Query 028491
Match_columns 208
No_of_seqs 171 out of 1908
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 20:32:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028491.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028491hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fhm_A Uncharacterized protein 99.9 7.2E-24 2.5E-28 158.5 12.3 144 53-204 20-164 (165)
2 4esy_A CBS domain containing m 99.9 1.4E-24 4.8E-29 163.2 6.1 127 54-191 15-163 (170)
3 3lv9_A Putative transporter; C 99.9 2E-22 6.7E-27 147.9 14.7 123 54-192 20-147 (148)
4 3lhh_A CBS domain protein; str 99.9 4.3E-22 1.5E-26 150.0 13.6 128 54-195 39-169 (172)
5 3i8n_A Uncharacterized protein 99.9 3.3E-22 1.1E-26 143.7 11.6 124 54-190 3-129 (130)
6 4fry_A Putative signal-transdu 99.9 2.2E-22 7.6E-27 148.9 10.9 143 57-205 7-150 (157)
7 3oco_A Hemolysin-like protein 99.9 4.6E-22 1.6E-26 146.9 12.2 129 54-196 17-149 (153)
8 2rc3_A CBS domain; in SITU pro 99.9 7.8E-22 2.7E-26 142.3 13.1 122 58-191 7-132 (135)
9 1y5h_A Hypothetical protein RV 99.9 2.5E-22 8.4E-27 144.5 10.3 126 54-190 5-131 (133)
10 3hf7_A Uncharacterized CBS-dom 99.9 9.7E-22 3.3E-26 141.4 13.3 124 57-191 2-128 (130)
11 3k6e_A CBS domain protein; str 99.9 4.6E-22 1.6E-26 147.8 11.6 127 56-193 14-145 (156)
12 3lfr_A Putative metal ION tran 99.9 1.8E-22 6E-27 146.3 9.1 128 56-195 2-132 (136)
13 3kpb_A Uncharacterized protein 99.9 1.5E-21 5.1E-26 138.3 13.3 118 57-190 1-120 (122)
14 2o16_A Acetoin utilization pro 99.9 2.3E-21 7.8E-26 144.2 14.8 126 56-192 4-137 (160)
15 2ef7_A Hypothetical protein ST 99.9 2E-21 7E-26 139.7 14.1 125 55-193 2-128 (133)
16 1pbj_A Hypothetical protein; s 99.9 1.8E-21 6.3E-26 138.2 13.3 121 57-190 1-122 (125)
17 3jtf_A Magnesium and cobalt ef 99.9 1.2E-21 4.2E-26 140.5 12.1 123 55-192 3-128 (129)
18 2yzi_A Hypothetical protein PH 99.9 2.8E-21 9.5E-26 139.8 13.5 127 54-193 4-132 (138)
19 3nqr_A Magnesium and cobalt ef 99.9 7.5E-22 2.6E-26 141.2 10.3 122 56-190 2-126 (127)
20 3k2v_A Putative D-arabinose 5- 99.9 1.7E-21 5.9E-26 143.1 12.2 118 57-186 28-148 (149)
21 3lqn_A CBS domain protein; csg 99.9 2.7E-21 9.2E-26 141.9 12.6 131 53-194 11-147 (150)
22 2p9m_A Hypothetical protein MJ 99.9 3.9E-21 1.3E-25 139.0 12.8 124 54-190 5-136 (138)
23 3gby_A Uncharacterized protein 99.9 8.8E-22 3E-26 141.0 8.9 122 55-190 3-126 (128)
24 3kxr_A Magnesium transporter, 99.9 4.4E-21 1.5E-25 148.7 13.2 128 54-199 51-183 (205)
25 2rih_A Conserved protein with 99.9 8.5E-21 2.9E-25 137.9 13.9 121 56-190 4-128 (141)
26 4gqw_A CBS domain-containing p 99.9 3.1E-21 1E-25 141.4 10.6 130 55-193 3-146 (152)
27 2pfi_A Chloride channel protei 99.8 2.3E-20 7.8E-25 138.6 14.5 128 54-192 10-149 (164)
28 3sl7_A CBS domain-containing p 99.8 6.6E-21 2.3E-25 143.6 11.5 127 56-193 3-159 (180)
29 2nyc_A Nuclear protein SNF4; b 99.8 2.8E-20 9.7E-25 135.1 14.1 129 54-191 5-142 (144)
30 3fv6_A YQZB protein; CBS domai 99.8 2E-20 6.9E-25 138.9 13.2 130 53-193 13-147 (159)
31 1pvm_A Conserved hypothetical 99.8 1.6E-20 5.4E-25 142.7 12.9 124 56-190 8-133 (184)
32 1yav_A Hypothetical protein BS 99.8 2E-20 6.8E-25 138.7 12.8 129 54-195 11-147 (159)
33 2j9l_A Chloride channel protei 99.8 3.5E-20 1.2E-24 140.3 13.9 137 53-194 7-169 (185)
34 2uv4_A 5'-AMP-activated protei 99.8 2.2E-20 7.5E-25 137.6 12.0 125 53-190 19-151 (152)
35 3ocm_A Putative membrane prote 99.8 1.1E-20 3.9E-25 142.5 10.5 127 54-195 33-162 (173)
36 3ctu_A CBS domain protein; str 99.8 2.2E-20 7.6E-25 137.9 10.9 130 54-194 12-146 (156)
37 1o50_A CBS domain-containing p 99.8 6.6E-20 2.3E-24 135.7 13.4 127 52-191 11-154 (157)
38 2emq_A Hypothetical conserved 99.8 3.2E-20 1.1E-24 137.1 11.2 127 54-193 8-142 (157)
39 3oi8_A Uncharacterized protein 99.8 8.2E-21 2.8E-25 140.7 7.7 118 54-185 35-155 (156)
40 2oux_A Magnesium transporter; 99.8 5.8E-20 2E-24 149.2 12.9 131 54-202 134-271 (286)
41 2yvy_A MGTE, Mg2+ transporter 99.8 2.3E-19 7.9E-24 145.0 12.4 131 54-202 132-269 (278)
42 3l2b_A Probable manganase-depe 99.8 3.5E-19 1.2E-23 141.1 11.8 123 56-189 6-243 (245)
43 2d4z_A Chloride channel protei 99.8 2.8E-19 9.4E-24 142.3 11.0 129 54-191 10-247 (250)
44 3t4n_C Nuclear protein SNF4; C 99.8 6E-19 2.1E-23 144.8 13.0 128 55-191 185-321 (323)
45 1vr9_A CBS domain protein/ACT 99.8 5.6E-19 1.9E-23 137.4 11.9 119 56-192 12-132 (213)
46 3pc3_A CG1753, isoform A; CBS, 99.8 3E-19 1E-23 156.3 10.0 126 53-192 380-513 (527)
47 3ddj_A CBS domain-containing p 99.8 1.6E-18 5.5E-23 140.6 12.9 130 55-195 154-290 (296)
48 3kh5_A Protein MJ1225; AMPK, A 99.8 3.1E-18 1.1E-22 137.3 13.5 122 56-190 83-205 (280)
49 3ddj_A CBS domain-containing p 99.8 3.7E-18 1.3E-22 138.5 11.8 122 56-191 92-215 (296)
50 2zy9_A Mg2+ transporter MGTE; 99.8 7.4E-18 2.5E-22 145.5 13.9 127 54-198 152-285 (473)
51 2qrd_G Protein C1556.08C; AMPK 99.7 1.1E-17 3.7E-22 137.9 13.1 129 56-193 181-318 (334)
52 2yzq_A Putative uncharacterize 99.7 4.2E-18 1.4E-22 136.9 8.7 124 56-190 125-279 (282)
53 3org_A CMCLC; transporter, tra 99.7 1.2E-18 4.2E-23 155.3 3.7 126 55-191 451-626 (632)
54 2yzq_A Putative uncharacterize 99.7 3.9E-18 1.3E-22 137.1 5.1 116 57-190 1-119 (282)
55 3kh5_A Protein MJ1225; AMPK, A 99.7 4.4E-17 1.5E-21 130.6 11.2 114 74-191 14-143 (280)
56 2v8q_E 5'-AMP-activated protei 99.7 8.3E-17 2.8E-21 132.4 11.7 115 74-192 203-325 (330)
57 3t4n_C Nuclear protein SNF4; C 99.7 1E-16 3.5E-21 131.5 9.8 128 74-205 124-264 (323)
58 2v8q_E 5'-AMP-activated protei 99.6 9.7E-16 3.3E-20 126.0 11.9 128 53-191 31-178 (330)
59 3usb_A Inosine-5'-monophosphat 99.6 7.7E-16 2.6E-20 133.9 11.3 122 59-190 109-234 (511)
60 4fxs_A Inosine-5'-monophosphat 99.6 2E-16 6.9E-21 137.1 3.8 116 59-189 91-208 (496)
61 1zfj_A Inosine monophosphate d 99.6 1.3E-14 4.4E-19 125.9 12.6 117 58-190 91-211 (491)
62 2qrd_G Protein C1556.08C; AMPK 99.6 8E-15 2.7E-19 120.7 10.5 126 75-204 120-258 (334)
63 4avf_A Inosine-5'-monophosphat 99.6 1.5E-16 5.3E-21 137.7 -1.2 116 58-189 89-206 (490)
64 1me8_A Inosine-5'-monophosphat 99.6 2.6E-16 8.9E-21 136.8 0.0 115 63-191 103-222 (503)
65 1vrd_A Inosine-5'-monophosphat 99.5 3.3E-16 1.1E-20 136.0 -0.4 119 58-191 96-216 (494)
66 4af0_A Inosine-5'-monophosphat 99.5 7.4E-16 2.5E-20 132.0 -0.5 107 74-189 148-257 (556)
67 3ghd_A A cystathionine beta-sy 99.5 3.3E-14 1.1E-18 91.0 6.1 69 74-147 2-70 (70)
68 2cu0_A Inosine-5'-monophosphat 99.4 1.4E-14 4.8E-19 125.5 -0.8 110 60-189 96-207 (486)
69 1jcn_A Inosine monophosphate d 99.4 4.7E-15 1.6E-19 129.3 -6.3 119 58-189 109-232 (514)
70 3fio_A A cystathionine beta-sy 99.3 8.8E-12 3E-16 79.1 6.1 68 74-146 2-69 (70)
71 1vr9_A CBS domain protein/ACT 99.1 1.5E-10 5.1E-15 89.6 5.8 101 56-172 71-171 (213)
72 3ghd_A A cystathionine beta-sy 98.9 2.5E-09 8.5E-14 68.1 6.9 62 144-205 2-65 (70)
73 3hf7_A Uncharacterized CBS-dom 98.9 1.5E-09 5E-14 77.3 6.0 74 132-205 2-78 (130)
74 3lv9_A Putative transporter; C 98.9 3.2E-09 1.1E-13 77.0 7.6 64 128-191 19-85 (148)
75 3fio_A A cystathionine beta-sy 98.9 1.5E-09 5.2E-14 68.6 4.6 64 143-206 1-66 (70)
76 4esy_A CBS domain containing m 98.8 2.8E-09 9.4E-14 79.3 4.6 57 131-189 17-75 (170)
77 3k6e_A CBS domain protein; str 98.8 1E-08 3.6E-13 75.3 7.0 61 131-191 14-76 (156)
78 1pbj_A Hypothetical protein; s 98.8 6.6E-09 2.3E-13 72.7 5.3 70 133-204 2-72 (125)
79 3i8n_A Uncharacterized protein 98.8 2E-08 6.9E-13 71.1 7.2 58 56-123 71-128 (130)
80 3nqr_A Magnesium and cobalt ef 98.7 2E-08 6.9E-13 70.8 6.7 59 55-123 67-125 (127)
81 4fry_A Putative signal-transdu 98.7 2.7E-08 9.2E-13 72.6 7.6 75 55-140 76-150 (157)
82 4gqw_A CBS domain-containing p 98.7 2.3E-08 8E-13 72.2 7.2 60 56-124 84-143 (152)
83 3lhh_A CBS domain protein; str 98.7 1.7E-08 5.9E-13 75.1 6.6 63 129-191 39-104 (172)
84 3oco_A Hemolysin-like protein 98.7 2.6E-08 8.8E-13 72.6 7.3 59 56-124 85-143 (153)
85 3oi8_A Uncharacterized protein 98.7 1E-09 3.4E-14 80.6 -0.4 73 130-205 36-111 (156)
86 3kpb_A Uncharacterized protein 98.7 1.6E-08 5.6E-13 70.5 5.8 57 57-122 62-118 (122)
87 3sl7_A CBS domain-containing p 98.7 2.5E-08 8.5E-13 74.2 6.9 61 55-124 96-156 (180)
88 3ocm_A Putative membrane prote 98.7 1.5E-08 5E-13 75.8 5.4 79 109-191 15-98 (173)
89 3jtf_A Magnesium and cobalt ef 98.7 3.9E-08 1.3E-12 69.5 7.3 59 56-124 68-126 (129)
90 2nyc_A Nuclear protein SNF4; b 98.7 4.4E-08 1.5E-12 70.1 7.4 66 56-124 76-141 (144)
91 3k2v_A Putative D-arabinose 5- 98.7 1.4E-08 4.8E-13 73.7 4.4 74 131-204 27-102 (149)
92 2p9m_A Hypothetical protein MJ 98.7 4.6E-08 1.6E-12 69.6 6.9 60 55-123 71-135 (138)
93 3gby_A Uncharacterized protein 98.7 1.9E-08 6.3E-13 71.0 4.8 58 57-123 68-125 (128)
94 2ef7_A Hypothetical protein ST 98.7 4E-08 1.4E-12 69.6 6.5 60 56-124 66-125 (133)
95 2rc3_A CBS domain; in SITU pro 98.7 3.5E-08 1.2E-12 70.1 6.2 60 54-123 71-130 (135)
96 3kxr_A Magnesium transporter, 98.7 3.9E-08 1.3E-12 75.5 6.7 61 56-125 115-175 (205)
97 2yzi_A Hypothetical protein PH 98.7 2.1E-08 7.3E-13 71.5 4.9 57 130-188 5-63 (138)
98 3ctu_A CBS domain protein; str 98.7 2E-08 7E-13 73.2 4.8 61 131-191 14-76 (156)
99 3fhm_A Uncharacterized protein 98.7 2.6E-08 9E-13 73.5 5.2 61 54-124 90-150 (165)
100 3l2b_A Probable manganase-depe 98.6 6.5E-08 2.2E-12 76.0 7.5 60 130-191 5-66 (245)
101 2o16_A Acetoin utilization pro 98.6 9E-08 3.1E-12 70.2 7.7 59 55-123 76-134 (160)
102 2d4z_A Chloride channel protei 98.6 7.3E-08 2.5E-12 76.3 7.6 61 129-191 10-74 (250)
103 3lfr_A Putative metal ION tran 98.6 3.6E-08 1.2E-12 70.4 5.0 59 55-123 68-126 (136)
104 3lqn_A CBS domain protein; csg 98.6 8.1E-08 2.8E-12 69.4 6.9 61 54-125 84-144 (150)
105 1o50_A CBS domain-containing p 98.6 9.1E-08 3.1E-12 69.9 7.1 63 125-189 9-73 (157)
106 3fv6_A YQZB protein; CBS domai 98.6 5.3E-08 1.8E-12 71.4 5.8 62 54-124 78-144 (159)
107 1y5h_A Hypothetical protein RV 98.6 3.7E-08 1.3E-12 69.8 4.6 57 55-121 72-128 (133)
108 2uv4_A 5'-AMP-activated protei 98.6 1E-07 3.6E-12 69.2 7.0 58 56-122 86-149 (152)
109 2rih_A Conserved protein with 98.6 6.5E-08 2.2E-12 69.3 5.6 56 56-121 70-125 (141)
110 2emq_A Hypothetical conserved 98.5 1.7E-07 5.9E-12 68.2 6.9 61 54-125 80-140 (157)
111 2pfi_A Chloride channel protei 98.5 2.1E-07 7.3E-12 68.0 7.3 59 130-190 11-73 (164)
112 3usb_A Inosine-5'-monophosphat 98.5 6.6E-07 2.3E-11 77.8 11.4 101 56-171 174-275 (511)
113 2j9l_A Chloride channel protei 98.5 1.5E-07 5.2E-12 70.3 6.0 62 54-125 105-166 (185)
114 1pvm_A Conserved hypothetical 98.5 1.1E-07 3.8E-12 71.4 4.8 59 54-121 72-130 (184)
115 2oux_A Magnesium transporter; 98.5 2.5E-07 8.7E-12 74.6 6.9 61 55-124 199-259 (286)
116 1yav_A Hypothetical protein BS 98.5 2.8E-07 9.5E-12 67.4 6.5 60 54-124 83-142 (159)
117 3pc3_A CG1753, isoform A; CBS, 98.5 1E-07 3.6E-12 83.2 4.4 73 131-205 383-459 (527)
118 2yvy_A MGTE, Mg2+ transporter 98.4 2.1E-07 7E-12 74.7 5.1 59 56-123 198-256 (278)
119 1me8_A Inosine-5'-monophosphat 98.4 8.6E-08 2.9E-12 83.2 2.7 108 56-177 160-269 (503)
120 2zy9_A Mg2+ transporter MGTE; 98.3 1.3E-06 4.5E-11 75.2 6.5 60 55-123 217-276 (473)
121 1zfj_A Inosine monophosphate d 98.0 3.4E-05 1.2E-09 66.6 10.3 59 56-123 151-210 (491)
122 1vrd_A Inosine-5'-monophosphat 98.0 7.4E-06 2.5E-10 70.9 5.2 58 56-122 154-213 (494)
123 3org_A CMCLC; transporter, tra 97.9 5E-06 1.7E-10 74.1 3.7 54 58-121 569-622 (632)
124 4avf_A Inosine-5'-monophosphat 97.9 1E-05 3.5E-10 70.0 5.2 58 56-122 146-205 (490)
125 2cu0_A Inosine-5'-monophosphat 97.9 1E-05 3.6E-10 69.8 4.9 99 56-172 149-247 (486)
126 4af0_A Inosine-5'-monophosphat 97.8 1.4E-05 4.8E-10 68.9 4.0 57 56-121 199-255 (556)
127 4fxs_A Inosine-5'-monophosphat 97.8 1.5E-05 5.3E-10 68.9 3.8 59 56-121 148-206 (496)
128 1jcn_A Inosine monophosphate d 97.5 1E-05 3.4E-10 70.4 -1.3 58 55-121 171-230 (514)
129 1tif_A IF3-N, translation init 42.7 60 0.002 20.2 5.4 26 95-122 13-38 (78)
130 3k2t_A LMO2511 protein; lister 42.2 30 0.001 20.1 3.3 24 78-101 10-33 (57)
131 1svj_A Potassium-transporting 37.7 21 0.00072 25.4 2.6 33 82-117 120-152 (156)
132 3ka5_A Ribosome-associated pro 37.3 39 0.0013 20.3 3.3 35 79-115 11-45 (65)
133 2d7c_C RAB11 family-interactin 36.9 38 0.0013 18.4 2.9 25 180-205 2-26 (42)
134 3lyv_A Ribosome-associated fac 30.7 40 0.0014 20.3 2.6 35 79-115 12-46 (66)
135 1svj_A Potassium-transporting 27.5 19 0.00064 25.7 0.9 33 153-185 121-154 (156)
136 1r7h_A NRDH-redoxin; thioredox 20.8 89 0.003 17.8 3.0 32 87-120 40-71 (75)
137 2hv8_D RAB11 family-interactin 20.7 96 0.0033 18.5 2.9 26 179-205 23-48 (64)
138 1p0z_A Sensor kinase CITA; tra 20.4 67 0.0023 21.4 2.6 18 97-116 105-122 (131)
139 3by8_A Sensor protein DCUS; hi 20.2 67 0.0023 21.8 2.6 19 97-117 110-128 (142)
No 1
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=7.2e-24 Score=158.49 Aligned_cols=144 Identities=29% Similarity=0.470 Sum_probs=117.1
Q ss_pred CcccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 53 ~~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
.+..++|+++|.+... +++++.+++|+.+|++.|.+++++++||+ |++++++|+||.+||++++..........
