BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028491
(208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 214 bits (545), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 151/210 (71%), Gaps = 7/210 (3%)
Query: 1 MQGMIKGVRTCQEILKGAILEHHQGRYVVEGRKTCSRFGCVISSSSSPT--EEKGLENIS 58
MQG+I+ + ++KG++L+H + V+ S F C S S+ P EE G E+ +
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLR---VINPAIQPSVF-CSRSESTQPARMEESGFESTT 56
Query: 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY 118
+++V+ +KG GSWL C +DDTV DAVK+M QHN+G+LVV+KPGEQQ +AGI TERDY
Sbjct: 57 ISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDY 116
Query: 119 LRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVG 177
LRKI+ QGRS K T+V +IMT+ENKLIT+ + +L AMQLMTD IRH+PVI D ++G
Sbjct: 117 LRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIG 176
Query: 178 MISIVDVVRAVVEQQKGELKRLNEFIRGEY 207
M+SI DVVRAVV + + EL+RLN +I+G Y
Sbjct: 177 MVSIGDVVRAVVHEHREELQRLNAYIQGGY 206
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
++ VE A K M +H IGS+V++ E+ GI TERD + K+V QG++P +IM
Sbjct: 20 TETAVEIAYK-MREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIM 76
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
+ +IT+ D + A++LM DK IR +P++D G+++G++++ D+++
Sbjct: 77 S--QPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQV 125
>sp|Q58069|Y653_METJA Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0653 PE=4 SV=1
Length = 194
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ D M ++NIG++V++ E GI TERD ++++V + PK E+M+
Sbjct: 25 SIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEVMS-- 79
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVR 186
K+IT+P +A+I A ++M I+ +PV+ DG +VG+++ D+VR
Sbjct: 80 KKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG-RSPKYTRVAEIMTD 140
T+ +A K M +HN+GSLVV+ Q + GI TERD ++ + SP V + MT
Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERDIVKAASNRDIDSP----VEKYMTK 74
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVVEQQKGELKR 198
+ K +T D + A+ +M + RH+P+I +G++ G++SI D+ RA+++ + +
Sbjct: 75 DVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGK 132
Query: 199 LNEFIRG 205
E ++G
Sbjct: 133 PAEEVKG 139
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 20/129 (15%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D+T++ A+ M +H I L V+ E+ + GI T++D + +GR+ V
Sbjct: 104 ITIAPDETIDYALFLMEKHGIDGLPVV---EEDRVVGIITKKDIAAR---EGRT-----V 152
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVV-----RA 187
E+MT E +IT+P ++ A+++M + I +PV+ DG++VG+I++ D+V +
Sbjct: 153 KELMTRE--VITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLVARKKYKN 210
Query: 188 VVEQQKGEL 196
V +KGEL
Sbjct: 211 AVRNEKGEL 219
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 7/106 (6%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
+ T+++A M QHN+G++ V+ EQ + G+ T+RD + QGR + T V+E+M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID-GRIVGMISIVDV 184
E L++ + ++ A QLM IR +P++D +VG++++ D+
Sbjct: 74 TE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
>sp|Q9SJQ5|Y2650_ARATH CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana
GN=CBSCBSPB2 PE=2 SV=1
Length = 536
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV DA + MA + + VL ++GI T++D +++ +G P++T V+++MT
Sbjct: 78 TVFDACRRMAARRVDA--VLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRN 135
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
+T SD+ + A+Q M RH+PV+ +G ++ ++ I
Sbjct: 136 PIFVT--SDSLAIEALQKMVQGKFRHLPVVENGEVIALLDI 174
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138
+ D V A K M + S V++ G + H GI T +D L ++V Q SP+ T V ++M
Sbjct: 239 ASDPVFVASKKMRDLRVNS-VIIAVGNKIH--GILTSKDILMRVVAQNLSPELTLVEKVM 295
