ47056.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 120
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 85/120 (70%), Gaps = 6/120 (5%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
DA++ MA+ IG+++V+ + + GI +ERDY RKIV + RS + T VAEIMT ++
Sbjct: 3 DAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT--TQV 57
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+T+ + H +QL+TD IRH+PV++G +++G+ISI D+V++V++ Q+ EL +L ++I
Sbjct: 58 VTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQVLGVISIGDLVKSVIDAQRRELDQLQQYI 117
>gi|56479475|ref|YP_161064.1| hypothetical protein ebA7121 [Aromatoleum aromaticum EbN1]
gi|56315518|emb|CAI10163.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 148
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 92/154 (59%), Gaps = 10/154 (6%)
Query: 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIF 113
+ ++V ++L TKG +V DA+ MA+H+IG+++V E H+ GIF
Sbjct: 1 MTTMTVRQILETKG----AGAHAVSPGVSVFDALAVMAKHDIGAVLVT---ENDHLTGIF 53
Query: 114 TERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID- 172
TERDY RK+V +G S K V E+MT IT PS + M +MT+ RH+PV++
Sbjct: 54 TERDYARKLVLKGLSSKEATVGELMTPNVCTIT-PSH-TVDEVMNIMTENRFRHLPVVER 111
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G+I G+++I DVV++++ QQ+ + L+ +I G+
Sbjct: 112 GKIAGIVTIGDVVKSIIVQQEETISHLSSYIAGD 145
>gi|399007025|ref|ZP_10709541.1| CBS domain-containing protein [Pseudomonas sp. GM17]
gi|398120982|gb|EJM10625.1| CBS domain-containing protein [Pseudomonas sp. GM17]
Length = 146
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 85/128 (66%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A++ MAQ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++G +++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQHSIERCMAVMTDSHLRHLPVLEGEQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRGE 206
L +IRG+
Sbjct: 139 LEHYIRGD 146
>gi|420254612|ref|ZP_14757606.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398048356|gb|EJL40830.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 144
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 9/147 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA+VL +K +V + + D+V +A+K MA IG+L+V + G IAGI TERD
Sbjct: 3 SVAQVLKSKPTQEVYT---IEASDSVYNAIKLMADKQIGALIVKENGA---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RKIV RS K T V +IM+ + + D M LMT++ +RH+PV+D +++
Sbjct: 57 YARKIVLMDRSSKTTPVRDIMSSAVRFVR--PDQTTDECMALMTERRMRHLPVLDNEQLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
GM+SI D+V+ ++ +Q+ +++L +I
Sbjct: 115 GMVSIGDLVKTIIAEQQFTIQQLEHYI 141
>gi|284107508|ref|ZP_06386389.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
gi|283829934|gb|EFC34215.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
Length = 144
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 85/129 (65%), Gaps = 6/129 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D+TV A++ MA+ IG+L+VL + + + GIF+ERDY RK++ QGRS T+++E+M
Sbjct: 21 DETVYKALQMMAEKEIGALLVL---DGEKVVGIFSERDYARKVILQGRSSANTKISELMI 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ +I D I +M +MT IRH+PVI +G++ GM++ D++ ++ +QK E++
Sbjct: 78 RD--VIYGSPDDPIQESMAIMTANKIRHLPVIEEGKLCGMVTSGDIINHIISRQKFEIEA 135
Query: 199 LNEFIRGEY 207
L ++I G Y
Sbjct: 136 LKKYITGGY 144
>gi|389684621|ref|ZP_10175949.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|388551844|gb|EIM15109.1| CBS domain protein [Pseudomonas chlororaphis O6]
Length = 146
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 84/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A++ MAQ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++G+ ++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQHSIERCMAVMTDSHLRHLPVLEGKQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|332662181|ref|YP_004444969.1| signal transduction protein with CBS domains [Haliscomenobacter
hydrossis DSM 1100]
gi|332330995|gb|AEE48096.1| putative signal transduction protein with CBS domains
[Haliscomenobacter hydrossis DSM 1100]
Length = 144
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K+ S R D V DA+ M+Q IG+++V+ ++ + GIF+ERDY RK + GR
Sbjct: 12 KINSVWSVRPDHMVIDALALMSQQGIGAVLVM---DEDQLIGIFSERDYARKGIIVGRKA 68
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAV 188
K T V E+MT + T+ D +I M L ++K IRH+PV++ +++GM+SI D+V A+
Sbjct: 69 KSTPVTEVMT--ANVFTVSPDMDIEDCMTLFSEKRIRHLPVMENQKVIGMLSIGDIVSAI 126
Query: 189 VEQQKGELKRLNEFIRGE 206
++ Q +++ L +I G+
Sbjct: 127 IQAQDQQIRYLEAYITGQ 144
>gi|18266206|gb|AAL67493.1|AF459408_1 senescence-associated putative protein, partial [Narcissus
pseudonarcissus]
Length = 109
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG I+ + + +LK A+L+H + ++ S S SS+ EE G E+ +V+
Sbjct: 1 MQGAIQAILSRGNVLKRAVLQHVR---IINPALQPSILSRSESVSSAQLEEHGFESTTVS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGI 112
+VL +KG GSWL C ++DTV DAVK+M QHN+G+LVV+KPGE++ IAGI
Sbjct: 58 DVLKSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEEKGIAGI 109
>gi|223938924|ref|ZP_03630810.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
gi|223892351|gb|EEF58826.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
Length = 149
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 86/127 (67%), Gaps = 6/127 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +AV+ MA+ N+G+L+V+ E + G+F+ERDY RK+V G+S + T V EI++
Sbjct: 26 TVYEAVEKMAEKNVGALLVM---ENDRLVGMFSERDYTRKVVLHGKSSRQTLVREIIS-- 80
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
+I++ D ++ AM++MT+ IRH+PVI+ ++VG++SI D+V ++ Q L ++
Sbjct: 81 RPVISVDPDCSVEEAMRIMTENRIRHLPVIESDQVVGVVSIGDLVNWMISAQHLALNQME 140
Query: 201 EFIRGEY 207
++I G+Y
Sbjct: 141 DYITGKY 147
>gi|118595092|ref|ZP_01552439.1| CBS [Methylophilales bacterium HTCC2181]
gi|118440870|gb|EAV47497.1| CBS [Methylophilales bacterium HTCC2181]
Length = 150
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 81/123 (65%), Gaps = 6/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ DA+ MAQ+ IG+L+V+K + + GI +ERDY R+I +GRS + T+V EIMT
Sbjct: 31 SIFDALTIMAQYKIGALIVMKGSK---MVGIISERDYAREIFIEGRSSRDTKVQEIMT-- 85
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLN 200
K++TL +D + +MT K IRH+PV+ G+ +VGM+S D+V+ ++ QK +K L
Sbjct: 86 KKVLTLSADDKFDKGLDIMTKKRIRHLPVMHGKELVGMVSQGDLVKEMIAYQKALIKELE 145
Query: 201 EFI 203
F+
Sbjct: 146 AFV 148
>gi|50085401|ref|YP_046911.1| hypothetical protein ACIAD2305 [Acinetobacter sp. ADP1]
gi|49531377|emb|CAG69089.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 143
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL K + V + D +V +A+ MA IG++VV+ E++ + GI +ERD
Sbjct: 3 NVAQVLNDKREHVVYT---ISPDASVLEAISLMADKGIGAIVVV---EKESVVGILSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+ RS T V+EIMT K+ T+ ++ +QLMTD+H+RH+PV++ +++
Sbjct: 57 YTRKVELMDRSSNSTVVSEIMT--PKVFTVDKSYSVEDCLQLMTDRHLRHLPVVEHDKLL 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+A +E+Q+ +++L ++I G
Sbjct: 115 GLISIGDLVKAAMEEQRQLIEQLKQYISG 143
>gi|403054435|ref|ZP_10908919.1| hypothetical protein AberL1_23541 [Acinetobacter bereziniae LMG
1003]
gi|445416078|ref|ZP_21434367.1| CBS domain protein [Acinetobacter sp. WC-743]
gi|444762514|gb|ELW86877.1| CBS domain protein [Acinetobacter sp. WC-743]
Length = 143
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 92/150 (61%), Gaps = 11/150 (7%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDD-TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+VA+V+ DK+G + S TV +A+ MA IG++VV E + GI +ER
Sbjct: 3 TVAQVI----QDKIGHEIYTISPSATVLEAITLMANKGIGAVVV---TEDTKVVGILSER 55
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
DY RKI R+ +T VAEIMT +K+I++ + + LMTD H+RH+PVI+ ++
Sbjct: 56 DYTRKIALMQRTSDHTTVAEIMT--SKVISVTRSHTVEQCLGLMTDGHLRHLPVIEAEKL 113
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
VG +SI D+V+A +E Q+ +++L ++I G
Sbjct: 114 VGFVSIGDLVKATMEDQRKLIEQLQQYISG 143
>gi|56478309|ref|YP_159898.1| hypothetical protein ebB175 [Aromatoleum aromaticum EbN1]
gi|56314352|emb|CAI08997.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 147
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA +L K D V + D +V DA+ MA+HN+G+L+V+ E + +AGI +ERD
Sbjct: 3 SVAAILKEKPDPTVHT---IGPDASVFDALGRMAEHNVGALLVM---EGERLAGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK++ RS + V+ IM+ ++L M LMT+K +RH+PV++ R+V
Sbjct: 57 YARKVILLARSSRDLTVSAIMSSPVMYVSLNQTNE--ECMALMTEKRLRHLPVVESSRVV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+++V +Q+ +++L +I G+
Sbjct: 115 GIVSIGDLVKSIVSEQRFIIEQLEHYIAGD 144
>gi|347538281|ref|YP_004845705.1| hypothetical protein NH8B_0456 [Pseudogulbenkiania sp. NH8B]
gi|345641458|dbj|BAK75291.1| CBS domain protein [Pseudogulbenkiania sp. NH8B]
Length = 151
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 87/127 (68%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV A++ MA+ N+G+++V+ + + GIF+ERDY R++V QGR+ T V EIMT
Sbjct: 22 DATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERDYARRVVLQGRTSAGTHVREIMT 78
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++++ + + + M LMT+K IRH+PV++G ++G++SI D+VRA +E+Q+ + +
Sbjct: 79 --SRVVYVTPEQTVDECMALMTEKRIRHLPVMEGCEVLGVVSIGDLVRATLEEQQLTIDQ 136
Query: 199 LNEFIRG 205
L +I+G
Sbjct: 137 LVHYIQG 143
>gi|416016195|ref|ZP_11563578.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|416027429|ref|ZP_11570676.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422407300|ref|ZP_16484299.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320324479|gb|EFW80556.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320328400|gb|EFW84403.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330882511|gb|EGH16660.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 146
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L E + G+ +ERDY RK++ +GRS T V EIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
NK+IT+ S ++ M +MTD H+RH+PV+ DGR++G++SI D+V+ + +Q +++
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGRLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|71735132|ref|YP_274691.1| hypothetical protein PSPPH_2494 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555685|gb|AAZ34896.1| CBS domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 146
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L E + G+ +ERDY RK++ +GRS T V EIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
NK+IT+ S ++ M +MTD H+RH+PV+ DGR++G++SI D+V+ + +Q +++
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGRLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|398922492|ref|ZP_10660300.1| CBS domain-containing protein [Pseudomonas sp. GM49]
gi|398162684|gb|EJM50870.1| CBS domain-containing protein [Pseudomonas sp. GM49]
Length = 146
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 83/127 (65%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ N+G+L V+ EQ + G+ +ERDY RK+V QGRS T V IM+
Sbjct: 24 DQMVLEALKLMAEKNVGALPVM---EQGQVVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++G +++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQAELIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|398945962|ref|ZP_10671970.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
gi|398155799|gb|EJM44231.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 85/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D+ V +A++ MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V +IM+
Sbjct: 24 DEMVLEALRIMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++ G ++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMAVMTDSHLRHLPVVEGGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|186472103|ref|YP_001859445.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184194435|gb|ACC72399.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 144
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA+VL +K +V + D+V +A+K MA IG+L+V + G IAGI TERD
Sbjct: 3 SVAQVLKSKPTQEV---YTIEATDSVYNAIKLMADKQIGALIVKENGA---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RKIV RS K T V +IM+ + + + M LMT++ +RH+PV++ R++
Sbjct: 57 YARKIVLMDRSSKTTPVRDIMSSAVRFVRPEQTTD--ECMALMTERRMRHLPVMENDRLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
GM+SI D+V+ ++ +Q+ +++L +I G
Sbjct: 115 GMVSIGDLVKNIIAEQQFTIQQLEHYIHG 143
>gi|393775714|ref|ZP_10364025.1| putative signal-transduction protein [Ralstonia sp. PBA]
gi|392717440|gb|EIZ05003.1| putative signal-transduction protein [Ralstonia sp. PBA]
Length = 146
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 93/150 (62%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA +L TK D V + R D V DA++ M++ +IG+++V+ E I GI TERD
Sbjct: 3 TVAAILQTKPDRTVHT---IRPDAPVFDAIRLMSEKSIGAVLVM---EGDEIVGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV RS K T V +IMT +I + + M LMT++ +RH+PV++ G+++
Sbjct: 57 YARKIVLMDRSSKSTPVRDIMT--RAVIYVGPQEDNERCMALMTERRLRHLPVLEHGKLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G+ISI D+V+ ++ +Q+ + +L +I GE
Sbjct: 115 GLISIGDLVKDIISEQQFIISQLESYITGE 144
>gi|330820198|ref|YP_004349060.1| putative signal-transduction protein [Burkholderia gladioli BSR3]
gi|327372193|gb|AEA63548.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
Length = 153
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 10/151 (6%)
Query: 58 SVAEVLMTKGDDKVGSWL-CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+VA +L +K D G + +D+V DA+K MA IG+LVV K GE I GI TER
Sbjct: 4 TVANILKSKPD--AGQTVHTIGKNDSVYDALKLMAIKGIGALVV-KEGED--IVGIVTER 58
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--R 174
DY RK+V RS K TR+ EIMT + + + PS+ + M LMT+ +RH+PV+D +
Sbjct: 59 DYARKVVLLERSSKDTRIEEIMTVKVRYVE-PSETSD-QCMALMTEHRMRHLPVLDKNRK 116
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++G+ISI D+V++V+ +Q+ +K+L +I G
Sbjct: 117 LIGVISIGDLVKSVIAEQQDTIKQLEHYIHG 147
>gi|398866658|ref|ZP_10622139.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398239725|gb|EJN25429.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 83/127 (65%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +AV+ MA+ N+G+L V++ G+ + G+ +ERDY RK+V GRS T V IM+
Sbjct: 24 DAMVLEAVQKMAEKNVGALPVIEKGQ---VVGVISERDYARKVVLLGRSSVGTPVRAIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ ++T S +I H M +MTD H+RH+PV+ +G ++G++SI D+V+ + +Q +++
Sbjct: 81 --SPVVTADSQQSIEHCMAVMTDSHLRHLPVVENGELIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
+IRG
Sbjct: 139 FEHYIRG 145
>gi|332527070|ref|ZP_08403152.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
gi|332111502|gb|EGJ11485.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
Length = 136
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 84/135 (62%), Gaps = 6/135 (4%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
G+ DD+V A++ +A H IG+L+V+ G + G+ +ERDY RK+ QGR+ +
Sbjct: 7 GTLWHVHPDDSVFAALELLAAHEIGALLVMDGGR---LVGVVSERDYTRKVALQGRNSRE 63
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVE 190
TRVAEIMT ++ +P A + M LM++ IRH+PV+DG ++GMIS+ D++ ++
Sbjct: 64 TRVAEIMT--RDVVRVPPAAPMHECMALMSEHRIRHLPVVDGSTVLGMISMRDLLDELIA 121
Query: 191 QQKGELKRLNEFIRG 205
+Q+ + L +I+
Sbjct: 122 EQERTIAELEHYIQS 136
>gi|409418943|ref|ZP_11258905.1| hypothetical protein PsHYS_07040 [Pseudomonas sp. HYS]
Length = 146
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 93/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L TK D V DA++ MA+ N+G+L V++ G + GI +ERD
Sbjct: 3 TVAQLLKTKAQQH-HQVHTIGPDHMVLDALRLMAEKNVGALPVVQDGR---VVGIVSERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +GRS T V+ IM+ +IT+ N+ + M +MT+ H+RH+PV+ +G ++
Sbjct: 59 YARKMVLKGRSSVGTPVSAIMS--APVITVDPHQNVEYCMNMMTNSHLRHLPVVENGELL 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q + +L ++IRG+
Sbjct: 117 GLLSIGDLVKEAIAEQANMILQLEQYIRGD 146
>gi|398949768|ref|ZP_10673432.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426409536|ref|YP_007029635.1| CBS domain-containing protein [Pseudomonas sp. UW4]
gi|398158878|gb|EJM47209.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426267753|gb|AFY19830.1| CBS domain-containing protein [Pseudomonas sp. UW4]
Length = 146
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 84/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V IM+
Sbjct: 24 DQMVYEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++G +++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMMVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|34499375|ref|NP_903590.1| hypothetical protein CV_3920 [Chromobacterium violaceum ATCC 12472]
gi|34105225|gb|AAQ61581.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 144
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 87/127 (68%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV A++ MA+++IG+++V++ G+ I GIF+ERDY R+IV QGR+ T+V +IMT
Sbjct: 22 DSTVFQALQVMAENDIGAVLVMESGD---IVGIFSERDYARRIVLQGRTSAGTKVRDIMT 78
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
++++ + + M LMT+K IRH+PV+ D ++G++SI D+VRA +E+Q+ +
Sbjct: 79 --SRVVYVTPQQTLDECMGLMTEKRIRHLPVMEDQTVLGILSIGDLVRATIEEQEQVINH 136
Query: 199 LNEFIRG 205
L +I+
Sbjct: 137 LVHYIQS 143
>gi|351729267|ref|ZP_08946958.1| signal-transduction protein [Acidovorax radicis N35]
Length = 145
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 93/150 (62%), Gaps = 9/150 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA++L +K D V + S V +A+K MA IG+L+ + E + IAGIFTERDY
Sbjct: 4 VAKILQSKPDAIVHTIAPGAS---VFEALKLMADKGIGALLAV---EGESIAGIFTERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RKI GR+ T+V ++MT ++ + D MQ+M++ +RH+PV++ G++VG
Sbjct: 58 ARKIALMGRTSAVTQVRDVMT--TSVLFVRPDQTSEQCMQIMSNNRLRHLPVVEGGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
MISI D+V+ ++ +QK +++L +I G +
Sbjct: 116 MISIGDLVKDIISEQKFIIEQLEHYITGTH 145
>gi|238024821|ref|YP_002909053.1| signal-transduction protein [Burkholderia glumae BGR1]
gi|237879486|gb|ACR31818.1| signal-transduction protein [Burkholderia glumae BGR1]
Length = 154
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 94/151 (62%), Gaps = 7/151 (4%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ +VA +L +K + + + D++V DA+K MA ++G+LVV E I GI TE
Sbjct: 2 STTVANILKSKPEAGRTVYTIGK-DESVYDALKLMAIKSVGALVVT---EGNDIVGIVTE 57
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RDY RK+V RS K TR+ EIMT + + + PS + M LMT+ +RH+PV+D G+
Sbjct: 58 RDYARKVVLLERSSKATRIEEIMTMKVRYVE-PSQTSD-QCMALMTEHRVRHLPVLDGGK 115
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+VG+ISI D+V++V+ Q+ + +L +I G
Sbjct: 116 LVGVISIGDLVKSVIADQQYMISQLEHYIHG 146
>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 120
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
+A++ + + N+G+LVV+ E + + GIFTERDY RK+V +GRS K T V +IMTD
Sbjct: 3 EALEVLEEKNLGALVVV--DESEKLIGIFTERDYARKVVLKGRSSKETYVRDIMTDSPVF 60
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
++ D +I + MQLMT+K IRH+PVI + + G+ISI D+V+ V+ + ++ L +I
Sbjct: 61 VS--PDTDIEYCMQLMTNKFIRHLPVIENNELTGIISIGDIVKHVISNKDFIIQHLEHYI 118
>gi|303279450|ref|XP_003059018.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460178|gb|EEH57473.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 243
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 21/176 (11%)
Query: 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE------- 105
GLE ++ ++L+ K D+ G WL + + +AV+ M + N+G+L+V++
Sbjct: 68 GLEKLTAGDLLLQKTLDQRGHWLWVDVNSSALEAVQRMTRANVGALLVMRERVLDVDDDG 127
Query: 106 ------------QQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANI 153
+AG+ TERDYL KIV + T+V ++MT ++++ D +
Sbjct: 128 VVTREEASSGKWDDAVAGVVTERDYLHKIVAKHGDASTTKVGDVMTAKDEINVASVDTPV 187
Query: 154 LHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
L AM+ M + RH+PV+ D + GM+ + DV R V+++ + E+ RL +++ G Y
Sbjct: 188 LEAMRAMIEGRHRHLPVMNKDRTMAGMLCMGDVTRMVLDEHRKEVVRLRDYMTGGY 243
>gi|395006914|ref|ZP_10390707.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394315102|gb|EJE51929.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 145
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA++L +K D V + R D+V A++ MA IG+LVV E I GIFTERDY
Sbjct: 4 VAKILQSKPDATVHT---IRPTDSVLSALQLMADKGIGALVVT---EGDAIVGIFTERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RKI GR+ T ++MT + + D + MQ+M+ +RH+PV++ G++VG
Sbjct: 58 ARKIALLGRTSAATLARDVMTTAVRFVR--PDQSSEQCMQIMSTGRLRHLPVVEGGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
MISI D+V+ ++ +QK +++L ++I G +
Sbjct: 116 MISIGDLVKDIISEQKFIIEQLEQYITGTH 145
>gi|387792257|ref|YP_006257322.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655090|gb|AFD08146.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 147
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V ++L KG+ + +++TV DA++++ + NIG+LVV G +HI GIFTER
Sbjct: 2 LKVKDILAKKGN----TVYTIDAEETVYDALEDLIEKNIGALVVTDHG--RHI-GIFTER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
DY RK++ +GR+ K TRV EIM+D + T P+D + M++MT +RH+PV D +
Sbjct: 55 DYARKVILKGRASKETRVREIMSD-HLFTTTPND-EVEECMEVMTCNRLRHLPVEDNFEL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VGMISI DVV+ ++E + + L IR
Sbjct: 113 VGMISIGDVVKHLIEVHEMIIDDLGHQIR 141
>gi|398993134|ref|ZP_10696090.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398135560|gb|EJM24673.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
Length = 146
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 84/127 (66%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ N+G+L V++ G+ + G+ +ERDY RK+V QGRS T V IM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++T S +I M +MTD H+RH+PV++G +++G++SI D+V+ + +Q +++
Sbjct: 81 --APVVTADSQQSIERCMVVMTDSHLRHLPVVEGDQLIGLLSIGDLVKEAIVEQADLIRQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LEHYIRG 145
>gi|381187230|ref|ZP_09894795.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
gi|379650840|gb|EIA09410.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
Length = 115
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 78/117 (66%), Gaps = 6/117 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
M + NIG+++V+ E + G+ +ERDY RKIV + +S K T V+EIM E +IT+
Sbjct: 1 MGEKNIGAVLVI---EDSLLKGVLSERDYARKIVLKDKSSKETLVSEIM--EGSVITVKP 55
Query: 150 DANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
N+ + M+LMT K +RH+PVI+ +VG+ISI DVV +++E QK +K L+ +I G
Sbjct: 56 TDNLEYCMELMTTKRVRHLPVIENNTVVGIISIGDVVISIIEVQKDTIKHLDSYISG 112
>gi|224827002|ref|ZP_03700100.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
gi|224600835|gb|EEG07020.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
Length = 151
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV A++ MA+ N+G+++V+ + + GIF+ERDY R++V QGR+ T V EIMT
Sbjct: 22 DATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERDYARRVVLQGRTSAGTHVREIMT 78
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
++++ + + + M LMT+K IRH+PV++G ++G++SI D+V A +E Q+ + +
Sbjct: 79 --SRVVYVTPEQTVDECMALMTEKRIRHLPVMEGCEVLGVVSIGDLVHATLEAQQLTIDQ 136
Query: 199 LNEFIRGE 206
L +I+GE
Sbjct: 137 LVHYIQGE 144
>gi|413962639|ref|ZP_11401866.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413928471|gb|EKS67759.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 168
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V +VL K D V + ++ +V +A+ M++ +G+LVV+ G+ + GI TERD
Sbjct: 3 TVKQVLKAKRDTTVHTI---DAEASVYEAIALMSRAEVGALVVVV-GDA--VCGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK++ Q + + T V EIMT ++L + A+ M LMT + IRH+PVI+G R+V
Sbjct: 57 YARKVILQDKVSRTTTVCEIMTAPVMSVSLGTSAD--ECMTLMTRQRIRHLPVIEGGRLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
GMISI D+VR ++E+Q+ + +L ++RG
Sbjct: 115 GMISIGDMVRHLIEEQQFAIDQLESYVRG 143
>gi|336322612|ref|YP_004602579.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
gi|336106193|gb|AEI14011.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
Length = 146
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 84/126 (66%), Gaps = 6/126 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A+K M+ +IG+L+V E ++ GIF+ERDY RK++ +G+S K +V++IMT +
Sbjct: 23 TVFEALKIMSDEDIGALIV---TEGDNVKGIFSERDYARKVILKGKSSKDLKVSDIMTTD 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
+T P + + M LMT+K IRH+PV++ ++ G++SI D+V+ V+ K +K L
Sbjct: 80 VLFVT-PKN-TVEECMALMTEKRIRHLPVLENKKLTGLVSIGDIVKQVISDHKFTIKELE 137
Query: 201 EFIRGE 206
++I G+
Sbjct: 138 KYISGD 143
>gi|347822266|ref|ZP_08875700.1| signal-transduction protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 147
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA++L +K D V + S V DA++ MA+ IG+L+V E I GI TERDY
Sbjct: 4 VAKILHSKPDPTVHTIAPTAS---VFDALERMAEKGIGALLV---TEGDAIVGILTERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RKIV GR+ T V + MT ++ + S MQLMT +RH+PV+D G++VG
Sbjct: 58 SRKIVLMGRTSAATLVRDAMT--TPVMFVRSSQTSEQCMQLMTTNRVRHLPVVDDGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
M+SI D+V+ ++ +QK +++L +I G
Sbjct: 116 MVSIGDLVKNIISEQKFIIEQLENYITG 143
>gi|262375222|ref|ZP_06068455.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|262309476|gb|EEY90606.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|407007547|gb|EKE23170.1| CBS protein [uncultured bacterium]
Length = 143
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL K + + R D TV +A+ MA IG+LVV + ++ GI +ERD
Sbjct: 3 NVAQVLSEKMHQAIYT---IRPDSTVLEAITLMADKGIGALVV---THEDNVVGILSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RKI R+ T V EIMT +K+IT+ + ++ + LMT++H+RH+PV++ +++
Sbjct: 57 YTRKIALMQRTSFDTTVNEIMT--SKVITVNTATSVEDCLSLMTERHLRHLPVVEHEKLI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+A ++ Q+ +++L ++I G
Sbjct: 115 GLISIGDLVKAAMDDQRKLIEQLQQYISG 143
>gi|381206976|ref|ZP_09914047.1| signal-transduction protein with cbs domains [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 143
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+SV ++L KG + + D +V DA+K M + NIG+++V+ E + + GIF+ER
Sbjct: 2 LSVRQMLSEKG----SAVVSITPDTSVFDALKVMNEKNIGAVLVM---EDEELVGIFSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
DY RK++ GRS K T V E+MT K+ + I M+LM + RHVPV++ ++
Sbjct: 55 DYARKVILAGRSSKITEVKELMT--CKVYCIDPSRTIQDVMELMNEHRFRHVPVMESKKV 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
+G++S DV+R VV +QK ++ L ++
Sbjct: 113 IGVLSSGDVMRGVVAEQKNTIESLESYL 140
>gi|384420129|ref|YP_005629489.1| hypothetical protein XOC_3226 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463042|gb|AEQ97321.1| CBS domain protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 142
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 83/130 (63%), Gaps = 6/130 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
SD V +A+ MA+ +G+++V+ + + GI +ERDY RK+V + RS T V
Sbjct: 16 FAVASDAAVIEAIGLMAEKAVGAVLVM---DGPRLVGIVSERDYARKVVLRDRSSSTTSV 72
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQK 193
AEIM+ E ++ PSD + MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+
Sbjct: 73 AEIMSAEVVTVS-PSD-TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQ 130
Query: 194 GELKRLNEFI 203
++ +L +I
Sbjct: 131 QDIDQLQRYI 140
>gi|257488025|ref|ZP_05642066.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|289646587|ref|ZP_06477930.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422679348|ref|ZP_16737622.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|298158422|gb|EFH99491.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|331008696|gb|EGH88752.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 146
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L E + G+ +ERDY RK++ +GRS T V EIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
NK+IT+ S ++ M +MTD H+RH+PV+ DG+++G++SI D+V+ + +Q +++
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|424055385|ref|ZP_17792908.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
gi|407438580|gb|EKF45123.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
Length = 138
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 90/148 (60%), Gaps = 14/148 (9%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA+V+ K + + + TV +A+ MA+ IG+LVV E + + GI +ERDY
Sbjct: 4 VAQVIKNKSEQAI---FTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
RK+ + VAEIMT K+IT+ + + +QLMTD+H+RH+PV+D ++VG
Sbjct: 58 TRKV-----TLMEPTVAEIMT--AKVITVGLNNTVEECLQLMTDRHLRHLPVLDNEKLVG 110
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+V+A +E QK +++L ++I G
Sbjct: 111 FISIGDLVKAAMEDQKVLIEQLKQYISG 138
>gi|332662391|ref|YP_004445179.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331205|gb|AEE48306.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
1100]
Length = 145
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 87/140 (62%), Gaps = 7/140 (5%)
Query: 68 DDKVGSWLCCRSDDT-VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG 126
D K+ S + S DT V A++ + +HNIG+L+V+ E + GIF+ERDY R+ + +G
Sbjct: 8 DRKLKSEILAVSPDTSVYSALEALEKHNIGALLVM---EGDKLVGIFSERDYARRGILKG 64
Query: 127 RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVV 185
+ + + V ++MT + + T+ A I + +MT+KH RH+PV+DG +++GMIS D+
Sbjct: 65 KFSRESFVKDLMT--SPVFTVSPQAKIEECLTIMTEKHFRHLPVVDGEKVLGMISSTDLF 122
Query: 186 RAVVEQQKGELKRLNEFIRG 205
R+++ Q + + L +I G
Sbjct: 123 RSILSQYQNLVSSLEGYISG 142
>gi|294667435|ref|ZP_06732652.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602768|gb|EFF46202.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 119
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
+A++ MA+ +G+++V+ E + GI +ERDY RK+V + RS T VAEIM+ E
Sbjct: 3 EAIRLMAEKAVGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVT 59
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
++ PSD + MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 60 VS-PSD-TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 117
>gi|373458680|ref|ZP_09550447.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
gi|371720344|gb|EHO42115.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
Length = 144
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 6/127 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A++ MA N+G+L+V+K G+ + GI +ERD RK+ +GR K T V +IMT
Sbjct: 23 TVLEALQKMADKNVGALLVVKDGQ---VKGIISERDCARKLDIKGRCAKDTPVKDIMTTH 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+ + + A AM +M +K IRH+PV D ++VG+ISI DVV+A++E QK +++L
Sbjct: 80 VLFLDISNTAE--EAMAIMINKRIRHLPVYEDKKLVGIISIGDVVKAIIEDQKFTIEQLE 137
Query: 201 EFIRGEY 207
+I G Y
Sbjct: 138 NYIMGTY 144
>gi|398980397|ref|ZP_10688956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
gi|398134600|gb|EJM23747.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
Length = 146
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM +IT+ + + + +M+DK +RH+PV+ DG+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--ANVITVDTHQTVDTCLGIMSDKRLRHLPVVEDGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRGE 146
>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 158
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA++L +K V + TV DAVK MA+ IG+L+V + GEQ + GI TERD
Sbjct: 15 SVADILKSKPQAVVHT---TTPSTTVFDAVKLMAEKGIGALLVTE-GEQ--LVGIVTERD 68
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+ RS + T V +IMT + + D M LMT+ +RH+PV+ DG+++
Sbjct: 69 YARKVALMSRSSRETPVRDIMTADVMFVR--PDQTSSECMALMTENRLRHLPVMADGKLL 126
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G+ISI D+V+ ++ +Q+ +++L +I GE
Sbjct: 127 GLISIGDLVKDIISEQRFIIEQLEHYITGE 156
>gi|160897815|ref|YP_001563397.1| signal-transduction protein [Delftia acidovorans SPH-1]
gi|333915885|ref|YP_004489617.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
gi|160363399|gb|ABX35012.1| putative signal-transduction protein with CBS domains [Delftia
acidovorans SPH-1]
gi|333746085|gb|AEF91262.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
Length = 146
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 91/152 (59%), Gaps = 10/152 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +K G+ D+V DA++ MA IG+L+V+ E IAGI TERD
Sbjct: 3 AVADILKSKAS---GAVYSIAPTDSVLDALRLMADKGIGALLVM---EGSEIAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRI 175
Y RKI GR+ T V ++MT + L P+ M +MT+ +RH+PV+D G++
Sbjct: 57 YARKIALLGRTSGATLVRDVMT-RDVLFVGPTQTT-QECMAVMTENRLRHLPVVDEGGKL 114
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
+G+ISI D+V+ ++ +QK +++L +I G +
Sbjct: 115 LGLISIGDLVKDIISEQKFIIEQLEHYISGRH 146
>gi|301631324|ref|XP_002944748.1| PREDICTED: uncharacterized protein At5g10860, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 146
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 10/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L +K + + C DD+V DA+K MA+ IG+L+V+ E Q I GI TERDY
Sbjct: 4 VSDILKSKPSNVIH---CLAPDDSVLDALKLMAEKGIGALLVM---EGQAIVGIVTERDY 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIV 176
RKI GR+ T V ++MT + L PS ++ M +MT +RH+PV+D G++
Sbjct: 58 ARKIALLGRTSAATLVRDVMT-RDVLYVRPSQSS-EECMAIMTSNRLRHLPVVDDAGQLQ 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+ ++ Q+ +++L +I G
Sbjct: 116 GLISIGDLVKDIISAQQFIIEQLQHYISG 144
>gi|70729700|ref|YP_259439.1| hypothetical protein PFL_2332 [Pseudomonas protegens Pf-5]
gi|68343999|gb|AAY91605.1| CBS domain protein [Pseudomonas protegens Pf-5]
Length = 146
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 85/125 (68%), Gaps = 6/125 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A+ MA+ N+G+L VL+ G + G+ +ERDY RK+V GRS T V+ IM+ +
Sbjct: 27 VLEALMVMAEKNVGALPVLENGV---VVGVISERDYARKLVLHGRSSVGTPVSAIMS--S 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+IT+ S ++ M +MTD H+RH+PV+ +G+++G++SI D+V+ + +Q +++L +
Sbjct: 82 PVITVDSHQSVDTCMNIMTDSHLRHLPVVENGQLLGLLSIGDLVKEAIAEQADLIRQLEQ 141
Query: 202 FIRGE 206
+IRGE
Sbjct: 142 YIRGE 146
>gi|358011810|ref|ZP_09143620.1| CBS domain pair family protein [Acinetobacter sp. P8-3-8]
Length = 143
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 90/149 (60%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+V+ K +V + TV A+ MA IG++VV + + + GI +ERD
Sbjct: 3 TVAQVIQDKAGQEVHT---ISPSATVLAAITLMANKGIGAVVVTQDSK---VVGILSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RKI R+ +T VAEIMT K+I++ + + LMTD H+RH+PV++G ++V
Sbjct: 57 YTRKIALMQRTSDHTTVAEIMT--PKVISVTPSHTVDDCLSLMTDGHLRHLPVMEGEKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G ISI D+V+A +E Q+ +++L ++I G
Sbjct: 115 GFISIGDLVKATMEDQRKLIEQLQQYISG 143
>gi|398989485|ref|ZP_10692726.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
gi|399015857|ref|ZP_10718114.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398107339|gb|EJL97341.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398147643|gb|EJM36346.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
Length = 146
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDEKVVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM +IT+ + + + +M+DK +RH+PV+ +G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--ANVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRGE 146
>gi|344338506|ref|ZP_08769438.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343801788|gb|EGV19730.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 143
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
Query: 67 GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG 126
GD W D +V DA+ MA+ IG+L+V+ G + G+ +ERDY R ++ +G
Sbjct: 9 GDKGSQVW-SIGPDASVYDALVLMAEKQIGALLVMDDGA---MIGLISERDYARSVILRG 64
Query: 127 RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
R+ K T V+++MT+ +++ + + AM LMT+K +RH+PVI DG+++G+ISI D++
Sbjct: 65 RTSKETLVSDVMTE--RVVCTQPEQTLEEAMALMTEKRVRHLPVIADGKVIGLISIGDLI 122
Query: 186 RAVVEQQKGELKRLNEFI 203
+++V + K +++L +I
Sbjct: 123 KSIVSEHKFIIEQLEHYI 140
>gi|399002176|ref|ZP_10704867.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
gi|398125432|gb|EJM14911.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
Length = 146
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A+ MA N+G+L VLK G+ + GI +ERDY RK+V +GRS T V++IM +
Sbjct: 27 VLEALMVMAAKNVGALPVLKDGK---VVGIISERDYARKLVLKGRSSVGTPVSDIMV--S 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+IT+ + + M +M+DK +RH+PV+ DG ++G++SI D+V+ + +Q +++L +
Sbjct: 82 PVITVDTHQTVETCMGIMSDKRLRHLPVVEDGELMGLLSIGDLVKEAIAEQAELIRQLEQ 141
Query: 202 FIRGE 206
+IRGE
Sbjct: 142 YIRGE 146
>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
Length = 222
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 15/148 (10%)
Query: 67 GDDKVGSWLCCRSDDTVE---------DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
GD KVG L + D+ + +A++ M IGS++V+ + + GIF+ERD
Sbjct: 62 GDKKVGEILEKKKDNEIVTVGEHELIINAIRKMVDKKIGSILVV--NSENKLKGIFSERD 119
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--I 175
YL K+ G S + + V ++MT K T+ SD L AM++MT K RH+PV+D I
Sbjct: 120 YLSKVNLAGLSSRESPVEQVMTKNVK--TIKSDTCTLDAMKIMTTKKFRHLPVVDNNKHI 177
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
+G++SI D++ +V QK +K L EFI
Sbjct: 178 IGVVSIQDLINSVHSNQKETIKYLREFI 205
>gi|91778034|ref|YP_553242.1| hypothetical protein Bxe_B2095 [Burkholderia xenovorans LB400]
gi|91690694|gb|ABE33892.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 164
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA++L +K +V S ++ +V DA+ MA +G+L+V G IAGI TERD
Sbjct: 3 SVAQLLRSKTSQRVWS---TQASASVYDAIAVMAHRQVGALIVAHEGR---IAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV RS ++T V +IM+ + I D M LMT+ IR++PVI G+++
Sbjct: 57 YARKIVLMDRSSRHTPVRDIMSTAVRYI--GPDQTTEECMALMTEHRIRYLPVITAGQVI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
GM+SI D+V+ ++ + + +++L +I G +
Sbjct: 115 GMVSIGDLVQNLIVEHEQTIQQLEHYIHGNGF 146
>gi|237653431|ref|YP_002889745.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624678|gb|ACR01368.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 148
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 89/150 (59%), Gaps = 10/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L KG ++ R D+V DA+ MAQ +IG ++V + + GIFTERD
Sbjct: 4 TVKQILEAKG----STFHAVRPTDSVFDALSLMAQFDIGCVLVT---DSDKLVGIFTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V +G + +V ++MT + L A+ M MT K RH+PV+ +G+++
Sbjct: 57 YARKVVLKGLVSRDVKVGDLMTPNPYTVGLTGTAD--DVMATMTAKRFRHIPVVEEGKVL 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G+++I D+V+++V Q + +K+L +I G+
Sbjct: 115 GIVTIGDMVKSIVTQHEKTIKQLESYIAGD 144
>gi|398872952|ref|ZP_10628224.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398201096|gb|EJM87986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+DK +RH+PV++G +++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVEGGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRGE 146
>gi|374372824|ref|ZP_09630485.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
gi|373234900|gb|EHP54692.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
Length = 144
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+ +L KG D + TV A++ MA+ NIGSLVV K GE + GI TERDY
Sbjct: 4 VSNILGRKGHDAI----SIPPATTVYRALELMAEKNIGSLVV-KEGE--NFLGIMTERDY 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVG 177
RK++ +G+ T V EIM+ + +T P D+ + M+LM+DK+IR++PV ID ++ G
Sbjct: 57 SRKVILKGKHSSDTTVEEIMSTDLPKVT-PEDS-VERCMELMSDKNIRYLPVFIDQQLAG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI DVV+ + QQK + L ++I
Sbjct: 115 IISISDVVKETILQQKETINHLQDYI 140
>gi|421505750|ref|ZP_15952685.1| signal-transduction protein [Pseudomonas mendocina DLHK]
gi|400343447|gb|EJO91822.1| signal-transduction protein [Pseudomonas mendocina DLHK]
Length = 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+ AEVL +K V S S+D++ D ++ MA+ +G+LVV+ G + GI +ERD
Sbjct: 3 TAAEVLRSKPYAYVYS---VDSEDSLVDGLRIMAEKGVGALVVMSGG---RLVGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y+RK+ S T+++ IMT +I++ ++ H M+LMT++ +RH+PV+ +G ++
Sbjct: 57 YVRKVALADLSVLETKISHIMT--RDVISVGPRDSVQHCMELMTERRLRHLPVLAEGELI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 115 GLLSIGDLVKDTIAEQANLIRQLEQYIRGE 144
>gi|325925784|ref|ZP_08187157.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
gi|325543841|gb|EGD15251.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
Length = 135
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ E + GI +ERDY RK+V + R+ T VAEIM+ E +T PS
Sbjct: 24 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVT-PS 79
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
D + MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 80 D-TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 133
>gi|422607452|ref|ZP_16679451.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
gi|330891093|gb|EGH23754.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 85/128 (66%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ M + NIG+L E + G+ +ERDY RK++ +GRS T V EIM+
Sbjct: 24 DQMVLDALRLMTEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
NK+IT+ S ++ M +MTD H+RH+PV+ DG+++G++SI D+V+ + +Q +++
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEDGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|346725849|ref|YP_004852518.1| hypothetical protein XACM_2967 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650596|gb|AEO43220.1| CBS domain protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 142
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ E + GI +ERDY RK+V + R+ T VAEIM+ E +T PS
Sbjct: 31 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVT-PS 86
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
D + MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 87 D-TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 140
>gi|77459957|ref|YP_349464.1| signal transduction protein [Pseudomonas fluorescens Pf0-1]
gi|77383960|gb|ABA75473.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E ++ GI +ERD
Sbjct: 3 TVAQLLKLK-DPKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDNVVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM +IT+ + + + +M+DK +RH+PV+ +G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--ANVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRGE 146
>gi|120610791|ref|YP_970469.1| hypothetical protein Aave_2114 [Acidovorax citrulli AAC00-1]
gi|120589255|gb|ABM32695.1| CBS domain containing membrane protein [Acidovorax citrulli
AAC00-1]
Length = 149
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 10/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +K +V D++ DA++ MA IG+L+V+ + + IAGI TERD
Sbjct: 3 AVADILRSKAHQEV---FTIAPSDSMLDALRLMADKGIGALLVM---DGERIAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRI 175
Y RK+ GR+ TRVA++MT + + + + LM++ +RH+PV+ DG +
Sbjct: 57 YARKVALLGRTSGDTRVADVMTRAVRFVRPAQTSG--QCLALMSENRLRHLPVVEEDGTL 114
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
VG+ISI D+V+ V+ +Q+ ++++ ++I G
Sbjct: 115 VGLISIGDLVKDVISEQQFIIEQMEQYITG 144
>gi|422595667|ref|ZP_16669953.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|330985970|gb|EGH84073.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 146
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L E + G+ +ERDY RK++ +GRS T V EIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
NK+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --NKVITVDSQQSVEACMGIMTDSHLRHLPVVEHGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|440744999|ref|ZP_20924299.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
gi|440373615|gb|ELQ10373.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
Length = 146
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +K+
Sbjct: 81 --SKVITVDSQRSVEACMSIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIKQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|407783415|ref|ZP_11130616.1| signal-transduction protein [Oceanibaculum indicum P24]
gi|407202140|gb|EKE72135.1| signal-transduction protein [Oceanibaculum indicum P24]
Length = 142
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L TKG D V V DA K +A+ IGS++V+ +++ IAGI +ERD
Sbjct: 3 VSDILKTKGADVVA----VPPSLPVSDAAKLLAEKRIGSVLVM---DREKIAGILSERDI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + +G + V+ +MT K++T D +I M+LMT RHVPV+ DGR+ G
Sbjct: 56 VRTLAAEGAACLDGPVSRLMT--AKVVTCRPDQSISDVMELMTSGRFRHVPVVADGRLAG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
MISI DVV+ +E+ + E++++ ++ G
Sbjct: 114 MISIGDVVKWRLEEAQEEVRQMAAYVSG 141
>gi|398922044|ref|ZP_10660088.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398929099|ref|ZP_10663757.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
gi|398163542|gb|EJM51697.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398167513|gb|EJM55573.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
Length = 146
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+D+ +RH+PV++G +++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVETCLGIMSDRRLRHLPVVEGGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRGE 146
>gi|398853662|ref|ZP_10610258.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
gi|398238902|gb|EJN24622.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
Length = 146
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 93/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM +IT+ + + + +M+DK +RH+PV+ +G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--ANVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRGE 146
>gi|340787171|ref|YP_004752636.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
gi|340552438|gb|AEK61813.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
Length = 151
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L TK + V + D V DA+K M+ ++G+L+V G+ I GI TERD
Sbjct: 8 TVAQILKTKQNQTVYT---IAPDAKVFDAIKMMSDKSVGALLVTVQGK---IVGIVTERD 61
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK++ +GRS T V++IMT + L D N M LMT+ +RH+P++ D ++V
Sbjct: 62 YARKMILKGRSSTDTSVSDIMTSSVMYVRL-DDTN-EQCMALMTENRLRHLPILDDDKLV 119
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+ ++ +Q+ +++L +I G
Sbjct: 120 GIISIGDLVKDIISEQQFIIQQLEHYIMG 148
>gi|146309135|ref|YP_001189600.1| signal-transduction protein [Pseudomonas mendocina ymp]
gi|145577336|gb|ABP86868.1| putative signal-transduction protein with CBS domains [Pseudomonas
mendocina ymp]
Length = 146
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 95/150 (63%), Gaps = 9/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+ AEVL K V S S+D++ D ++ MA+ +G+LVV+ G + GI +ERD
Sbjct: 3 TAAEVLRNKPYAYVYS---VDSEDSLVDGLRIMAEKGVGALVVMSGG---RLVGIVSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y+RK+ S T+++ IMT + +I++ ++ H M+LMT++ +RH+PV+ +G ++
Sbjct: 57 YVRKVALADLSVLETKISHIMTRD--VISVGPRDSVQHCMELMTERRLRHLPVLAEGELI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 115 GLLSIGDLVKDTIAEQANLIRQLEQYIRGE 144
>gi|420251570|ref|ZP_14754734.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398057451|gb|EJL49412.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 160
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA+ L +K V S + +V DA+ MA +G+L+V G +AGI TERD
Sbjct: 3 SVAQFLRSKDSQTVWS---THASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV RS + T V +IM+ E + ++ + M LMT+ IR++PVI G+++
Sbjct: 57 YARKIVLMDRSSRNTPVRDIMSTEVRHVSPQHTTD--ECMALMTEHRIRYLPVITAGQVI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
GM+SI D+++ ++ +Q+ +++L +I G +
Sbjct: 115 GMVSIGDLIKNLITEQEHTIRQLEHYIHGNSF 146
>gi|241767956|ref|ZP_04765497.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
gi|241360854|gb|EER57698.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
Length = 146
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +K D+ V DD+V DA++ MA IG+L+V+ E I GI TERD
Sbjct: 3 AVADILRSKRDNTVHR---IGPDDSVFDALQRMADKGIGALLVM---EGDAIVGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKI GR T V ++MT + + P+ + M LMT+ +RH+PV++ G++V
Sbjct: 57 YARKIALLGRKSSATLVRDVMT-ADVMYVQPAQTS-EECMALMTENRLRHLPVVEGGKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D+V+ ++ +QK +++L +I G
Sbjct: 115 GLISIGDLVKDIISEQKFIIEQLEHYITG 143
>gi|398842413|ref|ZP_10599596.1| CBS domain-containing protein [Pseudomonas sp. GM102]
gi|398105786|gb|EJL95861.1| CBS domain-containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 83/127 (65%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A++ MA+ NIG+L V++ G+ + GI +ERDY RK+V QGRS T V +IM+
Sbjct: 24 DQMVLEAIRVMAERNIGALPVVENGK---VIGIVSERDYARKMVLQGRSSAGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+IT+ + I M +MTD H+RH+PV++ ++G++SI D+V+A + +Q + +
Sbjct: 81 --FPVITVDARQRIEDCMGIMTDSHLRHLPVVENEELLGLLSIGDLVKAAIAEQTDLIHQ 138
Query: 199 LNEFIRG 205
L +IRG
Sbjct: 139 LESYIRG 145
>gi|426408540|ref|YP_007028639.1| signal transduction protein [Pseudomonas sp. UW4]
gi|426266757|gb|AFY18834.1| signal transduction protein [Pseudomonas sp. UW4]
Length = 146
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+DK +RH+PV++ G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVEGGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRGE 146
>gi|398967935|ref|ZP_10682143.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
gi|398144279|gb|EJM33124.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
Length = 146
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+DK +RH+PV+ +G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +K+L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIKQLEQYIRGE 146
>gi|398938330|ref|ZP_10667733.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
gi|398165878|gb|EJM53988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A+ MA N+G+L VL+ GE + GI +ERDY RK+V +GRS T V +IM +
Sbjct: 27 VLEALMVMAAKNVGALPVLRNGE---VVGIISERDYARKLVLKGRSSVGTPVEDIMV--S 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+IT+ + + M +M+DK +RH+PV+ +G+++G++SI D+V+ + +Q +++L +
Sbjct: 82 PVITVDTHQTVETCMGIMSDKRLRHLPVVENGQLIGLLSIGDLVKEAIAEQAELIRQLEQ 141
Query: 202 FIRGE 206
+IRGE
Sbjct: 142 YIRGE 146
>gi|359800655|ref|ZP_09303194.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
gi|359361356|gb|EHK63114.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
Length = 122
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 82/123 (66%), Gaps = 6/123 (4%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
+AVK MA+ +IG++VV++ + G+ TERDY RKIV Q RS + T+V EIMT E+
Sbjct: 3 EAVKTMAERSIGAVVVVE---GDVVLGMLTERDYARKIVLQDRSSRTTKVREIMT-ESVY 58
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
P+D H M +MT++H RH+PVID ++VG++SI D+V+ V+ +QK + L +I
Sbjct: 59 YVGPADTR-EHCMAMMTERHFRHLPVIDNDKLVGLLSIGDLVKDVMSEQKFIIHELERYI 117
Query: 204 RGE 206
GE
Sbjct: 118 TGE 120
>gi|422640856|ref|ZP_16704281.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
gi|330953245|gb|EGH53505.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
Length = 146
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +K+
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIKQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|83815791|ref|YP_446387.1| hypothetical protein SRU_2283 [Salinibacter ruber DSM 13855]
gi|294508324|ref|YP_003572382.1| hypothetical protein SRM_02509 [Salinibacter ruber M8]
gi|83757185|gb|ABC45298.1| CBS domain pair, putative [Salinibacter ruber DSM 13855]
gi|294344652|emb|CBH25430.1| putative CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 93/160 (58%), Gaps = 12/160 (7%)
Query: 53 GLENISVAEVLMTK---GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHI 109
GL + V +++ +K DD G+ L TV + + M ++GS+VV+ E I
Sbjct: 6 GLLDTRVKDIIQSKSALADD--GNVLTTSPTATVFECIGRMVDRDVGSIVVM---EGDAI 60
Query: 110 AGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVP 169
AG+FTER+Y++ I +GRS T V E+MT++ + T+ D + ++LMT RH+P
Sbjct: 61 AGLFTERNYMQSIALEGRSSDETEVQEVMTED--VATVRPDKPLEECLRLMTRLRCRHLP 118
Query: 170 VID--GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
V+D G ++G++SI D V+ +++ + E RL +++ G Y
Sbjct: 119 VVDEGGDLIGIVSIGDGVKQIIQTAQRETSRLRQYVTGTY 158
>gi|302186319|ref|ZP_07262992.1| CBS [Pseudomonas syringae pv. syringae 642]
Length = 146
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA+K MA+ NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGSVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVDACMGIMTDSHLRHLPVVEGGKLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|260219992|emb|CBA27084.1| Uncharacterized protein At5g10860, mitochondrial [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 164
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
GS DD+V A++ +A N+G+L+V+ + + GIF+ERDY RKI GRS K
Sbjct: 35 GSVWSLNPDDSVYQALEMLADCNVGALMVM---DGDKLVGIFSERDYTRKIALSGRSSKD 91
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVE 190
T+V +IMT ++++ + M LM+ K IRH+PV+DG +++GMISI D++ +++
Sbjct: 92 TKVKDIMT--SQVMVVGPKTRTQECMALMSQKKIRHLPVVDGTKVLGMISIRDLMDDIIK 149
Query: 191 QQKGELKRLNEFI 203
+ + +L +I
Sbjct: 150 DHEQTISQLQSYI 162
>gi|326317834|ref|YP_004235506.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374670|gb|ADX46939.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 149
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 10/150 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L +K +V D++ DA++ MA IG+L+V+ + + IAGI TERD
Sbjct: 3 AVADILRSKAHQEV---FTIAPSDSMLDALRLMADKGIGALLVM---DGKSIAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRI 175
Y RK+ GR+ TRVA++MT + + + + LM++ +RH+PV+ DG +
Sbjct: 57 YARKVALLGRTSGDTRVADVMTRAVRFVRPVQTSG--QCLALMSENRLRHLPVVEEDGTL 114
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
VG+ISI D+V+ V+ +Q+ ++++ ++I G
Sbjct: 115 VGLISIGDLVKDVISEQQFIIEQMEQYITG 144
>gi|78048738|ref|YP_364913.1| hypothetical protein XCV3182 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037168|emb|CAJ24913.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 142
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ E + GI +ERDY RK+V + R+ T VAEIM+ E ++ PS
Sbjct: 31 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVS-PS 86
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
D + MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 87 D-TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 140
>gi|398862863|ref|ZP_10618448.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398249805|gb|EJN35181.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKMK-DPKNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VVGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+DK +RH+PV+ +G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SNVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRGE 146
>gi|66045596|ref|YP_235437.1| hypothetical protein Psyr_2360 [Pseudomonas syringae pv. syringae
B728a]
gi|422675469|ref|ZP_16734813.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
gi|63256303|gb|AAY37399.1| CBS [Pseudomonas syringae pv. syringae B728a]
gi|330973187|gb|EGH73253.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
Length = 146
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA+K MA+ NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQANLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|398955427|ref|ZP_10676421.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|398151033|gb|EJM39596.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
Length = 146
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+D+ +RH+PV++ G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDRRLRHLPVVEGGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRGE 146
>gi|294508543|ref|YP_003572602.1| hypothetical protein SRM_02729 [Salinibacter ruber M8]
gi|294344872|emb|CBH25650.1| CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 50 EEKGLENISVAEVLMTKGD-DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQH 108
+E+ L V +VL TKG + G L DTV D + M IGS+V+ E
Sbjct: 2 DERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYDCIDAMVDRGIGSIVIT---EDDE 58
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ GIFTERDY+R I +GRS T V E+MT++ ++T ++ + + M D RH+
Sbjct: 59 MVGIFTERDYMRDIALKGRSSPETEVQEVMTED--VVTAEAEDQLRDCLDRMNDLQCRHL 116
Query: 169 PVID--GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
PV+D G + +IS+ D + V E + +L ++ G+Y
Sbjct: 117 PVVDDEGNLADIISMRDCAKQVAESAESGATQLVNYVTGQY 157
>gi|398880462|ref|ZP_10635507.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398886794|ref|ZP_10641650.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398994575|ref|ZP_10697474.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|407363979|ref|ZP_11110511.1| signal transduction protein [Pseudomonas mandelii JR-1]
gi|398131896|gb|EJM21192.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398188021|gb|EJM75340.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398192664|gb|EJM79804.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+D+ +RH+PV+ +G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDRRLRHLPVVENGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRGE 146
>gi|398895284|ref|ZP_10647130.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
gi|398181076|gb|EJM68648.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
Length = 146
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 94/150 (62%), Gaps = 7/150 (4%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L K D K + D V +A+ MA+ N+G+L+V+ E + GI +ERD
Sbjct: 3 TVAQLLKLK-DQKNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RK+V GRS T V +IM + +IT+ + + + +M+DK +RH+PV+ +G+++
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMV--SPVITVDTHQTVDTCLGIMSDKRLRHLPVVENGKLI 116
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
G++SI D+V+ + +Q +++L ++IRGE
Sbjct: 117 GLLSIGDLVKEAIAEQAELIRQLEQYIRGE 146
>gi|390572107|ref|ZP_10252332.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
gi|389935895|gb|EIM97798.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
Length = 160
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA+ L +K V S + +V DA+ MA +G+L+V G +AGI TERD
Sbjct: 3 SVAQFLRSKDSQTVWS---THASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV RS + T V +IM+ E + + + M LMT+ IR++PVI G+++
Sbjct: 57 YARKIVLMDRSSRNTPVRDIMSTEVRHVGPQHTTD--ECMALMTEHRIRYLPVITAGQVI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
GM+SI D+++ ++ +Q+ +++L +I G +
Sbjct: 115 GMVSIGDLIKNLITEQEHTIRQLEHYIHGNSF 146
>gi|381196126|ref|ZP_09903468.1| hypothetical protein AlwoW_02540 [Acinetobacter lwoffii WJ10621]
Length = 143
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 97/150 (64%), Gaps = 11/150 (7%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDD-TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+VA+VL DKV + S + TV +A+ MA IG+LVV +++ + GI +ER
Sbjct: 3 NVAQVL----KDKVHQAIYTISPEATVLEAISLMADKGIGALVV---TQEERVVGILSER 55
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
DY+RK++ R+ K T V EIMT K++T+ + + + LMTD+H+RH+PV++ ++
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT--AKVLTVTTAVTVEECLDLMTDRHLRHLPVVEQDKL 113
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+G+ISI D+V+A ++ QK +++L ++I G
Sbjct: 114 LGLISIGDLVKAAMDDQKKLIEQLQQYISG 143
>gi|91789393|ref|YP_550345.1| signal-transduction protein [Polaromonas sp. JS666]
gi|91698618|gb|ABE45447.1| putative signal-transduction protein with CBS domains [Polaromonas
sp. JS666]
Length = 146
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 91/148 (61%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA++L +K D KV + V DAVK MA+ N+G+L+VL GE+ GI +ERD
Sbjct: 4 VAQILKSKADHKVYT---VSPLAPVLDAVKLMAEKNLGALLVLD-GEE--FVGIISERDC 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RK++ R P+ T V +IM+ + + P N M LMTDK +RH+PVID G+++G
Sbjct: 58 TRKMLLADRLPRETPVRDIMSSPVQYVG-PRHTN-EECMALMTDKRLRHLPVIDNGKLIG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
++SI D+V+ ++ +Q +++L +I G
Sbjct: 116 LVSIGDLVKDIISEQGFIIQQLEHYIAG 143
>gi|83814945|ref|YP_446606.1| hypothetical protein SRU_2508 [Salinibacter ruber DSM 13855]
gi|83756339|gb|ABC44452.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 175
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 43 SSSSSPT-EEKGLENISVAEVLMTKGD-DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVV 100
SS++ P +E+ L V +VL TKG + G L DTV + + M IGS+V+
Sbjct: 9 SSNALPAMDERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYECIDAMVDRGIGSIVI 68
Query: 101 LKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLM 160
E + GIFTERDY+R I +GRS T V E+MT++ ++T ++ + + M
Sbjct: 69 T---EDDEMVGIFTERDYMRDIALKGRSSPETEVQEVMTED--VVTAEAEDQLRDCLDRM 123
Query: 161 TDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
D RH+PV+D G + +IS+ D + V E + +L ++ G+Y
Sbjct: 124 NDLQCRHLPVVDDEGNLADIISMRDCAKQVAESAESGATQLVNYVTGQY 172
>gi|21243772|ref|NP_643354.1| hypothetical protein XAC3045 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109361|gb|AAM37890.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 142
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ E + GI +ERDY RK+V + RS T VA+IM+ E ++T+
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSGE--VVTVSP 85
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 86 SETVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 140
>gi|418519453|ref|ZP_13085505.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704897|gb|EKQ63376.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 145
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ E + GI +ERDY RK+V + RS T VA+IM+ E ++T+
Sbjct: 34 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAE--VVTVSP 88
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 89 SETVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 143
>gi|381169714|ref|ZP_09878877.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|390990846|ref|ZP_10261124.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|418518832|ref|ZP_13084964.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|372554389|emb|CCF68099.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|380689732|emb|CCG35364.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|410702120|gb|EKQ60630.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 142
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ E + GI +ERDY RK+V + RS T VA+IM+ E ++T+
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAE--VVTVSP 85
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 86 SETVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 140
>gi|398903957|ref|ZP_10651979.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398176386|gb|EJM64105.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A+ MA N+G+L VLK G+ + GI +ERDY RK+V +GRS T V++IM +
Sbjct: 27 VLEALMVMAAKNVGALPVLKDGK---VVGIISERDYARKLVLKGRSSVGTPVSDIMV--S 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+IT+ + + M +M++K +RH+PV+ +G ++G++SI D+V+ + +Q +++L +
Sbjct: 82 PVITVDTHQTVETCMGIMSEKRLRHLPVVENGELIGLLSIGDLVKEAIAEQAELIRQLEQ 141
Query: 202 FIRGE 206
+IRGE
Sbjct: 142 YIRGE 146
>gi|187924051|ref|YP_001895693.1| hypothetical protein Bphyt_2066 [Burkholderia phytofirmans PsJN]
gi|187715245|gb|ACD16469.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 163
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SVA+ L +K V S ++ +V DAV MA +G+L+V+ G +AGI TERD
Sbjct: 3 SVAQFLRSKASQTVWS---TQASTSVYDAVAIMAHRRVGALIVVHEGR---VAGIVTERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
Y RKI RS + T V +IM+ + + P M LMT+ IR++PVI +G+++
Sbjct: 57 YARKIALMHRSSRNTPVRDIMSTTVRYVG-PGQTT-EECMALMTEYRIRYLPVITEGQVI 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
GM+SI D+++ ++ +Q+ +++L +I G
Sbjct: 115 GMVSIGDLIKNLIAEQEDTIRQLEHYIHG 143
>gi|414872652|tpg|DAA51209.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 196
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 36/149 (24%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQ ++ VR+ +LK A+L+H SRF +S SS+ E++G E +VA
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRF---MSVSSARLEDRGFETATVA 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKN------------------------------- 89
+VL +KG GSWL C ++D+V DAVK+
Sbjct: 58 DVLKSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNF 117
Query: 90 --MAQHNIGSLVVLKPGEQQHIAGIFTER 116
M QHN+G+LVV+KPG+ + IAGI TER
Sbjct: 118 LQMTQHNVGALVVVKPGQNKSIAGIVTER 146
>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
Length = 143
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
Query: 67 GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG 126
D K L D V DA+ MA++ IG+L+V+ ++ + GI +ERDY R+IV +G
Sbjct: 9 NDKKHNDILSVEPDRPVIDALIIMAEYKIGALLVM---QKNKLLGIISERDYAREIVLKG 65
Query: 127 RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
+S K + E+MT +IT+ ++ +++MT+ HIRH+PVI + ++VGM+S+ D+
Sbjct: 66 KSSKECLIEEVMT--KNVITIDANDTYDKGLEIMTENHIRHLPVIENNKVVGMLSLGDLA 123
Query: 186 RAVVEQQKGELKRLNEFIRG 205
+ + Q+ + +L FI+
Sbjct: 124 KETITHQRFLIDQLESFIKS 143
>gi|422647303|ref|ZP_16710432.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330960846|gb|EGH61106.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 146
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A++ MA+ NIG+L + + G+ +ERDY RK+V +GRS T V+EIM+
Sbjct: 24 DQMVLEALRLMAEKNIGAL---PVVKDGVVVGVVSERDYARKMVLKGRSSVGTPVSEIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S + M +MTD H+RH+PV+ +G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQQTVETCMGIMTDSHLRHLPVVENGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 142
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A+K +A + +G+L V++ G+ +AGI +ERDY RK+ G++ K T VA+IMT +
Sbjct: 23 TVFEALKLLANYGVGALTVMENGK---LAGIVSERDYTRKVALMGKNSKETTVADIMTRD 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
+IT+ + M LM+ K IRH+PV+DG +VG+ISI D++ ++ Q+ + +L
Sbjct: 80 --VITVTPNTGTHACMALMSQKKIRHLPVLDGAEVVGLISIRDLMDDIIADQEQTISQLT 137
Query: 201 EFIRG 205
+I
Sbjct: 138 SYINS 142
>gi|283779970|ref|YP_003370725.1| signal transduction protein with CBS domains [Pirellula staleyi DSM
6068]
gi|283438423|gb|ADB16865.1| putative signal transduction protein with CBS domains [Pirellula
staleyi DSM 6068]
Length = 145
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKP-GEQQHIAGIFTE 115
+ V ++L TKG + L C+ DT+ V+ + ++NIGSLVV + ++Q + GI TE
Sbjct: 1 MQVRDILQTKG----SAVLTCQPGDTLARVVELLVRYNIGSLVVRESKADRQPMLGIITE 56
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R 174
RD LR + + + T VA+ MT + I SD + HAM LMT+ IRH+PVIDG +
Sbjct: 57 RDLLRFAAEKRGTLENTFVADRMT-RDPYICHASD-ELHHAMGLMTEHRIRHLPVIDGDQ 114
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
IVG+ISI D+V+A Q EL R N +++
Sbjct: 115 IVGIISIGDIVKA----QHDELSRENHYLK 140
>gi|262370497|ref|ZP_06063823.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
gi|262314839|gb|EEY95880.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
Length = 143
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 11/150 (7%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDD-TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+VA+VL DKV + S + TV +A+ MA IG+LVV ++ + GI +ER
Sbjct: 3 NVAQVL----KDKVHQAIYTISPEATVFEAISLMADKGIGALVV---THEERVVGILSER 55
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
DY+RK++ R+ K T V EIMT K++T+ + + + LMTD+H+RH+PV++ ++
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT--AKVLTVTTAVTVEECLDLMTDRHLRHLPVVEQDKL 113
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+G+ISI D+V+A ++ QK +++L ++I G
Sbjct: 114 LGLISIGDLVKAAMDDQKKLIEQLQQYISG 143
>gi|443644060|ref|ZP_21127910.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
gi|443284077|gb|ELS43082.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
Length = 146
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|386817222|ref|ZP_10104440.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
gi|386421798|gb|EIJ35633.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
Length = 142
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 93/149 (62%), Gaps = 10/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
++++VL KG + R V +AVK MA+ +G+L+VL G+ + GI +E+D
Sbjct: 3 TISQVLARKGSEVYSVAPAAR----VIEAVKTMAEKRVGALLVLDNGK---LKGIISEQD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV + R ++ RV E MT + ++ + + +I M +MTDK IRH+PV+ G ++
Sbjct: 56 YTRKIVLRDRIAEHLRVDEAMT--SPVVCITPEHSIQDGMAIMTDKRIRHLPVMAGGELL 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI D+V+ V+ +Q+ + +L ++I+G
Sbjct: 114 GLVSIGDLVKEVISEQQFMIDQLVQYIQG 142
>gi|398858831|ref|ZP_10614516.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238236|gb|EJN23969.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 83/125 (66%), Gaps = 6/125 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A+ MA N+G+L VLK G+ + GI +ERDY RK+V +GRS T V++IM
Sbjct: 27 VLEALMVMAAKNVGALPVLKEGK---VVGIISERDYARKLVLKGRSSVGTPVSDIMV--A 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+IT+ + + M +M++K +RH+PV+ +G ++G++SI D+V+ + +Q +++L +
Sbjct: 82 PVITVDTHQTVETCMGIMSEKRLRHLPVVENGELIGLLSIGDLVKEAIAEQAELIRQLEQ 141
Query: 202 FIRGE 206
+IRGE
Sbjct: 142 YIRGE 146
>gi|398840754|ref|ZP_10597986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398109766|gb|EJL99682.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 83/125 (66%), Gaps = 6/125 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A+ MA N+G+L VLK G+ + GI +ERDY RK+V +GRS T V++IM
Sbjct: 27 VLEALMVMAAKNVGALPVLKEGK---VVGIISERDYARKLVLKGRSSVGTPVSDIMV--A 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+IT+ + + M +M++K +RH+PV+ +G ++G++SI D+V+ + +Q +++L +
Sbjct: 82 PVITVDTHQTVETCMGIMSEKRLRHLPVVENGELIGLLSIGDLVKEAIAEQAELIRQLEQ 141
Query: 202 FIRGE 206
+IRGE
Sbjct: 142 YIRGE 146
>gi|325914102|ref|ZP_08176455.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
gi|325539605|gb|EGD11248.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
Length = 135
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ + + + GI +ERDY RK+V + RS T VAEIM+ ++++T+
Sbjct: 24 MAERGIGAVLVM---DGERLVGIVSERDYARKVVLRDRSSATTSVAEIMS--SQVVTVSP 78
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ MQLMTD RH+PV+ +GR+ +ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 79 SETVERCMQLMTDGRFRHLPVVENGRVQSVISIGDLVKAVIEAQQQDIDQLQRYI 133
>gi|440719396|ref|ZP_20899825.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440725046|ref|ZP_20905318.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
gi|440368228|gb|ELQ05273.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440369031|gb|ELQ06025.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
Length = 146
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|66803685|ref|XP_635678.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
gi|60463995|gb|EAL62158.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
Length = 228
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 49 TEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQH 108
T+ K ++ V ++ K + +G + ++TV +A+K M +G+ +V+
Sbjct: 74 TKLKSYKDTQVGAIIEEKIRNNLGRMVKVGENETVYNAIKVMNDKKVGATIVV--DRNNR 131
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ GIF+ERDYL K+ +G SPK T V ++ T + +IT+ SD+ + +M+ ++IRH+
Sbjct: 132 MCGIFSERDYLSKVDLRGLSPKETLVKDVCTKQ--IITVSSDSGATKCLSIMSKRNIRHL 189
Query: 169 PVIDG-RIVGMISIVDVVRAVVEQQKGELKRLNEFIRGE 206
PVI+ R++GM+SI D+V+ ++ Q E+ L I E
Sbjct: 190 PVIENKRLLGMLSIGDIVKYIISSQSIEINELKSDIDKE 228
>gi|422620669|ref|ZP_16689345.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
gi|330901025|gb|EGH32444.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
Length = 146
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 86/128 (67%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA+ NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDTHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|410090838|ref|ZP_11287422.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
gi|409761880|gb|EKN46924.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
Length = 146
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 84/128 (65%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA++ MA+ NIG+L E + G+ +ERDY RK++ +GRS T V+ IM+
Sbjct: 24 DHMVLDALRLMAEKNIGAL---PVVENGVVVGVMSERDYARKMILKGRSSVGTPVSAIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S + M +MTD H+RH+PV+ +G ++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQQTVEACMGIMTDSHLRHLPVVENGELLGLLSIGDLVKEAINEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|358638453|dbj|BAL25750.1| hypothetical protein AZKH_3461 [Azoarcus sp. KH32C]
Length = 151
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+ MA+ +IGS++V+ E + + GIFTERDY RK+ +G + + V ++MT
Sbjct: 28 SVLDALTLMAKQDIGSVLVI---ENERLVGIFTERDYARKLALKGLTSRDATVGDLMTP- 83
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLN 200
+ T+ I M +MT+ RH+PV++ GRI G+++I DVV+AV++ Q+ + L+
Sbjct: 84 -NVCTVTPTHTIEAVMNIMTENRFRHLPVVEHGRIAGIVTIGDVVKAVIDLQEKTINHLS 142
Query: 201 EFIRGE 206
+I G+
Sbjct: 143 NYIAGD 148
>gi|304322067|ref|YP_003855710.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
gi|303300969|gb|ADM10568.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
Length = 144
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ +A++ +A NIG++VV PG + +AGI +ERD +R + G + + V +IMT E
Sbjct: 22 SLAEAIEVLASKNIGAVVVTSPG--KAVAGILSERDVVRVLSGAPTGFRESPVTDIMTRE 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLN 200
+ T +A++ + LMTD+ IRHVP++DG +VG++SI DVV+ + Q GE L