T Consensus 20 ~l~~~~v~dim~~~~~----~~~~v~~~~~l~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGR----DVVTVGPDVSIGEAAGTLHAHKIGAVVVT--DADGVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp SSSSCBHHHHHHHHCS----CCCEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhhcCHHHHhccCCC----CCeEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCeEEEEEEHHHHHHHHHhcCCccccC
Confidence 3668999999997200 18899999999999999999999999999 78899999999999998776653234578
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHhhHHHHHHHHHhhh
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~~~~~~~~~~~~~~ 204 (208)
+++++|.+ +++++++++++.+|++.|.+++++++||+|++ ++|+||..|+++++.+........+++++.
T Consensus 94 ~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~~~~~~~~~~~~l~~~i~ 164 (165)
T 3fhm_A 94 SVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGEIEAEAEHIKAYIA 164 (165)
T ss_dssp BGGGTSBS--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHTTCC-------------
T ss_pred CHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998 89999999999999999999999999999999 999999999999999888887788887764
No 2
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.90 E-value=1.4e-24 Score=163.20 Aligned_cols=127 Identities=23% Similarity=0.451 Sum_probs=111.6
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcC-------
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG------- 126 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~------- 126 (208)
+..++|+++|+++ ++++++++|+.+|++.|.+++++++||+ |++|+++|+||.+||++++....
T Consensus 15 l~~~~V~diM~~~-------v~~v~~~~tl~~a~~~m~~~~~~~~pVv--d~~g~lvGiit~~Dll~~~~~~~~~~~~~~ 85 (170)
T 4esy_A 15 IRQVPIRDILTSP-------VVTVREDDTLDAVAKTMLEHQIGCAPVV--DQNGHLVGIITESDFLRGSIPFWIYEASEI 85 (170)
T ss_dssp HHTSBGGGGCCSC-------CCCEETTSBHHHHHHHHHHTTCSEEEEE--CTTSCEEEEEEGGGGGGGTCCTTHHHHHHH
T ss_pred HcCCCHHHhcCCC-------CcEECCcCcHHHHHHHHHHcCCeEEEEE--cCCccEEEEEEHHHHHHHHhhccccchhhh
Confidence 5578999999998 9999999999999999999999999999 88999999999999875421110
Q ss_pred --------------CCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHh
Q 028491 127 --------------RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 127 --------------~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~ 191 (208)
......+++++|++ +++++++++++.+|++.|.+++++++||+|++ ++|+||.+||++++..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 86 LSRAIPAPEVEHLFETGRKLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp HTTTSCHHHHHHHHHHHTTCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHTTTSCCC
T ss_pred hhhccchhhHHhhhccccccchhhhccc--CcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHHHHHHhc
Confidence 00124689999998 89999999999999999999999999999988 99999999999988654
No 3
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.89 E-value=2e-22 Score=147.90 Aligned_cols=123 Identities=17% Similarity=0.365 Sum_probs=111.6
Q ss_pred cccccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCC
Q 028491 54 LENISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPK 130 (208)
Q Consensus 54 ~~~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~ 130 (208)
+...+|+++|++ + ++++++++|+.+|++.|.+++++++||+ |++ ++++|+||.+||++.+....
T Consensus 20 l~~~~v~diM~~~~~-------~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~~~---- 86 (148)
T 3lv9_A 20 FEEKKIREIMVPRTD-------MVCIYESDSEEKILAILKEEGVTRYPVC--RKNKDDILGFVHIRDLYNQKINEN---- 86 (148)
T ss_dssp GGTCBGGGTSEETTT-------CCCEETTCCHHHHHHHHHHSCCSEEEEE--SSSTTSEEEEEEHHHHHHHHHHHS----
T ss_pred cCCCCHHHccccHHH-------eEEECCCCCHHHHHHHHHHCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHhcCC----
Confidence 668899999999 6 8999999999999999999999999999 676 89999999999988765432
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhh
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQ 192 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~ 192 (208)
..+++++| + +++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.++.
T Consensus 87 ~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~i 147 (148)
T 3lv9_A 87 KIELEEIL-R--DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI 147 (148)
T ss_dssp CCCGGGTC-B--CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHTC
T ss_pred CccHHHhc-C--CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCcC
Confidence 57899999 6 7899999999999999999999999999997 5 999999999999997653
No 4
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.88 E-value=4.3e-22 Score=149.98 Aligned_cols=128 Identities=12% Similarity=0.271 Sum_probs=109.3
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
+...+|+++|++..+ ++++++++|+.+|++.|.+++++++||+ +++ ++++|+|+.+||++++... ...
T Consensus 39 l~~~~v~diM~~~~~-----~~~v~~~~~v~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~~----~~~ 107 (172)
T 3lhh_A 39 LDERTISSLMVPRSD-----IVFLDLNLPLDANLRTVMQSPHSRFPVC--RNNVDDMVGIISAKQLLSESIAG----ERL 107 (172)
T ss_dssp ----CTTTTSEEGGG-----CCCEETTSCHHHHHHHHHTCCCSEEEEE--SSSTTSEEEEEEHHHHHHHHHTT----CCC
T ss_pred cCCCCHHHhCccHHH-----eEEEcCCCCHHHHHHHHHhCCCCEEEEE--eCCCCeEEEEEEHHHHHHHHhhc----Ccc
Confidence 678899999994322 8899999999999999999999999999 666 8999999999998875433 257
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHH
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGE 195 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~ 195 (208)
+++++| + +++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+...++
T Consensus 108 ~v~~im-~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~de 169 (172)
T 3lhh_A 108 ELVDLV-K--NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQE 169 (172)
T ss_dssp CGGGGC-B--CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC--
T ss_pred cHHHHh-c--CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCccc
Confidence 899999 6 7999999999999999999999999999997 5 999999999999998766543
No 5
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.88 E-value=3.3e-22 Score=143.69 Aligned_cols=124 Identities=12% Similarity=0.278 Sum_probs=106.4
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
+...+++++|++... ++++++++|+.+|++.|.+++++++||+ +++ ++++|+|+.+||++++.... ...
T Consensus 3 l~~~~v~~iM~~~~~-----v~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~~Givt~~dl~~~~~~~~---~~~ 72 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPV-----VFRVDATMTINEFLDKHKDTPFSRPLVY--SEQKDNIIGFVHRLELFKMQQSGS---GQK 72 (130)
T ss_dssp ----CCTTTSCCBCC-----CCEEETTSBHHHHHHHTTTCSCSCCEEE--SSSTTCEEEECCHHHHHHHHHTTT---TTS
T ss_pred cCcCCHhhCCCcHHH-----EEEEcCCCCHHHHHHHHHhCCCCEEEEE--eCCCCcEEEEEEHHHHHHHHhcCC---CcC
Confidence 567899999997533 6789999999999999999999999999 666 89999999999988654432 367
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHH
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~ 190 (208)
+++++|. ++.++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+
T Consensus 73 ~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 73 QLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp BHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 8999995 4789999999999999999999999999986 4 9999999999998864
No 6
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.88 E-value=2.2e-22 Score=148.94 Aligned_cols=143 Identities=43% Similarity=0.640 Sum_probs=117.4
Q ss_pred ccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhh
Q 028491 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136 (208)
Q Consensus 57 ~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~ 136 (208)
.+|+++|.+... .+++++++.+++|+.+|++.|.+++++++||+ + +++++|+|+.+||++++..........++++
T Consensus 7 ~~v~dim~~~~~-~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~--~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 82 (157)
T 4fry_A 7 TTVAQILKAKPD-SGRTIYTVTKNDFVYDAIKLMAEKGIGALLVV--D-GDDIAGIVTERDYARKVVLQERSSKATRVEE 82 (157)
T ss_dssp CBHHHHHHHSTT-TTCCCCEEETTSBHHHHHHHHHHHTCSEEEEE--S-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHH
T ss_pred HHHHHHHhcccc-cCCCCeEECCCCcHHHHHHHHHHcCCCEEEEe--e-CCEEEEEEEHHHHHHHHHhccCCccccCHHH
Confidence 579999996520 00016999999999999999999999999998 4 7899999999999887766554445789999
Q ss_pred hhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHhhHHHHHHHHHhhhc
Q 028491 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205 (208)
Q Consensus 137 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~~~~~~~~~~~~~~~ 205 (208)
+|.+ ++.++++++++.+|++.|.+++++++||+|++ ++|+||..|+++++.+........+++++..
T Consensus 83 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~l~~~~~~~~~~~~~~i~~ 150 (157)
T 4fry_A 83 IMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIADQQFTISQLEHYIHG 150 (157)
T ss_dssp HSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTTCCCCCC--------
T ss_pred HcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHhhHHHHHhhccC
Confidence 9998 89999999999999999999999999999977 9999999999999998877666666766654
No 7
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.88 E-value=4.6e-22 Score=146.86 Aligned_cols=129 Identities=18% Similarity=0.306 Sum_probs=110.3
Q ss_pred cccccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCc
Q 028491 54 LENISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131 (208)
Q Consensus 54 ~~~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~ 131 (208)
+...+|+++|++ + ++++++++|+.+|++.|.+++++++||+..+++++++|+||.+||++++.... .
T Consensus 17 l~~~~v~~iM~~~~~-------~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----~ 85 (153)
T 3oco_A 17 MNDKVASDVMVDRTS-------MSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----K 85 (153)
T ss_dssp HHHCBHHHHSEEGGG-------CCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----T
T ss_pred cCCCEeeeEecchhh-------eEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----C
Confidence 567899999997 5 89999999999999999999999999992134589999999999988765442 5
Q ss_pred cchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHHH
Q 028491 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGEL 196 (208)
Q Consensus 132 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~~ 196 (208)
.+++++| + +++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+...++.
T Consensus 86 ~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de~ 149 (153)
T 3oco_A 86 AKISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDEQ 149 (153)
T ss_dssp SBGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC------
T ss_pred CcHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCcc
Confidence 7899999 6 7999999999999999999999999999987 5 9999999999999998765543
No 8
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.88 E-value=7.8e-22 Score=142.33 Aligned_cols=122 Identities=34% Similarity=0.558 Sum_probs=110.2
Q ss_pred cHHHhhc---ccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 58 SVAEVLM---TKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 58 ~v~~~m~---~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
+++++|. ++ ++++++++|+.+|++.|.+++.+++||+ | +++++|+|+.+||++.+..++......++
T Consensus 7 ~v~~im~~~~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~Givt~~dl~~~~~~~~~~~~~~~v 76 (135)
T 2rc3_A 7 TVKHLLQEKGHT-------VVAIGPDDSVFNAMQKMAADNIGALLVM--K-DEKLVGILTERDFSRKSYLLDKPVKDTQV 76 (135)
T ss_dssp BHHHHHHHHCCC-------CCEECTTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHGGGSSSCGGGSBG
T ss_pred eHHHHHhcCCCC-------cEEECCCCcHHHHHHHHHhcCCCEEEEE--E-CCEEEEEEehHHHHHHHHHcCCCcccCCH
Confidence 8999999 66 8999999999999999999999999999 6 78999999999988766555433457899
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHh
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~ 191 (208)
+++|.+ ++.++++++++.+|++.|.+++++.+||+|++ ++|+||..|+++++.+.
T Consensus 77 ~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 77 KEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp GGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHC-
T ss_pred HHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHHHHhc
Confidence 999998 89999999999999999999999999999977 99999999999998754
No 9
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.88 E-value=2.5e-22 Score=144.52 Aligned_cols=126 Identities=25% Similarity=0.522 Sum_probs=109.8
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~ 133 (208)
+...+++++|.++ +.++++++|+.+|++.|.+++.+++||+ |++++++|+|+.+|+++..+..+......+
T Consensus 5 ~~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 75 (133)
T 1y5h_A 5 FTMTTARDIMNAG-------VTCVGEHETLTAAAQYMREHDIGALPIC--GDDDRLHGMLTDRDIVIKGLAAGLDPNTAT 75 (133)
T ss_dssp ---CCHHHHSEET-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CGGGBEEEEEEHHHHHHTTGGGTCCTTTSB
T ss_pred hhhcCHHHHhcCC-------ceEeCCCCCHHHHHHHHHHhCCCeEEEE--CCCCeEEEEEeHHHHHHHHHhcCCCccccC
Confidence 4457999999988 8999999999999999999999999999 788999999999998743444443334689
Q ss_pred hhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHH
Q 028491 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 134 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~ 190 (208)
++++|.+ ++.++++++++.+|++.|.+++.+++||+|++ ++|+||..|+++++.+
T Consensus 76 v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 76 AGELARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPE 131 (133)
T ss_dssp HHHHHTT--CCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHTCC-
T ss_pred HHHHhcC--CCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHh
Confidence 9999988 89999999999999999999999999999989 9999999999987653
No 10
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.88 E-value=9.7e-22 Score=141.41 Aligned_cols=124 Identities=12% Similarity=0.274 Sum_probs=106.5
Q ss_pred ccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCC-CceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE-QQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 57 ~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~-~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
++++++|++..+ ++++++++|+.+|++.|.+++++++||+ ++ +++++|+|+.+||++++.. +......+++
T Consensus 2 ~~v~~iM~~~~~-----~~~v~~~~~v~~a~~~m~~~~~~~~pVv--~~~~~~lvGivt~~dl~~~~~~-~~~~~~~~v~ 73 (130)
T 3hf7_A 2 VSVNDIMVPRNE-----IVGIDINDDWKSIVRQLTHSPHGRIVLY--RDSLDDAISMLRVREAYRLMTE-KKEFTKEIML 73 (130)
T ss_dssp CBHHHHSEEGGG-----CCEEETTSCHHHHHHHHHTCSSSEEEEE--SSSGGGEEEEEEHHHHHHHHTS-SSCCCHHHHH
T ss_pred cCHHHhCccHHH-----EEEEcCCCCHHHHHHHHHHCCCCeEEEE--cCCCCcEEEEEEHHHHHHHHhc-cCccchhhHH
Confidence 589999986322 8899999999999999999999999999 54 5899999999998876543 3223356899
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHh
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~ 191 (208)
++|. +++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.++
T Consensus 74 ~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 74 RAAD---EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp HHSB---CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred Hhcc---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 9994 5889999999999999999999999999986 4 99999999999998764
No 11
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.88 E-value=4.6e-22 Score=147.77 Aligned_cols=127 Identities=15% Similarity=0.221 Sum_probs=110.0
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCC---CCcc
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS---PKYT 132 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~---~~~~ 132 (208)
..+++++|.|..+ ++++.+++|+.+|++.|.+++++++||+ |++++++|+||.+|+++++...... ....
T Consensus 14 ~~~~~~iM~P~~~-----v~~v~~~~t~~~a~~~m~~~~~s~~pVv--d~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~ 86 (156)
T 3k6e_A 14 LGQEETFLTPAKN-----LAVLIDTHNADHATLLLSQMTYTRVPVV--TDEKQFVGTIGLRDIMAYQMEHDLSQEIMADT 86 (156)
T ss_dssp HTTGGGGEEETTS-----SCCEETTSBHHHHHHHHTTSSSSEEEEE--CC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTS
T ss_pred hccHHHhCcchhH-----eEEECCcCCHHHHHHHHHHcCCcEEEEE--cCCCcEEEEEEecchhhhhhhccccccccccc
Confidence 3578899998644 8999999999999999999999999999 7889999999999998877654422 2367
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHhhH
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQQK 193 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~~~ 193 (208)
+++++|.+ ++.++++++++.+|++.|.++++ +||+|++ ++|+||..|+++++.....
T Consensus 87 ~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~~~~~ 145 (156)
T 3k6e_A 87 DIVHMTKT--DVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp BGGGTCBC--SCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHHHHSC
T ss_pred CHHHhhcC--CceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHHHHhc
Confidence 89999998 89999999999999999998764 9999865 9999999999999976544
No 12
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.87 E-value=1.8e-22 Score=146.34 Aligned_cols=128 Identities=16% Similarity=0.343 Sum_probs=105.5
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
+.+|+++|++..+ ++++++++|+.+|++.|.+++++++||+ +++ ++++|+||.+||++++.... ....++
T Consensus 2 ~~~v~~iM~~~~~-----~~~v~~~~~v~~a~~~m~~~~~~~~pVv--d~~~~~~vGivt~~dl~~~~~~~~--~~~~~v 72 (136)
T 3lfr_A 2 DLQVRDIMVPRSQ-----MISIKATQTPREFLPAVIDAAHSRYPVI--GESHDDVLGVLLAKDLLPLILKAD--GDSDDV 72 (136)
T ss_dssp -CBHHHHSEEGGG-----CCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGGGSSS--GGGCCG
T ss_pred CCChHhccccHHH-----EEEEcCCCCHHHHHHHHHhCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHHhcc--CCCcCH
Confidence 4689999995422 7899999999999999999999999999 666 79999999999887643222 346789
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHH
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGE 195 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~ 195 (208)
+++|.+ ++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+...++
T Consensus 73 ~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de 132 (136)
T 3lfr_A 73 KKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDE 132 (136)
T ss_dssp GGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-------
T ss_pred HHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCc
Confidence 999964 889999999999999999999999999986 4 999999999999998765543
No 13
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.87 E-value=1.5e-21 Score=138.27 Aligned_cols=118 Identities=28% Similarity=0.430 Sum_probs=107.2
Q ss_pred ccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhh
Q 028491 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136 (208)
Q Consensus 57 ~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~ 136 (208)
.+++++|.++ ++++++++|+.+|++.|.+++.+.+||+ |++++++|+|+.+||++++... ..++++
T Consensus 1 ~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~G~vt~~dl~~~~~~~-----~~~v~~ 66 (122)
T 3kpb_A 1 TLVKDILSKP-------PITAHSNISIMEAAKILIKHNINHLPIV--DEHGKLVGIITSWDIAKALAQN-----KKTIEE 66 (122)
T ss_dssp CBHHHHCCSC-------CCCEETTSBHHHHHHHHHHHTCSCEEEE--CTTSBEEEEECHHHHHHHHHTT-----CCBGGG
T ss_pred CchHHhhCCC-------CEEeCCCCcHHHHHHHHHHcCCCeEEEE--CCCCCEEEEEEHHHHHHHHHhc-----ccCHHH
Confidence 3689999998 8999999999999999999999999999 7889999999999998765432 348999
Q ss_pred hhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHH
Q 028491 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 137 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~ 190 (208)
+|.+ ++.++++++++.+|++.|.+++.+.+||+|+ + ++|+||..|+++++.+
T Consensus 67 ~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 IMTR--NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp TSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred HhcC--CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 9988 8999999999999999999999999999998 5 9999999999998864
No 14
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.87 E-value=2.3e-21 Score=144.20 Aligned_cols=126 Identities=20% Similarity=0.288 Sum_probs=111.9
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhc-------CCC
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ-------GRS 128 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~-------~~~ 128 (208)
..+|+++|.++ ++++.+++|+.+|++.|.+++++.+||+ |++++++|+|+.+||++.+... ...