Query: 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVV 189
T + ++ + IL A+ +M D H+PV DG V + ++ + A +
Sbjct: 296 TPNPECASI--ETTILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAI 346
>sp|O06186|HRP1_MYCTU Hypoxic response protein 1 OS=Mycobacterium tuberculosis GN=hrp1
PE=1 SV=1
Length = 143
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 64 MTKGDDKVGSWLCCRSD-DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122
MT D + + + C + +T+ A + M +H+IG+L + G+ + G+ T+RD + K
Sbjct: 1 MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPIC--GDDDRLHGMLTDRDIVIKG 58
Query: 123 VGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISI 181
+ G P E+ D + + ++A+I + +M + +R VPVI + R+VG+++
Sbjct: 59 LAAGLDPNTATAGELARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTE 116
Query: 182 VDVVRAVVEQ 191
D+ R + E
Sbjct: 117 ADIARHLPEH 126
>sp|Q9LF97|Y3295_ARATH CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana
GN=CBSCBSPB3 PE=1 SV=1
Length = 556
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
D V A K M + S+++ I+GI T +D L ++V Q SP+ T V ++MT
Sbjct: 248 DPVSVAAKRMRDLRVNSVII---STGNKISGILTSKDILMRVVAQNLSPELTLVEKVMTP 304
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRA---VVEQQKGE 195
+ +L + IL A+ M D H+P+I DG + ++ + A +VE G
Sbjct: 305 NPECASL--ETTILDALHTMHDGKFLHLPIIDKDGSAAACVDVLQITHAAISMVENSSGA 362
Query: 196 LKRLNEFIRGEYY 208
+ + + +++
Sbjct: 363 VNDMANTMMQKFW 375
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV DA + MA + + ++ ++GI T++D +++ +G P T V+++MT
Sbjct: 80 TVFDACRRMAARRVDACLLTD--SSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRN 137
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIV 182
+T SD+ L A+Q M RH+PV+ +G ++ ++ I
Sbjct: 138 PIFVT--SDSLALEALQKMVQGKFRHLPVVENGEVIALLDIT 177
>sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain
VF5) GN=guaB PE=3 SV=1
Length = 490
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR- 133
+ + D V++A+ MA++ I + V+ E++ + GI T RD LR I + Y++
Sbjct: 101 VTVKPDTRVKEALDIMAKYKISGVPVVD--EERKLIGILTNRD-LRFI----KPEDYSKP 153
Query: 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVR 186
V+E MT EN LIT P + A ++ I +P++D G+I G+I+I D+V+
Sbjct: 154 VSEFMTKEN-LITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIVK 207
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 20/129 (15%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D+TV+ A+ M +H I L V+ E + + GI T++D + +G+ V
Sbjct: 104 ITIAPDETVDFALFLMEKHGIDGLPVV---EDEKVVGIITKKDIAAR---EGK-----LV 152
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV-----RA 187
E+MT E +IT+P + A+++M + I +PV+D G++VG+I++ D+V +
Sbjct: 153 KELMTKE--VITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKN 210
Query: 188 VVEQQKGEL 196
V + GEL
Sbjct: 211 AVRDENGEL 219
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 72/129 (55%), Gaps = 20/129 (15%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ ++TV+ A+ M +H+I L V+ E + + GI +++D + +G+ V
Sbjct: 104 ITISPEETVDFALFLMEKHDIDGLPVV---ENEKVVGIISKKDIAAR---EGK-----LV 152
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV-----RA 187
E+MT + +IT+P + + A+++M + I +PV+D GR++G+I++ D+V +
Sbjct: 153 KELMTKD--VITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLVARKKYKN 210
Query: 188 VVEQQKGEL 196
V + GEL
Sbjct: 211 AVRDENGEL 219
>sp|Q9FMV3|Y5349_ARATH CBS domain-containing protein CBSCBSPB1 OS=Arabidopsis thaliana
GN=CBSCBSPB1 PE=1 SV=1
Length = 543
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 70 KVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSP 129
++ L + T+ +A K MA + +L++ E + GI T++D +++ Q +
Sbjct: 59 RLSKALTVPATTTIYEACKRMASRRVDALLLTDSNEM--LCGILTDKDIATRVISQELNV 116