Sbjct: 80 --VFTAGLEASVDQLLDLMTDRRIRHVPIVDGDGLVGLLSIGDVVKCRIRQAVGEADALK 137
Query: 201 EFI 203
E+I
Sbjct: 138 EYI 140
>gi|422667633|ref|ZP_16727495.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330979504|gb|EGH78107.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 146
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 85/128 (66%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLEALKLMADKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|281202067|gb|EFA76272.1| hypothetical protein PPL_10033 [Polysphondylium pallidum PN500]
Length = 240
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
DTV +A++ M +H +G+LVV+ + + GIF+ERDY+ +IV + S + T + ++M+
Sbjct: 109 DTVFNAIQTMQKHKVGALVVV--DAENRMTGIFSERDYMNRIVVKDLSSRTTYIKDVMSP 166
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRL 199
++T+ +D + M +M + RH+PV++G ++VG++SI D+V+ ++ Q+ E+ L
Sbjct: 167 H--VVTVRTDTSTAKCMSIMIKRGFRHLPVVEGEKLVGILSIGDLVKHIISDQRSEINHL 224
Query: 200 NEFIRGEY 207
+ + G Y
Sbjct: 225 KQRLGGSY 232
>gi|350561255|ref|ZP_08930094.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781362|gb|EGZ35670.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 142
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 91/148 (61%), Gaps = 14/148 (9%)
Query: 59 VAEVLMTKGDD--KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
V EVL KG D +G + +V +A++ MA H +G+L VL+ G + G+ +ER
Sbjct: 4 VREVLNDKGHDVYSIGP------EASVFEALRLMADHEVGALPVLENG---RLVGLISER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
DY RK++ RS + T V EIM ++ + + + M LMTDK +RH+PV++ G++
Sbjct: 55 DYARKVILMDRSSRNTPVREIMM--LRVTCVEPERTVEECMALMTDKRVRHLPVLEHGQL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI D+V+A++++Q+ + +L +I
Sbjct: 113 VGLVSIGDLVKAIIDEQQFIISQLEHYI 140
>gi|422633526|ref|ZP_16698662.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
gi|330943885|gb|EGH46119.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
Length = 146
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 85/128 (66%), Gaps = 6/128 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +A+K MA NIG+L E + G+ +ERDY RK+V +GRS T V +IM+
Sbjct: 24 DQMVLEALKLMADKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+K+IT+ S ++ M +MTD H+RH+PV++ G+++G++SI D+V+ + +Q +++
Sbjct: 81 --SKVITVDSQRSVEACMGIMTDSHLRHLPVVEGGQLLGLLSIGDLVKEAIAEQASLIQQ 138
Query: 199 LNEFIRGE 206
L ++IRGE
Sbjct: 139 LEQYIRGE 146
>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 153
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ C+ DDTV DA + MA+++IGS+VV+ ++ I GI TE D +R++V +G P T V
Sbjct: 23 ITCKPDDTVVDAARKMAKYSIGSVVVVD--DKGTILGILTEGDIVRRVVARGLDPSRTLV 80
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVR 186
++MT +T+ SDA + A + M K I H+PV++ GR+VG+I+ D+VR
Sbjct: 81 RDVMT--TNPVTIYSDATLAAAAEYMKRKGIGHLPVVNEQGRLVGIITKTDIVR 132
>gi|440730614|ref|ZP_20910694.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
gi|440378204|gb|ELQ14832.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
Length = 142
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK G D V DA++ MA IG+++V++ G +AGI +ERDY RK+V Q RS
Sbjct: 10 DKGGEIHAVAPDAAVVDALRLMADKGIGAVLVMQDG---RLAGILSERDYARKVVLQDRS 66
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGM-ISIVDVVRA 187
T V +IM+ K+ T+ ++ M+LMT + IRH+PV+ V ISI D+V+A
Sbjct: 67 SATTPVRDIMS--TKVYTVDPSQSVQQCMELMTGQRIRHLPVVQAGAVVGVISIGDLVKA 124
Query: 188 VVEQQKGELKRLNEFI 203
V+E+Q+ EL +L +I
Sbjct: 125 VIEEQQRELDQLQRYI 140
>gi|357491601|ref|XP_003616088.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517423|gb|AES99046.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG ++ + + ++K A+L+ + SRF S++ + EE G E+ +++
Sbjct: 1 MQGGLRSFLSDRNVIKNAVLQRVCMVNPLLQPVAFSRFE---SATPARIEEHGFESTTIS 57
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
++L KG GS L C +DDTV DAVK+M Q+N G+LVV+KPGE++ IAGI TER+
Sbjct: 58 DILQGKGKGADGSRLWCTTDDTVYDAVKSMTQNNAGALVVVKPGEEKSIAGIITERE 114
>gi|254467032|ref|ZP_05080443.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206687940|gb|EDZ48422.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 85/139 (61%), Gaps = 6/139 (4%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
D K G+ + V DA+K MA+ ++GS++V+ G+ +AGIFTER Y RK+ G+
Sbjct: 9 DAKGGTLHTLPPEAMVVDALKLMAEEDVGSVLVMSGGK---LAGIFTERHYTRKVFLAGK 65
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
+ T +A++M + + A M +M +KH+RH+PV+ DG + G++SI D+++
Sbjct: 66 TSPTTPLADVMATDFYGVEPGQSAEA--CMAVMVEKHVRHLPVLKDGELAGIVSIGDLMK 123
Query: 187 AVVEQQKGELKRLNEFIRG 205
+++++++ +L ++RG
Sbjct: 124 SIIDEEQFNASQLVRYVRG 142
>gi|325923778|ref|ZP_08185394.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
gi|325545750|gb|EGD16988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
Length = 142
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA+ IG+++V+ + + GI +ERDY RK+V + R+ T VAEIM+ E ++ PS
Sbjct: 31 MAEKGIGAVLVM---DGPRLIGIVSERDYARKVVLRDRASSTTSVAEIMSTEVVTVS-PS 86
Query: 150 DANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
D + MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 87 D-TVERCMQLMTDGRFRHLPVVENGRVHGVISIGDLVKAVIENQQRDIDQLQRYI 140
>gi|430760638|ref|YP_007216495.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010262|gb|AGA33014.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 142
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V EVL KG D + +V +A++ MA H IG+L VL+ G + G+ +ERDY
Sbjct: 4 VHEVLNEKGHD----VYSIGPEASVFEALRMMADHEIGALPVLENG---RLVGLISERDY 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
RK++ RS + T V EIM ++ + + M LMTDK +RH+PV++ G++VG
Sbjct: 57 ARKVILLDRSSRNTPVREIMM--ARVTCVEPGRTVEECMALMTDKRVRHLPVLEHGKLVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI D+V+A++++Q+ + +L +I
Sbjct: 115 LVSIGDLVKAIIDEQQFIISQLELYI 140
>gi|219121815|ref|XP_002181254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407240|gb|EEC47177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 182
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DAV+ A NIG LV + ++ G+ +ERDY+ KI GR+ K T V EI T
Sbjct: 49 DTPVYDAVQKFAAFNIGCLVTTD--KAGNMTGVVSERDYICKIALLGRTSKETPVKEIAT 106
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--RIVGMISIVDVVRAVVEQQKGELK 197
+IT + ++ M+ M K IRH+P++D +++GM+SI D+V+ V+ +++ +K
Sbjct: 107 RGANIITAKAGESVESCMEKMMSKGIRHLPIVDDAEKVIGMVSIKDLVKTVITEKEQTIK 166
Query: 198 RLNEFIRGE 206
L++F G+
Sbjct: 167 VLSDFALGK 175
>gi|392381228|ref|YP_005030425.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356876193|emb|CCC96950.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 161
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVL--KPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
+C + +V DA MA+ + +L+V +P + + GIFTERD ++V GR P
Sbjct: 16 LVCLPPEASVRDAAVLMAERRVAALLVTQDRPKGGRSLKGIFTERDLAARVVAAGRDPAT 75
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-----DGRIVGMISIVDVVR 186
TR+AE+MT TL DA+ A+ LM H RH+P+ DG ++G++SI D+
Sbjct: 76 TRLAEVMTASPD--TLGPDAHAYEALDLMERHHYRHLPITADGESDGTVMGIVSIRDLFA 133
Query: 187 AVVEQQKGELKRLNEFIRGEYY 208
V + E++ FI G Y
Sbjct: 134 VVRAHLEDEIRDREAFIFGSNY 155
>gi|424793987|ref|ZP_18220021.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796231|gb|EKU24777.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 142
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK G D V DA++ MA IG+++V++ G +AGI +ERDY RK+V Q RS
Sbjct: 10 DKGGEIHAVAPDAAVVDALRLMADKGIGAVLVMQDG---RLAGILSERDYARKVVLQDRS 66
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGM-ISIVDVVRA 187
T V +IM+ K+ T+ ++ M+LMT + IRH+PV+ V ISI D+V+A
Sbjct: 67 SATTPVRDIMS--AKVYTVDPSQSVQQCMELMTGQRIRHLPVVQAGAVVGVISIGDLVKA 124
Query: 188 VVEQQKGELKRLNEFI 203
V+E+Q+ EL +L +I
Sbjct: 125 VIEEQQRELDQLQRYI 140
>gi|46199936|ref|YP_005603.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55980318|ref|YP_143615.1| hypothetical protein TTHA0349 [Thermus thermophilus HB8]
gi|46197563|gb|AAS81976.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55771731|dbj|BAD70172.1| CBS domain protein [Thermus thermophilus HB8]
Length = 143
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 96/148 (64%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +VL+ KG G + TV DA++ +A+H+IG+L+V+ E + + GIFTER
Sbjct: 1 MTVRQVLVHKG----GGVHAIHPEATVLDALRKLAEHDIGALLVM---EGERLLGIFTER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVP-VIDGRI 175
DY RK+V GR K T+V E+MT + + T+ +A++ AM+LMT++ RH+P V R+
Sbjct: 54 DYARKLVLLGRFSKDTKVREVMTTD--VPTVAPEASLEEAMRLMTERRTRHLPVVEGERV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI D+V+A++ Q + L+ ++
Sbjct: 112 VGVVSIGDLVKAIITHQGMLIAELSRYV 139
>gi|302337838|ref|YP_003803044.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301635023|gb|ADK80450.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 147
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 90/150 (60%), Gaps = 12/150 (8%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
++ ++L KG D W R + TV A+ M++ N+G++VVL +QQ + GIF+ERD
Sbjct: 3 TIKDLLAQKGAD---IW-SVRPETTVFQALSLMSEKNVGAVVVL--DDQQKMIGIFSERD 56
Query: 118 YLRKIVGQGRS---PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR 174
Y RK +G S P+ V E+MT E ++ + + + M LMT K RH+PV++
Sbjct: 57 YARKTIGAIGSQECPRDLPVKELMTTE--VVAIKPETGVETCMALMTKKRFRHLPVMENN 114
Query: 175 -IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
++G+ISI D+V+AV+ ++ + ++ ++I
Sbjct: 115 ALIGIISIGDIVKAVITEKDFLIAKMEQYI 144
>gi|430807269|ref|ZP_19434384.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
gi|429500427|gb|EKZ98798.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
Length = 146
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL +K + + S TV A++ MA+ IG+L+V+ EQQ I GI +ERDY R
Sbjct: 6 QVLESKANQAIFS---IPPTATVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYAR 59
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMI 179
K++ R+ + T V EIMT + +I + +D M LMT +RH+PV++ +++GMI
Sbjct: 60 KVILMQRTSRETLVREIMT--SAVIYVRADQTTDECMALMTRHRLRHLPVMNSDQLLGMI 117
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRG 205
SI D+V ++ +Q+ +++L +I G
Sbjct: 118 SIGDLVNDIISEQRFTIEQLEHYIHG 143
>gi|83945661|ref|ZP_00958007.1| CBS domain protein [Oceanicaulis sp. HTCC2633]
gi|83851027|gb|EAP88886.1| CBS domain protein [Oceanicaulis alexandrii HTCC2633]
Length = 143
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
DDK + T+++A + QH +G+++V G+Q G+F+ERD R I G G
Sbjct: 8 DDKGATVFTLAPSQTLQEAAVALTQHRVGAVIVTDAGDQP--VGVFSERDLARAIAGSGP 65
Query: 128 SPKYTRVAEIMTDENKLITL-PSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVV 185
S RV +M+ LIT PSD +I + LMT+K +RH+ ++D GR+ G++SI DVV
Sbjct: 66 SALSERVESVMS--TGLITASPSD-DIDTLLALMTEKRVRHIIIMDEGRMTGVVSIGDVV 122
Query: 186 RAVVEQQKGELKRLNEFIRG 205
+ + + E + L +I G
Sbjct: 123 KRKIAHAEAEAESLKAYIEG 142
>gi|328872298|gb|EGG20665.1| hypothetical protein DFA_00526 [Dictyostelium fasciculatum]
Length = 244
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 90/158 (56%), Gaps = 9/158 (5%)
Query: 53 GLENISVAEVLMTKG----DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQH 108
G + ++ +L KG + + + R +DTV A+K M + +G+++V+ Q
Sbjct: 82 GFVDSKISSLLAQKGLPLKGQQAPNIIRVRENDTVLTAIKQMHTNKVGAVIVV--DSQNK 139
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ GIF+ERDYL + + K T V ++MT ++T+ D + M++M+ + RH+
Sbjct: 140 MTGIFSERDYLNSLAVRDLKSKDTYVKDVMT--TPVVTVRLDTSTAKCMKIMSQRRFRHL 197
Query: 169 PVIDG-RIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
PVIDG ++VG++SI D+V+ ++ Q+ E+ L + + G
Sbjct: 198 PVIDGDKLVGIVSIGDIVKHIISDQRTEITHLRQVLSG 235
>gi|407645157|ref|YP_006808916.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
gi|407308041|gb|AFU01942.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
Length = 144
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+AE+L KG D D TV + +A+HNIG++VV GE I GI +ERD
Sbjct: 3 IAEILRRKGCD----VATVAPDTTVRSLLATLAEHNIGAVVVTPDGEG--IVGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + +G T VA+IMT + + T D + MT+ IRH+PV+ +GR+VG
Sbjct: 57 VRTLHARGAELLDTPVADIMTTDVR--TCGPDDEVDSLRNTMTEHRIRHLPVVGEGRLVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
++SI DVV++ + + E + L E+++G+Y
Sbjct: 115 IVSIGDVVKSAISELATERQHLVEYLQGKY 144
>gi|294627296|ref|ZP_06705882.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598378|gb|EFF42529.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 119
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
+A++ MA+ +G+++V+ + + GI +ERDY K+V + RS T VAEI + E
Sbjct: 3 EAIRLMAEKAVGAVLVM---DGPRLVGIVSERDYAHKVVLRDRSSSTTSVAEITSAEVVT 59
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
++ PSD + MQLMTD RH+PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 60 VS-PSD-TVERCMQLMTDGRFRHLPVVENGRVQGVISIGDLVKAVIEAQRQDIDQLQRYI 117
>gi|94308961|ref|YP_582171.1| hypothetical protein Rmet_0016 [Cupriavidus metallidurans CH34]
gi|93352813|gb|ABF06902.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 146
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL +K + + S TV A++ MA+ IG+L+V+ EQQ I GI +ERDY R
Sbjct: 6 QVLESKANQAIFS---IPPTATVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYAR 59
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMI 179
K++ R+ + T V EIMT +I + +D M LMT +RH+PV++ +++GMI
Sbjct: 60 KVILMQRTSRETLVREIMT--TAVIYVRADQTTDECMALMTRHRLRHLPVMNSDQLLGMI 117
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRG 205
SI D+V ++ +Q+ +++L +I G
Sbjct: 118 SIGDLVNDIISEQRFTIEQLEHYIHG 143
>gi|449019275|dbj|BAM82677.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 312
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 12/135 (8%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPG------EQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
+ TV +AV+ M HN+G++ V++P + Q + GIFTERDYLRKI+ ++ K T
Sbjct: 133 ESTVFEAVQKMVAHNVGAVAVVEPDANDAARQAQRLVGIFTERDYLRKIIVASKASKTTP 192
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI----DGRIVGMISIVDVVRAVV 189
+AE+MT + +T + A+ LMT+ IRH+PV+ +G ++ M+S+ ++R V
Sbjct: 193 IAEVMTQDPVCVT--PQQRVGDALHLMTELDIRHLPVLESLPNGSLLTMVSMRQLMREVA 250
Query: 190 EQQKGELKRLNEFIR 204
+ ++ L +R
Sbjct: 251 ASHEKQVSALMAQLR 265
>gi|374366874|ref|ZP_09624947.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
gi|373101560|gb|EHP42608.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
Length = 147
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 82/125 (65%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A++ MA+ IG+L+V++ G+ I GI +ERDY RK++ R+ + T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIERGD---IVGILSERDYARKVILMSRTSRETFVRDIMT-- 78
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
+ +I + D + M LMT +RH+PV+DG +++GM+SI D+V+ ++ +Q+ +++L
Sbjct: 79 SAVIYVRGDQSTDECMALMTQHRMRHLPVMDGDQLIGMLSIGDLVKDIISEQRFIIEQLE 138
Query: 201 EFIRG 205
+I G
Sbjct: 139 HYITG 143
>gi|357385164|ref|YP_004899888.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
gi|351593801|gb|AEQ52138.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
Length = 141
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V +L KG D V RSD T+ D + +A+HNIG++VV+ G+ + GI +ERD
Sbjct: 3 VESILTIKGSDVV----TVRSDSTIGDLIATLARHNIGAVVVVDNGK---VEGIISERDI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + G + V+ +MT K T SD + AM +M+ RH+PV+ +G+++G
Sbjct: 56 VRHLAGSAEGFRAKPVSTLMTRAPKTCT-KSD-TVDQAMNIMSQGRFRHLPVVENGQLIG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI DVV+ +E+ + E L E+I
Sbjct: 114 IISIGDVVKRKIEEAEQEAGALREYI 139
>gi|406911913|gb|EKD51615.1| signal transduction protein [uncultured bacterium]
Length = 148
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 92/152 (60%), Gaps = 10/152 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V ++L KG+ W +D +V+ AVK MAQ +G+L+V+K + G+F+ERD
Sbjct: 4 TVNQLLKRKGNQ---IWSVAPTD-SVDKAVKLMAQRKVGALMVMK---DNAVVGVFSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
R + +G S V+E+M+ + + P+ ++ M+ MT+K IRH+PV+ + ++V
Sbjct: 57 LARNMAHKGFSNPNIPVSEMMSRQVYYVN-PT-MTMVDCMKFMTEKRIRHLPVMENNKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
G++SI DVV ++++ Q+ E+K L +I G +
Sbjct: 115 GVVSIGDVVNSIIQDQESEIKDLENYIIGGTF 146
>gi|433679996|ref|ZP_20511656.1| Inosine-5'-monophosphate dehydrogenase Short=IMP dehydrogenase
[Xanthomonas translucens pv. translucens DSM 18974]
gi|430814905|emb|CCP42287.1| Inosine-5'-monophosphate dehydrogenase [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 142
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 81/136 (59%), Gaps = 6/136 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK G D V DA++ MA IG+++V+ G +AGI +ERDY RK+V Q RS
Sbjct: 10 DKGGEIHAVAPDAAVVDALRLMADKGIGAVLVMHDG---RLAGILSERDYARKVVLQDRS 66
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGM-ISIVDVVRA 187
T V +IM+ K+ T+ ++ M+LMT + IRH+PV+ V ISI D+V+A
Sbjct: 67 SATTPVRDIMS--AKVYTVDPSQSVQQCMELMTGQRIRHLPVVQAGAVVGVISIGDLVKA 124
Query: 188 VVEQQKGELKRLNEFI 203
V+E+Q+ EL +L +I
Sbjct: 125 VIEEQQRELDQLQRYI 140
>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 198
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
+A++ MA+ IG+++V+ + + GI +ERDY RK+V + R+ T VA IM+ E
Sbjct: 3 EAIRLMAEKAIGAVLVM---DGPRLLGIVSERDYARKVVLRDRASSTTSVAGIMSAEVVT 59
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
++ PSD + MQLM+D RH+PV+ + R+ G+ISI D+V+AV+E Q ++ +L +I
Sbjct: 60 VS-PSD-TVERCMQLMSDGRFRHLPVVENSRVQGLISIGDLVKAVIEAQPQDIDQLQRYI 117
>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
Length = 172
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L C D V DAV MA+ N GS+ V P + G+ TERD R+++G R PK T V
Sbjct: 16 LTCTPDTIVFDAVTQMAEKNFGSIFVTDP--DNRVLGVMTERDIFRRVIGASRDPKTTPV 73
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQ 192
+E+MT E + D IL MQ+M+++ R +P++ D R++ ++S D V Q
Sbjct: 74 SEVMTTEVR--AAHKDDQILDWMQIMSNERFRRLPIVDEDKRLIAVMSQGDFVGYTWPQL 131
Query: 193 KGELKRLNEFIRGEYY 208
G++ ++ + G +
Sbjct: 132 LGQVGQMAQATLGPRF 147
>gi|421746846|ref|ZP_16184610.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
gi|409774585|gb|EKN56187.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
Length = 145
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 82/125 (65%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A++ MA+ +IG+L+V++ G+ I GI +ERDY RK++ R+ + T V +IMT
Sbjct: 24 TVYAALQLMAEKSIGALLVMEHGK---IVGILSERDYARKVILMQRTSRETFVRDIMT-- 78
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
++ + +D M LMT +RH+PV++G ++GM+SI D+V+ ++ +Q+ +++L
Sbjct: 79 TAVVYVRADQTTDECMALMTQHRLRHLPVMEGDELIGMLSIGDLVKDIISEQRFIIEQLE 138
Query: 201 EFIRG 205
++I G
Sbjct: 139 QYIAG 143
>gi|119898433|ref|YP_933646.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
gi|119670846|emb|CAL94759.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
Length = 143
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A + M ++GS++++ G H++GIFTERD L +++ GR P TR++E+MT +
Sbjct: 23 TVLEASRRMTDLHVGSIMIVHDG---HLSGIFTERDALVRVIAAGRDPARTRLSEVMTRD 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVV 185
+ I+ SD + HAM LM + RHVPV D GR +GMIS D +
Sbjct: 80 PQSIS--SDRPLGHAMHLMYEGGFRHVPVTDCGRPIGMISARDAL 122
>gi|114798278|ref|YP_761342.1| hypothetical protein HNE_2660 [Hyphomonas neptunium ATCC 15444]
gi|114738452|gb|ABI76577.1| CBS domain protein [Hyphomonas neptunium ATCC 15444]
Length = 144
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKP-GEQQHIAGIFTERDYLRKIVGQG 126
+DK + R+DDT+ +A + + + IG++V L GE I G+ +ERD +R+ QG
Sbjct: 8 NDKGREVITLRADDTLREAARLLDERRIGAVVTLDADGE---IVGVLSERDIVRQFARQG 64
Query: 127 RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
V MT +IT+ +DA + A+QLMTD+ IRH+PV+ + R+ G +SI D+V
Sbjct: 65 EGALDMPVGNAMT--RAVITISADAEVDEALQLMTDRRIRHLPVVRNSRLTGFVSIGDLV 122
Query: 186 RAVVEQQKGELKRLNEFIRGEY 207
+ + + + E + + ++ ++
Sbjct: 123 KWKIAETQAEAEAMKSYLSSQF 144
>gi|407768617|ref|ZP_11115995.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288301|gb|EKF13779.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 149
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
S D+V DAV M + IG+++++ +AGIFTERD + ++V +G T
Sbjct: 14 SIATLNPADSVMDAVNMMTERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAAST 71
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQ 191
+ ++MT N P D ++A++LM+ + RH+PV+DG +VGM+SI D+ V Q
Sbjct: 72 PLKQVMT-ANPDTLAPGDT-AMNALELMSARRYRHLPVLDGENVVGMVSIRDLFNVVKAQ 129
Query: 192 QKGELKRLNEFIRGEYY 208
+ +L+ +FI G Y
Sbjct: 130 LEEDLREREKFIFGSDY 146
>gi|334143031|ref|YP_004536243.1| hypothetical protein [Novosphingobium sp. PP1Y]
gi|333941067|emb|CCA94425.1| conserved hypothetical protein [Novosphingobium sp. PP1Y]
Length = 141
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 88/140 (62%), Gaps = 9/140 (6%)
Query: 66 KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ 125
+G D V L C+ TV +AV+ +A+ IG+L VL + + +AG+F+ERD + ++
Sbjct: 8 EGRDTV---LTCKVSTTVREAVEILAERRIGALPVL---DGEGLAGMFSERDVIYRLREF 61
Query: 126 GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDV 184
G V+E+MT +T+ S+ +++ A+ +MT + IRH+PV+DG R+VGM+SI D+
Sbjct: 62 GPGVLDKPVSEVMT--APAVTVESETSVMTALAMMTRRRIRHLPVMDGARMVGMVSIGDL 119
Query: 185 VRAVVEQQKGELKRLNEFIR 204
V+ +++ + E + E+I+
Sbjct: 120 VKYRIDKVESEAAAMREYIQ 139
>gi|389706323|ref|ZP_10186413.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
gi|388610800|gb|EIM39915.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
Length = 143
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+VL K ++ + + TV +A+ MA +IG++VV+ E+ + GI +ERD
Sbjct: 3 NVAQVLKDKPSQEIYTI---HPEATVLEAITLMADKDIGAIVVV---EEDKVVGILSERD 56
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RKIV R+ T V++IMT + +IT+ ++ + LMT+KH+RH+PV++ G++V
Sbjct: 57 YTRKIVLMERTSFDTTVSQIMT--SNVITVDCHTSVPDCLSLMTNKHLRHLPVVEAGKLV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ SI D+V+A + Q+ + +L ++I G
Sbjct: 115 GLASIGDLVKAAMNDQQILIDQLQQYISG 143
>gi|301122411|ref|XP_002908932.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099694|gb|EEY57746.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 184
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A+K MA N+G L V + GI TERDYL+K+ QG + K T V +IMT+
Sbjct: 53 TVFEALKRMAGINLGCLAV--SSDDDKFVGILTERDYLKKVELQGLTAKDTLVKQIMTNR 110
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKRL 199
+L + M M +RH+PV+ DG ++GM+SI D+VR + + ++ L
Sbjct: 111 ARLTVAKENETPSQLMTKMLSSDVRHLPVVNDDGNLIGMLSIKDIVREINREHDADMDTL 170
Query: 200 NEFIRG 205
+ F G
Sbjct: 171 SNFAMG 176
>gi|307596625|ref|YP_003902942.1| putative CBS domain-containing signal transduction protein
[Vulcanisaeta distributa DSM 14429]
gi|307551826|gb|ADN51891.1| putative signal transduction protein with CBS domains [Vulcanisaeta
distributa DSM 14429]
Length = 128
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 7/119 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ CRS D + AV M HN+GS++V+ E + GIFTERD +R IV +G S T +
Sbjct: 12 ISCRSTDPITCAVAKMYMHNVGSVLVID--EDEKPVGIFTERDLVR-IVAEGISLD-TPL 67
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQ 192
++M+ KLIT + +++ A M + +IRH+PV+ +GR VGM+SI D+VRA++ Q+
Sbjct: 68 MKVMS--RKLITANTSESVISAAMKMIENNIRHLPVVEEGRAVGMVSIRDLVRALMAQE 124
>gi|144899054|emb|CAM75918.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 13/129 (10%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A + MA+ IG++V++ G+ + GIFTERD L +++ +GR P+ T + ++MT
Sbjct: 23 TVREAAQEMAKRRIGAIVIVDDGK---LMGIFTERDGLFRVLAEGRDPENTTLDQVMT-- 77
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVD-----VVRAVVEQQKGE 195
KL T+ D +LHA+ +M D RH+PV+ G+ VGM+SI D +V V E +K E
Sbjct: 78 GKLSTIAPDRPLLHALHIMHDNGFRHMPVVQGGKPVGMLSIRDALDYELVHFVKEIEKKE 137
Query: 196 LKRLNEFIR 204
L E IR
Sbjct: 138 --ALTEIIR 144
>gi|113866093|ref|YP_724582.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
gi|113524869|emb|CAJ91214.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
Length = 146
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A++ MA+ IG+L+V++ GE I GI +ERDY RK++ R+ + T V +IMT
Sbjct: 24 TVYTALQLMAEKGIGALLVIEHGE---ILGILSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
N +I + + M LMT +RH+PV++G ++GM+SI D+V+ ++ +Q+ +++L
Sbjct: 79 NAVIYVGASQTTDECMALMTRHRLRHLPVMEGDELIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 201 EFIRG 205
+I G
Sbjct: 139 HYITG 143
>gi|152980858|ref|YP_001353867.1| hypothetical protein mma_2177 [Janthinobacterium sp. Marseille]
gi|151280935|gb|ABR89345.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 176
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 45 SSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPG 104
S++ T E G + V+E+L KG+ D + DAV MA+ +IGSLVV++ G
Sbjct: 16 STTITLEDG--PMKVSEILKVKGN----ILFTVTPDSPMLDAVNAMAEKDIGSLVVMEAG 69
Query: 105 EQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKH 164
++ G+ T R+ + I G + V M + +T+ SDA I +LM +KH
Sbjct: 70 ---NLIGMLTFREVMATIHANGGAVGSDSVRRYM--DKHPMTITSDAEINEVRRLMLEKH 124
Query: 165 IRHVPVIDGRI-VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
R+VPV+DG+I VG+IS DV +AV+E Q E K L +I+
Sbjct: 125 ARYVPVLDGKILVGVISFYDVAKAVLEAQSFENKMLKSYIQ 165
>gi|407773810|ref|ZP_11121110.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
gi|407283256|gb|EKF08797.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
Length = 149
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+V DAV MA+ IG+++++ +AGIFTERD + ++V +G ++++MT
Sbjct: 22 DSVMDAVTMMAERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAASVPLSKVMTA 79
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRL 199
+ TL + + + A+ LM+ + RH+PV+DG ++VGM+SI D+ V Q + +++
Sbjct: 80 DPD--TLGPNDSAMSALDLMSARRYRHLPVVDGDKVVGMVSIRDLFNVVKRQLEEDVRER 137
Query: 200 NEFIRGEYY 208
+FI G Y
Sbjct: 138 EKFIFGSDY 146
>gi|114331513|ref|YP_747735.1| signal-transduction protein [Nitrosomonas eutropha C91]
gi|114308527|gb|ABI59770.1| putative signal-transduction protein with CBS domains [Nitrosomonas
eutropha C91]
Length = 146
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 10/147 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V +L KG D V D+V DA++ M +NIG+L+V+K + + GI TERD
Sbjct: 3 TVRSLLQEKGHDVV----VIGPSDSVSDAMQKMTTNNIGALLVVK---DKKLIGILTERD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
+ RK RS K RV EIMT + + L D M LMT+ +RH+PV+ DG IV
Sbjct: 56 FSRKYCLLNRSVKDMRVEEIMTRQVAYVGL--DYTNEDCMALMTEICVRHLPVLDDGNIV 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI D+V+ ++ Q + +++L ++I
Sbjct: 114 GILSIGDLVKDIISQHEFVIQQLIQYI 140
>gi|381191507|ref|ZP_09899017.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
gi|384430235|ref|YP_005639595.1| putative signal transduction protein [Thermus thermophilus
SG0.5JP17-16]
gi|333965703|gb|AEG32468.1| putative signal transduction protein with CBS domains [Thermus
thermophilus SG0.5JP17-16]
gi|380450867|gb|EIA38481.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
Length = 143
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 93/148 (62%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +VL+ KG G + TV DA++ +A+H+IG+L+V+ E + GIFTER
Sbjct: 1 MTVRQVLVHKG----GGVHAIHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVP-VIDGRI 175
DY RK+V GR K T+V E+MT + T+ +A + AM+LMT++ RH+P V R+
Sbjct: 54 DYARKLVLLGRFSKDTKVREVMT--MGVPTVAPEAFLEEAMRLMTERRTRHLPVVEGERV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI D+V+A++ Q + L+ ++
Sbjct: 112 VGVVSIGDLVKAIITHQGMLIAELSRYV 139
>gi|319794826|ref|YP_004156466.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315597289|gb|ADU38355.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 142
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 79/125 (63%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+ +A+ +G+L+V+ GE+ + G +ERDY RK+ QG++ K +V+EIMT +
Sbjct: 23 SVFDALATLARFEVGALMVMD-GEK--LVGFLSERDYTRKVALQGKNSKEMKVSEIMTPD 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
++T+ M LM+ + RH+PV+DG ++VGMISI D++ ++ + + + +L
Sbjct: 80 --VMTVTPQTRTRACMALMSQRKFRHLPVVDGDKVVGMISIQDLMDDIISEHEQTIDQLT 137
Query: 201 EFIRG 205
+I+
Sbjct: 138 SYIQS 142
>gi|255086303|ref|XP_002509118.1| predicted protein [Micromonas sp. RCC299]
gi|226524396|gb|ACO70376.1| predicted protein [Micromonas sp. RCC299]
Length = 173
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 18/153 (11%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIA---GIFTERDYLRKIVGQGRS 128
GS C + + V AV+ M ++G+L+V+ GI TERDYLR + S
Sbjct: 21 GSNHWCDASEPVAVAVRRMNSQDVGALLVMDRSASPQTGAMRGIVTERDYLRAVARGAVS 80
Query: 129 PKYTRVAEIMTD---ENK--LITLPSDANILHAMQLMTDKHIRHVPVI-----DGR---- 174
P T V +IMTD +N LI+ D ++L AM++MT+ IRH+P I DG
Sbjct: 81 PG-TAVGDIMTDFATDNGAGLISASPDTSVLAAMEIMTEARIRHIPCIAPPSRDGATGAV 139
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
+ GM+ I DVV+A++ +++ E++ +FI G Y
Sbjct: 140 MEGMVCIGDVVKALLAEEREEVQICRDFINGVY 172
>gi|209522266|ref|ZP_03270897.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209497300|gb|EDZ97524.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 155
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 85/147 (57%), Gaps = 10/147 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L KG+ + D T+ DAV MA+H+IGSLVV++ G+ + G+ T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTTLHDAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVG 177
+ + G S + + ++M D T +D N + M L + H+R++PV++ R ++G
Sbjct: 56 ILTLSTNGGSVGTSTIRKVMDDHPLTCTPETDVNEVRRMML--EHHVRYLPVMESRTLMG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIR 204
+IS DV +AVVE+Q E + L +IR
Sbjct: 114 VISFYDVAKAVVEEQSFENRMLKAYIR 140
>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 10/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L +KG V V DA + +A+ IGS+++L E+ +AGI +ERD
Sbjct: 3 VSDILKSKGSAVV----TAPPSMPVADAARLLAEKRIGSILIL---ERNKVAGILSERDI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R + +G V+ +MT K++T I MQ+MT RHVPV+D G++ G
Sbjct: 56 VRALANEGAGCLDGPVSRLMT--AKVVTCTPAQTIADVMQMMTTGRFRHVPVVDNGKVAG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
MISI DVV+ +E+ + E++++ ++ G
Sbjct: 114 MISIGDVVKWRLEEAQEEVRQMAAYVAG 141
>gi|374850834|dbj|BAL53812.1| signal transduction protein [uncultured planctomycete]
Length = 151
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
E+L KG G L TV A + M QH+IG LVV +++ I GI +ERD L+
Sbjct: 6 ELLQLKG----GQVLTISPSQTVLAAAELMNQHHIGCLVVC---DERGICGILSERDILQ 58
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGM 178
++V R P T V E+MT ++I D I A ++M +K IRH+PVI DG++ GM
Sbjct: 59 RVVAARRDPSSTTVGEVMT--TQVIFAAPDMPIDQAQRIMMEKRIRHLPVIGEDGQLCGM 116
Query: 179 ISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI D+ + + L E+I G
Sbjct: 117 ISIGDLNAWEARTKDTTIHLLQEYIYG 143
>gi|398347881|ref|ZP_10532584.1| signal transduction protein [Leptospira broomii str. 5399]
Length = 146
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 85/146 (58%), Gaps = 11/146 (7%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L TV +A++ M +++IGS++VL G+ +AGIFTERD L
Sbjct: 6 ILEKKDRKI---LSVEPQTTVWEAIRFMTKYDIGSVIVLNAGK---LAGIFTERDLLH-F 58
Query: 123 VGQGRSPKYTR-VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMIS 180
R + + VAE+M+ +L T+ + + +M K IRH+P++DG R++G+IS
Sbjct: 59 ASTDREKVFDKTVAEVMS--TQLTTMTPGDQVDEVLAIMLKKRIRHMPILDGNRLMGIIS 116
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRGE 206
I D V+A +E+ + E K L +I E
Sbjct: 117 IGDAVKAKIEKTEEENKNLKRYIYSE 142
>gi|188590819|ref|YP_001795419.1| hypothetical protein RALTA_A0024 [Cupriavidus taiwanensis LMG
19424]
gi|170937713|emb|CAP62697.1| conserved hypothetical protein, CBS domain [Cupriavidus taiwanensis
LMG 19424]
Length = 146
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A++ MA+ IG+L+V++ GE I GI +ERDY RK++ R+ + T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHGE---IKGILSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
+I + ++ M LMT +RH+PV++G +++GM+SI D+V+ ++ +Q+ +++L
Sbjct: 79 TAVIYVSANQTTDECMALMTRHRLRHLPVMEGNQLIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 201 EFIRG 205
+I G
Sbjct: 139 HYITG 143
>gi|357491603|ref|XP_003616089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517424|gb|AES99047.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 552
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 36 SRFGCVISSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNI 95
SRF S++ + EE G E+ +++++L KG GS L C +DDTV DAVK+M Q+N
Sbjct: 12 SRFE---SATPARIEEHGFESTTISDILQGKGKGADGSRLWCTTDDTVYDAVKSMTQNNA 68
Query: 96 GSLVVLKPGEQQHIAGIFTER 116
G+LVV+KPGE++ IAGI TER
Sbjct: 69 GALVVVKPGEEKSIAGIITER 89
>gi|398810185|ref|ZP_10569015.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
gi|398083876|gb|EJL74580.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
Length = 142
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
+W D +V DA+ +A+ +G+L+V+ GE+ + G +ERDY RK+ QG++ K
Sbjct: 14 AAWRTS-PDTSVFDALSTLARFEVGALMVMD-GEK--LVGFLSERDYTRKVALQGKNSKE 69
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVE 190
+V +IMT + ++T+ M LM+ + RH+PV+DG +++GMISI D++ ++
Sbjct: 70 VKVRDIMTPD--VMTVTPQTRTRACMTLMSQRKFRHLPVVDGDKVIGMISIQDLMDDIIS 127
Query: 191 QQKGELKRLNEFIRG 205
+ +++L +I+
Sbjct: 128 DHEATIEQLTTYIQS 142
>gi|91784441|ref|YP_559647.1| hypothetical protein Bxe_A1358 [Burkholderia xenovorans LB400]
gi|385208771|ref|ZP_10035639.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
gi|91688395|gb|ABE31595.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
gi|385181109|gb|EIF30385.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
Length = 153
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D T+ DAV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S + + ++M D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILTLSKNGGSVGTSTIRKVMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVLESRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|404251674|ref|ZP_10955642.1| signal-transduction protein [Sphingomonas sp. PAMC 26621]
Length = 143
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++ +L KG + V +D +V AV +A+ IG++ VL + I GIF+ER
Sbjct: 2 MTIGAILGGKGREVV----SVTADQSVRAAVALLAERRIGAVPVL---DGTRIVGIFSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D + + QG VA+IMT IT+ D ++ A+ LMT + IRH+PV+DG RI
Sbjct: 55 DVIYAVASQGNDALGQTVADIMT--APAITVGPDEAVIGALSLMTRRRIRHLPVVDGDRI 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VGM+SI D+V+ +++ + + + + +I+
Sbjct: 113 VGMVSIGDLVKYRIDRIEADAEAMRSYIQ 141
>gi|224000868|ref|XP_002290106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973528|gb|EED91858.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 194
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ TV +AV +A +++G LV +++G+ +ERDY++KI G+S K T V +I T
Sbjct: 62 ESTVFEAVNKLAAYDVGCLVT--KDANGNLSGVISERDYVQKIALLGKSSKDTLVRQIST 119
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKGELK 197
L+T + MQ M + IRH+P++D G +VG+ISI D+++ +E+++ +
Sbjct: 120 KAADLVTASPSDTVDACMQKMLTRDIRHLPLVDESGAVVGIISIKDLIKTCLEEKEHVIH 179
Query: 198 RLNEFIRGE 206
+L+ F GE
Sbjct: 180 QLSSFAVGE 188
>gi|348676171|gb|EGZ15989.1| hypothetical protein PHYSODRAFT_286413 [Phytophthora sojae]
Length = 184
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A+ MA N+G L V GE G+ TERDYL+K+ QG + K T V +IMT
Sbjct: 53 TVFEAITRMAGINLGCLAV--SGEGGKFVGVVTERDYLKKVELQGLTAKNTLVGQIMTHR 110
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKRL 199
+LI M M +RH+PVI DG + GM+SI D+VR + + ++ L
Sbjct: 111 ARLIVAGESETPNQLMSKMLSSDVRHLPVINGDGDLTGMLSIKDLVREINREHDADMDTL 170
Query: 200 NEFIRG 205
+ F G
Sbjct: 171 SNFALG 176
>gi|239816604|ref|YP_002945514.1| signal transduction protein with CBS domains [Variovorax paradoxus
S110]
gi|239803181|gb|ACS20248.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 142
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
+W D +V DA+ +A+ +G+L+V+ + + G +ERDY RK+ QG++ K
Sbjct: 14 AAWRTS-PDTSVFDALATLARFEVGALMVM---DGDRLVGFLSERDYTRKVALQGKNSKE 69
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVE 190
+V+EIMT + ++T+ M LM+ + RH+PV+DG ++VGMISI D++ ++
Sbjct: 70 MKVSEIMTPD--VMTVTPQTRTRACMALMSQRKFRHLPVVDGAKVVGMISIQDLMDDIIA 127
Query: 191 QQKGELKRLNEFIRG 205
+ + +L +I+
Sbjct: 128 DHEETIAQLTTYIQS 142
>gi|73539746|ref|YP_294266.1| hypothetical protein Reut_A0040 [Ralstonia eutropha JMP134]
gi|72117159|gb|AAZ59422.1| CBS [Ralstonia eutropha JMP134]
Length = 146
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A++ MA+ IG+++V++ G+ I GI +ERDY RK++ RS + T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGAVLVMEHGK---IVGILSERDYARKVILMQRSSRDTLVRDIMT-- 78
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLN 200
+ +I + D + M LMT +RH+PV++G ++GM+SI D+V+ ++ +Q+ +++L
Sbjct: 79 SSVIYVSGDQSTDECMALMTKHRMRHLPVMNGEDLIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 201 EFIRG 205
+I G
Sbjct: 139 HYIHG 143
>gi|187924745|ref|YP_001896387.1| hypothetical protein Bphyt_2769 [Burkholderia phytofirmans PsJN]
gi|187715939|gb|ACD17163.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 153
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D T+ DAV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTTLHDAVNAMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S + + ++M D T +D N + M M + H+R++PV++ R +
Sbjct: 54 EIMLTLSKNGGSVGTSTIRKVMDDHPLTCTPETDVNEVRRM--MLEHHVRYLPVLESRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|94496674|ref|ZP_01303250.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
gi|94424034|gb|EAT09059.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
Length = 183
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 10/155 (6%)
Query: 51 EKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIA 110
E+G + +++A +L KG+D + D+V AV+ +A IG + V+ G+ +
Sbjct: 36 EQGEQAMTIATILQRKGNDVIQ----VEPSDSVLSAVRLLADQRIGCVPVVANGQ---VV 88
Query: 111 GIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVP- 169
GIF+ERD + ++ G S V E+MT IT+ +++ + LMT + IRH+P
Sbjct: 89 GIFSERDLVYRVAQDGPSALDHSVGEVMT--APAITIDEQTSVMQGLSLMTKRRIRHLPV 146
Query: 170 VIDGRIVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
V+DG + GMISI D+V+ ++ + E + ++I+
Sbjct: 147 VVDGALAGMISIGDLVKFRIDSIESEAAAMRDYIQ 181
>gi|389721991|ref|ZP_10188690.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
gi|388444905|gb|EIM00998.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
Length = 142
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 91/146 (62%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V +L KG+D + V DA+K+MA+ +G+L+V++ GE+ + GI +ERDY
Sbjct: 4 VRHLLERKGND----IFAIAPEAPVLDAIKHMAEQRVGALLVMR-GER--LLGIVSERDY 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVP-VIDGRIVG 177
RK++ QG S +T V+EIM+ + +T+ ++ M+L TD+ IRH+P V +VG
Sbjct: 57 ARKVILQGHSSAHTAVSEIMS--SPPLTVGPATDVFDCMRLCTDRRIRHLPVVEGENVVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI D+V+ V+E Q ++++L +I
Sbjct: 115 VISIGDLVKEVIEAQAEQIEQLQRYI 140
>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [Janthinobacterium sp. Marseille]
gi|151282417|gb|ABR90827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 142
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 89/147 (60%), Gaps = 10/147 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V+++LM K +K C R+ + DA+K MA H++G++VV+ G+ + GI +ERD
Sbjct: 3 TVSQLLMLK--NKSLCSTCSRTP--LIDALKIMAVHDVGAMVVIDEGK---LVGILSERD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
Y RK+ +S V +IMT +++ T+ + + M LM+D + RH+PV + G ++
Sbjct: 56 YARKVALANKSSTDICVGDIMT--SRVTTVSKEHTVEECMTLMSDGNFRHLPVTEKGFVI 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G+ISI D+V+ V+ Q+ ++ L +I
Sbjct: 114 GVISIGDLVKEVISTQEETIQYLKTYI 140
>gi|253997459|ref|YP_003049523.1| putative signal transduction protein [Methylotenera mobilis JLW8]
gi|253984138|gb|ACT48996.1| putative signal transduction protein with CBS domains
[Methylotenera mobilis JLW8]
Length = 143
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 86/124 (69%), Gaps = 6/124 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V DA+ +A++ IG+L+VL E Q + GIF+ERDY R+++ +GRS K T + E+MT +
Sbjct: 25 VFDALVVLAEYKIGALIVL---EGQSLVGIFSERDYAREVILKGRSSKTTSIHEVMTSKV 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVP-VIDGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
L PSD ++ +A+ LMT+ IRH+P V+DG++VG++SI D+V+ + Q+ +K+L
Sbjct: 82 -LTATPSD-SVEYALSLMTEHRIRHLPVVVDGKVVGVLSIGDLVKETIAYQQELIKQLQS 139
Query: 202 FIRG 205
+I+
Sbjct: 140 YIKN 143
>gi|430743766|ref|YP_007202895.1| signal transduction protein [Singulisphaera acidiphila DSM 18658]
gi|430015486|gb|AGA27200.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Singulisphaera acidiphila DSM 18658]
Length = 144
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V +VL +KG G + + TV +A+ M Q+NIGSL V+ Q H+ GI +ERD
Sbjct: 3 VRDVLKSKG----GQIISIEPEATVAEAIARMVQNNIGSLPVVDA--QDHLIGIISERDL 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
LR I G VAE M+ + +T DAN+ M M+++ I VPV+DG ++VG
Sbjct: 57 LRGIHNHGEKICGKHVAEFMSRDP--VTCELDANVNDVMGQMSERRIAKVPVLDGAKLVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
++S+ DV++ + + + E + L +I G
Sbjct: 115 IVSVGDVIKVLYDNVQSENQHLMSYIHG 142
>gi|237800823|ref|ZP_04589284.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331023680|gb|EGI03737.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 146
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 85/125 (68%), Gaps = 6/125 (4%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V +A++ MA+ NIG+L E + G+ +ERDY RK+V +GRS T V++IM+ +
Sbjct: 27 VLEALRLMAEKNIGAL---PVVENGVVVGVVSERDYARKVVLKGRSSVGTPVSDIMS--S 81
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNE 201
+IT+ S ++ M +MTD H+RH+PV+ +G+++G++SI D+V+ + +Q +++L +
Sbjct: 82 HVITVDSQQSVDACMGIMTDSHLRHLPVVENGQLLGLLSIGDLVKEAIAEQASLIQQLEQ 141
Query: 202 FIRGE 206
+IRG+
Sbjct: 142 YIRGD 146
>gi|398342258|ref|ZP_10526961.1| signal transduction protein [Leptospira inadai serovar Lyme str.
10]
Length = 146
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L TV +A++ M +++IGS++VL G+ +AGIFTERD L
Sbjct: 6 ILEKKDRKI---LSVEPQTTVWEAIRFMTKYDIGSVIVLDAGK---LAGIFTERDLLH-F 58
Query: 123 VGQGRSPKYTR-VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMIS 180
R + + VAE+M+ +L T+ + + +M K IRH+P++DG R+ G+IS
Sbjct: 59 ASTDRENVFDKTVAEVMS--TQLTTMTPGDQVDEVLAIMLKKRIRHMPILDGNRLTGIIS 116
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRGE 206
I D V+A +E+ + E K L +I E
Sbjct: 117 IGDAVKAKIEKTEEENKNLKRYIYSE 142
>gi|359688647|ref|ZP_09258648.1| signal transduction protein [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418749444|ref|ZP_13305734.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
gi|418755846|ref|ZP_13312036.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384117171|gb|EIE03426.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274915|gb|EJZ42231.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
Length = 146
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 85/146 (58%), Gaps = 11/146 (7%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L TV +A++ M +++IGS++VLK G+ +AGIFTERD L
Sbjct: 6 ILEKKDRKI---LSVEPSTTVWEAIRFMTKYDIGSVIVLKEGK---LAGIFTERDLLH-F 58
Query: 123 VGQGRSPKYTR-VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMIS 180
R + + VA++M+ L T+ + + + +M K IRH+P++DG R+VG++S
Sbjct: 59 ASTDREAVFDKTVADLMS--TTLTTMQPNDQVDEVLTIMLKKRIRHMPILDGNRLVGIVS 116
Query: 181 IVDVVRAVVEQQKGELKRLNEFIRGE 206
I D V+A + + + E K L +I E
Sbjct: 117 IGDAVKAKIAKTEEENKNLKNYIYSE 142
>gi|73540949|ref|YP_295469.1| hypothetical protein Reut_A1254 [Ralstonia eutropha JMP134]
gi|72118362|gb|AAZ60625.1| CBS [Ralstonia eutropha JMP134]
Length = 148
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILQIKGN----TLYTVTPDTALLVAVHTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S T + ++M D T+ +D N ++M ++H R++P++D R +
Sbjct: 54 EIIETLAKNGGSVGTTSIRKVMDDAPLTCTMETDVN--EVRRMMLERHTRYLPILDNRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVEDQSFENKMLKAYIR 140
>gi|170695907|ref|ZP_02887047.1| CBS domain containing protein [Burkholderia graminis C4D1M]
gi|170139205|gb|EDT07393.1| CBS domain containing protein [Burkholderia graminis C4D1M]
Length = 152
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D T+ DAV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDATLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S + + ++M D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILTLKENGGSVGTSTIRKVMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVMESRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|397565547|gb|EJK44669.1| hypothetical protein THAOC_36775, partial [Thalassiosira oceanica]
Length = 332
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
V DAV+ A +N+G LV +I+G+ +ERDY+ KI G++ + T V EI T
Sbjct: 202 VYDAVQKFAAYNVGCLVTTD--SDGNISGVVSERDYVCKIALLGKTSRETSVREISTKSA 259
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
LIT + M M K IRH+P++ DG +VG++SI D+V+A +++++ ++ L+
Sbjct: 260 NLITASPSETVSDCMAKMLLKDIRHLPLLDEDGGVVGIVSIKDLVKAELKEKEEAIRTLS 319
Query: 201 EFIRGE 206
+F G+
Sbjct: 320 DFALGK 325
>gi|359398983|ref|ZP_09191993.1| hypothetical protein NSU_1679 [Novosphingobium pentaromativorans
US6-1]
gi|357599675|gb|EHJ61383.1| hypothetical protein NSU_1679 [Novosphingobium pentaromativorans
US6-1]
Length = 141
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 87/139 (62%), Gaps = 9/139 (6%)
Query: 66 KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ 125
+G D V L C+ TV +AV+ +A+ IG+L VL + +++AG+F+ERD + ++
Sbjct: 8 EGRDTV---LTCKVSTTVREAVEILAERRIGALPVL---DGENLAGMFSERDVIYRLREF 61
Query: 126 GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDV 184
G V+E+MT +T+ S +++ A+ +MT + IRH+PV++G R+VGM+SI D+
Sbjct: 62 GPGVLDKPVSEVMT--APAVTVESVTSVMTALAMMTRRRIRHLPVMEGARMVGMVSIGDL 119
Query: 185 VRAVVEQQKGELKRLNEFI 203
V+ +++ + E + E+I
Sbjct: 120 VKYRIDKVESEAAAMREYI 138
>gi|395491369|ref|ZP_10422948.1| hypothetical protein SPAM26_06034 [Sphingomonas sp. PAMC 26617]
Length = 143
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ +D +V AV +A+ IG++ VL + I GIF+ERD + + QG V
Sbjct: 16 VSVTADQSVRAAVALLAERRIGAVPVL---DGTRIVGIFSERDVIYAVASQGNDALGQTV 72
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQK 193
A+IMT IT+ SD ++ A+ LMT + IRH+PV+ D RIVGM+SI D+V+ +++ +
Sbjct: 73 ADIMT--APAITVGSDEAVIGALSLMTRRRIRHLPVVDDDRIVGMVSIGDLVKYRIDRIE 130
Query: 194 GELKRLNEFIR 204
+ + + +I+
Sbjct: 131 ADAEAMRSYIQ 141
>gi|302526647|ref|ZP_07278989.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302435542|gb|EFL07358.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 139
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
+ T D + +C R DTV DA + MA+ +G+L V GE + G+ T+RD + K+
Sbjct: 1 MTTARDLMTPNAVCVRESDTVNDAARTMAREQLGALPVC--GEDNRLKGMLTDRDIVVKV 58
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISI 181
+ +G+ P+ E+ + + +T+ +D ++ +Q M+ +R +PVIDG +VG+++
Sbjct: 59 IAEGKDPRAVHAGELA--QGEAVTIGADDDVAEILQTMSQHRVRRLPVIDGHDLVGVVAQ 116
Query: 182 VDVVRAVVEQQKGEL 196
DV RA+ G L
Sbjct: 117 ADVARALPNPDTGVL 131
>gi|288956922|ref|YP_003447263.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
gi|288909230|dbj|BAI70719.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
Length = 153
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C TV DA MA+ I +++V E + + GI TERD ++V G P+ T ++
Sbjct: 18 CLPPGATVRDAATLMAERRIAAVLV---TEGRALKGIVTERDMTTRVVAAGLDPETTPLS 74
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRAVVEQQKG 194
+MT + TL A L A+ LM +H RH+PV +DG +VGM+SI D+ V +
Sbjct: 75 SVMTADPD--TLEPSATALAALDLMERRHYRHLPVAVDGEVVGMVSIRDLFAVVRTHLED 132
Query: 195 ELKRLNEFIRGEYY 208
EL+ ++ G Y
Sbjct: 133 ELRSREAYMFGSGY 146
>gi|87198179|ref|YP_495436.1| signal-transduction protein [Novosphingobium aromaticivorans DSM
12444]
gi|87133860|gb|ABD24602.1| putative signal-transduction protein with CBS domains
[Novosphingobium aromaticivorans DSM 12444]
Length = 142
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 91/149 (61%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A+V+ +G+ W C +DD+V DAV +A++ IG+L V + G +AGIF+ER
Sbjct: 1 MTIAQVIAGRGE----VW-SCHADDSVADAVDMLARYRIGALPV-EDGTNG-VAGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R + G + + +V ++MT ++T+ ++L A+ LMT + RH+PV++ G +
Sbjct: 54 DMIRCLHKHGEAALHMKVRDMMT--APVVTITPQTSVLEALALMTQRRFRHLPVVEGGHM 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
V +SI D+V+ +++ + E + +I+
Sbjct: 112 VAFVSIGDLVKHRIDKIEAEADAMRVYIQ 140
>gi|418722236|ref|ZP_13281407.1| CBS domain protein [Leptospira borgpetersenii str. UI 09149]
gi|410741546|gb|EKQ90302.1| CBS domain protein [Leptospira borgpetersenii str. UI 09149]
Length = 146
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L + +V DAVK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKL---LSVEPETSVMDAVKFMTKYDIGSVIILTEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
G V+E+M+ L T+ + ++ + +M K IRH+P++ DG +VG++SI
Sbjct: 60 AELGLDFFKKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGFLVGIVSI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYSE 142
>gi|345870085|ref|ZP_08822040.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
gi|343922472|gb|EGV33174.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
Length = 142
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
Query: 69 DKVGSWLCCRSDD-TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
D+ GS L + D +V +A+ MA+ IG++VV+ + G+ +ERDY R V R
Sbjct: 9 DQKGSRLWSIAPDASVYEALALMAERRIGAVVVI---DDTGPIGLLSERDYARDAVHNTR 65
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
SPK T V +IMT ++ P + + AM +MT++ +RH+PV+ DG I+G+ISI D+V+
Sbjct: 66 SPKETLVRDIMT--RHVVCAPPELTLDQAMAVMTERCVRHLPVLDDGVILGIISIRDIVK 123
Query: 187 AVVEQQKGELKRLNEFI 203
++ E ++ ++RL +
Sbjct: 124 SLNEGRRFAVERLERIL 140
>gi|116328556|ref|YP_798276.1| signal transduction protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331285|ref|YP_801003.1| signal transduction protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|418738316|ref|ZP_13294712.1| CBS domain protein [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|421093234|ref|ZP_15553961.1| CBS domain protein [Leptospira borgpetersenii str. 200801926]
gi|116121300|gb|ABJ79343.1| Signal transduction protein containing cAMP- binding and CBS
domains [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124974|gb|ABJ76245.1| Signal transduction protein containing cAMP- binding and CBS
domains [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|410364197|gb|EKP15223.1| CBS domain protein [Leptospira borgpetersenii str. 200801926]
gi|410746490|gb|EKQ99397.1| CBS domain protein [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456888090|gb|EMF99088.1| CBS domain protein [Leptospira borgpetersenii str. 200701203]
Length = 146
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L + +V DAVK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKL---LSVEPETSVMDAVKFMTKYDIGSVIILTEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
G V+E+M+ L T+ + ++ + +M K IRH+P++ DG +VG++SI
Sbjct: 60 AELGLDFFKKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYSE 142
>gi|58581433|ref|YP_200449.1| hypothetical protein XOO1810 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84623368|ref|YP_450740.1| hypothetical protein XOO_1711 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577328|ref|YP_001914257.1| hypothetical protein PXO_01671 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58426027|gb|AAW75064.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84367308|dbj|BAE68466.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188521780|gb|ACD59725.1| CBS domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 104
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ GI +ER Y RK+V + RS T VAEIM+ E ++ PSD + MQLMTD RH+
Sbjct: 9 LVGIVSERHYARKVVLRDRSSSTTSVAEIMSAEVVTVS-PSD-TVERCMQLMTDGRFRHL 66
Query: 169 PVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
PV+ +GR+ G+ISI D+V+AV+E Q+ ++ +L +I
Sbjct: 67 PVVENGRVQGVISIGDLVKAVIEAQQQDIDQLQRYI 102
>gi|398332462|ref|ZP_10517167.1| signal transduction protein [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 146
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L + +V DAVK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKL---LSVEPETSVMDAVKFMTKYDIGSVIILTEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
G V+E+M+ L T+ + ++ + +M K IRH+P++ DG +VG++SI
Sbjct: 60 AELGLDFFKKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYNE 142
>gi|359726262|ref|ZP_09264958.1| signal transduction protein [Leptospira weilii str. 2006001855]
gi|421098216|ref|ZP_15558888.1| CBS domain protein [Leptospira borgpetersenii str. 200901122]
gi|410798768|gb|EKS00856.1| CBS domain protein [Leptospira borgpetersenii str. 200901122]
gi|456863849|gb|EMF82292.1| CBS domain protein [Leptospira weilii serovar Topaz str. LT2116]
Length = 146
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L + +V DAVK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKL---LSVEPETSVMDAVKFMTKYDIGSVIILTEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
G V+E+M+ L T+ + ++ + +M K IRH+P++ DG +VG++SI
Sbjct: 60 AELGLDFFKKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYNE 142
>gi|339324215|ref|YP_004683908.1| inosine-5'-monophosphate dehydrogenase [Cupriavidus necator N-1]
gi|338164372|gb|AEI75427.1| inosine-5'-monophosphate dehydrogenase GuaB [Cupriavidus necator
N-1]
Length = 146
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 79/125 (63%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A++ MA+ IG+L+V++ G I GI +ERDY RK++ R+ + T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHGA---IQGIVSERDYARKVILMQRTSRETLVRDIMT-- 78
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLN 200
N +I + + M LMT +RH+PV++G ++GM+SI D+V+ ++ +Q+ +++L
Sbjct: 79 NAVIYVGASQTTDECMALMTRHRLRHLPVMEGEELIGMLSIGDLVKDIISEQQFIIEQLE 138
Query: 201 EFIRG 205
+I G
Sbjct: 139 HYITG 143
>gi|224000862|ref|XP_002290103.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
gi|220973525|gb|EED91855.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
Length = 192
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V +AV+ A +NIG LV + I+G+ +ERDY+ K+ G++ K + EI T
Sbjct: 59 DLPVYEAVQKFAAYNIGCLVT--TDKDGKISGVVSERDYVCKVALLGKTSKDVSIKEIST 116
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELK 197
LIT + + + M M K IRH+P++ DG +VG++SI D+V++ +++++ +K
Sbjct: 117 KSANLITASPNETVSNCMAKMLMKDIRHLPLLDNDGGVVGIVSIKDLVKSELKEKEEAIK 176
Query: 198 RLNEFIRGE 206
L++F G+
Sbjct: 177 ALSDFALGK 185
>gi|114704331|ref|ZP_01437239.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
gi|114539116|gb|EAU42236.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
Length = 176
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ +D +V +AV M++ +IGS+VV+ P E+ + G+ TERD ++++V QG+ PK T++
Sbjct: 16 VTFSADTSVAEAVAEMSKRDIGSVVVVGPDEK--VEGLVTERDVMKRLVNQGKDPKTTQL 73
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--RIVGMISIVDVV 185
A+IMT E ++ +D ++L +++M+++ R +PVID RIV +++ D V
Sbjct: 74 ADIMTRELRMAR--ADDDLLDWLRIMSNERFRRLPVIDADNRIVAIMTQGDFV 124
>gi|295677060|ref|YP_003605584.1| hypothetical protein BC1002_2012 [Burkholderia sp. CCGE1002]
gi|295436903|gb|ADG16073.1| CBS domain containing protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D T+ DAV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTTLHDAVITMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S + + ++M D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILTLKENGGSVGTSTIRKVMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVMESRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|302533033|ref|ZP_07285375.1| signal-transduction protein [Streptomyces sp. C]
gi|302441928|gb|EFL13744.1| signal-transduction protein [Streptomyces sp. C]
Length = 137
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C +DD++ DA K MA +G+L + G Q + G+ T+RD + K++G G+ P
Sbjct: 14 CVGADDSILDAAKKMADLGVGALPIC--GSDQRLKGMLTDRDIVVKVLGAGKDPATCTAG 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKG 194
E + + +T+ +D + ++ MT+ +R +PVIDG +VG+++ DV R++ + Q G
Sbjct: 72 EFA--QGEAVTIGADDDTAEILRTMTEHKVRRLPVIDGHTLVGIVAQADVARSLPDPQVG 129
Query: 195 EL 196
EL
Sbjct: 130 EL 131
>gi|300787075|ref|YP_003767366.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384150417|ref|YP_005533233.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399538958|ref|YP_006551620.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299796589|gb|ADJ46964.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340528571|gb|AEK43776.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398319728|gb|AFO78675.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 138
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
+ T D C R DTV DA MA+ +G+L + GE + G+ T+RD + K+
Sbjct: 1 MTTARDIMTSDATCARESDTVHDAAVTMARKGVGALPIC--GEDNRLKGMITDRDIVVKV 58
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISI 181
+ +G+ P+ V E+ + +++T+ +D + ++ M++ +R +PVIDG +VG+++
Sbjct: 59 LAEGKDPRAVHVGELA--QGEVVTIGADDDAQEILRTMSEHRVRRLPVIDGHDLVGIVAQ 116
Query: 182 VDVVRAVVEQQKGEL 196
DV RA+ GEL
Sbjct: 117 ADVARALSNPSAGEL 131
>gi|359685491|ref|ZP_09255492.1| signal transduction protein [Leptospira santarosai str. 2000030832]
gi|410448444|ref|ZP_11302520.1| CBS domain protein [Leptospira sp. Fiocruz LV3954]
gi|418743678|ref|ZP_13300037.1| CBS domain protein [Leptospira santarosai str. CBC379]
gi|418752766|ref|ZP_13309024.1| CBS domain protein [Leptospira santarosai str. MOR084]
gi|421112794|ref|ZP_15573250.1| CBS domain protein [Leptospira santarosai str. JET]
gi|422005658|ref|ZP_16352832.1| signal transduction protein [Leptospira santarosai serovar Shermani
str. LT 821]
gi|409967005|gb|EKO34844.1| CBS domain protein [Leptospira santarosai str. MOR084]
gi|410017716|gb|EKO79772.1| CBS domain protein [Leptospira sp. Fiocruz LV3954]
gi|410795073|gb|EKR92970.1| CBS domain protein [Leptospira santarosai str. CBC379]
gi|410801809|gb|EKS07971.1| CBS domain protein [Leptospira santarosai str. JET]
gi|417255646|gb|EKT85109.1| signal transduction protein [Leptospira santarosai serovar Shermani
str. LT 821]
gi|456873204|gb|EMF88613.1| CBS domain protein [Leptospira santarosai str. ST188]
Length = 146
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L + +V DAVK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKL---LSVEPETSVMDAVKFMTKYDIGSVIILTEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
G V+E+M+ L T+ + ++ + +M K IRH+P++ DG +VG++SI
Sbjct: 60 AELGLDFFKKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGVLVGIVSI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYSE 142
>gi|374370955|ref|ZP_09628944.1| hypothetical protein OR16_36032 [Cupriavidus basilensis OR16]
gi|373097512|gb|EHP38644.1| hypothetical protein OR16_36032 [Cupriavidus basilensis OR16]
Length = 148
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 88/149 (59%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + + ++ AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILQIKGN----TLYTVKPETSLLLAVNIMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ + G + T + ++M D T+ +D N ++M ++H R++PV+D R +
Sbjct: 54 EIIKTLSANGGNVGTTSLRKVMDDAPLTCTMETDVN--EVRRMMLERHTRYLPVLDNRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQSFENRMLKAYIR 140
>gi|239814685|ref|YP_002943595.1| CBS domain containing protein [Variovorax paradoxus S110]
gi|239801262|gb|ACS18329.1| CBS domain containing protein [Variovorax paradoxus S110]
Length = 146
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + DD + +AVK MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLFTITPDDLLAEAVKTMAEKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + IV G T V + M D TL +D + + ++M ++H R++PV+D R +
Sbjct: 54 EVILAIVDNGGQVGGTLVRKAMDDAPVTCTLETDLDEIR--RIMLERHARYMPVMDKRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|389878299|ref|YP_006371864.1| hypothetical protein TMO_2442 [Tistrella mobilis KA081020-065]
gi|388529083|gb|AFK54280.1| hypothetical protein TMO_2442 [Tistrella mobilis KA081020-065]
Length = 144
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ A++ +AQ NIG+L V++ G I G+ +ERD R +V +G + T V E+MT
Sbjct: 22 TISRALEILAQDNIGALPVVRDG---RIVGMLSERDVARGLVDRGAALLDTPVTELMT-- 76
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKRL 199
+L T + I M +MT + IRHVPV+ DG + GMISI DVV+ +++ + E + L
Sbjct: 77 TRLTTCRPETTIEELMTMMTMRRIRHVPVLGEDGDLTGMISIGDVVKCRLDELETEAQAL 136
Query: 200 NEFIRG 205
+++ G
Sbjct: 137 RDYVAG 142
>gi|377820430|ref|YP_004976801.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
gi|357935265|gb|AET88824.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
Length = 150
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D V DAV MA H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTPVSDAVDTMAAHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G + T + +IM D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILTLHNNGGAVGTTTIRKIMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVMEKRQL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|427431006|ref|ZP_18920702.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
gi|425878183|gb|EKV26902.1| putative signal-transduction protein [Caenispirillum salinarum AK4]
Length = 150
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A + M NI ++++++ + + GI TERD + V +G P+ TRV EIMT +
Sbjct: 23 TVRTAAELMRDRNIAAVMIVR---DERLIGIMTERDIAARAVARGVDPQTTRVEEIMTAD 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
TL +D + A+++M + + RH+PV+ DGR VGM+SI D+ V + + +++ +
Sbjct: 80 PD--TLEADDPAMTALKMMREHNYRHLPVVKDGRPVGMVSIRDLYAVVQSELESDIRNRD 137
Query: 201 EFIRGEYY 208
+I GE Y
Sbjct: 138 AYIFGENY 145
>gi|393722761|ref|ZP_10342688.1| signal-transduction protein [Sphingomonas sp. PAMC 26605]
Length = 142
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L +KG + V + +V DAV +A+ +G++ V+ E + GIF+ER
Sbjct: 1 MTIAAILSSKGREVV----SITAKQSVGDAVALLAERRVGAVPVM---EGDAVVGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D + I G VAE MT IT+ D ++ A+ LMT + IRH+PV+D GR+
Sbjct: 54 DVIHAIAAHGGDAMTRSVAETMTAPP--ITVAPDEAVIGALSLMTRRRIRHLPVVDQGRV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G +SI D+V+ +++ + + + + +I+
Sbjct: 112 IGFVSIGDLVKYRIDKIEADAEAMRSYIQ 140
>gi|357974039|ref|ZP_09138010.1| signal-transduction protein [Sphingomonas sp. KC8]
Length = 151
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
++++A +L KG + + + V D V +A IG++ V+ + +AGI +E
Sbjct: 9 DMTIATILGGKGH----AVISVSTGTPVSDVVALIASKRIGAVPVM---DGDTVAGILSE 61
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RD + + G + V ++MT IT+ D ILHA+ LMT + +RH+PV+D GR
Sbjct: 62 RDIIYHLQSDGAAILDWPVEKVMT--APAITVAGDVRILHALSLMTKRRVRHLPVVDQGR 119
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+VG++SI D+V+A +++ + E + ++I+G
Sbjct: 120 LVGLVSIGDLVKARIDRIEAEANAMRDYIQG 150
>gi|294010055|ref|YP_003543515.1| hypothetical protein SJA_C1-00690 [Sphingobium japonicum UT26S]
gi|390169622|ref|ZP_10221555.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
gi|292673385|dbj|BAI94903.1| CBS domain protein [Sphingobium japonicum UT26S]
gi|389587626|gb|EIM65688.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
Length = 142
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L KG D V +S DTV V+ +AQ IG + V+ GE + GIF+ER
Sbjct: 1 MTIAAILQRKGQDVVQ----VQSSDTVLSVVRLLAQRRIGCVPVVDDGE---VVGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D ++ +G + V EIMT IT + H + LMT + IRH+PV+ DG +
Sbjct: 54 DLAYRVAQEGAAVLDRPVGEIMT--APAITTDDRTPVNHCLSLMTKRRIRHLPVVVDGAL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG++SI D+V+ ++ + E L ++I+
Sbjct: 112 VGLVSIGDLVKFRIDSIESEAAALRDYIQ 140
>gi|307730415|ref|YP_003907639.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307584950|gb|ADN58348.1| CBS domain containing protein [Burkholderia sp. CCGE1003]
Length = 152
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + DAV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTPLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S + + ++M D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILTLKENGGSVGTSTIRKVMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVLESRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|374293294|ref|YP_005040329.1| hypothetical protein AZOLI_2946 [Azospirillum lipoferum 4B]
gi|357425233|emb|CBS88119.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum lipoferum 4B]
Length = 153
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C TV DA MA+ I +++V E + + GI TERD ++V G P T ++
Sbjct: 18 CLPPGATVRDAATLMAEKRIAAVLV---TEGRTLKGIVTERDMTTRVVAAGLDPDTTPLS 74
Query: 136 EIMT-DENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRAVVEQQK 193
+MT D + L+ PS A L A+ LM +H RH+P+ +DG +VGM+SI D+ V +
Sbjct: 75 SVMTADPDTLV--PS-ATALSALDLMERRHYRHLPIAVDGEVVGMVSIRDLFAVVRAHLE 131
Query: 194 GELKRLNEFIRGEYY 208
EL+ ++ G Y
Sbjct: 132 DELRSREAYMFGSGY 146
>gi|320161875|ref|YP_004175100.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
gi|319995729|dbj|BAJ64500.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
Length = 148
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L KG+ W DDT+ + +A+ N+G+L+V+ + + IAGI +ERD
Sbjct: 5 VEDILKEKGNQ---IW-SVSPDDTLLTTLLKLAEKNVGALLVM---DGERIAGIVSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R+I + MT++ +IT+ S + MQLMT HIRH+PV++ G++VG
Sbjct: 58 VREIALHRACVLDAPIKAFMTED--VITVNSQTTVDECMQLMTRAHIRHLPVVEGGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEYY 208
+ISI DVV+ V+E Q + L +I G+ +
Sbjct: 116 IISIGDVVKKVIEGQASMIDDLEGYITGDKF 146
>gi|417778503|ref|ZP_12426309.1| CBS domain protein [Leptospira weilii str. 2006001853]
gi|410781574|gb|EKR66147.1| CBS domain protein [Leptospira weilii str. 2006001853]
Length = 146
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D K+ L + V DAVK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKL---LSVEPETLVMDAVKFMTKYDIGSVIILTEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
G V+E+M+ L T+ + ++ + +M K IRH+P++ DG +VG++SI
Sbjct: 60 AELGLDFFKKSVSEVMS--TSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYNE 142
>gi|325968392|ref|YP_004244584.1| signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
gi|323707595|gb|ADY01082.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
Length = 147
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 76/119 (63%), Gaps = 7/119 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ C+S D + AV M HN+GS++++ E GIFTERD +R +V +G S T +
Sbjct: 31 ISCKSTDPITCAVAKMYMHNVGSILIID--EDGKPTGIFTERDLVR-VVAEGISLD-TPL 86
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQ 192
++M+ KLIT + +++ A M + +IRH+PV++ G+ VGM+SI D+VRA++ Q+
Sbjct: 87 MKVMS--KKLITANTSESVISAAMKMIENNIRHLPVVEEGKTVGMVSIRDLVRALMAQE 143
>gi|323526749|ref|YP_004228902.1| hypothetical protein BC1001_2426 [Burkholderia sp. CCGE1001]
gi|407714195|ref|YP_006834760.1| hypothetical protein BUPH_03003 [Burkholderia phenoliruptrix
BR3459a]
gi|323383751|gb|ADX55842.1| CBS domain containing protein [Burkholderia sp. CCGE1001]
gi|407236379|gb|AFT86578.1| CBS domain containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 152
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + DAV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTALHDAVVTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S + + ++M D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILTLKENGGSVGTSTIRKVMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVLESRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
Length = 624
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Query: 54 LENISVAEVLMTKGDDKV-GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPG--EQQHIA 110
L + + +E L T+ D + S + C +D TV++A + M + N+ SL+V++ Q +
Sbjct: 140 LRSTAASESLRTRVADLMETSLVTCSADATVQEAAQIMTERNVSSLLVMESAGANQSPLV 199
Query: 111 GIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV 170
GI T+RD R+++ + + P + V+E+MT + T+ D + AM LM ++ H+PV
Sbjct: 200 GIITDRDLRRRVLAEAK-PAESLVSEVMTGNPE--TISPDLLVFEAMLLMAERGYHHLPV 256
Query: 171 IDG-RIVGMISIVDVVRAV 188
DG R+VGMI I D++R++
Sbjct: 257 HDGTRVVGMIVIGDLLRSL 275
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR------IVGMISIVDVV 185
TRVA++M E L+T +DA + A Q+MT++++ + V++ +VG+I+ D+
Sbjct: 151 TRVADLM--ETSLVTCSADATVQEAAQIMTERNVSSLLVMESAGANQSPLVGIITDRDLR 208
Query: 186 RAVVEQQKGELKRLNEFIRG 205
R V+ + K ++E + G
Sbjct: 209 RRVLAEAKPAESLVSEVMTG 228
>gi|89899448|ref|YP_521919.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89344185|gb|ABD68388.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 140
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
+L + TV DA + MA N+G+++V+ +H+ GIFTERD + +++ +GR T+
Sbjct: 15 FLTAPPETTVSDAARLMADRNVGAVLVVA---DEHLLGIFTERDAVFRVIAKGRDANTTQ 71
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQ 192
+ E+MT + K TL HA+ +M + RHVPV+ +GR VG+IS + + +E+
Sbjct: 72 LTEVMTVDPK--TLEPGKTYGHALLIMQENGFRHVPVVENGRPVGIISSRNAMDPDLEEY 129
Query: 193 KGELKR 198
E +R
Sbjct: 130 VFEARR 135
>gi|271964532|ref|YP_003338728.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
gi|270507707|gb|ACZ85985.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
Length = 142
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV + ++ +A+HNIG++VV + G IAGI +ERD +R++ +G V+ IMT +
Sbjct: 22 TVTELLELLAEHNIGAVVVSEDGSS--IAGIVSERDVVRRLNDRGADVLTAPVSSIMTTD 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+ T P AN+ Q MT IRHVPV+ D R+ G++SI DVV++ +E + E L
Sbjct: 80 VR--TCPPTANVDDLRQTMTTHRIRHVPVVADDRLAGIVSIGDVVKSAIESLETEKAYLV 137
Query: 201 EFI 203
+++
Sbjct: 138 DYL 140
>gi|30250323|ref|NP_842393.1| hypothetical protein NE2398 [Nitrosomonas europaea ATCC 19718]
gi|30181118|emb|CAD86310.1| CBS domain [Nitrosomonas europaea ATCC 19718]
Length = 146
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
DD+V +A++ MA NIG+L+V+K + + GI TERD+ RK + K T+V EIMT
Sbjct: 21 DDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ + L + M L+T+ +RH+PV+ DG+++G++SI D+V+ + Q + + +
Sbjct: 78 RQVAYVDLNNTNE--DCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAISQHQFVINQ 135
Query: 199 LNEFI 203
L +I
Sbjct: 136 LERYI 140
>gi|186476329|ref|YP_001857799.1| CBS domain-containing protein [Burkholderia phymatum STM815]
gi|184192788|gb|ACC70753.1| CBS domain containing protein [Burkholderia phymatum STM815]
Length = 165
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D V +AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 11 MRVSDILKVKGN----TLFTVTPDTEVNEAVTTMAEHDIGSLVVMEYGD---LVGMLTFR 63
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S T + +IM D T +D N ++M + H+R++PV++ R +
Sbjct: 64 EIILVLSRNGGSVGSTTIRKIMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVMESRKL 121
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 122 MGVISFYDVAKAVVEEQGFENRMLKAYIR 150
>gi|298714864|emb|CBJ25763.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 210
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +AV+ A +NIG+L V + + + GI +ERDY+ K+ G++ K T V EI T
Sbjct: 78 TVYEAVQRFAAYNIGALAV--TNDDKKVIGIVSERDYVSKVALLGKASKSTPVKEIATMG 135
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID---GRIVGMISIVDVVRAVVEQQKGELKR 198
L+ + M M + IRH+PV+D G++VGM+S+ D+++ V +++ L +
Sbjct: 136 ANLVIASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKEVTREKEEILTK 195
Query: 199 LNEFI--RGEYY 208
+ +F RG ++
Sbjct: 196 VTDFKLGRGGFF 207
>gi|374293836|ref|YP_005040859.1| hypothetical protein AZOLI_p30353 [Azospirillum lipoferum 4B]
gi|357427239|emb|CBS90180.1| conserved protein of unknown function with CBS domain [Azospirillum
lipoferum 4B]
Length = 144
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA VL KG+ + DD V + + +H IG+++V+ Q GI +ERD
Sbjct: 3 VAAVLKRKGN----RIVSAAPDDPVAAVTRLLTEHRIGAVLVMDDDGQP--VGILSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLIT-LPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
+R + G + A++MT LIT P+D + M +MT++ IRHVP+ID GR+V
Sbjct: 57 VRAVARDGAAALERPAADLMT--RGLITGTPTD-TVADMMAVMTERRIRHVPIIDSGRVV 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV+A ++ + E++ L ++ G
Sbjct: 114 GVISIGDVVKARIDDAELEVESLRGYVAG 142
>gi|392378468|ref|YP_004985628.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
gi|356879950|emb|CCD00887.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
Length = 144
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A VL KG + + DD ++ + +A H IG+++V++ + AGI +ERD
Sbjct: 3 IAAVLKRKGTE----IITANPDDRIDAVARKLAHHKIGAVLVMR--DDGRPAGILSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + G S V E+MT L+T + M +MT + IRH+P++ DG +VG
Sbjct: 57 VRAVAADGASALERPVGELMT--RDLVTGSPADTVSQIMGVMTQRRIRHLPILEDGELVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
++SI D+V+A ++ + E++ L ++ G
Sbjct: 115 LVSIGDIVKARLDDAELEVESLRGYVAG 142
>gi|288961578|ref|YP_003451888.1| signal-transduction protein with CBS domains [Azospirillum sp.