T Consensus 4 ~~~v~dim~~~-------~~~v~~~~tl~~a~~~m~~~~~~~~pVv--d~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~ 74 (160)
T 2o16_A 4 MIKVEDMMTRH-------PHTLLRTHTLNDAKHLMEALDIRHVPIV--DANKKLLGIVSQRDLLAAQESSLQRSAQGDSL 74 (160)
T ss_dssp CCBGGGTSEES-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHHHCC--------
T ss_pred cCcHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHHHhhcccccccch
Confidence 56899999988 8999999999999999999999999999 7789999999999998776531 112
Q ss_pred CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHhh
Q 028491 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQ 192 (208)
Q Consensus 129 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~~ 192 (208)
....+++++|.+ +++++++++++.+|+..|.+++++.+||+|++ ++|+||..|+++.+.+..
T Consensus 75 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 75 AFETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp -CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHHHHHHH
T ss_pred hcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHHHh
Confidence 346789999998 89999999999999999999999999999989 999999999999987654
No 15
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.87 E-value=2e-21 Score=139.68 Aligned_cols=125 Identities=36% Similarity=0.518 Sum_probs=111.2
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
...+++++|.++ ++++++++|+.+|++.|.+++.+++||+ | +++++|+|+.+|+++.+.... ....++
T Consensus 2 ~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~Givt~~dl~~~~~~~~--~~~~~v 69 (133)
T 2ef7_A 2 EEEIVKEYMKTQ-------VISVTKDAKLNDIAKVMTEKNIGSVIVV--D-GNKPVGIITERDIVKAIGKGK--SLETKA 69 (133)
T ss_dssp CCCBGGGTSBCS-------CCEEETTCBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHTTC--CTTCBG
T ss_pred CcccHHHhccCC-------CEEECCCCcHHHHHHHHHhcCCCEEEEE--E-CCEEEEEEcHHHHHHHHhcCC--CcccCH
Confidence 467899999998 8999999999999999999999999999 6 789999999999887654332 246789
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhH
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQK 193 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~ 193 (208)
+++|.+ ++.++++++++.+|++.|.+++.+.+||+|+ + ++|+||..|+++.+.+...
T Consensus 70 ~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~ 128 (133)
T 2ef7_A 70 EEFMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFE 128 (133)
T ss_dssp GGTSEE--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC-
T ss_pred HHHcCC--CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHH
Confidence 999988 7999999999999999999999999999985 5 9999999999999987654
No 16
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.87 E-value=1.8e-21 Score=138.24 Aligned_cols=121 Identities=27% Similarity=0.373 Sum_probs=108.4
Q ss_pred ccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhh
Q 028491 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136 (208)
Q Consensus 57 ~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~ 136 (208)
++++++|.++ +.++++++|+.+|++.|.+++.+++||+ | +++++|+|+.+|+++.+.... .....++++
T Consensus 1 m~v~~~m~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d-~~~~~G~it~~dl~~~~~~~~-~~~~~~v~~ 69 (125)
T 1pbj_A 1 MRVEDVMVTD-------VDTIDITASLEDVLRNYVENAKGSSVVV--K-EGVRVGIVTTWDVLEAIAEGD-DLAEVKVWE 69 (125)
T ss_dssp -CHHHHCBCS-------CCEEETTCBHHHHHHHHHHHCCCEEEEE--E-TTEEEEEEEHHHHHHHHHHTC-CTTTSBHHH
T ss_pred CCHHHhcCCC-------ceEECCCCcHHHHHHHHHHcCCCEEEEE--e-CCeeEEEEeHHHHHHHHhcCC-cccccCHHH
Confidence 4689999988 8999999999999999999999999999 6 899999999999887654432 334789999
Q ss_pred hhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHH
Q 028491 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 137 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~ 190 (208)
+|.+ ++.++++++++.++++.|.+++.+++||+|++ ++|+||..|+++++.+
T Consensus 70 ~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 70 VMER--DLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAKMA 122 (125)
T ss_dssp HCBC--GGGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHC-
T ss_pred HcCC--CCeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHHHHh
Confidence 9998 89999999999999999999999999999989 9999999999998864
No 17
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.87 E-value=1.2e-21 Score=140.54 Aligned_cols=123 Identities=15% Similarity=0.272 Sum_probs=107.2
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCCccc
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPKYTR 133 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~~~~ 133 (208)
...+++++|++..+ ++++++++|+.+|++.|.+++++++||+ +++ ++++|+||.+||++++. ....+
T Consensus 3 ~~~~v~diM~~~~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~~Givt~~dl~~~~~-----~~~~~ 70 (129)
T 3jtf_A 3 AERTVADIMVPRSR-----MDLLDISQPLPQLLATIIETAHSRFPVY--EDDRDNIIGILLAKDLLRYML-----EPALD 70 (129)
T ss_dssp -CCBHHHHCEEGGG-----CCCEETTSCHHHHHHHHHHSCCSEEEEE--SSSTTCEEEEEEGGGGGGGGT-----CTTSC
T ss_pred CCCCHHHhCccHHH-----eEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCCcEEEEEEHHHHHhHhc-----cCCcC
Confidence 46799999995422 7899999999999999999999999999 664 89999999999876532 13578
Q ss_pred hhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhh
Q 028491 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQ 192 (208)
Q Consensus 134 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~ 192 (208)
++++|.+ ++++++++++.+|++.|.+++.+.+||+|+ + ++|+||..|+++.+.++.
T Consensus 71 v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei 128 (129)
T 3jtf_A 71 IRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDI 128 (129)
T ss_dssp GGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC
T ss_pred HHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 9999964 789999999999999999999999999997 5 999999999999998653
No 18
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.87 E-value=2.8e-21 Score=139.82 Aligned_cols=127 Identities=26% Similarity=0.481 Sum_probs=112.9
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTR 133 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~ 133 (208)
+...+++++|.++ ++++++++|+.+|++.|.+++++++||+ |++++++|+|+.+||++.++..+. ....+
T Consensus 4 l~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~-~~~~~ 73 (138)
T 2yzi_A 4 DMKAPIKVYMTKK-------LLGVKPSTSVQEASRLMMEFDVGSLVVI--NDDGNVVGFFTKSDIIRRVIVPGL-PYDIP 73 (138)
T ss_dssp CTTSBGGGTCBCC-------CCEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHTTTTCC-CTTSB
T ss_pred hhhhhHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHHhcCC-cccCC
Confidence 5678999999988 8999999999999999999999999999 778999999999998755444433 34688
Q ss_pred hhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeec-Cc-eeEEEEHHHHHHHHHHhhH
Q 028491 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR-IVGMISIVDVVRAVVEQQK 193 (208)
Q Consensus 134 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd-~~-~vGiit~~dll~~~~~~~~ 193 (208)
++++|.+ ++.++++++++.+|++.|.+++++++ |+| ++ ++|+||..|+++.+.+...
T Consensus 74 v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~ 132 (138)
T 2yzi_A 74 VERIMTR--NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLE 132 (138)
T ss_dssp GGGTCBC--SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSC
T ss_pred HHHHhhC--CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHH
Confidence 9999988 89999999999999999999999999 998 55 9999999999999876543
No 19
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.87 E-value=7.5e-22 Score=141.21 Aligned_cols=122 Identities=15% Similarity=0.380 Sum_probs=104.7
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
..+++++|++..+ ++++++++|+.+|++.|.+++++++||+ +++ ++++|+||.+||++++... ....++
T Consensus 2 ~~~v~diM~~~~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~vGivt~~dl~~~~~~~---~~~~~v 71 (127)
T 3nqr_A 2 DQRVRDIMIPRSQ-----MITLKRNQTLDECLDVIIESAHSRFPVI--SEDKDHIEGILMAKDLLPFMRSD---AEAFSM 71 (127)
T ss_dssp -CBHHHHSEEGGG-----CCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGGSTT---CCCCCH
T ss_pred CcCHHHhcccHHH-----eEEEcCCCCHHHHHHHHHhCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHhcc---CCCCCH
Confidence 4689999996422 7899999999999999999999999999 676 8999999999988754322 246789
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHH
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~ 190 (208)
+++|.+ +.++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+
T Consensus 72 ~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 72 DKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp HHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred HHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 999954 679999999999999999999999999985 4 9999999999998754
No 20
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.87 E-value=1.7e-21 Score=143.07 Aligned_cols=118 Identities=26% Similarity=0.457 Sum_probs=107.7
Q ss_pred ccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 57 ISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 57 ~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
.+|+++|.+ + ++++++++|+.+|++.|.+++++++||+ |++++++|+||.+||++.+. .+......++
T Consensus 28 ~~v~dim~~~~~-------~~~v~~~~~~~~a~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~-~~~~~~~~~v 97 (149)
T 3k2v_A 28 LRVNDIMHTGDE-------IPHVGLQATLRDALLEITRKNLGMTAIC--DDDMNIIGIFTDGDLRRVFD-TGVDMRDASI 97 (149)
T ss_dssp SBGGGTSBCGGG-------SCEECTTCBHHHHHHHHHHHTSSEEEEE--CTTCBEEEEEEHHHHHHHHC-SSSCCTTCBH
T ss_pred cCHHHHhcCCCC-------CeEECCCCcHHHHHHHHHhCCCcEEEEE--CCCCcEEEEecHHHHHHHHh-cCCCcccCcH
Confidence 589999999 7 8999999999999999999999999999 78899999999999887543 4333457899
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHH
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVR 186 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~ 186 (208)
+++|.+ ++.++++++++.+|++.|.+++++.+||+|++ ++|+||..|+++
T Consensus 98 ~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil~ 148 (149)
T 3k2v_A 98 ADVMTR--GGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLLR 148 (149)
T ss_dssp HHHSEE--SCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHTC
T ss_pred HHHcCC--CCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhhc
Confidence 999998 79999999999999999999999999999999 999999999975
No 21
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.86 E-value=2.7e-21 Score=141.92 Aligned_cols=131 Identities=13% Similarity=0.281 Sum_probs=111.6
Q ss_pred CcccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCC----C
Q 028491 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR----S 128 (208)
Q Consensus 53 ~~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~----~ 128 (208)
.+...+|+++|.+..+ ++++++++|+.+|++.|.+++++++||+ |++++++|+||.+||++++..... .
T Consensus 11 ~l~~~~v~~im~~~~~-----~~~v~~~~~l~~a~~~~~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~ 83 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEK-----VAHVQIGNGLEHALLVLVKSGYSAIPVL--DPMYKLHGLISTAMILDGILGLERIEFER 83 (150)
T ss_dssp HHHHCBHHHHSEEGGG-----SCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHTBCSSSBCGGG
T ss_pred hhhcCChhhcccCCCc-----eEEECCCCcHHHHHHHHHHcCCcEEEEE--CCCCCEEEEEEHHHHHHHHHhhcccchhH
Confidence 4678999999995312 7899999999999999999999999999 788999999999999876532111 1
Q ss_pred CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHH
Q 028491 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKG 194 (208)
Q Consensus 129 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~ 194 (208)
....+++++|.+ ++.++++++++.+|++.|.++++ +||+|+ + ++|+||..|+++.+.+...+
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~~ 147 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVRQ 147 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhHh
Confidence 246789999998 89999999999999999999987 999995 5 99999999999999876653
No 22
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.86 E-value=3.9e-21 Score=138.98 Aligned_cols=124 Identities=31% Similarity=0.500 Sum_probs=109.7
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHH-HHHHHhcCCCCCcc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDY-LRKIVGQGRSPKYT 132 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl-~~~~~~~~~~~~~~ 132 (208)
+...+++++|.++ +.++++++|+.+|.+.|.+++.+++||+ |++++++|+|+.+|+ ++.+. .+ .....
T Consensus 5 l~~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~-~~-~~~~~ 73 (138)
T 2p9m_A 5 LKNIKVKDVMTKN-------VITAKRHEGVVEAFEKMLKYKISSLPVI--DDENKVIGIVTTTDIGYNLIR-DK-YTLET 73 (138)
T ss_dssp CTTCBGGGTSBCS-------CCCEETTSBHHHHHHHHHHHTCCEEEEE--CTTCBEEEEEEHHHHHHHHTT-TC-CCSSC
T ss_pred cccCCHHHhhcCC-------ceEECCCCcHHHHHHHHHHCCCcEEEEE--CCCCeEEEEEEHHHHHHHHHh-hc-ccCCc
Confidence 5678999999988 8999999999999999999999999999 778999999999998 76443 22 23477
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcC-----CCEeeeec-Cc-eeEEEEHHHHHHHHHH
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKH-----IRHVPVID-GR-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~-----~~~lpVvd-~~-~vGiit~~dll~~~~~ 190 (208)
+++++|.+ ++.++++++++.++++.|.+++ .+.+||+| ++ ++|+||..|+++.+.+
T Consensus 74 ~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 74 TIGDVMTK--DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp BHHHHSCS--SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CHHHHhCC--CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 89999998 8999999999999999999999 99999999 45 9999999999998865
No 23
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.86 E-value=8.8e-22 Score=140.98 Aligned_cols=122 Identities=12% Similarity=0.176 Sum_probs=108.1
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
.+.+++++|.++ +.++++++|+.+|++.|.+++.+++||+ |+ ++++|+|+.+||++++. ++ .....++
T Consensus 3 ~s~~v~~~m~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~-~~~~Givt~~dl~~~~~-~~-~~~~~~v 70 (128)
T 3gby_A 3 ASVTFSYLAETD-------YPVFTLGGSTADAARRLAASGCACAPVL--DG-ERYLGMVHLSRLLEGRK-GW-PTVKEKL 70 (128)
T ss_dssp TTCBGGGGCBCC-------SCCEETTSBHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHTTCS-SS-CCTTCBC
T ss_pred cceEHHHhhcCC-------cceECCCCCHHHHHHHHHHCCCcEEEEE--EC-CEEEEEEEHHHHHHHHh-hC-CcccCcH
Confidence 367999999999 8999999999999999999999999999 66 99999999999876532 22 1223679
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHH
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~ 190 (208)
+++|.+ ++.++++++++.+|++.|.+++.+++||+|+ + ++|+||..|+++.+.+
T Consensus 71 ~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 71 GEELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CGGGCB--CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred HHHccC--CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 999998 8999999999999999999999999999985 4 9999999999999865
No 24
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.86 E-value=4.4e-21 Score=148.66 Aligned_cols=128 Identities=15% Similarity=0.247 Sum_probs=111.8
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhc---CCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCC
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQH---NIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~---~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~ 130 (208)
+...+++++|+++ ++++++++|+.+|++.|++. +++++||+ |++++++|+|+.+||+.+ ..
T Consensus 51 ~~~~~v~~iM~~~-------~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vv--d~~~~lvGivt~~dll~~-------~~ 114 (205)
T 3kxr_A 51 YSENEIGRYTDHQ-------MLVLSDKATVAQAQRFFRRIELDCNDNLFIV--DEADKYLGTVRRYDIFKH-------EP 114 (205)
T ss_dssp SCTTCGGGGCBCC-------CCEEETTCBHHHHHHHHHHCCCTTCCEEEEE--CTTCBEEEEEEHHHHTTS-------CT
T ss_pred CCcchHHhhccCc-------eEEECCCCcHHHHHHHHHhhCccCeeEEEEE--cCCCeEEEEEEHHHHHhC-------CC
Confidence 5678999999998 99999999999999999987 78999999 789999999999998642 34
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHhhHHHHHHH
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQQKGELKRL 199 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~~~~~~~~~ 199 (208)
..+++++|.+ +++++++++++.+|++.|.+++++.+||+|++ ++|+||..|+++.+.+...+...++
T Consensus 115 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~ed~~~~ 183 (205)
T 3kxr_A 115 HEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHYEAQLMAT 183 (205)
T ss_dssp TSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC------
T ss_pred cchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHHHHHHHh
Confidence 6789999988 89999999999999999999999999999964 9999999999999988776655443
No 25
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.86 E-value=8.5e-21 Score=137.93 Aligned_cols=121 Identities=22% Similarity=0.319 Sum_probs=108.0
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCc--eEEEeechHHHHHHHHhcCCCCCccc
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQ--HIAGIFTERDYLRKIVGQGRSPKYTR 133 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~--~~iG~vt~~dl~~~~~~~~~~~~~~~ 133 (208)
..+++++|.++ ++++++++|+.+|++.|.+++++++||+ |+++ +++|+|+.+||++.+.... ....+
T Consensus 4 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~~~Givt~~dl~~~~~~~~--~~~~~ 72 (141)
T 2rih_A 4 AIRTSELLKRP-------PVSLPETATIREVATELAKNRVGLAVLT--ARDNPKRPVAVVSERDILRAVAQRL--DLDGP 72 (141)
T ss_dssp -CBGGGGCCSC-------CEEEETTCBHHHHHHHHHHHTCSEEEEE--ETTEEEEEEEEEEHHHHHHHHHTTC--CTTSB
T ss_pred ceEHHHHhcCC-------CeEeCCCCcHHHHHHHHHHcCCCEEEEE--cCCCcceeEEEEEHHHHHHHHhcCC--CCCCC
Confidence 46899999988 9999999999999999999999999999 6777 9999999999988654332 24688
Q ss_pred hhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHH
Q 028491 134 VAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 134 v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~ 190 (208)
++++|.+ ++.+++++ ++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+..