Query: 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIV 182
+ T V+++MT +N + L S+ + A+Q M RH+PV+ +G ++ ++ I
Sbjct: 117 EETPVSKVMT-KNPMFVL-SETLAVEALQKMVQGKFRHLPVVENGEVIALLDIA 168
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 81 DTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTD 140
DTV K M + VV+ + + GIFT +D L ++V + P T V +MT
Sbjct: 239 DTVLTVAKKMVEFQSSCAVVII---EDKLRGIFTSKDILMRVVAENLPPSETLVETVMT- 294
Query: 141 ENKLITLPSDANILHAMQLMTDKHIRHVPVID 172
+N T+ D I+ A+ +M + H+PV D
Sbjct: 295 QNPESTI-VDTPIVEALHIMHEGKFLHLPVTD 325
>sp|Q8NY70|IMDH_STAAW Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MW2) GN=guaB PE=3 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q6GC82|IMDH_STAAS Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MSSA476) GN=guaB PE=3 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q6GJQ7|IMDH_STAAR Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain MRSA252) GN=guaB PE=3 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|P99106|IMDH_STAAN Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain N315) GN=guaB PE=1 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|P65169|IMDH_STAAM Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=guaB PE=1 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q5HIQ7|IMDH_STAAC Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain COL) GN=guaB PE=3 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q2YVL6|IMDH_STAAB Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=guaB PE=3 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q2G0Y7|IMDH_STAA8 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain NCTC 8325) GN=guaB PE=3 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|Q2FJM6|IMDH_STAA3 Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus aureus
(strain USA300) GN=guaB PE=3 SV=1
Length = 488
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 71 VGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130
+ + +++V +A M ++ I + ++ E +++ GI T RD LR I
Sbjct: 96 ISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRD-LRFI-----EDF 149
Query: 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAV 188
++ ++MT EN LIT P + + A +++ I +P++ DGR+ G+I+I D+ + +
Sbjct: 150 SIKIVDVMTQEN-LITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVI 207
>sp|P0DH79|Y5064_ARATH CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana
GN=CBSCBSPB5 PE=2 SV=1
Length = 548
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D+TV M ++ + +V+ + + GI T +D L +++ Q + T V ++MT
Sbjct: 246 DETVLGVTMKMVEYQSSAAMVMV---ENKLVGILTSKDILMRVISQNLPQETTTVEKVMT 302
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVV 189
+ T+ D I+ A+ +M + H+PV+ DG +V +I ++ + A V
Sbjct: 303 PNPESATV--DMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 352
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L T+ +A + MA + +L++ + GI T+RD K++ + + + T V
Sbjct: 72 LTVPDSTTLFEACRRMAARRVDALLLTD--SNALLCGILTDRDIATKVIAKQLNLEETPV 129
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIV 182
+++MT +N + L SD + A+Q M RH+PV+ +G ++ ++ I
Sbjct: 130 SKVMT-KNPVFVL-SDTIAVEALQKMVQGKFRHLPVVENGEVIALLDIA 176
>sp|Q0WLC7|Y5053_ARATH CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis thaliana
GN=CBSCBSPB4 PE=2 SV=2
Length = 548
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D+TV M ++ + +V+ + + GI T +D L +++ Q + T V ++MT
Sbjct: 246 DETVLGVTMKMVEYQSSAAMVMV---ENKLVGILTSKDILMRVISQNLPQETTTVEKVMT 302
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVI--DGRIVGMISIVDVVRAVV 189
+ T+ D I+ A+ +M + H+PV+ DG +V +I ++ + A V
Sbjct: 303 PNPESATV--DMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 352