B510]
gi|288913858|dbj|BAI75344.1| signal-transduction protein with CBS domains [Azospirillum sp.
B510]
Length = 144
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA VL KG+ + DD+V + + +H IG+++V+ + GI +ERD
Sbjct: 3 VAAVLKRKGN----RIVSAAPDDSVAAVTRLLTEHRIGAVLVMD--DDGKPVGILSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R + G + ++MT LIT + I M +MT++ IRHVP++D GR+VG
Sbjct: 57 VRAVARDGAAALERPATDLMT--RDLITASPNDTIADMMAVMTERRIRHVPILDSGRVVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ISI DVV+A ++ + E++ L ++ G
Sbjct: 115 VISIGDVVKARIDDAELEVESLRGYVAG 142
>gi|398382452|ref|ZP_10540537.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Sphingobium sp. AP49]
gi|397726558|gb|EJK86991.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Sphingobium sp. AP49]
Length = 142
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L KG D V +S D+V V +A IG + V+ G + GIF+ER
Sbjct: 1 MTIAAILQGKGRDVVQ----VQSTDSVLSVVTLLADRRIGCVPVVDGGR---VVGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D + ++ QG VA++MT IT+ ++HA+ LMT + IRH+PV+ DG +
Sbjct: 54 DVVYRLAQQGAEALNHTVADVMT--QPAITIDDQMPVIHALSLMTKRRIRHLPVVADGAL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++SI D+V+ ++ + E L ++I+
Sbjct: 112 IGLVSIGDLVKFRIDNIESEAAALRDYIQ 140
>gi|413962959|ref|ZP_11402186.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
gi|413928791|gb|EKS68079.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
Length = 150
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + DA+ MA H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTPLSDAIDTMAAHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S T + ++M D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILTLHNNGGSVGATTIRKVMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVMEKRQL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|358637076|dbj|BAL24373.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. KH32C]
Length = 143
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
+ L +D +V +A + MA +G++++ G + +AGIFTERD L K++ G P T
Sbjct: 13 AILTATADLSVREATRRMADAKVGAIMITAKGGK--LAGIFTERDALVKVLANGVDPDKT 70
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVV 185
+A++MT + T +D N+ +A+ +M D RHVPV+D G VGMIS D +
Sbjct: 71 TLAQVMTSDPT--TANADKNLGYALHMMYDGGFRHVPVVDNGVPVGMISARDAL 122
>gi|339325439|ref|YP_004685132.1| hypothetical protein CNE_1c13000 [Cupriavidus necator N-1]
gi|338165596|gb|AEI76651.1| hypothetical protein CNE_1c13000 [Cupriavidus necator N-1]
Length = 148
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D ++ AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILQIKGN----TLYTVTPDTSLLVAVHTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + + T + ++M D T+ +D N ++M ++H R++PV+D R +
Sbjct: 54 EIIETLARNNGNVGSTSIRKVMDDAPLTCTMETDVN--EVRRMMLERHTRYLPVLDNRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVEDQSFENKMLKAYIR 140
>gi|334345906|ref|YP_004554458.1| putative signal transduction protein with CBS domains [Sphingobium
chlorophenolicum L-1]
gi|334102528|gb|AEG49952.1| putative signal transduction protein with CBS domains [Sphingobium
chlorophenolicum L-1]
Length = 142
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L KG D V + +S DTV V+ +AQ IG + V+ G + GIF+ER
Sbjct: 1 MTIAAILQRKGQDVVQA----QSSDTVLSVVRLLAQRRIGCVPVVDDG---RVVGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D ++ +G + V EIMT IT + H + LMT + IRH+PV+ DG +
Sbjct: 54 DLAYRVAQEGAAVLDRPVGEIMT--APAITTDGRTPVNHCLSLMTKRRIRHLPVVVDGAL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG++SI D+V+ ++ + E L ++I+
Sbjct: 112 VGLVSIGDLVKFRIDSIESEAAALRDYIQ 140
>gi|312795956|ref|YP_004028878.1| hypothetical protein RBRH_02954 [Burkholderia rhizoxinica HKI 454]
gi|312167731|emb|CBW74734.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 196
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Query: 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFT 114
E + V+++L KG+ + D + +AV+ MA+H+IGSLVV++ G+ + G+ T
Sbjct: 43 EAMRVSDILKVKGN----ALYTVTPDTPLSEAVQTMAEHDIGSLVVIEFGD---LVGMLT 95
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR 174
R+ + + +G S + ++M D T +D N ++M ++H R++PV++ R
Sbjct: 96 FREIILTLRDRGGSVDAVTIRKVMDDHPLTCTPETDIN--EVRRMMLERHARYLPVMEKR 153
Query: 175 -IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV RAVVE+Q E + L +IR
Sbjct: 154 TLMGVISFYDVARAVVEEQGFENRMLKAYIR 184
>gi|375104206|ref|ZP_09750467.1| CBS domain-containing protein [Burkholderiales bacterium JOSHI_001]
gi|374664937|gb|EHR69722.1| CBS domain-containing protein [Burkholderiales bacterium JOSHI_001]
Length = 154
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L+ KG G+ D + +AVK MA +IGSLVV+ G+ + G+ T R
Sbjct: 1 MKVSDILLVKG----GTLFTVSPDSPLAEAVKTMADRDIGSLVVMSHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ +V S T V +M D +T + I ++M +H R++P +DGR +
Sbjct: 54 EVIKAVVKNNGSVGDTVVRSVMDDAP--LTCTPETEIDEVRRMMLGRHARYMPALDGRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVDGQDFENRMLKAYIR 140
>gi|134099698|ref|YP_001105359.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|291008298|ref|ZP_06566271.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|133912321|emb|CAM02434.1| putative signal-transduction protein with CBS domains
[Saccharopolyspora erythraea NRRL 2338]
Length = 143
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 88/147 (59%), Gaps = 11/147 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
++E+L KG D R V + ++ +A HNIG++ V+ GE + + GI +ERD
Sbjct: 3 ISEILSKKGSD----VATIRPTAAVSELLRMLAHHNIGAMAVV--GEGEDLLGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLIT-LPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
+R++ +G VAEIMT +IT P+DA + ++MT++ IRH+PV++ G +V
Sbjct: 57 VRRLDERGAELLTATVAEIMT--TSVITCTPADA-VESLTEIMTERRIRHLPVVEGGALV 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI DVV++ ++ + ++L +I
Sbjct: 114 GIVSIGDVVKSRIDALEQSQEQLESYI 140
>gi|385682177|ref|ZP_10056105.1| hypothetical protein AATC3_39898 [Amycolatopsis sp. ATCC 39116]
Length = 142
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 89/147 (60%), Gaps = 12/147 (8%)
Query: 59 VAEVLMTKGDDKVGSWLCC-RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+A++L +KG+ W+ R + ++ D + +A+HN+G++VV + IAGI +ERD
Sbjct: 3 IADLLRSKGN-----WVATVRPESSITDLLAGLAEHNVGAMVV---AGEDGIAGIVSERD 54
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
+RK+ G + V+EIMT T P D ++ LMT + +RHVPV++G R+V
Sbjct: 55 VVRKLNEHGPALLEHPVSEIMTTVVATCT-PRD-SVDDLSVLMTQRRVRHVPVMEGGRLV 112
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI DVV++ +E+ + ++L +I
Sbjct: 113 GIVSIGDVVKSRMEELEATQQQLAAYI 139
>gi|311743920|ref|ZP_07717726.1| cystathionine beta-synthase [Aeromicrobium marinum DSM 15272]
gi|311313050|gb|EFQ82961.1| cystathionine beta-synthase [Aeromicrobium marinum DSM 15272]
Length = 142
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V +++ TKG D V + + +V + + +A+H+IG+LVV G++ +AGI +ERD
Sbjct: 3 VRDIMTTKGSDVVHT---ISPEASVRELLDLLAEHDIGALVVSTDGDR--LAGIVSERDV 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+RK+ G P VA IMT E +IT D + M +MT + +RHVPV+ DG +VG
Sbjct: 58 VRKLRGVP-DPNAATVATIMTAE--VITCGPDDSAGSLMAIMTQRRVRHVPVVDDGHLVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIR 204
++S+ D V+ ++Q + E +L +++
Sbjct: 115 ILSVGDAVKHRMDQLEFERDQLTSYLQ 141
>gi|408417854|ref|YP_006759268.1| hypothetical protein TOL2_C03940 [Desulfobacula toluolica Tol2]
gi|405105067|emb|CCK78564.1| conserved uncharacterized protein, CBS domain [Desulfobacula
toluolica Tol2]
Length = 149
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 7/137 (5%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR-KIVGQGR 127
D G + D TVE A+K M+ +++ +LVV+ Q GIFTERD +R I+ R
Sbjct: 9 DNAGCFHIIDQDQTVEQALKLMSGYSVSALVVMTKTASQ---GIFTERDLVRCHILFPDR 65
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
+ ++ E+MT +KLI + + I +AM +M IRH+PV+ DGRI GMI + D+V+
Sbjct: 66 NISTIQIKEVMT--SKLIVVEPEDTIDNAMGMMIKAKIRHLPVVSDGRIKGMICLEDLVK 123
Query: 187 AVVEQQKGELKRLNEFI 203
V EL L ++I
Sbjct: 124 KHVGVLTQELHYLKDYI 140
>gi|452752736|ref|ZP_21952477.1| CBS domain protein [alpha proteobacterium JLT2015]
gi|451960127|gb|EMD82542.1| CBS domain protein [alpha proteobacterium JLT2015]
Length = 118
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 80/119 (67%), Gaps = 6/119 (5%)
Query: 87 VKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLIT 146
++ + +H IG+++VL+ G+Q IAG+ +ERD +R + QG + +++MT + ++T
Sbjct: 3 IETLVEHRIGAVLVLE-GDQ--IAGVLSERDIVRCLAEQGEAALSKCASDLMTAD--VVT 57
Query: 147 LPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+ D ++ AM MT + RH+PV+D GR+VG++S+ D+V+A +++ + E + L ++I+
Sbjct: 58 VAPDESVYEAMSNMTRRRFRHLPVVDRGRLVGIVSMGDLVKARIDEAEREAESLKDYIQ 116
>gi|402820645|ref|ZP_10870212.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
gi|402511388|gb|EJW21650.1| hypothetical protein IMCC14465_14460 [alpha proteobacterium
IMCC14465]
Length = 143
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK L S + + DA+ + ++G LV P E +AG+ +ERD +R + G S
Sbjct: 9 DKGTDVLTIDSSNKLSDAIAVLENRSVGILVATSPDEP--LAGVISERDVVRALSNHGAS 66
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRA 187
+++ M+ I L + ++ AM++MT+K IRH+PVID G+I G++SI DVV+
Sbjct: 67 ALDRPISDFMSSNPVTINL--ETTVVEAMEIMTEKRIRHLPVIDNGKICGLVSIGDVVKR 124
Query: 188 VVEQQKGELKRLNEFI 203
+ + E + L +I
Sbjct: 125 RIMDTEAEAEALKSYI 140
>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
gi|158332181|dbj|BAF89666.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
Length = 143
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
+ K S + D ++ DAVK++++H IG++V + + +AGI +ERD +R + +G
Sbjct: 8 NSKPSSMVTISPDASLTDAVKSLSEHRIGAIVAVD--DNGRLAGILSERDVVRILGVRGP 65
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
V+ +MT ++T D I M+ MT RHVPV++G R++G+ISI DVV+
Sbjct: 66 EVLSEPVSAVMT--RAVVTCARDETIQGIMERMTRGRFRHVPVVEGERLIGIISIGDVVK 123
Query: 187 AVVEQQKGELKRLNEFI 203
VE+ + E +L ++I
Sbjct: 124 FRVEEMERESAQLRDYI 140
>gi|163843518|ref|YP_001627922.1| hypothetical protein BSUIS_A1304 [Brucella suis ATCC 23445]
gi|225627721|ref|ZP_03785758.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225852750|ref|YP_002732983.1| hypothetical protein BMEA_A1301 [Brucella melitensis ATCC 23457]
gi|237815671|ref|ZP_04594668.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|256369677|ref|YP_003107187.1| hypothetical protein BMI_I1267 [Brucella microti CCM 4915]
gi|297248558|ref|ZP_06932276.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340790871|ref|YP_004756336.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
gi|163674241|gb|ABY38352.1| CBS domain containing protein [Brucella suis ATCC 23445]
gi|225617726|gb|EEH14771.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225641115|gb|ACO01029.1| CBS domain containing protein [Brucella melitensis ATCC 23457]
gi|237788969|gb|EEP63180.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|255999839|gb|ACU48238.1| CBS domain containing protein [Brucella microti CCM 4915]
gi|297175727|gb|EFH35074.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340559330|gb|AEK54568.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
Length = 157
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 12/162 (7%)
Query: 43 SSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLK 102
++++ P + G+ +V +L TKG D V S DT+ AV + +H IG+LVV
Sbjct: 4 AANAKPWRDFGM---TVRSILETKGRDVV----VIASADTLSQAVAMLNKHKIGALVVCD 56
Query: 103 PGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTD 162
E HI GI +ERD +R + Q VAE+MT +K+ I M++MT
Sbjct: 57 --EAGHIEGILSERDVVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTR 112
Query: 163 KHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
RH+PV + G++VG+ISI DVV+ +E + E + + +I
Sbjct: 113 SRFRHMPVEEGGKLVGIISIGDVVKRRIEDVEREAEDIRTYI 154
>gi|84515564|ref|ZP_01002926.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
gi|84510847|gb|EAQ07302.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
Length = 144
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 85/148 (57%), Gaps = 8/148 (5%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L TK D V S + D V DAV ++Q+ IG++VV G+ + GI +ERD
Sbjct: 3 VGQILKTKADMGVVS---VKPTDMVTDAVTLLSQNRIGTVVV--SGDGVTLDGILSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R++ +G S V+EIMT + T A+++ +Q+MT+ RH+PV+D G ++G
Sbjct: 58 VRELGKRGVSCLSAPVSEIMTAKLTTCTTADSADLV--LQMMTEGRFRHLPVMDNGTMIG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ISI DVV+A + + E L I G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIMG 143
>gi|441173370|ref|ZP_20969586.1| signal-transduction protein with CBS domain [Streptomyces rimosus
subsp. rimosus ATCC 10970]
gi|440614998|gb|ELQ78222.1| signal-transduction protein with CBS domain [Streptomyces rimosus
subsp. rimosus ATCC 10970]
Length = 138
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C ++D+V DA + + +G++ + G + G+ T+RD + K++G+G+ P T+
Sbjct: 14 CVGAEDSVLDAARKLTDLGVGAVPIC--GTDDKLKGVLTDRDIVVKVLGRGKDPAQTKAG 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKG 194
E+ + + +T+ +D + MT +R +PVIDG R+VGM+++ DV R++ + + G
Sbjct: 72 ELA--QGEAVTIGADDGTEEILATMTQHKVRRLPVIDGHRLVGMVALADVARSLPDAKAG 129
Query: 195 EL 196
+L
Sbjct: 130 DL 131
>gi|427404057|ref|ZP_18894939.1| hypothetical protein HMPREF9710_04535 [Massilia timonae CCUG 45783]
gi|425717296|gb|EKU80261.1| hypothetical protein HMPREF9710_04535 [Massilia timonae CCUG 45783]
Length = 150
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ D + DAV M++++IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSEILQVKGN----ILYTVTPDQPLVDAVTTMSENDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ L+ + G S V M D IT+ D + ++M +KH R++PV+D R +
Sbjct: 54 EVLKALHANGGSVGAGTVRRHMDDSP--ITVTPDTEVNEVRRIMLEKHARYLPVMDARTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV RAV+E Q E + L +IR
Sbjct: 112 LGVISFYDVARAVLEAQSFENRMLKAYIR 140
>gi|452949833|gb|EME55299.1| IMP dehydrogenase [Rhodococcus ruber BKS 20-38]
Length = 142
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 86/146 (58%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG D +VE+ + +A+HN+G+LVV+ E + GI +ERD
Sbjct: 3 IADVLRNKGP----VVATIEPDRSVEEMIGTLARHNVGALVVV---EGDAVIGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ G + RV +IM+ LP+D + + MT++ IRH+PV+ DGR+VG
Sbjct: 56 VRRLHHHGPALLAARVRDIMSTTVS-TCLPTD-TVDSLAETMTERRIRHLPVVVDGRMVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ +++ + E +L +I
Sbjct: 114 IVSIGDVVKSRIDELQCERDQLESYI 139
>gi|424778901|ref|ZP_18205839.1| hypothetical protein C660_18526 [Alcaligenes sp. HPC1271]
gi|422886330|gb|EKU28754.1| hypothetical protein C660_18526 [Alcaligenes sp. HPC1271]
Length = 153
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + + TVE AV++M++ +IGSLV+++ G+ + G+ T R
Sbjct: 2 LKVSEILRVKGD----TLYTGTPEMTVEKAVQSMSELDIGSLVIMEHGQ---LVGMLTFR 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ +R QG + V IM D +T + A+ +LM + H R++PV+DG ++
Sbjct: 55 EIIRHWHAQGDKAQGFTVRSIMDDAPVSVTPNTSAD--EVQRLMLNNHARYMPVMDGPVL 112
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS D+ RA+V Q+ E L +IR
Sbjct: 113 MGVISFFDMARAIVHAQQFENNMLKAYIR 141
>gi|319792508|ref|YP_004154148.1| cbs domain containing protein [Variovorax paradoxus EPS]
gi|315594971|gb|ADU36037.1| CBS domain containing protein [Variovorax paradoxus EPS]
Length = 151
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + DD + +A MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLFTITPDDLLAEAATTMAEKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + IV G T V + M D TL +D + + ++M ++H R++PV+D R +
Sbjct: 54 EVIVAIVNNGGQVGTTLVRKAMDDAPVTCTLETDLDEIR--RIMLERHARYMPVMDKRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|379708877|ref|YP_005264082.1| hypothetical protein NOCYR_2676 [Nocardia cyriacigeorgica GUH-2]
gi|374846376|emb|CCF63446.1| conserved protein of unknown function, putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 144
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 9/150 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+AE+L KG + R D TV + +A HNIG++VV G I GI +ERD
Sbjct: 3 IAEILRRKGSE----VATVRPDSTVRALLATLAAHNIGAVVVSSDGVG--ITGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + G V +IMT + + T D + + MTD IRH+PV+ DGR++G
Sbjct: 57 VRSLHQHGADLLDAPVEQIMTTDVR--TCDPDDLVDGLRRTMTDHRIRHLPVVRDGRLIG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
++SI DVV++ + + E ++L +++G Y
Sbjct: 115 IVSIGDVVKSAISELATEREQLVGYVQGLY 144
>gi|296284851|ref|ZP_06862849.1| hypothetical protein CbatJ_14581 [Citromicrobium bathyomarinum
JL354]
Length = 143
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
C++ + DAV +A+ IG+L V+ G+ +AGIF+ERD + + QG S V E
Sbjct: 18 CQTQTPMRDAVTLLAEKRIGALPVMDGGK---VAGIFSERDVIYCMAAQGPSCLERPVGE 74
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGE 195
+MT + IT+ D I A+ LMT + IRH+PV+ D ++G +SI D+V++ ++ + E
Sbjct: 75 VMT--SPAITVTRDQKIDQALALMTKRRIRHLPVVEDDALLGFVSIGDLVKSRFDEVERE 132
Query: 196 LKRLNEFIR 204
+ L +I+
Sbjct: 133 AEDLRSYIQ 141
>gi|158314906|ref|YP_001507414.1| signal-transduction protein [Frankia sp. EAN1pec]
gi|158110311|gb|ABW12508.1| putative signal-transduction protein with CBS domains [Frankia sp.
EAN1pec]
Length = 139
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 11/132 (8%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA+V MT+ VG D + +A + M N G ++VL +AGI T+RD
Sbjct: 4 TVADV-MTRNPATVGM------DQPIAEAARRMKTVNAGDVIVLD--NTGRVAGIVTDRD 54
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
++V +GR P+ T E+ T + LIT+ D A+QL+ ++HIR +PV+D GR V
Sbjct: 55 ITLRVVAEGRDPERTATREVCT-QTGLITIAPDTTTDTAVQLIRERHIRRLPVVDKGRPV 113
Query: 177 GMISIVDVVRAV 188
G+IS+ D+ RA+
Sbjct: 114 GVISLGDLARAL 125
>gi|161528181|ref|YP_001582007.1| signal-transduction protein [Nitrosopumilus maritimus SCM1]
gi|160339482|gb|ABX12569.1| putative signal-transduction protein with CBS domains
[Nitrosopumilus maritimus SCM1]
Length = 165
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L + +T+E+ K M + N+G ++V+ ++ GI TERD++ KIV + ++P +T++
Sbjct: 35 LTVKVSETLEEVAKKMKEENVGCVIVV---DKIATLGIVTERDFVTKIVAERKTP-HTKI 90
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
E+M+ + LIT+ S++ I A ++M +K I +PVI D IVG+I+ D+VR
Sbjct: 91 FEVMS--SPLITIKSESTIWEAAEIMKEKSIHKLPVIEDEEIVGIITTTDIVR 141
>gi|149185248|ref|ZP_01863565.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
gi|148831359|gb|EDL49793.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
Length = 177
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA+ +A IG+L V+ E+ +AGIF+ERD + ++ +G + R+ E+MT
Sbjct: 55 DQPVSDAITLLASKRIGALPVM---EEGRVAGIFSERDVIYRLAHEGETCLSRRIGEVMT 111
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKR 198
+ IT+ + A+ LMT + IRH+PVIDG + G ISI D+V++ +++ + E
Sbjct: 112 --SPAITVERSMLVDQALALMTRRRIRHLPVIDGEAMCGFISIGDLVKSRMDEVQHEADA 169
Query: 199 LNEFI 203
+ ++I
Sbjct: 170 MRDYI 174
>gi|194289349|ref|YP_002005256.1| hypothetical protein RALTA_A1226 [Cupriavidus taiwanensis LMG
19424]
gi|193223184|emb|CAQ69189.1| conserved hypothetical protein, CBS (cystathionine-beta-synthase)
domains [Cupriavidus taiwanensis LMG 19424]
Length = 148
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D ++ AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILQIKGN----TLYTVTPDTSLLVAVHTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + + + + ++M D T+ +D N ++M ++H R++PV+D R +
Sbjct: 54 EIIETLARNNGNVGTSSIRKVMDDAPLTCTMETDVN--EVRRMMLERHTRYLPVLDNRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVEDQSFENKMLKAYIR 140
>gi|350545538|ref|ZP_08915014.1| Inosine-5'-monophosphate dehydrogenase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350526700|emb|CCD39831.1| Inosine-5'-monophosphate dehydrogenase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 142
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 6/136 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K + D + DAV+ MA H+IGSLVV++ G+ + G+ T R+ + + G S
Sbjct: 2 KGNTLFTVTPDTPLADAVETMAAHDIGSLVVMEYGD---LVGMLTFREIILTLRDNGGSV 58
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAV 188
T + +IM D T +D N ++M + H+R++PV++ R ++G+IS DV +AV
Sbjct: 59 GRTTIRKIMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVMEKRQLMGVISFYDVAKAV 116
Query: 189 VEQQKGELKRLNEFIR 204
VE+Q E + L +IR
Sbjct: 117 VEEQGFENRMLKAYIR 132
>gi|385681865|ref|ZP_10055793.1| signal transduction protein [Amycolatopsis sp. ATCC 39116]
Length = 138
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C R+ DTV DA K MA+ +G++ + GE + G+ T+RD + K++ +G+ P+
Sbjct: 14 CVRTSDTVLDAAKRMAELQVGAMPIC--GEDNRLKGMLTDRDIVVKVLAEGKDPRAVNAG 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKG 194
E+ + + +T+ +D + ++ M +R +PVIDG +VG+++ DV R++ E + G
Sbjct: 72 ELA--QGEAVTIGADDDAKEILRTMAQHQVRRLPVIDGHDLVGIVAQADVARSLDEPEIG 129
Query: 195 EL 196
+L
Sbjct: 130 DL 131
>gi|113867333|ref|YP_725822.1| hypothetical protein H16_A1314 [Ralstonia eutropha H16]
gi|113526109|emb|CAJ92454.1| conserved hypothetical protein with CBS domain [Ralstonia eutropha
H16]
Length = 148
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D ++ AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILQIKGN----TLYTVTPDTSLLVAVHTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + + T + ++M D T+ +D N ++M ++H R++PV+D R +
Sbjct: 54 EIIETLARNHGNVGGTSIRKVMDDAPLTCTMETDVN--EVRRMMLERHTRYLPVLDNRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVEDQSFENKMLKAYIR 140
>gi|326386343|ref|ZP_08207966.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326209004|gb|EGD59798.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 121
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
DAV+ +A+ IG+L V G + +AGIF+ERD L + G +V ++MT +
Sbjct: 3 DAVELLAERRIGALPVEDVGAE--VAGIFSERDVLYSLQTNGADILRRKVRDVMT--TPV 58
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
IT D ++L A+ LMT + IRH+PV+ DGR++ ISI D+V+ +E+ + E + +I
Sbjct: 59 ITASPDQSVLEALALMTQRRIRHLPVMEDGRMIAFISIGDLVKYRIERIEAEADAMRHYI 118
Query: 204 RG 205
+
Sbjct: 119 QS 120
>gi|393757695|ref|ZP_10346519.1| hypothetical protein QWA_01220 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165387|gb|EJC65436.1| hypothetical protein QWA_01220 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 153
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + + TVE AV++M++ +IGSLV+++ G+ + G+ T R
Sbjct: 2 LKVSEILRVKGD----TLYTGTPEMTVEKAVQSMSELDIGSLVIMEHGQ---LVGMLTFR 54
Query: 117 DYLRKIVGQG-RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI 175
+ +R G ++P +T V IM D +T + A+ +LM + H R++PV+DG +
Sbjct: 55 EIIRHWHAHGNKAPGFT-VRSIMDDAPVSVTPNTSAD--EVQRLMLNNHARYMPVMDGPV 111
Query: 176 V-GMISIVDVVRAVVEQQKGELKRLNEFIR 204
+ G+IS D+ RA+V Q+ E L +IR
Sbjct: 112 LMGVISFFDMARAIVHAQQFENNMLKAYIR 141
>gi|398339550|ref|ZP_10524253.1| putative signal transduction protein containing CBS domains
[Leptospira kirschneri serovar Bim str. 1051]
gi|410939566|ref|ZP_11371393.1| CBS domain protein [Leptospira noguchii str. 2006001870]
gi|418677924|ref|ZP_13239198.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418687604|ref|ZP_13248763.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418742000|ref|ZP_13298373.1| CBS domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421088797|ref|ZP_15549618.1| CBS domain protein [Leptospira kirschneri str. 200802841]
gi|421132009|ref|ZP_15592183.1| CBS domain protein [Leptospira kirschneri str. 2008720114]
gi|400321114|gb|EJO68974.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410002778|gb|EKO53294.1| CBS domain protein [Leptospira kirschneri str. 200802841]
gi|410356561|gb|EKP03878.1| CBS domain protein [Leptospira kirschneri str. 2008720114]
gi|410737928|gb|EKQ82667.1| CBS domain protein [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410750358|gb|EKR07338.1| CBS domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410785434|gb|EKR74398.1| CBS domain protein [Leptospira noguchii str. 2006001870]
Length = 146
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D KV L + V DAVK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKV---LSVEPETLVMDAVKFMTKYDIGSVIILGEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI-VGMISI 181
G V+E+MT + T+ + ++ + +M K IRH+P+++ I +G+ISI
Sbjct: 60 AELGLDFFKKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDILIGIISI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYSE 142
>gi|407641205|ref|YP_006804964.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
gi|407304089|gb|AFT97989.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
Length = 139
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
W+ D+TV A + MA+ +GSLV+ + + GI T+RD + K + QGRSP
Sbjct: 12 AQWIA--KDETVGKAARVMAELGVGSLVIAD--DNDRMCGIITDRDIVVKCIAQGRSPGT 67
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVE 190
TR AE+ + + +DA+I + M I+ +PVI D R+VGMIS D+ R + +
Sbjct: 68 TRAAELCESTPRWVA--ADADIEEVLDEMESHRIKRMPVIEDKRLVGMISEADLARHLDD 125
Query: 191 QQKGEL 196
Q GE
Sbjct: 126 NQLGEF 131
>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
alaskensis RB2256]
Length = 141
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 6/135 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
+ GS + + DDTV +AQ+ IG++ V+ + + GIF+ERD +R I G
Sbjct: 10 RTGSVISAQPDDTVRAVADLLAQNRIGAVPVV---DGDAVVGIFSERDIVRLISSYGPEA 66
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
R+ ++MT IT D ++ A+ MT K IRH+PV++ G++VG +SI D+V+
Sbjct: 67 LDRRIDDVMT--KSPITCAPDMAVIVALSQMTQKRIRHLPVVEGGKMVGFVSIGDLVKYR 124
Query: 189 VEQQKGELKRLNEFI 203
+++ + E + ++I
Sbjct: 125 IDRIEAEAAAMRDYI 139
>gi|383822248|ref|ZP_09977476.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
gi|383331808|gb|EID10303.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
Length = 142
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL +KG + +V + +A HNIG++VV+ P +AGI +ERD
Sbjct: 3 IADVLRSKG----SAVATITPQTSVAGLLTELAVHNIGAMVVVSP---DGLAGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R + +G V+EIMT + + T D + LMT+ +RHVPV+D GR+VG
Sbjct: 56 VRALHRRGADLLTCPVSEIMT--SLVATCSPDDTVDSLSALMTNNRVRHVPVMDNGRLVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + + ++L +I
Sbjct: 114 IVSIGDVVKTRMEELEAQQEQLQAYI 139
>gi|399065218|ref|ZP_10747815.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
gi|398029892|gb|EJL23337.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Novosphingobium sp. AP12]
Length = 141
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
G + C TV DAV ++ IG++ V++ GE IAGIF+ERD + ++ G
Sbjct: 11 GDVVTCDVSTTVRDAVGILSDRRIGAVPVMEDGE---IAGIFSERDVIYRLREMGAEVLD 67
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVE 190
+ IMT +T+ D ++ A+ LMT + IRH+PV+ DGR+V +SI D+V+ ++
Sbjct: 68 MPLGHIMTASP--VTVDPDTAVIAALSLMTRRRIRHLPVVADGRMVAFVSIGDLVKYRID 125
Query: 191 QQKGELKRLNEFIR 204
+ + E + ++I+
Sbjct: 126 KIESEAAAMRDYIQ 139
>gi|381199255|ref|ZP_09906405.1| hypothetical protein SyanX_02209 [Sphingobium yanoikuyae XLDN2-5]
gi|427409344|ref|ZP_18899546.1| hypothetical protein HMPREF9718_02020 [Sphingobium yanoikuyae ATCC
51230]
gi|425711477|gb|EKU74492.1| hypothetical protein HMPREF9718_02020 [Sphingobium yanoikuyae ATCC
51230]
Length = 142
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L KG D V +S D+V V +A IG + V+ G+ + GIF+ER
Sbjct: 1 MTIAAILQGKGRDVVQ----VQSTDSVLSVVTLLADRRIGCVPVVDGGQ---VVGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
D + ++ QG VA++MT IT+ ++HA+ LMT + IRH+PV+ G +
Sbjct: 54 DVVYRLAQQGAEALNHTVADVMT--RPAITIDDQMPVIHALSLMTKRRIRHLPVVKGSDL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++SI D+V+ ++ + E L ++I+
Sbjct: 112 IGLVSIGDLVKFRIDNIESEAAALRDYIQ 140
>gi|421748217|ref|ZP_16185845.1| hypothetical protein B551_16151 [Cupriavidus necator HPC(L)]
gi|409773089|gb|EKN54950.1| hypothetical protein B551_16151 [Cupriavidus necator HPC(L)]
Length = 148
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + D ++ +AV MA+ +IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSDILQIKGN----TLYTVKPDTSLLEAVTTMAERDIGSLVVMEYGE---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ + + + +M D T +D N ++M ++H R++PV+D R +
Sbjct: 54 EIIQTLASNNGNVGNATIRRVMDDAPLTCTPETDVN--EVRRMMLERHARYMPVLDSRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQSFENRMLKAYIR 140
>gi|62290164|ref|YP_221957.1| hypothetical protein BruAb1_1258 [Brucella abortus bv. 1 str.
9-941]
gi|82700086|ref|YP_414660.1| hypothetical protein BAB1_1274 [Brucella melitensis biovar Abortus
2308]
gi|148559815|ref|YP_001259171.1| CBS domain-containing protein [Brucella ovis ATCC 25840]
gi|189024399|ref|YP_001935167.1| hypothetical protein BAbS19_I11880 [Brucella abortus S19]
gi|256263764|ref|ZP_05466296.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|260546708|ref|ZP_05822447.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260754992|ref|ZP_05867340.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260758208|ref|ZP_05870556.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762035|ref|ZP_05874378.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884002|ref|ZP_05895616.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|261214246|ref|ZP_05928527.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|261219598|ref|ZP_05933879.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261222410|ref|ZP_05936691.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|261314029|ref|ZP_05953226.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261317884|ref|ZP_05957081.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322093|ref|ZP_05961290.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261325335|ref|ZP_05964532.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261752559|ref|ZP_05996268.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261758440|ref|ZP_06002149.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|265984308|ref|ZP_06097043.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|265988912|ref|ZP_06101469.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|265995163|ref|ZP_06107720.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998377|ref|ZP_06110934.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|294852589|ref|ZP_06793262.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306839078|ref|ZP_07471895.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|306840280|ref|ZP_07473054.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306844158|ref|ZP_07476751.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|376273017|ref|YP_005151595.1| hypothetical protein BAA13334_I01978 [Brucella abortus A13334]
gi|384211622|ref|YP_005600704.1| hypothetical protein [Brucella melitensis M5-90]
gi|384408728|ref|YP_005597349.1| CBS domain protein [Brucella melitensis M28]
gi|384445304|ref|YP_005604023.1| hypothetical protein [Brucella melitensis NI]
gi|423166654|ref|ZP_17153357.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|423170972|ref|ZP_17157647.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|423172946|ref|ZP_17159617.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|423178361|ref|ZP_17165005.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|423180402|ref|ZP_17167043.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|423183534|ref|ZP_17170171.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|423185526|ref|ZP_17172140.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
gi|423188661|ref|ZP_17175271.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|62196296|gb|AAX74596.1| CBS domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82616187|emb|CAJ11230.1| CBS domain [Brucella melitensis biovar Abortus 2308]
gi|148371072|gb|ABQ61051.1| CBS domain protein [Brucella ovis ATCC 25840]
gi|189019971|gb|ACD72693.1| CBS domain protein [Brucella abortus S19]
gi|260095758|gb|EEW79635.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260668526|gb|EEX55466.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260672467|gb|EEX59288.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675100|gb|EEX61921.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260873530|gb|EEX80599.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260915853|gb|EEX82714.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260920994|gb|EEX87647.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|260924687|gb|EEX91255.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261294783|gb|EEX98279.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261297107|gb|EEY00604.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261301315|gb|EEY04812.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261303055|gb|EEY06552.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261738424|gb|EEY26420.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|261742312|gb|EEY30238.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|262552845|gb|EEZ08835.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|262766276|gb|EEZ12065.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263093864|gb|EEZ17826.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|264661109|gb|EEZ31370.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|264662900|gb|EEZ33161.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|294821178|gb|EFG38177.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306275433|gb|EFM57170.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|306289807|gb|EFM60989.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306405625|gb|EFM61887.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|326409275|gb|ADZ66340.1| CBS domain protein [Brucella melitensis M28]
gi|326538985|gb|ADZ87200.1| CBS domain containing protein [Brucella melitensis M5-90]
gi|349743295|gb|AEQ08838.1| CBS domain protein [Brucella melitensis NI]
gi|363400623|gb|AEW17593.1| CBS domain containing protein [Brucella abortus A13334]
gi|374538306|gb|EHR09814.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|374544138|gb|EHR15616.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|374544465|gb|EHR15942.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|374545142|gb|EHR16605.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|374547933|gb|EHR19385.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|374548362|gb|EHR19810.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|374559223|gb|EHR30612.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|374560236|gb|EHR31619.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
Length = 143
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG D V S DT+ AV + +H IG+LVV E HI GI +ER
Sbjct: 1 MTVRSILETKGRDVV----VIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R + Q VAE+MT +K+ I M++MT RH+PV + G++
Sbjct: 55 DVVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTRSRFRHMPVEEGGKL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI DVV+ +E + E + + +I
Sbjct: 113 VGIISIGDVVKRRIEDVEREAEDIRTYI 140
>gi|383781302|ref|YP_005465869.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
gi|381374535|dbj|BAL91353.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
Length = 137
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C +T+ DA + M++ N+GSL + GE + G+ T+RD + K + QGR+ R +
Sbjct: 14 CVGEKETLADAARKMSELNVGSLPIC--GEDNRLHGMLTDRDIVIKALAQGRNAADVRAS 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKG 194
E+ + K IT+ +D + ++ M+ +R +PVIDG ++VG++++ DV RA+ ++ G
Sbjct: 72 ELA--QGKPITVGADDDAAEILRTMSQHKVRRLPVIDGHQLVGIVAVADVARALPDRPVG 129
Query: 195 EL 196
+L
Sbjct: 130 DL 131
>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
gi|15623234|dbj|BAB67223.1| hypothetical protein STK_21190 [Sulfolobus tokodaii str. 7]
Length = 164
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ +D+V+ A + M +HN+G+LVV+ + I GI TERD + K+V +G+ +V +
Sbjct: 17 KENDSVKTAAEEMKKHNLGALVVID--DNDKIVGIITERDIV-KVVAEGKLD--AKVKDY 71
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGE 195
MT +I + D I A+++M D RH+P+I DG+++G++SI D+ +A+++ +
Sbjct: 72 MT--RNVIGVTEDTPITDALEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSKAILDPHFFQ 129
Query: 196 LKRLNEFIRGEYY 208
K+ ++G Y
Sbjct: 130 FKKEAADVKGSGY 142
>gi|357021739|ref|ZP_09083970.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356479487|gb|EHI12624.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 132
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
MA HN+G++VV++P IAG+ +ERD +RK+ +G + V+EIMT + ++T
Sbjct: 17 MATHNVGAMVVVRPDGSGGIAGMVSERDVVRKLHQRGANLLDQPVSEIMT--SLVVTCSP 74
Query: 150 DANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVR 186
D + +MTD +RHVPV +DGR+ G++SI DVV+
Sbjct: 75 DDAVDDLAAMMTDNRVRHVPVLVDGRLAGIVSIGDVVK 112
>gi|354614451|ref|ZP_09032314.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
gi|353221195|gb|EHB85570.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
Length = 149
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Query: 72 GSWLCCRSDDT-VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
GS + + DT V+ V +A+HN+G+LVV+ P + + GI +ERD +R + +G
Sbjct: 11 GSTVATVTPDTGVDGLVARLAEHNVGALVVVGPAGE--VIGIVSERDVVRGLRERGTDLL 68
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRAVV 189
TRV +IMT + T + L A +MT + IRHVPV +DG + G++SI DVV++ +
Sbjct: 69 ATRVGDIMTTDVAGCTPEDSVDELSA--VMTRRRIRHVPVLVDGVLAGIVSIGDVVKSRM 126
Query: 190 EQQKGELKRLNEFIRGEYY 208
++ + + ++L +I G +
Sbjct: 127 DELEQDREQLESYIVGGRF 145
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG--QGRSPKYT 132
+ R D TV +A K M ++NIGS+V+++ GE + GI TERD + + + GR P+
Sbjct: 27 ITMRPDGTVYEAAKLMKENNIGSVVIMEEGE---LRGIVTERDLITRYIAAEDGRRPEDV 83
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRA 187
+V+EIMT + IT+ + +I A ++M +K+IR + V+ DGR+VG+IS D+++
Sbjct: 84 KVSEIMTKDP--ITIRDNTDIDEAARIMIEKNIRRLIVVNYDGRVVGIISSRDILKV 138
>gi|94310080|ref|YP_583290.1| hypothetical protein Rmet_1135 [Cupriavidus metallidurans CH34]
gi|93353932|gb|ABF08021.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 151
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + AV+ MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILQLKGN----TLFTVTPDTPLMQAVQAMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + + + ++M D T +D N + M L ++H R++PV+D R +
Sbjct: 54 EIIETMAANNGTLGTHSIRKVMDDAPLTCTPETDVNEVRRMML--ERHTRYLPVLDNRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV ++VVE+Q E K L +IR
Sbjct: 112 MGVISFYDVAKSVVEEQSFENKMLKAYIR 140
>gi|386841418|ref|YP_006246476.1| signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374101719|gb|AEY90603.1| putative signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451794713|gb|AGF64762.1| putative signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 139
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 80/140 (57%), Gaps = 11/140 (7%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+ A LMTKG + C +++TV DA + M + +G+L + G + G+ T+RD
Sbjct: 3 TTARDLMTKGAE------CVAAEETVLDAARKMTELGVGALPIC--GADDRLKGVLTDRD 54
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
+ ++G G+ P + ++ + + +T+ +D ++ ++ M +R +PVIDG R+V
Sbjct: 55 IVVGVLGAGKDPAAVKAGDLA--QGEAVTIGADDDVDELLRTMASHKVRRLPVIDGHRLV 112
Query: 177 GMISIVDVVRAVVEQQKGEL 196
G++++ DV RA+ ++ G+L
Sbjct: 113 GIVALADVARALPDRAVGDL 132
>gi|445496875|ref|ZP_21463730.1| hypothetical protein Jab_2c04660 [Janthinobacterium sp. HH01]
gi|444786870|gb|ELX08418.1| hypothetical protein Jab_2c04660 [Janthinobacterium sp. HH01]
Length = 151
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG D + DA MA+ +IGSLVV++ G+ +AG+ T R
Sbjct: 1 MKVSEILQVKG----SILYTISPDQPLADAANTMAEKDIGSLVVMEFGD---LAGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ LR + G + V + M D IT+ D + ++M +KH R++PV++ + I
Sbjct: 54 EVLRALHENGGTVGAGTVRKHMDDHP--ITVTPDTEVNEVRRIMLEKHARYLPVMNAKTI 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV RAV+E Q E + L +IR
Sbjct: 112 LGVISFYDVARAVLEAQSFENRMLKAYIR 140
>gi|398810730|ref|ZP_10569541.1| CBS domain-containing protein [Variovorax sp. CF313]
gi|398082169|gb|EJL72928.1| CBS domain-containing protein [Variovorax sp. CF313]
Length = 150
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + DD + +A MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLFTITPDDLLAEAANTMAEKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + +V G T V + M D TL +D + + ++M ++H R++PV+D R +
Sbjct: 54 EVIVAVVKNGGQIGTTLVRKAMDDAPVTCTLETDLDEIR--RIMLERHARYMPVMDKRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|430809537|ref|ZP_19436652.1| hypothetical protein D769_24763 [Cupriavidus sp. HMR-1]
gi|429498051|gb|EKZ96567.1| hypothetical protein D769_24763 [Cupriavidus sp. HMR-1]
Length = 151
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + AV+ MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILQLKGN----TLFTVTPDTPLMQAVQAMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + + + ++M D T +D N + M L ++H R++PV+D R +
Sbjct: 54 EIIETMAANNGTLGTHSIRKLMDDAPLTCTPETDVNEVRRMML--ERHTRYLPVLDNRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV ++VVE+Q E K L +IR
Sbjct: 112 MGVISFYDVAKSVVEEQSFENKMLKAYIR 140
>gi|379735358|ref|YP_005328864.1| putative CBS,Cystathionine beta-synthase [Blastococcus saxobsidens
DD2]
gi|378783165|emb|CCG02833.1| putative CBS,Cystathionine beta-synthase [Blastococcus saxobsidens
DD2]
Length = 143
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
CC + TV +A + MA ++ G L V+ E +H+ G+ T+RD + V QG+ P+ T VA
Sbjct: 13 CCSPETTVREAAELMADNDCGCLPVVD--EDRHVVGVVTDRDITCRCVAQGKDPE-TPVA 69
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQK 193
E+MT + D ++ ++++D IR VPV+D G VGM++ D+ R +QQ
Sbjct: 70 EVMTSQASCCG--PDDDVDEVARILSDSKIRRVPVVDAGGCCVGMVAQADLAR-TDQQQA 126
Query: 194 GEL 196
G++
Sbjct: 127 GDV 129
>gi|390571435|ref|ZP_10251676.1| CBS domain-containing protein [Burkholderia terrae BS001]
gi|420248667|ref|ZP_14751984.1| CBS domain-containing protein [Burkholderia sp. BT03]
gi|389936538|gb|EIM98425.1| CBS domain-containing protein [Burkholderia terrae BS001]
gi|398067357|gb|EJL58875.1| CBS domain-containing protein [Burkholderia sp. BT03]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKLKGN----TLFTVTPDSPLNEAVNTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + + G S + + ++M D T +D N ++M + H+R++PV++ R +
Sbjct: 54 EIILVLSRNGGSVGGSTIRKVMDDHPLTCTPETDVN--EVRRMMLEHHVRYLPVMESRKL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE+Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEEQGFENRMLKAYIR 140
>gi|74317862|ref|YP_315602.1| hypothetical protein Tbd_1844 [Thiobacillus denitrificans ATCC
25259]
gi|74057357|gb|AAZ97797.1| conserved hypothetical protein containing CBS domain [Thiobacillus
denitrificans ATCC 25259]
Length = 144
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D VE AV M + +GSLVVLK GE + G+ TERD + +V G K T V+ IM
Sbjct: 21 DRVESAVARMVELGVGSLVVLKAGE---MVGLLTERDVVHGMVEHGCDLKDTEVSAIMVT 77
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRL 199
+ + +D ++ +A +MT HI H+P++DG +++ +IS DV RA +++ E L
Sbjct: 78 DP--VVANADDSVDYARDVMTKSHIGHLPILDGNKLLAIISFHDVARACLKEANFENSLL 135
Query: 200 NEFIR 204
+I+
Sbjct: 136 KRYIK 140
>gi|395009060|ref|ZP_10392633.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394312926|gb|EJE50029.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 149
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + +AV MA +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTVTPDEPLANAVDIMADRDIGSLVVMELGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ IV G S +V M D TL ++ + ++M D+H R++PV+D R +
Sbjct: 54 EVIQAIVKNGGSVGTLQVRSAMDDHPLTCTLETEMD--EVRRMMLDRHARYMPVMDKRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|440226719|ref|YP_007333810.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
gi|440038230|gb|AGB71264.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
Length = 144
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 9/151 (5%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
++SV +L KG D V + + TV +A K + ++ IG++VV+ PG + I+GIFTE
Sbjct: 2 SVSVKAILEAKGRDVVTTG----GNTTVAEAAKILNENRIGAIVVVGPGGK--ISGIFTE 55
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RD + + QG+ +A +MT K+ D M+LMT + RHVPV + G+
Sbjct: 56 RDVVNAVAKQGQECLDKPIASMMT--AKVHRCKEDTTTDELMELMTMRRFRHVPVEEKGK 113
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ G+ISI DVV+ + + + E +++ +I G
Sbjct: 114 LSGIISIGDVVKWRIREIELEAEQIKAYIAG 144
>gi|33596534|ref|NP_884177.1| hypothetical protein BPP1916 [Bordetella parapertussis 12822]
gi|33566303|emb|CAE37216.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 157
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDT-VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ V+E+L KGD L S DT V AV+ M++ +IGSLV+++ G +AG+ T
Sbjct: 2 LKVSEILRVKGDT-----LYTASPDTHVSMAVQTMSEQDIGSLVIMESG---MLAGMLTF 53
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R 174
R+ +R I G + T + IM D ++ + A+ +LM +KH R++PV+DG
Sbjct: 54 REIIRHIDQHGGNVGDTTIRAIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS D+ +A+V Q+ E L +IR
Sbjct: 112 LLGVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|111017173|ref|YP_700145.1| IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|384099896|ref|ZP_10000967.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419965476|ref|ZP_14481420.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|424856737|ref|ZP_18280945.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|432350979|ref|ZP_19594303.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|110816703|gb|ABG91987.1| probable IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|356662872|gb|EHI43051.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|383842566|gb|EID81829.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414569104|gb|EKT79853.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|430769666|gb|ELB85697.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 142
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + + V + +A+HN+G+LVV E + GI TERD
Sbjct: 3 IADVLRNKG----PAVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R+I +G RV +IMT + LP+D + + MT++ IRH+PVI DG++VG
Sbjct: 56 VRRIHERGPDILNARVVDIMT-TSVFTCLPTD-TVDSLAETMTERRIRHLPVIVDGQLVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ + + + E +L +I
Sbjct: 114 IVSIGDVVKSRIGELQTERDQLESYI 139
>gi|407279412|ref|ZP_11107882.1| IMP dehydrogenase [Rhodococcus sp. P14]
Length = 142
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 87/146 (59%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG D +VED + +A++N+G+LVV++ G + GI +ERD
Sbjct: 3 IADVLRNKG----PVVATVDPDLSVEDMIGELARNNVGALVVMEGGA---VIGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ G + RV +IM+ LP+D + + MT++ IRH+PV+ DGR+VG
Sbjct: 56 VRRLHQHGPALLDARVRDIMSTTVS-TCLPTD-TVDSLAETMTERRIRHLPVVVDGRMVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ +++ + E +L +I
Sbjct: 114 IVSIGDVVKSRIDELQCERDQLESYI 139
>gi|397729251|ref|ZP_10496038.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
gi|396934858|gb|EJJ01981.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
Length = 142
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + + V + +A+HN+G+LVV E + GI TERD
Sbjct: 3 IADVLRNKG----PAVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R+I +G RV +IMT + LP+D + + MT++ IRH+PVI DG++VG
Sbjct: 56 VRRIHERGPDILNARVVDIMT-TSVFACLPTD-TVDSLAETMTERRIRHLPVIVDGQLVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ + + + E +L +I
Sbjct: 114 IVSIGDVVKSRIGELQTERDQLESYI 139
>gi|260220898|emb|CBA28924.1| hypothetical protein Csp_A09570 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 155
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG G+ +D++ DA + MA+ +IGSLVV+ G + G+ T R
Sbjct: 1 MKVSDILRVKG----GTLYTTTPEDSLADAAQLMAEKDIGSLVVMSHG---LVVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ ++ V G + T V M TL ++ + + M L ++H R++PVID R++
Sbjct: 54 EVIQAAVKNGGTFGSTSVYRAMDPGPLTCTLETEMDEVRRMML--ERHARYMPVIDNRML 111
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV RAVV+ Q E K L +IR
Sbjct: 112 QGVISFYDVARAVVDSQNFENKMLKAYIR 140
>gi|158430766|pdb|2RC3|A Chain A, Crystal Structure Of Cbs Domain, Ne2398
gi|158430767|pdb|2RC3|B Chain B, Crystal Structure Of Cbs Domain, Ne2398
gi|158430768|pdb|2RC3|C Chain C, Crystal Structure Of Cbs Domain, Ne2398
gi|158430769|pdb|2RC3|D Chain D, Crystal Structure Of Cbs Domain, Ne2398
Length = 135
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
DD+V +A++ MA NIG+L+V+K + + GI TERD+ RK + K T+V EIMT
Sbjct: 25 DDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMT 81
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQK 193
+ + L + M L+T+ +RH+PV+ DG+++G++SI D+V+ + Q +
Sbjct: 82 RQVAYVDLNNTNE--DCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAISQHQ 134
>gi|452955368|gb|EME60766.1| signal transduction protein [Amycolatopsis decaplanina DSM 44594]
Length = 138
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++T D + C + +TV DA K MA ++G++ + GE + G+ T+RD + K+
Sbjct: 1 MVTARDIMTANATCVSASETVLDAAKKMAAESVGAVPIC--GEDGKLKGMLTDRDIVVKV 58
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISI 181
+ +G+ P+ +E+ + + +T+ +D + M+ M + +R +PVIDG ++VG+++
Sbjct: 59 LAEGKDPRALHASELA--QGEAVTIGADDDAEEIMRTMANHKVRRLPVIDGHKLVGIVAQ 116
Query: 182 VDVVRAVVEQQKGEL 196
DV +A+ GEL
Sbjct: 117 ADVAKALPNPDSGEL 131
>gi|33592225|ref|NP_879869.1| hypothetical protein BP1087 [Bordetella pertussis Tohama I]
gi|33601087|ref|NP_888647.1| hypothetical protein BB2104 [Bordetella bronchiseptica RB50]
gi|384203528|ref|YP_005589267.1| hypothetical protein BPTD_1079 [Bordetella pertussis CS]
gi|408416155|ref|YP_006626862.1| hypothetical protein BN118_2303 [Bordetella pertussis 18323]
gi|410420714|ref|YP_006901163.1| hypothetical protein BN115_2932 [Bordetella bronchiseptica MO149]
gi|412338730|ref|YP_006967485.1| hypothetical protein BN112_1413 [Bordetella bronchiseptica 253]
gi|427815209|ref|ZP_18982273.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427819483|ref|ZP_18986546.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427825046|ref|ZP_18992108.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33571870|emb|CAE41385.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33575522|emb|CAE32600.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332381642|gb|AEE66489.1| hypothetical protein BPTD_1079 [Bordetella pertussis CS]
gi|401778325|emb|CCJ63728.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408448009|emb|CCJ59688.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408768564|emb|CCJ53330.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410566209|emb|CCN23769.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410570483|emb|CCN18665.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410590311|emb|CCN05395.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 152
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDT-VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
+ V+E+L KGD L S DT V AV+ M++ +IGSLV+++ G +AG+ T
Sbjct: 2 LKVSEILRVKGDT-----LYTASPDTHVSVAVQTMSEQDIGSLVIMESG---MLAGMLTF 53
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R 174
R+ +R I G + T + IM D ++ + A+ +LM +KH R++PV+DG
Sbjct: 54 REIIRHIDQHGGNVGDTTIRAIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS D+ +A+V Q+ E L +IR
Sbjct: 112 LLGVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|114320376|ref|YP_742059.1| signal-transduction protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226770|gb|ABI56569.1| putative signal-transduction protein with CBS domains
[Alkalilimnicola ehrlichii MLHE-1]
Length = 145
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 6/136 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK + +D V +A+K MA ++G ++V++ G + GIFTERD + ++V G+
Sbjct: 11 DKGVALYSVDADVPVAEAIKTMADGHVGCVLVMEKGS---LRGIFTERDVMIRVVHDGKD 67
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRA 187
P T V+E+MT E ++ P + AM + ++ +RH+PV DG + G++S D++R
Sbjct: 68 PAQTPVSEVMTREVAVV--PPTMTVEEAMVVCLERRVRHLPVYDGSDLEGVVSSGDLMRW 125
Query: 188 VVEQQKGELKRLNEFI 203
V+ QK + L ++I
Sbjct: 126 VIGDQKHMIDDLIQYI 141
>gi|433603543|ref|YP_007035912.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
gi|407881396|emb|CCH29039.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
Length = 142
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + R+D +V + V +A+HN+G++VV+ IAGI +ERD
Sbjct: 3 IADVLRNKG----SAVATVRADASVAELVAALAEHNVGAMVVVA---DSGIAGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ +G VA+IMT E + T ++ LMT+ IRHVPV+ DG +VG
Sbjct: 56 VRRLHDRGADLLAAAVADIMTAE--VFTCSPKDSVDSLTVLMTEHRIRHVPVVADGDLVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ + Q + +L +I
Sbjct: 114 IVSIGDVVKSRISQLEEGQDQLTAYI 139
>gi|82701472|ref|YP_411038.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
gi|82409537|gb|ABB73646.1| putative signal-transduction protein with CBS domains [Nitrosospira
multiformis ATCC 25196]
Length = 147
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D +V +A+ MA NIG+L+VL G+ + GIFTERDY RK R K +V E+MT
Sbjct: 21 DKSVYEAMHLMAAKNIGALLVLHRGK---LVGIFTERDYSRKAYSLDRLAKDIQVKELMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ ++ D + M L+T RH+PV+ +G+++G+ISI D+V+ + ++ + +
Sbjct: 78 AQVAYVS--PDYSTEDCMALVTKTRARHLPVLANGKVMGIISIGDLVKDAISGREFIIDQ 135
Query: 199 LNEFIRG 205
L +I G
Sbjct: 136 LERYIYG 142
>gi|407938502|ref|YP_006854143.1| hypothetical protein C380_09015 [Acidovorax sp. KKS102]
gi|407896296|gb|AFU45505.1| CBS domain-containing protein [Acidovorax sp. KKS102]
Length = 149
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTASPDEPLAGAVSLMAERDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ +V G S V M D TL +D + ++M D+H R++PV+D R +
Sbjct: 54 EVIQALVKNGGSVGTMLVRTAMDDAPLTCTLETDMD--EVRRMMLDRHARYMPVMDRRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|187478769|ref|YP_786793.1| hypothetical protein BAV2279 [Bordetella avium 197N]
gi|115423355|emb|CAJ49889.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 151
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V A++ M++ +IGSLV+++ G +AG+ T R
Sbjct: 2 LKVSEILRVKGD----TLYTATPDTLVSVAIRTMSEQDIGSLVIMESG---MLAGMLTFR 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + G + + IM D ++ + A+ +LM DKH R++PV+DG +
Sbjct: 55 EIMRHLEQTGGQVGESTIRAIMDDAPVSVSPNTSAD--EVQRLMLDKHARYIPVMDGPTL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 113 MGVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|226359682|ref|YP_002777460.1| hypothetical protein ROP_02680 [Rhodococcus opacus B4]
gi|226238167|dbj|BAH48515.1| hypothetical protein [Rhodococcus opacus B4]
Length = 142
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++VL KG + + + +V + +A+HN+G+LVV E + GI TERD
Sbjct: 3 ISDVLRNKG----PAVVTVDPEMSVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R+I +G RV +IMT + LP+D + + MT++ IRH+PVI DG++VG
Sbjct: 56 VRRIHERGPDILNARVVDIMT-TSVFACLPTD-TVDSLAETMTERRIRHLPVIVDGQLVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ + + + E +L +I
Sbjct: 114 IVSIGDVVKSRIGELQTERDQLESYI 139
>gi|254380667|ref|ZP_04996033.1| CBS domain containing protein [Streptomyces sp. Mg1]
gi|194339578|gb|EDX20544.1| CBS domain containing protein [Streptomyces sp. Mg1]
Length = 139
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C R ++T+ DA + M++ +G+L + P ++ H GI T+RD + K + +G+ P +
Sbjct: 14 CVREEETLMDAARRMSELGVGALPICGPDDRLH--GIITDRDIVIKCLAKGKDPHHMTAG 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKG 194
M E K +T+ + A+ +Q+M + +R +PVI D R+VGMIS D+ R + E Q G
Sbjct: 72 --MLAEGKPLTVAAGADSGQVLQIMQEHRVRRLPVIEDHRLVGMISEADLARHLSEDQVG 129
Query: 195 EL 196
Sbjct: 130 HF 131
>gi|374315236|ref|YP_005061664.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359350880|gb|AEV28654.1| CBS-domain-containing membrane protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 147
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
D K + DDT+ A+ + +H IG+L+VL E+ I GI +ERD ++ +
Sbjct: 9 DQKGSKVFSIKPDDTLSHALLQLTEHKIGALLVL--DERGAIKGILSERDIVKHFSRKTE 66
Query: 128 --SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDV 184
+ +++E+MT + + ++ +QLMT RH+PV+ D ++VGMISI DV
Sbjct: 67 HLNTAAIKISEVMT--KGVTYVKPHQSLEDCLQLMTAGRFRHLPVMEDDKVVGMISIGDV 124
Query: 185 VRAVVEQQKGELKRLNEFIRGEY 207
V+A +E++ ++ +L FI Y
Sbjct: 125 VKAALEERDFQIDQLEHFITNPY 147
>gi|296532694|ref|ZP_06895384.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266977|gb|EFH12912.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
Length = 145
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L KG G + D + +AQH IG+++V G + GI +ER
Sbjct: 1 MTIARILQGKG----GQVVSVAPLDDAAAIARTLAQHRIGAVLVRDAGGA--VLGIVSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGR 174
D R + + R ++MT L T+ +I A+ LMTD+ +RH+PV+ DG
Sbjct: 55 DIARALAAHEEATARLRAEQLMT--RVLHTITPATSIADALALMTDRRVRHLPVLARDGS 112
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ GM+SI D+V+ + + + E ++L +F+
Sbjct: 113 LAGMVSIGDLVKQRIAEAEQEAQQLRDFV 141
>gi|374293104|ref|YP_005040139.1| hypothetical protein AZOLI_2737 [Azospirillum lipoferum 4B]
gi|357425043|emb|CBS87924.1| conserved protein of unknown function; CBS domain [Azospirillum
lipoferum 4B]
Length = 160
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K + D +V K MA NIG+++V+ G + GI TERD K++ + P
Sbjct: 35 KAQELILVPEDTSVATVSKMMADKNIGAVLVVDHGA---LIGIVTERDLNNKVLSKDLDP 91
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAV 188
V +MT +LP DA+ + A++LM DKH RH+P+ G R VG++SI D+ +
Sbjct: 92 SAVEVGAVMTRNPD--SLPPDADAVDALKLMHDKHYRHLPITQGKRAVGIVSIRDLFKVA 149
Query: 189 VEQQKGE 195
E E
Sbjct: 150 YEHMMAE 156
>gi|333922072|ref|YP_004495653.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484293|gb|AEF42853.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
Length = 143
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV + + +A+HN+G+LVV++ G + GI +ERD +RK+ G + V+ IMT
Sbjct: 22 TVAELIAALAEHNVGALVVVEDG---RVIGIVSERDVVRKLHRSGAAVLKAPVSAIMT-T 77
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+ + +P+D ++ ++MT++ +RH+PV+ DGR+ G++SI DVV++ + + + + ++L
Sbjct: 78 DVVSCVPTD-HVDSLAEIMTERRVRHMPVVVDGRLTGIVSIGDVVKSRISELESDREQLE 136
Query: 201 EFIRG 205
+I G
Sbjct: 137 TYIAG 141
>gi|296109539|ref|YP_003616488.1| signal transduction protein with CBS domains [methanocaldococcus
infernus ME]
gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
[Methanocaldococcus infernus ME]
Length = 184
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
DTV DA M + +IG++VV+ E + GI TERD L+K+V + PK V E+MT
Sbjct: 24 DTVYDAANIMCEKDIGAVVVV---ENKKPVGILTERDILKKVVAKNLKPKEVLVEEVMT- 79
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRA 187
+IT+P + + A ++M+ +++ +PV+ + +VG+I+ D+VR
Sbjct: 80 -KNIITIPKNTTLTEAAKIMSKHNVKRLPVVENNEVVGIITQDDIVRV 126
>gi|238027743|ref|YP_002911974.1| XRE family transcriptional regulator [Burkholderia glumae BGR1]
gi|237876937|gb|ACR29270.1| Putative transcriptional regulator, XRE family [Burkholderia glumae
BGR1]
Length = 156
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + GI T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTPLREAVDAMAEHDIGSLVVMEYGD---LVGILTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + ++ G + +V ++M DE T +D N ++M ++H R++PV+D R++
Sbjct: 54 EIILRLKANGGAIGDVQVRKVM-DEPLTCTPETDVN--EVRRMMLERHARYMPVLDKRVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|144900070|emb|CAM76934.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 147
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ +A + +A H IG+++ + IAGI +ERD +R + + +VA++MT
Sbjct: 24 SIAEAARLLASHRIGAVIAVTA--NNAIAGILSERDIVRGLAQSDAACTSAKVADLMTAN 81
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKGELKRL 199
+ T D ++ M+ MTD+ IRH+PV+D GR+ GM++I DVV++ +++ E+ L
Sbjct: 82 VQ--TCHEDDSVALLMKTMTDRRIRHLPVVDGGGRLTGMVTIGDVVKSRLDEMDMEVDNL 139
Query: 200 NEFIRGEY 207
++ +
Sbjct: 140 RNYVSASH 147
>gi|408828402|ref|ZP_11213292.1| signal-transduction protein with CBS domain [Streptomyces
somaliensis DSM 40738]
Length = 131
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C D+TV +A K M + +G+L + G + G+ T+RD + K++G+G+ P +
Sbjct: 7 CIGEDETVLEAAKKMTELGVGALPIC--GTDNRLKGMLTDRDIVVKVLGKGKDPAECKAG 64
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKG 194
E+ + + +T+ +D + ++ MT+ +R +PVIDG +VGM++ DV RA+ + + G
Sbjct: 65 ELA--QGEAVTIGADDDADEILRTMTEHKVRRLPVIDGHDLVGMVAQADVARALPDPKVG 122
Query: 195 EL 196
+L
Sbjct: 123 DL 124
>gi|307945500|ref|ZP_07660836.1| signal-transduction protein [Roseibium sp. TrichSKD4]
gi|307771373|gb|EFO30598.1| signal-transduction protein [Roseibium sp. TrichSKD4]
Length = 143
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++VA +L TKG D + +S + D +A+H IG++V+ + HI GI +ER
Sbjct: 1 MNVASILSTKGHDVITE----KSTTLLSDICTTLAEHKIGAIVI--ADDAGHIEGIISER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHA-MQLMTDKHIRHVPVID-GR 174
D ++ I G + V+E+MT K + +DA+ ++A M M+ RHVPV D G+
Sbjct: 55 DIVKAIGTSGPTALEKPVSEVMT---KSVVTCTDADSVNAVMAKMSAGRFRHVPVTDDGK 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ G+ISI DVV+ + Q + E +++ +I