T Consensus 73 v~~~m~~--~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 73 AMPIANS--PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp SGGGCBC--CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred HHHHcCC--CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 9999988 89999999 9999999999999999999985 5 9999999999988765
No 26
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.85 E-value=3.1e-21 Score=141.40 Aligned_cols=130 Identities=23% Similarity=0.401 Sum_probs=107.7
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhc---------
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ--------- 125 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~--------- 125 (208)
...+++++|.+..+ ++++.+++|+.+|++.|.+++++++||+ |++++++|+|+.+||+..+...
T Consensus 3 ~~~~v~~im~~~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~ 75 (152)
T 4gqw_A 3 GVYTVGEFMTKKED-----LHVVKPTTTVDEALELLVENRITGFPVI--DEDWKLVGLVSDYDLLALDSGDSTWKTFNAV 75 (152)
T ss_dssp CCSBGGGTSEESTT-----CCCBCTTSBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHTTCC----CCHHHHHH
T ss_pred ceEEhhhccCCCCC-----CeEECCCCcHHHHHHHHHHcCCceEEEE--eCCCeEEEEEEHHHHHHhhcccCcccchHHH
Confidence 35789999999211 8999999999999999999999999999 7889999999999987432110
Q ss_pred ---CCCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhH
Q 028491 126 ---GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQK 193 (208)
Q Consensus 126 ---~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~ 193 (208)
.......+++++|.+ +++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+...
T Consensus 76 ~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~~ 146 (152)
T 4gqw_A 76 QKLLSKTNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 146 (152)
T ss_dssp HTC-----CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC---
T ss_pred HHHHHHhccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhccc
Confidence 011235789999998 7899999999999999999999999999985 5 9999999999999987544
No 27
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.85 E-value=2.3e-20 Score=138.62 Aligned_cols=128 Identities=16% Similarity=0.251 Sum_probs=110.6
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCC--CceEEEeechHHHHHHHHhcCCC---
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE--QQHIAGIFTERDYLRKIVGQGRS--- 128 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~--~~~~iG~vt~~dl~~~~~~~~~~--- 128 (208)
+...+++++|.++ ++++++++|+.+|++.|.+++++++||+ |+ +++++|+||..||++.+......
T Consensus 10 ~~~~~v~dim~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~pVv--d~~~~~~~~Givt~~dl~~~~~~~~~~~~~ 80 (164)
T 2pfi_A 10 SHHVRVEHFMNHS-------ITTLAKDTPLEEVVKVVTSTDVTEYPLV--ESTESQILVGIVQRAQLVQALQAEPPSRAP 80 (164)
T ss_dssp CCSCBHHHHCBCC-------CCCEETTCBHHHHHHHHHTCCCSEEEEE--SCTTTCBEEEEEEHHHHHHHHHC-------
T ss_pred ccCCCHHHHcCCC-------CeEECCCCcHHHHHHHHHhCCCCceeEE--ecCCCCEEEEEEEHHHHHHHHHhhccccCC
Confidence 4468999999998 8999999999999999999999999999 65 78999999999988765432211
Q ss_pred CCccchhhhhccCCC------eEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHhh
Q 028491 129 PKYTRVAEIMTDENK------LITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQ 192 (208)
Q Consensus 129 ~~~~~v~~im~~~~~------~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~~ 192 (208)
....++.++|.. + +.++++++++.+|++.|.+++++++||+|++ ++|+||..|+++.+.+..
T Consensus 81 ~~~~~v~~~m~~--~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 81 GHQQCLQDILAR--GCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp CCCCBHHHHHHT--TCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHHHHHH
T ss_pred cccchhhhhhcc--cccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHhhh
Confidence 134689999987 5 7899999999999999999999999999977 999999999999987643
No 28
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.85 E-value=6.6e-21 Score=143.62 Aligned_cols=127 Identities=20% Similarity=0.399 Sum_probs=109.4
Q ss_pred cccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcC-------
Q 028491 56 NISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG------- 126 (208)
Q Consensus 56 ~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~------- 126 (208)
.++|+++|.+ + ++++++++|+.+|++.|.+++++++||+ |++++++|+|+.+||++.....+
T Consensus 3 ~~~v~dim~~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 73 (180)
T 3sl7_A 3 GYTVGDFMTPRQN-------LHVVKPSTSVDDALELLVEKKVTGLPVI--DDNWTLVGVVSDYDLLALDSISGRSQNDTN 73 (180)
T ss_dssp CCBHHHHSEEGGG-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHTCC------------
T ss_pred ceeHHHhcCCCCC-------ceeeCCCCcHHHHHHHHHHcCCCeEEEE--CCCCeEEEEEEHHHHHhhhhhccccCCccc
Confidence 4689999999 6 8999999999999999999999999999 78899999999999874221110
Q ss_pred -------------------CCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHH
Q 028491 127 -------------------RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVV 185 (208)
Q Consensus 127 -------------------~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll 185 (208)
......+++++|.+ +++++++++++.+|++.|.+++++++||+|+ + ++|+||..|++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil 151 (180)
T 3sl7_A 74 LFPDVDSTWKTFNELQKLISKTYGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVV 151 (180)
T ss_dssp -------CCCSHHHHHHHHHTTTTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHH
T ss_pred ccccccchhhhhHHHHHHHhccccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHH
Confidence 01236789999998 7899999999999999999999999999985 5 99999999999
Q ss_pred HHHHHhhH
Q 028491 186 RAVVEQQK 193 (208)
Q Consensus 186 ~~~~~~~~ 193 (208)
+.+.....
T Consensus 152 ~~~~~~~~ 159 (180)
T 3sl7_A 152 RAALQIKR 159 (180)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99987554
No 29
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.85 E-value=2.8e-20 Score=135.11 Aligned_cols=129 Identities=16% Similarity=0.305 Sum_probs=107.5
Q ss_pred cccccHHH---hhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCC
Q 028491 54 LENISVAE---VLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPK 130 (208)
Q Consensus 54 ~~~~~v~~---~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~ 130 (208)
+...++++ +|.++ ++++++++|+.+|++.|.+++++++||+ |++++++|+|+.+||++.+........
T Consensus 5 ~~~~~v~~~~~~~~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~ 75 (144)
T 2nyc_A 5 FLKIPIGDLNIITQDN-------MKSCQMTTPVIDVIQMLTQGRVSSVPII--DENGYLINVYEAYDVLGLIKGGIYNDL 75 (144)
T ss_dssp GGGSBGGGSSCCBCSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHTC----C
T ss_pred hhhcchhhcCCCCCCC-------ceEECCCCcHHHHHHHHHHcCcceeeEE--cCCCcEEEEEcHHHHHHHhcccccccC
Confidence 33567778 77777 8999999999999999999999999999 778999999999999876654321234
Q ss_pred ccchhhhhccCC----CeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHh
Q 028491 131 YTRVAEIMTDEN----KLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 131 ~~~v~~im~~~~----~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~ 191 (208)
..+++++|.+.+ ++.++++++++.+|++.|.+++.+.+||+|+ + ++|+||..|+++.+.+.
T Consensus 76 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 76 SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp CSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred CccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHhc
Confidence 678999997521 4789999999999999999999999999985 5 99999999999998653
No 30
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.84 E-value=2e-20 Score=138.86 Aligned_cols=130 Identities=20% Similarity=0.380 Sum_probs=113.1
Q ss_pred CcccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 53 ~~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
.+..++|+++|.+. +++.+++|+.+|++.|.+++++++||+ |++++++|+||.+||++++.... .....
T Consensus 13 ~l~~~~v~~im~~~--------~~v~~~~~~~~a~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~-~~~~~ 81 (159)
T 3fv6_A 13 KLKKLQVKDFQSIP--------VVIHENVSVYDAICTMFLEDVGTLFVV--DRDAVLVGVLSRKDLLRASIGQQ-ELTSV 81 (159)
T ss_dssp HHTTCBGGGSCBCC--------CEEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHTSCS-CTTTC
T ss_pred HHhhCCHHHHcCCC--------EEECCCCcHHHHHHHHHHCCCCEEEEE--cCCCcEEEEEeHHHHHHHhhccC-cccCc
Confidence 46678999999865 489999999999999999999999999 78899999999999988664433 34578
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-----ceeEEEEHHHHHHHHHHhhH
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-----RIVGMISIVDVVRAVVEQQK 193 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-----~~vGiit~~dll~~~~~~~~ 193 (208)
+++++|.+.++++++++++++.+|++.|.+++++++||+|+ .++|+||..|+++++.+...
T Consensus 82 ~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~ 147 (159)
T 3fv6_A 82 PVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSE 147 (159)
T ss_dssp BGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHT
T ss_pred CHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhh
Confidence 99999986445889999999999999999999999999974 39999999999999986543
No 31
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.84 E-value=1.6e-20 Score=142.71 Aligned_cols=124 Identities=19% Similarity=0.401 Sum_probs=111.5
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
..+++++|.+. ++++++++|+.+|++.|.+++++.+||+ +++++++|+|+.+||++++..........+++
T Consensus 8 ~~~v~~im~~~-------~~~v~~~~~l~ea~~~~~~~~~~~~pVv--d~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~ 78 (184)
T 1pvm_A 8 FMRVEKIMNSN-------FKTVNWNTTVFDAVKIMNENHLYGLVVK--DDNGNDVGLLSERSIIKRFIPRNKKPDEVPIR 78 (184)
T ss_dssp CCBGGGTSBTT-------CCEEETTCBHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGG
T ss_pred ccCHHHhcCCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHHHhhcccCcccCCHH
Confidence 37899999988 9999999999999999999999999999 77899999999999987654323234567899
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHH
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~ 190 (208)
++|.+ ++.++++++++.+|++.|.+++.+.+||+|+ + ++|+||..|+++++.+
T Consensus 79 ~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 79 LVMRK--PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp GTSBS--SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred HHhCC--CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 99998 8999999999999999999999999999998 5 9999999999998876
No 32
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.84 E-value=2e-20 Score=138.72 Aligned_cols=129 Identities=16% Similarity=0.258 Sum_probs=110.7
Q ss_pred cccccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCC----
Q 028491 54 LENISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR---- 127 (208)
Q Consensus 54 ~~~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~---- 127 (208)
+...+|+++|.+ + ++++++++|+.+|++.|.+++++.+||+ |++++++|+|+..||+..+.....
T Consensus 11 l~~~~v~~im~~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~~pVv--d~~~~lvGivt~~dl~~~~~~~~~~~~~ 81 (159)
T 1yav_A 11 LLEATVGQFMIEADK-------VAHVQVGNNLEHALLVLTKTGYTAIPVL--DPSYRLHGLIGTNMIMNSIFGLERIEFE 81 (159)
T ss_dssp CTTCBHHHHSEEGGG-------SCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTCBEEEEEEHHHHHHHHBCSSSBCGG
T ss_pred HhHhhHHHHhCCccc-------eEEECCCCcHHHHHHHHHhCCCcEEEEE--CCCCCEEEEeEHHHHHHHhhhhcccchh
Confidence 557899999998 6 8999999999999999999999999999 788899999999998876533221
Q ss_pred CCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHH
Q 028491 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGE 195 (208)
Q Consensus 128 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~ 195 (208)
.....+++++|.+ ++.++++++++.+|++.|.++++ +||+|+ + ++|+||..|+++.+.+.....
T Consensus 82 ~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~~~ 147 (159)
T 1yav_A 82 KLDQITVEEVMLT--DIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRSL 147 (159)
T ss_dssp GTTTSBHHHHSBC--SCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC---
T ss_pred hhccCCHHHhcCC--CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHHhh
Confidence 0246789999998 89999999999999999999877 999995 5 999999999999998766543
No 33
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.84 E-value=3.5e-20 Score=140.33 Aligned_cols=137 Identities=17% Similarity=0.265 Sum_probs=113.7
Q ss_pred CcccccHHHhhcccCCCCCCCeEEe--cCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcC----
Q 028491 53 GLENISVAEVLMTKGDDKVGSWLCC--RSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG---- 126 (208)
Q Consensus 53 ~~~~~~v~~~m~~~~~~~~~~~~~v--~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~---- 126 (208)
.+...+|+++|.+..+. +++++ .+++|+.+|++.|.+++++.+||++.|++++++|+|+..||++.+....
T Consensus 7 ~~~~~~v~dim~~~~~~---~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~ 83 (185)
T 2j9l_A 7 FAHKTLAMDVMKPRRND---PLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQD 83 (185)
T ss_dssp --CCCBHHHHSBSCTTS---CCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCS
T ss_pred hhccCcHHHHhcccccC---ceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCC
Confidence 45678999999986211 14667 9999999999999999999999993226789999999999988765421
Q ss_pred -------------------CCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHH
Q 028491 127 -------------------RSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVR 186 (208)
Q Consensus 127 -------------------~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~ 186 (208)
......+++++|.+ +++++++++++.+|++.|.+++++++||+|++ ++|+||..|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGiit~~dll~ 161 (185)
T 2j9l_A 84 GVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLK 161 (185)
T ss_dssp CCCTTCEEECSSSCCCCCTTCCCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred CccccceeecccCCcccccccccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEEEEHHHHHH
Confidence 11246789999988 79999999999999999999999999999977 999999999999
Q ss_pred HHHHhhHH
Q 028491 187 AVVEQQKG 194 (208)
Q Consensus 187 ~~~~~~~~ 194 (208)
.+.+....
T Consensus 162 ~l~~~~~~ 169 (185)
T 2j9l_A 162 HIAQMANQ 169 (185)
T ss_dssp HHHHHCC-
T ss_pred HHHHhhcc
Confidence 99877654
No 34
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.84 E-value=2.2e-20 Score=137.59 Aligned_cols=125 Identities=16% Similarity=0.303 Sum_probs=107.3
Q ss_pred CcccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 53 GLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 53 ~~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
.+...+++++ ++ ++++.+++|+.+|++.|.+++++.+||+ |++|+++|+|+.+||++.+..........
T Consensus 19 ~l~~~~v~~~--~~-------~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~vGivt~~dl~~~~~~~~~~~~~~ 87 (152)
T 2uv4_A 19 SLEELQIGTY--AN-------IAMVRTTTPVYVALGIFVQHRVSALPVV--DEKGRVVDIYSKFDVINLAAEKTYNNLDV 87 (152)
T ss_dssp BHHHHTCSBC--SS-------CCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTSBEEEEEEHHHHHHHHHCSSCCCTTS
T ss_pred hHHHccCCcc--CC-------ceEeCCCCcHHHHHHHHHHcCCceEeEE--CCCCcEEEEEeHHHHHHHhcchhhhhhcc
Confidence 3556777777 44 7889999999999999999999999999 77899999999999987665432223467
Q ss_pred chhhhhc------cCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHH
Q 028491 133 RVAEIMT------DENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 133 ~v~~im~------~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~ 190 (208)
++.++|. + ++.++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++.+.+
T Consensus 88 ~v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 88 SVTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp BGGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC-
T ss_pred hHHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 8999996 5 7899999999999999999999999999997 5 9999999999998753
No 35
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.84 E-value=1.1e-20 Score=142.53 Aligned_cols=127 Identities=19% Similarity=0.269 Sum_probs=109.5
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
+...+|+++|++..+ ++++++++|+.+|++.|.+++++++||+ +++ ++++|+|+.+||+.++.... ..
T Consensus 33 l~~~~v~diM~~~~~-----v~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~lvGivt~~Dl~~~~~~~~----~~ 101 (173)
T 3ocm_A 33 LAERSIRSIMTPRTD-----VSWVNIDDDAATIRQQLTAAPHSFFPVC--RGSLDEVVGIGRAKDLVADLITEG----RV 101 (173)
T ss_dssp HTTSCSTTTSEEGGG-----CCCEETTSCHHHHHHHHHHSSCSEEEEE--SSSTTSEEEEEEHHHHHHHHHHHS----SC
T ss_pred cCCCCHHHhCCcHHH-----eEEEeCCCCHHHHHHHHHhCCCCEEEEE--eCCCCCEEEEEEHHHHHHHHhcCC----cc
Confidence 668899999986322 8899999999999999999999999999 665 89999999999988765432 45
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHH
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGE 195 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~ 195 (208)
+++ +| + +++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+...++
T Consensus 102 ~v~-~~-~--~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de 162 (173)
T 3ocm_A 102 RRN-RL-R--DPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDE 162 (173)
T ss_dssp CGG-GS-B--CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCT
T ss_pred hhH-hc-C--CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCc
Confidence 677 54 4 6889999999999999999999999999986 4 999999999999998765543
No 36
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.83 E-value=2.2e-20 Score=137.95 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=110.8
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCC---CC
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS---PK 130 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~---~~ 130 (208)
+...+++++|.+..+ ++++++++|+.+|++.|.+++++++||+ |++|+++|+||.+||++++...... ..
T Consensus 12 l~~~~v~dim~p~~~-----~~~v~~~~~l~~a~~~m~~~~~~~~~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 12 FLLGQEETFLTPAKN-----LAVLIDTHNADHATLLLSQMTYTRVPVV--TDEKQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHTTGGGGEEEGGG-----CCCEETTSBHHHHHHHHTTCSSSEEEEE--CC-CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHcCcccC-----ceEECCCCCHHHHHHHHHHCCCceEeEE--CCCCEEEEEEcHHHHHHHHHhccccccccc
Confidence 445789999995422 8999999999999999999999999999 7889999999999998876553321 12
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHH
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKG 194 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~ 194 (208)
..+++++|.+ +++++++++++.+|++.|.+++ ++||+|+ + ++|+||..|+++++.+...+
T Consensus 85 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 85 DTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp TSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC
T ss_pred cCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 6789999988 8999999999999999999886 7999995 5 99999999999999877653
No 37
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.83 E-value=6.6e-20 Score=135.70 Aligned_cols=127 Identities=20% Similarity=0.309 Sum_probs=111.1
Q ss_pred cCcccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcE-EEEEecCCCceEEEeechHHHHHHHHhc-----
Q 028491 52 KGLENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGS-LVVLKPGEQQHIAGIFTERDYLRKIVGQ----- 125 (208)
Q Consensus 52 ~~~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~-~pVv~~d~~~~~iG~vt~~dl~~~~~~~----- 125 (208)
..+...+++++|.++ ++++.+++|+.+|++.|.+++++. +||+ |++ +++|+||..||++++...