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
L T+ +A + MA + +L++ + GI T+RD K++ + + + T V
Sbjct: 72 LTVPDSTTLFEACRRMAARRVDALLLTD--SNALLCGILTDRDIATKVIAKQLNLEETPV 129
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIV 182
+++MT +N + L SD + A+Q M RH+PV+ +G ++ ++ I
Sbjct: 130 SKVMT-KNPVFVL-SDTIAVEALQKMVQGKFRHLPVVENGEVIALLDIA 176
>sp|Q8ZMJ9|GUTQ_SALTY Arabinose 5-phosphate isomerase GutQ OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=gutQ PE=3 SV=2
Length = 321
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 46 SSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE 105
S P G ++ LM +GD L +V DA+ +++ +G + V E
Sbjct: 185 SHPAGALGARLLNNVHHLMRQGDAIPQVMLAT----SVMDAMLELSRTGLGLVAVCD--E 238
Query: 106 QQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHI 165
Q + G+FT+ D R +VG G T V+E MT ITL + + + A +L+ + I
Sbjct: 239 QHVVKGVFTDGDLRRWLVGGG--ALTTPVSEAMTPNG--ITLQAQSRAIDAKELLMKRKI 294
Query: 166 RHVPVID--GRIVGMISIVDVVRA 187
PV+D G++ G I++ D +A
Sbjct: 295 TAAPVVDENGKLTGAINLQDFYQA 318
>sp|Q8Z4C7|GUTQ_SALTI Arabinose 5-phosphate isomerase GutQ OS=Salmonella typhi GN=gutQ
PE=3 SV=1
Length = 321
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 46 SSPTEEKGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE 105
S P G ++ LM +GD L +V DA+ +++ +G + V E
Sbjct: 185 SHPAGALGARLLNNVHHLMRQGDAIPQVMLAT----SVMDAMLELSRTGLGLVAVCD--E 238
Query: 106 QQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHI 165
Q + G+FT+ D R +VG G T V+E MT ITL + + + A +L+ + I
Sbjct: 239 QHVVKGVFTDGDLRRWLVGGGA--LTTPVSEAMTPNG--ITLQAQSRAIDAKELLMKRKI 294
Query: 166 RHVPVID--GRIVGMISIVDVVRA 187
PV+D G++ G I++ D +A
Sbjct: 295 TAAPVVDENGKLTGAINLQDFYQA 318
>sp|Q57647|Y188_METJA Uncharacterized protein MJ0188 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0188 PE=4 SV=1
Length = 265
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D+TV+D +K + + S V++ G+ + GI + D IVG+ + K V
Sbjct: 14 VTVSKDNTVKDVIKLLKETGHNSFPVVENGK---LIGIVSVHD----IVGKDDNEK---V 63
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAVVEQQ 192
+MT ++ DANI+ ++M +PV+D +VG+IS +DV+R+ +E
Sbjct: 64 ENVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGIISNMDVIRSQIE-- 121
Query: 193 KGELKRLNEFIR 204
K K+L I+
Sbjct: 122 KTTPKKLENIIK 133
>sp|Q8D1Q8|KDSD_YERPE Arabinose 5-phosphate isomerase KdsD OS=Yersinia pestis GN=kdsD
PE=3 SV=2
Length = 328
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D ++ DA+ + + ++G V+ + I GIFT+ D LR++ G ++A++MT
Sbjct: 222 DASLRDALLEITRKSLGLTVICD--DSMRIKGIFTDGD-LRRVFDMGIDLNNAKIADVMT 278
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
I +P + + A+ LM +HI + V DG +++G++ + D++RA V
Sbjct: 279 RGG--IRVPPNILAVDALNLMESRHITALLVADGDQLLGVVHMHDMLRAGV 327
>sp|Q8ZLS1|KDSD_SALTY Arabinose 5-phosphate isomerase KdsD OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=kdsD PE=3 SV=1
Length = 328
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ DA+ + + N+G V+ E I GIFT+ D LR++ G + +AE+MT
Sbjct: 224 TLRDALLEITRKNLGMTVICD--ESMKIDGIFTDGD-LRRVFDMGGDMRQLGIAEVMTPG 280
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
I + + A+ LM +HI V V DG +++G++ + D++RA V
Sbjct: 281 G--IRVRPGILAVDALNLMQSRHITSVLVADGDQLLGVLHMHDLLRAGV 327
>sp|Q8Z3G6|KDSD_SALTI Arabinose 5-phosphate isomerase KdsD OS=Salmonella typhi GN=kdsD
PE=3 SV=1
Length = 328
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
T+ DA+ + + N+G V+ E I GIFT+ D LR++ G + +AE+MT
Sbjct: 224 TLRDALLEITRKNLGMTVICD--ESMKIDGIFTDGD-LRRMFDMGGDMRQLGIAEVMTPG 280
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
I + + A+ LM +HI V V DG +++G++ + D++RA V
Sbjct: 281 G--IRVRPGILAVDALNLMQSRHITSVLVADGDQLLGVLHMHDLLRAGV 327