Sbjct: 112 VTGVISIGDVVKFKIAQAEMEAEQMRSYI 140
>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
Length = 142
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
DAV+ +A + IG++VV G + IAGI +ERD +R I +G + +IMT +K+
Sbjct: 25 DAVRFLADNKIGAVVVTGAGGK--IAGILSERDIVRAIASRGADALSAPIYDIMT--SKV 80
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
T + M+LMT RH+PV DG+++G+ISI DVVR +E + E + + +I
Sbjct: 81 TTCGESHTVNQVMELMTKGRFRHLPVEADGKLIGIISIGDVVRRRIEDVEREAEEIKAYI 140
>gi|302039066|ref|YP_003799388.1| hypothetical protein NIDE3787 [Candidatus Nitrospira defluvii]
gi|300607130|emb|CBK43463.1| conserved protein of unknown function, contains CBS domain pairs
[Candidatus Nitrospira defluvii]
Length = 284
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVL---KPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
D +V M H+IGS+++ +P IAGI TE D + K++ GR P T +A+
Sbjct: 23 DTSVVTVATRMRTHSIGSVLIECFDRPHNDCRIAGIVTETDLVAKVLAPGRVPSRTSMAD 82
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGE 195
IM+ + LIT+ D ++ A LM +K+IRH+ V +G ++G+IS+ D+VR V+ G
Sbjct: 83 IMS--SPLITIAPDRPMVDASHLMQNKNIRHLVVTEGTDVLGIISMRDLVRHFVDADGGP 140
Query: 196 LKRLNEFIR 204
++ L R
Sbjct: 141 VQALTNVYR 149
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
Query: 62 VLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121
VLM + +GS D+T DA + MA +IG+L V++ E + GI TE D +RK
Sbjct: 153 VLMKTAIETIGS------DETALDAAQRMADKHIGALFVMEADE---LVGIITEGDLVRK 203
Query: 122 IVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMIS 180
++ P+ RV +M + L+ + + I A + M+ K IRH+ V + ++VG++S
Sbjct: 204 LLAYQLDPQTLRVGALM--NSPLLDIDINRTIRDASERMSAKRIRHLAVTEHEKVVGVLS 261
Query: 181 IVDVVRAVVEQQKGE-LKR 198
I D+V+ V + + + LKR
Sbjct: 262 IRDLVKMVAIRDRPDFLKR 280
>gi|170751024|ref|YP_001757284.1| signal-transduction protein [Methylobacterium radiotolerans JCM
2831]
gi|170657546|gb|ACB26601.1| putative signal-transduction protein with CBS domains
[Methylobacterium radiotolerans JCM 2831]
Length = 143
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++VA +L KG S + D T+++ ++ +A IG+LVV + +AGI +ER
Sbjct: 1 MTVARILAEKGS----SVVTVGPDKTLDEVIQILADKRIGALVVAQA--DGTVAGIISER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + G S V+ MT E + T A I M LMTD RHVPV DGR+
Sbjct: 55 DIMRALARHGGSAFDAPVSAHMTAE--VTTCGRSATIEEVMTLMTDGRFRHVPVCEDGRL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
+G++SI DVV + + E + L ++I
Sbjct: 113 IGLVSIGDVVARKIATVEAEHQALRDYI 140
>gi|23011539|ref|ZP_00051869.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++VA +L KG+ S + TV++A+ +A+ IG+LVV G H+ GI +ER
Sbjct: 1 MTVARILAEKGN----SVVTVPPHRTVDEAIHLLAEKQIGALVVADAG--GHVIGILSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + G + ++ MT K++T A+I M+ MT+ RH+PV+ DG +
Sbjct: 55 DVMRALARDGAAALDQSISHYMT--AKVVTCTRRASIEDVMETMTEGRFRHLPVVEDGHL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI DVV+ + + E + + ++I
Sbjct: 113 VGVVSIGDVVKRRIAAVEAEHQAMRDYI 140
>gi|347821420|ref|ZP_08874854.1| XRE family transcriptional regulator [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 150
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + DAV MA+ +IGSLVV++ GE + G+ + R
Sbjct: 1 MQVSDILRVKGN----ALYTAAPDEPLADAVSVMAERDIGSLVVMEQGE---LVGMLSFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + +V G S V M D TL +D + + M M D H R++PV++ +++
Sbjct: 54 EVILAMVKNGGSVTALPVRSAMDDAPLTCTLETDIDAVRRM--MLDHHARYLPVMERKLL 111
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|329901866|ref|ZP_08272953.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
IMCC9480]
gi|327548958|gb|EGF33575.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
IMCC9480]
Length = 161
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGI 112
G + V+E+L KG+ + + +AV MA+ +IGSLVV++ GE + G+
Sbjct: 10 GTRKMKVSEILQVKGN----ILYTVTPETPMLEAVITMAEKDIGSLVVMEFGE---LVGM 62
Query: 113 FTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID 172
+ R+ ++ + G T V + M D IT+ + I +LM ++H R+VPV+D
Sbjct: 63 LSFREVMKTLHENGGEIGKTLVRKHMDDHP--ITVTPETEINEVRRLMLERHARYVPVLD 120
Query: 173 GR-IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+ ++G+IS DV RAVVE Q E K L +IR
Sbjct: 121 AKMLLGVISFYDVARAVVEAQSFENKMLKAYIR 153
>gi|302525541|ref|ZP_07277883.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302434436|gb|EFL06252.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 143
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + TV + + +A+HN+G++VV+ + IAGI +ERD
Sbjct: 3 IADVLQRKG----ATVATVSPGTTVAELLAGLARHNVGAMVVVD--AEGGIAGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+RK+ G + VA+IMT + + D + +MT++ IRHVPV+D GR+ G
Sbjct: 57 VRKLNDHGPAVLEGPVADIMT--TMVASCTPDDPVDRLSVVMTERRIRHVPVLDGGRLAG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +EQ + ++L +I
Sbjct: 115 IVSIGDVVKIRMEQLEQSQEQLEAYI 140
>gi|9188545|dbj|BAA99562.1| inosine-5'-monophosphate dehydrogenase [Chlorella vulgaris]
Length = 182
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ GI TERDYL K+V + +S K V++IMTD++KL+T +++ M+LMT+ + RHV
Sbjct: 7 VVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDKSKLMTATPQQSVVDVMKLMTENNFRHV 66
Query: 169 PVI-DGRIVGMISIVD 183
PV+ +G+ +GM+SI D
Sbjct: 67 PVVHEGKYLGMVSIRD 82
>gi|399992907|ref|YP_006573147.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
gi|400754582|ref|YP_006562950.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
2.10]
gi|398653735|gb|AFO87705.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
2.10]
gi|398657462|gb|AFO91428.1| cystathionine beta-synthase-like protein [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
Length = 144
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ +A K + H IG++VV GE GI +ERD +R++ G +E MT
Sbjct: 23 TISEAAKLLGDHKIGTVVVSSDGETAE--GILSERDIVRELARSGSGCLSKATSEYMT-- 78
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
KL+T S +N+ ++ MT+ RH+PV+ DG+++G++S+ DVV+A + + E L
Sbjct: 79 RKLVTCTSQSNVEDVLKQMTEGRFRHMPVVEDGKLIGLVSLGDVVKAQLAEVAMEKDALE 138
Query: 201 EFIRG 205
I G
Sbjct: 139 GMIMG 143
>gi|402851205|ref|ZP_10899376.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402498575|gb|EJW10316.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V A K + + IG+LVV G + + GI +ERD +R + +G T V+EIMT
Sbjct: 22 SVATATKTLGERGIGALVV--TGTESRVIGIVSERDIVRALGTRGGEVLETPVSEIMT-- 77
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLN 200
K+ T I MQ MT+ RHVPV++ R++G++SI DVV++ +EQ + E L
Sbjct: 78 RKVATCTQHDTIDELMQQMTEGKFRHVPVVEHDRLIGIVSIGDVVKSRLEQMEQESDALR 137
Query: 201 EFIR 204
++IR
Sbjct: 138 DYIR 141
>gi|409402255|ref|ZP_11251845.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
gi|409129115|gb|EKM98982.1| CBS domain-containing protein [Acidocella sp. MX-AZ02]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
+K ++ +D V V +A+ IG+++V++ GE + GI +ERD +R + +
Sbjct: 9 NKPPGFVSVPADLPVSGVVSILAEKVIGAVLVVENGE---LIGILSERDVVRTLATRAAG 65
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRA 187
+MT K+ T + + AM++MT+ H RH+P++ +GR+ G++SI DVV+A
Sbjct: 66 TLSMTAGALMT--RKITTGTPETTVEQAMEMMTNGHFRHLPILENGRLTGLVSIGDVVKA 123
Query: 188 VVEQQKGELKRLNEFIRG 205
++Q + E+ L ++ G
Sbjct: 124 RIDQSQHEVDSLRTYVAG 141
>gi|124266616|ref|YP_001020620.1| hypothetical protein Mpe_A1423 [Methylibium petroleiphilum PM1]
gi|124259391|gb|ABM94385.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 154
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG G+ + +A++ MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKG----GTLFTVTPSQPLAEALRTMAERDIGSLVVMEHGD---VVGLLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ IVG G + T V +M E+ +T D I ++M +H R++PV+ R +
Sbjct: 54 EVIQAIVGNGGNVGDTIVRTVM--EDHPMTCTPDTEIDEVRRMMLGRHARYMPVLTQRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVDGQDFENRMLKAYIR 140
>gi|398825173|ref|ZP_10583477.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398224117|gb|EJN10438.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L KG + D + AVK + + IG+++V+ Q + GI +ER
Sbjct: 1 MTVRSILNAKGH----QIMSVEPDAKLAAAVKLLGEKKIGAVLVMN---QSRLEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R I +G + V+E+MT K++T + M++MT RH+PV+D G++
Sbjct: 54 DIVRVIGARGAAALEEPVSEVMT--RKVVTCKETDTVAELMEMMTTGKFRHLPVLDNGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|417759228|ref|ZP_12407265.1| CBS domain protein [Leptospira interrogans str. 2002000624]
gi|417768808|ref|ZP_12416733.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417777128|ref|ZP_12424953.1| CBS domain protein [Leptospira interrogans str. 2002000621]
gi|418670884|ref|ZP_13232246.1| CBS domain protein [Leptospira interrogans str. 2002000623]
gi|418682010|ref|ZP_13243230.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418691794|ref|ZP_13252878.1| CBS domain protein [Leptospira interrogans str. FPW2026]
gi|418699757|ref|ZP_13260709.1| CBS domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418706322|ref|ZP_13267170.1| CBS domain protein [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418716751|ref|ZP_13276714.1| CBS domain protein [Leptospira interrogans str. UI 08452]
gi|418722826|ref|ZP_13281800.1| CBS domain protein [Leptospira interrogans str. UI 12621]
gi|418731302|ref|ZP_13289708.1| CBS domain protein [Leptospira interrogans str. UI 12758]
gi|421114560|ref|ZP_15574976.1| CBS domain protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421126506|ref|ZP_15586738.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421137455|ref|ZP_15597540.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|400326020|gb|EJO78289.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400358556|gb|EJP14636.1| CBS domain protein [Leptospira interrogans str. FPW2026]
gi|409944703|gb|EKN90283.1| CBS domain protein [Leptospira interrogans str. 2002000624]
gi|409949117|gb|EKN99096.1| CBS domain protein [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409963660|gb|EKO27383.1| CBS domain protein [Leptospira interrogans str. UI 12621]
gi|410013848|gb|EKO71923.1| CBS domain protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410018269|gb|EKO85109.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410436058|gb|EKP85182.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410573005|gb|EKQ36062.1| CBS domain protein [Leptospira interrogans str. 2002000621]
gi|410582313|gb|EKQ50112.1| CBS domain protein [Leptospira interrogans str. 2002000623]
gi|410761254|gb|EKR27440.1| CBS domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410763947|gb|EKR34666.1| CBS domain protein [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410774027|gb|EKR54047.1| CBS domain protein [Leptospira interrogans str. UI 12758]
gi|410787522|gb|EKR81254.1| CBS domain protein [Leptospira interrogans str. UI 08452]
gi|455668703|gb|EMF33896.1| CBS domain protein [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 146
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D KV L + V D VK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRKV---LSVEPETLVMDVVKFMTKYDIGSVIILGEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISI 181
G V+E+MT + T+ + ++ + +M K IRH+P+++ ++G+ISI
Sbjct: 60 AELGLDLFKKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYSE 142
>gi|351728164|ref|ZP_08945855.1| CBS domain-containing protein [Acidovorax radicis N35]
Length = 150
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTASPDEPLAGAVALMAERDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ +V G S V M D TL +D + ++M D+H R++PV+D + +
Sbjct: 54 EVIQAVVKNGGSVGTMLVRTAMDDAPLTCTLETDMD--EVRRMMLDRHARYMPVMDRKML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|17987023|ref|NP_539657.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
str. 16M]
gi|17982676|gb|AAL51921.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
str. 16M]
Length = 157
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 43 SSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLK 102
++++ P + G+ +V +L TKG D V S DT+ AV + +H IG+LVV
Sbjct: 4 AANAKPWRDFGM---TVRSILETKGRDVV----VIASADTLSQAVAMLNKHKIGALVVCD 56
Query: 103 PGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTD 162
E HI GI +E D +R + Q VAE+MT +K+ I M++MT
Sbjct: 57 --EAGHIEGILSECDVVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTR 112
Query: 163 KHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
RH+PV + G++VG+ISI DVV+ +E + E + + +I
Sbjct: 113 SRFRHMPVEEGGKLVGIISIGDVVKRRIEDVEREAEDIRTYI 154
>gi|409437454|ref|ZP_11264568.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
mesoamericanum STM3625]
gi|408750882|emb|CCM75726.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
mesoamericanum STM3625]
Length = 144
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D V + + TV +A +++ IG++V++ G + I+GIFTERD
Sbjct: 4 SVKAILDAKGRDVVTAG----PNTTVSEAAVILSKKKIGAIVIV--GMENKISGIFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G + VA +MT K+ D+ + M LMT + RHVPV +G++
Sbjct: 58 VVHAIAKAGAACLDQPVASLMT--AKVYRCHEDSTVYDLMGLMTSRRFRHVPVETNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E +++ +I G
Sbjct: 116 GIISIGDVVKSRIAEVELEAEQIKAYIAG 144
>gi|433456893|ref|ZP_20414920.1| hypothetical protein D477_08108 [Arthrobacter crystallopoietes
BAB-32]
gi|432195635|gb|ELK52149.1| hypothetical protein D477_08108 [Arthrobacter crystallopoietes
BAB-32]
Length = 137
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
G+ C ++T+E A + M ++G+L + GE + G+ T+RD + K + +G P+
Sbjct: 9 TGNAECVGENETLEAAARKMLDLDVGALPIC--GEDNRLKGMVTDRDIVTKCLARGGDPR 66
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVV 189
+ E+ E K +T+ +D +I A++ M +R +PVIDG +VGM+S D+ R
Sbjct: 67 TAKAGELA--EGKPVTIGADDSIEEAIKTMQSHQVRRLPVIDGHDLVGMLSQADIARNYP 124
Query: 190 EQQKGELKRLNEFI 203
E + G+L EFI
Sbjct: 125 EDRVGDLV---EFI 135
>gi|296269591|ref|YP_003652223.1| putative CBS domain-containing signal transduction protein
[Thermobispora bispora DSM 43833]
gi|296092378|gb|ADG88330.1| putative signal transduction protein with CBS domains
[Thermobispora bispora DSM 43833]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Query: 70 KVGSWLCC-RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
K GS + R D TV + + +A+ NIG++VV G IAGI +ERD +R++ +G
Sbjct: 9 KKGSAVATVRPDATVRELLAKLAELNIGAVVVSPDG--NAIAGIVSERDVVRRLHERGAG 66
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRA 187
V+EIMT E + T + + + MT+ IRHVPV+ G R+VG++SI DVV++
Sbjct: 67 LLDAPVSEIMTVEVR--TCAPETTVDELRRTMTEYRIRHVPVVSGGRMVGLVSIGDVVKS 124
Query: 188 VVEQQKGELKRLNEFIRG 205
+++ + E + L ++ G
Sbjct: 125 AIDELETEREYLVGYLHG 142
>gi|386401921|ref|ZP_10086699.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385742547|gb|EIG62743.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + D + AVK + + IG+++V+ Q + GI +ER
Sbjct: 1 MTVRSILNTKGH----QIMSVEPDAKLAAAVKLLGEKKIGAVLVMN---QSRLEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R I +G VA++MT K++T + M++MT RH+PV+D G++
Sbjct: 54 DIVRVIGERGAGALDEPVAQVMT--RKVVTCKETDTVAELMEMMTTGKFRHLPVVDNGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|148261862|ref|YP_001235989.1| signal-transduction protein [Acidiphilium cryptum JF-5]
gi|326405367|ref|YP_004285449.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
gi|146403543|gb|ABQ32070.1| putative signal-transduction protein with CBS domains [Acidiphilium
cryptum JF-5]
gi|325052229|dbj|BAJ82567.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
Length = 145
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K + + + + + V +A+ IG++VV P + GI +ERD +R + G +
Sbjct: 11 KPTALISVPPEARIREVVVVLAEKRIGAVVVQSP--NSDLLGILSERDVVRSLAANGAAT 68
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAV 188
+++MT T + A LMTD RH+P++DG ++VG++SI DVV+++
Sbjct: 69 LEMEASQLMTRAPTTAT--PSTTVFEAENLMTDGRFRHLPIVDGGKLVGVVSIGDVVKSL 126
Query: 189 VEQQKGELKRLNEFIRG 205
+E Q E++ L E++ G
Sbjct: 127 IETQTHEVRSLREYVNG 143
>gi|167562988|ref|ZP_02355904.1| CBS domain protein [Burkholderia oklahomensis EO147]
gi|167570179|ref|ZP_02363053.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 83/147 (56%), Gaps = 11/147 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + GI T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDMPLRNAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV-G 177
+ ++ G S V +M ++ +T + +I ++M ++H R++PV+D R++ G
Sbjct: 56 ILRLKANGGSIGEVLVRTVM---DEPLTCTPETDIDEVRRMMLERHARYMPVLDKRVLMG 112
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIR 204
+IS DV + VVE Q E + L +IR
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|269126481|ref|YP_003299851.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
gi|268311439|gb|ACY97813.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
Length = 142
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
++L TKG S TV + + +A+ NIG++VV G IAGI +ERD +R
Sbjct: 5 DILRTKGS----SVATVEPTATVRELLAKLAELNIGAVVVSPDGAT--IAGIVSERDVVR 58
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMI 179
++ +G + V++IMT E + T +A + + MT+ IRHVPV+ G R+VG++
Sbjct: 59 RLHERGAALLDAPVSDIMTAEVR--TCAPEAAVDELRKTMTEHRIRHVPVVSGGRMVGLV 116
Query: 180 SIVDVVRAVVEQQKGELKRLNEFIRG 205
SI DVV++ +++ + E + L ++ G
Sbjct: 117 SIGDVVKSAIDELETEREHLVGYLHG 142
>gi|46200944|ref|ZP_00056074.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 146
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
G + D ++ DA + +AQH IG+++V+ +AGI +ERD +R +
Sbjct: 14 GGIVSVTPDASIGDAARLLAQHKIGAVLVMTG---DRVAGILSERDIVRGLADAMDVCVT 70
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVV 189
+V ++MT E + D + M++MT K IRH+PV+D G + GM++I DVV++ +
Sbjct: 71 AKVRDLMTAE--VFVCHEDDTVERLMEIMTAKRIRHLPVMDSSGEVTGMVTIGDVVKSRL 128
Query: 190 EQQKGELKRLNEFI 203
++ K E + L +++
Sbjct: 129 DETKMEAESLRDYV 142
>gi|389689370|ref|ZP_10178708.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388590281|gb|EIM30566.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 143
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V +L KG D V + RS + +A + +A+ IG+L+++ + + GI +ERD
Sbjct: 3 VNRILSIKGRD-VATIEPSRS---LSEAARVLAERRIGALLIVDG--HRPVVGIISERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R + QG V+ MT+ K++T + +I M+LMT + RH+PV++ GR+ G
Sbjct: 57 VRAVAAQGAKALDEPVSRFMTE--KVVTCTGETSINDIMELMTQQKFRHIPVVEGGRLSG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI DVV+ +E+ + E + + E+I
Sbjct: 115 IISIGDVVKLRLEEVEAETQAIKEYI 140
>gi|386847341|ref|YP_006265354.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
gi|359834845|gb|AEV83286.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
Length = 145
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
++++L KG + D +VE + +A H IG+ +V + G +AGI +ERD
Sbjct: 3 ISDILRVKGT----GVVTVPPDLSVEGLIAKLAHHRIGAAIVSRDGTA--VAGIVSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + G S V+ I T + + T+ DA + +LMTD RHVPV+ +G + G
Sbjct: 57 VRALASHGPSVLTDPVSSIQTTQVR--TVSPDAQLEDVERLMTDNRFRHVPVVQNGHLTG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGE 206
++SI DVV+ +++ + E L ++I G+
Sbjct: 115 IVSIGDVVKNRIDELETERTTLADYITGD 143
>gi|324999636|ref|ZP_08120748.1| signal-transduction protein [Pseudonocardia sp. P1]
Length = 141
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 87/146 (59%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + D+ V + ++ + + N+G+L V+ + + I GI +ERD
Sbjct: 3 IADVLKGKG----SAVTTVSPDEAVTEVLRFITEGNLGALPVV---DGERIVGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVP-VIDGRIVG 177
+R++ QG + RV+EIMT E ++T D + ++MT++ +RH+P V+DG + G
Sbjct: 56 VRRLHQQGGAMLNARVSEIMTAE--VVTCSPDDGVGDLAKIMTERRVRHLPVVVDGVLSG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI D+V+A ++ + E ++L +I
Sbjct: 114 IVSIGDLVKARIDMLEQEREQLESYI 139
>gi|407780017|ref|ZP_11127265.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
gi|407298147|gb|EKF17291.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
Length = 143
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG D V D ++ +A + +A+H IG++VV + Q IAGI +ER
Sbjct: 1 MTVKAILDTKGRDVV----TIAPDKSLAEAAQILAEHGIGAVVVTRDAGQ--IAGILSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + G + + V+ +MT K+ + MQ+MT+ RH+PV DGRI
Sbjct: 55 DIVRAVGQNGAAVLESPVSSVMT--AKVQRCREHHTVNEVMQIMTEGRFRHLPVEHDGRI 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
G+ISI DVV+ +E+ + E + + +I
Sbjct: 113 AGIISIGDVVKKRIEEVEREAEDIRSYI 140
>gi|338989098|ref|ZP_08633977.1| Signal-transduction protein [Acidiphilium sp. PM]
gi|338205963|gb|EGO94220.1| Signal-transduction protein [Acidiphilium sp. PM]
Length = 142
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K + + + + + V +A+ IG++VV P + GI +ERD +R + G +
Sbjct: 8 KPTALISVPPEARIREVVVVLAEKRIGAVVVQSP--NSDLLGILSERDVVRSLAANGAAT 65
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAV 188
+++MT T + A LMTD RH+P++DG ++VG++SI DVV+++
Sbjct: 66 LEMEASQLMTRAPTTAT--PSTTVFEAENLMTDGRFRHLPIVDGGKLVGVVSIGDVVKSL 123
Query: 189 VEQQKGELKRLNEFIRG 205
+E Q E++ L E++ G
Sbjct: 124 IETQTHEVRSLREYVNG 140
>gi|372486716|ref|YP_005026281.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
gi|359353269|gb|AEV24440.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
Length = 143
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 6/125 (4%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
+D TV +A + MA +G+L+V+ E + GIFTERD L +++ G P++T ++E+M
Sbjct: 20 ADLTVREACQRMAAARVGALLVV---EHGFLTGIFTERDALNRVLAPGLDPEHTLLSEVM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELK 197
T + + P + + +A+ LM RH+PV+ GR +GM+S+ D + A + + +L+
Sbjct: 77 TANPRAV--PPEKPLSYALHLMHIGGYRHMPVVQAGRPLGMVSVRDALGAEICDFERDLE 134
Query: 198 RLNEF 202
L +
Sbjct: 135 SLEKI 139
>gi|284033114|ref|YP_003383045.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
gi|283812407|gb|ADB34246.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
Length = 141
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 88/148 (59%), Gaps = 10/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+ +VL KG+ V + TV + + +A+HN+G+LVV G +AGI +ERD
Sbjct: 3 INDVLRGKGNQVV----TISPEATVTELLALLAEHNVGALVVSPDGTS--VAGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R ++ RV+ IMT +++ T D I + M+LMT++ IRHVPV+ DG + G
Sbjct: 57 VR-LLNSTPDAGEVRVSAIMT--SQVHTCGPDDLIDNLMRLMTEQRIRHVPVVVDGALTG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
++SI DVV++ + + + E ++L+ +I G
Sbjct: 114 IVSIGDVVKSRIGELEFEREQLSNYIAG 141
>gi|337285150|ref|YP_004624624.1| inosine-5'-monophosphate dehydrogenase II [Pyrococcus yayanosii
CH1]
gi|334901084|gb|AEH25352.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
yayanosii CH1]
Length = 177
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R DDTV + ++++ +GS VV+K E I GI TERD L K+V +G+ PK +V EI
Sbjct: 19 RPDDTVHKVARVLSRNKVGSAVVMKGDE---ILGIVTERDILDKVVAKGKDPKAIKVEEI 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGE 195
MT + + D ++ A+++M +K +R + V G+ +G ++ D++ A+ Q E
Sbjct: 76 MT--KTPVKIEYDYDVQEAIEVMIEKGVRRILVTKFGKPIGFVTATDLLSAIASQNNEE 132
>gi|407984288|ref|ZP_11164911.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
gi|407374129|gb|EKF23122.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
Length = 142
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + +V + +A HNIG++VV+ P + GI +ERD
Sbjct: 3 IADVLRNKGS----AVATITPETSVAGLLTELAVHNIGAMVVVSP---DGVVGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + +G V+EIMT + ++T + ++ +LMT+ +RHVPV+ +GR+ G
Sbjct: 56 VRALQRRGAELLTQPVSEIMT--SMVVTCSPEDSVDSLTRLMTENRVRHVPVLQNGRLAG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + + ++L +I
Sbjct: 114 IVSIGDVVKTRMEELEAQQEQLQAYI 139
>gi|393773610|ref|ZP_10362005.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
gi|392720913|gb|EIZ78383.1| hypothetical protein WSK_3002 [Novosphingobium sp. Rr 2-17]
Length = 141
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
G + C + TV +A +A IG+L V + G+ IAGIF+ERD + ++ G
Sbjct: 11 GPVVTCDASATVREAADLLADRRIGALPVTQHGQ---IAGIFSERDVIYRLRQFGADVLD 67
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVE 190
+ ++MT +T+ D +++ A+ LMT + IRH+PV+D G ++G +SI D+V+ ++
Sbjct: 68 MPIGDVMT--TPPVTVDPDTSVMAALSLMTRRRIRHLPVVDRGGMIGFVSIGDLVKYRID 125
Query: 191 QQKGELKRLNEFIR 204
+ + E + ++I+
Sbjct: 126 KIETEAAAMRDYIQ 139
>gi|388568543|ref|ZP_10154958.1| cbs domain containing protein [Hydrogenophaga sp. PBC]
gi|388264154|gb|EIK89729.1| cbs domain containing protein [Hydrogenophaga sp. PBC]
Length = 159
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG G+ D+ +E AV+ MAQ++IGSL V++ GE + G+ T R
Sbjct: 1 MKVSDILRVKG----GTLYTTSPDERLEVAVQTMAQYDIGSLAVMEHGE---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ L + + R+ + D++ + P + + +M ++H R++PV+D R +
Sbjct: 54 E-LIETLATNNGQLGGRIVRTVMDDHPMTCTP-ETELEQVRPMMLERHTRYMPVMDARML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|392401700|ref|YP_006438312.1| putative signal transduction protein with CBS domains [Turneriella
parva DSM 21527]
gi|390609654|gb|AFM10806.1| putative signal transduction protein with CBS domains [Turneriella
parva DSM 21527]
Length = 143
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
+ D+V AV++M L++L P + GI T++D LR I + + V E
Sbjct: 17 VKQSDSVLAAVRHMLSIKETGLLILTPAGD--VVGIITQKDVLRLIAERYTQLEKVEVWE 74
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGE 195
+M+ L T+PS+ + A+ LMT+ HI H+PV+ DG+ VG+IS+ D++ A +++ + E
Sbjct: 75 VMS--KNLTTVPSETPLDQALGLMTENHIHHLPVVRDGKTVGLISLDDIISARLKRTESE 132
Query: 196 LKRLNEFI 203
+ L +FI
Sbjct: 133 AQLLKDFI 140
>gi|421599520|ref|ZP_16042717.1| hypothetical protein BCCGELA001_17436 [Bradyrhizobium sp.
CCGE-LA001]
gi|404268373|gb|EJZ32856.1| hypothetical protein BCCGELA001_17436 [Bradyrhizobium sp.
CCGE-LA001]
Length = 142
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + D + AVK + + IG+++V+ Q + GI +ER
Sbjct: 1 MTVRSILNTKGH----QIMSVEPDAKLSAAVKLLGEKKIGAVLVMN---QSRLEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R + +G S VA++MT K++T + M+ MT RH+PVID G++
Sbjct: 54 DIVRVLGERGASVLDEPVAQVMT--RKVVTCKETDTVAELMETMTTGKFRHLPVIDNGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|365096668|ref|ZP_09331111.1| cbs domain-containing protein [Acidovorax sp. NO-1]
gi|363413694|gb|EHL20886.1| cbs domain-containing protein [Acidovorax sp. NO-1]
Length = 149
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTASPDEPLAGAVSLMAERDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ +V G V M D TL +D + ++M D+H R++PV+D R +
Sbjct: 54 EVIQALVKNGGGVGTMLVRTAMDDAPLTCTLETDMD--EVRRMMLDRHARYMPVMDRRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|126735621|ref|ZP_01751366.1| CBS domain protein [Roseobacter sp. CCS2]
gi|126714808|gb|EBA11674.1| CBS domain protein [Roseobacter sp. CCS2]
Length = 144
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 64 MTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123
M K +VG + + TV DA K +++H IG++VV GE + GI +ERD +R++
Sbjct: 6 MLKSKPEVG-VISVKPTATVTDAAKLLSKHRIGTVVVSADGET--LDGILSERDIVRELG 62
Query: 124 GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIV 182
+G V ++MT KL T N L +++MT RH+PV+D G++VG+ISI
Sbjct: 63 KRGMGCLNDPVRDLMT--AKLTTCGPSNNALEVLEIMTAGRFRHLPVMDNGKMVGLISIG 120
Query: 183 DVVRAVVEQQKGELKRLNEFIRG 205
D V+ + Q E + L I G
Sbjct: 121 DAVKGRLAQLAMEKESLEGMIMG 143
>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
Length = 173
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 43 SSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLK 102
++S S + + + +V +VL D K G + + T+ DAV + + IG+L+ +
Sbjct: 18 TTSQSVSSNTTVSHATVQDVL----DKKDGRIITIHPEQTLHDAVVLLRDNRIGALLCVD 73
Query: 103 PGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTD 162
E+ +AGI +ERD +RK+ Q RV E+MT + T +D ++ ++LMT+
Sbjct: 74 --EEGKLAGILSERDIVRKLADQPGKTLPHRVEEVMT--RTVETCTADEPLVVVLRLMTE 129
Query: 163 KHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
RH+PV+DG ++GMI+I DVV + Q + E ++ + I G
Sbjct: 130 GRFRHMPVVDGDALIGMITIGDVVHFRLNQLELEALQIKQLIVG 173
>gi|134094437|ref|YP_001099512.1| hypothetical protein HEAR1208 [Herminiimonas arsenicoxydans]
gi|133738340|emb|CAL61385.1| conserved hypothetical protein; putative CBS domain [Herminiimonas
arsenicoxydans]
Length = 151
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ D + DAV MA+ +IGSLVV++ G ++ G+ + R
Sbjct: 1 MKVSEILKVKGN----ILFTVTPDSPMLDAVNVMAEKDIGSLVVMEKG---NLIGMLSFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI- 175
+ + I G + V + M ++ IT+ D I ++M +KH R+VPV+DG+I
Sbjct: 54 EVMATIHAHGGAIGGGSVRQHM--DSSPITISCDTEINEVRRMMLEKHARYVPVMDGKIL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
VG+IS DV +AV+E Q E K L +I+
Sbjct: 112 VGVISFYDVAKAVLEAQSFENKMLKSYIQS 141
>gi|418697249|ref|ZP_13258243.1| CBS domain protein [Leptospira kirschneri str. H1]
gi|409955024|gb|EKO13971.1| CBS domain protein [Leptospira kirschneri str. H1]
Length = 146
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D +V L + V D VK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRRV---LSVEPETLVMDVVKFMTKYDIGSVIILGEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI-VGMISI 181
G V+E+MT + T+ + ++ + +M K IRH+P+++ I +G+ISI
Sbjct: 60 AELGLDLFKKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDILIGIISI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYSE 142
>gi|284162404|ref|YP_003401027.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
gi|284012401|gb|ADB58354.1| putative signal transduction protein with CBS domains
[Archaeoglobus profundus DSM 5631]
Length = 177
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R DDT+ A K M + +GS+VV++ G GI TE+D L K+V + + P ++ +I
Sbjct: 19 RKDDTLLTASKKMIKFGVGSVVVIEDGRP---IGIVTEKDILYKVVSKNKLPSKVKLKDI 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKGE 195
M+ LIT+ ++ A +M + IR +PV+D G ++G+++ D++ V+ +
Sbjct: 76 MS--TPLITIKPTTSLREAADIMRKRGIRRLPVVDDNGNLIGIVTDNDILSVVI-----D 128
Query: 196 LKRLNEFIRGEYY 208
L E ++ EYY
Sbjct: 129 LGEFAELLKNEYY 141
>gi|337279096|ref|YP_004618567.1| CBS domain-containing protein [Ramlibacter tataouinensis TTB310]
gi|334730172|gb|AEG92548.1| CBS domain proteins-like protein [Ramlibacter tataouinensis TTB310]
Length = 154
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV+ MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTVGPDEPLGRAVEVMAEKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + IV G S TRV M D +T S+ + ++M ++H R++PV+D R +
Sbjct: 54 EVILCIVKNGGSVGNTRVRSAMDDHP--LTCTSETELDEVRRMMLERHARYMPVMDRRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENRMLKAYIR 140
>gi|325963150|ref|YP_004241056.1| hypothetical protein Asphe3_17660 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469237|gb|ADX72922.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 137
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
G C ++T+E A + M + ++GSL + GE + G+ T+RD + K + +G P+
Sbjct: 9 TGGAECVGENETLEAAARKMKELDVGSLPIC--GEDNRLKGMLTDRDIVIKCLAEGGDPR 66
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
E E K +T+ +D +I A++ M D +R +PVIDG +VG++S D+ +
Sbjct: 67 TATAGEF--GEGKPVTIGADDSIEEAIRTMQDHQVRRLPVIDGHNLVGVLSQGDIAKNYP 124
Query: 190 EQQKGEL 196
E + GEL
Sbjct: 125 EDRVGEL 131
>gi|398786405|ref|ZP_10549146.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
gi|396993706|gb|EJJ04767.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
Length = 149
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C ++D+V DA + + +G+L + G + G+ T+RD + K++G+G+ P+ T+
Sbjct: 3 CIGAEDSVLDAACTLTRLAVGALPIR--GSDGSLTGVLTDRDIVIKVLGKGKDPRRTKAG 60
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKG 194
E+ ++T+ +D + + M +R +PVID GR+VGM+++ DV RA+ G
Sbjct: 61 EL---AQGVVTVGADDDADEIFRTMASHKVRRLPVIDGGRLVGMVALADVARALPNLHAG 117
Query: 195 EL 196
L
Sbjct: 118 SL 119
>gi|443326955|ref|ZP_21055593.1| CBS domain-containing protein [Xenococcus sp. PCC 7305]
gi|442793453|gb|ELS02902.1| CBS domain-containing protein [Xenococcus sp. PCC 7305]
Length = 205
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV DAVK M + + +L+V +P + GI TE D + K+ G PK RV EIMT
Sbjct: 20 TVADAVKVMKEKGLRALIV-EPRSDRDPYGIVTETDVIYKVAAYGNDPKKMRVFEIMT-- 76
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMISIVDVVRA--VVEQQ 192
IT+ + + +A +L + R PVI+G+++G++S+ D++R V E+Q
Sbjct: 77 KPCITMQPNLGVEYAARLFANTRTRRAPVIEGKLLGIVSVSDILRKSDVAEEQ 129
>gi|161524964|ref|YP_001579976.1| XRE family transcriptional regulator [Burkholderia multivorans ATCC
17616]
gi|189350289|ref|YP_001945917.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221197721|ref|ZP_03570767.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221204721|ref|ZP_03577738.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221214916|ref|ZP_03587884.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|421467912|ref|ZP_15916493.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|421475871|ref|ZP_15923803.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160342393|gb|ABX15479.1| putative transcriptional regulator, XRE family [Burkholderia
multivorans ATCC 17616]
gi|189334311|dbj|BAG43381.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221165143|gb|EED97621.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221175578|gb|EEE08008.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221181653|gb|EEE14054.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|400229504|gb|EJO59351.1| CBS domain protein [Burkholderia multivorans CF2]
gi|400232997|gb|EJO62579.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 151
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + GI T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGILTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + ++ G + +V ++M DE T +D N ++M ++H R++PV+D +++
Sbjct: 54 EIILRLRENGGAIGDVQVRKVM-DEPLTCTPETDVN--EVRRMMLERHARYMPVLDKKVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|300691302|ref|YP_003752297.1| hypothetical protein RPSI07_1652 [Ralstonia solanacearum PSI07]
gi|299078362|emb|CBJ51012.1| conserved protein of unknown function, CBS
(cystathionine-beta-synthase) domain [Ralstonia
solanacearum PSI07]
gi|344167579|emb|CCA79817.1| conserved hypothetical protein, CBS (cystathionine-beta-synthase)
domain [blood disease bacterium R229]
gi|344174537|emb|CCA86335.1| conserved hypothetical protein, CBS (cystathionine-beta-synthase)
domain [Ralstonia syzygii R24]
Length = 151
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + ++ AV+ MA+++IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSDILHVKGN----TLYTVAPETKLQVAVQTMAEYDIGSLVVMEYGE---LVGMLTFR 53
Query: 117 DYLRKIV-GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR- 174
+ + + G G+ T + ++M D T ++ N ++M ++H R++PV+D R
Sbjct: 54 EIILVLARGNGKVDDGTTIRKVMDDHPLTCTPETEVN--EVRRMMLERHARYLPVLDNRT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV +AV E+Q E K L +IR
Sbjct: 112 LMGVISFYDVAKAVFEEQNFENKMLKAYIR 141
>gi|404421975|ref|ZP_11003678.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403658419|gb|EJZ13153.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 143
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 10/129 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + + TV + + + + NIG++VV+ P + +AGI +ERD
Sbjct: 3 IADVLKNKGT----AVVTISPETTVTELLAGLTELNIGAMVVMGP---EGLAGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+RK+ +G S V+EIMT T P D + H LMT+ +RH+PV+D GR+ G
Sbjct: 56 VRKLHERGSSLLAQPVSEIMTTVVATCT-PRD-TVDHLSALMTENRVRHIPVLDRGRLAG 113
Query: 178 MISIVDVVR 186
++SI D+V+
Sbjct: 114 IVSIGDIVK 122
>gi|163851685|ref|YP_001639728.1| hypothetical protein Mext_2262 [Methylobacterium extorquens PA1]
gi|218530491|ref|YP_002421307.1| signal transduction protein with CBS domains [Methylobacterium
extorquens CM4]
gi|240138851|ref|YP_002963326.1| hypothetical protein MexAM1_META1p2261 [Methylobacterium extorquens
AM1]
gi|254561457|ref|YP_003068552.1| hypothetical protein METDI3043 [Methylobacterium extorquens DM4]
gi|418062143|ref|ZP_12699951.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens DSM 13060]
gi|163663290|gb|ABY30657.1| CBS domain containing protein [Methylobacterium extorquens PA1]
gi|218522794|gb|ACK83379.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens CM4]
gi|240008823|gb|ACS40049.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens AM1]
gi|254268735|emb|CAX24696.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
gi|373564304|gb|EHP90425.1| putative signal transduction protein with CBS domains
[Methylobacterium extorquens DSM 13060]
Length = 143
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQ-HIAGIFTE 115
++VA +L KGD S + T+++A+ +A+ IG+LVV G+ + + GI +E
Sbjct: 1 MTVARILAEKGD----SVVTLPPHRTIDEAIHLLAEKRIGALVV---GDAEGRVIGILSE 53
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RD +R + +G S ++ MT K++T A+I M+ MT+ RH+PV+ +GR
Sbjct: 54 RDVMRALASEGASALDRPISHHMT--TKVVTCTRRASIEDVMETMTEGRFRHLPVVEEGR 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+VG++SI DVV+ + + E + + ++I
Sbjct: 112 LVGVVSIGDVVKRRIATVEAEHQAMRDYI 140
>gi|83310691|ref|YP_420955.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82945532|dbj|BAE50396.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 145
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L + TV +A + M +G+++V + GIFTERD L +++ +G +P T +
Sbjct: 16 LTLPAAATVREAARQMKARRVGAVMVTD--HHGKLKGIFTERDCLFRVLAEGVNPDTTTL 73
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVV---RAVVE 190
A +MT + IT +D + HA+ +M D RH+PV+D G VGMISI D + + E
Sbjct: 74 ALVMTADPTTIT--ADRKLGHALHMMHDNGFRHIPVVDHGIPVGMISIRDALGSELSAFE 131
Query: 191 QQKGELKRLNEFI 203
++K + L E +
Sbjct: 132 REKAKKSELGEIL 144
>gi|331696184|ref|YP_004332423.1| signal transduction protein [Pseudonocardia dioxanivorans CB1190]
gi|326950873|gb|AEA24570.1| putative signal transduction protein with CBS domains
[Pseudonocardia dioxanivorans CB1190]
Length = 138
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R D+ V +A +A +G+L + G + G+ T+RD + K++ G+ P R E+
Sbjct: 16 RGDEPVREAATKLADAGVGALPIC--GVDDQLVGMLTDRDIVTKVIAAGKDPLAVRAGEL 73
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGEL 196
+ + +T+ +D ++ M+ M +R VPVIDG R+VG+IS+ DV R++ + G L
Sbjct: 74 A--QGEAVTVGADDDVAELMRTMVAHKVRRVPVIDGTRVVGVISLADVARSLDDADTGML 131
>gi|53719576|ref|YP_108562.1| hypothetical protein BPSL1964 [Burkholderia pseudomallei K96243]
gi|53725416|ref|YP_102671.1| hypothetical protein BMA0944 [Burkholderia mallei ATCC 23344]
gi|67642694|ref|ZP_00441447.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76808985|ref|YP_333265.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
gi|121599268|ref|YP_992809.1| hypothetical protein BMASAVP1_A1478 [Burkholderia mallei SAVP1]
gi|124383341|ref|YP_001026403.1| hypothetical protein BMA10229_A0404 [Burkholderia mallei NCTC
10229]
gi|126439295|ref|YP_001058728.1| hypothetical protein BURPS668_1687 [Burkholderia pseudomallei 668]
gi|126451035|ref|YP_001080325.1| hypothetical protein BMA10247_0759 [Burkholderia mallei NCTC 10247]
gi|126454211|ref|YP_001065981.1| hypothetical protein BURPS1106A_1710 [Burkholderia pseudomallei
1106a]
gi|134282216|ref|ZP_01768921.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167002921|ref|ZP_02268711.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167719875|ref|ZP_02403111.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167738877|ref|ZP_02411651.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167816100|ref|ZP_02447780.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167824472|ref|ZP_02455943.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167846008|ref|ZP_02471516.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167894582|ref|ZP_02481984.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167902984|ref|ZP_02490189.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167911224|ref|ZP_02498315.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167919245|ref|ZP_02506336.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217423669|ref|ZP_03455170.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226192922|ref|ZP_03788534.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237811993|ref|YP_002896444.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242315143|ref|ZP_04814159.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254178427|ref|ZP_04885082.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254180023|ref|ZP_04886622.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254188567|ref|ZP_04895078.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254197241|ref|ZP_04903663.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254199608|ref|ZP_04905974.1| CBS domain protein [Burkholderia mallei FMH]
gi|254205926|ref|ZP_04912278.1| CBS domain protein [Burkholderia mallei JHU]
gi|254261201|ref|ZP_04952255.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254297857|ref|ZP_04965310.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254358673|ref|ZP_04974946.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386861998|ref|YP_006274947.1| hypothetical protein BP1026B_I1931 [Burkholderia pseudomallei
1026b]
gi|403518411|ref|YP_006652544.1| hypothetical protein BPC006_I1757 [Burkholderia pseudomallei
BPC006]
gi|418387564|ref|ZP_12967419.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418534145|ref|ZP_13099994.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418541190|ref|ZP_13106687.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418547430|ref|ZP_13112589.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418553610|ref|ZP_13118429.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52209990|emb|CAH35963.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428839|gb|AAU49432.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76578438|gb|ABA47913.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121228078|gb|ABM50596.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124291361|gb|ABN00630.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126218788|gb|ABN82294.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126227853|gb|ABN91393.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126243905|gb|ABO06998.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134246254|gb|EBA46343.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147749204|gb|EDK56278.1| CBS domain protein [Burkholderia mallei FMH]
gi|147753369|gb|EDK60434.1| CBS domain protein [Burkholderia mallei JHU]
gi|148027800|gb|EDK85821.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157807702|gb|EDO84872.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157936246|gb|EDO91916.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160699466|gb|EDP89436.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169653982|gb|EDS86675.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184210563|gb|EDU07606.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217393527|gb|EEC33548.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225935012|gb|EEH30987.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237503401|gb|ACQ95719.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238523883|gb|EEP87319.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242138382|gb|EES24784.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243061467|gb|EES43653.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254219890|gb|EET09274.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385358699|gb|EIF64684.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385360004|gb|EIF65950.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385361215|gb|EIF67103.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385371448|gb|EIF76627.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385376252|gb|EIF80951.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385659126|gb|AFI66549.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403074053|gb|AFR15633.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L KG+ + D + AV MA+H+IGSLVV++ G+ + GI T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV-G 177
+ ++ G S V +M ++ +T + +I ++M ++H R++PV+D +++ G
Sbjct: 56 ILRLKANGGSIGEVLVRTVM---DEPLTCTPETDIDEVRRMMLERHARYMPVLDKKVLMG 112
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIR 204
+IS DV + VVE Q E + L +IR
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|451339062|ref|ZP_21909587.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449418235|gb|EMD23833.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 143
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 83/136 (61%), Gaps = 10/136 (7%)
Query: 72 GSWLCCRSDDT-VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
G+ + S +T V + ++ +A+HN+G+LVV+ ++ I GI +ERD +R++ +G
Sbjct: 11 GAAVATVSPETNVTELLERLAEHNVGALVVVD--DEGGIVGIVSERDVVRRLNERGPQLL 68
Query: 131 YTRVAEIMTDENKLIT--LPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRA 187
VA IMT KL+ P D+ + LMT++ IRHVPV +DGR+ G++SI DVV+
Sbjct: 69 DGSVAAIMT---KLVASCTPEDS-VDQLSVLMTERRIRHVPVLVDGRLAGIVSIGDVVKT 124
Query: 188 VVEQQKGELKRLNEFI 203
+EQ + ++L +I
Sbjct: 125 RMEQLEKSQEQLEAYI 140
>gi|24214226|ref|NP_711707.1| signal transduction protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45658085|ref|YP_002171.1| hypothetical protein LIC12236 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386073694|ref|YP_005988011.1| putative signal transduction protein containing CBS domains
[Leptospira interrogans serovar Lai str. IPAV]
gi|417764975|ref|ZP_12412942.1| CBS domain protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417782778|ref|ZP_12430502.1| CBS domain protein [Leptospira interrogans str. C10069]
gi|418668723|ref|ZP_13230123.1| CBS domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418708008|ref|ZP_13268821.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|421085560|ref|ZP_15546411.1| CBS domain protein [Leptospira santarosai str. HAI1594]
gi|421101901|ref|ZP_15562512.1| CBS domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421122646|ref|ZP_15582929.1| CBS domain protein [Leptospira interrogans str. Brem 329]
gi|24195133|gb|AAN48725.1| predicted signal transduction protein containing CBS domains
[Leptospira interrogans serovar Lai str. 56601]
gi|45601326|gb|AAS70808.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353457483|gb|AER02028.1| putative signal transduction protein containing CBS domains
[Leptospira interrogans serovar Lai str. IPAV]
gi|400353419|gb|EJP05595.1| CBS domain protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409954193|gb|EKO08688.1| CBS domain protein [Leptospira interrogans str. C10069]
gi|410344546|gb|EKO95712.1| CBS domain protein [Leptospira interrogans str. Brem 329]
gi|410368574|gb|EKP23951.1| CBS domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431125|gb|EKP75485.1| CBS domain protein [Leptospira santarosai str. HAI1594]
gi|410755455|gb|EKR17085.1| CBS domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410771498|gb|EKR46699.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|455790598|gb|EMF42453.1| CBS domain protein [Leptospira interrogans serovar Lora str. TE
1992]
gi|456822352|gb|EMF70838.1| CBS domain protein [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456968100|gb|EMG09353.1| CBS domain protein [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 146
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++ K D +V L + V D VK M +++IGS+++L G+ + GIFTERD L
Sbjct: 6 ILAKKDRRV---LSVEPETLVMDVVKFMTKYDIGSVIILGEGK---LKGIFTERDVLHLS 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISI 181
G V+E+MT + T+ + ++ + +M K IRH+P+++ ++G+ISI
Sbjct: 60 AELGLDLFKKSVSEVMT--TSITTMTPEDDVDELLSIMLKKRIRHMPILENDTLIGIISI 117
Query: 182 VDVVRAVVEQQKGELKRLNEFIRGE 206
D V+A +E+ + E K L +++ E
Sbjct: 118 GDAVKAKIEKTEEENKNLKQYMYSE 142
>gi|452124905|ref|ZP_21937489.1| hypothetical protein F783_04940 [Bordetella holmesii F627]
gi|452128312|ref|ZP_21940889.1| hypothetical protein H558_05025 [Bordetella holmesii H558]
gi|451924135|gb|EMD74276.1| hypothetical protein F783_04940 [Bordetella holmesii F627]
gi|451925359|gb|EMD75497.1| hypothetical protein H558_05025 [Bordetella holmesii H558]
Length = 151
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V A++ M++ +IGSLV+++ G ++G+ T R
Sbjct: 1 MKVSEILRVKGD----TLYTATPDTLVSVAIRTMSEQDIGSLVIMESG---MLSGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + T + IM D ++ + A+ +LM DKH R++PV+DG +
Sbjct: 54 EIMRHLESSDGRVGETTIRAIMDDAPVSVSPNTSAD--EVQRLMLDKHARYIPVMDGPTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 112 MGVISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|443287933|ref|ZP_21027028.1| Hypoxic response protein, signal transduction protein with CBS
domains [Micromonospora lupini str. Lupac 08]
gi|443287945|ref|ZP_21027039.1| Hypoxic response protein, signal transduction protein with CBS
domains [Micromonospora lupini str. Lupac 08]
gi|385881907|emb|CCH22132.1| Hypoxic response protein, signal transduction protein with CBS
domains [Micromonospora lupini str. Lupac 08]
gi|385882020|emb|CCH22121.1| Hypoxic response protein, signal transduction protein with CBS
domains [Micromonospora lupini str. Lupac 08]
Length = 139
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C R D ++ A K MA+ +GSL + G+ + G+ T+RD + K++ +GR P
Sbjct: 14 CVREQDDLKSAAKRMAELGVGSLPIC--GDDNRLKGMLTDRDIVVKVLAEGRDPANVTAG 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKG 194
E+ + + +T+ +D + ++ M +R +PVIDG +VG++++ DV R++ E+ G
Sbjct: 72 ELA--QGEAVTIGADDDAGEILRTMGKHKVRRLPVIDGHELVGIVAVADVARSLPERPVG 129
Query: 195 EL 196
+L
Sbjct: 130 DL 131
>gi|241765080|ref|ZP_04763072.1| CBS domain containing protein [Acidovorax delafieldii 2AN]
gi|241365317|gb|EER60139.1| CBS domain containing protein [Acidovorax delafieldii 2AN]
Length = 149
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTVTPDEPLSGAVSVMAEKDIGSLVVMELGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ V G S V M D TL +D + + M L D+H R++PV+D + +
Sbjct: 54 EVIQATVRNGGSVGTMHVRSAMDDHPLTCTLETDMDEVRRMML--DRHARYMPVMDKKML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AVV+ Q E K L +IR
Sbjct: 112 MGVVSFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|383770962|ref|YP_005450025.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
gi|381359083|dbj|BAL75913.1| hypothetical protein S23_27010 [Bradyrhizobium sp. S23321]
Length = 142
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + + AVK + + IG+++V+ Q + GI +ER
Sbjct: 1 MTVRSILNTKGH----QIMSVEPGAKLAAAVKLLGEKKIGAVLVMN---QSRLEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R I +G V+E+MT K++T + M++MT+ RH+PVID G++
Sbjct: 54 DIVRVIGERGAGALDEPVSEVMT--RKVVTCKEADTVAELMEMMTEGKFRHLPVIDNGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|415917740|ref|ZP_11554156.1| CBS domain containing protein [Herbaspirillum frisingense GSF30]
gi|407761303|gb|EKF70393.1| CBS domain containing protein [Herbaspirillum frisingense GSF30]
Length = 153
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ D +++AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSEILKVKGN----ILFTVTPDTPIQEAVAAMAEKDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ L + G + + V + M D IT+ D ++ ++M +KH R+VPV++ R +
Sbjct: 54 EVLLTLHKNGGALGGSTVRKHMNDAP--ITVTPDTDLNEVRRIMLEKHARYVPVMEARTV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AV++ Q E K L +IR
Sbjct: 112 LGVMSFYDVAKAVLDAQGFENKMLKAYIR 140
>gi|291614479|ref|YP_003524636.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
gi|291584591|gb|ADE12249.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
Length = 143
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
DDTV A+ M + +IG+++V+ EQ + G+FTERD L K+ +PK V E+M+
Sbjct: 21 DDTVHYALVLMRERDIGAVMVV---EQGKLIGVFTERDCLHKVSSLCLNPKEVLVREVMS 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQQKGELK 197
+ + +T + + + LMT++ RH+PV+D + I+G++SI D+V+A + Q ++
Sbjct: 78 TKVRYVT--TAMGVSQCLALMTERFFRHLPVLDDQKNILGIVSIGDLVKARLSDQDFIIE 135
Query: 198 RLNEFI 203
++ +I
Sbjct: 136 QMERYI 141
>gi|163746629|ref|ZP_02153986.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
gi|161379743|gb|EDQ04155.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
Length = 144
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L TK DDKV + + + +A +A+ IG+LV+ G+ GI +ERD
Sbjct: 3 VSQILKTKPDDKV---VTTKPGLAISEAAAMLAEKRIGTLVISADGKTPD--GILSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ QG V IMT KL+T D +Q MTD RH+PV+ +G +VG
Sbjct: 58 VRELGRQGAGCLQQTVESIMT--TKLVTCSRDDRSDAILQKMTDGRFRHMPVLENGELVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+IS+ DVV+A + + E + L I G
Sbjct: 116 LISLGDVVKAQLMELSMEKQALEGMIMG 143
>gi|260565500|ref|ZP_05835984.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|265991326|ref|ZP_06103883.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|260151568|gb|EEW86662.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|263002110|gb|EEZ14685.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 143
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG D V S DT+ AV + +H IG+LVV E HI GI +E
Sbjct: 1 MTVRSILETKGRDVV----VIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSEC 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R + Q VAE+MT +K+ I M++MT RH+PV + G++
Sbjct: 55 DVVRALAAQESQAMSKSVAEVMT--SKVQVCHEHHTINQVMKIMTRSRFRHMPVEEGGKL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI DVV+ +E + E + + +I
Sbjct: 113 VGIISIGDVVKRRIEDVEREAEDIRTYI 140
>gi|134295527|ref|YP_001119262.1| XRE family transcriptional regulator [Burkholderia vietnamiensis
G4]
gi|387902047|ref|YP_006332386.1| hypothetical protein MYA_1291 [Burkholderia sp. KJ006]
gi|134138684|gb|ABO54427.1| putative transcriptional regulator, XRE family [Burkholderia
vietnamiensis G4]
gi|387576939|gb|AFJ85655.1| CBS domain protein [Burkholderia sp. KJ006]
Length = 151
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ ++++ G + +V ++M DE T +D N ++M ++H R++PV+D +++
Sbjct: 54 EIIQRLHVNGGAIGDVQVRKVM-DEPLTCTPETDVN--EVRRMMLERHARYMPVLDKKVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|83719350|ref|YP_443131.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|167582140|ref|ZP_02375014.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167620299|ref|ZP_02388930.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257139361|ref|ZP_05587623.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83653175|gb|ABC37238.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 154
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L KG+ + D + AV MA+H+IGSLVV++ G+ + GI T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV-G 177
+ ++ G S V +M ++ +T + +I ++M ++H R++PV+D +++ G
Sbjct: 56 ILRLKANGGSVGDVLVRTVM---DEPLTCTPETDIDEVRRMMLERHARYMPVLDKKVLMG 112
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIR 204
+IS DV + VVE Q E + L +IR
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|424881702|ref|ZP_18305334.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518065|gb|EIW42797.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii WU95]
Length = 144
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRD----VITAGPSTTVAEAATILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ +A++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKHGKEGLDQSLAQVMT--AKVYRCNEETTVNELMELMTSRRFRHVPVETNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|407983659|ref|ZP_11164307.1| CBS domain protein [Mycobacterium hassiacum DSM 44199]
gi|407374771|gb|EKF23739.1| CBS domain protein [Mycobacterium hassiacum DSM 44199]
Length = 272
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 77/132 (58%), Gaps = 16/132 (12%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ +DTV +A + + + IG++ V K + + GI T+RD + +G+G P T +
Sbjct: 1 MVLNPNDTVLEAARAIEANRIGAVAVQK---DRRLVGIATDRDLTVRALGRGLDPSSTTI 57
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV-------- 185
+E+MT + L P D ++ A++LM +++IR +P++ DGRIVGM+++ D++
Sbjct: 58 SEVMT-PSPLTLSPRD-SVDDAIRLMKERNIRRIPLVEDGRIVGMVTLDDLILEEAAPLE 115
Query: 186 --RAVVEQQKGE 195
AVVE Q GE
Sbjct: 116 ELAAVVEAQIGE 127
>gi|254560087|ref|YP_003067182.1| hypothetical protein METDI1604 [Methylobacterium extorquens DM4]
gi|254267365|emb|CAX23200.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
Length = 143
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++VA +L KG S + R DD + DA+ + ++ IG+LVV+ GE + + GI +ER
Sbjct: 1 MTVAHILAEKG----SSVVTVRPDDPLADAIHLLTENGIGALVVM--GEARTVVGIISER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D + + G + V+ MT K++T + M+LMT+ RH+PV + G++
Sbjct: 55 DIMHALAAHGATALDLPVSRQMT--RKVVTCRRETTNDEVMRLMTEGRFRHMPVCESGKL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI DV+ + + E + + ++I
Sbjct: 113 VGIISIHDVIERQLAVLEAERQAMRDYI 140
>gi|149926364|ref|ZP_01914625.1| hypothetical protein LMED105_13233 [Limnobacter sp. MED105]
gi|149824727|gb|EDM83941.1| hypothetical protein LMED105_13233 [Limnobacter sp. MED105]
Length = 157
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 18/157 (11%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V EVL KG+ + + + D V MA H++GSLVV+ G +AGI T R
Sbjct: 1 MQVKEVLRVKGN----TLFTVTPETNLSDCVVTMADHDVGSLVVMDKGV---LAGIVTFR 53
Query: 117 DYLRKIVGQ------GRSPKYTRVA--EIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ +R + + G +P + E+M E + TL + + L +LM + H R++
Sbjct: 54 EVIRVLAKRQKEHRTGPTPPVAEIVVREVMNTEPTVATLDMEVDSLR--KLMLENHQRYL 111
Query: 169 PVIDGR-IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
PV+DG + G+IS DV +AV+E+Q E K L +IR
Sbjct: 112 PVMDGNTLCGVISFHDVAKAVLEEQGFENKMLKGYIR 148
>gi|167587382|ref|ZP_02379770.1| putative transcriptional regulator, XRE family protein
[Burkholderia ubonensis Bu]
Length = 154
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDTPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + ++ G + +V ++M DE T +D N ++M ++H R++PV+D +++
Sbjct: 54 EIILRLRENGGAIGEVQVRKVM-DEPLTCTPETDVN--EVRRMMLERHARYMPVLDKKVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
autotrophicus Py2]
Length = 143
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDD-TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
++V+ +L KG+D +C D TV DAV +A IG++VV+ + + GI +E
Sbjct: 1 MTVSVILSRKGND-----ICTIGPDATVGDAVARLAGRRIGAIVVVD--DAMSVEGIISE 53
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R 174
RD +R I QG + ++ +MT ++T D + M+ MT RHVPV+ G +
Sbjct: 54 RDVVRLIGEQGVNVLAEPLSSVMT--RAVVTCTPDETVPVIMERMTRGRFRHVPVVSGDK 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+VG+ISI DVV+ VE+ + E +L ++I
Sbjct: 112 LVGIISIGDVVKFRVEEMERESAQLRDYI 140
>gi|167836867|ref|ZP_02463750.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424904149|ref|ZP_18327659.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
gi|390930127|gb|EIP87529.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
Length = 154
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L KG+ + D + AV MA+H+IGSLVV++ G+ + GI T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV-G 177
+ ++ G S V +M ++ +T + +I ++M ++H R++PV+D +++ G
Sbjct: 56 ILRLKANGGSIGDVLVRTVM---DEPLTCTPETDIDEVRRMMLERHARYMPVLDKKVLMG 112
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIR 204
+IS DV + VVE Q E + L +IR
Sbjct: 113 VISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|254440558|ref|ZP_05054052.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
gi|198256004|gb|EDY80318.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
Length = 145
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L +K G L SD V DA + M++ IG++V+ G AGI +ERD
Sbjct: 3 VSQILKSKA---TGGVLTLTSDANVADAARIMSEKRIGAVVISDDGGATP-AGILSERDI 58
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITL-PSDANILHAMQLMTDKHIRHVPVID-GRIV 176
+R++ QG S V+++MT KL+T PSD + MT RH+PV+D G++V
Sbjct: 59 VRELGKQGPSCMALVVSDMMT--KKLVTCSPSDTTD-SVLVKMTQGRFRHMPVMDGGKMV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D V+A + + E L + G
Sbjct: 116 GLISIGDAVKARLSELAAERDALTGMVMG 144
>gi|308808997|ref|XP_003081808.1| unnamed protein product [Ostreococcus tauri]
gi|116060275|emb|CAL55611.1| unnamed protein product [Ostreococcus tauri]
Length = 258
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 40/162 (24%)
Query: 83 VEDAVKNMAQHNIGSLVVLK-------------------PGEQQHIAGIFTERDYLRKIV 123
V +AV+ M ++G+LVV+ E I GIFTERDYL +
Sbjct: 96 VSEAVRQMHATDLGALVVMDRIALDADATGVISDEELALSAENDAIIGIFTERDYLNAVA 155
Query: 124 GQGRSPKYTRVAEIMT-------DENKLITLPSDANILHAMQLMTDKHIRHVPV------ 170
SPK T+V+EIMT ++L+ + L AM+ MT +RH+PV
Sbjct: 156 KGVISPK-TKVSEIMTGFRDASTQVSRLVCVSPQDTALAAMESMTTHRLRHIPVISSKGI 214
Query: 171 -------IDGRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
I+ R++G++SI +V++A++ + + E++ L +I G
Sbjct: 215 DSKTKTPIEPRVLGVVSIGEVLKALLAESRSEIEHLESYILG 256
>gi|379706287|ref|YP_005261492.1| hypothetical protein NOCYR_0023 [Nocardia cyriacigeorgica GUH-2]
gi|374843786|emb|CCF60848.1| conserved protein of unknown function; putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 139
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV A + MA+ +GSLV+ E + + GI T+RD + K + QG SP TR AE+