T Consensus 11 ~~~~~~~v~~im~~~-------~~~v~~~~tl~ea~~~m~~~~~~~~~~Vv--d~~-~~vGivt~~dl~~~~~~~~~~~~ 80 (157)
T 1o50_A 11 HHMKVKDVCKLISLK-------PTVVEEDTPIEEIVDRILEDPVTRTVYVA--RDN-KLVGMIPVMHLLKVSGFHFFGFI 80 (157)
T ss_dssp TTCBHHHHTTSSCCC-------CEEECTTCBHHHHHHHHHHSTTCCEEEEE--ETT-EEEEEEEHHHHHHHHHHHHHCCC
T ss_pred hhhccccHhhcccCC-------CceECCCCCHHHHHHHHHhCCCCccEEEE--ECC-EEEEEEEHHHHHHHHhhhHHhhh
Confidence 346788999999998 999999999999999999999999 9999 566 999999999998765421
Q ss_pred ---------CCCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeec-Cc-eeEEEEHHHHHHHHHHh
Q 028491 126 ---------GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 126 ---------~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd-~~-~vGiit~~dll~~~~~~ 191 (208)
.......+++++|.+ ++++++++++.+|++.|.+++++++||+| ++ ++|+||..|+++.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 81 PKEELIRSSMKRLIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp C-------CCCCCSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 112356789999986 78999999999999999999999999999 45 99999999999998764
No 38
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.83 E-value=3.2e-20 Score=137.07 Aligned_cols=127 Identities=17% Similarity=0.306 Sum_probs=109.0
Q ss_pred cccccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcC----C
Q 028491 54 LENISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQG----R 127 (208)
Q Consensus 54 ~~~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~----~ 127 (208)
+...+++++|.+ + ++++++++|+.+|++.|.+++++++||+ |++++++|+|+.+|+++.+.... .
T Consensus 8 l~~~~v~~im~~~~~-------~~~v~~~~~~~~a~~~m~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~~ 78 (157)
T 2emq_A 8 FMQMTVKPFLIPADK-------VAHVQPGNYLDHALLVLTKTGYSAIPVL--DTSYKLHGLISMTMMMDAILGLERIEFE 78 (157)
T ss_dssp --CCBSTTTCEEGGG-------SCCBCTTSBHHHHHHHHHHSSSSEEEEE--CTTCCEEEEEEHHHHHHHSBCSSSBCGG
T ss_pred HhhCcHHhhccCCcc-------ceEECCCCcHHHHHHHHHHCCceEEEEE--cCCCCEEEEeeHHHHHHHHhcccccchH
Confidence 567899999997 6 8899999999999999999999999999 77899999999999887543210 0
Q ss_pred CCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhH
Q 028491 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQK 193 (208)
Q Consensus 128 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~ 193 (208)
.....+++++|.+ ++.++++++++.+|++.|.++++ +||+|+ + ++|+||..|+++.+.....
T Consensus 79 ~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 79 RLETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp GGGTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTC
T ss_pred HhcCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhh
Confidence 1246789999998 89999999999999999999987 999996 5 9999999999999987644
No 39
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.83 E-value=8.2e-21 Score=140.66 Aligned_cols=118 Identities=15% Similarity=0.367 Sum_probs=103.1
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
+...+|+++|++..+ ++++++++|+.+|++.|.+++++++||+ +++ ++++|+||.+||++++..+ ...
T Consensus 35 l~~~~v~diM~~~~~-----~~~v~~~~~i~~a~~~m~~~~~~~~pVv--d~~~~~lvGivt~~dl~~~~~~~----~~~ 103 (156)
T 3oi8_A 35 FSDLEVRDAMITRSR-----MNVLKENDSIERITAYVIDTAHSRFPVI--GEDKDEVLGILHAKDLLKYMFNP----EQF 103 (156)
T ss_dssp HTTCBGGGTCEEGGG-----CCCEETTCCHHHHHHHHHHHCCSEEEEE--SSSTTCEEEEEEGGGGGGGSSCG----GGC
T ss_pred cCCCCHhheeeeHHH-----eEEECCCCCHHHHHHHHHHCCCCEEEEE--cCCCCcEEEEEEHHHHHHHHHcC----Ccc
Confidence 667899999998311 8899999999999999999999999999 666 4999999999987653211 467
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHH
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVV 185 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll 185 (208)
+++++|.+ ++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|++
T Consensus 104 ~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 104 HLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp CHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred cHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 89999964 789999999999999999999999999986 4 99999999986
No 40
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.83 E-value=5.8e-20 Score=149.17 Aligned_cols=131 Identities=18% Similarity=0.381 Sum_probs=112.4
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhc-----CCcEEEEEecCCCceEEEeechHHHHHHHHhcCCC
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQH-----NIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~-----~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~ 128 (208)
+...+++++|++. ++++++++|+.+|++.|+++ +++++||+ |++++++|+||.+|++.+
T Consensus 134 ~~~~~v~~iM~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVv--d~~~~lvGivt~~dll~~------- 197 (286)
T 2oux_A 134 YEDETAGAIMTTE-------FVSIVANQTVRSAMYVLKNQADMAETIYYVYVV--DQENHLVGVISLRDLIVN------- 197 (286)
T ss_dssp SCTTBHHHHCBSC-------CCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEE--CTTCBEEEEEEHHHHTTS-------
T ss_pred CChHHHHHhCCCC-------ceEECCCCcHHHHHHHHHHcccCccceeEEEEE--cCCCeEEEEEEHHHHHcC-------
Confidence 5678999999998 99999999999999999987 78899999 788999999999998753
Q ss_pred CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHHHHHHHHh
Q 028491 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGELKRLNEF 202 (208)
Q Consensus 129 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~~~~~~~~ 202 (208)
....+++++|.+ +++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+.+...+...++.-+
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~~ed~~~~~g~ 271 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEAASDYSGLAGV 271 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHHHC--------
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHhHHHHHHhcCC
Confidence 346799999988 8999999999999999999999999999986 4 9999999999999988776665555433
No 41
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.81 E-value=2.3e-19 Score=145.00 Aligned_cols=131 Identities=24% Similarity=0.437 Sum_probs=107.2
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhc-----CCcEEEEEecCCCceEEEeechHHHHHHHHhcCCC
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQH-----NIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~-----~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~ 128 (208)
+...+++++|+++ ++++++++|+.+|++.|.++ +++++||+ |++++++|+||.+|++.+
T Consensus 132 ~~~~~v~~iM~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vv--d~~~~lvGivt~~dll~~------- 195 (278)
T 2yvy_A 132 YEEDEAGGLMTPE-------YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV--DEKGRLKGVLSLRDLIVA------- 195 (278)
T ss_dssp SCTTBGGGTCBSC-------CCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEE--CTTCBEEEEEEHHHHHHS-------
T ss_pred CCcchHHhhcCCC-------ceEECCCCcHHHHHHHHHHccCCccceeEEEEE--CCCCCEEEEEEHHHHhcC-------
Confidence 4567899999998 99999999999999999986 78999999 788999999999998753
Q ss_pred CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHHHHHHHHh
Q 028491 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGELKRLNEF 202 (208)
Q Consensus 129 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~~~~~~~~ 202 (208)
....+++++|.+ +++++++++++.+|++.|.+++.+.+||+|+ + ++|+||..|+++.+.+...+...++.-+
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~~ed~~~~~g~ 269 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDIHKLGAV 269 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--------------
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHhHHHHHHhcCC
Confidence 246789999987 7999999999999999999999999999986 4 9999999999999988776655554433
No 42
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.80 E-value=3.5e-19 Score=141.13 Aligned_cols=123 Identities=20% Similarity=0.289 Sum_probs=102.4
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCC-------
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS------- 128 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~------- 128 (208)
..+|+++|+++ ++++++++++.+|++.|.+++++++||+ |++|+++|+||..|+++++......
T Consensus 6 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~m~~~~~~~lpVv--d~~~~l~Giit~~di~~~~~~~~~~~~~~~~~ 76 (245)
T 3l2b_A 6 KLKVEDLEMDK-------IAPLAPEVSLKMAWNIMRDKNLKSIPVA--DGNNHLLGMLSTSNITATYMDIWDSNILAKSA 76 (245)
T ss_dssp CCBGGGSCCBC-------CCCBCTTCBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTT
T ss_pred cCcHHHhcCCC-------CcEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHhhhhhhhhhcc
Confidence 46899999988 8999999999999999999999999999 7889999999999999876532100
Q ss_pred --------------------------------------------------------------------------------
Q 028491 129 -------------------------------------------------------------------------------- 128 (208)
Q Consensus 129 -------------------------------------------------------------------------------- 128 (208)
T Consensus 77 ~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v 156 (245)
T 3l2b_A 77 TSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEI 156 (245)
T ss_dssp CCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHH
T ss_pred CCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHH
Confidence
Q ss_pred -------------------------CCccchhhhhc-cCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEE
Q 028491 129 -------------------------PKYTRVAEIMT-DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMIS 180 (208)
Q Consensus 129 -------------------------~~~~~v~~im~-~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit 180 (208)
....+++++|+ + ++.++++++++.+|++.|.+++++++||+|++ ++|+||
T Consensus 157 ~~~a~~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~--~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit 234 (245)
T 3l2b_A 157 IELAKKNNITVITTPHDSFTASRLIVQSLPVDYVMTKD--NLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIA 234 (245)
T ss_dssp HHHHHHHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCT--TCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEE
T ss_pred HHHHHHcCCeEEEeCCChHHHHHHHhcCCceeeEecCC--ccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEE
Confidence 01356889998 5 89999999999999999999999999999864 999999
Q ss_pred HHHHHHHHH
Q 028491 181 IVDVVRAVV 189 (208)
Q Consensus 181 ~~dll~~~~ 189 (208)
..|+++...
T Consensus 235 ~~dll~~~~ 243 (245)
T 3l2b_A 235 RFHLISTHK 243 (245)
T ss_dssp CC-------
T ss_pred HHHhhchhh
Confidence 999998754
No 43
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.80 E-value=2.8e-19 Score=142.34 Aligned_cols=129 Identities=13% Similarity=0.180 Sum_probs=105.9
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhc----CC--
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ----GR-- 127 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~----~~-- 127 (208)
...+.|+|+|+++ ++++.+++++.+|.++|.+++++.+|||+.+++++++|+|+..||++++... ..
T Consensus 10 ~~~~~v~diMt~~-------vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~ 82 (250)
T 2d4z_A 10 KYNIQVGDIMVRD-------VTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQP 82 (250)
T ss_dssp CSSCBTTSSSBSS-------CCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSC
T ss_pred cCCCChHHhcCCC-------CeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhh
Confidence 4578999999998 9999999999999999999999999999311246899999999998765422 00
Q ss_pred -C---------------------C--------------------------------------------------------
Q 028491 128 -S---------------------P-------------------------------------------------------- 129 (208)
Q Consensus 128 -~---------------------~-------------------------------------------------------- 129 (208)
. .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (250)
T 2d4z_A 83 AAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQ 162 (250)
T ss_dssp CCCCCBCCC-----------------------------------------------------------------------
T ss_pred hhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccc
Confidence 0 0
Q ss_pred ---------------------Cccch--h-hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHH
Q 028491 130 ---------------------KYTRV--A-EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDV 184 (208)
Q Consensus 130 ---------------------~~~~v--~-~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dl 184 (208)
...+| . .+|.+ .++++.+++++.+++.+|...|++++||++.+ ++|+||++|+
T Consensus 163 ~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl 240 (250)
T 2d4z_A 163 VASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEI 240 (250)
T ss_dssp ----CCSCCBHHHHHHHHHHHTTCBCCTTSSCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHH
T ss_pred cCcccccccChhhhhhHHHHhcCceeccccccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHH
Confidence 01122 2 25777 79999999999999999999999999999999 9999999999
Q ss_pred HHHHHHh
Q 028491 185 VRAVVEQ 191 (208)
Q Consensus 185 l~~~~~~ 191 (208)
++++.+.
T Consensus 241 ~kai~~~ 247 (250)
T 2d4z_A 241 QAAIEGS 247 (250)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9998743
No 44
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.80 E-value=6e-19 Score=144.78 Aligned_cols=128 Identities=16% Similarity=0.299 Sum_probs=111.2
Q ss_pred ccccHHHh---hcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCc
Q 028491 55 ENISVAEV---LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKY 131 (208)
Q Consensus 55 ~~~~v~~~---m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~ 131 (208)
...+++++ |.++ ++++.+++++.+|++.|.+++++++||+ |++|+++|+||.+|+++.+.........
T Consensus 185 ~~~~v~~~~~~m~~~-------~~~v~~~~~~~~~~~~m~~~~~~~~pVv--d~~~~~~Giit~~dl~~~~~~~~~~~~~ 255 (323)
T 3t4n_C 185 LKIPIGDLNIITQDN-------MKSCQMTTPVIDVIQMLTQGRVSSVPII--DENGYLINVYEAYDVLGLIKGGIYNDLS 255 (323)
T ss_dssp CCSBGGGTTCSBCTT-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEETTHHHHHHHTTHHHHTT
T ss_pred hhCcHHHcCCCCCCC-------cEEECCCCcHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEeHHHHHHHHhhchhhhcc
Confidence 34578888 8777 8999999999999999999999999999 7889999999999998865433212236
Q ss_pred cchhhhhccCC----CeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHh
Q 028491 132 TRVAEIMTDEN----KLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 132 ~~v~~im~~~~----~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~ 191 (208)
.+++++|.+.+ +++++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++++.+.
T Consensus 256 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 256 LSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp SBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred CCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 78999998743 5899999999999999999999999999995 5 99999999999999764
No 45
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.79 E-value=5.6e-19 Score=137.43 Aligned_cols=119 Identities=20% Similarity=0.317 Sum_probs=107.5
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
..+++++|.++ ++++.+++|+.+|++.|.+++++++||+ |++++++|+||.+|+++. ....+++
T Consensus 12 ~~~~~~~~~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~l~Givt~~dl~~~-------~~~~~v~ 75 (213)
T 1vr9_A 12 HMKVKKWVTQD-------FPMVEESATVRECLHRMRQYQTNECIVK--DREGHFRGVVNKEDLLDL-------DLDSSVF 75 (213)
T ss_dssp -CBGGGGCBSC-------SCEEETTCBHHHHHHHHHHTTSSEEEEE--CTTSBEEEEEEGGGGTTS-------CTTSBSG
T ss_pred ccCHHHhhcCC-------CeEECCCCcHHHHHHHHHHCCCCEEEEE--cCCCEEEEEEEHHHHHhh-------cCCCcHH
Confidence 45789999998 9999999999999999999999999999 778999999999997653 2357899
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhh
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQ 192 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~ 192 (208)
++|.+ +++++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++.+....
T Consensus 76 ~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~ 132 (213)
T 1vr9_A 76 NKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL 132 (213)
T ss_dssp GGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC
T ss_pred HHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh
Confidence 99998 8999999999999999999999999999997 5 999999999999887543
No 46
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.79 E-value=3e-19 Score=156.30 Aligned_cols=126 Identities=14% Similarity=0.232 Sum_probs=113.1
Q ss_pred CcccccHHHhhcccCCCCCCCeEEecCC-chHHHHHHHHHhcCCcEEEEEecC-CCceEEEeechHHHHHHHHhcCCCCC
Q 028491 53 GLENISVAEVLMTKGDDKVGSWLCCRSD-DTVEDAVKNMAQHNIGSLVVLKPG-EQQHIAGIFTERDYLRKIVGQGRSPK 130 (208)
Q Consensus 53 ~~~~~~v~~~m~~~~~~~~~~~~~v~~~-~tl~~a~~~m~~~~~~~~pVv~~d-~~~~~iG~vt~~dl~~~~~~~~~~~~ 130 (208)
.+...+|+++|+++ ++++.++ +|+.+|++.|.+++++++||+ | ++++++|+||.+||++++..... ..
T Consensus 380 ~l~~~~V~diM~~~-------~vtv~~~~~tv~ea~~~m~~~~~~~lpVv--d~~~g~lvGiVt~~Dll~~l~~~~~-~~ 449 (527)
T 3pc3_A 380 WWWSLAIAELELPA-------PPVILKSDATVGEAIALMKKHRVDQLPVV--DQDDGSVLGVVGQETLITQIVSMNR-QQ 449 (527)
T ss_dssp TTTTSBGGGGCCCC-------CSCCEETTCBHHHHHHHHHHHTCSEEEEE--CTTTCCEEEEEEHHHHHHHHHHHCC-CT
T ss_pred cccCCcHHHhCcCC-------CeEEcCCCCcHHHHHHHHHHcCCCeEEEE--ECCCCEEEEEEEHHHHHHHHHhccC-cC
Confidence 46678999999988 9999999 999999999999999999999 7 68999999999999988776543 35
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-----c-eeEEEEHHHHHHHHHHhh
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-----R-IVGMISIVDVVRAVVEQQ 192 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-----~-~vGiit~~dll~~~~~~~ 192 (208)
..+|+++|++ +++++++++++.+++++|.++++ +||+|+ + ++|+||..||++++.+..
T Consensus 450 ~~~V~~im~~--~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 450 SDPAIKALNK--RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp TSBGGGGEET--TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CCcHHHHhcC--CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 7899999998 89999999999999999987765 799987 7 999999999999998765
No 47
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.78 E-value=1.6e-18 Score=140.58 Aligned_cols=130 Identities=22% Similarity=0.234 Sum_probs=113.6
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCC-----CC
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGR-----SP 129 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~-----~~ 129 (208)
...+++++|.++ +.++.+++++.++++.|.+++++++||+ |++|+++|+||..|+++.+..... ..
T Consensus 154 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~~~~~~~~~ 224 (296)
T 3ddj_A 154 EIFPVKVFMSTK-------VQTIYKEVRLDQAVKLMLRRGFRRLPVI--DDDNKVVGIVTVVNAIKQLAKAVDKLDPDYF 224 (296)
T ss_dssp CCCBHHHHSBCS-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHHHHHHTCTHHH
T ss_pred ccccHHHhhcCC-------CeEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHHHhhcChhhh
Confidence 356899999988 8999999999999999999999999999 788999999999999887642100 01
Q ss_pred CccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhHHH
Q 028491 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQKGE 195 (208)
Q Consensus 130 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~~~ 195 (208)
...++.++|.+ +++++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++++.+....+
T Consensus 225 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~~~~ 290 (296)
T 3ddj_A 225 YGKVVKDVMVT--NLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHILVME 290 (296)
T ss_dssp HTCBHHHHSBC--CCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHH
T ss_pred cCcCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHhcch
Confidence 35789999998 8999999999999999999999999999994 5 999999999999998875543
No 48
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.78 E-value=3.1e-18 Score=137.34 Aligned_cols=122 Identities=17% Similarity=0.407 Sum_probs=109.9
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
..+++++|.++ ++++++++++.+|++.|.+++++++||+ |++++++|++|.+|+++.+.... ....+++
T Consensus 83 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~Givt~~dl~~~~~~~~--~~~~~v~ 151 (280)
T 3kh5_A 83 NEPVREIMEEN-------VITLKENADIDEAIETFLTKNVGGAPIV--NDENQLISLITERDVIRALLDKI--DENEVID 151 (280)
T ss_dssp TSBGGGTSBCS-------CCCEETTCBHHHHHHHHHHTTCSEEEEE--CTTCBEEEEEEHHHHHHHHGGGS--CTTCBSG
T ss_pred hhhHHHhcCCC-------CEEECCCCCHHHHHHHHHhCCCCEEEEE--cCCCEEEEEEEHHHHHHHHhhcC--CCCCCHH
Confidence 46899999988 8999999999999999999999999999 78899999999999887654332 2345899
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHH
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~ 190 (208)
++|.+ ++.++++++++.++++.|.+++++++||++++ ++|+||..|+++.+..