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
TV +A ++MA+ + +++V+ G ++G+FT D + +++ G P + V +MT
Sbjct: 275 TVAEATESMARSGVSAVLVMDNGA---VSGVFTAHDVVLRVLAAGLDPYRSSVIRVMTPH 331
Query: 142 N--KLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAV 188
L +L + A++ M + ++PV+D I+GM+S+ + A+
Sbjct: 332 PDCALASL----RVSTALERMIEGKFSNLPVVDESDAIIGMLSLFHLATAI 378
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 16/120 (13%)
Query: 100 VLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQL 159
VL + + +AGI T D + VG G + + T +A+IM+ IT SD A+ L
Sbjct: 97 VLVVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSPLCIT--SDTRFDDALLL 154
Query: 160 MTDKHIRHVPVI-----------DGRIVGMISIVDVVRAV---VEQQKGELKRLNEFIRG 205
M + RH+PV+ +G ++G+I++ +R + +Q+ ++L E + G
Sbjct: 155 MIEHKFRHLPVVSDGGPDGSAGDEGDVIGIINMRACLREPLNRIARQQEAAQKLVEALEG 214
>sp|P65167|IMDH_MYCTU Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium
tuberculosis GN=guaB PE=1 SV=1
Length = 529
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ CR D+T+ A+ I L V+ + + GI T RD +R V Q + +V
Sbjct: 134 VTCRPDNTLAQVDALCARFRISGLPVVD--DDGALVGIITNRD-MRFEVDQSK-----QV 185
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVR 186
AE+MT + LIT + A+ L+ I +PV+D GR+ G+I++ D V+
Sbjct: 186 AEVMT-KAPLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFVK 238
>sp|P65168|IMDH_MYCBO Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=guaB PE=3 SV=1
Length = 529
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ CR D+T+ A+ I L V+ + + GI T RD +R V Q + +V
Sbjct: 134 VTCRPDNTLAQVDALCARFRISGLPVVD--DDGALVGIITNRD-MRFEVDQSK-----QV 185
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVR 186
AE+MT + LIT + A+ L+ I +PV+D GR+ G+I++ D V+
Sbjct: 186 AEVMT-KAPLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFVK 238
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 64 MTKGDDKVGSWL--CCRSDDTVEDAVKNMAQHNIGSL-VVLKPGEQQHIAGIFTERDYLR 120
MTK D + + L C D+ E AVK M N+G++ VV + GE + GI T+RD +
Sbjct: 1 MTKIKDLMTADLQYCTVLDNVYEAAVK-MKDANVGAIPVVDEDGET--LVGIVTDRDLVL 57
Query: 121 KIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMI 179
+ + + P ++ + MT+ K +++ DA++ + LM +R +PV + ++ G++
Sbjct: 58 RGIAI-KKPNSQKITDAMTE--KPVSVEEDASVDEVLHLMASHQLRRIPVTKNKKLTGIV 114
Query: 180 SIVDV 184
++ D+
Sbjct: 115 TLGDL 119
>sp|Q57892|Y450_METJA Uncharacterized protein MJ0450 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0450 PE=4 SV=1
Length = 186
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134
+ D +V D K M + ++ ++V+ + T++D ++K++ + P +V
Sbjct: 15 IVVSGDVSVYDVAKLMVEQDVPCVLVVCERPNHESIEVATDKDIIKKVLIRKLPPDKVKV 74
Query: 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI-DGRIVGMISIVDVVRAVVE 190
+I + KL+T+P + I A+++M + ++ DG+IVG+I+ D+++ E
Sbjct: 75 EDISS--GKLVTIPPNTTIDEALEIMNKYKTNELFIVDDGKIVGVITEEDLIKIAPE 129
>sp|P17115|GUTQ_ECOLI Arabinose 5-phosphate isomerase GutQ OS=Escherichia coli (strain
K12) GN=gutQ PE=1 SV=3
Length = 321
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+ +++ +G + V QQ + G+FT+ D R +VG G T V E MT
Sbjct: 217 SVMDAMLELSRTGLGLVAVCD--AQQQVQGVFTDGDLRRWLVGGG--ALTTPVNEAMTVG 272
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
TL S + + A +++ + I PV+D G++ G I++ D +A
Sbjct: 273 GT--TLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQA 318
>sp|Q8X4S5|GUTQ_ECO57 Arabinose 5-phosphate isomerase GutQ OS=Escherichia coli O157:H7
GN=gutQ PE=3 SV=3
Length = 321
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+ +++ +G + V QQ + G+FT+ D R +VG G T V E MT
Sbjct: 217 SVMDAMLELSRTGLGLVAVCD--AQQQVQGVFTDGDLRRWLVGGG--ALTTPVNEAMTVG 272
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
TL S + + A +++ + I PV+D G++ G I++ D +A