Sbjct: 18 DQTVAQAARVMAELGVGSLVIAD--ENERMCGIITDRDIVVKCIAQGLSPSGTRAAELCE 75
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGEL 196
+ I+ +DA++ + M ++ +PVI+ R++GMIS D+ R + + Q GE
Sbjct: 76 ATPRWIS--ADADVDEVLDEMETHQVKRMPVIENKRLIGMISEADLARHLDDNQLGEF 131
>gi|383825420|ref|ZP_09980570.1| transcriptional regulator [Mycobacterium xenopi RIVM700367]
gi|383335150|gb|EID13582.1| transcriptional regulator [Mycobacterium xenopi RIVM700367]
Length = 142
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 10/144 (6%)
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
+VL KG + + D TV + + +A+HNIG++VV+ P + GI +ERD +R
Sbjct: 5 DVLRNKG----AAVVTINPDATVTELLAGLAEHNIGAMVVVGP---DGLEGIVSERDVVR 57
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMI 179
++ G V++IMT T + + A LMT+ +RHVPV+ +G +VG++
Sbjct: 58 ELHNHGSRVLAWPVSKIMTSVVATCTKSDTVDAISA--LMTENRVRHVPVVENGELVGIV 115
Query: 180 SIVDVVRAVVEQQKGELKRLNEFI 203
SI DVV+ +++ + E +L +I
Sbjct: 116 SIGDVVKTRIDELEAEHAQLQSYI 139
>gi|374576351|ref|ZP_09649447.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374424672|gb|EHR04205.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 142
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + D + AVK + + IG+++V+ Q + GI +ER
Sbjct: 1 MTVRSILNTKGH----QIMSVEPDAKLAVAVKLLGEKKIGAVLVMN---QSRLEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R I +G V+++MT K++T + M++MT RH+PV+D G++
Sbjct: 54 DIVRVIGERGAGALEEPVSQVMT--RKVVTCKETDTVAELMEMMTTGKFRHLPVVDNGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|254419222|ref|ZP_05032946.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
gi|196185399|gb|EDX80375.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
Length = 142
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VAE+L TKG+ + SD TV A + + +G+LVV + GE +AG+F+ERD
Sbjct: 3 VAEILKTKGN----AVFSIASDLTVAQACGELERKRVGALVV-RDGES--VAGVFSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
++ + G + V++ M+ ++I + M MTD+ IRH+PV+ +GR+VG
Sbjct: 56 VKALAVDGPNALGRPVSDYMS--ARVIFAEPGETLSAVMGRMTDRRIRHLPVLSEGRLVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI DVV+ + E + L +I
Sbjct: 114 VISIGDVVKCQIADHAREAESLRTYI 139
>gi|183221687|ref|YP_001839683.1| hypothetical protein LEPBI_I2312 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911762|ref|YP_001963317.1| signal transduction protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776438|gb|ABZ94739.1| Signal transduction protein containing cAMP- binding and CBS
domains [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167780109|gb|ABZ98407.1| Putative CBS domain protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 143
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+SV E+L DK S L D V +A + M +GSL+V G+ + GIFTER
Sbjct: 1 MSVKEIL----KDKASSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGK---LVGIFTER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + ++ ++MT +L + ++ + M K RH+PV+DG +I
Sbjct: 54 DLMRVVAKDHNKLDQIKLKDVMT--TQLTVAGPEEDVDDILNNMITKRFRHMPVLDGDKI 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
+G+ISI D V+ + + + E+ L E++ G +
Sbjct: 112 IGLISIGDAVKTKLNKTQAEMNILREYMYGPH 143
>gi|254476772|ref|ZP_05090158.1| CBS domain protein [Ruegeria sp. R11]
gi|214031015|gb|EEB71850.1| CBS domain protein [Ruegeria sp. R11]
Length = 144
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ T+ +A K + +H IG++VV GE GI +ERD +R++ G S MT
Sbjct: 21 NATISEAAKLLGEHKIGTVVVSSDGETAE--GILSERDIVRELARTGPSCLSDCAKNYMT 78
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
KL+T S +N+ +Q MT+ RH+PV+ +G+++G++S+ DVV+A + + E
Sbjct: 79 --RKLVTCTSQSNVEEVLQQMTEGRFRHMPVVEEGKLIGLVSLGDVVKAQLAEVAMEKDA 136
Query: 199 LNEFIRG 205
L I G
Sbjct: 137 LEGMIMG 143
>gi|334337368|ref|YP_004542520.1| signal transduction protein with CBS domains [Isoptericola
variabilis 225]
gi|334107736|gb|AEG44626.1| putative signal transduction protein with CBS domains [Isoptericola
variabilis 225]
Length = 147
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 9/150 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V + L KGD + + D TV D + +A+H IG++VV G + GI +ER
Sbjct: 1 MRVRDTLRHKGD----AVVTVARDRTVRDLLALLAEHGIGAVVVSDDGAS--VDGIVSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R++ +G V +IMT + + T D + M +MT+ RHVPV+ +GR+
Sbjct: 55 DVVRRLHAEGVGVLDAAVEQIMTRDVQ--TCDPDTMLDDLMHMMTEHRFRHVPVVHEGRL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI DVV+ + + + E +L ++I G
Sbjct: 113 AGIVSIGDVVKRRLAEVQAERDQLTDYITG 142
>gi|94967662|ref|YP_589710.1| signal-transduction protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549712|gb|ABF39636.1| putative signal-transduction protein with CBS domains [Candidatus
Koribacter versatilis Ellin345]
Length = 142
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ D +V +AV M ++N+G++ VL G H+ GIF+ERD + ++V +G P T V +
Sbjct: 19 QHDQSVIEAVHFMVENNVGAVPVLDHG---HLVGIFSERDVMTRVVVRGMDPHSTTVETV 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGEL 196
MT E + + + ++ M LM RH+PV +G R+VG +S+ D++ V+++ E+
Sbjct: 76 MTPEP--LAVAPETSVHDCMVLMKQHKFRHLPVCEGRRLVGFLSLRDLLLYEVDEKDVEV 133
Query: 197 KRLNEFI 203
+ + +I
Sbjct: 134 RMMRAYI 140
>gi|441212766|ref|ZP_20975413.1| inosine-5-monophosphate dehydrogenase [Mycobacterium smegmatis
MKD8]
gi|440626069|gb|ELQ87911.1| inosine-5-monophosphate dehydrogenase [Mycobacterium smegmatis
MKD8]
Length = 143
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + R TV + + +A+ NIG++VV+ + + GI +ERD
Sbjct: 3 IADVLRNKGT----AVVTIRPQATVTELLAGLAEMNIGAMVVVG---DKGLEGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R++ +G S V+ IMT T P D + H LMT +RH+PV+D GR+ G
Sbjct: 56 VRQLHKRGSSLLAQPVSSIMTSVVATCT-PRD-TVDHLNVLMTQNRVRHIPVLDDGRLAG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + E ++L +I
Sbjct: 114 IVSIGDVVKTRMEELETEQQQLQAYI 139
>gi|332284551|ref|YP_004416462.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
gi|330428504|gb|AEC19838.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
Length = 153
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 84/150 (56%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG + D + A++ M++ +IGSLV++ GE +AG+ T R
Sbjct: 2 LKVSEILRVKGH----TLYTATPDTPILQALETMSEQDIGSLVIMDHGE---LAGMLTFR 54
Query: 117 DYLRKI-VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R 174
+ +R + QG + YT V +M D +++ + + +LM +KH R++PV+DG
Sbjct: 55 EIIRHLHRNQGNTGNYT-VRSVMDDAP--VSVSPNTSFEEVQRLMLEKHARYMPVMDGPT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS D+ +A+V Q+ E L +IR
Sbjct: 112 LMGVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|422321780|ref|ZP_16402825.1| hypothetical protein HMPREF0005_02053 [Achromobacter xylosoxidans
C54]
gi|317403319|gb|EFV83833.1| hypothetical protein HMPREF0005_02053 [Achromobacter xylosoxidans
C54]
Length = 152
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V AV+ M++ +IGSLV+++ G + G+ T R
Sbjct: 2 LKVSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFGT---LVGMLTFR 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + G + + T + IM D ++ + A+ +LM +KH R++PV+DG +
Sbjct: 55 EIIRHMHAHGGAGE-TTIRSIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 112 MGVISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|293604639|ref|ZP_06687041.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292816970|gb|EFF76049.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 152
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V AV+ M++ +IGSLV+++ G + G+ T R
Sbjct: 2 LKVSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFGT---LTGMLTFR 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + G + + T + IM D ++ + A+ +LM +KH R++PV+DG +
Sbjct: 55 EIIRHMHAHGGAGE-TTIRSIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 112 MGVISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|84500150|ref|ZP_00998416.1| CBS [Oceanicola batsensis HTCC2597]
gi|84392084|gb|EAQ04352.1| CBS [Oceanicola batsensis HTCC2597]
Length = 142
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
D TV DA + + +H IG+L VL G+ + GI +ERD +R+++ + R P T+V+E+M
Sbjct: 20 PDMTVRDACRILDEHAIGALPVLDGGK---LLGILSERDVIRRVIVRDRDPSATKVSEVM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDV---VRAVVEQQKG 194
T E +T+ + + AM M D RH+PV +VGM+S+ D+ R V E+ +
Sbjct: 77 TPEP--LTISAQGTLATAMGKMLDGGFRHLPVTRANEVVGMLSMRDIPPEYRLVAERYRD 134
Query: 195 ELKRLNE 201
+ +R E
Sbjct: 135 QAEREAE 141
>gi|442770277|gb|AGC70997.1| CBS domain protein [uncultured bacterium A1Q1_fos_2107]
Length = 145
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG D + R + T+E+AV + IG+LVV G + + GI +ER
Sbjct: 1 MQVSDILRHKGTD----VITVRPETTIENAVGVLGTRRIGALVVSDDG--RTVDGIVSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D + + GR+ + VA +MT + + T P DA + M +MT RH+PV+ DG +
Sbjct: 55 DVVAHLAAVGRTGLNSTVATVMTRDVRTCT-PGDA-LEDVMAIMTAGRFRHLPVVADGEL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
G++SI D V V + + E R++++I+
Sbjct: 113 AGIVSIGDAVERRVSELETESARMHDYIQ 141
>gi|408792740|ref|ZP_11204350.1| CBS domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464150|gb|EKJ87875.1| CBS domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 143
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 69 DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
DK S L D V +A + M +GSL+V G+ + GIFTERD +R + +
Sbjct: 9 DKASSVLSIEEDRNVLEATQMMVGAKVGSLIVTFQGK---LVGIFTERDLMRVVAKDHAN 65
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRA 187
++ ++MT +L D ++ + M K RH+PV+DG +I+G+ISI D V+
Sbjct: 66 LDKIKLKDVMT--TQLTVAGPDEDVDDILNNMITKRFRHMPVLDGDKIIGLISIGDAVKT 123
Query: 188 VVEQQKGELKRLNEFIRGEY 207
+ + + E+ L E++ G +
Sbjct: 124 KLTRTQAEMSILREYMYGPH 143
>gi|116252280|ref|YP_768118.1| hypothetical protein RL2534 [Rhizobium leguminosarum bv. viciae
3841]
gi|241204773|ref|YP_002975869.1| signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|115256928|emb|CAK08022.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
gi|240858663|gb|ACS56330.1| putative signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 144
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D V + + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRDVVTAG----PNTTVAEAAAILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ +A++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKHGKEGLDHSLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|393776763|ref|ZP_10365057.1| hypothetical protein MW7_1738 [Ralstonia sp. PBA]
gi|392716120|gb|EIZ03700.1| hypothetical protein MW7_1738 [Ralstonia sp. PBA]
Length = 149
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + AV MA+++IGSLV+++ GE + G+ T R
Sbjct: 1 MKVSDILHIKGN----TLYTANPDTPLLYAVNTMAENDIGSLVIMEYGE---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ + + + ++M D T +D N ++M ++H R++PV+D R +
Sbjct: 54 EIIKTVSANQGNVGTISIRKVMDDHPLTCTPETDVN--EVRRMMLERHTRYLPVLDSRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVEDQSFENRMLKAYIR 140
>gi|389872507|ref|YP_006379926.1| hypothetical protein TKWG_14420 [Advenella kashmirensis WT001]
gi|388537756|gb|AFK62944.1| hypothetical protein TKWG_14420 [Advenella kashmirensis WT001]
Length = 151
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ ++EVL KG+ D +V A+ M++ +IGSLV++ EQ + G+ T R
Sbjct: 1 MKISEVLRVKGN----ILYTATPDQSVAQAIATMSERDIGSLVIM---EQGQLTGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ +R + + + T + +IM D ++ ++A +LM + H R+VPV+DG ++
Sbjct: 54 EIIRHMHDSPDAFENTTIRKIMDDAPVSVSPNTEAE--EVRRLMLEHHARYVPVMDGPVL 111
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS D+ RA++E K E K L +IR
Sbjct: 112 MGVISFYDMARAMLEASKFENKMLKAYIR 140
>gi|374857450|dbj|BAL60302.1| inosine monophosphate dehydrogenase [uncultured crenarchaeote]
Length = 159
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
Query: 86 AVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLI 145
A M + GSLVV+ G+ GI TERD +R++V +GRSP T+V +IM+ LI
Sbjct: 35 AANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS--TPLI 89
Query: 146 TLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQK 193
++ +A + A+++M + IR +PV++ RIV M+++ D+ RA+ +++
Sbjct: 90 SVGPEATVAAAVRIMYENGIRRLPVVENDRIVVMLTVTDLARAMYRERE 138
>gi|423016783|ref|ZP_17007504.1| CBS domain pair family protein 1 [Achromobacter xylosoxidans AXX-A]
gi|338780211|gb|EGP44626.1| CBS domain pair family protein 1 [Achromobacter xylosoxidans AXX-A]
Length = 151
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V AV+ M++ +IGSLV+++ G + G+ T R
Sbjct: 1 MKVSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFGT---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + G + + T + IM D ++ + A+ +LM +KH R++PV+DG +
Sbjct: 54 EIIRHMHAHGGAGE-TTIRSIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPTL 110
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 111 MGVISFYDMAQAIVAAQQFENNMLKAYIR 139
>gi|347524337|ref|YP_004781907.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343461219|gb|AEM39655.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 152
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D+ V +A + M Q+ IGS+VV+ ++ + GI TERD + ++V + R P T V
Sbjct: 18 VTITPDEPVIEAARKMKQYEIGSVVVV--SQRGEVIGIITERDLVTRVVAENRDPLKTTV 75
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
E+MT IT+ D + A +LM+++ + H+PV+D GR+VG+I+ D++
Sbjct: 76 REVMTPNP--ITVYDDTPLEIAARLMSERGVGHLPVVDKAGRLVGIIAKSDLI 126
>gi|409407090|ref|ZP_11255541.1| CBS domain-containing protein [Herbaspirillum sp. GW103]
gi|386432841|gb|EIJ45667.1| CBS domain-containing protein [Herbaspirillum sp. GW103]
Length = 153
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ D +++AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSEILKVKGN----ILFTVTPDTPIQEAVAAMAEKDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ L + G + V + M D IT+ D ++ ++M +KH R+VPV++ R +
Sbjct: 54 EVLLTLHKNGGELGGSTVRKHMNDAP--ITVTPDTDLNEVRRIMLEKHARYVPVMEARTV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AV++ Q E K L +IR
Sbjct: 112 LGVMSFYDVAKAVLDAQGFENKMLKAYIR 140
>gi|412990082|emb|CCO20724.1| predicted protein [Bathycoccus prasinos]
Length = 147
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD-------ENKLITLPSDANILHAMQLMT 161
IAGI +ERDYLR V + T V EIMT E +LI++ ++L AMQ MT
Sbjct: 39 IAGIVSERDYLRA-VATNKVTDLTTVREIMTPAEDESTGEKRLISVEPYCSVLAAMQAMT 97
Query: 162 DKHIRHVPVIDGR---IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
H RH+PVI+ + G++S+ DVV+A++ +Q E+ L ++I
Sbjct: 98 SGHFRHIPVINTESQTLEGIVSLGDVVKALIAEQDEEIDVLEDYI 142
>gi|399021692|ref|ZP_10723784.1| CBS domain-containing protein [Herbaspirillum sp. CF444]
gi|398090698|gb|EJL81162.1| CBS domain-containing protein [Herbaspirillum sp. CF444]
Length = 149
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ D + +AV MA+ +IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSEILKVKGN----ILFTVTPDTPITEAVVAMAEKDIGSLVVMEFGE---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ L+ + S V + M D IT+ D ++ ++M +KH R+VPV+D + +
Sbjct: 54 EVLKTLQENNGSVGPNTVRKHMDDHP--ITVTPDTDLNEVRRIMLEKHARYVPVMDAKTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AV++ Q E K L +IR
Sbjct: 112 LGVMSFYDVAKAVLDAQGFENKMLKAYIR 140
>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
Length = 147
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
CC TV++A M ++ G + V+ + + G+ T+RD + V +G+S RV
Sbjct: 13 CCSPSSTVQEAASLMVDNDCGEIPVVD--DSGALVGVVTDRDIACRCVAKGKSSDQ-RVE 69
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQK 193
E+MT + +T+ +DA++ M D +R +PV+D G+ G+++ D+ R+ E++
Sbjct: 70 EVMT--SSPVTVTADASVDECCTKMEDNQVRRLPVVDDKGKCCGIVAQADIARSAAEKET 127
Query: 194 GELKR 198
G+L R
Sbjct: 128 GDLVR 132
>gi|359798884|ref|ZP_09301453.1| hypothetical protein KYC_18105 [Achromobacter arsenitoxydans SY8]
gi|359363022|gb|EHK64750.1| hypothetical protein KYC_18105 [Achromobacter arsenitoxydans SY8]
Length = 151
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V AV+ M++ +IGSLV+++ G + G+ T R
Sbjct: 1 MKVSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFGT---LTGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + G + + T + IM D ++ + A+ +LM +KH R++PV+DG +
Sbjct: 54 EIIRHMHAHGGAGE-TTIRSIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPTL 110
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 111 MGVISFYDMAQAIVAAQQFENNMLKAYIR 139
>gi|421482940|ref|ZP_15930519.1| hypothetical protein QWC_10034 [Achromobacter piechaudii HLE]
gi|400198744|gb|EJO31701.1| hypothetical protein QWC_10034 [Achromobacter piechaudii HLE]
Length = 151
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V AV+ M++ +IGSLV+++ G + G+ T R
Sbjct: 1 MKVSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFGT---LTGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + G + + T + IM D ++ + A+ +LM +KH R++PV+DG +
Sbjct: 54 EIIRHMHAHGGAGE-TTIRSIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPTL 110
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 111 MGVISFYDMAQAIVAAQQFENNMLKAYIR 139
>gi|384217897|ref|YP_005609063.1| hypothetical protein BJ6T_42020 [Bradyrhizobium japonicum USDA 6]
gi|354956796|dbj|BAL09475.1| hypothetical protein BJ6T_42020 [Bradyrhizobium japonicum USDA 6]
Length = 142
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + D + AVK + + IG+++V+ Q + GI +ER
Sbjct: 1 MTVRSILNTKGH----QIMSVEPDAKLAAAVKLLGEKKIGAVLVMN---QSRLEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R I +G V ++MT K++T + M+ MT RH+PV+DG ++
Sbjct: 54 DIVRVIGERGAGALEEPVTQVMT--RKVVTCKETDTVAELMETMTTGKFRHLPVVDGGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKRRVQEYEAEQEALRDYIK 140
>gi|222874377|gb|EEF11508.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+++ AV+ M++ +IGSLVV++ G+ + G+ T R
Sbjct: 33 MKVSDILRVKGN----TLYTVSPDESLASAVQVMSERDIGSLVVMEHGD---VVGMLTFR 85
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ V G + T V M D T+ +D + + M M D+H R++PV+D R +
Sbjct: 86 EVIQGFVKHGGVGE-TLVRSAMDDAPMTCTMETDMDEVRRM--MLDRHARYMPVMDKRML 142
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS+ DV +AVV+ Q E + L +IR
Sbjct: 143 MGVISLYDVAKAVVDSQNFENRMLKAYIR 171
>gi|300312600|ref|YP_003776692.1| hypothetical protein Hsero_3303 [Herbaspirillum seropedicae SmR1]
gi|124483446|emb|CAM32596.1| FOG: CBS domain containing protein [Herbaspirillum seropedicae]
gi|300075385|gb|ADJ64784.1| CBS domain containing protein [Herbaspirillum seropedicae SmR1]
Length = 153
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ D +++AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSEILKVKGN----ILFTVTPDTPIQEAVAAMAEKDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ L + G + V + M D IT+ D ++ ++M +KH R+VPV++ R +
Sbjct: 54 EVLLTLHKNGGELGGSTVRKHMNDAP--ITVTPDTDLNEVRRIMLEKHARYVPVMEARTV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AV++ Q E K L +IR
Sbjct: 112 LGVMSFYDVAKAVLDAQGFENKMLKAYIR 140
>gi|433648777|ref|YP_007293779.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
gi|433298554|gb|AGB24374.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
Length = 143
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + +V + + HNIG++VV+ Q + GI +ERD
Sbjct: 3 IADVLRNKG----AAVATITPETSVAGLLTELTVHNIGAMVVMS---QDGLVGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+RK+ G + V+EIMT + T + ++ LMT+ +RHVPV+ +GR+ G
Sbjct: 56 VRKLHELGTEILHRPVSEIMT--TVVATCSPEDSVDSLSALMTENRVRHVPVVVNGRLAG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + E K L +I
Sbjct: 114 IVSIGDVVKTRMEELEAEQKHLQAYI 139
>gi|416978034|ref|ZP_11937767.1| putative signal-transduction protein [Burkholderia sp. TJI49]
gi|325520023|gb|EGC99252.1| putative signal-transduction protein [Burkholderia sp. TJI49]
Length = 151
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + ++ G + +V ++M DE T +D N ++M ++H R++PV+D +++
Sbjct: 54 EVILRLHENGGAIGDVQVRKVM-DEPLTCTPETDVN--EVRRMMLERHARYMPVLDKKVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|299135308|ref|ZP_07028499.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298590285|gb|EFI50489.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 142
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + + +D + DA++ + + ++G+++V+K HI GI +ER
Sbjct: 1 MTVQAILGTKGFEVI----SIEADAKLSDAIRVLTERHVGAVLVMK---DHHIEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + G S V+E+MT K++T M+ MT+ RH+PV++ R+
Sbjct: 54 DVVRVLGKHGASVLAMPVSEVMT--RKVVTCRRADTAASIMEKMTNGKFRHLPVVENERV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKWRVKEYEREQEALRDYIK 140
>gi|386333304|ref|YP_006029473.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
solanacearum Po82]
gi|334195752|gb|AEG68937.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
solanacearum Po82]
Length = 617
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 11/151 (7%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
N+ V+++L KG+ + + ++ AV+ MA+++IGSLVV++ GE + G+ T
Sbjct: 466 NMKVSDILHVKGN----TLYTVAPETKLQVAVQTMAEYDIGSLVVMEYGE---LVGMLTF 518
Query: 116 RDYLRKIV-GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR 174
R+ + + G+ T + ++M D T ++ N + M M ++H R++PV+D R
Sbjct: 519 REIILVLARNNGKVDDGTTIRKVMDDHPLTCTPETEVNEVRRM--MLERHARYLPVLDNR 576
Query: 175 -IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV +AV E+Q E K L +IR
Sbjct: 577 TLMGVISFYDVAKAVFEEQNFENKMLKAYIR 607
>gi|424870768|ref|ZP_18294430.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393166469|gb|EJC66516.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 144
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRD----VITAAPSTTVAEAAAILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ +A++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKHGKEGLDQPLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|336325914|ref|YP_004605880.1| hypothetical protein CRES_1361 [Corynebacterium resistens DSM
45100]
gi|336101896|gb|AEI09716.1| hypothetical protein CRES_1361 [Corynebacterium resistens DSM
45100]
Length = 617
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
S +V+DA K M + SL+++ + + GI T+RD +RK+V +P T VAEIM
Sbjct: 167 STTSVQDAAKMMNDLRVSSLLII---DNDKLVGIVTDRD-MRKVVANN-TPVSTTVAEIM 221
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
KL+T SD ++ AM LM ++ I H+PV+ DGR+ G+++ D++R
Sbjct: 222 P--KKLVTRSSDTVVIEAMVLMAERDIHHLPVVDDGRVTGIVTAADIMR 268
>gi|325963518|ref|YP_004241424.1| hypothetical protein Asphe3_21370 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469605|gb|ADX73290.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 138
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
G C ++T+E A + M N+G+L + GE + G+ T+RD + K +G P+
Sbjct: 9 TGGVECIGENETLEAAARKMKDLNVGALPIC--GEDNRLKGMITDRDIVIKCFAEGGDPR 66
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVV 189
+ + + K +T+ +D +I A++ M + +R +PVIDG +VG+++ D+ R
Sbjct: 67 TAKAGDF--GQGKPVTIGADDSIEEAIRTMEEHQVRRLPVIDGHDLVGILTQADIARNYP 124
Query: 190 EQQKGELKRLNEF 202
E + GEL L F
Sbjct: 125 EDRVGELVELISF 137
>gi|160900391|ref|YP_001565973.1| hypothetical protein Daci_4959 [Delftia acidovorans SPH-1]
gi|333913535|ref|YP_004487267.1| CBS domain-containing protein [Delftia sp. Cs1-4]
gi|160365975|gb|ABX37588.1| CBS domain containing protein [Delftia acidovorans SPH-1]
gi|333743735|gb|AEF88912.1| CBS domain containing protein [Delftia sp. Cs1-4]
Length = 150
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+++ AV+ M++ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTVSPDESLASAVQVMSERDIGSLVVMEHGD---VVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ V G + T V M D T+ +D + + M L D+H R++PV+D R +
Sbjct: 54 EVIQGFVKHGGVGE-TLVRSAMDDAPMTCTMETDMDEVRRMML--DRHARYMPVMDKRML 110
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS+ DV +AVV+ Q E + L +IR
Sbjct: 111 MGVISLYDVAKAVVDSQNFENRMLKAYIR 139
>gi|395646605|ref|ZP_10434465.1| putative signal transduction protein with CBS domains
[Methanofollis liminatans DSM 4140]
gi|395443345|gb|EJG08102.1| putative signal transduction protein with CBS domains
[Methanofollis liminatans DSM 4140]
Length = 140
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 18/138 (13%)
Query: 76 CCRS-------DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128
CC++ + V D MA+ N+GS+VV+ E + GI T+RD ++ GR
Sbjct: 6 CCQAPVVSVPPETPVYDVAGIMAEQNVGSVVVV---EDKKPVGIVTDRDITVRVTAAGRD 62
Query: 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVR 186
PK V +MT + L+TLP + A++ + K +R VPV D G +VG+I++ DV+R
Sbjct: 63 PKGIPVRAVMTAD--LLTLPDSTGLYEALEAIRKKGVRRVPVTDEGGSLVGIITVDDVIR 120
Query: 187 AVVEQQKGELKRLNEFIR 204
+ E++R+ I+
Sbjct: 121 LLAV----EMERIAAVIK 134
>gi|375141344|ref|YP_005001993.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
gi|359821965|gb|AEV74778.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
Length = 142
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG S + +V + ++ HNIG++VV+ P + GI +ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + +G V+EIMT T + L A LMT K +RH+PV+ +GR+ G
Sbjct: 56 VRALQTRGAELLRMPVSEIMTTFVATCTPNDTVDSLSA--LMTTKRVRHIPVMENGRLTG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + + ++L +I
Sbjct: 114 IVSIGDVVKTRMEELEAQQEQLQAYI 139
>gi|319943750|ref|ZP_08018031.1| CBS domain protein [Lautropia mirabilis ATCC 51599]
gi|319742983|gb|EFV95389.1| CBS domain protein [Lautropia mirabilis ATCC 51599]
Length = 168
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 18/155 (11%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VA++L KG + D + DAV M +H+IGS+ V++ G+ + G+ T R+
Sbjct: 9 VADILSLKG----TTLFTVNPDMMLSDAVLTMDEHDIGSVAVMENGK---LVGMLTFREV 61
Query: 119 LRKIV--------GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV 170
+R + G R RV+++M + ++T ++ N L ++M + H R+VPV
Sbjct: 62 VRMLARRQLERRSGPTRPVAEIRVSDVMVSDPVVVTPSTEVNELR--RVMVESHARYVPV 119
Query: 171 I-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+ DG ++G++S DV R+V+E Q E + L +IR
Sbjct: 120 MDDGVLLGILSFHDVARSVLEAQSFENRMLKAYIR 154
>gi|85375415|ref|YP_459477.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
gi|84788498|gb|ABC64680.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
Length = 143
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ C + V +A+ +A IG++ V++ G IAGIF+ERD + ++ +G S V
Sbjct: 16 ITCDAHQPVREAIALLASKRIGAVPVMENGS---IAGIFSERDVIYRMAEEGTSCLDKLV 72
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQK 193
++MT IT+ + A+ LMT + IRH+PV D G G +SI D+V++ +++ +
Sbjct: 73 GQVMT--APAITVEKSTKVDEALALMTKRRIRHLPVTDNGAFAGFVSIGDLVKSRIDEVE 130
Query: 194 GELKRLNEFIR 204
E + + ++I+
Sbjct: 131 NEAQAMRDYIQ 141
>gi|86357820|ref|YP_469712.1| inosine-5`-monophosphate dehydrogenase [Rhizobium etli CFN 42]
gi|86281922|gb|ABC90985.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
etli CFN 42]
Length = 144
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D + + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRD----VITAGPNTTVAEAAAILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I +G+ ++++MT +K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKRGKESLDQPLSQVMT--SKVYRCHEETTVNELMELMTSRRFRHVPVESNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|398828308|ref|ZP_10586509.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
gi|398218343|gb|EJN04853.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Phyllobacterium sp.
YR531]
Length = 143
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D T+ DA+ +A++ IG++VV + + I GI +ERD +R I G + ++EIMT
Sbjct: 20 DMTLADAITVLAKYKIGAIVVCD--DNKAIKGILSERDVVRAIAADGADALWKPISEIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRAVVEQQKGELKR 198
+ K+ T + I M+ MT RH+PV DGR+ G++SI DVV+ +E+ + E +
Sbjct: 78 IKVKVCT--ENHTINQVMETMTQGRFRHLPVEKDGRLHGIVSIGDVVKLRIEEVERESQE 135
Query: 199 LNEFI 203
+ +I
Sbjct: 136 IRSYI 140
>gi|332797972|ref|YP_004459472.1| paired CBS domain-containing protein [Acidianus hospitalis W1]
gi|332695707|gb|AEE95174.1| paired CBS domain protein [Acidianus hospitalis W1]
Length = 164
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 15/129 (11%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ---GRSPKYTRVAEIM 138
T+ +A K M +HN+GSLVV+ Q + GI TERD +R + + G KY M
Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERDVVRAVSNRDIDGPVEKY------M 72
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGEL 196
T + K +T D ++ A+ +M + RH+P+I DG++ G++SI D+ RA+++ +
Sbjct: 73 TKDVKGVT--EDTSVTDALDVMLNNGFRHLPIIKSDGKLYGIVSIRDLARALLDVHTMQF 130
Query: 197 KRLNEFIRG 205
+ E ++G
Sbjct: 131 GKPAEEVKG 139
>gi|116753622|ref|YP_842740.1| signal-transduction protein [Methanosaeta thermophila PT]
gi|116665073|gb|ABK14100.1| putative signal-transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 185
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L +D V DA M N+GSL+V++ + GI TERD ++K+V + P+ +RV
Sbjct: 16 LTVDADTDVLDAANRMISANVGSLIVVQGAKP---IGIITERDLVKKVVARAEDPRKSRV 72
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVV 185
++M + LI + DA++ A +LM ++ +PVI DG++VG+I+ D+V
Sbjct: 73 GDVMN--SPLIKIHPDASLRDAAELMLKSGVKRLPVISDDGKLVGIITDTDLV 123
>gi|311105399|ref|YP_003978252.1| hypothetical protein AXYL_02214 [Achromobacter xylosoxidans A8]
gi|310760088|gb|ADP15537.1| CBS domain pair family protein 1 [Achromobacter xylosoxidans A8]
Length = 152
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V AV+ M++ +IGSLV+++ G + G+ T R
Sbjct: 2 LKVSEILRVKGD----TLYTASPDMPVSQAVQTMSEQDIGSLVIMEFGT---LTGMLTFR 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + G + T + IM D ++ + A+ +LM +KH R++PV+DG +
Sbjct: 55 EIIRHMHAHGGAGD-TTIRSIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 112 MGVISFYDMAQAIVAAQQFENNMLKAYIR 140
>gi|171058207|ref|YP_001790556.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170775652|gb|ACB33791.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 157
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG + + + + AV+ M+ ++IGSLVV+ G+ + G+ T R
Sbjct: 1 MKVSDILRVKG----STLFTVQPQEALAVAVQTMSDNDIGSLVVMHHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + +V G + + V +M D++ L P+ I ++M ++H R++PV+DGR +
Sbjct: 54 EVIAAVVKNGGTVGQSTVRGVM-DDHPLTCTPA-TEIDEVRRMMLERHARYMPVVDGRTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E + L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQDFENRMLKAYIR 140
>gi|421109480|ref|ZP_15569999.1| CBS domain protein [Leptospira kirschneri str. H2]
gi|410005425|gb|EKO59217.1| CBS domain protein [Leptospira kirschneri str. H2]
Length = 123
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
D VK M +++IGS+++L G+ + GIFTERD L G V+E+MT +
Sbjct: 2 DVVKFMTKYDIGSVIILGEGK---LKGIFTERDVLHLSAELGLDLFKKSVSEVMT--TSI 56
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVIDGRI-VGMISIVDVVRAVVEQQKGELKRLNEFI 203
T+ + ++ + +M K IRH+P+++ I +G+ISI D V+A +E+ + E K L +++
Sbjct: 57 TTMTPEDDVDELLSIMLKKRIRHMPILENDILIGIISIGDAVKAKIEKTEEENKNLKQYM 116
Query: 204 RGE 206
E
Sbjct: 117 YSE 119
>gi|209549446|ref|YP_002281363.1| signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424913863|ref|ZP_18337227.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|209535202|gb|ACI55137.1| putative signal transduction protein with CBS domains [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850039|gb|EJB02560.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 144
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRD----VFTAGPNTTVAEAAVILSKKRIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ +A++MT K+ + + M+LMT + RHVPV +G++V
Sbjct: 58 LVHAIAKHGKDGLDQTLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVEHNGKLV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|451943821|ref|YP_007464457.1| hypothetical protein A605_05445 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451903208|gb|AGF72095.1| hypothetical protein A605_05445 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 137
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++ A +MT G + C +DT+E A + M + ++GSL + GE + G+ T+R
Sbjct: 1 MTTAREIMTPGAE------CIGENDTLEIAARKMRELDVGSLPIC--GEDNRLKGMLTDR 52
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
D + K + G PK + E K +T+ +D ++ A++ M + +R +PVID +
Sbjct: 53 DIVVKCLADGHDPKTATAGSLA--EGKPVTIGADDSVDEALRTMKEHKLRRLPVIDDHDL 110
Query: 176 VGMISIVDVVRAVVEQQKGEL 196
VGM++ DV R++ E + G+L
Sbjct: 111 VGMLAQADVARSLPEDRVGDL 131
>gi|115351392|ref|YP_773231.1| XRE family transcriptional regulator [Burkholderia ambifaria AMMD]
gi|170703575|ref|ZP_02894324.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171322386|ref|ZP_02911205.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|172060431|ref|YP_001808083.1| hypothetical protein BamMC406_1379 [Burkholderia ambifaria MC40-6]
gi|115281380|gb|ABI86897.1| putative transcriptional regulator, XRE family [Burkholderia
ambifaria AMMD]
gi|170131518|gb|EDT00097.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171092288|gb|EDT37662.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|171992948|gb|ACB63867.1| CBS domain containing protein [Burkholderia ambifaria MC40-6]
Length = 151
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + ++ G + +V ++M DE T +D N ++M ++H R++PV+D +++
Sbjct: 54 EIILRLHVNGGAIGDVQVRKVM-DEPLTCTPETDVN--EVRRMMLERHARYMPVLDKKVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|332158424|ref|YP_004423703.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. NA2]
gi|331033887|gb|AEC51699.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. NA2]
Length = 178
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ R +DTV + ++++ +GS VV+ E+ I GI TERD L K+V +G+ PK +V
Sbjct: 16 IVVRPNDTVHKVARILSKNKVGSAVVM---EKDEILGIVTERDILDKVVAKGKDPKEVKV 72
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQ 192
EIMT + + D ++ A+++MT+K +R + V G+ +G ++ D++ A+ Q
Sbjct: 73 EEIMT--RNPVKIEYDYDVQDAIEVMTEKGVRRILVTKFGKPIGFVTATDLLAALASQN 129
>gi|27380662|ref|NP_772191.1| hypothetical protein bll5551 [Bradyrhizobium japonicum USDA 110]
gi|27353827|dbj|BAC50816.1| bll5551 [Bradyrhizobium japonicum USDA 110]
Length = 142
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + D + A+K + + IG+++V+ Q + GI +ER
Sbjct: 1 MTVRSILNTKGH----QIMSVEPDAKLAAAIKLLGEKKIGAVLVMN---QSRLEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R I +G V+++MT K++T + M+ MT RH+PVID G++
Sbjct: 54 DIVRVIGERGAGALDEPVSQVMT--RKVVTCKETDTVAELMETMTTGKFRHLPVIDNGKV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKRRVQEYESEQEALRDYIK 140
>gi|71906496|ref|YP_284083.1| CBS [Dechloromonas aromatica RCB]
gi|71846117|gb|AAZ45613.1| CBS protein [Dechloromonas aromatica RCB]
Length = 149
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V E+L KG G+ + A+ +MA ++GSLVV++ G+ + G+ T R
Sbjct: 1 MQVREILRVKG----GTLYTVTPQQPLAVAIDSMADLDVGSLVVMEAGK---MVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS-DANILHAMQLMTDKHIRHVPVIDG-R 174
+ L + SP V ++M N + P +AN L +LM +K R++PVIDG
Sbjct: 54 EVLLALRQHASSPDGITVGDVMV-ANPVTAFPDMEANDLR--RLMIEKRSRYLPVIDGDT 110
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS +DV +AV+E+Q E K L +I+
Sbjct: 111 LMGVISFLDVAKAVLEEQSFENKMLKSYIK 140
>gi|392380710|ref|YP_005029906.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
gi|356875674|emb|CCC96422.1| conserved protein of unknown function; CBS domain [Azospirillum
brasilense Sp245]
Length = 142
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K + D +V K MA+ NIG+++V+ G+ + GI TERD K++
Sbjct: 11 KSQELILVTEDTSVLTVSKLMAEKNIGAVLVVNHGD---LVGIVTERDLNNKVLSTQIDA 67
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAV 188
T V+ IMT TLP DA+ + A+ LM KH RH+P+ G R VG++SI D+ +
Sbjct: 68 FETEVSAIMTRNPD--TLPPDADAIEALTLMQSKHYRHLPITQGKRAVGIVSIRDLFKLA 125
Query: 189 VEQQKGELKRLNEFIR 204
E E++ + +R
Sbjct: 126 YEHLVEEVEFRDSLMR 141
>gi|68445529|dbj|BAE03238.1| inosine monophosphate dehydrogenase [unclutured Candidatus
Nitrosocaldus sp.]
Length = 191
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
Query: 86 AVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLI 145
A M + GSLVV+ G+ GI TERD +R++V +GRSP T+V +IM+ LI
Sbjct: 67 AANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS--TPLI 121
Query: 146 TLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQK 193
++ +A + A+++M + IR +PV++ RIV M+++ D+ RA+ +++
Sbjct: 122 SVGPEATVAAAVRIMYENGIRRLPVVENDRIVVMLTVTDLARAMYRERE 170
>gi|254487602|ref|ZP_05100807.1| CBS domain protein [Roseobacter sp. GAI101]
gi|214044471|gb|EEB85109.1| CBS domain protein [Roseobacter sp. GAI101]
Length = 144
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L TK DD V + + + +A K +++ IG+LV+ G+ GI +ERD
Sbjct: 3 VSQILKTKADDSVTT---VKPGVLISEAAKMLSEKRIGTLVICSDGKTPD--GILSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + QG + V +MT E L+T +DA + MT+ RH+PV+ DG +VG
Sbjct: 58 VRALGVQGDACLNMTVESLMTKE--LVTCGTDARSDEILTKMTEGRFRHMPVLADGALVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+IS+ DVV+A + + E L I G
Sbjct: 116 LISLGDVVKAQLMELSMEKDALQGMIMG 143
>gi|319762620|ref|YP_004126557.1| CBS domain-containing protein [Alicycliphilus denitrificans BC]
gi|330824710|ref|YP_004388013.1| hypothetical protein Alide2_2125 [Alicycliphilus denitrificans
K601]
gi|317117181|gb|ADU99669.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
gi|329310082|gb|AEB84497.1| CBS domain containing protein [Alicycliphilus denitrificans K601]
Length = 151
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV+ MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRLKGN----TLYTVHPDEPLACAVQTMAERDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ +V G S V M D TL +D + ++M +H R++PV+D R +
Sbjct: 54 EVIQVLVKNGGSVGTMLVRSAMDDAPLTCTLETDMD--EVRRMMLGQHARYMPVMDKRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AVV+ Q E K L +IR
Sbjct: 112 MGVVSFYDVAKAVVDSQNFENKLLKAYIR 140
>gi|78066074|ref|YP_368843.1| XRE family transcriptional regulator [Burkholderia sp. 383]
gi|107022531|ref|YP_620858.1| XRE family transcriptional regulator [Burkholderia cenocepacia AU
1054]
gi|116689480|ref|YP_835103.1| XRE family transcriptional regulator [Burkholderia cenocepacia
HI2424]
gi|170732786|ref|YP_001764733.1| hypothetical protein Bcenmc03_1436 [Burkholderia cenocepacia MC0-3]
gi|206559832|ref|YP_002230596.1| hypothetical protein BCAL1465 [Burkholderia cenocepacia J2315]
gi|402566740|ref|YP_006616085.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|421869111|ref|ZP_16300751.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|444362871|ref|ZP_21163363.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444373388|ref|ZP_21172755.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|77966819|gb|ABB08199.1| putative transcriptional regulator, XRE family [Burkholderia sp.
383]
gi|105892720|gb|ABF75885.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia AU 1054]
gi|116647569|gb|ABK08210.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia HI2424]
gi|169816028|gb|ACA90611.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
gi|198035873|emb|CAR51764.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358070860|emb|CCE51629.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|402247937|gb|AFQ48391.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|443591814|gb|ELT60675.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|443596048|gb|ELT64581.1| CBS domain protein [Burkholderia cenocepacia BC7]
Length = 151
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+H+IGSLVV++ G+ + G+ T R
Sbjct: 1 MRVSDILKVKGN----TLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + ++ G + +V ++M DE T +D N ++M ++H R++PV+D +++
Sbjct: 54 EIILRLHVNGGAIGDVQVRKVM-DEPLTCTPETDVN--EVRRMMLERHARYMPVLDKKVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|288931695|ref|YP_003435755.1| signal transduction protein with CBS domains [Ferroglobus placidus
DSM 10642]
gi|288893943|gb|ADC65480.1| putative signal transduction protein with CBS domains [Ferroglobus
placidus DSM 10642]
Length = 175
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R D++V A + M + +GS+VV++ G GI TE D +RK+V + + P ++ EI
Sbjct: 19 RKDESVLKASRRMIEFGVGSIVVVENGRP---VGIVTESDIIRKVVARNKVPSEVKLEEI 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVV 185
MT +IT+ A+I A +M K IR +PV+DG ++VG+++ D++
Sbjct: 76 MT--YPIITIKPTASIREAANIMLKKGIRRLPVVDGEKLVGIVTDTDIL 122
>gi|163857355|ref|YP_001631653.1| hypothetical protein Bpet3043 [Bordetella petrii DSM 12804]
gi|163261083|emb|CAP43385.1| conserved hypothetical protein [Bordetella petrii]
Length = 152
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KGD + D V AV+ M++ +IGSLV+++ G +AG+ T R
Sbjct: 2 LKVSEILRVKGD----TLYTASPDMPVAMAVQTMSEQDIGSLVIMESG---MLAGMLTFR 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
+ +R + T + IM D ++ + A+ +LM +KH R++PV+DG +
Sbjct: 55 EIIRHLHDHDGQLGQTTIRAIMDDAPVSVSPNTSAD--EVQRLMLEKHARYIPVMDGPTL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS D+ +A+V Q+ E L +IR
Sbjct: 113 MGVISFYDMAQAIVAAQQFENNMLKAYIR 141
>gi|331695746|ref|YP_004331985.1| signal transduction protein [Pseudonocardia dioxanivorans CB1190]
gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
[Pseudonocardia dioxanivorans CB1190]
Length = 144
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 16/147 (10%)
Query: 57 ISVAEVLMTKGDD--KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFT 114
+++A+VL TKG V W TV +AV+ + ++ IG+L+V GE + I GI +
Sbjct: 1 MNIADVLDTKGRTVHSVVPWA------TVAEAVERLEKYRIGALLV-SDGENR-IRGIVS 52
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-G 173
ERD +R++ +G V +IMT + T+ S ++ +AM MT RH+PV+D G
Sbjct: 53 ERDVIRELARRGNRLLSCNVEDIMT--RNVATVSSTESLTYAMAQMTRGRYRHLPVVDGG 110
Query: 174 RIVGMISIVDVVRAVV---EQQKGELK 197
R+VGM+SI D+V V E Q G L+
Sbjct: 111 RLVGMVSIGDLVNHRVREMELQTGVLR 137
>gi|374853591|dbj|BAL56495.1| hypothetical conserved protein [uncultured alpha proteobacterium]
Length = 152
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV A + M +H GS+VV+ + GIFTERD R++V G P T ++ +MT E
Sbjct: 30 TVRRAAELMTEHACGSVVVVD--AAGRVVGIFTERDLTRRVVAAGLDPDTTPLSAVMTPE 87
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGEL 196
T+ +DA + A++ M + +H+PV+DG R++G+++ D+ A + Q EL
Sbjct: 88 PD--TIAADAPVADAIRHMDECGYKHLPVLDGERLIGVVAPEDIPFAEIAQLADEL 141
>gi|300784312|ref|YP_003764603.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384147578|ref|YP_005530394.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399536197|ref|YP_006548859.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299793826|gb|ADJ44201.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340525732|gb|AEK40937.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398316967|gb|AFO75914.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 143
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 11/130 (8%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A++L KG + + TV + +A HN+G++VV+ P IAGI +ERD
Sbjct: 3 IADLLRKKG----SAVATVTPETTVTALLAGLADHNVGAMVVVAP--DGSIAGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLI-TLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
+R++ G + V+EIMT KL+ + D ++ LMT++ IRHVPV+ DGR+
Sbjct: 57 VRRLNEHGPALLDGPVSEIMT---KLVASCSPDDSVDQLSVLMTERRIRHVPVLADGRLA 113
Query: 177 GMISIVDVVR 186
G++SI DVV+
Sbjct: 114 GIVSIGDVVK 123
>gi|188581471|ref|YP_001924916.1| signal-transduction protein with CBS domains [Methylobacterium
populi BJ001]
gi|179344969|gb|ACB80381.1| putative signal-transduction protein with CBS domains
[Methylobacterium populi BJ001]
Length = 143
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQ-HIAGIFTE 115
++VA +L KG S + T+++A+ +A+ IG+LVV G+ + + GI +E
Sbjct: 1 MTVARILAEKG----SSVVTVPPHRTIDEAIHLLAEKQIGALVV---GDAEGRVIGILSE 53
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
RD +R + +G S ++ MT K++T A+I M+ MT+ RH+PV+ DG
Sbjct: 54 RDVMRALASEGASALDRPISHYMT--AKVVTCTRRASIEDVMETMTEGRFRHLPVVEDGH 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+VG++SI DVV+ + + E + + ++I
Sbjct: 112 LVGVVSIGDVVKRRIATVEAEHRAMRDYI 140
>gi|156938201|ref|YP_001435997.1| hypothetical protein Igni_1414 [Ignicoccus hospitalis KIN4/I]
gi|156567185|gb|ABU82590.1| CBS domain containing protein [Ignicoccus hospitalis KIN4/I]
Length = 127
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 9/118 (7%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
C + T+++ V M HN+GS+++L E + GIFTERD +R +G P+ V++
Sbjct: 14 CPPNSTLKEVVHKMRAHNVGSVLILNGDE---LVGIFTERDLVRAF-DEGAKPE-DLVSD 68
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQ 192
MT N ++ P ++ + A+Q M IRH+PV+ +GR++G++S+ DVV A++ QQ
Sbjct: 69 FMT-RNPIVVNPEES-LESALQKMLAHGIRHLPVVSPEGRVLGVVSLRDVVEALLAQQ 124
>gi|37680284|ref|NP_934893.1| signal-transduction protein [Vibrio vulnificus YJ016]
gi|37199031|dbj|BAC94864.1| predicted signal-transduction protein [Vibrio vulnificus YJ016]
Length = 625
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQH---IAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
T++ A + MA + SL+VL+ ++++ IAGI T+RD ++V QG+SP VA +M
Sbjct: 168 TIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEA-VASVM 226
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
T + +I L +A + AM M ++ H+P++ G R++G+I D+VR
Sbjct: 227 TPQ--VIRLDHNAYVYEAMLTMLRHNVHHLPILQGDRLLGIIEATDIVR 273
>gi|320155965|ref|YP_004188344.1| signal-transduction protein containing cAMP-binding and CBS domains
[Vibrio vulnificus MO6-24/O]
gi|319931277|gb|ADV86141.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus MO6-24/O]
Length = 625
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQH---IAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
T++ A + MA + SL+VL+ ++++ IAGI T+RD ++V QG+SP VA +M
Sbjct: 168 TIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEA-VASVM 226
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
T + +I L +A + AM M ++ H+P++ G R++G+I D+VR
Sbjct: 227 TPQ--VIRLDHNAYVYEAMLTMLRHNVHHLPILQGDRLLGIIEATDIVR 273
>gi|333990145|ref|YP_004522759.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333486113|gb|AEF35505.1| transcriptional regulator [Mycobacterium sp. JDM601]
Length = 142
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + D TV + + +A+HNIG++VV+ Q G+ +ERD
Sbjct: 3 IADVLRNKG----AAVVTIHPDATVMELLAGLAEHNIGAMVVIGTDGLQ---GVASERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQ-LMTDKHIRHVPVI-DGRIV 176
+R++ G S V+ IMT +L+ + ++ + LMT+ RH+PV+ DGR+
Sbjct: 56 VRQLHVHGASLLARPVSAIMT---RLVATCTKSDTADEVSVLMTEHRARHIPVLEDGRLA 112
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI DVV++ +E+ + E +L +I
Sbjct: 113 GIVSIGDVVKSRMEELQAEHAQLRSYI 139
>gi|260426180|ref|ZP_05780159.1| CBS domain protein [Citreicella sp. SE45]
gi|260420672|gb|EEX13923.1| CBS domain protein [Citreicella sp. SE45]
Length = 144
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V ++L K DD V + D TV A K +A+ IG +VV + G Q GI +ER
Sbjct: 1 MQVQQILKDKADDGV---VTVTPDATVAAAAKVLAERRIGGVVVSEDG--QTPLGILSER 55
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + G RV +MT + K + D+N++ A MT RH+PVI DG +
Sbjct: 56 DIVRVLGTDGPDVLAWRVDALMTRDLKTCSRDDDSNVVLAR--MTKGRFRHLPVIEDGVM 113
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
VGMISI DVV A + + E + L I G
Sbjct: 114 VGMISIGDVVAAQISELSMEKEALQGMIMG 143
>gi|121605651|ref|YP_982980.1| hypothetical protein Pnap_2757 [Polaromonas naphthalenivorans CJ2]
gi|120594620|gb|ABM38059.1| CBS domain containing protein [Polaromonas naphthalenivorans CJ2]
Length = 151
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ VA++L KG+ + + D+ + A MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVADILRVKGN----TLYTVQPDEPLAKAADIMAEKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + IV G T V + M D +T D I ++M D+H R++PV+ + +
Sbjct: 54 EVIVCIVANGGEIGRTLVRKAMDDHP--LTCTPDTEIDEVRRMMLDRHARYMPVMSQKML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS+ DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISLYDVAKAVVDSQNFENKMLKAYIR 140
>gi|405378312|ref|ZP_11032237.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397325220|gb|EJJ29560.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 144
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 83/147 (56%), Gaps = 9/147 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D V + + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRDVVTTG----PNTTVAEAAAILSKKKIGAIVVV--GMENKISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ ++ +MT +K++ ++ M+LMT K RHVPV +G++
Sbjct: 58 LVHVIAKSGKDGLDQTLSSVMT--SKVLRCNEQTSVHELMELMTSKRFRHVPVEANGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G+ISI DVV++ + + + E + + +I
Sbjct: 116 GIISIGDVVKSRIAEVEREAEEIKAYI 142
>gi|402824762|ref|ZP_10874101.1| hypothetical protein LH128_17452 [Sphingomonas sp. LH128]
gi|402261693|gb|EJU11717.1| hypothetical protein LH128_17452 [Sphingomonas sp. LH128]
Length = 141
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 79/133 (59%), Gaps = 6/133 (4%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
+ + C TV +A +A+ IG++ V++ GE IAGIF+ERD + K+ G
Sbjct: 12 AVVTCDVAMTVREAAGILAEKRIGAVPVMENGE---IAGIFSERDVIYKLRELGADMLDM 68
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQ 191
+ IMT +T+ + +++ A+ LMT + IRH+PV+ +GR+VG +SI D+V+ +++
Sbjct: 69 PLGHIMTALP--VTIEPETSVMAALSLMTRRRIRHLPVVKNGRMVGFVSIGDLVKYRIDK 126
Query: 192 QKGELKRLNEFIR 204
+ E + ++I+
Sbjct: 127 IENEAAAMRDYIQ 139
>gi|14590193|ref|NP_142258.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
horikoshii OT3]
gi|3256656|dbj|BAA29339.1| 178aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 178
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 6/116 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ D+V K ++++ +GS VV+ GE + G+ TERD L K+V +G+ PK +V EI
Sbjct: 19 KPTDSVHKVAKVLSKNKVGSAVVMDKGE---VLGVVTERDILDKVVAKGKDPKEVKVEEI 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQ 192
MT + + D ++ A++LMT+K +R + V G+ +G ++ D++ A+ Q
Sbjct: 76 MTKNP--VKIEYDYDVQDAIELMTEKGVRRILVTKFGKPIGFVTATDLLAALASQN 129
>gi|256810616|ref|YP_003127985.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256793816|gb|ACV24485.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 194
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D T+ D M ++NIG++V++ E GI TERD ++++V + PK
Sbjct: 18 ITATKDMTIYDIANIMTENNIGAVVIV---ENNKPVGILTERDIVKRVVSKNLKPKDVLA 74
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
E+M+ K++T+P +A++ A ++M I+ +PV+ DG +VG+I+ D+V+
Sbjct: 75 EEVMS--KKIVTIPQNASLTEAAKIMATHGIKRLPVVKDGELVGIITQSDIVK 125
>gi|399039437|ref|ZP_10735041.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF122]
gi|398062725|gb|EJL54495.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF122]
Length = 144
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V +L TKG D V + + TV +A +++ IG++V++ G + I+GIFTERD
Sbjct: 4 TVKAILDTKGRDVVTAG----PNTTVSEAAVILSKKKIGAIVIV--GMENKISGIFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G + V +MT K+ D+ + M LMT + RHVPV +G++
Sbjct: 58 VVHAIAKGGAACLDQPVGSLMT--AKVYRCHEDSTVNDLMGLMTSRRFRHVPVETNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV+ + + + E +++ +I G
Sbjct: 116 GIISIGDVVKTRIAEVELEAEQIKAYIAG 144
>gi|54022043|ref|YP_116285.1| hypothetical protein nfa790 [Nocardia farcinica IFM 10152]
gi|54013551|dbj|BAD54921.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 156
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 63 LMTKGDD--KVGS-WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYL 119
LMT D K G+ W+ DTVE A + MA +GSLVV E + + GI T+RD +
Sbjct: 17 LMTTARDIMKPGAQWIS--KQDTVERAAQLMADLGVGSLVVAD--ENERMCGIVTDRDIV 72
Query: 120 RKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGM 178
K V G +P T AE+ + + +DA++ + M + ++ +PVI+ R+VGM
Sbjct: 73 VKCVAHGANPATTPAAELCEATPRWVA--ADADVEEVLDAMENHRVKRMPVIENKRLVGM 130
Query: 179 ISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
IS D+ R + + Q L+EF+ Y
Sbjct: 131 ISEADLARHLDDNQ------LSEFVTAVY 153
>gi|17546282|ref|NP_519684.1| hypothetical protein RSc1563 [Ralstonia solanacearum GMI1000]
gi|83748285|ref|ZP_00945310.1| CBS domain containing protein [Ralstonia solanacearum UW551]
gi|207742932|ref|YP_002259324.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
solanacearum IPO1609]
gi|300703865|ref|YP_003745467.1| hypothetical protein RCFBP_11559 [Ralstonia solanacearum CFBP2957]
gi|421898041|ref|ZP_16328408.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
solanacearum MolK2]
gi|17428579|emb|CAD15265.1| probable cystathionine-beta-synthase domain harboring protein
[Ralstonia solanacearum GMI1000]
gi|83725017|gb|EAP72170.1| CBS domain containing protein [Ralstonia solanacearum UW551]
gi|206589247|emb|CAQ36209.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
solanacearum MolK2]
gi|206594327|emb|CAQ61254.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
solanacearum IPO1609]
gi|299071528|emb|CBJ42852.1| conserved protein of unknown function, CBS
(cystathionine-beta-synthase) domain [Ralstonia
solanacearum CFBP2957]
Length = 151
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 11/150 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + ++ AV+ MA+++IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSDILHVKGN----TLYTVAPETKLQVAVQTMAEYDIGSLVVMEYGE---LVGMLTFR 53
Query: 117 DYLRKIV-GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR- 174
+ + + G+ T + ++M D T ++ N ++M ++H R++PV+D R
Sbjct: 54 EIILVLARNNGKVDDGTTIRKVMDDHPLTCTPETEVN--EVRRMMLERHARYLPVLDNRT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV +AV E+Q E K L +IR
Sbjct: 112 LMGVISFYDVAKAVFEEQNFENKMLKAYIR 141
>gi|409095639|ref|ZP_11215663.1| hypothetical protein TzilA_03180 [Thermococcus zilligii AN1]
Length = 136
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
+ + DDTV+ A + MA+ +IGSLVV+ + ++ G T+ D ++++V G P T
Sbjct: 15 LIGVKPDDTVKRASEVMAEFDIGSLVVVD--DSGNVVGFLTKGDIIKRLVIPGL-PNTTP 71
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRA 187
V E+MT + L+T+PS A + + +++ K I+HV + + GRIVG+ SI D++ A
Sbjct: 72 VKEVMTKD--LVTVPSTATLREVLDVLSKKGIKHVLIEEGGRIVGIFSISDLLEA 124
>gi|27365570|ref|NP_761098.1| signal transduction protein [Vibrio vulnificus CMCP6]
gi|27361718|gb|AAO10625.1| Predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus CMCP6]
Length = 625
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQH---IAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
T++ A + MA + SL+VL+ ++++ IAGI T+RD ++V QG+SP VA +M
Sbjct: 168 TIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEP-VASVM 226
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
T + +I L +A + AM M ++ H+P++ G R++G+I D+VR
Sbjct: 227 TPQ--VIRLDHNAYVYEAMLTMLRHNVHHLPILQGNRLLGIIEATDIVR 273
>gi|448823422|ref|YP_007416587.1| hypothetical protein CU7111_0750 [Corynebacterium urealyticum DSM
7111]
gi|448276919|gb|AGE36343.1| hypothetical protein CU7111_0750 [Corynebacterium urealyticum DSM
7111]
Length = 620
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 16/148 (10%)
Query: 60 AEVLMTK-GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+EVL T G + S T+ DA M + N+ SL+V+ + + + GI T+RD
Sbjct: 150 SEVLRTPLGAFAITDPAATSSQTTLRDAAIRMGEFNVSSLLVI---DDRELRGIITDRDM 206
Query: 119 LRKIVGQ--GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
R + + G SP V+E MT I+L SDA + AM LM ++ I H+PV+ DG++
Sbjct: 207 RRSVAAEISGDSP----VSEAMT--ANPISLGSDALVFEAMLLMAERGIHHIPVVDDGKV 260
Query: 176 VGMISIVDVVRAVVEQQ---KGELKRLN 200
+G+I+ D++R + G+L R N
Sbjct: 261 MGIIAAADIMRLMQSDPLYLSGQLARQN 288
>gi|375083205|ref|ZP_09730235.1| hypothetical protein OCC_11512 [Thermococcus litoralis DSM 5473]
gi|374742159|gb|EHR78567.1| hypothetical protein OCC_11512 [Thermococcus litoralis DSM 5473]
Length = 136
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 71/112 (63%), Gaps = 6/112 (5%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
R +DTV++A K M +IGSLVV+ E+ ++ G FT+ D +R+++ G P T V E
Sbjct: 18 VRPEDTVQEACKVMVDFDIGSLVVI--DEKDNVVGFFTKSDIIRRVIVPGL-PYTTPVKE 74
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRA 187
IMT + LIT+ ++ + +++M K I+H+ V +G++VG+ ++ D++ A
Sbjct: 75 IMTKD--LITVDTNTPLKEVLKIMAAKRIKHILVREEGKVVGIFTLSDLLEA 124
>gi|449068365|ref|YP_007435446.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
gi|449036873|gb|AGE72298.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
Length = 150
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R DD+V A + M +HNIGSL+V+ + ++GI TERD +R I + V+
Sbjct: 3 REDDSVRFAAEEMKKHNIGSLIVID--NRGKVSGIITERDLVRAI---AEGNINSTVSNY 57
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGE 195
MT +T D N A+Q+M D RH+P+I DGR+ G++SI D+ R +++
Sbjct: 58 MTRNVIGVTENFDPN--QALQVMLDHGFRHLPIIGKDGRVKGILSIRDLARTLIDPHYLT 115
Query: 196 LKRLNEFIRG 205
+ E +RG
Sbjct: 116 YGKEPEEVRG 125
>gi|424890308|ref|ZP_18313907.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393172526|gb|EJC72571.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 144
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRD----VFTAGPNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ +A++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKYGKDGLDQTLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|20093963|ref|NP_613810.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
gi|20178342|sp|P50100.2|Y525_METKA RecName: Full=Uncharacterized protein MK0525; AltName: Full=OrfX
gi|19886922|gb|AAM01740.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
Length = 196
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
++ VE A K M +H IGS+V++ E+ GI TERD + K+V QG++P +IM
Sbjct: 20 TETAVEIAYK-MREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
+ +IT+ D + A++LM DK IR +P++D G+++G++++ D+++
Sbjct: 77 S--QPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQV 125
>gi|341613857|ref|ZP_08700726.1| hypothetical protein CJLT1_02852 [Citromicrobium sp. JLT1363]
Length = 143
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
S + C + T+ DA+ +A IG+L V+ E + + GIF+ERD + + +G
Sbjct: 14 SIVTCDARMTMRDAIAILADKRIGALPVM---EDRRVVGIFSERDVIYCMAKEGGGCLDR 70
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQ 191
V E+MT + IT+ I A+ LMT + IRH+PV+ +G ++G +SI D+V++ E+
Sbjct: 71 PVGEVMT--SPAITVERSEKIDEALSLMTRRRIRHLPVVEEGSLLGFVSIGDLVKSRFEK 128
Query: 192 QKGELKRLNEFIR 204
+ E + + +I+
Sbjct: 129 VQQEAQEMRSYIQ 141
>gi|126178295|ref|YP_001046260.1| signal-transduction protein [Methanoculleus marisnigri JR1]
gi|125861089|gb|ABN56278.1| putative signal-transduction protein with CBS domains
[Methanoculleus marisnigri JR1]
Length = 150
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 71 VGSWLCCR-------SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123
+G CCR D + K M + N+GS+VV+ G+ + GI T+RD +++
Sbjct: 1 MGLVKCCREQVVAVSPDTPAVEVAKIMGEKNVGSVVVVT-GDNRP-TGILTDRDLAVRVM 58
Query: 124 GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISI 181
Q ++P R +EI+T + +IT I A+Q MT++ IR +P++D GR++G++++
Sbjct: 59 AQEKNPGEVRASEILTRD--VITFQDSMGIYEAIQKMTNEGIRRMPIVDDAGRLIGIVTM 116
Query: 182 VDVVRAVVEQQKGELKRL 199
D+VR + E+ K +
Sbjct: 117 DDIVRMLGEEMAAIAKNI 134
>gi|209884748|ref|YP_002288605.1| hypothetical protein OCAR_5609 [Oligotropha carboxidovorans OM5]
gi|337741598|ref|YP_004633326.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386030614|ref|YP_005951389.1| hypothetical protein OCA4_c23880 [Oligotropha carboxidovorans OM4]
gi|209872944|gb|ACI92740.1| protein with 2 CBS domains [Oligotropha carboxidovorans OM5]
gi|336095682|gb|AEI03508.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336099262|gb|AEI07085.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 142
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V VL TKG + + SD T+ +A+ ++ +IG+++V+K HI GI +ER
Sbjct: 1 MTVQAVLGTKGFEVI----SIHSDATLSEAIALLSSRHIGAVLVMK---DHHIEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + +G V ++MT K++T M+ MT+ RH+PV++ R+
Sbjct: 54 DVVRVLAKRGAEALQEPVGDVMT--RKVVTCRRADTAASIMEKMTNGKFRHLPVVENDRV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKWRVKEFEHEQEVLRDYIK 140
>gi|146304239|ref|YP_001191555.1| signal transduction protein [Metallosphaera sedula DSM 5348]
gi|145702489|gb|ABP95631.1| putative signal transduction protein with CBS domains
[Metallosphaera sedula DSM 5348]
Length = 128
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
++ T+++ K M + +GS++V GE + GIFT+RD +R I + R M
Sbjct: 17 ANTTLQETCKLMLEKGVGSVIVTDNGEPK---GIFTDRDAVRAIANGASAMDELRTVATM 73
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQ 192
D L+T+ + +I+ A +LM +K IRH+PV +G IVGMIS+ D+ + E Q
Sbjct: 74 HD---LVTVNEEVDIIQAAKLMAEKKIRHLPVTNSNGEIVGMISVTDLSAELKEMQ 126
>gi|334341972|ref|YP_004546952.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334093326|gb|AEG61666.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 146
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D + ++A + M+QHN+GS+ V++ G+ G+ T+RD +I QG P+ T+V IMT
Sbjct: 19 DQSAQEAARLMSQHNVGSIPVVENGK---CVGMITDRDITLRITSQGLDPQSTQVQSIMT 75
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKG 194
+ ++T + ++ A LM ++ IR +PV+ +G++ GM+++ D+ + Q +
Sbjct: 76 TD--VVTGAPEMDVHQAANLMAERQIRRLPVVENGQVTGMVALGDLATTDIYQNEA 129
>gi|325970898|ref|YP_004247089.1| hypothetical protein [Sphaerochaeta globus str. Buddy]
gi|324026136|gb|ADY12895.1| CBS domain containing membrane protein [Sphaerochaeta globus str.