T Consensus 152 ~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 152 DYITR--DVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKLLGS 205 (280)
T ss_dssp GGCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHTS
T ss_pred HHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHhh
Confidence 99988 89999999999999999999999999999777 9999999999999854
No 49
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.76 E-value=3.7e-18 Score=138.45 Aligned_cols=122 Identities=23% Similarity=0.382 Sum_probs=109.5
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
..+++++|.++ ++++.+++++.+|++.|.+++++++||+ |++++++|++|.+|+++.+. .. ....+++
T Consensus 92 ~~~v~~im~~~-------~~~v~~~~~~~~a~~~m~~~~~~~lpVv--d~~~~lvGivt~~dl~~~~~-~~--~~~~~v~ 159 (296)
T 3ddj_A 92 TTPIIDYMTPN-------PVTVYNTSDEFTAINIMVTRNFGSLPVV--DINDKPVGIVTEREFLLLYK-DL--DEIFPVK 159 (296)
T ss_dssp TSBGGGTSEES-------CCCEETTSCHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHGGGGG-GS--CCCCBHH
T ss_pred cccHHHhccCC-------CEEEcCCCCHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEeHHHHHHhhh-cc--cccccHH
Confidence 56899999988 8999999999999999999999999999 78899999999999876542 22 2356999
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHh
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~ 191 (208)
++|.+ ++.++++++++.++++.|.+++++++||+|+ + ++|+||..|+++.+...
T Consensus 160 ~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 215 (296)
T 3ddj_A 160 VFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKA 215 (296)
T ss_dssp HHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred HhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 99987 8999999999999999999999999999995 4 99999999999998743
No 50
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.76 E-value=7.4e-18 Score=145.55 Aligned_cols=127 Identities=24% Similarity=0.443 Sum_probs=113.1
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhc-----CCcEEEEEecCCCceEEEeechHHHHHHHHhcCCC
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQH-----NIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS 128 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~-----~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~ 128 (208)
+...+++++|+++ ++++++++|+.+|++.|+++ +++++||+ |++++++|+|+.+|++.+
T Consensus 152 ~~~~~v~~iM~~~-------~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVv--d~~~~lvGiVt~~Dll~~------- 215 (473)
T 2zy9_A 152 YEEDEAGGLMTPE-------YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV--DEKGRLKGVLSLRDLIVA------- 215 (473)
T ss_dssp SCTTBSTTTCBSC-------EEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEE--CTTSBEEEEEEHHHHHHS-------
T ss_pred CCCCCHHHhCCCC-------ceEeCCCCcHHHHHHHHHhccCCcCceeEEEEE--CCCCcEEEEEEHHHHhcC-------
Confidence 5677899999988 99999999999999999986 57899999 778999999999998752
Q ss_pred CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHhhHHHHHH
Q 028491 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQQKGELKR 198 (208)
Q Consensus 129 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~~~~~~~~ 198 (208)
..+.+++++|++ +++++++++++.++++.|.+++.+.+||+|++ ++|+||..|+++.+.+...++..+
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e~~ed~~~ 285 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDIHK 285 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHHhhhhhhh
Confidence 346799999987 89999999999999999999999999999964 999999999999998876554444
No 51
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.75 E-value=1.1e-17 Score=137.89 Aligned_cols=129 Identities=13% Similarity=0.268 Sum_probs=109.8
Q ss_pred cccHHHh---hcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCcc
Q 028491 56 NISVAEV---LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYT 132 (208)
Q Consensus 56 ~~~v~~~---m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~ 132 (208)
..+++++ |.++ +.++++++++.+|++.|.+++++++||+ |++|+++|+||.+||++.+..........
T Consensus 181 ~~~v~~l~~~m~~~-------~~~v~~~~~~~~~~~~m~~~~~~~~~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~ 251 (334)
T 2qrd_G 181 RVPLNQMTIGTWSN-------LATASMETKVYDVIKMLAEKNISAVPIV--NSEGTLLNVYESVDVMHLIQDGDYSNLDL 251 (334)
T ss_dssp CCBGGGSSCSBCSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEETHHHHHHHTTSCGGGGGS
T ss_pred hCcHHHhCCcccCC-------ceEECCCCcHHHHHHHHHHcCCcEEEEE--cCCCcEEEEEEHHHHHHHhhccccccccC
Confidence 3567774 7776 8899999999999999999999999999 77899999999999987654332123467
Q ss_pred chhhhhccC----CCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhhH
Q 028491 133 RVAEIMTDE----NKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQK 193 (208)
Q Consensus 133 ~v~~im~~~----~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~~ 193 (208)
++.++|.+. ++++++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++.+.....
T Consensus 252 ~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~~ 318 (334)
T 2qrd_G 252 SVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDKT 318 (334)
T ss_dssp BHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCCC
T ss_pred cHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhccc
Confidence 899999831 16899999999999999999999999999995 4 9999999999999987544
No 52
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.74 E-value=4.2e-18 Score=136.92 Aligned_cols=124 Identities=23% Similarity=0.334 Sum_probs=105.5
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHH------HHHH------
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYL------RKIV------ 123 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~------~~~~------ 123 (208)
..+++++|.++ +.++++++++.++.+.|.+++++++||+ |++++++|+|+..|++ +.+-
T Consensus 125 ~~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~ 195 (282)
T 2yzq_A 125 GVEIEPYYQRY-------VSIVWEGTPLKAALKALLLSNSMALPVV--DSEGNLVGIVDETDLLRDSEIVRIMKSTELAA 195 (282)
T ss_dssp GCBSTTTSBSC-------CCCEETTSBHHHHHHHHHTCSSSEEEEE--CTTSCEEEEEEGGGGGGCGGGCC---------
T ss_pred cCcHHHHhCCC-------CEEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHhhhhhhhhhhccchhhh
Confidence 56788999877 8899999999999999999999999999 7789999999999988 4331
Q ss_pred hc-----------------CCCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHH
Q 028491 124 GQ-----------------GRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDV 184 (208)
Q Consensus 124 ~~-----------------~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dl 184 (208)
.. .......+++++|.+ +++++++++++.+|++.|.+++++++||+|++ ++|+||..|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Di 273 (282)
T 2yzq_A 196 SSEEEWILESHPTLLFEKFELQLPNKPVAEIMTR--DVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDL 273 (282)
T ss_dssp -----------------------CCCBGGGTCBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHH
T ss_pred hhhhhhhcccchHHHHhHhhhhhccCCHHHhcCC--CCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHH
Confidence 00 011246789999998 89999999999999999999999999999974 9999999999
Q ss_pred HHHHHH
Q 028491 185 VRAVVE 190 (208)
Q Consensus 185 l~~~~~ 190 (208)
++++.+
T Consensus 274 l~~~~~ 279 (282)
T 2yzq_A 274 LKVLVK 279 (282)
T ss_dssp GGGGCC
T ss_pred HHHHHh
Confidence 987753
No 53
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.72 E-value=1.2e-18 Score=155.26 Aligned_cols=126 Identities=10% Similarity=0.055 Sum_probs=105.1
Q ss_pred ccccHHHhhc--ccCCCCCCCeEEecCCchHHHHHHHHH-hcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCC---
Q 028491 55 ENISVAEVLM--TKGDDKVGSWLCCRSDDTVEDAVKNMA-QHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRS--- 128 (208)
Q Consensus 55 ~~~~v~~~m~--~~~~~~~~~~~~v~~~~tl~~a~~~m~-~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~--- 128 (208)
...+|+|+|+ ++ ++++++++|+.|+.+.|. +++++.+||+ |++++++|+|+.+||++.+..+...
T Consensus 451 ~~~~V~diM~p~~~-------v~~v~~~~t~~e~~~~~~~~~~~~~~PVv--d~~~~lvGiVt~~DL~~~l~~~~~~~~~ 521 (632)
T 3org_A 451 PEMTAREIMHPIEG-------EPHLFPDSEPQHIKGILEKFPNRLVFPVI--DANGYLLGAISRKEIVDRLQHVLEDVPE 521 (632)
T ss_dssp TTSBHHHHCBCTTT-------SCCBCSSSCHHHHHHHHHHSTTCCEECBB--CTTCBBCCEESHHHHTTTTTTC------
T ss_pred ccCcHHHHhhcCCC-------ceEecCCCcHHHHHHHHHhcCCcceEEEE--ecCCeEEEEEEHHHHHHHHHHHhhhccc
Confidence 5789999999 55 899999999999999999 7999999999 7789999999999988754322100
Q ss_pred -------------------------------------------CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCC
Q 028491 129 -------------------------------------------PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHI 165 (208)
Q Consensus 129 -------------------------------------------~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~ 165 (208)
.+..+++++|++ +++++++++++.+|++.|.++++
T Consensus 522 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i 599 (632)
T 3org_A 522 PIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMP 599 (632)
T ss_dssp -------------------------------------------------CCSCCC--CCCEEETTCBHHHHHHHHHHTCC
T ss_pred ccccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcC--CCceecCCCcHHHHHHHHHhcCC
Confidence 001137889998 89999999999999999999999
Q ss_pred CEeeeecCc-eeEEEEHHHHHHHHHHh
Q 028491 166 RHVPVIDGR-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 166 ~~lpVvd~~-~vGiit~~dll~~~~~~ 191 (208)
+++||++++ ++|+||++|+++.+.+.
T Consensus 600 ~~lpVve~G~lvGIVT~~Dll~~~~~~ 626 (632)
T 3org_A 600 SMIYVTERGKLVGIVEREDVAYGYSNS 626 (632)
T ss_dssp SEEEEEETTEEEEEEEGGGTEECCCC-
T ss_pred CEEEEEECCEEEEEEehhhHHHHHhhh
Confidence 999999777 99999999998876543
No 54
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.71 E-value=3.9e-18 Score=137.09 Aligned_cols=116 Identities=17% Similarity=0.303 Sum_probs=86.9
Q ss_pred ccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhh
Q 028491 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136 (208)
Q Consensus 57 ~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~ 136 (208)
++++++|.++ ++++++++|+.+|++.|.+++++++||+ +++|+++|+++..|++..+ ...++++
T Consensus 1 m~v~~im~~~-------~~~v~~~~~~~~a~~~~~~~~~~~~pV~--d~~~~~~Giv~~~dl~~~~-------~~~~v~~ 64 (282)
T 2yzq_A 1 MRVKTIMTQN-------PVTITLPATRNYALELFKKYKVRSFPVV--NKEGKLVGIISVKRILVNP-------DEEQLAM 64 (282)
T ss_dssp CBHHHHSEES-------CCCEESSCC------------CCEEEEE--CTTCCEEEEEESSCC-----------------C
T ss_pred CchHHhccCC-------CeEECCCCcHHHHHHHHHHcCCCeEEEE--cCCCcEEEEEEHHHHHhhh-------ccCCHHH
Confidence 4689999988 8999999999999999999999999999 6789999999999987642 3578999
Q ss_pred hhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHH-HHHH
Q 028491 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVR-AVVE 190 (208)
Q Consensus 137 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~-~~~~ 190 (208)
+|.+ ++.++++++++.+|++.|.+++.+.+||+|++ ++|+||..|+++ .+.+
T Consensus 65 ~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 65 LVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp CCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT
T ss_pred HcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhc
Confidence 9988 78999999999999999999999999999974 999999999998 6653
No 55
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.71 E-value=4.4e-17 Score=130.59 Aligned_cols=114 Identities=24% Similarity=0.417 Sum_probs=98.9
Q ss_pred eEEecCCchHHHHHHHHHhcCCcEEEEEecCC-CceEEEeechHHHHHHHHhc--------CCC-----CCccchhhhhc
Q 028491 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE-QQHIAGIFTERDYLRKIVGQ--------GRS-----PKYTRVAEIMT 139 (208)
Q Consensus 74 ~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~-~~~~iG~vt~~dl~~~~~~~--------~~~-----~~~~~v~~im~ 139 (208)
++++++++|+.+|++.|.+++++++||+ ++ +++++|++|.+||++.+... ... ....+++++|.
T Consensus 14 ~~~v~~~~sl~~a~~~m~~~~~~~lpV~--d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 91 (280)
T 3kh5_A 14 IVTVYPTTTIRKALMTMNENKYRRLPVV--NAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIME 91 (280)
T ss_dssp CCCBCTTSBHHHHHHHHHHHCCCEEEEE--CTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSB
T ss_pred cEEECCCCcHHHHHHHHHhCCCcEeeEE--ECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcC
Confidence 8999999999999999999999999999 65 79999999999998754111 000 11468999999
Q ss_pred cCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHh
Q 028491 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 140 ~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~ 191 (208)
+ ++.++++++++.+|++.|.+++++++||+|++ ++|++|..|+++.+...
T Consensus 92 ~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 143 (280)
T 3kh5_A 92 E--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDK 143 (280)
T ss_dssp C--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG
T ss_pred C--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc
Confidence 8 89999999999999999999999999999864 99999999999987654
No 56
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.70 E-value=8.3e-17 Score=132.44 Aligned_cols=115 Identities=16% Similarity=0.280 Sum_probs=101.2
Q ss_pred eEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhhhhc------cCCCeEEE
Q 028491 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT------DENKLITL 147 (208)
Q Consensus 74 ~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~im~------~~~~~~~v 147 (208)
+.++.+++++.++.+.|.+++++++||+ |++|+++|+||..|+++.+..........+++++|. + +++++
T Consensus 203 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~v 278 (330)
T 2v8q_E 203 IAMVRTTTPVYVALGIFVQHRVSALPVV--DEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLKC 278 (330)
T ss_dssp CCCEETTCBHHHHHHHHHHHCCSEEEEE--CTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCC--SCCEE
T ss_pred ceEECCCCCHHHHHHHHHHcCCCeEEEE--CCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccccccC--CCeEE
Confidence 8899999999999999999999999999 778999999999998876543322223678999984 4 79999
Q ss_pred cCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhh
Q 028491 148 PSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQ 192 (208)
Q Consensus 148 ~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~ 192 (208)
++++++.+|++.|.+++++++||+|+ + ++|+||..|+++++.+..
T Consensus 279 ~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~~ 325 (330)
T 2v8q_E 279 YLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLTG 325 (330)
T ss_dssp CTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSSC
T ss_pred CCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhhc
Confidence 99999999999999999999999997 5 999999999999987653
No 57
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.68 E-value=1e-16 Score=131.46 Aligned_cols=128 Identities=12% Similarity=0.214 Sum_probs=106.5
Q ss_pred eEEecCCchHHHHHHHHHhcCCcEEEEEecCCCce-----EEEeechHHHHHHHHhcC--CCCCccchhhh---hccCCC
Q 028491 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQH-----IAGIFTERDYLRKIVGQG--RSPKYTRVAEI---MTDENK 143 (208)
Q Consensus 74 ~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~-----~iG~vt~~dl~~~~~~~~--~~~~~~~v~~i---m~~~~~ 143 (208)
++++++++++.+|++.|.+++++++||+ |+++. ++|+||.+|+++.+.... ......+++++ |.+ +
T Consensus 124 ~v~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~--~ 199 (323)
T 3t4n_C 124 TASIHPSRPLFEACLKMLESRSGRIPLI--DQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQD--N 199 (323)
T ss_dssp CCCBCTTSBHHHHHHHHHHHTCSEEEEE--EECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCT--T
T ss_pred ceEeCCCCcHHHHHHHHHhCCeeEEEEE--ecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCC--C
Confidence 8999999999999999999999999999 55554 999999999998765432 11335689999 877 8
Q ss_pred eEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHhhH-HHHHHHHHhhhc
Q 028491 144 LITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQQK-GELKRLNEFIRG 205 (208)
Q Consensus 144 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~~~-~~~~~~~~~~~~ 205 (208)
++++++++++.+|++.|.+++++++||+|++ ++|+||..|+++.+..... .....+++++..
T Consensus 200 ~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~ 264 (323)
T 3t4n_C 200 MKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMR 264 (323)
T ss_dssp CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGG
T ss_pred cEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhh
Confidence 9999999999999999999999999999864 9999999999999876542 223356666654
No 58
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.65 E-value=9.7e-16 Score=126.04 Aligned_cols=128 Identities=12% Similarity=0.204 Sum_probs=105.7
Q ss_pred CcccccHHHhh--cccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC-ceEEEeechHHHHHHHHhcC---
Q 028491 53 GLENISVAEVL--MTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ-QHIAGIFTERDYLRKIVGQG--- 126 (208)
Q Consensus 53 ~~~~~~v~~~m--~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~-~~~iG~vt~~dl~~~~~~~~--- 126 (208)
.+...+++++| .++ ++++++++|+.+|++.|.+++++++||+ +++ ++++|+|+.+|++..+....
T Consensus 31 ~l~~~~v~dim~p~~~-------v~~v~~~~~v~~a~~~~~~~~~~~~pV~--d~~~~~~vGivt~~Dll~~l~~~~~~~ 101 (330)
T 2v8q_E 31 FMKSHRCYDLIPTSSK-------LVVFDTSLQVKKAFFALVTNGVRAAPLW--DSKKQSFVGMLTITDFINILHRYYKSA 101 (330)
T ss_dssp HHHHSBGGGGSCSEEE-------EEEEETTSBHHHHHHHHHHHTCSEEEEE--ETTTTEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHcCcHhhhccCCCc-------EEEEeCCCcHHHHHHHHHHcCCcEEEEE--eCCCCeEEEEEEHHHHHHHHHHHHhcc
Confidence 35678999999 555 9999999999999999999999999999 555 79999999999987654311
Q ss_pred ----CCCCccch-------hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC--c-eeEEEEHHHHHHHHHHh
Q 028491 127 ----RSPKYTRV-------AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 127 ----~~~~~~~v-------~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~-~vGiit~~dll~~~~~~ 191 (208)
......++ +++|.+ +++++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++++...