Sbjct: 273 GT--TLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQA 318
>sp|Q83MK2|GUTQ_SHIFL Arabinose 5-phosphate isomerase GutQ OS=Shigella flexneri GN=gutQ
PE=3 SV=5
Length = 321
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+ +++ +G + V QQ + G+FT+ D R +VG G T V E MT
Sbjct: 217 SVMDAMLELSRTGLGLVAVCD--AQQQVQGVFTDGDLRRWLVGGG--ALTTPVNEAMTTG 272
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
TL + + + A +++ + I PV+D G++ G I++ D +A
Sbjct: 273 GT--TLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQA 318
>sp|Q57976|M556_METJA Methylated protein MJ0556 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0556 PE=1 SV=3
Length = 174
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 52 KGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAG 111
K L+ I V +V+++ G + + T+++ M +HNI + V+ ++ + G
Sbjct: 17 KELQKIRVKDVMIS------GDVIITTPEKTIKEIFDEMIKHNISGMPVV--DDRGVMIG 68
Query: 112 IFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLM--TDKHIRHVP 169
T LR+I S Y V E+M T +D +I+ A + M ++K + +P
Sbjct: 69 FIT----LREIRKYMTSHPYLNVGEVMLKNPPYTT--ADEDIITAFEKMIESNKKLDQLP 122
Query: 170 VID--------GRIVGMISIVDVVRAVVEQQKGELKRLNEF 202
VI+ G++ G+I + D+++ + E ELK L F
Sbjct: 123 VINTKYPEKILGKLEGIIFMEDIIKLLYENIIKELKTLVSF 163
>sp|Q9PJZ7|Y679_CHLMU Uncharacterized protein TC_0679 OS=Chlamydia muridarum (strain MoPn
/ Nigg) GN=TC_0679 PE=3 SV=1
Length = 328
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
C TV +A+ ++ + G + V+ EQ + GIFT+ D R + G + + +
Sbjct: 214 CSPSITVSEALTVLSSYGYGCVCVVN--EQFELLGIFTDGDLRRGLSECGGAILECPLEQ 271
Query: 137 IMTDENKLITLPSDANILHAMQLM-TDKHIRHVPVIDGR----IVGMISIVDVVRA 187
+MT + K+I+ D+++L +++M + + +PV+D + IVG++ + + RA
Sbjct: 272 VMTRKPKVIS--EDSDVLLGLEMMESGNPVTVLPVVDAQHQRFIVGLLHMHTLARA 325
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
+ D ++++A+ M G+ V+ E+ + GI T+ D LR+ V +G S + TR +
Sbjct: 212 VKEDTSMKEAIIEMTAKGFGATAVVN--EEGKLVGIITDGD-LRRFVNRGGSFENTRAKD 268
Query: 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
+MT K T+ D L A++ M D +I + V++ +G++ + D+++A
Sbjct: 269 VMTKNPK--TIKPDELALKALRKMEDHNITVLIVVNEENEPIGILHMHDILKA 319
>sp|Q9HLK8|IMDH_THEAC Inosine-5'-monophosphate dehydrogenase OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=guaB PE=3 SV=1
Length = 485
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 14/105 (13%)
Query: 83 VEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDEN 142
+E A MA NI L V+K + GI T+RD + V +G S V+++M +
Sbjct: 110 IEVARTLMATRNIAGLPVVK---DDKLVGIVTKRDL--EFVKKGSS-----VSDVMVRD- 158
Query: 143 KLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVV 185
+IT P + +I A++++ I +P++D G +VG+I+ D++
Sbjct: 159 -VITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDII 202
>sp|Q8FD73|KDSD_ECOL6 Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=kdsD PE=3 SV=2
Length = 328
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ DA+ + + N+G V+ + I GIFT+ D LR++ G + +A++MT
Sbjct: 224 SLRDALLEVTRKNLGMTVICD--DNMMIEGIFTDGD-LRRVFDMGVDVRRLSIADVMTPG 280
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
I + + A+ LM +HI V V DG ++G++ + D++RA V
Sbjct: 281 G--IRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGV 327
>sp|Q8X9J0|KDSD_ECO57 Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli O157:H7
GN=kdsD PE=3 SV=1
Length = 328
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ DA+ + + N+G V+ + I GIFT+ D LR++ G + +A++MT
Sbjct: 224 SLRDALLEVTRKNLGMTVICD--DNMMIEGIFTDGD-LRRVFDMGVDVRQLSIADVMTPG 280
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
I + + A+ LM +HI V V DG ++G++ + D++RA V
Sbjct: 281 G--IRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGV 327