Buddy]
Length = 147
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG--QGRSPKYTRVAEI 137
DD + A+ + +H IG+L+VL EQ I GI +ERD +R + + +V E+
Sbjct: 21 DDALSHALLKLTEHKIGALLVLN--EQGDIKGILSERDIIRHFSKRLEHLNTASIKVREV 78
Query: 138 MTDENKLITLP--SDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKG 194
MT + P S + LH LMT H RH+PV+ D +++GMISI DVV+A ++++
Sbjct: 79 MTTGVTYVK-PHQSSEDCLH---LMTAGHFRHLPVVEDDKVIGMISIGDVVKAALDERDF 134
Query: 195 ELKRLNEFIRGEY 207
++ L +I Y
Sbjct: 135 QIGELEHYITNAY 147
>gi|90417798|ref|ZP_01225710.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337470|gb|EAS51121.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
Length = 143
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L KG D V + + T+E+ ++ +A IG++V+ E +AGI +ER
Sbjct: 1 MNVRHILEAKGRDVV----TLKPEATLEETMQVLANRRIGAIVL--TNENGGVAGIVSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + G V E+MT + T + N AM++MT RH+PV + R+
Sbjct: 55 DVVRVLGTAGVGAISQSVGEVMTSQVSTCTEATTVN--QAMEMMTTGRFRHLPVCENDRL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI DVV+ +E+ + E + E+I
Sbjct: 113 VGIISIGDVVKQRIEEVEREAMEMREYI 140
>gi|114777295|ref|ZP_01452306.1| CBS [Mariprofundus ferrooxydans PV-1]
gi|114552440|gb|EAU54923.1| CBS [Mariprofundus ferrooxydans PV-1]
Length = 139
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM-TD 140
TV +A K M ++ IGS+V+ I GIFTER+ + ++VG+ R+P ++ ++M TD
Sbjct: 19 TVLEAAKLMTENYIGSVVI---TSHSRIVGIFTERELMMRVVGKDRNPDTVKIKDVMHTD 75
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRL 199
K + SDA+ A+ +M K RH+ V DG +G+IS+ D++ ++++ + +L
Sbjct: 76 HLK---ISSDASCEEALHIMETKRCRHLLVFDGDEFIGLISLRDIIVLTLQEKDDLITQL 132
Query: 200 NEFI 203
+I
Sbjct: 133 EGYI 136
>gi|120404861|ref|YP_954690.1| signal-transduction protein [Mycobacterium vanbaalenii PYR-1]
gi|119957679|gb|ABM14684.1| putative signal-transduction protein with CBS domains
[Mycobacterium vanbaalenii PYR-1]
Length = 142
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++VL KG + + +V + ++ HNIG++VV+ P + GI +ERD
Sbjct: 3 ISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLLGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+RK+ G V+EIM+ + T D + LMT+ +RHVPV+ DGR+ G
Sbjct: 56 VRKLHDMGADLLRRPVSEIMS--TLVATCTPDDTVDSLSALMTNNRVRHVPVVVDGRLAG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + E + L +I
Sbjct: 114 IVSIGDVVKTRMEELEREQQHLQAYI 139
>gi|70605897|ref|YP_254767.1| hypothetical protein Saci_0044 [Sulfolobus acidocaldarius DSM 639]
gi|449066089|ref|YP_007433171.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
gi|68566545|gb|AAY79474.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449034597|gb|AGE70023.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
Length = 164
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R DD+V A + M +HNIGSL+V+ + ++GI TERD +R I + V+
Sbjct: 17 REDDSVRFAAEEMKKHNIGSLIVID--NRGKVSGIITERDLVRAI---AEGNINSTVSNY 71
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGE 195
MT +T D N A+Q+M D RH+P+I DGR+ G++SI D+ R +++
Sbjct: 72 MTRNVIGVTENFDPN--QALQVMLDHGFRHLPIIGKDGRVKGILSIRDLARTLIDPHYLT 129
Query: 196 LKRLNEFIRG 205
+ E +RG
Sbjct: 130 YGKEPEEVRG 139
>gi|383778866|ref|YP_005463432.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
gi|381372098|dbj|BAL88916.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
Length = 145
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
++++L KGD V + V ++ +AQH IG++VV + G + GI +ERD
Sbjct: 3 ISDILRVKGDQVV----TVPPETPVVRLLEVLAQHRIGAVVVSRDG--TTVEGIVSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + +G V+ I T + + T+ DA + +LMT++ RHVPV+ DG + G
Sbjct: 57 VRALAVRGADVLTEPVSMIATTQVR--TVAPDAQLEDVERLMTERRFRHVPVVTDGVLSG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGE 206
++SI DVV+ +++ + E L E+I GE
Sbjct: 115 VVSIGDVVKNRIDELETERTTLAEYITGE 143
>gi|57640493|ref|YP_182971.1| hypothetical protein TK0558 [Thermococcus kodakarensis KOD1]
gi|57158817|dbj|BAD84747.1| hypothetical protein, conserved, containing CBS domains and PHD
finger motif [Thermococcus kodakarensis KOD1]
Length = 177
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R DDT+ + +A++ +GS VV+ E + I GI T+RD L K+V +G+ PK V ++
Sbjct: 18 RPDDTIHKVARILARNKVGSAVVVD--ENEEIVGIITDRDILDKVVAKGKDPKKVLVKDV 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
MT K +T+ D I A+ M DK IR + V G+ +G ++ D++ A+
Sbjct: 76 MT--TKPVTIEDDYTIQDAIDKMMDKGIRRLLVTRVGKPIGFVTAADLLAAL 125
>gi|331700303|ref|YP_004336542.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
gi|326954992|gb|AEA28689.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
Length = 141
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++VL KG + +D +V D + + N G+L V+ + +AGI +ERD
Sbjct: 3 ISDVLRNKG----SAVATIGADASVGDVIAVLTTGNYGALPVM---DGARLAGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+RK+ G T VA+IMT + ++T + L ++MT++ IRH+PVI DG +VG
Sbjct: 56 VRKLHELGPDLVRTPVADIMTAD--VVTCSPGDSALELSRVMTERRIRHLPVIADGELVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI D+V+A ++ + E ++L +I
Sbjct: 114 IVSIGDMVKARIDSLEVEREQLQSYI 139
>gi|374632868|ref|ZP_09705235.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Metallosphaera yellowstonensis MK1]
gi|373524352|gb|EHP69229.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Metallosphaera yellowstonensis MK1]
Length = 138
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 9/127 (7%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
S + D ++D M + N+GS++V + G+ GI TERD +R I G G+S +
Sbjct: 19 SVITVTRDLPLKDVAVVMTEKNVGSVIVTENGKP---VGIITERDIVRAI-GSGKSLEIP 74
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVE 190
+IMT LIT+ D+ I A+ LM +IRH+PV+D G++VG++SI D+ RA+ +
Sbjct: 75 -ADKIMT--ASLITIREDSPITGALSLMRSYNIRHLPVVDGEGKLVGIVSIRDIARALDD 131
Query: 191 QQKGELK 197
+G+++
Sbjct: 132 LFEGDME 138
>gi|218458413|ref|ZP_03498504.1| hypothetical protein RetlK5_02718 [Rhizobium etli Kim 5]
Length = 144
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D V + S+ TV +A +++ IG++VV+ G I+G+FTERD
Sbjct: 4 SVKAILDLKGRDVVTAG----SNTTVAEAAVILSKKKIGAIVVV--GMDNRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ +A++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKHGKEGLDQPLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVVREAEDIKAYIAG 144
>gi|375094239|ref|ZP_09740504.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
gi|374654972|gb|EHR49805.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
Length = 127
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
+ + V + + MA+ N+G+L V GE + GI T+RD + K++ +G+ P V E++
Sbjct: 20 TSEAVSEVARIMARSNVGALPVR--GEDNRLKGIVTDRDIVVKVLAEGKDPMAVHVGELV 77
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
E +L T+ DA++ A++ M+ H+R +PV+DG +VG++S VD R
Sbjct: 78 --EGELHTVRPDADVEEALEQMSRHHVRRLPVMDGPELVGIVSEVDAAR 124
>gi|83595073|ref|YP_428825.1| signal transduction protein [Rhodospirillum rubrum ATCC 11170]
gi|386351840|ref|YP_006050088.1| signal transduction protein [Rhodospirillum rubrum F11]
gi|83577987|gb|ABC24538.1| Predicted signal-transduction protein containing CBS domains
[Rhodospirillum rubrum ATCC 11170]
gi|346720276|gb|AEO50291.1| signal transduction protein [Rhodospirillum rubrum F11]
Length = 148
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
+ ++ T + + +A + I ++VV++ G + GI TERD ++V +G P
Sbjct: 14 TIFFVSAETTAREVARTLADNKIAAVVVMEDG---VLKGIITERDVTARLVAKGGDPDSV 70
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQ 191
IMT + TL + A+++M + RH+PV+DG +VGM+SI D+ V +Q
Sbjct: 71 MARAIMTPDPD--TLAPEDTAEDALRMMRLRGYRHLPVVDGEGVVGMVSIRDLYAVVTDQ 128
Query: 192 QKGELKRLNEFIRGEYY 208
+ ++K FI GE Y
Sbjct: 129 LERDMKTHESFIYGEQY 145
>gi|326332849|ref|ZP_08199107.1| CBS domain protein [Nocardioidaceae bacterium Broad-1]
gi|325949407|gb|EGD41489.1| CBS domain protein [Nocardioidaceae bacterium Broad-1]
Length = 143
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 9/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL K + + S TV D + +A+H IG+ VV G +AGI +ERD
Sbjct: 3 IADVLTRKA---IAEVVTIASTATVRDLLGVLAEHGIGACVVSSDGAA--VAGIVSERDV 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ + + V+ IMT E + T DA I + +MT + IRH+PV+ DG +VG
Sbjct: 58 VRRL-HENDALLAAEVSSIMTAEVE--TCAPDATIDEILGIMTKRRIRHMPVVADGALVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI D+V+ ++Q E +L ++
Sbjct: 115 IVSIGDLVKHRIDQLAFERDQLEAYV 140
>gi|187929070|ref|YP_001899557.1| hypothetical protein Rpic_1990 [Ralstonia pickettii 12J]
gi|187725960|gb|ACD27125.1| CBS domain containing protein [Ralstonia pickettii 12J]
Length = 151
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 11/150 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + ++ AV+ MA+ +IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSDILHVKGN----TLYTVAPETKLQVAVQTMAEKDIGSLVVMEYGE---LVGMLTFR 53
Query: 117 DYLRKIV-GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR- 174
+ ++ + G + T + ++M D T ++ N ++M + H+R++PV+D R
Sbjct: 54 EIIKVVAKNHGSVGEGTTIRKVMDDHPVTCTPETEVN--EVRRIMLEHHVRYLPVLDSRT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV +AV+E Q E K L +IR
Sbjct: 112 LMGVISFYDVAKAVLEDQSFENKMLKAYIR 141
>gi|336177199|ref|YP_004582574.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
gi|334858179|gb|AEH08653.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
Length = 144
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C +T+ DA + M +G+L + G+ + GI T+RD + + + +GR P TR
Sbjct: 14 CIGESETLVDAARRMRDLGVGALPIC--GDDNRLQGIITDRDIVIRCLAEGRDPATTRAR 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKG 194
E+ + + + +DAN+ +Q M + I+ +PVID ++VGMIS D+ R + E++ G
Sbjct: 72 EL--GQGRPFYIDADANVDEVLQQMMEHRIKRLPVIDNNQLVGMISESDLARNLPEEKLG 129
Query: 195 EL 196
+L
Sbjct: 130 QL 131
>gi|1002715|gb|AAA92086.1| similar to the inosine monophosphate dehydrogenase from Pyrococcus
furiosus (SwissProt Accession Number P42851); orfX
protein; Method: conceptual translation supplied by
author, partial [Methanopyrus kandleri]
Length = 172
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
++ VE A K M +H IGS+V++ E+ GI TERD + K+V QG++P +IM
Sbjct: 20 TETAVEIAYK-MREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
+ +IT+ D + A++LM DK IR +P++D G+++G++++ D+++
Sbjct: 77 S--QPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQV 125
>gi|424895119|ref|ZP_18318693.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393179346|gb|EJC79385.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 144
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRD----VFTAGPNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ +A++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKYGKDGLDQTLAQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGKLS 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEEIKAYIAG 144
>gi|452948756|gb|EME54234.1| signal transduction protein [Amycolatopsis decaplanina DSM 44594]
Length = 143
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 10/136 (7%)
Query: 72 GSWLCCRSDDT-VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
G+ + S +T V + ++ +A+HN+G+LVV+ + I GI +ERD +R++ +G
Sbjct: 11 GAAVATVSPETNVTELLERLAEHNVGALVVVDA--EGGIVGIVSERDVVRRLNERGPQLL 68
Query: 131 YTRVAEIMTDENKLIT--LPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRA 187
V+ IMT K++ P D+ + LMT++ IRHVPV+ DGR+ G++SI DVV+
Sbjct: 69 DGSVSAIMT---KMVASCTPEDS-VDQLSILMTERRIRHVPVVVDGRLAGIVSIGDVVKT 124
Query: 188 VVEQQKGELKRLNEFI 203
+EQ + ++L +I
Sbjct: 125 RMEQLEKSQEQLEAYI 140
>gi|419952524|ref|ZP_14468671.1| nucleotidyltransferase [Pseudomonas stutzeri TS44]
gi|387970569|gb|EIK54847.1| nucleotidyltransferase [Pseudomonas stutzeri TS44]
Length = 644
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ C + +A M Q N+GS+V++ EQQH GIFT RD LR+++G G + +
Sbjct: 188 IACLPGLALREATALMQQSNVGSIVIVD--EQQHPLGIFTLRD-LRRVIGTGAAELDAAI 244
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
+ MT E LP +A A MT++HI HV V+D G++VG+IS D+
Sbjct: 245 SSYMTHEP--FHLPPEATAFDAAIAMTERHIAHVCVVDAGQLVGVISERDL 293
>gi|15922679|ref|NP_378348.1| hypothetical protein ST2348 [Sulfolobus tokodaii str. 7]
gi|15623469|dbj|BAB67457.1| CBS domain protein [Sulfolobus tokodaii str. 7]
Length = 133
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 15/119 (12%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVL---KPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
+ D + D K M + NIGS++V+ KP GI TERD ++ I G+G+S +
Sbjct: 15 ISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKP------VGIITERDIVKAI-GKGKSLE- 66
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAV 188
T+ E MT LIT+ D+ I A+ LM +IRH+PV+D G + G+ISI D+ RA+
Sbjct: 67 TKAEEFMT--ASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAI 123
>gi|409095429|ref|ZP_11215453.1| hypothetical protein TzilA_02130 [Thermococcus zilligii AN1]
Length = 177
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R DDTV A + +A++ +GS VV+ E + I GI T+RD L K+V + + PK V E+
Sbjct: 18 RPDDTVHKAAQILARNKVGSAVVVD--ENERIVGIITDRDILDKVVAKEKDPKNVLVREV 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
MT+ K IT+ D I A++ M +K IR + V G+ VG ++ D++ A+
Sbjct: 76 MTE--KPITIEDDYTIQDAIERMMEKGIRRLLVTRLGKPVGFVTAADLLAAL 125
>gi|374607424|ref|ZP_09680225.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
gi|373555260|gb|EHP81830.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
Length = 142
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG S + +V + ++ HNIG++VV+ P + GI +ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + +G V+EIMT T P+D+ + LMT K +RH+PV+ +GR+ G
Sbjct: 56 VRALQERGADLLRLPVSEIMTTFVATCT-PNDS-VDSLSVLMTTKRVRHIPVMENGRLTG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + ++L ++I
Sbjct: 114 IVSIGDVVKTRMEELEATQEQLQDYI 139
>gi|289192998|ref|YP_003458939.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288939448|gb|ADC70203.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 194
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV + M ++NIG++V++ E GI TERD ++++V + PK E+M+
Sbjct: 23 DMTVYEIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEVMS 79
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
K+IT+P +A+I A ++M ++ +PV+ DG +VG+++ D+VR
Sbjct: 80 --KKIITIPQNASITEAAKIMATHGVKRLPVVKDGELVGIVTQSDIVR 125
>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
Length = 144
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L KGDDKV + + V DA + +A+ IG LVV + G+Q I GI +ERD
Sbjct: 3 VQQILKAKGDDKV---ITIKPGTLVSDAARILAERRIGGLVVSEDGKQ--IQGILSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + +G + R+ ++MT N + D + + MT+ RH+PV+ DG +VG
Sbjct: 58 VRSLAVRGATCLSDRIDDMMT-RNPVCCARGDTSD-QVLTRMTEGRFRHMPVVEDGELVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+++I DVV + + + E L I G
Sbjct: 116 IVTIGDVVSSRLSELAMEKDALQGMIMG 143
>gi|320161289|ref|YP_004174513.1| hypothetical protein ANT_18870 [Anaerolinea thermophila UNI-1]
gi|319995142|dbj|BAJ63913.1| hypothetical protein ANT_18870 [Anaerolinea thermophila UNI-1]
Length = 146
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 87/152 (57%), Gaps = 19/152 (12%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+V E+L KG D W + T+ +A+K MA+ +IG++ VL+ G+ + GIF+ERD
Sbjct: 3 TVKELLEEKGYD---VW-TVSPEMTLREALKLMAEKHIGAVPVLENGQ---VVGIFSERD 55
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPS-----DANILHAMQLMTDKHIRHVPVI- 171
+ R V +++ ++ +L+T P + + M +MT K +RH+PVI
Sbjct: 56 FARHAV------EFSECLDLEVPVRQLMTHPVYYVNLEQTVDECMAVMTAKKLRHLPVIQ 109
Query: 172 DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+G+++G+ISI DVV+ ++ ++ ++ L F+
Sbjct: 110 EGKLIGLISIGDVVKHILADKQNTIELLEHFL 141
>gi|197104580|ref|YP_002129957.1| hypothetical protein PHZ_c1114 [Phenylobacterium zucineum HLK1]
gi|196478000|gb|ACG77528.1| CBS domain protein [Phenylobacterium zucineum HLK1]
Length = 142
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L TKGD + R ++TV + + +G+LVVL + + + GI +ERD
Sbjct: 3 VSQILKTKGD----TVFTTRPEETVAEVAGLLHARGVGALVVL---DAERVVGIVSERDI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + G S V+ IMT N L P + + + MTD+ IRH+PV + R+VG
Sbjct: 56 VRAMAEDGASALTQPVSRIMT-ANVLFAEPGE-TVDGLLGRMTDRRIRHLPVCRNERLVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI D+V++ + + + E L +I
Sbjct: 114 IVSIGDLVKSKISEVEAEADGLKAYI 139
>gi|421887899|ref|ZP_16319030.1| conserved hypothetical protein, CBS (cystathionine-beta-synthase)
domain [Ralstonia solanacearum K60-1]
gi|378966754|emb|CCF95778.1| conserved hypothetical protein, CBS (cystathionine-beta-synthase)
domain [Ralstonia solanacearum K60-1]
Length = 151
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + ++ AV+ MA+++IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSDILHVKGN----TLYTVAPETKLQVAVQTMAEYDIGSLVVMEYGE---LVGMLTFR 53
Query: 117 DYLRKIV-GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR- 174
+ + + G T + ++M D T ++ N ++M ++H R++PV+D R
Sbjct: 54 EIILVLARNNGNVDDGTTIRKVMDDHPLTCTPETEVN--EVRRMMLERHARYLPVLDNRT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV +AV E+Q E K L +IR
Sbjct: 112 LMGVISFYDVAKAVFEEQNFENKMLKAYIR 141
>gi|429219834|ref|YP_007181478.1| signal transduction protein [Deinococcus peraridilitoris DSM 19664]
gi|429130697|gb|AFZ67712.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Deinococcus peraridilitoris DSM 19664]
Length = 155
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+CC D + D M +++ GS+ V++ + G+ T+RD + V G++P
Sbjct: 12 VCCTPDTNLRDVAAMMVEYDCGSVPVVENYDNMRAVGVVTDRDITVRTVAAGKNPLECCA 71
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQ 192
+ MTD ++++ +A+++ A++LM + +R +PV +G +VGM++ DV+R V +
Sbjct: 72 QDAMTD--TVVSISPEADLMDAIRLMEETKVRRLPVTSANGAVVGMVAQADVIRNVDNED 129
Query: 193 KGELKR 198
G + R
Sbjct: 130 AGLVVR 135
>gi|363421708|ref|ZP_09309792.1| IMP dehydrogenase [Rhodococcus pyridinivorans AK37]
gi|359734055|gb|EHK83038.1| IMP dehydrogenase [Rhodococcus pyridinivorans AK37]
Length = 143
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV + + + A+ NIG++VV E + +AGI TERD +R + +G S E+M+
Sbjct: 20 DTTVCELIGDFARFNIGAMVVC---EGKTVAGIVTERDIVRALHERGPSILAAPAHELMS 76
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
LP+D ++ + MT++ IRH+PV+ D R+VG++SI DVV++ +++ + E +
Sbjct: 77 -RTVTTCLPTD-SVDSLAETMTEQRIRHLPVVVDARLVGIVSIGDVVKSRIDELQTERDQ 134
Query: 199 LNEFI 203
L +I
Sbjct: 135 LASYI 139
>gi|57640971|ref|YP_183449.1| hypothetical protein TK1036 [Thermococcus kodakarensis KOD1]
gi|57159295|dbj|BAD85225.1| hypothetical protein, conserved, containing CBS domains
[Thermococcus kodakarensis KOD1]
Length = 136
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
+ + DDTV+ A + M + +IGSLVV+ E + G T+ D +R++V G P T
Sbjct: 15 LIGVKPDDTVKRAGEVMVEFDIGSLVVVD--ENGDVVGFLTKGDIIRRMVIPGL-PNTTP 71
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRA 187
V EIMT + L+T+PS A + + L++ K I+HV V +G+IVG+ SI D++ A
Sbjct: 72 VKEIMTKD--LVTVPSTAPLGEVLDLLSKKGIKHVLVEEEGKIVGIFSISDLLEA 124
>gi|392382266|ref|YP_005031463.1| conserved protein of unknown function,cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356877231|emb|CCC98042.1| conserved protein of unknown function,cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 149
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVV--LKPGEQQHIAGIFT 114
+ VA++L TK V RS +T+E+A++ M NI +LVV + E +AG+ +
Sbjct: 1 MKVADILRTKESRVV----TVRSGETIEEAIRLMRSENISALVVKDVCRTEGNAVAGMLS 56
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR 174
ERD + ++ +G S T V +M+ + T D +++HA++LM HIRH+PV+DG
Sbjct: 57 ERDVVYALLERGASVLKTPVFMLMSRAPQ--TCSPDDSLIHALELMDRHHIRHLPVLDGS 114
Query: 175 -IVGMISIVDVVR 186
+VG++S D +
Sbjct: 115 TLVGVVSARDFTK 127
>gi|172040445|ref|YP_001800159.1| hypothetical protein cur_0765 [Corynebacterium urealyticum DSM
7109]
gi|171851749|emb|CAQ04725.1| hypothetical protein cu0765 [Corynebacterium urealyticum DSM 7109]
Length = 620
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 60 AEVLMTK-GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+EVL T G + S T+ DA M + N+ SL+V+ + + + GI T+RD
Sbjct: 150 SEVLRTPLGAFAITDPAATSSQTTLRDAAIRMGEFNVSSLLVI---DDRELRGIITDRDM 206
Query: 119 LRKIVGQ--GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
R + + G SP V+E MT I+L DA + AM LM ++ I H+PV+ DGR+
Sbjct: 207 RRSVAAEISGDSP----VSEAMT--ANPISLGPDALVFEAMLLMAERGIHHIPVVDDGRV 260
Query: 176 VGMISIVDVVR 186
G+I+ D++R
Sbjct: 261 AGIIAAADIMR 271
>gi|299066573|emb|CBJ37763.1| conserved protein of unknown function, CBS
(cystathionine-beta-synthase) domain [Ralstonia
solanacearum CMR15]
Length = 151
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 85/150 (56%), Gaps = 11/150 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + ++ AV+ M++++IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSDILHVKGN----TLYTVAPETKLQVAVQTMSEYDIGSLVVMEYGE---LVGMLTFR 53
Query: 117 DYLRKIV-GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR- 174
+ + + G+ T + ++M D T ++ N ++M ++H R++PV+D R
Sbjct: 54 EIILVLARNNGKVDDGTTIRKVMDDHPLTCTPETEVN--EVRRMMLERHARYLPVLDNRT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV +AV E+Q E K L +IR
Sbjct: 112 LMGVISFYDVAKAVFEEQNFENKMLKAYIR 141
>gi|54024538|ref|YP_118780.1| hypothetical protein nfa25690 [Nocardia farcinica IFM 10152]
gi|54016046|dbj|BAD57416.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 144
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+AE+L KG + TV + +A+HNIG++VV PG + I+GI +ERD
Sbjct: 3 IAEILRRKGCE----VATVTPGTTVRALLAVLAEHNIGAVVV-SPGGGR-ISGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R + G T V++IMT + T + + ++MT+ +RH+PV+ D R+VG
Sbjct: 57 VRGLHEYGAGLLDTPVSDIMTTPVR--TCAPEDRVDGLRRIMTEHRVRHLPVVRDDRLVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
++SI DVV++ + + E + L ++++G Y
Sbjct: 115 IVSIGDVVKSAISELATERQLLVDYVQGRY 144
>gi|56696685|ref|YP_167046.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56678422|gb|AAV95088.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Ruegeria pomeroyi DSS-3]
Length = 607
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
C D TV+ A + M +I SL V + G + GI T+RD K+V + RSP T V +
Sbjct: 155 CAPDTTVQAAAQEMRARSISSLCVCEDGA---LVGILTQRDLSGKVVAEARSPD-TPVDQ 210
Query: 137 IMTDENKLITLPS--DANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVR 186
+MT L PS +++LHAM ++HI H+P+++ GR+VGM++ D+ R
Sbjct: 211 VMT-PAPLTLAPSAIGSDVLHAMM---ERHIGHIPIVEAGRLVGMVTQTDLTR 259
>gi|227828393|ref|YP_002830173.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
M.14.25]
gi|229585622|ref|YP_002844124.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
M.16.27]
gi|238620585|ref|YP_002915411.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
M.16.4]
gi|385776718|ref|YP_005649286.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus REY15A]
gi|227460189|gb|ACP38875.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus M.14.25]
gi|228020672|gb|ACP56079.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus M.16.27]
gi|238381655|gb|ACR42743.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus M.16.4]
gi|323475466|gb|ADX86072.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus REY15A]
Length = 129
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
M +N+GS++V+ G+ GI TERD +R I G+GRS + EIMT LIT+
Sbjct: 30 MTDNNVGSVIVVDNGKP---IGIITERDVVRAI-GKGRSLD-VKAEEIMT--ASLITIKE 82
Query: 150 DANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKG 194
D+ I A+ LM +IRH+PVI DG + G+ISI D+ RA+ + +G
Sbjct: 83 DSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARAIDDILEG 129
>gi|83309972|ref|YP_420236.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82944813|dbj|BAE49677.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 146
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
G + + ++ DA + +AQH IG+++V+ +AGI +ERD +R +
Sbjct: 14 GGIISVTPEASIGDAARLLAQHKIGAVLVMNG---DRVAGILSERDIVRGLADAVDVCIT 70
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVV 189
+V ++MT E + D + M++MT K IRH+PV+D G + G+++I DVV++ +
Sbjct: 71 AKVRDLMTAE--VFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTIGDVVKSRL 128
Query: 190 EQQKGELKRLNEFI 203
++ K E + L +++
Sbjct: 129 DETKMEAESLRDYV 142
>gi|385774073|ref|YP_005646640.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus HVE10/4]
gi|323478188|gb|ADX83426.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus HVE10/4]
Length = 129
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
M +N+GS++V+ G+ GI TERD +R I G+GRS + EIMT LIT+
Sbjct: 30 MTDNNVGSVIVVDNGKP---IGIITERDVVRAI-GKGRSLD-VKAEEIMT--ASLITIKE 82
Query: 150 DANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKG 194
D+ I A+ LM +IRH+PVI DG + G+ISI D+ RA+ + +G
Sbjct: 83 DSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARAIDDILEG 129
>gi|402487825|ref|ZP_10834640.1| inosine-5'-monophosphate dehydrogenase [Rhizobium sp. CCGE 510]
gi|401812993|gb|EJT05340.1| inosine-5'-monophosphate dehydrogenase [Rhizobium sp. CCGE 510]
Length = 142
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+SV +L KG D V + + TV +A +++ IG++VV+ G + I+G+FTER
Sbjct: 1 MSVKAILDLKGRDVVTAG----PNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRI 175
D + I G+ + ++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 55 DLVHAIAKHGKDGLDQPLGQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGKL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 113 AGIISIGDVVKSRIAEVEREAEEIKAYIAG 142
>gi|116626523|ref|YP_828679.1| signal-transduction protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229685|gb|ABJ88394.1| putative signal-transduction protein with CBS domains [Candidatus
Solibacter usitatus Ellin6076]
Length = 141
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V + MA +G+++VLK + +AGIF+ERD + +IV + R P T V ++MT +
Sbjct: 21 SVAQVARVMAGFKVGAILVLKGDD---LAGIFSERDLMTRIVLERRDPDLTPVRDVMTTD 77
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+ T+ A AM+ M + RH+PV DGR+V +S+ D++ V +Q E+ +
Sbjct: 78 --VCTIDESATPEEAMEAMQANNCRHLPVTRDGRVVAFLSMRDLMNFEVARQTEEIYHMR 135
Query: 201 EFI 203
+I
Sbjct: 136 AYI 138
>gi|15668834|ref|NP_247637.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
jannaschii DSM 2661]
gi|2496100|sp|Q58069.1|Y653_METJA RecName: Full=Uncharacterized protein MJ0653
gi|1592300|gb|AAB98648.1| inosine-5'-monophosphate dehydrogenase (guaB) [Methanocaldococcus
jannaschii DSM 2661]
Length = 194
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ D M ++NIG++V++ E GI TERD ++++V + PK E+M+
Sbjct: 25 SIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEVMS-- 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
K+IT+P +A+I A ++M I+ +PV+ DG +VG+++ D+VR
Sbjct: 80 KKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125
>gi|89054406|ref|YP_509857.1| signal-transduction protein [Jannaschia sp. CCS1]
gi|88863955|gb|ABD54832.1| putative signal-transduction protein with CBS domains [Jannaschia
sp. CCS1]
Length = 144
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
D G + +V +A K ++ IG+LVV G IAGI +ERD +R I G
Sbjct: 9 DKAQGDVVTIAPGSSVGEAAKTLSAKRIGALVVSSDG--TDIAGILSERDIVRAIGSGGP 66
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
V +MT +K+I+ D ++ + MT RH+PV+DG +VG+ISI DVV+
Sbjct: 67 GCLADPVESLMT--SKIISATRDESVEQVLGKMTQGRFRHMPVMDGAAMVGLISIGDVVK 124
Query: 187 AVVEQQKGELKRLNEFIRG 205
A + + E + L I+G
Sbjct: 125 AQLAELAMEKEALEGMIKG 143
>gi|421588842|ref|ZP_16034078.1| inosine-5`-monophosphate dehydrogenase [Rhizobium sp. Pop5]
gi|403706360|gb|EJZ21648.1| inosine-5`-monophosphate dehydrogenase [Rhizobium sp. Pop5]
Length = 144
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D V + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRDVV----TVGPNTTVAEAANVLSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ ++++MT +K+ + + M+LMT + RHVPV G++
Sbjct: 58 LVHAIAKHGKEGLDQPLSQVMT--SKVYRCHEETTVNELMELMTSRRFRHVPVESHGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|393769455|ref|ZP_10357977.1| signal-transduction protein [Methylobacterium sp. GXF4]
gi|392724926|gb|EIZ82269.1| signal-transduction protein [Methylobacterium sp. GXF4]
Length = 143
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++VA +L KG S + D T+E+ ++ +A+ IG+LVV +AGI +ER
Sbjct: 1 MTVARILAEKGS----SVVTVSPDKTLEEVIQILAEKRIGALVVAHA--DGSVAGIISER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + G + V++ MT + + T I M LMT+ RHVPV +GR+
Sbjct: 55 DIMRALARHGGATFDAPVSDHMTAD--VTTCGKSTTIEEVMGLMTEGRFRHVPVCENGRL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
G+ISI DVV + + E + L ++I
Sbjct: 113 AGLISIGDVVARRIATVEAEHQALRDYI 140
>gi|448309762|ref|ZP_21499616.1| signal transduction protein with CBS domains [Natronorubrum
bangense JCM 10635]
gi|445589300|gb|ELY43535.1| signal transduction protein with CBS domains [Natronorubrum
bangense JCM 10635]
Length = 146
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
G+ + D T+ D V+ M +GS++V+ E G+ ++RD +++ + + +
Sbjct: 9 GTVVTVEPDATLSDVVQTMRTEQVGSVIVVSADEP---LGLVSDRDLAFEVLAENGATRE 65
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
T VAEI++++ +T+P+DA + + LM+ K +R +PV+ DG +VG++S+ DVV
Sbjct: 66 TPVAEIVSED--FLTVPADAGVYDLVDLMSTKGVRRLPVVDDGDLVGIVSLSDVV 118
>gi|241663255|ref|YP_002981615.1| hypothetical protein Rpic12D_1660 [Ralstonia pickettii 12D]
gi|309782513|ref|ZP_07677237.1| CBS domain protein [Ralstonia sp. 5_7_47FAA]
gi|404396250|ref|ZP_10988045.1| hypothetical protein HMPREF0989_02298 [Ralstonia sp. 5_2_56FAA]
gi|240865282|gb|ACS62943.1| CBS domain containing protein [Ralstonia pickettii 12D]
gi|308918850|gb|EFP64523.1| CBS domain protein [Ralstonia sp. 5_7_47FAA]
gi|348614739|gb|EGY64278.1| hypothetical protein HMPREF0989_02298 [Ralstonia sp. 5_2_56FAA]
Length = 151
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + + ++ AV+ MA+ +IGSLVV++ GE + G+ T R
Sbjct: 1 MKVSDILHVKGN----TLYTVAPETKLQVAVQTMAEKDIGSLVVMEYGE---LVGMLTFR 53
Query: 117 DYLRKIV-GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR- 174
+ ++ + G T + ++M D T ++ N ++M + H+R++PV+D R
Sbjct: 54 EIIKVVAKNHGSVGDGTTIRKVMDDHPVTCTPETEVN--EVRRIMLEHHVRYLPVLDSRT 111
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++G+IS DV +AV+E Q E K L +IR
Sbjct: 112 LMGVISFYDVAKAVLEDQSFENKMLKAYIR 141
>gi|427426776|ref|ZP_18916822.1| CBS domain protein [Caenispirillum salinarum AK4]
gi|425884140|gb|EKV32814.1| CBS domain protein [Caenispirillum salinarum AK4]
Length = 145
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
RS TVE+A+K M + I +LV+ G + I GI ++R +R + QG +A+
Sbjct: 17 ARSTMTVEEAIKTMWELEISALVICDDG--RRIDGIVSDRGIIRALASQGTEIMGRPIAD 74
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQQKG 194
IMT E +IT I M MT++ IRH PV+DG ++ ++SI DVV+ ++Q
Sbjct: 75 IMTRE--VITCRPTDRINDIMAQMTERRIRHFPVVDGEGMLMALVSIGDVVKHRIDQIAN 132
Query: 195 ELKRLNEFI 203
+ + + E+I
Sbjct: 133 DAEHMREYI 141
>gi|284033677|ref|YP_003383608.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
gi|283812970|gb|ADB34809.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
Length = 139
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++ A LMT G + VG ++T+ DA + M ++GSL + GE + G+ T+R
Sbjct: 1 MTTARELMTPGAECVGE------NETLVDAARKMRDLDVGSLPIC--GEDNRLKGMLTDR 52
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
D + K + G P T+V E K +T+ +D +I A++ M + +R +PVIDG +
Sbjct: 53 DIVVKCLADGGDP--TQVTAGSLGEGKPVTIGADDSIEEALRTMAEHQVRRLPVIDGHDL 110
Query: 176 VGMISIVDVVRAVVEQQKG 194
VGM++ D+ R + ++ G
Sbjct: 111 VGMLAQADIAREMPDKAAG 129
>gi|126740209|ref|ZP_01755898.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126718664|gb|EBA15377.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 173
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFT 114
EN +V +++ D K S DDT+ AVK +A +IG+L+V + GI +
Sbjct: 30 ENATVRKLI----DHKGRSVFSITPDDTLSTAVKVLADKHIGALLVTD--ADGALVGILS 83
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DG 173
ERD +RK+ VAE MT + +L D ++ ++ MTD RH+PV+ DG
Sbjct: 84 ERDIVRKLAATPGQTLPQTVAENMTKNVQTCSL--DDQLVDVLKTMTDGRFRHIPVLEDG 141
Query: 174 RIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++ GM++I DVV + + + E +L + I G
Sbjct: 142 KLCGMLTIGDVVNYRLLELEYEAMQLKQMIVG 173
>gi|357022478|ref|ZP_09084705.1| CBS domain-containing protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356477923|gb|EHI11064.1| CBS domain-containing protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 277
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 78/132 (59%), Gaps = 16/132 (12%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ +D + +A + + ++ IG++V+ K G + GI T+RD + +G+G P T++
Sbjct: 1 MVLNPNDPILEAARAIEENRIGAVVIQKGG---RLVGIVTDRDLAVRALGRGLDPNTTKI 57
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVV-------- 185
AE+MT E+ + P D+ A++LM +++IR +P+++ R+VGM+++ D++
Sbjct: 58 AEVMT-ESPITLTPRDSTD-DAIRLMRERNIRRIPLVEHDRVVGMVTLDDLILDEAAPLE 115
Query: 186 --RAVVEQQKGE 195
A+VE Q GE
Sbjct: 116 ELAAIVEAQIGE 127
>gi|347530042|ref|YP_004836790.1| hypothetical protein SLG_36580 [Sphingobium sp. SYK-6]
gi|345138724|dbj|BAK68333.1| conserved hypothetical protein [Sphingobium sp. SYK-6]
Length = 142
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+V V +A+ IG + +++ G + GIF+ERD + + +G + V +MT
Sbjct: 21 DSVARVVALLAERRIGCVPIVEDG---RVLGIFSERDVVYGLAREGAALLDKPVEAVMT- 76
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRL 199
+T+ +D IL A+ LMT + IRH+P++ +GR++G +SI D+V++ +++ + E++ +
Sbjct: 77 -TPPVTIDADTPILSALSLMTRRRIRHLPIVREGRMIGFVSIGDLVKSRIDRIESEVEAM 135
Query: 200 NEFI 203
+I
Sbjct: 136 RSYI 139
>gi|125974837|ref|YP_001038747.1| signal-transduction protein [Clostridium thermocellum ATCC 27405]
gi|256004903|ref|ZP_05429876.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281418708|ref|ZP_06249727.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|385780279|ref|YP_005689444.1| signal transduction protein [Clostridium thermocellum DSM 1313]
gi|419722457|ref|ZP_14249600.1| CBS domain containing protein [Clostridium thermocellum AD2]
gi|419726592|ref|ZP_14253613.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|125715062|gb|ABN53554.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum ATCC 27405]
gi|255991083|gb|EEU01192.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281407792|gb|EFB38051.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|316941959|gb|ADU75993.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 1313]
gi|380769876|gb|EIC03775.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|380781469|gb|EIC11124.1| CBS domain containing protein [Clostridium thermocellum AD2]
Length = 142
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V +A + M +HN+GS+ P Q + GI T+RD + + V G++PK T+V ++MT
Sbjct: 19 SVVEAAQLMQKHNVGSI----PVYDQGVVGIVTDRDIVVRNVAHGKTPKDTKVQDVMT-- 72
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDV 184
+++ T+ D ++ +LM ++ IR VPV+ + ++VGM+S+ D+
Sbjct: 73 SQVTTVTPDMDVEEVTKLMANQQIRRVPVVENNQLVGMLSLGDI 116
>gi|375082622|ref|ZP_09729675.1| inosine-5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
gi|374742700|gb|EHR79085.1| inosine-5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
Length = 177
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R ++TVE K +A++ + S VV+ ++ I GI T+RD L K+V +G+ PK +++EI
Sbjct: 19 RPNETVEKVAKILARNKVSSAVVM---DKDEIIGIVTDRDILNKVVAKGKDPKEVKISEI 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
MT + IT+ D +I A++LM +K +R + V G +G ++ D++ AV
Sbjct: 76 MTKDP--ITIEYDYDIQDAIELMMEKGVRMLLVTKLGMPMGFVTAADLLAAV 125
>gi|332796755|ref|YP_004458255.1| signal-transduction protein with CBS domains [Acidianus hospitalis
W1]
gi|332694490|gb|AEE93957.1| putative signal-transduction protein with CBS domains [Acidianus
hospitalis W1]
Length = 131
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 9/109 (8%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+++ + M ++N+GS++V+ G+ GI TE+D +R + G G+ T+ EIMT
Sbjct: 21 TLKEVAEIMTKNNVGSVIVVDHGKP---IGIITEKDVVRGL-GNGKDLN-TKAEEIMT-- 73
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAV 188
LIT+ DA I A+ LM +IRH+PV+ DG++ G++SI DV RA+
Sbjct: 74 ASLITIREDAPITGALSLMRTNNIRHLPVVNEDGKLTGILSIRDVARAL 122
>gi|414162088|ref|ZP_11418335.1| hypothetical protein HMPREF9697_00236 [Afipia felis ATCC 53690]
gi|410879868|gb|EKS27708.1| hypothetical protein HMPREF9697_00236 [Afipia felis ATCC 53690]
Length = 142
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG + + ++D + DA++ + + +IG+++V+ HI GI +ER
Sbjct: 1 MTVQAILGTKGFEVI----SIQADAKMSDAIRMLTERHIGAVLVMNG---HHIDGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + +G S V+E+MT K++T M+ MT+ RH+PV++ R+
Sbjct: 54 DVVRVLGQRGASVLDAPVSEVMT--RKVVTCRRADTAALIMEKMTNGKFRHLPVVENDRV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI D+V+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDIVKWRVKEYEREQEALRDYIK 140
>gi|254453578|ref|ZP_05067015.1| CBS domain protein [Octadecabacter arcticus 238]
gi|198267984|gb|EDY92254.1| CBS domain protein [Octadecabacter arcticus 238]
Length = 145
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L +K G S V DA M+ IG++V+ G AGI +ERD
Sbjct: 3 VSQILKSKA---TGGVFTLTSYANVADAAAIMSDMRIGTIVISDDGGATP-AGILSERDI 58
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITL-PSDANILHAMQLMTDKHIRHVPVID-GRIV 176
+R++ QG S V+++MT +KL+T PSD + MT+ RH+PVID G++V
Sbjct: 59 VRELGKQGPSCMSRLVSDMMT--SKLVTCGPSDTTD-SVLAKMTEGRFRHMPVIDNGKMV 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI D V+A + + E L + G
Sbjct: 116 GLISIGDAVKARLSELAAERDALTGMVMG 144
>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
Length = 144
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++ +L KG D V T+ + + +++ IG++++++ + +AGI +ER
Sbjct: 1 MTIKRILEEKGRDVV----TLTPSVTLAEVAQVLSEKRIGAIILVE--DNGRLAGIVSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GR 174
D +R + +G V E MT K++T+ D +I AM+LMT+K RH+PV+D +
Sbjct: 55 DIVRVVAARGPDVLTQLVKEAMT--PKVVTVREDMSIDEAMRLMTEKRFRHLPVVDETEQ 112
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+VG +SI DVV+ + + + E + ++I
Sbjct: 113 LVGFVSIGDVVKRKISEAEAEASMMRDYI 141
>gi|20093964|ref|NP_613811.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
gi|19886923|gb|AAM01741.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
Length = 278
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
DTV AV+ M + +G+L ++K + + GI TERD + + TRV EIMT+
Sbjct: 100 DTVRKAVRTMFEFEVGALPIVK---DKKLVGIITERDIMADLYDVLED---TRVEEIMTE 153
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
+ + T+PSD +L A ++M D+ R +PV+ +GR+ G+++ DV+
Sbjct: 154 DPE--TVPSDITVLEAAEIMVDREFRRLPVVENGRLCGLVTATDVL 197
>gi|417110838|ref|ZP_11963847.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli CNPAF512]
gi|327188328|gb|EGE55546.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli CNPAF512]
Length = 144
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D V + + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRDVVTAG----PNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ + ++MT K+ + + M+LMT + RHVPV +G++
Sbjct: 58 LVHAIAKHGKDGLDQSLGQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESNGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|325964243|ref|YP_004242149.1| hypothetical protein Asphe3_29020 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470330|gb|ADX74015.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 143
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C R + ++ DA + M + GSL + G+ + G+ T+RD + K V GR P+
Sbjct: 14 CIRENQSLADAARMMLDLDCGSLPIC--GDDGKLHGMITDRDIVLKCVAAGRDPRDMMAR 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKG 194
E+ + K + +DAN+ A+++M +R +PVI D ++VG+IS D+ R EQ+ G
Sbjct: 72 ELAS--GKPYWIDADANVDAAIEMMETHQVRRLPVIADHKLVGIISQGDIARNYSEQRVG 129
Query: 195 EL-------KRLN 200
EL KR+N
Sbjct: 130 ELVEHISERKRMN 142
>gi|118591263|ref|ZP_01548662.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
gi|118436339|gb|EAV42981.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
Length = 122
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 88 KNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITL 147
+ +A+H IG++VV ++ + GI +ERD +R I QG S T V+ +MT ++T
Sbjct: 7 ETLAKHKIGAVVV--SDDEGAVNGIVSERDIVRVIGTQGVSALKTPVSSVMT--KTVVTC 62
Query: 148 PSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ NI M MT RH+PV+ DG++ G+ISI DVV+ + Q + E +++ +I
Sbjct: 63 TEENNINEVMAQMTQGRFRHMPVLKDGKLTGVISIGDVVKFKIAQVELEAEQMRSYI 119
>gi|403715685|ref|ZP_10941361.1| hypothetical protein KILIM_031_00160 [Kineosphaera limosa NBRC
100340]
gi|403210448|dbj|GAB96044.1| hypothetical protein KILIM_031_00160 [Kineosphaera limosa NBRC
100340]
Length = 137
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D TV D + +A+H IG+++V G I GI +ERD +R++ +G V+EIMT
Sbjct: 15 DQTVTDLLAVLAEHRIGAVIVSADGST--IDGIASERDIVRRLHDRGAEVLQAPVSEIMT 72
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
K+ T D I LMT + +RH+PV+ + + ++SI DVV+ +EQ + E
Sbjct: 73 --TKVHTCTDDDQIEAVAHLMTQQRVRHLPVVRETTLYSIVSIGDVVKFRIEQLQAERDH 130
Query: 199 LNEFIR 204
L E+I+
Sbjct: 131 LVEYIQ 136
>gi|239832140|ref|ZP_04680469.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444308290|ref|ZP_21143939.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
gi|239824407|gb|EEQ95975.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443488428|gb|ELT51181.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
Length = 143
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG D V DT+ AV + +H IG+LVV E I GI +ER
Sbjct: 1 MTVRSILETKGRDVV----VIAPADTLSHAVAMLNKHKIGALVVCD--EAGRIKGILSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R + Q VAE+MT K+ I M++MT RH+PV + G++
Sbjct: 55 DVVRAVAAQETKAMSMPVAEVMT--AKVQVCREHHTINQVMEIMTRSRFRHMPVEEGGKL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI DVV+ +E + E + + +I
Sbjct: 113 VGIVSIGDVVKRRIEDVEREAEDIRTYI 140
>gi|163793432|ref|ZP_02187407.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
gi|159181234|gb|EDP65749.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+V V+ M + IG++ V+ G + GIFTERD + ++V + P T V ++MT
Sbjct: 22 DSVRATVRLMTERRIGAVPVV--GPDGALVGIFTERDVMCRVVDRDLDPATTPVGQVMTA 79
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRL 199
K T D IL A++ M D RH+PV+D G+++ ++SI D+ AV + + ++ L
Sbjct: 80 SPKTAT--PDWPILKALEHMADGGYRHLPVVDNGKLLAIVSIRDLYAAVTGKLEDDILAL 137
Query: 200 NE 201
+
Sbjct: 138 SS 139
>gi|260428383|ref|ZP_05782362.1| CBS domain protein [Citreicella sp. SE45]
gi|260422875|gb|EEX16126.1| CBS domain protein [Citreicella sp. SE45]
Length = 173
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 8/153 (5%)
Query: 56 NISVAEVLMTKGDDKVGSWL-CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFT 114
N+S AE + +K G + D+T+ AV+ + IG+++V H+ GI +
Sbjct: 26 NLSAAEATVGHVMEKKGRDVHTIGPDETIGHAVEVLRDKRIGAILVTDAA--GHLVGILS 83
Query: 115 ERDYLRKIVGQ-GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-D 172
ERD +R++ GR+ T VAE+MT + + TL D ++ ++ MTD RH+PV+ D
Sbjct: 84 ERDIVRRLADTPGRTLPQT-VAELMTTDPQTCTL--DETLVRVLRRMTDGRFRHLPVLED 140
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G I GMISI DVV + + E +L + I G
Sbjct: 141 GEIAGMISIGDVVNYRLTALEYEALKLKQLIVG 173
>gi|86138810|ref|ZP_01057382.1| CBS domain protein [Roseobacter sp. MED193]
gi|85824457|gb|EAQ44660.1| CBS domain protein [Roseobacter sp. MED193]
Length = 144
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D +V DA ++ IG++VV G Q GI +ERD +R++ G V+ MT
Sbjct: 21 DASVADAAALLSDKGIGTVVVSSDG--QTADGILSERDIVRELGTSGSGCLQKPVSAYMT 78
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
KL+T S +N+ ++ MT+ RH+PV+ DG++VG++S+ DVV+A + + E
Sbjct: 79 --TKLVTCSSQSNVEDVLKQMTEGRFRHMPVVEDGKMVGLVSLGDVVKAQLAEIAMEKDA 136
Query: 199 LNEFIRG 205
L I G
Sbjct: 137 LAGMIMG 143
>gi|329888084|ref|ZP_08266682.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
gi|328846640|gb|EGF96202.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
Length = 142
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VAE+L KGD + D ++ DA + + +G+L+V + + G+ +ERD
Sbjct: 3 VAEILKGKGD----AVFTLVPDASLNDACAELERRQVGALIVC---QDASVVGVLSERDI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHA-MQLMTDKHIRHVPVI-DGRIV 176
+R I G V+ MT E + A + A M MTD+ IRH+PV+ D R+
Sbjct: 56 VRAISRDGPEALKRPVSHYMTSE---VVFADPAETVEALMARMTDRRIRHLPVLLDKRLA 112
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI DVV+ + Q E + L +I
Sbjct: 113 GVVSIGDVVKCQIAQATQEAESLRTYI 139
>gi|320449818|ref|YP_004201914.1| hypothetical protein TSC_c07380 [Thermus scotoductus SA-01]
gi|320149987|gb|ADW21365.1| CBS domain containing protein [Thermus scotoductus SA-01]
Length = 582
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
+ TVE+A + M + I SL+V + GI T+RD +++ +GR P T VAE+M
Sbjct: 151 ASATVEEAARRMREEGISSLLV-----EASPLGILTDRDLRNRVLAEGRPPT-TPVAEVM 204
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVV 185
T L TLP + I A+ M ++ I H+P+ +G ++VG+++ D++
Sbjct: 205 T--APLFTLPVETPIYEALAAMVERGIHHLPLTEGEKVVGVVTHTDIL 250
>gi|393720647|ref|ZP_10340574.1| signal-transduction protein [Sphingomonas echinoides ATCC 14820]
Length = 142
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L KG + + + +V DAV +A +G++ V+ E + GIF+ER
Sbjct: 1 MTIAAILGNKGRE----VISITAQHSVGDAVAVLATRRVGAVPVM---EGNRVVGIFSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D + I G V + MT +T P +A ++ A+ LMT + IRH+PV++G R+
Sbjct: 54 DVIHAIHAYGADAMARSVGDTMTAPPITVT-PGEA-VIGALSLMTRRRIRHLPVVEGDRV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G +SI D+V+ +++ + + + + +I+
Sbjct: 112 IGFVSIGDLVKYRIDRIEADAEAMRSYIQ 140
>gi|254490976|ref|ZP_05104158.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxidans DMS010]
gi|224463885|gb|EEF80152.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxydans DMS010]
Length = 149
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+++ AV M +H IGSLVV H+ GI +ERD L + + VA+ MT
Sbjct: 21 DSLDKAVNLMMEHRIGSLVVT--DYDGHLVGILSERDLLNILHQKHAMWSPVTVADAMTP 78
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRL 199
E + D + M +M D +IRH+PV+ ++ GM+SI D+V ++++ K E K L
Sbjct: 79 EPYVCE--PDNTLEEVMNIMVDNNIRHLPVVYKAKLEGMLSITDIVEELLKKAKFENKLL 136
Query: 200 NEFIRG 205
+I+
Sbjct: 137 KNYIQN 142
>gi|387129442|ref|YP_006292332.1| Inosine-5'-monophosphate dehydrogenase [Methylophaga sp. JAM7]
gi|386270731|gb|AFJ01645.1| Inosine-5'-monophosphate dehydrogenase [Methylophaga sp. JAM7]
Length = 150
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+++ AV M +H IGSLVV G + GI +ERD LR + + + + MT
Sbjct: 21 DSLDKAVNLMMEHRIGSLVVTHNGA---LVGILSERDLLRVLHQKHAMWQPLTAKDAMTP 77
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRL 199
+ T D + M LM + +IRH+PV+ GR+ GM+SI D+V ++++ K E K L
Sbjct: 78 DP--YTCEPDDTLEACMNLMVEHNIRHLPVVYQGRLEGMLSITDIVEELLKKAKFENKLL 135
Query: 200 NEFIRG 205
+I+
Sbjct: 136 KNYIQN 141
>gi|298291998|ref|YP_003693937.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296928509|gb|ADH89318.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 143
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ +A +A IG++VV P ++ + GI +ERD +R I G + V+ +MT
Sbjct: 22 TLREAATLLATKRIGAIVVTDP--ERRVVGIISERDVVRVIGNDGPARLDDPVSSVMT-- 77
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+K++T + + M+ MT RH+PV+ DG++VG+ISI DVV+ V + + E +L
Sbjct: 78 SKVVTCDGNETVHQIMESMTAGRFRHLPVVQDGKLVGIISIGDVVKHRVAEMERESHQLR 137
Query: 201 EFI 203
E+I
Sbjct: 138 EYI 140
>gi|302543446|ref|ZP_07295788.1| CBS domains protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461064|gb|EFL24157.1| CBS domains protein [Streptomyces himastatinicus ATCC 53653]
Length = 139
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 64 MTKGDDKV---GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
MTK D + W+ + + +E A + M ++G+L + Q+ + GI T+RD +
Sbjct: 1 MTKAADIMHPGAQWIP--ATENLERAAQLMRDLDVGALPI--SDSQERLCGILTDRDIVV 56
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGM 178
V QGR P ++ + I+ SDA++ ++ M D IR +PVID R+VGM
Sbjct: 57 GCVAQGRDPSRMTAGDLAKGTPRWIS--SDADVSEVLREMEDHRIRRLPVIDKNKRLVGM 114
Query: 179 ISIVDVVRAVVEQQKGEL 196
IS D+ R + EQQ GE
Sbjct: 115 ISEADLARHLSEQQIGEF 132
>gi|254467169|ref|ZP_05080580.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206688077|gb|EDZ48559.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ D +V DA + +A++ GS+VV G GI +ERD +R++ +G + V+
Sbjct: 19 KPDASVSDAARLLAENKFGSVVVSADGVTPD--GILSERDIVRELSKEGAACLDKPVSGY 76
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGEL 196
MT E L+T + +N+ ++ MT+ RH+PV+ DG++VG++++ D V+A + Q E
Sbjct: 77 MTRE--LVTCTTQSNVGELLKQMTEGRFRHMPVVEDGKLVGIVTLGDAVKAQLAQVAMEK 134
Query: 197 KRLNEFIRG 205
L + I G
Sbjct: 135 DALQDMIMG 143
>gi|148555441|ref|YP_001263023.1| signal-transduction protein [Sphingomonas wittichii RW1]
gi|148500631|gb|ABQ68885.1| putative signal-transduction protein with CBS domains [Sphingomonas
wittichii RW1]
Length = 143
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+++A +L +G++ S + D V +A+ +A IG++ V+ E++ + GI +ER
Sbjct: 1 MTIAAILQDRGEN---SIISVSLDMPVVEALALLADKRIGAVPVI---EREQVVGILSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D + + G + V E MT + +IT+ S L A+ +MT + IRH+PV+ DG +
Sbjct: 55 DMIYGMRRDGAAFLDRPVREAMT--SPVITVTSVTTPLEALAMMTRRRIRHLPVVDDGVL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG +SI D+V+A +E+ + E + E+I+
Sbjct: 113 VGFVSIGDLVKARMERIEQEAAAMREYIQ 141
>gi|307595012|ref|YP_003901329.1| putative CBS domain-containing signal transduction protein
[Vulcanisaeta distributa DSM 14429]
gi|307550213|gb|ADN50278.1| putative signal transduction protein with CBS domains [Vulcanisaeta
distributa DSM 14429]
Length = 157
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
+ + D + + +K M + NIGS++V E+ G+FTERD LR +V S
Sbjct: 14 LITVKDDKPLTEVIKIMNEKNIGSIIV--TDEEGRAIGVFTERDLLR-LVASNVSLNALT 70
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVD----VVRA 187
V ++MT +I + DA+++ A+ +M IRH+P++ DG+++G++SI D + R
Sbjct: 71 VGDVMT--RNVIVIEEDASLIKAVHIMAKHGIRHLPIVDEDGKVIGIVSIRDAAIALARL 128
Query: 188 VVEQQKGEL 196
+V+ G+L
Sbjct: 129 LVDMDIGKL 137
>gi|114569638|ref|YP_756318.1| signal-transduction protein [Maricaulis maris MCS10]
gi|114340100|gb|ABI65380.1| putative signal-transduction protein with CBS domains [Maricaulis
maris MCS10]
Length = 142
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 9/144 (6%)
Query: 62 VLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121
+L +KG D + R T+E+A + + H IG+L+V + G + IA + +ERD +R+
Sbjct: 6 ILRSKGRDVI----TIREMATLEEAARLLDSHAIGALLV-EDGAGRPIA-VLSERDLVRE 59
Query: 122 IVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMIS 180
+ G + VA+ +T + D + M LMT++ +RHVP+++G +++G+IS
Sbjct: 60 MALHGAACLQRPVAQALT--QAFVVAGRDIQLNALMVLMTERRVRHVPILEGEQLLGIIS 117
Query: 181 IVDVVRAVVEQQKGELKRLNEFIR 204
I DVV+A + + E L +IR
Sbjct: 118 IGDVVKAKIADMEAETAALQAYIR 141
>gi|383828361|ref|ZP_09983450.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora xinjiangensis XJ-54]
gi|383461014|gb|EID53104.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora xinjiangensis XJ-54]
Length = 138
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
+ +TV A + MA H+IG+L + GE H G+ T+RD + K++ +G+ P V E
Sbjct: 15 AETSETVSRAARTMASHDIGALPIR--GEDHHFKGMLTDRDIVVKVLAEGKDPAALHVGE 72
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKG 194
+ + + ++ D ++ A++ M++ +R +PV++G +VG++S DV R + E + G
Sbjct: 73 LA--QGVVYSVGPDDDVRDALREMSNHQVRRLPVMEGEELVGIVSQADVARKLPEGEVG 129
>gi|114766363|ref|ZP_01445345.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541396|gb|EAU44443.1| CBS domain protein [Roseovarius sp. HTCC2601]
Length = 149
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V ++L K DD V + TV +AV+ +A+ IG +V+ + G Q GI +ER
Sbjct: 6 MQVQQILKDKADDGV---VTVPPATTVAEAVRMLAERRIGGVVISEDG--QTPLGILSER 60
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + QG V +MT + T D+N++ A MT+ RH+PV+ +G +
Sbjct: 61 DIVRVLSAQGADVLTATVDALMTTNLQTCTRDEDSNVVLAR--MTEGRFRHMPVVEEGVM 118
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
VGMISI D+V A + + E + L I G
Sbjct: 119 VGMISIGDLVAAQIAELSMEKEALQGMIMG 148
>gi|452965016|gb|EME70046.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 146
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D +V DA + +A H IG+++V+ +AGI +ERD +R + RV ++MT
Sbjct: 22 DASVGDAARLLATHKIGAVLVMN---GDRVAGILSERDIVRGLADAVDVCITARVKDLMT 78
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELK 197
E + D + M++MT K IRH+PV+ +G + G+++I DVV++ +++ K E +
Sbjct: 79 AE--VFVCHEDDTVERLMEIMTAKRIRHLPVVNANGDVAGIVTIGDVVKSRLDETKMEAE 136
Query: 198 RLNEFI 203
L +++
Sbjct: 137 SLRDYV 142
>gi|386827482|ref|ZP_10114589.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
gi|386428366|gb|EIJ42194.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
Length = 144
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ A K M +H +G+++++ GI TERD LR + V ++MT +
Sbjct: 23 TMLAATKKMCEHYVGAVLIVSNAGLP--IGIVTERDVLRFCATRSTELDTVLVTDVMTKD 80
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLN 200
LI D I A+ +MT+K RH+P++D G+IVGM+S+ D+V+ +++ E K L
Sbjct: 81 --LIIGTFDTPIDEALTIMTEKKFRHIPIVDSGKIVGMVSLGDLVKIKLKETSVEAKHLR 138
Query: 201 EFI 203
++I
Sbjct: 139 DYI 141
>gi|407462210|ref|YP_006773527.1| signal-transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
gi|407045832|gb|AFS80585.1| signal-transduction protein [Candidatus Nitrosopumilus koreensis
AR1]
Length = 145
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L +++DA + M + N+G ++V + GI TERD++ K+ +GR P +T +
Sbjct: 15 LTAEKSTSLQDAAQEMNKLNVGCVIV---TDNSKPIGIITERDFVTKVAAEGR-PLFTEI 70
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
E+M+ + LIT+ D I A ++M + I +PV D +IVG+I+ D+VR
Sbjct: 71 GEVMS--SPLITISPDETIWEASEMMKENLIHKLPVKEDEQIVGVITTTDIVR 121
>gi|15899929|ref|NP_344534.1| hypothetical protein SSO3230 [Sulfolobus solfataricus P2]
gi|13816671|gb|AAK43324.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
Length = 156
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 9/114 (7%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
+++ + M +N+GS++V+ G+ GI TERD +R I G+G+S T EIMT
Sbjct: 50 LKEVTRIMTDNNVGSVIVVDNGKP---IGIITERDVVRAI-GKGKSLD-TIAEEIMT--A 102
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKG 194
LIT+ D+ I A+ LM +IRH+PVI DG + G+ISI D+ RA+ + +G
Sbjct: 103 SLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARAIDDILEG 156
>gi|84684721|ref|ZP_01012621.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667056|gb|EAQ13526.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 144
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L K + V L D +V DA +++ +G+++V + G H GI +ERD
Sbjct: 3 VSQILKDKANQGV---LTVTKDTSVADASAILSREKVGAVIVSEDG--VHPQGIVSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLI-TLPSDANILHAMQLMTDKHIRHVPVIDG-RIV 176
+R++ +G V+ IMT+ KLI +P D I +Q MT+ RH+PV+DG +V
Sbjct: 58 VRELGARGTGCLTDPVSAIMTE--KLIGCVPGDRAI-AVLQKMTEGRFRHMPVMDGDEMV 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G++SI DVV+A +E+ + + L I G
Sbjct: 115 GLVSIGDVVKARLEELGQQAESLKSMIMG 143
>gi|92117198|ref|YP_576927.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800092|gb|ABE62467.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 142
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L KG V D + AVK +++ IGS++V+ I GI +ER
Sbjct: 1 MTVCAILTAKGHQVVS----VEPDVKLAAAVKLLSERRIGSVLVMS---GTRIDGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + +G + V+ MT K+++ + H M++MT + RH+PV+ D R+
Sbjct: 54 DVVRALDERGAAALDEPVSAAMT--RKVVSCRLSDTVTHLMEIMTSERFRHLPVVEDDRL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG++SI DVV+ V++ + E + L ++I+
Sbjct: 112 VGLVSIGDVVKLRVQEYEAEQEALRDYIK 140
>gi|398786406|ref|ZP_10549147.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
gi|396993707|gb|EJJ04768.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
Length = 131
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C +++V A K MA+ +G+L + G + G+ T+RD + K++ + R P T+
Sbjct: 7 CIGLEESVVLAAKKMAELGVGALPIC--GGDNKLRGMLTDRDIVLKVLAREREPAATKAG 64
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKG 194
E+ + +++ + D + H ++ MT +R +PVIDG +VGM+++ DV R + + Q G
Sbjct: 65 ELA--QGEVVAIDVDDDTHHILRTMTAHKVRRLPVIDGNDLVGMVALADVARDLPDAQVG 122
Query: 195 EL 196
+L
Sbjct: 123 DL 124
>gi|315427081|dbj|BAJ48697.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|315427113|dbj|BAJ48728.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485746|dbj|BAJ51400.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 140
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 86 AVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLI 145
A K MA+ +GSLVV GE+ G+ TERD +R++V G SP+ T V ++MT + ++
Sbjct: 28 AAKIMAEEEVGSLVV-TVGEKP--VGVLTERDVVRRVVAAGLSPRRTSVEDVMT--SPVV 82
Query: 146 TLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+ + ++ A+ +M +R + V+ D ++VG++++ D+VRA+ E+ K +R
Sbjct: 83 VVGENTSLEEAVAIMASNRVRRLLVVRDEKLVGIVTVTDIVRALGEESA---KAAPAILR 139
Query: 205 G 205
G
Sbjct: 140 G 140
>gi|209963839|ref|YP_002296754.1| hypothetical protein RC1_0504 [Rhodospirillum centenum SW]
gi|209957305|gb|ACI97941.1| conserved domain protein [Rhodospirillum centenum SW]
Length = 144
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+ +L TKG + + R +TV V+ + + IG+ + + + IAGI +ERD
Sbjct: 3 VSAILRTKGS----AIITTRPSETVGSVVRLLTVNRIGAALAID--DDGGIAGIISERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
+R + G + +V+++MT K++ + M MT RH+PV++G R+VG
Sbjct: 57 VRGLGEHGAAVMERKVSDLMT--RKVVGCAPSDTVASVMTKMTSGRFRHLPVMEGGRLVG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI DVV+ +E+ E++ L +++ G
Sbjct: 115 FISIGDVVKHRLEETTQEVESLRQYVAG 142
>gi|240103611|ref|YP_002959920.1| hypothetical protein TGAM_1554 [Thermococcus gammatolerans EJ3]
gi|239911165|gb|ACS34056.1| Conserved hypothetical protein, containing CBS domains
[Thermococcus gammatolerans EJ3]
Length = 176
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 13/136 (9%)
Query: 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIF 113
+ ISV +++ K + + DDTV K +A++ +GS VV+ E I G+
Sbjct: 1 MAGISVGQIVKRKA-------IIVKPDDTVHKVAKILARNRVGSAVVV---ENDEIVGVV 50
Query: 114 TERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID- 172
T+RD L K+V +G+ PK +V +IMT +T+ D +I A+ M +K IR + V
Sbjct: 51 TDRDILDKVVAKGKDPKKVKVRDIMTQNP--VTIEDDYSISDAIDRMMEKGIRRLLVTRL 108
Query: 173 GRIVGMISIVDVVRAV 188
GR +G ++ D++ A+
Sbjct: 109 GRPIGFVTAADLLAAL 124
>gi|121610702|ref|YP_998509.1| XRE family transcriptional regulator [Verminephrobacter eiseniae
EF01-2]
gi|121555342|gb|ABM59491.1| putative transcriptional regulator, XRE family [Verminephrobacter
eiseniae EF01-2]
Length = 146
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V ++L KG+ + D+ + AV+ MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVTDILRVKGN----TLYTAAPDEPLAGAVELMAERDIGSLVVMESGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ +V S +V M + TL +D + ++M ++H R++PV++ + +
Sbjct: 54 EVIQAMVKNAGSVGSLQVRSAMNAAPLICTLETDMD--EVRRMMLERHARYMPVMEQKML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|398832504|ref|ZP_10590663.1| putative transcriptional regulator with C-terminal CBS domain
containing protein [Herbaspirillum sp. YR522]
gi|398223280|gb|EJN09630.1| putative transcriptional regulator with C-terminal CBS domain
containing protein [Herbaspirillum sp. YR522]