T Consensus 102 ~~~~~~l~~~~~~~~~~~~~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~ 178 (330)
T 2v8q_E 102 LVQIYELEEHKIETWREVYLQDSFK--PLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLF 178 (330)
T ss_dssp TTTCCCGGGCBHHHHHHHHSSSSCC--CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHH
T ss_pred ccchhHHhhccHHHHHHHHhhcccC--CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHH
Confidence 00011223 355777 8999999999999999999999999999995 5 99999999999988653
No 59
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.64 E-value=7.7e-16 Score=133.89 Aligned_cols=122 Identities=22% Similarity=0.388 Sum_probs=103.2
Q ss_pred HHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCC--CceEEEeechHHHHHHHHhcCCCCCccchhh
Q 028491 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE--QQHIAGIFTERDYLRKIVGQGRSPKYTRVAE 136 (208)
Q Consensus 59 v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~--~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~ 136 (208)
+.++|.... ....+++++++++|+.++.++|.+++++++||+ |+ +++++|+||.+||+. . .....++++
T Consensus 109 V~~V~~~~~-~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVv--d~g~~~~lvGiVt~rDl~~----~--~~~~~~V~~ 179 (511)
T 3usb_A 109 VDKVKRSES-GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVV--NNLDERKLVGIITNRDMRF----I--QDYSIKISD 179 (511)
T ss_dssp HHHHHTSSS-CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEE--SCTTTCBEEEEEEHHHHTT----C--CCSSSBHHH
T ss_pred HHHhhcccc-ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEE--ecCCCCEEEEEEEehHhhh----h--ccCCCcHHH
Confidence 556665420 001238899999999999999999999999999 66 789999999999753 1 235789999
Q ss_pred hhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHH
Q 028491 137 IMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVE 190 (208)
Q Consensus 137 im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~ 190 (208)
+|++ ++++++++++++.++++.|.+++++.+||+|++ ++|+||.+|+++.+..
T Consensus 180 vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 180 VMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp HCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred hccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 9985 368999999999999999999999999999976 9999999999999865
No 60
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.61 E-value=2e-16 Score=137.09 Aligned_cols=116 Identities=22% Similarity=0.317 Sum_probs=88.7
Q ss_pred HHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhhhh
Q 028491 59 VAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIM 138 (208)
Q Consensus 59 v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~im 138 (208)
++++|.++ ++++++++|+.++.++|.+++++.+||+ |++++++|+||.+||+. . .....+++++|
T Consensus 91 ~~~~m~~d-------~v~v~~~~tv~ea~~~m~~~~~s~~PVv--d~~~~lvGiVt~rDL~~----~--~~~~~~v~diM 155 (496)
T 4fxs_A 91 FEAGVVTH-------PVTVRPEQTIADVMELTHYHGFAGFPVV--TENNELVGIITGRDVRF----V--TDLTKSVAAVM 155 (496)
T ss_dssp CCC--CBC-------CCCBCSSSBHHHHHHHHTSSCCCEEEEE--CSSSBEEEEEEHHHHTT----C--CCTTSBGGGTS
T ss_pred cccccccC-------ceEECCCCCHHHHHHHHHHcCCcEEEEE--ccCCEEEEEEEHHHHhh----c--ccCCCcHHHHh
Confidence 35578777 9999999999999999999999999999 77899999999999752 1 23467899999
Q ss_pred ccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHH
Q 028491 139 TDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVV 189 (208)
Q Consensus 139 ~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~ 189 (208)
++.++++++++++++.++++.|.+++++.+||+|++ ++|+||.+|+++...
T Consensus 156 ~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 156 TPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp EEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred cCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 932248999999999999999999999999999976 999999999998753
No 61
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.58 E-value=1.3e-14 Score=125.90 Aligned_cols=117 Identities=20% Similarity=0.350 Sum_probs=104.5
Q ss_pred cHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecC--CCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPG--EQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 58 ~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d--~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
+++++|.++ ++++++++|+.++++.|.+++++.+||+ | ++++++|+|+.+||+.. . ....+++
T Consensus 91 ~~~~im~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~~lvGivt~~Dl~~~----~--~~~~~v~ 155 (491)
T 1zfj_A 91 RSENGVIID-------PFFLTPEHKVSEAEELMQRYRISGVPIV--ETLANRKLVGIITNRDMRFI----S--DYNAPIS 155 (491)
T ss_dssp HHTTTTSSS-------CCCBCSSSBHHHHHHHHHHTTCSEEEEE--SCTTTCBEEEEEEHHHHHHC----S--CSSSBTT
T ss_pred hHHhcCcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--EeCCCCEEEEEEEHHHHhhh----c--cCCCcHH
Confidence 457889887 8999999999999999999999999999 7 78999999999998752 1 2467899
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHH
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVE 190 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~ 190 (208)
++|++. +++++++++++.++++.|.+++++.+||+|++ ++|+||..|+++.+..
T Consensus 156 ~im~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 156 EHMTSE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp TSCCCS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHcCCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 999842 47899999999999999999999999999975 9999999999999874
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.58 E-value=8e-15 Score=120.65 Aligned_cols=126 Identities=13% Similarity=0.232 Sum_probs=101.9
Q ss_pred EEecCCchHHHHHHHHHhcCCcEEEEEecCCCc-e----EEEeechHHHHHHHHhcCC--CCCccchhh---hhccCCCe
Q 028491 75 LCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQ-H----IAGIFTERDYLRKIVGQGR--SPKYTRVAE---IMTDENKL 144 (208)
Q Consensus 75 ~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~-~----~iG~vt~~dl~~~~~~~~~--~~~~~~v~~---im~~~~~~ 144 (208)
+++.+++++.++++.|.+++.+++||+ |+++ + ++|+||.+|+++.+..+.. .....++++ +|.+ ++
T Consensus 120 ~~v~~~~~~~~a~~~~~~~~~~~~~Vv--d~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~--~~ 195 (334)
T 2qrd_G 120 IYVHPMHSLMDACLAMSKSRARRIPLI--DVDGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMTIGTWS--NL 195 (334)
T ss_dssp CCBCTTSBHHHHHHHHHHSCCSEEEEE--EEETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCS--SC
T ss_pred eeeCCCCcHHHHHHHHHHCCceEEEEE--eCCCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhCCcccC--Cc
Confidence 899999999999999999999999999 4544 3 9999999999887654211 112467888 4777 89
Q ss_pred EEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHhh-HHHHHHHHHhhh
Q 028491 145 ITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQQ-KGELKRLNEFIR 204 (208)
Q Consensus 145 ~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~~-~~~~~~~~~~~~ 204 (208)
.++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++.+.... ......+++++.
T Consensus 196 ~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~ 258 (334)
T 2qrd_G 196 ATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALL 258 (334)
T ss_dssp CCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHT
T ss_pred eEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHh
Confidence 99999999999999999999999999986 4 999999999999886542 122234555554
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.56 E-value=1.5e-16 Score=137.70 Aligned_cols=116 Identities=19% Similarity=0.282 Sum_probs=2.4
Q ss_pred cHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhhh
Q 028491 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137 (208)
Q Consensus 58 ~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~i 137 (208)
+++++|.++ ++++++++|+.++.++|.+++++.+||+ | +++++|+||.+||... .....+++++
T Consensus 89 ~~~~~m~~~-------~v~v~~~~tv~ea~~~m~~~~~s~~pVv--d-~g~lvGIVt~rDl~~~------~~~~~~V~~v 152 (490)
T 4avf_A 89 KHETAIVRD-------PVTVTPSTKIIELLQMAREYGFSGFPVV--E-QGELVGIVTGRDLRVK------PNAGDTVAAI 152 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcccC-------ceEeCCCCcHHHHHHHHHHhCCCEEEEE--E-CCEEEEEEEhHHhhhc------cccCCcHHHH
Confidence 456778877 8999999999999999999999999999 6 7899999999997532 1346789999
Q ss_pred hccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHH
Q 028491 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVV 189 (208)
Q Consensus 138 m~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~ 189 (208)
|++..+++++++++++.+|+++|.+++++.+||+|++ ++|+||.+|+++...
T Consensus 153 Mtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 153 MTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ------------------------------------------------------
T ss_pred hccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 9832248999999999999999999999999999976 999999999999864
No 64
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.56 E-value=2.6e-16 Score=136.82 Aligned_cols=115 Identities=22% Similarity=0.316 Sum_probs=0.4
Q ss_pred hcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCC---ceEEEeechHHHHHHHHhcCCCCCccchhhhhc
Q 028491 63 LMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQ---QHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139 (208)
Q Consensus 63 m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~---~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~im~ 139 (208)
|.++ ++++++++|+.++++.|.+++++.+||+ |++ ++++|+||.+||+.. . .....+++++|+
T Consensus 103 M~~~-------~~~v~~~~tv~eal~~m~~~~~s~~pVv--d~~~~~g~lvGiVt~~Dl~~~---~--~~~~~~V~diM~ 168 (503)
T 1me8_A 103 FVVS-------DSNVKPDQTFADVLAISQRTTHNTVAVT--DDGTPHGVLLGLVTQRDYPID---L--TQTETKVSDMMT 168 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccC-------CeEECCCCcHHHHHHHHHHcCceEEEEE--ECCCcCCeEEEEEEHHHHHhh---h--ccccCcHHHHhC
Confidence 8877 9999999999999999999999999999 666 899999999998753 1 234678999999
Q ss_pred cCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHh
Q 028491 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 140 ~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~ 191 (208)
+..+++++++++++.+|++.|.+++++.+||+|++ ++|+||.+|+++.+...
T Consensus 169 ~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 169 PFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp -----------------------------------------------------C
T ss_pred CCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 82229999999999999999999999999999976 99999999999988643
No 65
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.55 E-value=3.3e-16 Score=136.04 Aligned_cols=119 Identities=25% Similarity=0.468 Sum_probs=7.3
Q ss_pred cHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhhh
Q 028491 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEI 137 (208)
Q Consensus 58 ~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~i 137 (208)
+++++|.++ ++++++++|+.+|++.|.+++++.+||+ |++++++|+||.+||+.. . ....+++++
T Consensus 96 ~~~~iM~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~lvGivt~~Dl~~~---~---~~~~~v~~i 160 (494)
T 1vrd_A 96 KTENGIIYD-------PITVTPDMTVKEAIDLMAEYKIGGLPVV--DEEGRLVGLLTNRDVRFE---K---NLSKKIKDL 160 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccC-------CeEECCCCCHHHHHHHHHHcCceEEEEE--cCCCEEEEEEEHHHHHhh---c---CCCCcHHHH
Confidence 457788887 9999999999999999999999999999 778999999999998752 1 246789999
Q ss_pred hccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHh
Q 028491 138 MTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 138 m~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~ 191 (208)
|++.++++++++++++.++++.|.+++++.+||+|++ ++|+||..|+++.+...
T Consensus 161 m~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 161 MTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ------------------------------------------------CHHHHTCT
T ss_pred hCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 9853358899999999999999999999999999976 99999999999998654
No 66
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.52 E-value=7.4e-16 Score=132.04 Aligned_cols=107 Identities=22% Similarity=0.369 Sum_probs=0.0
Q ss_pred eEEecCCchHHHHHHHHHhcCCcEEEEEecC-CCceEEEeechHHHHHHHHhcCCCCCccchhhhhccCCCeEEEcCCCC
Q 028491 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPG-EQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDAN 152 (208)
Q Consensus 74 ~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d-~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~ 152 (208)
+++++|+.|+.||.++|.+++++.+||++.+ .+++++|+||.+|+... ..+.+|+++|++ ++++++.+.+
T Consensus 148 Pvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~-------d~~~~V~evMT~--~lvt~~~~~~ 218 (556)
T 4af0_A 148 PLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ-------DAETPIKSVMTT--EVVTGSSPIT 218 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-------ccceEhhhhccc--ceEEecCCCC
Confidence 8999999999999999999999999999311 15799999999996431 346899999998 8999999999
Q ss_pred HHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHH
Q 028491 153 ILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVV 189 (208)
Q Consensus 153 l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~ 189 (208)
+.+|.++|.++++..+||+|++ ++|+||++|+++...
T Consensus 219 leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 219 LEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 9999999999999999999987 999999999998764
No 67
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.50 E-value=3.3e-14 Score=91.05 Aligned_cols=69 Identities=36% Similarity=0.605 Sum_probs=61.2
Q ss_pred eEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhhhhccCCCeEEE
Q 028491 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLITL 147 (208)
Q Consensus 74 ~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~~~v 147 (208)
++++++++|+.+|+++|.+++++++||+ + +++++|+||.+||++++..++....+.+++++|++ +++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~--d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~--~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVM--E-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK--NPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEE--E-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEE--CTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEE--E-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCC--CCeEC
Confidence 7899999999999999999999999999 3 58999999999998888777766667899999998 66653
No 68
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.41 E-value=1.4e-14 Score=125.50 Aligned_cols=110 Identities=29% Similarity=0.521 Sum_probs=1.0
Q ss_pred HHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhhhhc
Q 028491 60 AEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMT 139 (208)
Q Consensus 60 ~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~im~ 139 (208)
++.|..+ ++++++++|+.++.+.|.+++++.+||+ ++ ++++|+|+.+||+. ....+++++|.
T Consensus 96 ~~~m~~~-------~~~v~~~~tv~ea~~~~~~~~~~~~pVv--d~-~~lvGivt~~Dl~~--------~~~~~v~~im~ 157 (486)
T 2cu0_A 96 ERLIVED-------VITIAPDETVDFALFLMEKHGIDGLPVV--ED-EKVVGIITKKDIAA--------REGKLVKELMT 157 (486)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred hhccccC-------ceEECCCCCHHHHHHHHHHcCCcEEEEE--EC-CEEEEEEEHHHhcc--------CCCCCHHHHcc
Confidence 4567766 8999999999999999999999999999 56 99999999999764 13678999999
Q ss_pred cCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHH
Q 028491 140 DENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVV 189 (208)
Q Consensus 140 ~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~ 189 (208)
+ +++++++++++.++++.|.+++++.+||+|++ ++|+||..|+++...
T Consensus 158 ~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 158 K--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ---------------------------------------------------C
T ss_pred C--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 7 79999999999999999999999999999965 999999999999875
No 69
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.37 E-value=4.7e-15 Score=129.35 Aligned_cols=119 Identities=18% Similarity=0.302 Sum_probs=67.0
Q ss_pred cHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCC---CceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGE---QQHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 58 ~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~---~~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
+++++|.++ ++++.+++|+.+|.++|.+++++.+||+ |+ +++++|+||.+|+... . . .....++
T Consensus 109 ~~~~im~~~-------~~~v~~~~tv~ea~~~m~~~~~~~~pVv--d~~~~~~~lvGiVt~~Dl~~~-~-~--~~~~~~v 175 (514)
T 1jcn_A 109 NFEQGFITD-------PVVLSPSHTVGDVLEAKMRHGFSGIPIT--ETGTMGSKLVGIVTSRDIDFL-A-E--KDHTTLL 175 (514)
T ss_dssp TCCTTSCSS-------CCCCCC-----------------CEESC--C--------CCEECTTTTC---------------
T ss_pred hhhhccccC-------CEEECCCCCHHHHHHHHHhcCCCEEEEE--eCCCcCCEEEEEEEHHHHHhh-h-h--ccCCCCH
Confidence 455777776 8899999999999999999999999999 66 5899999999997652 1 1 1246789
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHH
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVV 189 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~ 189 (208)
+++|++..+++++++++++.++++.|.+++++.+||+|++ ++|+||+.|+++.+.
T Consensus 176 ~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 176 SEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp -----CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred HHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 9999852258899999999999999999999999999865 999999999988764
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.26 E-value=8.8e-12 Score=79.15 Aligned_cols=68 Identities=37% Similarity=0.601 Sum_probs=58.1
Q ss_pred eEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchhhhhccCCCeEE
Q 028491 74 WLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVAEIMTDENKLIT 146 (208)
Q Consensus 74 ~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~~~ 146 (208)
++++++++++.+|++.|.+++++++||+ |+ ++++|+||.+||++++...+......+++++|++ ++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~--d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVM--EG-DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK--NPVK 69 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEE--ET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEE--CTTC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCC--CCeE
Confidence 6889999999999999999999999999 55 9999999999999876655443457889999987 5543
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.06 E-value=1.5e-10 Score=89.58 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=55.3
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
..+++++|.++ ++++++++++.+|++.|.+++++.+||+ |++|+++|+||.+|+++.+.... .+.
T Consensus 71 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGiit~~Dil~~~~~~~------~~~ 135 (213)
T 1vr9_A 71 DSSVFNKVSLP-------DFFVHEEDNITHALLLFLEHQEPYLPVV--DEEMRLKGAVSLHDFLEALIEAL------AMD 135 (213)
T ss_dssp TSBSGGGCBCT-------TCCEETTSBHHHHHHHHHHCCCSEEEEE--CTTCBEEEEEEHHHHHHHHHHSC------C--
T ss_pred CCcHHHHccCC-------CEEECCCCcHHHHHHHHHHhCCCEEEEE--cCCCEEEEEEEHHHHHHHHHHHh------cCC
Confidence 45799999988 8999999999999999999999999999 77799999999999998764322 123
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeec
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID 172 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd 172 (208)
+.+..- .+.+.....++.++.+.|.+++++.++|..
T Consensus 136 ~~~~~l-~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 136 VPGIRF-SVLLEDKPGELRKVVDALALSNINILSVIT 171 (213)
T ss_dssp -------------------------------------
T ss_pred CCcEEE-EEEeCCCCccHHHHHHHHHHCCCcEEEEEE
Confidence 333320 111123445699999999999999999874
No 72
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.94 E-value=2.5e-09 Score=68.10 Aligned_cols=62 Identities=16% Similarity=0.351 Sum_probs=50.3
Q ss_pred eEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHhhH-HHHHHHHHhhhc
Q 028491 144 LITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQK-GELKRLNEFIRG 205 (208)
Q Consensus 144 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~~~-~~~~~~~~~~~~ 205 (208)
++++++++++.+|+++|.+++++++||+|++ ++|+||..|+++.+..... ....+++++|..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~ 65 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK 65 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCC
Confidence 6899999999999999999999999999998 9999999999987654322 223345566543
No 73
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.93 E-value=1.5e-09 Score=77.27 Aligned_cols=74 Identities=11% Similarity=0.187 Sum_probs=60.2
Q ss_pred cchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC--c-eeEEEEHHHHHHHHHHhhHHHHHHHHHhhhc
Q 028491 132 TRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--R-IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205 (208)
Q Consensus 132 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~-~vGiit~~dll~~~~~~~~~~~~~~~~~~~~ 205 (208)
.+++++|++.++++++++++++.+|++.|.+++++++||+++ + ++|+||..|+++.+..........++++++.
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m~~ 78 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADE 78 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHSBC
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhccC
Confidence 578999975436899999999999999999999999999965 4 9999999999999875432234456666644
No 74
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.92 E-value=3.2e-09 Score=76.95 Aligned_cols=64 Identities=14% Similarity=0.331 Sum_probs=57.3
Q ss_pred CCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC--c-eeEEEEHHHHHHHHHHh
Q 028491 128 SPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 128 ~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~-~vGiit~~dll~~~~~~ 191 (208)
.....+++++|+++.++.++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++.+...