>sp|P45395|KDSD_ECOLI Arabinose 5-phosphate isomerase KdsD OS=Escherichia coli (strain
K12) GN=kdsD PE=1 SV=1
Length = 328
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ DA+ + + N+G V+ + I GIFT+ D LR++ G + +A++MT
Sbjct: 224 SLRDALLEVTRKNLGMTVICD--DNMMIEGIFTDGD-LRRVFDMGVDVRQLSIADVMTPG 280
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
I + + A+ LM +HI V V DG ++G++ + D++RA V
Sbjct: 281 G--IRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGV 327
>sp|Q9KGN8|IMDH_BACHD Inosine-5'-monophosphate dehydrogenase OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=guaB PE=3 SV=1
Length = 485
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 80 DDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139
D V DA M ++ I + ++ E Q + GI T RD LR I T + ++MT
Sbjct: 105 DRQVFDAEHLMGKYRISGVPIVD--EDQKLVGILTNRD-LRFI-----EDYSTLIDDVMT 156
Query: 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRAV 188
EN L+T P + A +++ I +P++D G + G+I+I D+ + +
Sbjct: 157 KEN-LVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDIEKVI 206
>sp|Q83JF4|KDSD_SHIFL Arabinose 5-phosphate isomerase KdsD OS=Shigella flexneri GN=kdsD
PE=3 SV=2
Length = 328
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
++ DA+ + + N+G V+ + I GIFT+ D LR++ G + +A++MT
Sbjct: 224 SLRDALLEVTRKNLGMTVICD--DNMMIEGIFTDGD-LRRVFDMGVDVRQLSIADVMTPG 280
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-RIVGMISIVDVVRAVV 189
I + + A+ LM +HI V V DG ++G++ + D++RA V
Sbjct: 281 G--IRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGV 327
>sp|Q8FEN7|GUTQ_ECOL6 Arabinose 5-phosphate isomerase GutQ OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=gutQ PE=3 SV=1
Length = 321
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDE 141
+V DA+ +++ +G + V +Q+ + G+FT+ D R +VG G T V E MT
Sbjct: 217 SVMDAMLELSRTGLGLVAVCD--DQRLVKGVFTDGDLRRWLVGGG--ALTTPVNEAMTVG 272
Query: 142 NKLITLPSDANILHAMQLMTDKHIRHVPVID--GRIVGMISIVDVVRA 187
TL S + + A +++ + I PV+D G++ G I++ D +A
Sbjct: 273 GT--TLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQA 318
>sp|O84404|Y399_CHLTR Uncharacterized protein CT_399 OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=CT_399 PE=3 SV=1
Length = 328
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 77 CRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136
C TV +++ ++ + G + V+ E + GIFT+ D R + G + +
Sbjct: 214 CSPLTTVAESLPTLSSYGYGCVCVVN--ELFELLGIFTDGDLRRGLSEYGGDILAYPLQQ 271
Query: 137 IMTDENKLITLPSDANILHAMQLM-TDKHIRHVPVIDGR----IVGMISIVDVVRA 187
IMT K+I+ D+++L ++++M + + +PV+D + IVG++ + + RA
Sbjct: 272 IMTRNPKVIS--EDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARA 325
>sp|Q5SMG8|MGTE_THET8 Magnesium transporter MgtE OS=Thermus thermophilus (strain HB8 /
ATCC 27634 / DSM 579) GN=TTHA1060 PE=1 SV=1
Length = 450
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 105 EQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKH 164
E+ + G+ + RD IV R TRVAEIM K++ + +D + +LM D
Sbjct: 176 EKGRLKGVLSLRDL---IVADPR----TRVAEIMN--PKVVYVRTDTDQEEVARLMADYD 226
Query: 165 IRHVPVID--GRIVGMISIVDVVRAVVEQQKGE 195
+PV+D GR+VG++++ DV+ V+E + E
Sbjct: 227 FTVLPVVDEEGRLVGIVTVDDVLD-VLEAEATE 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,756,780
Number of Sequences: 539616
Number of extensions: 3042373
Number of successful extensions: 8036
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 7969
Number of HSP's gapped (non-prelim): 133
length of query: 208
length of database: 191,569,459
effective HSP length: 112
effective length of query: 96
effective length of database: 131,132,467
effective search space: 12588716832
effective search space used: 12588716832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)