Length = 150
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ + +++AV MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSEILKVKGN----ILFTVTPETPIQEAVAAMAEKDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ L + G + V M D IT+ D ++ +LM ++H R+VPV++ + +
Sbjct: 54 EVLLALHKNGGALGGATVRRHMNDAP--ITVTPDTDLNEVRRLMLEQHARYVPVMEAKTV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AV++ Q E K L +IR
Sbjct: 112 LGVMSFYDVAKAVLDAQGFENKMLKAYIR 140
>gi|348670893|gb|EGZ10714.1| hypothetical protein PHYSODRAFT_563613 [Phytophthora sojae]
Length = 546
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 14/160 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDD--TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFT 114
+ A L+ K + L R +D TV +AV+ MA+ N G+++V+ ++Q + GIFT
Sbjct: 313 VVTAATLLKKKHKNIKLILNTRPEDNVTVAEAVEEMAKRNFGAVLVV--DKEQRVLGIFT 370
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--- 171
ERDY+RK++ + + P V ++M+ ++ + + + L + RH PVI
Sbjct: 371 ERDYIRKVLFELKDPTKLLVTDVMSSVGSVLQI--EDPLEKCWDLAATSNCRHFPVIGVM 428
Query: 172 ----DGRIVGMISIVDVVRAVVEQQKGELK-RLNEFIRGE 206
+ + G++SI D+VR + + RL EF++ +
Sbjct: 429 RQDREKELAGILSIKDIVREISKDHHATPGFRLMEFLKSK 468
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
W +TV DAV M + NIGSL+V + E I GI TERD L+KI + +
Sbjct: 117 WESIAGTETVHDAVLTMVERNIGSLIVTEAKE--GIVGIVTERDILKKISPRTVLSEEKF 174
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVG--------------MI 179
V ++M+ + ++ + ++ A+ MT ++IRH+ V++G + ++
Sbjct: 175 VHDVMS--SHIMCIHPSTTVIDALATMTKENIRHLAVVNGDMTSAVKRGSVQEEDMRCVL 232
Query: 180 SIVDVVRAVVE 190
SI D+VRA E
Sbjct: 233 SITDIVRAYAE 243
>gi|296119585|ref|ZP_06838143.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295967468|gb|EFG80735.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 618
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
D K+ C D ++ +A + M ++N+ SL+VL ++ + GI T+RD ++V +G
Sbjct: 156 DVKIAKPRSCPPDLSIREAAQRMEEYNVSSLLVL---DRDTLLGIITDRDLRGRVVAEGI 212
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVR 186
V+++MT KL+TL S++ + A+ LM+++ I H+PV+D G + G+++ D+ R
Sbjct: 213 E-TTCPVSDVMT--TKLLTLSSESLAMEALMLMSERKIHHLPVVDEGTVTGIVTQNDIAR 269
>gi|284173895|ref|ZP_06387864.1| hypothetical protein Ssol98_04450 [Sulfolobus solfataricus 98/2]
Length = 129
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
M +N+GS++V+ G+ GI TERD +R I G+G+S T EIMT LIT+
Sbjct: 30 MTDNNVGSVIVVDNGKP---IGIITERDVVRAI-GKGKSLD-TIAEEIMT--ASLITIKE 82
Query: 150 DANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKG 194
D+ I A+ LM +IRH+PVI DG + G+ISI D+ RA+ + +G
Sbjct: 83 DSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARAIDDILEG 129
>gi|330816657|ref|YP_004360362.1| Putative transcriptional regulator, XRE family protein
[Burkholderia gladioli BSR3]
gi|327369050|gb|AEA60406.1| Putative transcriptional regulator, XRE family protein
[Burkholderia gladioli BSR3]
Length = 156
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D + +AV MA+ +IGSLVV++ G+ + GI T R
Sbjct: 1 MRVSDILKVKGN----TLYTVTPDMPLREAVDTMAERDIGSLVVMEYGD---LVGILTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + ++ G + +V ++M D +T + ++ ++M ++H R++PV++ R++
Sbjct: 54 EIILRLKENGGAIGDVQVRKVMDDP---LTCTPETDVNEVRRMMLERHARYMPVLEKRVL 110
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS DV + VVE Q E + L +IR
Sbjct: 111 MGVISFYDVAKTVVEAQSFENRMLKAYIR 139
>gi|317126018|ref|YP_004100130.1| signal transduction protein with CBS domains [Intrasporangium
calvum DSM 43043]
gi|315590106|gb|ADU49403.1| putative signal transduction protein with CBS domains
[Intrasporangium calvum DSM 43043]
Length = 143
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++VL KGD+ + D+TV + +A+H IG+ VV G H+ GI +ERD
Sbjct: 3 ISDVLRHKGDE----VIVIAPDETVSTLLARLAEHGIGACVVSADG--THVDGIVSERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIV 176
+R + G + V+ IMT + T D L A MT+ +RHVP++D GR+
Sbjct: 57 VRHLHTSGPTILENSVSTIMTSDVTTGTAHDDVADLAAT--MTELRVRHVPILDADGRLS 114
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
++SI D+V+ + + + E +L ++I
Sbjct: 115 AIVSIGDIVKHRLSELQSERDQLRDYI 141
>gi|384433451|ref|YP_005642809.1| putative signal transduction protein [Sulfolobus solfataricus 98/2]
gi|261601605|gb|ACX91208.1| putative signal transduction protein with CBS domains [Sulfolobus
solfataricus 98/2]
Length = 132
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
M +N+GS++V+ G+ GI TERD +R I G+G+S T EIMT LIT+
Sbjct: 33 MTDNNVGSVIVVDNGKP---IGIITERDVVRAI-GKGKSLD-TIAEEIMT--ASLITIKE 85
Query: 150 DANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKG 194
D+ I A+ LM +IRH+PVI DG + G+ISI D+ RA+ + +G
Sbjct: 86 DSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARAIDDILEG 132
>gi|71908483|ref|YP_286070.1| CBS [Dechloromonas aromatica RCB]
gi|71848104|gb|AAZ47600.1| CBS protein [Dechloromonas aromatica RCB]
Length = 146
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V A + M IG+L+V++ G IAGIFTERD L KI+ P T + ++M +
Sbjct: 23 SVRSACRLMTDKKIGALLVVENG---RIAGIFTERDALNKILSAALDPDATTLDQVMVRD 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKGELKRL 199
+ T+ +D + +A+ +M + RHVPV+D G +GM+S D + + + E+K L
Sbjct: 80 PQ--TIGADKPLSYALYMMAEGGFRHVPVVDPSGAPLGMVSARDALGQDMVDLEREMKHL 137
Query: 200 NEF 202
E
Sbjct: 138 EEL 140
>gi|379056761|ref|ZP_09847287.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Serinicoccus profundi MCCC 1A05965]
Length = 617
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV + + M + + SL+V+ E + GI T+RD R+++ G + T V E+MT +
Sbjct: 172 TVAEGARVMTRAGVSSLLVM---EGDALVGIVTDRDLRRRVLAAGLAAD-TPVGEVMTRD 227
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
+TLP+ A L AM MT ++I H+PV+ DGR++G+++ D+VR
Sbjct: 228 P--VTLPARALALEAMLEMTGRNIHHLPVLEDGRVLGLVTTTDLVR 271
>gi|254169264|ref|ZP_04876097.1| CBS domain pair protein [Aciduliprofundum boonei T469]
gi|197621801|gb|EDY34383.1| CBS domain pair protein [Aciduliprofundum boonei T469]
Length = 185
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 26/168 (15%)
Query: 52 KGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAG 111
+ +++I+V EV M+K V L TVE+ K + I +L++ G+ G
Sbjct: 3 RAMKSITVEEV-MSKNPRIVSGEL------TVEEGAKILKDLGISTLIIEDDGKP---VG 52
Query: 112 IFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI 171
I T+RD++ KI+ +G P T++ +IM+ +I +P N+ A ++MT + IR +PVI
Sbjct: 53 IVTDRDFVTKIIAEGLPPS-TKLRDIMS--TPIIMIPHKENLEDAAKIMTRRKIRKLPVI 109
Query: 172 -DGRIVGMISIVDVVR------------AVVEQQKGELKRLNEFIRGE 206
D +IVG++S D+ R A + Q+ E +++ E+I G+
Sbjct: 110 KDDKIVGILSENDIARISPDLIALAQEYANIHQENSEKEKMEEYIAGK 157
>gi|221066072|ref|ZP_03542177.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|264679380|ref|YP_003279287.1| XRE family transcriptional regulator [Comamonas testosteroni CNB-2]
gi|299530463|ref|ZP_07043883.1| putative transcriptional regulator, XRE family protein [Comamonas
testosteroni S44]
gi|418530391|ref|ZP_13096315.1| XRE family transcriptional regulator [Comamonas testosteroni ATCC
11996]
gi|220711095|gb|EED66463.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|262209893|gb|ACY33991.1| putative transcriptional regulator, XRE family [Comamonas
testosteroni CNB-2]
gi|298721439|gb|EFI62376.1| putative transcriptional regulator, XRE family protein [Comamonas
testosteroni S44]
gi|371452511|gb|EHN65539.1| XRE family transcriptional regulator [Comamonas testosteroni ATCC
11996]
Length = 150
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+++ AV+ M++ +IGSLVV+ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTVSPDESLAAAVQVMSEKDIGSLVVMDHGD---VVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ V G + V M D T+ +D + + M L D+H R++PV+D R +
Sbjct: 54 EVIQGFVKTGGVENIS-VRGAMDDAPMTCTMETDMDEVRRMML--DRHARYMPVMDKRML 110
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS+ DV +AVV+ Q E + L +IR
Sbjct: 111 MGVISLYDVAKAVVDSQNFENRMLKAYIR 139
>gi|335036447|ref|ZP_08529774.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
gi|333792338|gb|EGL63708.1| hypothetical protein AGRO_3780 [Agrobacterium sp. ATCC 31749]
Length = 144
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L KG D V D ++ +A + H IGS+VV + GIFTERD
Sbjct: 5 VKDLLDRKGRDVV----TVGPDVSIGEAAGTLHAHKIGSVVVTDA--DGVVLGIFTERDL 58
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVG 177
++ + GQG + V+ MT ++ ++ M++MT RHVPV +GR+ G
Sbjct: 59 VKAVAGQGAASLQQSVSVAMT--KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAG 116
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ISI DVV+A + + + E + + +I G
Sbjct: 117 IISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|227831149|ref|YP_002832929.1| hypothetical protein LS215_2299 [Sulfolobus islandicus L.S.2.15]
gi|229580034|ref|YP_002838434.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
Y.G.57.14]
gi|229581305|ref|YP_002839704.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus Y.N.15.51]
gi|284998647|ref|YP_003420415.1| hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|227457597|gb|ACP36284.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
gi|228010750|gb|ACP46512.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus Y.G.57.14]
gi|228012021|gb|ACP47782.1| putative signal-transduction protein with CBS domains [Sulfolobus
islandicus Y.N.15.51]
gi|284446543|gb|ADB88045.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
Length = 129
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
M +N+GS++V+ G+ GI TERD +R I G+G+S + EIMT LIT+
Sbjct: 30 MTDNNVGSVIVVDNGKP---IGIITERDVVRAI-GKGKSLD-VKAEEIMT--ASLITIKE 82
Query: 150 DANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKG 194
D+ I A+ LM +IRH+PVI DG + G+ISI D+ RA+ + +G
Sbjct: 83 DSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARAIDDILEG 129
>gi|374855292|dbj|BAL58153.1| CBS domain containing protein [uncultured Acidobacteria bacterium]
Length = 170
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
DD V A+ M QH IGS++V++ G+ + GIFTER L ++VG K R+ E+M
Sbjct: 58 PDDPVGRALDLMRQHRIGSVLVVEGGK---LVGIFTERGALLQLVGTSADVKTLRMREVM 114
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAV 188
T + + L D + A+ M+ R +PV+ DGR VG++SI D++R +
Sbjct: 115 TPDP--VVLHEDDTLAFALHQMSIGEFRRLPVVRSDGRPVGVVSIKDILRYI 164
>gi|118474014|ref|YP_888834.1| hypothetical protein MSMEG_4564 [Mycobacterium smegmatis str. MC2
155]
gi|399988850|ref|YP_006569200.1| signal-transduction protein with CBS domains [Mycobacterium
smegmatis str. MC2 155]
gi|118175301|gb|ABK76197.1| CBS domain protein [Mycobacterium smegmatis str. MC2 155]
gi|399233412|gb|AFP40905.1| Putative signal-transduction protein with CBS domains
[Mycobacterium smegmatis str. MC2 155]
Length = 143
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVL-KPGEQQHIAGIFTERD 117
+A+VL KG + + TV + + +A+ NIG++VV+ K G + GI +ERD
Sbjct: 3 IADVLKNKGT----AVVTISPQATVTELLAGLAEMNIGAMVVMGKSG----LEGIVSERD 54
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIV 176
+R++ +G S V+ IMT T + L+ LMT +RH+PV+D GR+
Sbjct: 55 VVRQLHKRGSSLLAQPVSSIMTSVVATCTPRDTVDRLNV--LMTQNRVRHIPVLDDGRLA 112
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI DVV+ +E+ + E ++L +I
Sbjct: 113 GIVSIGDVVKTRMEELETEQQQLQAYI 139
>gi|389851632|ref|YP_006353866.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. ST04]
gi|388248938|gb|AFK21791.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. ST04]
Length = 178
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
DDTV + ++++ +GS VV+ E+ I GI TERD L K+V +G+ P+ RV EIM
Sbjct: 20 PDDTVHKVARVLSRNKVGSAVVM---EKDEILGIITERDILDKVVAKGKDPRQVRVREIM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMIS 180
T + I + D ++ A+++MT+K +R + V G+ +G ++
Sbjct: 77 TKDP--IKIEYDYDVQDAIEVMTEKGVRRILVTKFGKPIGFVT 117
>gi|298714699|emb|CBJ27624.1| myosin 29 [Ectocarpus siliculosus]
Length = 3170
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 80/140 (57%), Gaps = 14/140 (10%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
++S+AE+L KG+ ++ +DD+ A K +A+ LVV G +AGIFTE
Sbjct: 1674 SLSLAELLKLKGEPQL-----VFADDSARGAGKAIARGRKAVLVVDNGG----LAGIFTE 1724
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--- 172
+D L +++ +G +P V ++MT T+ S +L A+Q M + H+PV+D
Sbjct: 1725 KDMLNRVLSKGINPDEVSVEDVMTPNPD--TVSSTMTVLEALQEMHENKYLHLPVVDEDS 1782
Query: 173 GRIVGMISIVDVVRAVVEQQ 192
G ++G++S++++++A ++
Sbjct: 1783 GNVLGVVSVMEIIQATAGEE 1802
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
LC D TV K MA+ + ++L G+ + G+ T+ D RK+VG+ P T V
Sbjct: 2265 LCLSVDLTVAQVAKRMAEIRTDAAILL--GQMGDMKGVLTDHDIARKVVGRSLDPSRTPV 2322
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIV 182
+ +MT + +T + N + A++ M + H RH+PV+ +G + GM++I
Sbjct: 2323 SSVMTPDPIWVT--TTDNAMDALETMLETHSRHLPVVSEEGAVSGMLNIA 2370
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 10/191 (5%)
Query: 10 TCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVAEVLMTKGDD 69
T + G+I R V KT R S++SS ++ + V M K
Sbjct: 1825 TSSQASMGSIGTRASARVGVGRGKTSPRVAMTPSAASSVRGKEPPKKTDSRPVSMLKPKP 1884
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
LC S +V + K MA + ++L + H+ GI +++D R++V P
Sbjct: 1885 P----LCLPSTVSVLEVAKKMADVRTDAAILLD--NKGHLEGIISDQDVARRVVANRLDP 1938
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
T V+E+MT ++ + A + + +M +K RH+PVID G + G++SI +
Sbjct: 1939 SSTTVSEVMTPHPTIVHMADSA--MECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYD 1996
Query: 188 VVEQQKGELKR 198
+++ K + R
Sbjct: 1997 AIQRLKKKAAR 2007
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 15/155 (9%)
Query: 41 VISSSSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVV 100
+++ + S TE +G N ++A+VL +K + R TV +A +A LVV
Sbjct: 2797 MLAMTGSETEREGT-NQTLADVLASKDKPEF-----VRPRHTVREAASVIASQKKAVLVV 2850
Query: 101 LKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLM 160
E+ +AGIFT +D + +++ + +P T V +MT N PS ++ A+Q M
Sbjct: 2851 ----EEGELAGIFTPKDMMNRVITKKLNPGTTAVFSVMT-PNPDGADPS-MTVVEALQQM 2904
Query: 161 TDKHIRHVPVID---GRIVGMISIVDVVRAVVEQQ 192
+ H+PV+D G ++G++ ++++V+A V Q+
Sbjct: 2905 CENRYLHLPVVDERSGAVLGVVDVMEIVQATVGQE 2939
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 97 SLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHA 156
+++VL+ G +AGI T +D L ++V +G P T V+ +MT + P ++ A
Sbjct: 2473 AVLVLRNG---RLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPDAV--PPAMTVIEA 2527
Query: 157 MQLMTDKHIRHVPVID---GRIVGMISIVDVVRAVV 189
++ M + H+PV+D G ++G++S+++++ A
Sbjct: 2528 LREMHENKYLHLPVVDEDSGNVLGVVSVMEIIHATA 2563
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
SD +V + M+ + ++ K G + GI T+ D R+++ P T V +IM
Sbjct: 2634 SDGSVLEVATEMSLKRTDAALLTKRG---RVVGIVTDHDLTRRVIALDMPPDRTPVRDIM 2690
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIV 182
T E ++++ D + + A+ LM RH+PV+D G+I G++ I
Sbjct: 2691 TAEPAMVSM--DESAMEALGLMIQNKTRHLPVMDAQGKIGGLLDIA 2734
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ GI T D +R++V P T +E+MT T+ S+ + + A+ +M +H RH+
Sbjct: 1535 MTGIITAIDCIRRVVAVSVDPNSTAASEVMTPNP--TTVLSEDSAMEALSIMLGRHFRHL 1592
Query: 169 PV--IDGRIVGMISIVDVVRAVVEQQKGELKR 198
PV G + G++ I + V + + KR
Sbjct: 1593 PVRTPRGDVTGILDIAKCLYDAVSRLQRTAKR 1624
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 105 EQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKH 164
+Q +AGI T +D L ++V + P T V+ IMT T+P + + A+ M +
Sbjct: 2101 DQGRLAGILTPKDVLMRVVAKELDPDRTPVSSIMTPNPD--TVPPEMTAVEALGEMHENK 2158
Query: 165 IRHVPVID 172
H+PV+D
Sbjct: 2159 YLHLPVVD 2166
>gi|390962098|ref|YP_006425932.1| hypothetical protein CL1_1943 [Thermococcus sp. CL1]
gi|390520406|gb|AFL96138.1| hypothetical protein CL1_1943 [Thermococcus sp. CL1]
Length = 135
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+D+V+ A + M + +IGSLVV+ G + G FT+ D +R++V G P T V EIM+
Sbjct: 21 EDSVKRACEVMVEFDIGSLVVVDSG---RVVGFFTKSDVIRRVVIPGL-PNTTPVREIMS 76
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRA 187
DE LIT+ S+ + + LM K I+HV V + G IVG+ S+ D++ A
Sbjct: 77 DE--LITVDSNTPLREVLDLMAKKGIKHVLVEEGGEIVGIFSLSDLLAA 123
>gi|167631117|ref|YP_001681616.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
gi|167593857|gb|ABZ85605.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
Length = 142
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
S R D+T+ +A K M + N+G++ V+ E Q GI T+RD + ++V +G P+ T
Sbjct: 11 SVSAVRPDETIIEAAKIMMRLNVGAVPVV---EGQKCVGIITDRDIVLRVVAKGMDPRGT 67
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDV 184
+ MT + IT D +I A LM+D+ IR +P+I+ R+VG++S+ D+
Sbjct: 68 TIQSAMTKDP--ITGTPDMDIHAAADLMSDRQIRRLPIIENDRLVGIVSLGDL 118
>gi|134298322|ref|YP_001111818.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
gi|134051022|gb|ABO48993.1| putative signal-transduction protein with CBS domains
[Desulfotomaculum reducens MI-1]
Length = 145
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++++A + M+QHN+GS+ V++ G + GI T+RD + V QG++P T V +MT
Sbjct: 21 SIQEATQLMSQHNVGSIPVVENG---NCVGIVTDRDIALRAVSQGQNPSSTTVQSVMT-- 75
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDV 184
+ ++T + ++ A LM ++ +R +PV+ +G I GM+++ D+
Sbjct: 76 SGVVTGSPEMDVHEAANLMAERQVRRLPVVENGSITGMVALGDL 119
>gi|453072327|ref|ZP_21975453.1| hypothetical protein G418_26273 [Rhodococcus qingshengii BKS 20-40]
gi|452757790|gb|EME16191.1| hypothetical protein G418_26273 [Rhodococcus qingshengii BKS 20-40]
Length = 142
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A++L KG+ S + + TV + ++A+HNIG++VV+ + GI +ERD
Sbjct: 3 IADILRNKGN----SIVTIDAHTTVNGLLCDLARHNIGAMVVVD---DDAVVGIISERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ +G +V+E+MT +P+DA + +MT++ IRH+PVI DG ++G
Sbjct: 56 VRRLHERGPDLLGIQVSEVMT-ALMYTCVPADA-VDSIAAIMTERRIRHLPVIEDGNLLG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ +++ K E +L +I
Sbjct: 114 IVSIGDVVKSRIDELKSERDQLESYI 139
>gi|330507966|ref|YP_004384394.1| CBS domain-containing protein [Methanosaeta concilii GP6]
gi|328928774|gb|AEB68576.1| CBS domain protein [Methanosaeta concilii GP6]
Length = 184
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
+D V A K M N+GSL+++ + GI TERD +RK++ QG P+ +V EIM
Sbjct: 20 ADLDVLSAAKRMGSANVGSLIIVS---RDKTTGILTERDLVRKVIAQGVDPRNLKVREIM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
+ + + + DA+I A LM ++ +PVI G+++G+I+ D+V
Sbjct: 77 S--SPVTAIEPDASIRDAANLMLRAGVKRLPVILKGKLMGIITDTDLV 122
>gi|386828070|ref|ZP_10115177.1| isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[Beggiatoa alba B18LD]
gi|386428954|gb|EIJ42782.1| isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[Beggiatoa alba B18LD]
Length = 587
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 65 TKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124
T GD + + + VE+A+ M +H+I SL+V + + GI T++D L KI+
Sbjct: 459 TVGDIMIANLISIDGSTVVEEAMHLMRKHHISSLIVNPDADGKW--GIMTQKDVLTKIIH 516
Query: 125 QGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVD 183
RSP +VAE+ T L +P D ++ + +MTD +IR V V DG +G++S D
Sbjct: 517 ANRSPASVKVAEVTT--KPLQMVPVDTSLHDCVSIMTDNNIRRVVVEKDGAPIGIVSDTD 574
Query: 184 VVRAVVE 190
V R V E
Sbjct: 575 VFRTVEE 581
>gi|427421844|ref|ZP_18912027.1| CBS domain-containing protein [Leptolyngbya sp. PCC 7375]
gi|425757721|gb|EKU98575.1| CBS domain-containing protein [Leptolyngbya sp. PCC 7375]
Length = 182
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +AV+ M + +L+V + E G+ TE D + K+ G +PK RV EIMT
Sbjct: 20 TVAEAVELMKNKGLRALIVDRRNEDDPY-GMVTETDIVYKVAAYGHNPKEMRVFEIMT-- 76
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMISIVDVV 185
I +P D + + +L T+ IR PV+ GR++G+IS+ D++
Sbjct: 77 KPCIVVPPDLGVEYVARLFTNTKIRRAPVVQGRLMGIISVSDIL 120
>gi|327401358|ref|YP_004342197.1| signal transduction protein [Archaeoglobus veneficus SNP6]
gi|327316866|gb|AEA47482.1| putative signal transduction protein with CBS domains
[Archaeoglobus veneficus SNP6]
Length = 180
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D+T+ A K M + +GS+VV+ E GI TE+D L K+V + R+P ++ EIM+
Sbjct: 21 DETLFSAAKRMLEFGVGSIVVV---EDHKPLGIVTEKDILEKVVAKNRTPSEVKLKEIMS 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
LIT+ ++ A +M + IR +PVI DG ++G+++ D++
Sbjct: 78 --YPLITIKPTTSVREAADIMLKRGIRRLPVIDDGDLIGIVTDTDIL 122
>gi|261418831|ref|YP_003252513.1| hypothetical protein GYMC61_1387 [Geobacillus sp. Y412MC61]
gi|319765647|ref|YP_004131148.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261375288|gb|ACX78031.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
gi|317110513|gb|ADU93005.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
Length = 148
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ TV++A + M+Q NIG+L V++ G+ + G+ T+RD ++ QG+ P +VAE+MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDV 184
N+++T + N+ A +M +R +P++ + ++ G++++ D+
Sbjct: 80 --NQVVTGTPNMNVQEAANVMAQHQVRRLPIVENNQLQGIVALGDI 123
>gi|315230762|ref|YP_004071198.1| inosine-5'-monophosphate dehydrogenase like protein [Thermococcus
barophilus MP]
gi|315183790|gb|ADT83975.1| inosine-5'-monophosphate dehydrogenase like protein [Thermococcus
barophilus MP]
Length = 179
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 13/128 (10%)
Query: 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIF 113
+ I+V +VL K + + +DTV+ K +A++ + S V++ E I GI
Sbjct: 2 MPKITVEQVLKRKA-------VVVKPEDTVDKVAKILAKNKVSSAVIV---ENDEIIGIV 51
Query: 114 TERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID- 172
T+RD L KIV +G++PK+ +V EIMT + + D +I A++LM DK +R + V
Sbjct: 52 TDRDILDKIVAKGKNPKHIKVREIMTKNP--VRIEYDYDIQDAIELMMDKGVRRILVTKL 109
Query: 173 GRIVGMIS 180
G+ +G ++
Sbjct: 110 GKPIGFVT 117
>gi|146303554|ref|YP_001190870.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
gi|145701804|gb|ABP94946.1| putative signal-transduction protein with CBS domains
[Metallosphaera sedula DSM 5348]
Length = 164
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ D + A M HN+GS++V+ E+ + GI TERD +R + + K V +
Sbjct: 17 KESDNITAAAMEMKNHNMGSMMVVN--EKNQVVGIITERDMVRALADKRLDAK---VKDY 71
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQ 192
MT+ K +T D + A+ +M + RH+P+I DG+I+G++SI D+ RA+ +
Sbjct: 72 MTESVKGVT--EDTTVEEALNIMLENGFRHLPIIGKDGKIMGIVSIRDLARALADSH 126
>gi|119715931|ref|YP_922896.1| hypothetical protein Noca_1696 [Nocardioides sp. JS614]
gi|119536592|gb|ABL81209.1| CBS domain containing protein [Nocardioides sp. JS614]
Length = 143
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V + + +A+HN+G+L+V G + GI +ERD +R + G T V IMT
Sbjct: 21 DAGVRELIAKLAEHNVGALIVSSDGTS--VDGIVSERDVVRHLHSDGTVINNT-VQAIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+ T + + M+ MT++ +RHVPV++ GR+VG+ISI DVV+ ++Q + E +
Sbjct: 78 --TVVQTCDQETQVDELMKTMTERRVRHVPVVEGGRLVGIISIGDVVKHRIDQLEFERDQ 135
Query: 199 LNEFI 203
L+ ++
Sbjct: 136 LDSYV 140
>gi|406922552|gb|EKD60005.1| cbs [uncultured bacterium]
Length = 139
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+S TV A + N+G+++VLK GE + G+ +ERD +RK +GQ R T V EI
Sbjct: 19 QSGATVRQACHVLDHFNVGAVLVLK-GEA--LVGLVSERDVIRKCIGQDRHSDSTLVDEI 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
MT + K + N A+ MT H RH+PV++ GR +G++SI DV
Sbjct: 76 MTVDPKTVQASDGLN--DALAHMTQGHFRHMPVLEAGRCIGLLSIRDV 121
>gi|254169303|ref|ZP_04876134.1| CBS domain pair protein [Aciduliprofundum boonei T469]
gi|289595892|ref|YP_003482588.1| signal transduction protein with CBS domains [Aciduliprofundum
boonei T469]
gi|197621724|gb|EDY34308.1| CBS domain pair protein [Aciduliprofundum boonei T469]
gi|289533679|gb|ADD08026.1| putative signal transduction protein with CBS domains
[Aciduliprofundum boonei T469]
Length = 207
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 26/168 (15%)
Query: 52 KGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAG 111
+ +++I+V EV M++ V L TVE+ K + I +L++ + G+ G
Sbjct: 25 RAMKSITVEEV-MSRNPRIVSGEL------TVEEGAKILKDLGISTLIIEEEGKP---VG 74
Query: 112 IFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI 171
I T+RD++ KI+ +G P T++ +IM+ +I +P N+ A ++MT + IR +PVI
Sbjct: 75 IVTDRDFVTKIIAEGLPPS-TKLRDIMS--TPIIMIPHKENLEDAAKIMTRRKIRKLPVI 131
Query: 172 -DGRIVGMISIVDVVR------------AVVEQQKGELKRLNEFIRGE 206
D +IVG++S D+ R A + Q+ E +++ E+I G+
Sbjct: 132 KDDKIVGILSENDIARISPDLIALAQEYANIHQENSEKEKMEEYIAGK 179
>gi|261403128|ref|YP_003247352.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261370121|gb|ACX72870.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 194
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ + D +V D M +HNIG++V++ E GI TERD ++++V + PK
Sbjct: 18 ITAKKDMSVYDIANIMTEHNIGAVVIV---EDNKPVGILTERDIVKRVVSKNLKPKEVLA 74
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
E+M+ K+IT+ +A+I A ++M ++ +PV+ DG ++G+I+ D+++
Sbjct: 75 EEVMS--KKIITIHQNASITEAAKIMAKYGVKRLPVVKDGNLMGIITQSDIIK 125
>gi|226185216|dbj|BAH33320.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 143
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A++L KG+ S + + TV + ++A+HNIG++VV+ + GI +ERD
Sbjct: 4 IADILRNKGN----SIVTIDAHTTVNGLLCDLARHNIGAMVVVD---DDAVVGIISERDV 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ +G +V+E+MT +P+DA + +MT++ IRH+PVI DG ++G
Sbjct: 57 VRRLHERGPDLLGIQVSEVMT-ALMYTCVPADA-VDSIAAIMTERRIRHLPVIEDGNLLG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ +++ K E +L +I
Sbjct: 115 IVSIGDVVKSRIDELKSERDQLESYI 140
>gi|395762709|ref|ZP_10443378.1| inosine-5'-monophosphate dehydrogenase [Janthinobacterium lividum
PAMC 25724]
gi|71726102|gb|AAZ39225.1| hypothetical protein [Janthinobacterium lividum]
Length = 148
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 22/155 (14%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ D + DA MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSEILQVKGN----ILYTVTPDQPLLDAANTMAEKDIGSLVVMEFGD---LVGMLTFR 53
Query: 117 DYLRKI------VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV 170
+ L + +G G K+ ++ IT+ D + ++M +KH R++PV
Sbjct: 54 EVLNALHENAGQIGGGTVRKHM--------DDHPITVTPDTEVNEVRRIMLEKHARYLPV 105
Query: 171 IDGR-IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
++ + ++G+IS DV RAV+E Q E + L +IR
Sbjct: 106 MNAKTLLGVISFYDVARAVLEAQSFENQMLKAYIR 140
>gi|348618498|ref|ZP_08885022.1| conserved hypothetical protein [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816223|emb|CCD29778.1| conserved hypothetical protein [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 156
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+D+V+ A + M N+GS+VV+ QQH GI T+RD + ++V + P VA+IM+
Sbjct: 25 EDSVQKAAQKMRDRNVGSIVVVNA--QQHPVGIVTDRDIVVQVVAKSADPSSQTVADIMS 82
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
L+ L + ++ A + M +K +R PV+D G + G+I++ DV+
Sbjct: 83 --RDLLILRASDSLQEAARRMDEKCVRRAPVVDEQGALCGLIALDDVL 128
>gi|301631001|ref|XP_002944601.1| PREDICTED: uncharacterized protein At5g10860, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 152
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV+ MA+ +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTAHPDEHLVQAVQTMAERDIGSLVVMEYGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + G S TRV M D T+ +D + + M L H R++PV++ R +
Sbjct: 54 EINLVLARNGGSVGTTRVRSAMDDAPLTCTMETDMDEVRRMML--GCHARYMPVMENRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AVV+ Q E + L +IR
Sbjct: 112 MGVVSFYDVAKAVVDSQNFENRLLKAYIR 140
>gi|190891883|ref|YP_001978425.1| inosine-5'-monophosphate dehydrogenase [Rhizobium etli CIAT 652]
gi|218509495|ref|ZP_03507373.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli Brasil 5]
gi|190697162|gb|ACE91247.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
etli CIAT 652]
Length = 144
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
SV +L KG D V + + TV +A +++ IG++VV+ G + I+G+FTERD
Sbjct: 4 SVKAILDLKGRDVVTAG----PNTTVAEAAVILSKKKIGAIVVV--GMENRISGMFTERD 57
Query: 118 YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIV 176
+ I G+ + ++MT K+ + + M+LMT + RHVPV G++
Sbjct: 58 LVHAIAKHGKDGLDQSLGQVMT--AKVYRCHEETTVNELMELMTSRRFRHVPVESHGKLA 115
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIRG 205
G+ISI DVV++ + + + E + + +I G
Sbjct: 116 GIISIGDVVKSRIAEVEREAEDIKAYIAG 144
>gi|418935365|ref|ZP_13489141.1| putative signal transduction protein with CBS domain-containing
protein [Rhizobium sp. PDO1-076]
gi|375057919|gb|EHS54067.1| putative signal transduction protein with CBS domain-containing
protein [Rhizobium sp. PDO1-076]
Length = 144
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ +A + ++ IG++VV+ G + I GIFTERD +R I GR ++ +MT
Sbjct: 24 TLGEAAHILEENKIGAVVVV--GMENRIVGIFTERDVVRAIGQNGRDAFDQPISTLMT-- 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLN 200
+ D ++ M+LM+ + RHVPV D G++ G+ISI DVV++ + + + E +++
Sbjct: 80 ANVYRCREDTSVNELMELMSARRFRHVPVEDNGKLSGIISIGDVVKSRIREIETEAEQIK 139
Query: 201 EFIRG 205
+I G
Sbjct: 140 AYIAG 144
>gi|120611659|ref|YP_971337.1| XRE family transcriptional regulator [Acidovorax citrulli AAC00-1]
gi|326317108|ref|YP_004234780.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|120590123|gb|ABM33563.1| putative transcriptional regulator, XRE family [Acidovorax citrulli
AAC00-1]
gi|323373944|gb|ADX46213.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 150
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + +D+ + AV+ MA +IGSLVV+ G+ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLFTVTADEPLAKAVEVMADKDIGSLVVMDHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ +V G + V M D TL ++ + + M L ++H R++PV+D + +
Sbjct: 54 EVIQAVVKNGGTVGTMLVRTAMDDAPLTCTLETEMDEVRRMML--NRHARYMPVMDKKML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AVV+ Q E + L +IR
Sbjct: 112 MGVVSFYDVAKAVVDSQNFENQMLKAYIR 140
>gi|259418480|ref|ZP_05742398.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345875|gb|EEW57719.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 174
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 56 NISVAEVLMTKGD---DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGI 112
N+S A T GD +K G DTV AV+ + IG+L+V P Q + GI
Sbjct: 27 NMSAARA--TVGDVLANKSGDLFWINPQDTVAKAVEVLRDKGIGALLVKNP--QGELVGI 82
Query: 113 FTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID 172
+ERD +R++ V +M+ + +IT D +++ ++LMTD RH+PV++
Sbjct: 83 LSERDIVRRLADTPGETLPQTVEGLMSTD--VITATPDQSVVEVLRLMTDGRFRHMPVLE 140
Query: 173 G-RIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
++VGMI+I DVV + + E +L + I G
Sbjct: 141 QEQLVGMITIGDVVNFRLTALEYEALQLKQLIVG 174
>gi|160932207|ref|ZP_02079598.1| hypothetical protein CLOLEP_01042 [Clostridium leptum DSM 753]
gi|156868809|gb|EDO62181.1| CBS domain protein [Clostridium leptum DSM 753]
Length = 149
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
DT+E+A + M +H++G L V+ GE + G+ T+RD + + V G+ P + +IMT
Sbjct: 20 DTLEEAARLMKEHDVGVLPVVSGGE---LKGLVTDRDIVLQCVAAGKEPSQVKAYQIMTK 76
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
+ ++++ + A +LM + IR +PVI DG I GMIS+ D+ R
Sbjct: 77 D--VVSVSPGHTVSEAARLMGKEQIRRLPVIKDGVIDGMISMADIAR 121
>gi|403738791|ref|ZP_10951392.1| hypothetical protein AUCHE_08_04070 [Austwickia chelonae NBRC
105200]
gi|403191441|dbj|GAB78162.1| hypothetical protein AUCHE_08_04070 [Austwickia chelonae NBRC
105200]
Length = 142
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK--YTRVA 135
R D +V + +A+H IG++VV G IAGI +ERD +R + R P+ + V
Sbjct: 19 REDASVTSLIALLAEHRIGAVVVSNDGTT--IAGIVSERDIVRCL---ARDPECLHASVR 73
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKG 194
+IMT E T P + + MT + IRHVPV+ D ++VG++SI DVV+ + Q +
Sbjct: 74 DIMTVEVH--TCPPQMPVAELSREMTTRRIRHVPVVRDDQMVGLVSIGDVVKERIGQLQD 131
Query: 195 ELKRLNEFIR 204
E L E+I+
Sbjct: 132 EADHLAEYIQ 141
>gi|221134672|ref|ZP_03560975.1| Signaling protein with a cAMP-binding, CBS domains and predicted
nucleotidyltransferase domain [Glaciecola sp. HTCC2999]
Length = 610
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++++A + M+QH + SL+V E +H+ GI T+RD ++V QG + V+EIMT
Sbjct: 165 SIQEAAQMMSQHGVSSLIV---TEDEHLIGIVTDRDLRNRVVAQGMDIQLA-VSEIMTQR 220
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI---DGRIVGMISIVDVVR 186
I + N+ A+ LM++K+I H+PV+ D VGM++ DV+R
Sbjct: 221 PAYIL--HNQNMFAAIALMSEKNIHHLPVLHANDRTPVGMVTSSDVIR 266
>gi|153009268|ref|YP_001370483.1| hypothetical protein Oant_1938 [Ochrobactrum anthropi ATCC 49188]
gi|151561156|gb|ABS14654.1| CBS domain containing protein [Ochrobactrum anthropi ATCC 49188]
Length = 143
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG D V DT+ AV + +H IG+LVV E I GI +ER
Sbjct: 1 MTVRSILETKGRDVV----VIAPADTLSHAVAMLNKHKIGALVVC--DEAGRIKGILSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRI 175
D +R + Q V E+MT K+ I M++MT RH+PV + G++
Sbjct: 55 DVVRAVAAQETKAMSMPVTEVMT--AKVQVCREHHTINQVMEIMTRSRFRHMPVEEHGKL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG+ISI DVV+ +E + E + + +I
Sbjct: 113 VGIISIGDVVKRRIEDVEREAEDIRTYI 140
>gi|399070716|ref|ZP_10749835.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Caulobacter sp. AP07]
gi|398044046|gb|EJL36895.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Caulobacter sp. AP07]
Length = 143
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L KGD ++TVE A + +G++VVL+ + + IAGI +ERD
Sbjct: 3 VSQILKDKGD----LVFTASPNETVEAAAALLHTRKVGAMVVLE--DDETIAGILSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
+R I +G + ++ MT + L P + + ++ MTD+ +RH+PV G R+ G
Sbjct: 57 VRVIAKEGAAALTKPISTCMT-RDVLFAQPEE-TVDALLERMTDRRVRHLPVCKGKRLAG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI D+V+ + + + E L +I
Sbjct: 115 IISIGDLVKYKIRETQAEADGLKAYI 140
>gi|328951661|ref|YP_004368996.1| signal transduction protein with CBS domains [Marinithermus
hydrothermalis DSM 14884]
gi|328451985|gb|AEB12886.1| putative signal transduction protein with CBS domains
[Marinithermus hydrothermalis DSM 14884]
Length = 135
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA + MA N+GS+VV+ E G+ T+RD ++V +G P+ T V +MT +
Sbjct: 19 SVADAARLMADINVGSVVVV---EGLRPVGVLTDRDITVRVVAEGLDPEATPVRRVMTPD 75
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
+TL + ++ A++ + DK IR PV+D GR+VG+ ++ DV+
Sbjct: 76 P--VTLGEELSLFEALEEVKDKAIRRFPVVDPEGRLVGIFTLDDVL 119
>gi|374998260|ref|YP_004973759.1| hypothetical protein AZOLI_p10295 [Azospirillum lipoferum 4B]
gi|357425685|emb|CBS88581.1| conserved protein of unknown function, cystathionine beta synthase
domain [Azospirillum lipoferum 4B]
Length = 151
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVV--LKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
+ R+ TV +A+ M NI +LVV + E +AG+ +ERD + ++ +G
Sbjct: 15 VAVRTSATVAEAIGLMKAENISALVVKDVCRTEGNTLAGVLSERDIVHALLDRGAPLLSM 74
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQ 191
V+++MT + + PSD ++ A+QLM HIRH+PV+ DG +VG++S D R +++
Sbjct: 75 PVSQLMTRQ-PVTCAPSD-SVRQALQLMDRHHIRHLPVLEDGHLVGVVSARDFTRLQLQE 132
Query: 192 QKGELKRLNEFIRGEYY 208
+G + E G Y
Sbjct: 133 LEGTVAAAPEPSAGTAY 149
>gi|418352|sp|P32987.1|YBP3_ACIAM RecName: Full=Uncharacterized 17.7 kDa protein in bps2 3'region;
AltName: Full=ORF3
gi|40783|emb|CAA45529.1| unnamed protein product [Acidianus ambivalens]
Length = 164
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG-RSPKYTRVAEIMTD 140
T+ +A K M +HN+GSLVV+ Q + GI TERD ++ + SP V + MT
Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERDIVKAASNRDIDSP----VEKYMTK 74
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ K +T D + A+ +M + RH+P+I +G++ G++SI D+ RA+++ + +
Sbjct: 75 DVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGK 132
Query: 199 LNEFIRG 205
E ++G
Sbjct: 133 PAEEVKG 139
>gi|170741416|ref|YP_001770071.1| signal-transduction protein [Methylobacterium sp. 4-46]
gi|168195690|gb|ACA17637.1| putative signal-transduction protein with CBS domains
[Methylobacterium sp. 4-46]
Length = 143
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++VA +L KG + + + T+ +A +A+ IG+LVV G + GI +ER
Sbjct: 1 MTVARILSQKGR----TVVTVQPHRTLSEAATLLAEKGIGALVVSDAGLS--VLGIISER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R + G ++ MT +++T I M+LMTD RHVPV+ + R+
Sbjct: 55 DIIRAVARHGAEALDHSISRHMT--GRVVTCTRGTAIEEVMELMTDGRFRHVPVVEEDRL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
VG++SI DVV+ + + E + L E+I
Sbjct: 113 VGLVSIGDVVKHRIALVEAEQQALREYI 140
>gi|229491447|ref|ZP_04385271.1| CBS domain protein [Rhodococcus erythropolis SK121]
gi|229321732|gb|EEN87529.1| CBS domain protein [Rhodococcus erythropolis SK121]
Length = 142
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 87/146 (59%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A++L KG+ S + + TV + ++A+HNIG++VV+ + GI +ERD
Sbjct: 3 IADILRNKGN----SIVTIDAHTTVNGLLCDLARHNIGAMVVVD---DDAVVGIISERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ +G +V E+MT +P+DA + +MT++ IRH+PVI DG ++G
Sbjct: 56 VRRLHERGPDLLGIQVCEVMT-ALMYTCVPADA-VDSIAAIMTERRIRHLPVIEDGNLLG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV++ +++ K E +L +I
Sbjct: 114 IVSIGDVVKSRIDELKSERDQLESYI 139
>gi|397685507|ref|YP_006522826.1| nucleotidyltransferase [Pseudomonas stutzeri DSM 10701]
gi|395807063|gb|AFN76468.1| nucleotidyltransferase [Pseudomonas stutzeri DSM 10701]
Length = 644
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+CC D + AV M N+GS+V++ Q H GIFT RD LR++VG+G + +
Sbjct: 188 VCCAPDMPLNQAVSLMHSRNVGSVVIVD--GQMHAQGIFTLRD-LRRLVGEGIADLSLPI 244
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
A++MT LP DA A MT++ I H+ VI+ GR+ G++S D+
Sbjct: 245 AQVMTPSP--FGLPPDATAFDAAIAMTERRIAHICVINKGRLCGVLSERDL 293
>gi|16081707|ref|NP_394084.1| inosine-5'-monophosphate dehydrogenase [Thermoplasma acidophilum
DSM 1728]
gi|10639778|emb|CAC11750.1| inosine-5'-monophosphate dehydrogenase related protein
[Thermoplasma acidophilum]
Length = 145
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D + +A K MAQ ++G ++ + GE I G+ TE DY+ KI+ Q R PK R+ EIM
Sbjct: 24 DTSAYEAAKIMAQDHVGFAIIAENGE---IKGMVTEWDYINKIIAQDRDPKKVRIDEIMN 80
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
+ +I++ D ++M IR +PV+ +G+++G+I+ D++R
Sbjct: 81 --SPIISIDPDTPTFKVTEIMAKNGIRRLPVMKNGKLLGVITSRDILR 126
>gi|341581159|ref|YP_004761651.1| hypothetical protein GQS_00355 [Thermococcus sp. 4557]
gi|340808817|gb|AEK71974.1| hypothetical protein GQS_00355 [Thermococcus sp. 4557]
Length = 177
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ DDTV K ++++ +GS VV+K E I GI T+RD L K+V +GR PK +V E+
Sbjct: 19 KPDDTVHRIAKILSKNKVGSAVVVKGDE---IVGIITDRDILDKVVAKGRDPKTVKVEEV 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMIS 180
MT IT+ D + A+ M DK IR + V GR +G ++
Sbjct: 76 MTKNP--ITIEDDYEVQDAIDKMMDKGIRRLLVTRLGRPIGFVT 117
>gi|212224081|ref|YP_002307317.1| hypothetical protein TON_0932 [Thermococcus onnurineus NA1]
gi|212009038|gb|ACJ16420.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 181
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ DDTV + ++++ +GS VV+K E I GI T+RD L K+V +GR PK +V E+
Sbjct: 19 KPDDTVHRIARILSRNKVGSAVVVKDDE---IVGIITDRDILDKVVAKGRDPKDVKVEEV 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
MT +T+ D + A+ M DK IR + V G+ +G ++ D++ A+
Sbjct: 76 MT--KNPVTIEDDYEVQDAIDRMMDKGIRRLLVTRLGKPIGFVTAADLLAAL 125
>gi|387127198|ref|YP_006295803.1| inosine-5'-monophosphate dehydrogenase [Methylophaga sp. JAM1]
gi|386274260|gb|AFI84158.1| Inosine-5'-monophosphate dehydrogenase [Methylophaga sp. JAM1]
Length = 149
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+++ AV+ M +H IGSLVV G + GI +ERD L + + + A+ MT
Sbjct: 21 DSLDKAVRLMMEHRIGSLVVTDNGA---LVGILSERDLLNVLHQKHAMWEPKTAADAMTP 77
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRL 199
T D + M +M + +IRH+PV+ GR+ GM+SI D+V ++++ K E K L
Sbjct: 78 NP--YTCDPDNTLEEVMNMMVEHNIRHLPVVYKGRLEGMLSITDIVEELLKKAKFENKLL 135
Query: 200 NEFIRG 205
+I+
Sbjct: 136 KNYIQN 141
>gi|220702516|pdb|3FHM|A Chain A, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702517|pdb|3FHM|B Chain B, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702518|pdb|3FHM|C Chain C, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
gi|220702519|pdb|3FHM|D Chain D, Crystal Structure Of The Cbs-Domain Containing Protein
Atu1752 From Agrobacterium Tumefaciens
Length = 165
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L KG D V D ++ +A + H IG++VV + GIFTERD
Sbjct: 26 VKDLLDRKGRDVV----TVGPDVSIGEAAGTLHAHKIGAVVVTDA--DGVVLGIFTERDL 79
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVG 177
++ + GQG + V+ MT ++ ++ M++MT RHVPV +GR+ G
Sbjct: 80 VKAVAGQGAASLQQSVSVAMT--KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAG 137
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ISI DVV+A + + + E + + +I G
Sbjct: 138 IISIGDVVKARIGEIEAEAEHIKAYIAG 165
>gi|427416005|ref|ZP_18906188.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Leptolyngbya sp. PCC 7375]
gi|425758718|gb|EKU99570.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Leptolyngbya sp. PCC 7375]
Length = 177
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ RS TVE+A+ M + SL+V + E Q GI TERD + K++ +G SP +TRV
Sbjct: 13 IVIRSSATVENAIWLMRTKRVRSLIV-EEAEGQGPYGIVTERDIIYKVIAKGSSPHFTRV 71
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
+ I I +P +A + A Q+ + + PVI D +++G+IS+ D++
Sbjct: 72 SNIT--RRPCIRMPMNATLQEAAQIFSATGVHRAPVIEDDQLLGIISLTDIL 121
>gi|163782940|ref|ZP_02177935.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881620|gb|EDP75129.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
Length = 624
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 19 ILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVAEVLMTKGDD-KVGSWLCC 77
++E ++ + R + + +P ++ G S+ L + D KV +
Sbjct: 112 LIEKYEEFELFFARSLAKKLSATVKMVKTPLKDVG----SLERFLTLRVKDIKVKAVPLL 167
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R +D+V +A + M + N + V G Q GI TERD ++++V +GR P TR++EI
Sbjct: 168 RGEDSVLEAARLMREKNFSCVFV---GNGQ--TGIVTERDIIKRVVAEGRDPSSTRLSEI 222
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
M+ ++ + D+ + A+ M +K+IR + V DGR++G+I D++
Sbjct: 223 MS--YPVVAVEEDSFLFEAIIEMANKNIRRLGVSRDGRLIGVIEDKDII 269
>gi|170740037|ref|YP_001768692.1| signal-transduction protein [Methylobacterium sp. 4-46]
gi|168194311|gb|ACA16258.1| putative signal-transduction protein with CBS domains
[Methylobacterium sp. 4-46]
Length = 131
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 65 TKGDDKVGSWL-CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123
T GD G L T+ M N+G+L VL G + GI +ERD R+++
Sbjct: 5 TVGDVIAGHPLHAVTGSFTIASVCHRMRALNVGALAVLDEGR---LIGIISERDIARRVI 61
Query: 124 GQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIV 182
R P T V E+MT E +T+ + A + A +LM ++ IRH+PV+ D +VGMIS+
Sbjct: 62 AGHRDPMLTLVREVMTREP--LTIAAQAPLAEAHRLMAERGIRHLPVMRDEAVVGMISLR 119
Query: 183 DV 184
D+
Sbjct: 120 DI 121
>gi|442806120|ref|YP_007374269.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741970|gb|AGC69659.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 149
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
S + D T+++ + M +HN+G++ V+ +Q + GI T+RD + + + G+ P T
Sbjct: 10 SVVTVSPDTTIKEVAELMQKHNVGAIPVV---DQSGLKGIVTDRDLVVRNIASGKDPFST 66
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDV 184
V EIMT +++ T+ D ++ ++M K +R VPV++ +++GM+S+ D+
Sbjct: 67 PVREIMT--SQVATVSPDDDVQSVTKIMASKQVRRVPVVENQQLIGMLSLGDI 117
>gi|347523925|ref|YP_004781495.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460807|gb|AEM39243.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 143
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D ++E+A + M ++ IGS++V+ E+ + GI TERD L +V +G+ + V
Sbjct: 21 VTVHRDVSIEEAARKMYENRIGSVLVVD--EEGKLVGIVTERDILYAVV-KGKVGRGLPV 77
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
+IMTD IT D ++ A++ M + ++RH+PV+D G+ VGM+S+ DVV
Sbjct: 78 WDIMTDNP--ITAKPDEPLIEAIERMREANVRHLPVVDEEGKPVGMLSLRDVV 128
>gi|84498468|ref|ZP_00997238.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
gi|84381211|gb|EAP97095.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
Length = 142
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 11/148 (7%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++V+ KGD + + RSD +V D + +A+H IG++VV G Q + GI +ERD
Sbjct: 3 ISDVVKRKGD----TVITVRSDASVTDLLDLLAEHRIGAVVVSDDG--QSVDGIVSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQ-LMTDKHIRHVP-VIDGRIV 176
+R + G V+ IMT E P D L A++ MT+ IRHVP V+DG++
Sbjct: 57 VRHLQKLGADVLGKPVSSIMTSEVATCA-PEDE--LGALEHTMTELRIRHVPVVVDGQLK 113
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFIR 204
++SI DVV+ + + E +L+ +I+
Sbjct: 114 AIVSIGDVVKHRITDLQAERDQLSAYIQ 141
>gi|324998234|ref|ZP_08119346.1| hypothetical protein PseP1_05678 [Pseudonocardia sp. P1]
Length = 147
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGD--DKVGSWLCCRSDDTVEDAVKNMA-QHNIGSLVVLKPGEQQHIAGIF 113
+ V+++L KGD V SW +TV +A +A IG+LVV G ++ + GI
Sbjct: 1 MKVSDILRIKGDAVQTVLSW------NTVGEAATRLAGPPAIGALVVSDDGFRERVDGIV 54
Query: 114 TERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-D 172
+ERD +R++ G + VA++MT +IT D I M M RH+PV+ D
Sbjct: 55 SERDIVRRLASDGGAVSRLTVADVMT--RHVITCRPDDPIAEVMAQMNRWRHRHLPVVED 112
Query: 173 GRIVGMISIVDVVRAVVEQQKGELKRLNEF 202
G++ GMISI DVV+ + + E L +
Sbjct: 113 GKLCGMISIGDVVKQRLAEMSTEAGVLRDI 142
>gi|209966508|ref|YP_002299423.1| hypothetical protein RC1_3249 [Rhodospirillum centenum SW]
gi|209959974|gb|ACJ00611.1| CBS domain protein [Rhodospirillum centenum SW]
Length = 138
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D +V+ A + MA+ ++G+L V GE + GI T+RD L ++V QGR P T VA +M+
Sbjct: 17 DASVQQAARLMAELDVGALPV---GEAADLRGILTDRDVLIRVVAQGRDPATTPVAAVMS 73
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMI 179
+ ++T + + + M + +R VPV+ +GR+VGM+
Sbjct: 74 --SDVLTCTGEEPVEAVLLRMESRQVRRVPVLEEGRVVGML 112
>gi|156937882|ref|YP_001435678.1| signal-transduction protein [Ignicoccus hospitalis KIN4/I]
gi|156566866|gb|ABU82271.1| putative signal-transduction protein with CBS domains [Ignicoccus
hospitalis KIN4/I]
Length = 143
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
++T+ +A K M +GSLVV+ E+ + GI TERD +R V +G+ V+E+MT
Sbjct: 20 NNTLREAAKEMMDKGVGSLVVVD--EKGDVVGIITERDVVRA-VAEGKD-LNAPVSEVMT 75
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ ++T+ + ++L A++ M ++RH+PV D IVGM+S+ D+ AV + LKR
Sbjct: 76 PD--VLTVSPETSVLKAIETMKMHNVRHLPVASDDEIVGMVSLKDLAFAVAAEMI--LKR 131
Query: 199 LNEFIRGEY 207
+ E ++ E
Sbjct: 132 IYEMLKEEL 140
>gi|429768375|ref|ZP_19300535.1| CBS domain protein [Brevundimonas diminuta 470-4]
gi|429189202|gb|EKY30045.1| CBS domain protein [Brevundimonas diminuta 470-4]
Length = 142
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
VAE+L KG G+ D + +A + + +G+L+V E + G+ +ERD
Sbjct: 3 VAEILKGKG----GAVFTLAPDANLNEACAELERRQVGALIVC---EGDGVVGVLSERDI 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHA-MQLMTDKHIRHVPVI-DGRIV 176
+R I G V+ MT E + A + A M MTD+ IRH+PV+ D R+
Sbjct: 56 VRAISRDGTQALERPVSHYMTSE---VVFADPAETVEALMARMTDRRIRHLPVLLDKRLA 112
Query: 177 GMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI DVV+ + Q E + L +I
Sbjct: 113 GVVSIGDVVKCQIAQATQEAESLRTYI 139
>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 174
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%), Gaps = 15/152 (9%)
Query: 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117
+VA++L KGD + R +DTV AV+ + IG+LVV + + GI +ERD
Sbjct: 34 TVAKLLEAKGD----AIFAIRPNDTVGHAVEALRDKRIGALVVTD--QNGALQGILSERD 87
Query: 118 YLRKIVGQGRSPKYTR---VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DG 173
+R++ +P +T V +IMT E K T D ++ ++M + RH+PV+ D
Sbjct: 88 IVRRL---AETPGHTLPQLVEDIMTREVK--TCKPDDLLIDVAKVMNEGRFRHLPVVKDD 142
Query: 174 RIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
R+ GMI++ DVV +++ + E R+ + I G
Sbjct: 143 RLCGMITVGDVVNFRLQELEYEALRMKQMIVG 174
>gi|159899786|ref|YP_001546033.1| hypothetical protein Haur_3268 [Herpetosiphon aurantiacus DSM 785]
gi|159892825|gb|ABX05905.1| CBS domain containing protein [Herpetosiphon aurantiacus DSM 785]
Length = 142
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 86 AVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLI 145
AV +++HNIG+LVV+ E I GI +ERD +R Q + +V +MT N +
Sbjct: 26 AVAILSEHNIGTLVVM---EDDRIVGIISERDIIRA-AAQDPAIFERQVQHVMT-ANVIT 80
Query: 146 TLPSDANILHAMQLMTDKHIRHVPVIDGRI-VGMISIVDVVRAVVEQQKGELKRL 199
PSD ++ +Q MT++ RH+P++DG I +G++SI DVV+A + + +G+L L
Sbjct: 81 GRPSD-DLKAVLQTMTNRRFRHLPILDGDILLGIVSIGDVVKAQLGEYEGKLDTL 134
>gi|85709821|ref|ZP_01040886.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
gi|85688531|gb|EAQ28535.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
Length = 143
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 67 GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG 126
GD + C V +AV +A IG+L V++ G+ IAGI +ERD + ++ G
Sbjct: 8 GDRDATDIISCEVTTPVAEAVSLLAGKRIGALPVMRDGK---IAGIISERDVVYRLAESG 64
Query: 127 RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVV 185
V +IMT + +T+ I A+ LMT + RH PV+D ++V ISI D+V
Sbjct: 65 HDALDMTVGDIMT--SPAVTVEPTTLIDDALALMTKRRFRHFPVVDNDKLVAFISIGDLV 122
Query: 186 RAVVEQQKGELKRLNEFIR 204
+ +++ + E L ++I+
Sbjct: 123 KHKIDEVEHEAAALRDYIQ 141
>gi|407464562|ref|YP_006775444.1| signal-transduction protein [Candidatus Nitrosopumilus sp. AR2]
gi|407047750|gb|AFS82502.1| signal-transduction protein [Candidatus Nitrosopumilus sp. AR2]
Length = 145
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++++A ++M + +G ++V E GI TERD++ KI +GR P +T + E+++
Sbjct: 22 SLQEAAEHMKKLGVGCVIV---TENDKPIGIITERDFVTKIAAEGR-PLFTEIKEVIS-- 75
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKRL 199
+ LIT+ SD I A +LM +K I +PV + IVG+I+ D+VR E++R+
Sbjct: 76 SPLITIDSDETIWEASELMKEKLIHKLPVKENDEIVGIITTSDIVRISSVGSDSEMRRI 134
>gi|325293135|ref|YP_004278999.1| inosine-5`-monophosphate dehydrogenase [Agrobacterium sp. H13-3]
gi|418408398|ref|ZP_12981714.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
gi|325060988|gb|ADY64679.1| putative inosine-5`-monophosphate dehydrogenase protein
[Agrobacterium sp. H13-3]
gi|358005312|gb|EHJ97638.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium
tumefaciens 5A]
Length = 144
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ +A + H IG+LVV + GIFTERD ++ + G+G + V+ MT
Sbjct: 24 SIGEAAATLNAHKIGALVVTDA--DGVVLGIFTERDLVKVVAGEGAASLLQSVSVAMT-- 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+I ++ M++MT RH+PV DGR+ G+ISI DVV+A + + + E + +
Sbjct: 80 KNVIRCHHNSTTDELMEIMTGGRFRHIPVEDDGRLAGIISIGDVVKARIGEIEAEAEHIK 139
Query: 201 EFIRG 205
+I G
Sbjct: 140 AYIAG 144
>gi|325969246|ref|YP_004245438.1| signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
gi|323708449|gb|ADY01936.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
moutnovskia 768-28]
Length = 157
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ R D+ + ++ M + NIGS+++ E+ + G+FTERD LR +V V
Sbjct: 15 VTVRDDEPLISVIRIMNERNIGSIII--TDEEGRVIGVFTERDLLR-LVASNIDISTLTV 71
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVD----VVRAV 188
++MT + +I + DA+++ A+ +M IRH+P++ DG+IVG+ISI D + R +
Sbjct: 72 GDVMTKD--VIVIEQDASLIKAVHIMAKHGIRHLPIVDEDGKIVGIISIRDTAIILARLL 129
Query: 189 VEQQKGEL 196
V+ G L
Sbjct: 130 VDMGMGRL 137
>gi|121999068|ref|YP_001003855.1| isocitrate dehydrogenase [Halorhodospira halophila SL1]
gi|121590473|gb|ABM63053.1| isocitrate dehydrogenase, NADP-dependent [Halorhodospira halophila
SL1]
Length = 589
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFT 114
E ++ V T D + + D +VEDA+ M + I S+VV ++ GI T
Sbjct: 449 EMVASGRVPHTVADLMNPNLVTMSGDTSVEDAMHLMRERRISSVVVQPAPDEAEGMGIMT 508
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-- 172
+RD + ++V + P R++E T LIT+P D ++L + M ++IR + VID
Sbjct: 509 QRDVISRVVSATKQPSQVRISEAAT--RPLITVPEDTSLLDCAERMGAENIRRMVVIDTQ 566
Query: 173 GRIVGMISIVDVVRAVVEQ 191
GR +G+IS D+ A VEQ
Sbjct: 567 GRPIGIISDTDIF-ASVEQ 584
>gi|350630805|gb|EHA19177.1| hypothetical protein ASPNIDRAFT_54229 [Aspergillus niger ATCC 1015]
Length = 672
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV+DA M +H+ +L+V +Q I GIFT +D + +++ G P V +MT
Sbjct: 287 TVKDAAALMREHHTTALLV---QDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPH 343
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKG 194
PSD +I A++ M D H ++PV++ G IVGM+ ++ + A +EQ +
Sbjct: 344 PDFA--PSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQDRA 396
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 100 VLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQL 159
VL + IAGIFT +D ++VG G + V+EIMT +N L +D + A+ L
Sbjct: 133 VLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIMT-KNPLCA-RTDTSATDALDL 190
Query: 160 MTDKHIRHVPVID 172
M K RH+PV+D
Sbjct: 191 MVRKGFRHLPVMD 203
>gi|188996634|ref|YP_001930885.1| signal-transduction protein with CBS domains [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931701|gb|ACD66331.1| putative signal-transduction protein with CBS domains
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 140
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
++ D ++++ MA N+GS+VV++ G+ GI T+RD + ++V +G +P +
Sbjct: 11 FISISQDASIKEVAGIMASRNVGSVVVVEDGKP---VGILTDRDIVVRLVNKGINPSEVK 67
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVV 185
V+E+MT + I L D I A++++ + +R PV+ DG++ G++S+ D+V
Sbjct: 68 VSELMTKDP--ICLQEDLGIFEALEIVKQEGVRRYPVVDKDGKMTGIVSLDDIV 119
>gi|390961930|ref|YP_006425764.1| hypothetical protein CL1_1774 [Thermococcus sp. CL1]
gi|390520238|gb|AFL95970.1| hypothetical protein CL1_1774 [Thermococcus sp. CL1]
Length = 177
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
+ DDTV + ++++ +GS VV+K E I GI T+RD L K+V +GR PK +V E+
Sbjct: 19 KPDDTVHRVARILSKNKVGSAVVVKDDE---IVGIITDRDILDKVVAKGRDPKTVKVEEV 75
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMIS 180
MT IT+ D + A+ M DK IR + V GR +G ++
Sbjct: 76 MT--KNPITIEDDYEVQDAIDKMMDKGIRRLLVTRLGRPIGFVT 117
>gi|448302950|ref|ZP_21492900.1| signal transduction protein with CBS domains [Natronorubrum
sulfidifaciens JCM 14089]
gi|445593957|gb|ELY48124.1| signal transduction protein with CBS domains [Natronorubrum
sulfidifaciens JCM 14089]
Length = 147
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Query: 72 GSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131
GS + D ++ D V+ M +GS++V E G+ T+RD +++ + +
Sbjct: 9 GSVVTVDPDASLSDVVRTMRTERVGSVIVASAAEPL---GLVTDRDLAFEVLDENDVTQE 65
Query: 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVV 185
T VAEI+ D+ L T+P+DA + ++LM+ +R +PV+ DG +VG++S+ DVV
Sbjct: 66 TPVAEIVDDD--LRTVPADAGVYELVELMSTNGVRRLPVVDDGDLVGIVSLSDVV 118
>gi|452962639|gb|EME67756.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 141
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
+ L + TV +A + M +G+++V + GIFTERD L +V +G +P T
Sbjct: 10 TVLAMPATTTVREAARQMKARGVGAVMVTD--HHGKLRGIFTERDCLFDVVAEGINPDTT 67
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVV 185
++ +MT + + IT +D + A+ +M D RH+PV+D G VGM+SI D +
Sbjct: 68 TLSMVMTPDPETIT--ADRKLGQALHMMHDNGFRHIPVVDHGIPVGMVSIRDAL 119
>gi|354559092|ref|ZP_08978344.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
gi|353544262|gb|EHC13717.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ ++E+ + +A NIGS+ V + + + G+ T+RD L + + QG+ PK T+ EIMT
Sbjct: 17 NQSLEEVAQILASSNIGSVPVC---QDKQLMGMITDRDILVRAIAQGKDPKTTKATEIMT 73
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV-VRAVVEQQKGE-L 196
E + ++ +D I A LM + IR +PV+D ++VG ++I D+ V+++ + GE L
Sbjct: 74 KEVQSVSPETD--IHQASDLMAESQIRRLPVVDNNQLVGFLAIGDIAVQSIHVNEAGEAL 131
Query: 197 KRLNEFIR 204
++E I+
Sbjct: 132 SSISEGIQ 139
>gi|312112205|ref|YP_003990521.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236622|ref|YP_004589238.1| hypothetical protein Geoth_3289 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721087|ref|ZP_17695269.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217306|gb|ADP75910.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363477|gb|AEH49157.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366440|gb|EID43731.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 148
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
+ TV++A + M+Q NIG+L V + G+ + G+ T+RD + QG+ P T V+
Sbjct: 19 TVSPNQTVQEAAQIMSQKNIGALPVAENGQ---VKGMITDRDITLRTSAQGKDPASTPVS 75
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKG 194
E+MT N+++T D ++ A +M +R +P++ + ++ G++++ D+ Q
Sbjct: 76 EVMT--NRVVTGTPDMSVQEAANVMAQNQVRRLPIVENNQLQGIVALGDIATNSASDQAA 133
Query: 195 E 195
E
Sbjct: 134 E 134
>gi|91787716|ref|YP_548668.1| hypothetical protein Bpro_1837 [Polaromonas sp. JS666]
gi|91696941|gb|ABE43770.1| CBS domain [Polaromonas sp. JS666]
Length = 155
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V ++L KG+ + + D+ + A + MA +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVLDILRVKGN----TLYTVQPDEPLAKATQIMADKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + IV G T V M D +T S+ + ++M D+H R++PV++ + +
Sbjct: 54 EVIVCIVKNGGEIGNTLVRTAMDDHP--LTCTSETELDEVRRMMLDRHARYMPVMNQKML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVDSQNFENKMLKAYIR 140
>gi|336118180|ref|YP_004572949.1| hypothetical protein MLP_25320 [Microlunatus phosphovorus NM-1]
gi|334685961|dbj|BAK35546.1| hypothetical protein MLP_25320 [Microlunatus phosphovorus NM-1]
Length = 142
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
E+L TKG + + D +V D V + +HN+G++VV G + GI +ERD +R
Sbjct: 5 EILQTKG----SAVITITPDASVRDLVVLLKEHNLGAVVVSTDGAA--LDGIVSERDIVR 58
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGM 178
+ + V+++MT + L L M MTD IRH+PV+D G + G+
Sbjct: 59 ALAVDA-AVLSASVSDVMTAGVRTCQLNDSVESL--MSTMTDHRIRHLPVVDDDGNLSGI 115
Query: 179 ISIVDVVRAVVEQQKGELKRLNEFIRG 205
ISI DVV++ + Q + E +L ++ G
Sbjct: 116 ISIGDVVKSTITQLEFERDQLQGYVSG 142
>gi|429729721|ref|ZP_19264378.1| CBS domain protein [Corynebacterium durum F0235]
gi|429149115|gb|EKX92105.1| CBS domain protein [Corynebacterium durum F0235]
Length = 618
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 54 LENISVAEVLMTK-GDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGI 112
L S ++VL T+ GD K+ + D T++DA + M N+ SL+V + G + GI
Sbjct: 140 LRQESSSDVLRTQLGDFKIPNPATVTPDTTIQDAARIMEDRNVSSLLVSQDG---GLEGI 196
Query: 113 FTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID 172
T+RD ++V V EIMT + +T SD+ AM +M D I H+PV+D
Sbjct: 197 VTDRDMRGRVVANNMDVTLP-VTEIMTPNPRAVT--SDSLAFEAMLIMADMRIHHLPVVD 253
Query: 173 -GRIVGMISIVDVVR 186
G + G+I+ D++R
Sbjct: 254 EGAVTGIIASADIMR 268
>gi|15889056|ref|NP_354737.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|15156853|gb|AAK87522.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 144
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L KG D V D ++ +A + H IG++VV + GIFTERD
Sbjct: 5 VKDLLDRKGRDVV----TVGPDVSIGEAAGTLHAHKIGAVVVTDA--DGVVLGIFTERDL 58
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVG 177
++ + GQG + V+ MT ++ ++ M++MT RHVPV +GR+ G
Sbjct: 59 VKAVAGQGAASLQQSVSVAMT--KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAG 116
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ISI DVV+A + + + E + + +I G
Sbjct: 117 IISIGDVVKARIGEIEAEAEHIKAYIAG 144
>gi|121594028|ref|YP_985924.1| XRE family transcriptional regulator [Acidovorax sp. JS42]
gi|222111239|ref|YP_002553503.1| cbs domain-containing protein [Acidovorax ebreus TPSY]
gi|120606108|gb|ABM41848.1| putative transcriptional regulator, XRE family [Acidovorax sp.
JS42]
gi|221730683|gb|ACM33503.1| CBS domain containing protein [Acidovorax ebreus TPSY]
Length = 151
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + D+ + AV MA +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVSDILRLKGN----TLYTVHPDEPLARAVDAMADKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++ + G V M D TL +D + ++M +H R++PV+D R +
Sbjct: 54 EVIQALTKNGGGVGTMLVRTAMDDAPLTCTLETDMD--EVRRMMLGRHARYMPVMDKRML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AVV+ Q E K L +IR
Sbjct: 112 MGVVSFYDVAKAVVDSQNFENKLLKAYIR 140
>gi|149201936|ref|ZP_01878910.1| CBS domain protein [Roseovarius sp. TM1035]
gi|149144984|gb|EDM33013.1| CBS domain protein [Roseovarius sp. TM1035]
Length = 144
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L +KGD V + V +A + +A+ IG LVV + GE + GI +ERD
Sbjct: 3 VQQILKSKGDSAV---ITISPQTKVSEAAQTLAERRIGGLVVSRDGET--VEGIISERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVG 177
+R + +G V+E+MT + ++ + A MTD RH+PV++ G++VG
Sbjct: 58 VRSLAVRGVVCMTETVSEMMTRNPVCCSRQDTSDAVLAR--MTDGRFRHMPVVEAGKLVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+++I DVV+A +E+ E L I G
Sbjct: 116 IVTIGDVVKARLEELAMEKTALEGMIMG 143
>gi|298710996|emb|CBJ32303.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 118
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 90 MAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPS 149
M+ +N+G L+V K G ++GI +ERDY+ KI G++ K T V EI T K++
Sbjct: 1 MSAYNVGCLIVTKNG---VVSGIISERDYVCKIALLGKASKDTTVKEICTRGPKMVAAAR 57
Query: 150 DANILHAMQLMTDKHIRHVPVID---GRIVGMISIVDVVRAVVEQQKGELKRL 199
I ++ M +RH+PVID G + G+IS+ D+V+ +++ L ++
Sbjct: 58 SDTIEACVKKMIAADVRHLPVIDDDTGEVFGLISVKDLVKEYTKERDDLLMKM 110
>gi|71908619|ref|YP_286206.1| PAS [Dechloromonas aromatica RCB]
gi|71848240|gb|AAZ47736.1| PAS protein [Dechloromonas aromatica RCB]
Length = 1560
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 9/105 (8%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+EDA K MA +I SL+V+ GE GI TE + LR + R P+ TR+ IM+
Sbjct: 25 TLEDAAKLMAAEHISSLLVIADGE---ALGIVTESNILRAL--HARQPRETRLDVIMS-- 77
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPV--IDGRIVGMISIVDV 184
LIT PSD N++ A +L+ +++IRH+ V +G + G++S D
Sbjct: 78 QPLITAPSDLNLISARRLVEERNIRHLVVKNPNGTVAGIVSDTDF 122
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 111 GIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV 170
GI TERD R ++ + +P R+ E M+ + L ++ + ++ A++ M H+RH+ V
Sbjct: 179 GILTERDIPR-LLDKFLTPHDVRLGETMS--SPLRSVNVEMSVTGALEAMNRFHLRHMVV 235
Query: 171 ID--GRIVGMIS 180
+D G+I+G++S
Sbjct: 236 LDNNGKILGVVS 247
>gi|18978325|ref|NP_579682.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|397652399|ref|YP_006492980.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|18894155|gb|AAL82077.1| inosine-5'-monophosphate dehydrogenase related protein II
[Pyrococcus furiosus DSM 3638]
gi|393189990|gb|AFN04688.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 179
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
DTV+ K ++++ GS VV+ E I G+ TERD L K+V +G++PK +V EIMT
Sbjct: 22 DTVDRVAKILSRNKAGSAVVM---EGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK 78
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
+ + D +I ++LMT+K +R V V G+ +G ++ D++ A+
Sbjct: 79 NP--VKIEYDYDIEDVIELMTEKGVRRVLVTKFGKPIGFVTAADILAAL 125
>gi|90424619|ref|YP_532989.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
gi|90106633|gb|ABD88670.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB18]
Length = 142
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 12/150 (8%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L +KG VG + + A+K +A IG+++VL ++ I GI +ER
Sbjct: 1 MTVGAILQSKGRQIVG----VEPETPLFAAIKVLADRRIGAVLVLT---RKRIEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLI-TLPSDANILHAMQLMTDKHIRHVPVI-DGR 174
D +R + +G + V+ +MT K+I PSD + M+LMT RH+PVI D
Sbjct: 54 DVVRVLGERGAAVLEEPVSAVMT--RKVIHCRPSD-TVASMMELMTSGKFRHIPVIEDAE 110
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204
IVG+ISI D+V+ + + + E + L ++I+
Sbjct: 111 IVGLISIGDIVKWRLREYEHEQQALQDYIK 140
>gi|259418936|ref|ZP_05742853.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345158|gb|EEW57012.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 144
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
++ + R D T+E A + +++H IG++VV + GI +ERD +RK+ G
Sbjct: 11 EISEVVTIRPDATMEAAAQLLSEHGIGTVVV--SADNSTPLGILSERDIVRKLAKVGSVC 68
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
+V + MT + ++T D+ A+ MT+ RH+PV+ DG +VG+IS+ DVV+A
Sbjct: 69 LGHKVEDYMTRD--VVTCTQDSVAEEALATMTEGRFRHMPVVEDGALVGIISLGDVVKAQ 126
Query: 189 VEQQKGELKRLNEFIRG 205
+ + E L I G
Sbjct: 127 LNEVAMEKTALEGMIMG 143
>gi|240102779|ref|YP_002959088.1| hypothetical protein TGAM_0722 [Thermococcus gammatolerans EJ3]
gi|239910333|gb|ACS33224.1| Conserved hypothetical protein, containing 2 CBS-domains
[Thermococcus gammatolerans EJ3]
Length = 136
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
+ R DDTV+ A + M + +IGSLVV+ E + G T+ D +R++V G P T
Sbjct: 15 LIGIRPDDTVKRAGEIMTEFDIGSLVVVD--ENGDVVGFLTKGDIIRRLVVPG-LPNTTP 71
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGRIVGMISIVDVVRA 187
V EIMT L+T+P++ + + +M K ++H+ + +G+IVG+ SI D++ A
Sbjct: 72 VREIMT--KNLVTVPAETPLQDVLDVMAKKGLKHILIEENGKIVGIFSITDLLEA 124
>gi|420157289|ref|ZP_14664127.1| CBS domain protein [Clostridium sp. MSTE9]
gi|394756582|gb|EJF39662.1| CBS domain protein [Clostridium sp. MSTE9]
Length = 144
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 79/125 (63%), Gaps = 8/125 (6%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
DD++E A + M QHNIGS+ V +Q+ + GI T+RD + +G++ K +V +IM+
Sbjct: 19 DDSIERAAQLMKQHNIGSIPVC---DQEKVVGIVTDRDIATRSAAKGQNVKQQKVCDIMS 75
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDV-VRAVVEQQKGE-L 196
+N ++ P + ++ +LM++K IR VP+++ IVG++++ D+ V+ ++ GE L
Sbjct: 76 -QNPVVGNP-EMDVHEVAKLMSEKQIRRVPIVENNTIVGVVALGDISVQPNLQDNAGEAL 133
Query: 197 KRLNE 201
K +++
Sbjct: 134 KNISQ 138
>gi|14520462|ref|NP_125937.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
GE5]
gi|5457677|emb|CAB49168.1| Small intracellular module of unknown function,containing CBS
domains [Pyrococcus abyssi GE5]
gi|380740986|tpe|CCE69620.1| TPA: inosine-5'-monophosphate dehydrogenase related [Pyrococcus
abyssi GE5]
Length = 179
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D+V + ++++ +GS VV+ ++ + GI TERD L K+V +G+ PK +V EIMT
Sbjct: 22 DSVHRVARILSKNKVGSAVVM---DKDEVLGIVTERDILDKVVAKGKDPKEVKVEEIMT- 77
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQ 192
+ + D ++ A+ LMT+K +R + V G+ +G ++ D++ A+ Q
Sbjct: 78 -KNPVKIEYDYDVQDAIDLMTEKGVRRILVTKFGKPIGFVTAADLLSALASQN 129
>gi|399888963|ref|ZP_10774840.1| hypothetical protein CarbS_10612 [Clostridium arbusti SL206]
Length = 142
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
++DTVE A + M +HNIGS+ V + GE+ + G+ T+RD + V G + K V EIM
Sbjct: 16 ANDTVERAAQLMVEHNIGSIPVCR-GEK--VVGVITDRDITLRSVANGENAKVQTVKEIM 72
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDV 184
+ LI +AN A ++M+++ IR +PV+ + +VG+IS+ D+
Sbjct: 73 SSNPVLIQPDMEAN--DAARIMSERQIRRLPVVENSNLVGIISLGDI 117
>gi|295680850|ref|YP_003609424.1| hypothetical protein BC1002_6046 [Burkholderia sp. CCGE1002]
gi|295440745|gb|ADG19913.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
DDTV A++ MA ++ +++VL + ++ G+ ++RDY RK+ GR+ TRV +IMT
Sbjct: 25 DDTVLSALQLMADKDVTTVLVL---QSSNLVGVLSQRDYARKVDVLGRNAASTRVGDIMT 81
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKR 198
+ +T + + M K IRH+PVI+ GR++G++S DV+ ++++ + ++
Sbjct: 82 TQVFYVTPEHTCD--QCLASMHTKRIRHLPVIESGRVIGVLSNSDVLEELLQEDERFIRV 139
Query: 199 LNE 201
L +
Sbjct: 140 LED 142
>gi|374632184|ref|ZP_09704558.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Metallosphaera yellowstonensis MK1]
gi|373526014|gb|EHP70794.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Metallosphaera yellowstonensis MK1]
Length = 164
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137
R +D V A M HN+GS++V+ + + GI TERD +R +RV+E
Sbjct: 17 RDEDPVFLAAAEMRNHNMGSMLVVD--NKGKVVGIITERDVVR---AAAEKRVDSRVSEY 71
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQ 192
MT+E K +T D + A+ +M + RH+PV+ DG++ G+ISI D+ +A+ +
Sbjct: 72 MTEEVKGVT--EDTTVEEALAVMLENGFRHLPVVGKDGKVTGIISIRDLAKALTDSH 126
>gi|328543257|ref|YP_004303366.1| inosine-5'-monophosphate dehydrogenase [Polymorphum gilvum
SL003B-26A1]
gi|326413003|gb|ADZ70066.1| Inosine-5prime-monophosphate dehydrogenase protein [Polymorphum
gilvum SL003B-26A1]
Length = 143
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+SVA +L KG D V RS T+ + K +A+ IG++VV ++ HI GI +ER
Sbjct: 1 MSVASILNHKGRDVV----TARSSATLGEICKMLAEKGIGAIVVTD--DKGHIEGIVSER 54
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRI 175
D +R I G V + MT ++T + +I M M+ RH+PV+ +G++
Sbjct: 55 DIVRMIGRSGAGILDLPVGDGMT--RAVVTCREEDSINAVMARMSSGRFRHIPVVAEGKL 112
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
G+ISI DVV+ + Q + E +++ +I
Sbjct: 113 AGLISIGDVVKHRIAQVEQEAEQMRSYI 140
>gi|384565116|ref|ZP_10012220.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
gi|384520970|gb|EIE98165.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
Length = 138
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
+ L + +TV A + MA +G+L + GE + G+ T+RD + K++ +G+ P
Sbjct: 11 NPLYAETSETVTHAARTMADKGVGALPIR--GEDHKLKGMLTDRDIVVKVLAEGKDPVAV 68
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQ 191
V E+ DE ++ + D ++ A++LM+ +R +PV++ +VGM++ DV R + +
Sbjct: 69 HVGELPRDE--VVAVGPDDDVEEALRLMSRHQVRRLPVVEHEELVGMVAQADVARELPDA 126
Query: 192 QKGE 195
+ GE
Sbjct: 127 EVGE 130
>gi|70606254|ref|YP_255124.1| hypothetical protein Saci_0416 [Sulfolobus acidocaldarius DSM 639]
gi|449066457|ref|YP_007433539.1| CBS domain-containing protein [Sulfolobus acidocaldarius N8]
gi|449068732|ref|YP_007435813.1| CBS domain-containing protein [Sulfolobus acidocaldarius Ron12/I]
gi|68566902|gb|AAY79831.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
gi|449034965|gb|AGE70391.1| CBS domain-containing protein [Sulfolobus acidocaldarius N8]
gi|449037240|gb|AGE72665.1| CBS domain-containing protein [Sulfolobus acidocaldarius Ron12/I]
Length = 135
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
+ + K M + NIGS++V E GI TERD +R I G+G++ + T EIMT
Sbjct: 28 ISEIAKIMTEKNIGSVIV---TENNKPIGIITERDIVRAI-GKGKNLEST-AEEIMT--V 80
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAV 188
LIT+ D+ I A+ LM +IRH+PVI+ + +VG++SI DV RA+
Sbjct: 81 SLITIREDSPIAGALSLMRQFNIRHLPVINDKRELVGILSIRDVARAI 128
>gi|317037370|ref|XP_001399033.2| CBS/PB1 domain-containing protein [Aspergillus niger CBS 513.88]
Length = 662
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV+DA M +H+ +L+V +Q I GIFT +D + +++ G P V +MT
Sbjct: 287 TVKDAAALMREHHTTALLV---QDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPH 343
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQ 191
PSD +I A++ M D H ++PV++ G IVGM+ ++ + A +EQ
Sbjct: 344 PDFA--PSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQ 393
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 100 VLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQL 159
VL + IAGIFT +D ++VG G + V+EIMT +N L +D + A+ L
Sbjct: 133 VLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIMT-KNPLCA-RTDTSATDALDL 190
Query: 160 MTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQ 191
M K RH+PV+D I G++ I +E+
Sbjct: 191 MVRKGFRHLPVMDENQDISGVLDITKCFYDAMEK 224
>gi|379005253|ref|YP_005260925.1| putative signal transduction protein [Pyrobaculum oguniense TE7]
gi|375160706|gb|AFA40318.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pyrobaculum oguniense TE7]
Length = 128
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ--GRSPK 130
+ + C +D+ +E AV M N+GS+VV+ GI TERD +R + + ++P
Sbjct: 11 NLVYCYADEPIECAVAKMYASNVGSVVVVD--RTGSPVGIITERDIVRLLAEEVDFKTP- 67
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVV 189
RVA L+T D ++ M +K+IRH+PV++ GR++G++SI DV+RA+V
Sbjct: 68 LERVAR-----KNLVTASPDDTVIATAAKMIEKNIRHIPVVEGGRVIGVVSIRDVLRALV 122
Query: 190 EQQ 192
+
Sbjct: 123 TAE 125
>gi|427403130|ref|ZP_18894127.1| hypothetical protein HMPREF9710_03723 [Massilia timonae CCUG 45783]
gi|425718141|gb|EKU81093.1| hypothetical protein HMPREF9710_03723 [Massilia timonae CCUG 45783]
Length = 149
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIA-GIFTERDYLRKIVGQGRSPKYTR 133
+CC D+TV+ A M +H++G LVV+ ++ GI T+RD + ++ G P
Sbjct: 12 ICCTRDETVQGAAMLMRRHHVGDLVVIDTDGGGNVPLGILTDRDIVLAVIAPGLDPASLL 71
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQ 191
+IM+D+ L+T ++ ++ M + IR VPV+D G + G++S D++ + E+
Sbjct: 72 AGDIMSDD--LLTAGESDDVYETIEHMRLRGIRRVPVVDAQGNLSGIVSADDLLEFLAEE 129
Query: 192 QKGELKRLNEF 202
EL R+ +
Sbjct: 130 MS-ELSRIGSW 139
>gi|409395710|ref|ZP_11246771.1| nucleotidyltransferase [Pseudomonas sp. Chol1]
gi|409119647|gb|EKM96023.1| nucleotidyltransferase [Pseudomonas sp. Chol1]
Length = 644
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ C D + +AV M Q+N+GS+V++ EQQ GIFT RD LR+++G +
Sbjct: 188 VACLPDLPLREAVALMQQNNVGSIVIVD--EQQRPLGIFTLRD-LRRVIGAEAGELSAAI 244
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
+ MT E LP +A A MT++HI HV V+D G++VG+IS D+
Sbjct: 245 SCYMTHEP--FHLPPEATAFDAAIAMTERHIAHVCVVDNGQLVGVISERDL 293
>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [Rhodobacterales
bacterium HTCC2255]
gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
proteobacterium HTCC2255]
Length = 180
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L D V DAV M++ N GS+VV+ ++ + G+ TERD + K+VG+ +PK T +
Sbjct: 25 LTKSPDTNVFDAVNAMSKKNYGSVVVV--DTEKKVIGVVTERDIMNKVVGKELNPKETLL 82
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
+ IMT+ KL D +L +++M+++ R +PV+D G+I + + D V
Sbjct: 83 SSIMTENPKLARETDD--MLEWLRIMSNERFRRLPVVDDQGKIKAVFTQGDFV 133
>gi|340788093|ref|YP_004753558.1| inosine-5'-monophosphate dehydrogenase [Collimonas fungivorans
Ter331]
gi|340553360|gb|AEK62735.1| Inosine-5'-monophosphate dehydrogenase [Collimonas fungivorans
Ter331]
Length = 148
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+E+L KG+ + + +AV MA+ +IGSLVV++ G + G+ T R
Sbjct: 1 MKVSEILKVKGN----ILYTVTPETPLIEAVNTMAEKDIGSLVVMEFGT---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ + I G + V + M D IT+ D + ++M ++H R+VP++D R +
Sbjct: 54 EVMNAIHQNGGAVGSNTVRKHMDDSP--ITVTPDTEVNEVRRIMLERHARYVPIMDARTL 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G++S DV +AV++ Q E K L +IR
Sbjct: 112 LGVMSFYDVAKAVLDAQGFENKMLKAYIR 140
>gi|332531360|ref|ZP_08407266.1| XRE family transcriptional regulator [Hylemonella gracilis ATCC
19624]
gi|332039177|gb|EGI75597.1| XRE family transcriptional regulator [Hylemonella gracilis ATCC
19624]
Length = 152
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V+++L KG+ + +D + +A+ M++ +IGSLVV+ EQ + G+ T R
Sbjct: 1 MKVSDILRVKGN----TLYTISPEDLLANALDLMSEKDIGSLVVM---EQGKLVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-I 175
+ ++++V S TRV M ++ T D + +LM ++H R+ PV++ +
Sbjct: 54 EVIQQVVKNKGSVGDTRVRAAM--DSTPHTCAMDTELDEVRRLMLERHARYTPVMEKHML 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
+G+IS DV +AVVE Q E K L +IR
Sbjct: 112 MGVISFYDVAKAVVEAQDFENKLLKAYIR 140
>gi|398803410|ref|ZP_10562478.1| CBS domain-containing protein [Polaromonas sp. CF318]
gi|398096597|gb|EJL86918.1| CBS domain-containing protein [Polaromonas sp. CF318]
Length = 151
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ V ++L KG+ + + D+ + A + MA +IGSLVV++ G+ + G+ T R
Sbjct: 1 MKVLDILRVKGN----TLYTVQPDEPLAKAAQVMADKDIGSLVVMEHGD---LVGMLTFR 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIV 176
+ + IV G T V M D +T S+ + ++M ++H R++PV++ +++
Sbjct: 54 EVIVYIVKNGGEIGSTLVRTAMDDHP--LTCTSETELDEVRRMMLERHARYMPVMNQKVL 111
Query: 177 -GMISIVDVVRAVVEQQKGELKRLNEFIR 204
G+IS+ DV +AVV+ Q E K L +IR
Sbjct: 112 MGVISLYDVAKAVVDSQNFENKMLKAYIR 140
>gi|315425878|dbj|BAJ47531.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|315427736|dbj|BAJ49332.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343484693|dbj|BAJ50347.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 128
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
S T+ D V+ MA+ NIG +VVL+ G + G+ +ERD +R + R +V EI
Sbjct: 16 SSATLYDVVRIMAEQNIGFIVVLENG---RMVGVLSERDVVRTL--AERRDFGVKVGEIC 70
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQKG 194
+ +ITLP+DA++ A + M IRH+ V+D G++VG++S DV++ + Q+ G
Sbjct: 71 --KRDIITLPADASVEDAAEEMGRHRIRHIVVVDNAGKLVGVVSARDVLQELYAQESG 126
>gi|15921060|ref|NP_376729.1| hypothetical protein ST0826 [Sulfolobus tokodaii str. 7]
gi|15621844|dbj|BAB65838.1| hypothetical protein STK_08260 [Sulfolobus tokodaii str. 7]
Length = 127
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK-YTRVAEI 137
++ ++++ K M + +GS++V + GE + GIFT+RD +R G +P R+A
Sbjct: 17 ANTSIQEVCKLMMERGVGSVIVTENGEPK---GIFTDRDAVRAF-SMGLNPTDEVRLAST 72
Query: 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAV 188
M LIT+ D ++ A+ +MT IRH+PV D G+I+GM +I D+ +A+
Sbjct: 73 M---GNLITVDEDTDVFVAIDIMTKNKIRHLPVKDKEGKIIGMFAITDISKAL 122
>gi|365885552|ref|ZP_09424547.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285773|emb|CCD97078.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 142
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG KV S + T+ +A K +A IG+++V+ + GI +ER
Sbjct: 1 MTVRAILDTKGH-KVES---VEAQTTLAEAAKLLADRKIGAVLVMSG---TRMEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + +G + V+ +MT ++++ + M++MT+ RH+PVI+G +
Sbjct: 54 DIVRSLGERGAAALTEPVSSVMT--RRVVSCRPQDTVAEIMEMMTNGKFRHLPVIEGGLV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI DVV+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|260433864|ref|ZP_05787835.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417692|gb|EEX10951.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 145
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V +L +K D V + TV DA K +A+ IG++VV + G + + GI +ERD
Sbjct: 3 VQAILSSKATDGV---VTVAPSTTVSDAAKILAEKRIGTVVVSEDGGKTAM-GILSERDI 58
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ G V+ MT+ KL+T + + MT+ RH+PV+ DG++VG
Sbjct: 59 VRELAASGSGCLTEPVSAYMTE--KLVTATKQDKVQDVLARMTEGRFRHMPVVEDGQLVG 116
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
++++ D V+A + + E L I G
Sbjct: 117 IVTLGDAVKAQLSELAMEKDALQGMIMG 144
>gi|146277434|ref|YP_001167593.1| CBS domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555675|gb|ABP70288.1| CBS domain containing protein [Rhodobacter sphaeroides ATCC 17025]
Length = 144
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L TK DD V + +V A + ++ IG++VV + G++ G+ +ERD
Sbjct: 3 VQQILKTKSDDGV---VTVPPGSSVAQAAEVLSSRRIGAVVVSRDGKRPD--GMLSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ +G V IMT +K++T MQ+MT+ RH+PV+ +G +VG
Sbjct: 58 VRELGRRGPGCLSDTVESIMT--SKIVTCACSDEADGIMQIMTEGRFRHLPVMAEGEMVG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ISI DVV+A + + E L I+G
Sbjct: 116 LISIGDVVKARLSELSMEKDALEGMIKG 143
>gi|294084892|ref|YP_003551652.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664467|gb|ADE39568.1| CBS domain containing protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 140
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ +D +E V + + IG++VV + + GI +ERD +R + +G++ + +
Sbjct: 14 VTVNADSALETVVDMLVKWGIGTVVV--ADQNMQVLGILSERDIIRHL-SKGKTLEGMKA 70
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQK 193
++MT K+IT+ M LMT IRHVP+ D ++VG++SI DVV+ ++E+ +
Sbjct: 71 QDLMT--AKVITVDQQVTSSELMHLMTKNRIRHVPITKDKKLVGIVSIGDVVKRMLEKYE 128
Query: 194 GELKRLNEFI 203
E + + +FI
Sbjct: 129 RETELIKQFI 138
>gi|338738933|ref|YP_004675895.1| hypothetical protein HYPMC_2103 [Hyphomicrobium sp. MC1]
gi|337759496|emb|CCB65325.1| conserved protein of unknown function with 2 CBS domains
[Hyphomicrobium sp. MC1]
Length = 142
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+ ++L +KG S + DT+++ +A IG++V+L E +AGI +ERD
Sbjct: 3 IGQILKSKGR----SVMTASPADTLQEIALRLASRKIGAIVIL---ENNKLAGIISERDL 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R I G + MT + +I+ D I M+ MT RHVPV+ DG +VG
Sbjct: 56 IRLIAEHGPKALAMTANDGMTRD--VISCTRDCTIDGVMETMTKGRFRHVPVLEDGELVG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI DVV+ + + + E+ + +++
Sbjct: 114 IISIGDVVKHHIAEVQLEVTAMRDYL 139
>gi|118431896|ref|NP_148644.2| hypothetical protein APE_2489.1 [Aeropyrum pernix K1]
gi|116063219|dbj|BAA81505.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 148
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 7/113 (6%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ + DD V A K M ++ IGS++V+ ++ + GI TERD + +V + P RV
Sbjct: 24 VTVKPDDPVTRAAKLMVENLIGSVLVV--DDEGRLRGIVTERDIV-YVVSEAWDPTKHRV 80
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
EIMT EN ++ P D ++L ++ M++ ++RH+PV+D G VG+IS DV+
Sbjct: 81 WEIMT-ENPIVVRPDD-DLLTVVRKMSETNVRHLPVVDEKGAPVGIISFRDVL 131
>gi|51244818|ref|YP_064702.1| hypothetical protein DP0966 [Desulfotalea psychrophila LSv54]
gi|50875855|emb|CAG35695.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 625
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPG----EQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
D T++ A + MA N+ ++++ P + + AGI T+RD +++ +G S T V+
Sbjct: 166 DQTIQQAARTMAAENVSAILISPPENTSEDDEPFAGIITDRDLCSRVLAEGVSSD-TAVS 224
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRI-VGMISIVDVVR 186
++M+ + LI L S+A + AM M +I H+PV+ + +G+I I D+VR
Sbjct: 225 KVMSTD--LIFLDSNAYVFEAMLTMLRNNIHHLPVLRNKTPIGIIEITDIVR 274
>gi|145590453|ref|YP_001152455.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
gi|145282221|gb|ABP49803.1| putative signal-transduction protein with CBS domains [Pyrobaculum
arsenaticum DSM 13514]
Length = 128
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ--GRSPKYTRV 134
C +D+ +E AV M N+GS+VV+ GI TERD +R + + ++P RV
Sbjct: 15 CYADEPIECAVAKMYASNVGSVVVVD--RTGSPVGIITERDIVRLLAEEVDFKTP-LERV 71
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQ 192
A L+T D ++ M +K+IRH+PV++ GR++G++SI DV+RA+V +
Sbjct: 72 AR-----KNLVTASPDDTVIATAAKMIEKNIRHIPVVEGGRVIGVVSIRDVLRALVTAE 125
>gi|167647687|ref|YP_001685350.1| signal-transduction protein [Caulobacter sp. K31]
gi|167350117|gb|ABZ72852.1| putative signal-transduction protein with CBS domains [Caulobacter
sp. K31]
Length = 143
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V+++L KGD ++TV A + +G++VVL+ E + IAGI +ERD
Sbjct: 3 VSQILKDKGD----LVFTASPNETVGAAAALLHTRRVGAMVVLE--EDETIAGILSERDI 56
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
+R I +G ++ MT + ++ + + ++ MTD+ IRH+PV G R+ G
Sbjct: 57 VRVIAKEGAGALSKPISSCMTRD--VVFAQPEETVDALLERMTDRRIRHLPVCKGKRLAG 114
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
+ISI D+V+ + + + E + L +I
Sbjct: 115 IISIGDLVKYKISEAQAEAEGLKAYI 140
>gi|41408317|ref|NP_961153.1| hypothetical protein MAP2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118466251|ref|YP_881000.1| CBS domain-containing protein [Mycobacterium avium 104]
gi|417750273|ref|ZP_12398641.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|440777872|ref|ZP_20956656.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41396673|gb|AAS04536.1| hypothetical protein MAP_2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118167538|gb|ABK68435.1| CBS domain protein [Mycobacterium avium 104]
gi|336458247|gb|EGO37228.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|436721788|gb|ELP45863.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 142
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + D TV + + + + NIG++VV+ + + GI +ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
+R++ G S V++IMT T + + LMT +RHVPV+DG +++G
Sbjct: 56 VRQLHVHGASVLSRPVSKIMTTTLATCTKTDTVDEISV--LMTRNRVRHVPVLDGKKLIG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + E ++L +I
Sbjct: 114 IVSIGDVVKTRMEELEAEQQQLQSYI 139
>gi|429217476|ref|YP_007175466.1| signal transduction protein [Caldisphaera lagunensis DSM 15908]
gi|429134005|gb|AFZ71017.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Caldisphaera lagunensis DSM 15908]
Length = 133
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
++ VL K D + + + T+ + K M ++ IGS+V+ P ++ + GIFTERD
Sbjct: 1 MSSVLSMKVSDFMKKAITTFPNVTIAEIAKIMYENRIGSVVITSPDDK--VLGIFTERD- 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIV 176
L ++V +G P V ++MT LIT + A+ LM +K++RH+PV+D G+I
Sbjct: 58 LTRVVAEG-VPLDKHVGDVMTKNPVLIT--QSEGLSKAISLMYEKNVRHLPVVDNEGKIK 114
Query: 177 GMISIVDV 184
G+IS+ D+
Sbjct: 115 GIISVRDL 122
>gi|399523073|ref|ZP_10763733.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109101|emb|CCH40294.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 639
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 18/122 (14%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPG------------EQQH--IAGIFTERDYLRKIVGQ 125
D ++ + M +H++ S++V+ PG EQQ +AGI T+RD ++V
Sbjct: 167 DTPIQQVAQVMTEHSVSSVIVVDPGTRWPDPNQVDVAEQQSQVMAGILTDRDLRTRVVAA 226
Query: 126 GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
G P T V++IMT ITL +D ++ AM M +I H+PV+ R VG++++ D+
Sbjct: 227 GL-PSDTPVSQIMTPNP--ITLQADDSVFEAMLCMLRNNIHHLPVLHRRRPVGVVALADI 283
Query: 185 VR 186
+R
Sbjct: 284 IR 285
>gi|414175058|ref|ZP_11429462.1| hypothetical protein HMPREF9695_03108 [Afipia broomeae ATCC 49717]
gi|410888887|gb|EKS36690.1| hypothetical protein HMPREF9695_03108 [Afipia broomeae ATCC 49717]
Length = 147
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 78 RSDDTVEDAVKNMAQHNIGSLVV--LKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
R ++TV A + + N+G+LVV + E G+F+ERD +R + G++ +V+
Sbjct: 18 RMNETVATAARLLRNDNVGALVVKDVCRTEGNVAVGMFSERDVVRAVSEHGQAGLAMKVS 77
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDV 184
+++ + KL++ S +I H +LM D HIRHVPVID ++G+ISI D+
Sbjct: 78 ALISVQ-KLVSCQSTDSIEHVRELMIDNHIRHVPVIDDHTLIGVISIRDI 126
>gi|336176610|ref|YP_004581985.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
gi|334857590|gb|AEH08064.1| putative signal transduction protein with CBS domains [Frankia
symbiont of Datisca glomerata]
Length = 267
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ +A M H +G+L+V ++ H+ GI T+RD + + V +G P T V +MT E
Sbjct: 20 TIGEAAHEMDLHGVGALLVTD--DRDHLVGIVTDRDIVLRGVARG-VPMETSVDRLMTTE 76
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVV 185
+ TLP DA + A ++ D +R +PV+DG RIVG++SI D++
Sbjct: 77 --VFTLPVDAELDRAYEVFRDHALRRLPVLDGDRIVGVLSIDDLL 119
>gi|126459277|ref|YP_001055555.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126248998|gb|ABO08089.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 127
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 11/123 (8%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG--RSPK 130
+ + C D+ VE AV M N+GS+VVL+ +AGI TERD +R + + ++P
Sbjct: 10 TVISCYVDEPVECAVAKMYAANVGSVVVLE--RDGRLAGIVTERDIVRFLAQEVDLKTP- 66
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
+VA ++IT D ++ A M + +IRH+PV++G R++G+ISI DV+RA++
Sbjct: 67 LGQVAR-----KQVITASPDEAVVSAAVKMIENNIRHMPVVEGGRVIGVISIRDVLRALL 121
Query: 190 EQQ 192
+
Sbjct: 122 AAE 124
>gi|126737918|ref|ZP_01753648.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126721311|gb|EBA18015.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 144
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K S + D V DA + ++ IG+++V GE GI +ERD +R++ G
Sbjct: 11 KEASVITVTPDTLVSDAARLLSDKKIGTVMVSSDGEAAD--GILSERDIVRELGQNGPGC 68
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
V+ MT +KL+T + +N+ ++ MT RH+PV+ DG++ G+IS+ DVV+A
Sbjct: 69 LTDPVSSYMT--SKLVTCTAQSNVEEVLKQMTTGRFRHMPVLEDGKLKGLISLGDVVKAQ 126
Query: 189 VEQQKGELKRLNEFIRG 205
+ + E L I G
Sbjct: 127 LAEVAMEKDALEGMIMG 143
>gi|333910613|ref|YP_004484346.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751202|gb|AEF96281.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 176
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 15/138 (10%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
++ TV D M + IG +VV++ + GI TERD + IV + PK V +IM
Sbjct: 16 TNTTVYDVANIMKEKKIGCVVVVEKDSKP--LGIVTERDLVINIVAKNLKPKDVLVKDIM 73
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR-------AVVE 190
T KLIT+ +A ++ A + M +K+I+ +PV++G +++G+I++ D+ + + E
Sbjct: 74 T--TKLITISPNATLMDAARKMAEKNIKRLPVVEGDKLLGIITVSDITKISPKIFEIMYE 131
Query: 191 QQK--GELK-RLNEFIRG 205
K GEL R +E+I G
Sbjct: 132 MSKIGGELPYRGDEYIEG 149
>gi|451982233|ref|ZP_21930554.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
gi|451760526|emb|CCQ91836.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
Length = 139
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
+T++DA + M + +GSLVV+ G++ GI TE D+ RK+V +G PK +V +IMT
Sbjct: 28 NTIKDAAEFMHEKQVGSLVVVN-GKKP--VGIVTETDFARKVVAKGLDPKTAKVGDIMT- 83
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVV 185
L T+ ++L A +LM K IRH+ V+D +VG++++ ++V
Sbjct: 84 -TPLQTIDCHESVLDANKLMAKKKIRHLVVMDKEELVGIVTVHNLV 128
>gi|163800688|ref|ZP_02194588.1| hypothetical protein 1103602000593_AND4_00458 [Vibrio sp. AND4]
gi|159175037|gb|EDP59834.1| hypothetical protein AND4_00458 [Vibrio sp. AND4]
Length = 629
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 11/115 (9%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPG-------EQQHIAGIFTERDYLRKIVGQGRSPKYT 132
D ++++A + MAQ N+ SL++++P Q + GI T+RD +++ +G SP+
Sbjct: 166 DQSIQEAAQLMAQDNVSSLLIVEPDFVLDEDDPQSPVVGIITDRDLCTRVLAEGLSPQ-D 224
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
V+ +MT E +I+L +A + AM M ++ H+PV+ D +G+I D+VR
Sbjct: 225 EVSTVMTTE--VISLDHNAYVYEAMLTMLRSNVHHLPVVKDQMPIGVIEATDIVR 277
>gi|88813078|ref|ZP_01128320.1| isocitrate dehydrogenase [Nitrococcus mobilis Nb-231]
gi|88789711|gb|EAR20836.1| isocitrate dehydrogenase [Nitrococcus mobilis Nb-231]
Length = 586
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 26/193 (13%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPTEEKGLENISVA 60
MQG + + QE ++ Q R + E R+ S +I+S +P
Sbjct: 413 MQGKVDLAKYQQERMEAI----EQDRRIRELRRVSSPLEEMIASGRTP------------ 456
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
T GD S +C +D VEDA+ M + IGS V+ +P Q GI T+RD +
Sbjct: 457 ---HTVGDLMNPSPICVPADTLVEDAMHLMREKRIGS-VITRP-RQDGQWGIMTQRDVIS 511
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGM 178
+IV R P+ +V ++ + LIT+P D ++ M+ ++IR V +D +G+
Sbjct: 512 RIVSANRQPRTVKVGDVAS--KPLITVPVDMSLHDCADKMSSQNIRRVVAVDQNNEPIGI 569
Query: 179 ISIVDVVRAVVEQ 191
IS D+ A VEQ
Sbjct: 570 ISDTDIF-ASVEQ 581
>gi|354556671|ref|ZP_08975962.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
gi|353551349|gb|EHC20754.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
Length = 209
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 62 VLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121
++M D + RS TV AVK M I +L+V + Q GI T+ D + +
Sbjct: 1 MMMKVADIMTKDVITIRSSATVSMAVKLMRDKKIHTLIVQR-RHPQDAYGIITDSDIVNE 59
Query: 122 IVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMISI 181
++ G++PK RV EIMT + L D + +A +L + IR PVI ++G++SI
Sbjct: 60 VIASGKNPKQVRVYEIMT--KPCLVLNPDLGVEYAAKLFKNHGIRCAPVIKDELLGIVSI 117
Query: 182 VDVV 185
VD++
Sbjct: 118 VDIL 121
>gi|302037171|ref|YP_003797493.1| hypothetical protein NIDE1839 [Candidatus Nitrospira defluvii]
gi|300605235|emb|CBK41568.1| conserved protein of unknown function, contains CBS domain pair
[Candidatus Nitrospira defluvii]
Length = 140
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ +V DA MA+ +GS ++ + I G+FTERD + ++VG+ R P+ ++ ++MT
Sbjct: 19 NHSVLDAATLMAEEFVGSALITSSSK---ITGVFTERDLMMRVVGRKRDPEKVKIKDVMT 75
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVVEQQKGELKR 198
+N + P D + + LM + RH+ V D +G++S+ D+V ++E+++ +
Sbjct: 76 -KNMVTVNPKDTA-HYCLNLMKEHRCRHLLVFDNEEFIGIVSLRDMVALLMEEKEALIAY 133
Query: 199 LNEFI 203
L+++I
Sbjct: 134 LHQYI 138
>gi|408380367|ref|ZP_11177951.1| hypothetical protein QWE_22271 [Agrobacterium albertimagni AOL15]
gi|407745580|gb|EKF57112.1| hypothetical protein QWE_22271 [Agrobacterium albertimagni AOL15]
Length = 144
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 85 DAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKL 144
+A + + +H IG++VV+ G + I GIFTERD +R I G+ V+ MT +
Sbjct: 27 EAARVLEEHKIGAVVVV--GMESRIVGIFTERDVVRAIGTAGKDAFDQPVSAFMT--ANV 82
Query: 145 ITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQKGELKRLNEFI 203
+ + M++M+ + RHVPV D G++ G+ISI DVV++ + + + E + + +I
Sbjct: 83 YRCREETGVNELMEMMSSRRFRHVPVEDNGKLSGIISIGDVVKSRIREIEQEAEHIKAYI 142
Query: 204 RG 205
G
Sbjct: 143 AG 144
>gi|374635448|ref|ZP_09707047.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
gi|373562321|gb|EHP88536.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
Length = 176
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D T D M +NIG +VV++ + GI TERD + IV + PK + +IMT
Sbjct: 17 DTTAYDVANIMKDNNIGCVVVVE--KDSKPLGIVTERDLVINIVAKNLKPKDVLIKDIMT 74
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR---------AVV 189
KL+ + A ++ A + MT+K+++ +PV++G +++G+I++ D+ + + +
Sbjct: 75 --TKLVVISPTATLMDAAKKMTEKNVKRLPVVEGDKLLGIITVSDITKISPKIFEIMSEM 132
Query: 190 EQQKGELK-RLNEFIRG 205
+ GEL R +E+I G
Sbjct: 133 SKMGGELPYRGDEYIEG 149
>gi|172034825|ref|YP_001798602.1| hypothetical protein cce_5222 [Cyanothece sp. ATCC 51142]
gi|171701589|gb|ACB54568.1| unknown [Cyanothece sp. ATCC 51142]
Length = 210
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 62 VLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121
++M D + RS TV AVK M I +L+V + Q GI T+ D + +
Sbjct: 2 MMMKVADIMTKDVITIRSSATVSMAVKLMRDKKIHTLIVQR-RHPQDAYGIITDSDIVNE 60
Query: 122 IVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMISI 181
++ G++PK RV EIMT + L D + +A +L + IR PVI ++G++SI
Sbjct: 61 VIASGKNPKQVRVYEIMT--KPCLVLNPDLGVEYAAKLFKNHGIRCAPVIKDELLGIVSI 118
Query: 182 VDVV 185
VD++
Sbjct: 119 VDIL 122
>gi|254459705|ref|ZP_05073121.1| CBS domain protein [Rhodobacterales bacterium HTCC2083]
gi|206676294|gb|EDZ40781.1| CBS domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 144
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
V ++L +K D V + + V DA + +A+ IG++VV G+ GI +ERD
Sbjct: 3 VQKILNSKASDAV---VTVKPGSLVRDAAQILAKKQIGTVVVSSSGDTAD--GILSERDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R++ G S +V + MT +KL+T + MT RH+PV+ DG+++G
Sbjct: 58 VRELAAHGASCLAEKVDDYMT--SKLVTCKLSDTADSVLHQMTKGRFRHMPVVEDGQLIG 115
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRG 205
+I++ DVV+A + + E L I G
Sbjct: 116 LITLGDVVKARLSELSMEKDALQGMIMG 143
>gi|407784730|ref|ZP_11131879.1| hypothetical protein B30_01765 [Celeribacter baekdonensis B30]
gi|407204432|gb|EKE74413.1| hypothetical protein B30_01765 [Celeribacter baekdonensis B30]
Length = 139
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
W +D V + K M + +IG++ V G+ + G+ T+RD ++V +GR P T
Sbjct: 12 DW--ASADMPVSEMAKMMRKDDIGAIPV---GKDDKLIGMVTDRDIALRVVAEGRDPAKT 66
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--RIVGMISIVDVVRAVVE 190
EIMT ++ + + A+ LM K IR +PVID R+VGM+S+ D+ AV
Sbjct: 67 TAEEIMT--KGIVYCRTTETVEDAVHLMDQKKIRRLPVIDDNKRLVGMLSLGDISHAVGR 124
Query: 191 QQKGEL 196
+ GEL
Sbjct: 125 ELSGEL 130
>gi|418299566|ref|ZP_12911399.1| hypothetical protein ATCR1_18605 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355535031|gb|EHH04327.1| hypothetical protein ATCR1_18605 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 144
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ +A + H IGS+VV + GIFTERD ++ + GQG + V+ MT
Sbjct: 24 SIGEAAATLNAHKIGSVVVTDA--DGVVLGIFTERDLVKIVAGQGAASLQQSVSVAMT-- 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKRLN 200
+I ++ M++MT RHVPV +GR+ G+ISI DVV+A + + + E + +
Sbjct: 80 KNVIRCHHNSTTDELMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIK 139
Query: 201 EFIRG 205
+I G
Sbjct: 140 AYIAG 144
>gi|327310289|ref|YP_004337186.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326946768|gb|AEA11874.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 140
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TVE A + MA +N+G LV++ P E + G+ +ERD +R I G++P V + T
Sbjct: 19 TVEQAAEAMANNNVGLLVIVDPKEPKKPIGVISERDIIRTI--AGKAPLTVTVDKAGTMG 76
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
N I + D I A LM HIRH+ V+D G +VG++SI D++
Sbjct: 77 N-FIWIREDETIYRAAYLMRKHHIRHLVVLDDKGELVGVLSIRDLI 121
>gi|239826078|ref|YP_002948702.1| hypothetical protein GWCH70_0527 [Geobacillus sp. WCH70]
gi|239806371|gb|ACS23436.1| CBS domain containing protein [Geobacillus sp. WCH70]
Length = 147
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 64 MTKGDDKVGSWLC-----CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
M ++KV + + TV++A + M+Q NIG+L V++ G+ + G+ T+RD
Sbjct: 1 MNNNNNKVQDVMTKNVATVSPNQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDI 57
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+ QG+ P T V+EIMT N+++T + ++ A +M IR +P++ + +I G
Sbjct: 58 TLRTSAQGKDPASTPVSEIMT--NRVVTGTPNMSVQEAASVMAQHQIRRLPIVENNQIQG 115
Query: 178 MISIVDV 184
++++ D+
Sbjct: 116 IVALGDI 122
>gi|259415648|ref|ZP_05739569.1| cyclic nucleotide-binding protein [Silicibacter sp. TrichCH4B]
gi|259348878|gb|EEW60640.1| cyclic nucleotide-binding protein [Silicibacter sp. TrichCH4B]
Length = 602
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 48 PTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQ 107
P GL I+VA+ LM++ D V C + ++ A + M H+I S+ V +Q
Sbjct: 128 PPNGSGLATITVAQ-LMSR--DPV----ICAPETSIRTAAEQMYHHHISSICVC---DQN 177
Query: 108 HIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRH 167
GI T RD K+V G P +A IMT + ++TL +A + + LM +++I H
Sbjct: 178 GFHGIVTLRDMNSKVVVGGADP-LAPIATIMTQD--VLTLAPEALVTDVLHLMVERNIHH 234
Query: 168 VPVIDGR-IVGMISIVDVVRA 187
VP++DG ++G+++ D+ RA
Sbjct: 235 VPIVDGAGLLGIVTQTDLTRA 255
>gi|167043446|gb|ABZ08148.1| putative CBS domain protein [uncultured marine microorganism
HF4000_APKG1C9]
Length = 147
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
CC+ + +++DA + M ++ G + V+ ++ + G+ T+RD + V +G S + TRV
Sbjct: 13 CCKENQSLQDAARLMIDNDCGQIPVVD--DEGGLVGVITDRDVCCRAVAEGMSAE-TRVG 69
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQK 193
++MT ++++ D ++ + M +R VPVI DG+ GM+S DV R + +
Sbjct: 70 DVMT--RSVVSVTPDTSLEDCLASMEKNQVRRVPVIDDDGKCCGMVSQADVARTGNDAKT 127
Query: 194 GEL 196
EL
Sbjct: 128 AEL 130
>gi|134084625|emb|CAK97501.1| unnamed protein product [Aspergillus niger]
Length = 609
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV+DA M +H+ +L+V +Q I GIFT +D + +++ G P V +MT
Sbjct: 234 TVKDAAALMREHHTTALLV---QDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPH 290
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQ 191
PSD +I A++ M D H ++PV++ G IVGM+ ++ + A +EQ
Sbjct: 291 PDFA--PSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQ 340
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K L + + ++ +A + MA ++V + IAGIFT +D ++VG G
Sbjct: 52 KPSQALQIKPNTSIAEAAQLMAAKREDCVLVTD--DDDRIAGIFTAKDLAFRVVGTGLKA 109
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIV 182
+ V+EIMT +N L +D + A+ LM K RH+PV+D I G++ I
Sbjct: 110 REITVSEIMT-KNPLCAR-TDTSATDALDLMVRKGFRHLPVMDENQDISGVLDIT 162
>gi|146341836|ref|YP_001206884.1| hypothetical protein BRADO4965 [Bradyrhizobium sp. ORS 278]
gi|146194642|emb|CAL78667.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
Length = 139
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 64 MTKGD---DKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVV--LKPGEQQHIAGIFTERDY 118
M GD +K + R ++TV A + M N+ +LVV + E AG+FTERD
Sbjct: 1 MKVGDILRNKTARVITVRMNETVGVAAQLMRASNVSALVVKDVVRTEGNTAAGMFTERDV 60
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
+R I G + RV+++++ + +LI+ ++ ++ H LM HIRH+PVI D + G
Sbjct: 61 VRAIAEHGAAGVTMRVSQLISPQ-RLISCSTEDSLEHVRHLMNVHHIRHLPVIVDFALAG 119
Query: 178 MISIVDVVRAVVEQQ 192
+IS+ DV A E +
Sbjct: 120 VISMRDVSSAFDEAE 134
>gi|218295637|ref|ZP_03496433.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus aquaticus Y51MC23]
gi|218243796|gb|EED10323.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Thermus aquaticus Y51MC23]
Length = 580
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A + MAQ + SL+V + GI T+RD +++ Q R P T V E+ T
Sbjct: 154 TVAEAARRMAQEGVSSLLV-----EGEPLGILTDRDLRNRVLAQER-PSSTPVGEVAT-- 205
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRA 187
L LP+D + A+ M ++ I H+P+++G ++VG+++ D+V A
Sbjct: 206 RPLFALPADTPLYEALAAMVERGIHHLPLLEGAKVVGVVTHTDLVPA 252
>gi|94971756|ref|YP_593804.1| hypothetical protein Acid345_4731 [Candidatus Koribacter versatilis
Ellin345]
gi|94553806|gb|ABF43730.1| CBS domain containing membrane protein [Candidatus Koribacter
versatilis Ellin345]
Length = 145
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+ M + G++ V++ E +AG+F+ERD +RK GRS + T V E M+
Sbjct: 19 SVADAITMMIDRHAGAVAVVE--ENHVVAGMFSERDVMRKFALSGRSAESTPVREYMS-- 74
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKRL 199
++ + A+Q+M + RH+P++ DG+++G+ISI V+ A V+ +L+R
Sbjct: 75 QYVVMGSPETTPAEALQVMIESRHRHLPIVDSDGKLLGVISIRHVLEAQVDLLTEQLRRS 134
Query: 200 NE 201
E
Sbjct: 135 EE 136
>gi|422295637|gb|EKU22936.1| hypothetical protein NGA_2021300 [Nannochloropsis gaditana CCMP526]
Length = 549
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 100 VLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQL 159
VL E + + GIFT +D L ++V Q SP +T V+ +MT T+ ++A +L A+ +
Sbjct: 197 VLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAVSSVMTARPD--TIEAEATVLEALYM 254
Query: 160 MTDKHIRHVPVIDGR---IVGMISIVDVVRAVVEQQKG 194
M + H H+PV D R +VG++ ++++V V ++ G
Sbjct: 255 MRENHYLHLPVTDSRDGSVVGLVDVMEIVHVVCGREDG 292
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 82 TVEDAVKNMAQHNI-GSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
+V + VK M +LV + G+ + GI T+ D R+++ Q R+ T ++ IMT+
Sbjct: 8 SVTEVVKAMVHKRTDAALVTSRTGK---VLGILTDNDVTRRVIAQYRAETETPISTIMTE 64
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISI 181
K ++ SD+ + A+ M RH+PV+ G++VG++ I
Sbjct: 65 NPKSVSQDSDS--IDALTTMVKGRFRHLPVMGPHGQVVGLLDI 105
>gi|347523753|ref|YP_004781323.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460635|gb|AEM39071.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 122
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 73 SWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132
S + R ++ V + VK M +H++GS++++ ++ +AGIFTERD L ++V +G S +
Sbjct: 4 SLVTARPEEPVREVVKRMVEHSVGSVLIVD--DEGRLAGIFTERD-LARLVARGASLEEP 60
Query: 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAV 188
V++ M+ +T D + M + +RH+PV+D GR +G+ISI DV+R +
Sbjct: 61 -VSKYMS--RSPVTASPDEPLAKIATKMIEHWLRHIPVVDEQGRPLGVISIRDVLRVI 115
>gi|126459004|ref|YP_001055282.1| hypothetical protein Pcal_0381 [Pyrobaculum calidifontis JCM 11548]
gi|126248725|gb|ABO07816.1| CBS domain containing protein [Pyrobaculum calidifontis JCM 11548]
Length = 688
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 15/113 (13%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI---VGQGRSPKYTRVAE 136
D ++++A+ MA++NIG L V++ G+ + G+ +E D ++ + V GR VAE
Sbjct: 586 DKSLKEAIDLMAKYNIGFLPVVEDGK---LVGVLSETDIVKAVAKGVDLGRP-----VAE 637
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
NK I + A + A +LM +IRH+P++ DG++VG+IS+ DV++A+
Sbjct: 638 F---ANKPIVVDKSATLRDAAELMVKYNIRHIPIVEDGKVVGVISVRDVLKAI 687
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 66 KGDDKVGSWL----CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121
K D+ G++ C + V + + Q+N+ ++ V + G+ GI R+ + +
Sbjct: 498 KLDEPAGNYAVKTSCIDAKAPVTEVFVALEQYNVRAVPVCEGGKP---VGIVEARELVNE 554
Query: 122 IVGQGRSPKYTRVAEIMT----DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIV 176
+G RS +VA +L+T+ D ++ A+ LM +I +PV+ DG++V
Sbjct: 555 ALGL-RSVLKKKVALRFNVYDAAPRELVTIAPDKSLKEAIDLMAKYNIGFLPVVEDGKLV 613
Query: 177 GMISIVDVVRAVVE 190
G++S D+V+AV +
Sbjct: 614 GVLSETDIVKAVAK 627
>gi|358373443|dbj|GAA90041.1| CBS and PB1 domain protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV+DA M +H+ +L+V +Q I GIFT +D + +++ G P V +MT
Sbjct: 234 TVKDAAALMREHHTTALLV---QDQGSITGIFTSKDIVLRVIAPGLDPSTCSVVRVMTPH 290
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQ 191
PSD +I A++ M D H ++PV++ G IVGM+ ++ + A +EQ
Sbjct: 291 PDFA--PSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMVDVLKLTYATLEQ 340
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K L + + ++ +A + MA ++V + IAGIFT +D ++VG G
Sbjct: 52 KPSQALQIKPNTSIAEAAQLMAAKREDCVLVTD--DDDRIAGIFTAKDLAFRVVGTGLKA 109
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIV 182
+ V+EIMT +N L +D + A+ LM K RH+PV+D I G++ I
Sbjct: 110 REITVSEIMT-KNPLCAR-TDTSATDALDLMVRKGFRHLPVMDENQDISGVLDIT 162
>gi|258651285|ref|YP_003200441.1| signal transduction protein with CBS domains [Nakamurella
multipartita DSM 44233]
gi|258554510|gb|ACV77452.1| putative signal transduction protein with CBS domains [Nakamurella
multipartita DSM 44233]
Length = 143
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D +V DAV + + IG++VV + I+GI +ERD + + G + V +IMT
Sbjct: 20 DASVADAVATLHERRIGAVVV--SADDASISGILSERDVVGALATMGPAVLTATVRQIMT 77
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKGELKR 198
E ++T + + MTDK RH+PV+ DG++ G++SI DVV+ V++ + E +
Sbjct: 78 AE--VLTCEPEDELRSLAITMTDKRFRHMPVVVDGKLAGIVSIGDVVKHRVDELQTEHDQ 135
Query: 199 LNEFI 203
L ++I
Sbjct: 136 LMDYI 140
>gi|421502435|ref|ZP_15949389.1| hypothetical protein A471_04075 [Pseudomonas mendocina DLHK]
gi|400346867|gb|EJO95223.1| hypothetical protein A471_04075 [Pseudomonas mendocina DLHK]
Length = 639
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 18/122 (14%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPG------------EQQH--IAGIFTERDYLRKIVGQ 125
D ++ + M +H + S++V+ PG EQQ+ +AGI T+RD ++V
Sbjct: 167 DTPIQQVAQVMTEHGVSSVIVVDPGTRWPDPQQVDVAEQQNQVMAGILTDRDLRTRVVAA 226
Query: 126 GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
G P T V+++MT +TL +D ++ AM M +I H+P++ R VG++++ D+
Sbjct: 227 GL-PSSTPVSQVMTPNP--VTLQADDSVFEAMLCMLRNNIHHLPILHRRRPVGVVALADI 283
Query: 185 VR 186
VR
Sbjct: 284 VR 285
>gi|365890914|ref|ZP_09429396.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365333221|emb|CCE01927.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 142
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG KV S + T+ +A K +A IG+++V+ + GI +ER
Sbjct: 1 MTVRAILDTKGH-KVES---VEAQTTLAEAAKLLADRRIGAVLVMAGTRME---GILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + +G + V+ +MT ++++ + M++MT+ RH+PVI+G +
Sbjct: 54 DIVRSLGERGAAALTEPVSSVMT--RRVVSCRPADTVAEIMEMMTNGKFRHLPVIEGGLV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI DVV+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|301107764|ref|XP_002902964.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098082|gb|EEY56134.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 438
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDD--TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFT 114
+ A L+ K +V L R DD TV +AV+ MA+ + G+++V+ ++Q + GIFT
Sbjct: 300 VVTAATLLKKKHKRVKLILNTRPDDNITVAEAVEEMAKRDFGAVLVV--DKEQRVLGIFT 357
Query: 115 ERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--- 171
ERDY+RK++ + + P V ++M+ + ++ + + + L + RH PVI
Sbjct: 358 ERDYIRKVLFEVKDPTKLLVTDVMSTVDSVLQI--EDPLEKCWDLAATSNCRHFPVIGVL 415
Query: 172 ----DGRIVGMISIVDVV 185
+ + G++SI D+V
Sbjct: 416 RQDREKELAGILSIKDIV 433
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 34/139 (24%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
W +TV DAV M + NIGSL+V K Q+ I GI TERD L+KI SP+
Sbjct: 118 WESIAGTETVHDAVLTMVERNIGSLIVTKA--QEGIVGIVTERDILKKI-----SPRT-- 168
Query: 134 VAEIMTDE--------NKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVG-------- 177
+MT+E + ++ + ++ A+ MT ++IRH+ V+ G +
Sbjct: 169 ---VMTEEKFVHNVMSSHIMCIHPSTTVIDALATMTKENIRHLAVVSGDMTSAVKRGSVQ 225
Query: 178 ------MISIVDVVRAVVE 190
++SI D+VRA E
Sbjct: 226 EEDMRCVLSITDIVRAFAE 244
>gi|119871878|ref|YP_929885.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
gi|119673286|gb|ABL87542.1| putative signal-transduction protein with CBS domains [Pyrobaculum
islandicum DSM 4184]
Length = 139
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 61 EVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120
E+ + D V + + + DD ++D M ++ +GS+V++ E+ GI TERD L
Sbjct: 8 ELPLRVSDVMVRNVITAKKDDKIKDIAIKMYENKVGSVVIV--DEEGKPVGIITERD-LV 64
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGM 178
+V + +P T +MT EN I + DA I AM+ M ++IRH+PV+D GR+VGM
Sbjct: 65 YVVARSLAPD-TPAWMVMT-ENP-IVIREDALITEAMEKMRVQNIRHLPVVDTSGRLVGM 121
Query: 179 ISIVDVVRAVV 189
+S DVV VV
Sbjct: 122 LSFRDVVDFVV 132
>gi|456357013|dbj|BAM91458.1| hypothetical protein S58_54810 [Agromonas oligotrophica S58]
Length = 147
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
K G+ + RS D V +A++ M + + S++V+ G + GI T+ D K++ G
Sbjct: 11 KTGAVIHVRSGDMVVEALRQMRDNRVRSVLVIDDGV---LVGIVTQGDCAIKVLLPGLDA 67
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAV 188
K T V ++MT + +T+ D + M +M+ + RH+PV+D G++VG+ISI DVV+ +
Sbjct: 68 KQTPVGQVMTGDP--VTVKPDHRLDSCMAMMSQRSFRHLPVLDAGKVVGVISIGDVVKNI 125
Query: 189 VEQQKGELKRLNEFI 203
+ + + L +I
Sbjct: 126 IRDLEHNVDDLMGYI 140
>gi|387219401|gb|AFJ69409.1| hypothetical protein NGATSA_2021300 [Nannochloropsis gaditana
CCMP526]
Length = 534
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 99 VVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQ 158
VL E + + GIFT +D L ++V Q SP +T V+ +MT T+ ++A +L A+
Sbjct: 181 AVLVVDEDESLVGIFTPKDMLGRVVSQELSPDFTAVSSVMTARPD--TIEAEATVLEALY 238
Query: 159 LMTDKHIRHVPVIDGR---IVGMISIVDVVRAVVEQQKG 194
+M + H H+PV D R +VG++ ++++V V ++ G
Sbjct: 239 MMRENHYLHLPVTDSRDGSVVGLVDVMEIVHVVCGREDG 277
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 109 IAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHV 168
+ GI T+ D R+++ Q R+ T ++ IMT+ K ++ SD+ + A+ M RH+
Sbjct: 18 VLGILTDNDVTRRVIAQYRAETETPISTIMTENPKSVSQDSDS--IDALTTMVKGRFRHL 75
Query: 169 PVID--GRIVGMISIV 182
PV+ G++VG++ I
Sbjct: 76 PVMGPHGQVVGLLDIA 91
>gi|352683205|ref|YP_004893729.1| hypothetical protein TTX_2038 [Thermoproteus tenax Kra 1]
gi|350276004|emb|CCC82651.1| conserved protein with 2 CBS domains [Thermoproteus tenax Kra 1]
Length = 140
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 7/117 (5%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
CR +T+ AV M +NIGS++V+ ++ GIFTERD +R ++ +G S T + +
Sbjct: 26 CRGTETIRCAVSKMYAYNIGSVLVVD--DRGAPIGIFTERDLVR-VIAEGISLD-TPLEK 81
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQ 192
+ E +LI + + +I A Q M + IRH+PV+D GR+VG++SI D +R ++ +
Sbjct: 82 LA--EKELIKVYPNDSIYIAAQKMIEHGIRHIPVVDAGRVVGILSIRDALRYLISLE 136
>gi|146309557|ref|YP_001190022.1| hypothetical protein Pmen_4543 [Pseudomonas mendocina ymp]
gi|145577758|gb|ABP87290.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Pseudomonas mendocina ymp]
Length = 639
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 18/122 (14%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPG------------EQQH--IAGIFTERDYLRKIVGQ 125
D ++ + M +H + S++V+ PG EQQ+ +AGI T+RD ++V
Sbjct: 167 DTPIQQVAQVMTEHGVSSVIVVDPGTRWPDPQQVDVAEQQNQVMAGILTDRDLRTRVVAA 226
Query: 126 GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
G P T V+++MT +TL +D ++ AM M +I H+P++ R VG++++ D+
Sbjct: 227 GL-PSSTPVSQVMTPNP--VTLQADDSVFEAMLCMLRNNIHHLPILHRRRPVGVVALADI 283
Query: 185 VR 186
VR
Sbjct: 284 VR 285
>gi|254774594|ref|ZP_05216110.1| CBS domain-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 142
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+A+VL KG + + D TV + + + + NIG++VV+ + + GI +ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVG 177
+R++ G S V++IMT T + + LMT +RHVPV+DG +++G
Sbjct: 56 VRQLHVHGASVLSRPVSKIMTTTLATCTKTDTVDEISV--LMTRNRVRHVPVLDGKKLIG 113
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFI 203
++SI DVV+ +E+ + E ++L +I
Sbjct: 114 IVSIGDVVKIRMEELEAEQQQLQSYI 139
>gi|421600925|ref|ZP_16043838.1| hypothetical protein BCCGELA001_23284 [Bradyrhizobium sp.
CCGE-LA001]
gi|404266971|gb|EJZ31738.1| hypothetical protein BCCGELA001_23284 [Bradyrhizobium sp.
CCGE-LA001]
Length = 142
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVV--LKPGEQQHIAGIFTERDYLRKIVGQGR 127
K + R ++TV A K M +NI +LVV + E G+FTERD +R + G
Sbjct: 10 KTPRVVTVRMNETVGIAAKLMRANNISALVVKDVVRSEGNTAVGMFTERDVVRAVAEHGA 69
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
+ RV+++++ + +L++ S I H LM HIRH+PVID ++ +IS+ D+
Sbjct: 70 NAVNVRVSQLVSVQ-QLVSCTSSDTIEHVRHLMNRHHIRHLPVIDDYSLISVISMRDIAA 128
Query: 187 AVVEQQKGE 195
AV E G
Sbjct: 129 AVDEAINGS 137
>gi|146339957|ref|YP_001205005.1| hypothetical protein BRADO2961 [Bradyrhizobium sp. ORS 278]
gi|146192763|emb|CAL76768.1| conserved hypothetical protein with 2 CBS domains [Bradyrhizobium
sp. ORS 278]
Length = 142
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
++V +L TKG KV S + T+ +A K +A IG+++V+ + GI +ER
Sbjct: 1 MTVRAILDTKGH-KVES---VEAQTTLAEAAKLLADRKIGAVLVMSG---TRMEGILSER 53
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +R + +G V+ +MT ++++ + M++MT+ RH+PVI+G +
Sbjct: 54 DIVRSLGERGAGALTEPVSSVMT--RRVVSCRPQDTVAEIMEMMTNGKFRHLPVIEGGLV 111
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFIR 204
VG+ISI DVV+ V++ + E + L ++I+
Sbjct: 112 VGLISIGDVVKWRVQEYENEQEALRQYIK 140
>gi|384220285|ref|YP_005611451.1| hypothetical protein BJ6T_66140 [Bradyrhizobium japonicum USDA 6]
gi|354959184|dbj|BAL11863.1| hypothetical protein BJ6T_66140 [Bradyrhizobium japonicum USDA 6]
Length = 142
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVV--LKPGEQQHIAGIFTERDYLRKIVGQGR 127
K + R ++TV A K M +NI +LVV + E G+FTERD +R + G
Sbjct: 10 KTPRVVTVRMNETVGIAAKLMRANNISALVVKDVVRSEGNTAVGMFTERDVVRAVAEHGA 69
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVR 186
+ +V+++++ + +L++ S I H LM HIRH+PVID +V +IS+ D+
Sbjct: 70 NAINVKVSQLVSVQ-QLVSCSSSDTIEHVRHLMNRNHIRHLPVIDDYSLVSVISMRDIAA 128
Query: 187 AVVEQQKG 194
AV E G
Sbjct: 129 AVDEALNG 136
>gi|297531207|ref|YP_003672482.1| hypothetical protein GC56T3_2965 [Geobacillus sp. C56-T3]
gi|448236783|ref|YP_007400841.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
gi|297254459|gb|ADI27905.1| CBS domain containing protein [Geobacillus sp. C56-T3]
gi|445205625|gb|AGE21090.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
Length = 148
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ TV++A + M+Q NIG+L V++ G+ + G+ T+RD ++ QG+ P +VAE+MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDV 184
N+++T + ++ A +M +R +P++ + ++ G++++ D+
Sbjct: 80 --NQVVTGTPNMSVQEAANVMAQHQVRRLPIVENNQLQGIVALGDI 123
>gi|357157411|ref|XP_003577789.1| PREDICTED: CBS domain-containing protein CBSCBSPB3-like
[Brachypodium distachyon]
Length = 556
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D V A + M + + S+V+ Q GIFT +D L ++V Q SP+ T V ++MT
Sbjct: 253 DPVYVAAQKMRELRVNSVVITNGNSLQ---GIFTSKDVLMRVVAQNLSPELTLVEKVMTA 309
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKG 194
TL D +IL A+ +M D H+PV+ DGR+V + ++ + A + +G
Sbjct: 310 HPDCATL--DTSILDALHIMHDGKFLHIPVVDGDGRVVACLDVLQLTHAAISMAEG 363
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A + MA + + VL ++GI T++D +++ +G ++T +++IMT
Sbjct: 85 TVSEACRRMAARRVDA--VLLTDANGLLSGIVTDKDVATRVIAEGLRVEHTIISKIMT-R 141
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
N L + SD + A+Q M RH+PV+ +G ++ M+ I
Sbjct: 142 NPLY-VSSDTLAIEALQKMVQGKFRHLPVVENGEVIAMLDI 181
>gi|358446979|ref|ZP_09157516.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
gi|356607076|emb|CCE55869.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
Length = 618
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
Query: 68 DDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR 127
D K+ C D ++ +A + M ++++ SL+V+ E + GI T+RD ++V QG
Sbjct: 156 DVKIAKPRSCPPDLSIREAAQRMEEYSVSSLLVI---EGDDLLGIITDRDMRGRVVAQGV 212
Query: 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVR 186
VA++MT + L+TL SD+ + A+ M+++ I H+PV+D G + G+++ D+ R
Sbjct: 213 DTARP-VADVMTKD--LLTLGSDSLAMEALMYMSERKIHHLPVVDKGTVTGIVTQNDIAR 269
>gi|392417205|ref|YP_006453810.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
gi|390616981|gb|AFM18131.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
Length = 151
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTER 116
+ +++VL KG + + +V + ++ HNIG++VV+ P Q GI +ER
Sbjct: 10 VRISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSPDGLQ---GIVSER 62
Query: 117 DYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RI 175
D +RK+ G V++IMT + T D ++ LMT +RHVPV+ G R+
Sbjct: 63 DVVRKLHEIGPDLLRRPVSDIMT--TLVATCSPDDSVDSLSALMTTNRVRHVPVVVGDRL 120
Query: 176 VGMISIVDVVRAVVEQQKGELKRLNEFI 203
G++SI DVV+ +E+ + E ++L +I
Sbjct: 121 AGIVSIGDVVKTRMEELEREQQQLQAYI 148
>gi|339021242|ref|ZP_08645349.1| putative cystathionine-beta-synthase [Acetobacter tropicalis NBRC
101654]
gi|338751637|dbj|GAA08653.1| putative cystathionine-beta-synthase [Acetobacter tropicalis NBRC
101654]
Length = 199
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L + DD V + +HNIG V+ G +AG+ +ER + + G +
Sbjct: 43 LTVKEDDPVLSVANLLIRHNIGGAPVM--GANGALAGMVSERAIVNALTQYGPNIASLTA 100
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQK 193
EIM E T D NI MT RHVPV+ DG++VG++SI D+V+ E +
Sbjct: 101 KEIMLKETP--TASPDDNIFDIANRMTWSRSRHVPVLEDGKLVGLVSIGDIVKLRAENAE 158
Query: 194 GELKRLNEFIRGEYY 208
E + L +++ G +
Sbjct: 159 QEAQELQDYVTGSNH 173
>gi|335440035|ref|ZP_08561758.1| putative signal transduction protein with CBS domains [Halorhabdus
tiamatea SARL4B]
gi|334889059|gb|EGM27352.1| putative signal transduction protein with CBS domains [Halorhabdus
tiamatea SARL4B]
Length = 129
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133
+ + D V D + M + ++GS VV+ GE GI T+RD ++V + R P T
Sbjct: 1 MVTAQPDTPVPDLAETMDEGDVGS-VVITDGETP--VGIVTDRDLAIRVVSEERDPTATT 57
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDVVRAVVEQQ 192
A++MT++ K T+ +DA A LM++ +R +PV D G + G+++ D+ + +++
Sbjct: 58 AADVMTEDLK--TIEADAGFYEATNLMSESSVRRLPVTDGGELAGIVTADDLTELIADEE 115
Query: 193 K 193
+
Sbjct: 116 Q 116
>gi|295696937|ref|YP_003590175.1| putative signal transduction protein with CBS domains [Kyrpidia
tusciae DSM 2912]
gi|295412539|gb|ADG07031.1| putative signal transduction protein with CBS domains [Kyrpidia
tusciae DSM 2912]
Length = 139
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T +DA + M N+GS+ V+ ++ + GI T+RD + K + G+ P T V + MT
Sbjct: 19 TCKDAARVMNDINVGSVPVV---DKDKLVGICTDRDIVLKCIAAGKDPATTAVKDCMT-A 74
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV-VRAVVEQQKGE 195
N + P D + A LM+ IR +PV+D G++VGM++I D+ V A+ + + GE
Sbjct: 75 NPITGTP-DMDAHQASDLMSQHQIRRLPVVDQGKLVGMVAIGDLAVTAIHQDEAGE 129
>gi|288939928|ref|YP_003442168.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
gi|288895300|gb|ADC61136.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
Length = 621
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 45 SSSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPG 104
+ SP+ GL + V +++ + + R + ++ DA + M++H++ SL+++
Sbjct: 142 TESPSSGTGLMTVQVRDMVQR-------APIATRPETSIRDAARIMSEHHVSSLLIM--- 191
Query: 105 EQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKH 164
+ +H+AG+ T+RD + V G + V IMT+ KL T+ D A+ MT +
Sbjct: 192 DGEHLAGMITDRDLRNRCVAAGLATDQP-VRAIMTE--KLTTVDMDTLGFQALIAMTRLN 248
Query: 165 IRHVPVI-DGRIVGMISIVDVVR 186
+ H+PV+ +GR+VG+IS D R
Sbjct: 249 VHHLPVVENGRVVGLISSTDFTR 271
>gi|398380002|ref|ZP_10538120.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. AP16]
gi|397721318|gb|EJK81866.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. AP16]
Length = 155
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115
++SV +L TKG + V + + TV +A + + ++ IG++VV+ G I+GIFTE
Sbjct: 13 SVSVKAILDTKGRNVVTT----GGNTTVAEAARMLNENRIGAIVVV--GMAGKISGIFTE 66
Query: 116 RDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR 174
RD + + G +A +MT K+ + M++MT + RHVPV D G+
Sbjct: 67 RDVVNAVAKHGGECLDQPIASLMT--AKVHRCKEETTTDELMEVMTLRRFRHVPVEDKGK 124
Query: 175 IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ G+ISI DVV+ + + + E +++ +I G
Sbjct: 125 LSGIISIGDVVKWRIREIELEAEQIKAYIAG 155
>gi|86743177|ref|YP_483577.1| signal-transduction protein [Frankia sp. CcI3]
gi|86570039|gb|ABD13848.1| putative signal-transduction protein with CBS domains [Frankia sp.
CcI3]
Length = 236
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV DA M + +G+L+V+ E + GI T+RD + + V +G P +R+ +MT E
Sbjct: 20 TVRDAAAQMERQGVGALLVM---ENDRLVGIVTDRDIVLRGVARG-IPTDSRIDALMTTE 75
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVV 185
+IT+PS ++ A ++ D IR +PV+DG R+VG++S+ D++
Sbjct: 76 --VITVPSGVDLERAYEIFRDHAIRRLPVVDGRRLVGLLSVDDLL 118
>gi|114766557|ref|ZP_01445514.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541247|gb|EAU44298.1| CBS domain protein [Roseovarius sp. HTCC2601]
Length = 173
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 14/156 (8%)
Query: 56 NISVAE-----VLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIA 110
N+S AE VL KGD+ V W+ + +T+ AV+ + IG+++V P Q +
Sbjct: 26 NLSAAEATVRHVLDDKGDEVV--WI--QPQETIGKAVEVLRDKRIGAILVKDP--QGALV 79
Query: 111 GIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV 170
GI +ERD +R++ RV E+MT E + T D +++ ++ M D RH+PV
Sbjct: 80 GILSERDIVRRLADTPGRTLPQRVEELMTPEVE--TCSPDESLVVVLRRMNDGRFRHMPV 137
Query: 171 I-DGRIVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205
+ +G +VG+ISI DVV + + E +L + I G
Sbjct: 138 MEEGTLVGLISIGDVVNYRLTALEYEALKLKQLIVG 173
>gi|414077146|ref|YP_006996464.1| CBS and CP12 domain-containing protein [Anabaena sp. 90]
gi|413970562|gb|AFW94651.1| CBS and CP12 domain-containing protein [Anabaena sp. 90]
Length = 204
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
++T D RS TV++AV M + +L+V + EQ GI TE D + K+
Sbjct: 1 MLTAADVMTKDVAMIRSSATVKEAVDLMKARDWRALIVDRRHEQDAY-GIITESDIVYKV 59
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGRIVGMISIV 182
+ + P RV EIMT I + + + + +L + H+R PVI G+++G+IS+
Sbjct: 60 ISYSKDPNKIRVYEIMT--KPCIVVNPELGLEYVARLFANHHLRRAPVISGKLLGIISLT 117
Query: 183 DVV--RAVVEQQKGEL 196
D++ + +EQ + L
Sbjct: 118 DILARSSCLEQPRSFL 133
>gi|359777616|ref|ZP_09280895.1| hypothetical protein ARGLB_075_00060 [Arthrobacter globiformis NBRC
12137]
gi|359305025|dbj|GAB14724.1| hypothetical protein ARGLB_075_00060 [Arthrobacter globiformis NBRC
12137]
Length = 145
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 76 CCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135
C + + ++ DA + M + GSL + G+ + G+ T+RD + K V GR P+
Sbjct: 14 CVKENQSLADAARMMLDLDCGSLPIC--GDDGKLTGMITDRDIVLKCVAAGRDPREMVAR 71
Query: 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVEQQKG 194
++ T I +DAN+ A+++M +R +PVI D ++VG+IS D+ R E++ G
Sbjct: 72 DLATGRPHWID--ADANVDAAIEMMERYQVRRLPVIADHKLVGIISQGDIARNYSEERVG 129
Query: 195 EL 196
EL
Sbjct: 130 EL 131
>gi|294675913|ref|YP_003576528.1| cyclic nucleotide-binding domain-/cystathionine beta-synthase
domain-/unknown function domain-containing protein
[Rhodobacter capsulatus SB 1003]
gi|294474733|gb|ADE84121.1| cyclic nucleotide-binding domain protein/cystathionine
beta-synthase domain protein/protein of unknown function
DUF294 domain protein [Rhodobacter capsulatus SB 1003]
Length = 608
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 12/116 (10%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L C + TV A + M ++ SL V+ PGE+ + GI T+RD K++ G P T V
Sbjct: 152 LACTPETTVLTAARMMRDAHVSSLGVVDPGER--LLGIVTQRDLSNKVLADGL-PTGTAV 208
Query: 135 AEIMTDENKLITLPSDA---NILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
A +MT ++LP A +ILH +M ++ I H+P+ DGR VGMI+ D+ R
Sbjct: 209 AAVMTAGP--VSLPPTALGSDILH---IMLERRIGHLPITEDGRFVGMITQTDLTR 259
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,109,738,668
Number of Sequences: 23463169
Number of extensions: 121963340
Number of successful extensions: 325292
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 7010
Number of HSP's that attempted gapping in prelim test: 317615
Number of HSP's gapped (non-prelim): 9861
length of query: 208
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 72
effective length of database: 9,168,204,383
effective search space: 660110715576
effective search space used: 660110715576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)