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC
Confidence 3457899999987557899999999999999999999999999987 6 99999999999987654
No 75
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.90 E-value=1.5e-09 Score=68.55 Aligned_cols=64 Identities=17% Similarity=0.362 Sum_probs=52.6
Q ss_pred CeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHhhH-HHHHHHHHhhhcC
Q 028491 143 KLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQK-GELKRLNEFIRGE 206 (208)
Q Consensus 143 ~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~~~-~~~~~~~~~~~~~ 206 (208)
++.++++++++.+|++.|.+++++.+||+|++ ++|+||..|+++.+..... .....++++|..+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~ 66 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKN 66 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEEC
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCC
Confidence 36789999999999999999999999999989 9999999999998765432 2334566666543
No 76
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.82 E-value=2.8e-09 Score=79.27 Aligned_cols=57 Identities=25% Similarity=0.476 Sum_probs=52.8
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHH
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVV 189 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~ 189 (208)
+.+|+++|++ +++++++++++.+|++.|.+++++.+||+|++ ++|+||..|+++.+.
T Consensus 17 ~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~ 75 (170)
T 4esy_A 17 QVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSI 75 (170)
T ss_dssp TSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTC
T ss_pred CCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHh
Confidence 5789999998 89999999999999999999999999999876 999999999987653
No 77
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.80 E-value=1e-08 Score=75.35 Aligned_cols=61 Identities=25% Similarity=0.370 Sum_probs=55.3
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHh
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~ 191 (208)
..+++++|+++.++.++++++++.+|+..|.+++++++||+|++ ++|+||..|+++++...
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~ 76 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEH 76 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHH
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhc
Confidence 35789999987789999999999999999999999999999875 99999999999988764
No 78
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.78 E-value=6.6e-09 Score=72.75 Aligned_cols=70 Identities=19% Similarity=0.269 Sum_probs=57.0
Q ss_pred chhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHHHHHHHhhHHHHHHHHHhhh
Q 028491 133 RVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204 (208)
Q Consensus 133 ~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll~~~~~~~~~~~~~~~~~~~ 204 (208)
+++++|.+ ++.++++++++.+|++.|.+++.+.+||+|++ ++|+||..|+++.+..........+.+++.
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~ 72 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVME 72 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCB
T ss_pred CHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcCCcccccCHHHHcC
Confidence 68899998 89999999999999999999999999999966 999999999998876532212233444443
No 79
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.76 E-value=2e-08 Score=71.08 Aligned_cols=58 Identities=16% Similarity=0.272 Sum_probs=53.0
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
..+++++|. + +.++++++++.+|++.|.+++...+||+ |++|+++|+||..|+++++.
T Consensus 71 ~~~v~~~m~-~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 71 QKQLGAVMR-P-------IQVVLNNTALPKVFDQMMTHRLQLALVV--DEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TSBHHHHSE-E-------CCEEETTSCHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHHHHH
T ss_pred cCCHHHHhc-C-------CcCcCCCCcHHHHHHHHHHcCCeEEEEE--cCCCCEEEEEEHHHHHHHHc
Confidence 568999994 4 6899999999999999999999999999 88899999999999998765
No 80
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.74 E-value=2e-08 Score=70.80 Aligned_cols=59 Identities=25% Similarity=0.341 Sum_probs=52.4
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
...+++++|.+ +.++++++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 67 ~~~~v~~~m~~--------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 67 EAFSMDKVLRT--------AVVVPESKRVDRMLKEFRSQRYHMAIVI--DEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp CCCCHHHHCBC--------CCEEETTCBHHHHHHHHHHTTCCEEEEE--CTTSCEEEEEEHHHHHHHC-
T ss_pred CCCCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHh
Confidence 46789999954 5789999999999999999999999999 88999999999999988653
No 81
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.74 E-value=2.7e-08 Score=72.64 Aligned_cols=75 Identities=13% Similarity=0.318 Sum_probs=58.2
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
...+++++|.++ +.++.+++++.+|++.|.+++++.+||+ | +|+++|+||..||++++..... .....+
T Consensus 76 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d-~g~~~Giit~~dil~~l~~~~~-~~~~~~ 144 (157)
T 4fry_A 76 KATRVEEIMTAK-------VRYVEPSQSTDECMALMTEHRMRHLPVL--D-GGKLIGLISIGDLVKSVIADQQ-FTISQL 144 (157)
T ss_dssp SSCBHHHHSBSS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHTTCC-CCCC--
T ss_pred cccCHHHHcCCC-------CcEECCCCcHHHHHHHHHHcCCCEEEEE--E-CCEEEEEEEHHHHHHHHHHHHH-hhHHHH
Confidence 467899999988 8999999999999999999999999999 6 6999999999999988765543 234456
Q ss_pred hhhhcc
Q 028491 135 AEIMTD 140 (208)
Q Consensus 135 ~~im~~ 140 (208)
++++..
T Consensus 145 ~~~i~~ 150 (157)
T 4fry_A 145 EHYIHG 150 (157)
T ss_dssp ------
T ss_pred HhhccC
Confidence 666554
No 82
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.74 E-value=2.3e-08 Score=72.17 Aligned_cols=60 Identities=20% Similarity=0.300 Sum_probs=55.6
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
..+++++|.++ +.++++++++.+|++.|.+++.+.+||+ |++|+++|+||..||++.+..
T Consensus 84 ~~~v~~~m~~~-------~~~v~~~~~l~~a~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 84 GKLVGDLMTPA-------PLVVEEKTNLEDAAKILLETKYRRLPVV--DSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp CCBHHHHSEES-------CCCEESSSBHHHHHHHHHHSSCCEEEEE--CTTSBEEEEEEHHHHHHHHHC
T ss_pred cccHHHhcCCC-------ceEECCCCcHHHHHHHHHHCCCCEEEEE--CCCCcEEEEEEHHHHHHHHHh
Confidence 56899999998 8899999999999999999999999999 788999999999999987654
No 83
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.74 E-value=1.7e-08 Score=75.15 Aligned_cols=63 Identities=13% Similarity=0.247 Sum_probs=53.5
Q ss_pred CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC--c-eeEEEEHHHHHHHHHHh
Q 028491 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 129 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~-~vGiit~~dll~~~~~~ 191 (208)
....+++++|++.++++++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+...
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 104 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG 104 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc
Confidence 456789999994337899999999999999999999999999987 6 99999999999988643
No 84
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.73 E-value=2.6e-08 Score=72.61 Aligned_cols=59 Identities=19% Similarity=0.422 Sum_probs=54.1
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
..+++++| ++ +.++++++++.+|++.|.+++...+||+ |++|+++|+||..|+++.+..
T Consensus 85 ~~~v~~~m-~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 85 KAKISTIM-RD-------IVSVPENMKVPDVMEEMSAHRVPMAIVI--DEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSBGGGTC-BC-------CEEEETTSBHHHHHHHHHHTTCSCEEEE--CTTSCEEEEECHHHHHHHHHC
T ss_pred CCcHHHHh-CC-------CeEECCCCCHHHHHHHHHHcCCcEEEEE--eCCCCEEEEeeHHHHHHHHhc
Confidence 56789999 66 8999999999999999999999999999 788999999999999988764
No 85
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.73 E-value=1e-09 Score=80.57 Aligned_cols=73 Identities=18% Similarity=0.317 Sum_probs=59.5
Q ss_pred CccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC--c-eeEEEEHHHHHHHHHHhhHHHHHHHHHhhhc
Q 028491 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--R-IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205 (208)
Q Consensus 130 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~-~vGiit~~dll~~~~~~~~~~~~~~~~~~~~ 205 (208)
...+++++|+++++++++++++++.+|++.|.+++++++||+|+ + ++|+||..|+++.+... ....++++++.
T Consensus 36 ~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~---~~~~v~~im~~ 111 (156)
T 3oi8_A 36 SDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP---EQFHLKSILRP 111 (156)
T ss_dssp TTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG---GGCCHHHHCBC
T ss_pred CCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC---CcccHHHHcCC
Confidence 46789999986446899999999999999999999999999986 4 99999999999876542 22345555543
No 86
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.73 E-value=1.6e-08 Score=70.47 Aligned_cols=57 Identities=21% Similarity=0.411 Sum_probs=52.7
Q ss_pred ccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHH
Q 028491 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122 (208)
Q Consensus 57 ~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~ 122 (208)
.+++++|.++ +.++++++++.++++.|.+++.+.+||+ |++|+++|+||..||++.+
T Consensus 62 ~~v~~~~~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 62 KTIEEIMTRN-------VITAHEDEPVDHVAIKMSKYNISGVPVV--DDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp CBGGGTSBSS-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHH
T ss_pred cCHHHHhcCC-------CeEECCCCCHHHHHHHHHHhCCCeEEEE--CCCCCEEEEEeHHHHHHHh
Confidence 3789999887 8999999999999999999999999999 7889999999999998864
No 87
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.72 E-value=2.5e-08 Score=74.24 Aligned_cols=61 Identities=20% Similarity=0.319 Sum_probs=56.2
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
...+++++|.+. +.++.+++++.+|++.|.++++.++||+ |++|+++|+||..||++.+..
T Consensus 96 ~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 96 YGKVVGDLMTPS-------PLVVRDSTNLEDAARLLLETKFRRLPVV--DADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TTCBHHHHSEES-------CCCEETTSBHHHHHHHHTTSTTCEEEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred ccccHHHHhCCC-------ceEeCCCCcHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEEHHHHHHHHHH
Confidence 356899999998 8999999999999999999999999999 788999999999999988754
No 88
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.71 E-value=1.5e-08 Score=75.83 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=61.9
Q ss_pred EEEeechHH--HHHHHHhcCCCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC--c-eeEEEEHHH
Q 028491 109 IAGIFTERD--YLRKIVGQGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG--R-IVGMISIVD 183 (208)
Q Consensus 109 ~iG~vt~~d--l~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~--~-~vGiit~~d 183 (208)
--|.++..+ ++..++. ....+++++|++.++++++++++++.+|++.|.+++++++||+++ + ++|+||..|
T Consensus 15 ~~g~l~~~e~~~i~~~l~----l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~D 90 (173)
T 3ocm_A 15 AVPAFGVEERNMVSGVLT----LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKD 90 (173)
T ss_dssp ---CCCHHHHHHHHHHHH----HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHH
T ss_pred hcCCcCHHHHHHHHHHhc----cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHH
Confidence 348888555 3333332 346789999985446899999999999999999999999999975 5 999999999
Q ss_pred HHHHHHHh
Q 028491 184 VVRAVVEQ 191 (208)
Q Consensus 184 ll~~~~~~ 191 (208)
+++.+...
T Consensus 91 l~~~~~~~ 98 (173)
T 3ocm_A 91 LVADLITE 98 (173)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcC
Confidence 99987643
No 89
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.70 E-value=3.9e-08 Score=69.53 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=52.0
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
..+++++|.+ +.++.+++++.+|++.|.+++...+||+ |++|+++|+||..|+++++..
T Consensus 68 ~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~pVv--d~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 68 ALDIRSLVRP--------AVFIPEVKRLNVLLREFRASRNHLAIVI--DEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp TSCGGGGCBC--------CCEEETTCBHHHHHHHHHTSSCCEEEEE--CC-CCEEEEEEHHHHHHHHHH
T ss_pred CcCHHHHhCC--------CeEeCCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHhC
Confidence 5678899854 5789999999999999999999999999 788999999999999988754
No 90
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.70 E-value=4.4e-08 Score=70.12 Aligned_cols=66 Identities=24% Similarity=0.470 Sum_probs=53.6
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
..+++++|.+.... ..++.++++++++.++++.|.+++...+||+ |++|+++|+||..||++.+..
T Consensus 76 ~~~v~~~m~~~~~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vv--d~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 76 SLSVGEALMRRSDD-FEGVYTCTKNDKLSTIMDNIRKARVHRFFVV--DDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp CSBHHHHHHHCC-------CEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHHH
T ss_pred CccHHHHHhcCccc-cCCCeEECCCCcHHHHHHHHHHCCCCEEEEE--CCCCCEEEEEEHHHHHHHHHh
Confidence 56899999862100 0017899999999999999999999999999 778999999999999987654
No 91
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.68 E-value=1.4e-08 Score=73.66 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=58.7
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHhhHHHHHHHHHhhh
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQQKGELKRLNEFIR 204 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~~~~~~~~~~~~~~ 204 (208)
..+++++|.+..+++++++++++.+|++.|.+++++.+||+|++ ++|+||..|+++.+..........+++++.
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 102 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMT 102 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSE
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcC
Confidence 45899999864358899999999999999999999999999954 999999999999876432212234455543
No 92
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.67 E-value=4.6e-08 Score=69.63 Aligned_cols=60 Identities=22% Similarity=0.441 Sum_probs=53.7
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcC-----CcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHN-----IGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~-----~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
...+++++|.++ +.++++++++.++++.|.+++ .+.+||+ |++|+++|+||..|+++.+.
T Consensus 71 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 71 LETTIGDVMTKD-------VITIHEDASILEAIKKMDISGKKEEIINQLPVV--DKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp SSCBHHHHSCSS-------CCCEETTSBHHHHHHHHTCC-----CCCEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCCC-------cEEECCCCCHHHHHHHHHhcCCccccccEEEEE--CCCCeEEEEEEHHHHHHHHH
Confidence 466899999988 899999999999999999999 9999999 77899999999999988653
No 93
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.67 E-value=1.9e-08 Score=71.03 Aligned_cols=58 Identities=14% Similarity=0.209 Sum_probs=53.6
Q ss_pred ccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 57 ISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 57 ~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
.+++++|.++ +.++.+++++.++++.|.+++...+||+ |++|+++|+||..|+++++.
T Consensus 68 ~~v~~~m~~~-------~~~v~~~~~l~~~~~~~~~~~~~~lpVv--d~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 68 EKLGEELLET-------VRSYRPGEQLFDNLISVAAAKCSVVPLA--DEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCCGGGCBC-------CCCBCTTSBGGGSHHHHHHCSSSEEEEE--CTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHHccCC-------CcEECCCCCHHHHHHHHHhCCCcEEEEE--CCCCCEEEEEEHHHHHHHHH
Confidence 5789999988 8899999999999999999999999999 78999999999999988653
No 94
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.67 E-value=4e-08 Score=69.59 Aligned_cols=60 Identities=27% Similarity=0.402 Sum_probs=54.7
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
..+++++|.++ +.++++++++.++++.|.+++.+.+||+ |++|+++|+||..|+++.+..
T Consensus 66 ~~~v~~~~~~~-------~~~v~~~~~l~~~~~~~~~~~~~~l~Vv--d~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 66 ETKAEEFMTAS-------LITIREDSPITGALALMRQFNIRHLPVV--DDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp TCBGGGTSEEC-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHHHHHH
T ss_pred ccCHHHHcCCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEE--CCCCeEEEEEEHHHHHHHHHH
Confidence 46889999887 8899999999999999999999999999 778999999999999887644
No 95
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.67 E-value=3.5e-08 Score=70.10 Aligned_cols=60 Identities=17% Similarity=0.348 Sum_probs=54.6
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
....+++++|.++ +.++++++++.+|++.|.+++.+.+||+ | +|+++|+||..|+++.+.
T Consensus 71 ~~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~lpVv--d-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTRQ-------VAYVDLNNTNEDCMALITEMRVRHLPVL--D-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBCS-------CCCBCTTCBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccCC-------CeEECCCCcHHHHHHHHHHhCCCEEEEE--e-CCEEEEEEEHHHHHHHHH
Confidence 3467899999988 8999999999999999999999999999 6 689999999999988764
No 96
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.66 E-value=3.9e-08 Score=75.54 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=55.7
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhc
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ 125 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~ 125 (208)
..+++++|.++ ++++++++++.+|++.|.++++..+||+ |++|+++|+||..|++..+..+
T Consensus 115 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVV--D~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 115 HEPLISLLSED-------SRALTANTTLLDAAEAIEHSREIELPVI--DDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp TSBGGGGCCSS-------CCCEETTSCHHHHHHHHHTSSCSEEEEE--CTTSBEEEEEEHHHHHHHHHHH
T ss_pred cchHHHHhcCC-------CeEECCCCCHHHHHHHHHhcCCCEEEEE--cCCCeEEEEEEHHHHHHHHHHH
Confidence 56789999888 8999999999999999999999999999 8899999999999999876543
No 97
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.66 E-value=2.1e-08 Score=71.45 Aligned_cols=57 Identities=25% Similarity=0.417 Sum_probs=51.8
Q ss_pred CccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeec-Cc-eeEEEEHHHHHHHH
Q 028491 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID-GR-IVGMISIVDVVRAV 188 (208)
Q Consensus 130 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd-~~-~vGiit~~dll~~~ 188 (208)
...+++++|.+ ++.++++++++.+|++.|.+++++.+||+| ++ ++|+||..|+++.+
T Consensus 5 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 63 (138)
T 2yzi_A 5 MKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRV 63 (138)
T ss_dssp TTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHT
T ss_pred hhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Confidence 46789999997 899999999999999999999999999999 45 99999999998543
No 98
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.66 E-value=2e-08 Score=73.22 Aligned_cols=61 Identities=25% Similarity=0.370 Sum_probs=54.1
Q ss_pred ccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecCc--eeEEEEHHHHHHHHHHh
Q 028491 131 YTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDGR--IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~--~vGiit~~dll~~~~~~ 191 (208)
..+++++|.+.+++.++++++++.+|++.|.+++++.+||+|++ ++|+||..|+++.+...
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~ 76 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEH 76 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhc
Confidence 56799999953379999999999999999999999999999854 99999999999998753
No 99
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.65 E-value=2.6e-08 Score=73.47 Aligned_cols=61 Identities=18% Similarity=0.285 Sum_probs=54.6
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
....+++++|.++ +.++++++++.+|++.|.++++..+||+ |+ |+++|+||..||++++..
T Consensus 90 ~~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 90 SLQQSVSVAMTKN-------VVRCQHNSTTDQLMEIMTGGRFRHVPVE--EN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGTSBGGGTSBSS-------CCCBCTTCBHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHHHTTC
T ss_pred cccCCHHHHhcCC-------CeEECCCCcHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHHHHH
Confidence 3457899999988 8999999999999999999999999999 66 999999999999987543
No 100
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.64 E-value=6.5e-08 Score=75.95 Aligned_cols=60 Identities=25% Similarity=0.531 Sum_probs=55.3
Q ss_pred CccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC-c-eeEEEEHHHHHHHHHHh
Q 028491 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG-R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 130 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~-~-~vGiit~~dll~~~~~~ 191 (208)
...+++++|.+ ++.++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+...
T Consensus 5 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 5 VKLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp CCCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCC
T ss_pred ccCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 46789999998 8999999999999999999999999999997 4 99999999999998653
No 101
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.64 E-value=9e-08 Score=70.25 Aligned_cols=59 Identities=22% Similarity=0.390 Sum_probs=53.9
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
...+++++|.++ +.++++++++.+|++.|.+++...+||+ |+ |+++|+||..||++.+.
T Consensus 76 ~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 76 FETPLFEVMHTD-------VTSVAPQAGLKESAIYMQKHKIGCLPVV--AK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp CCCBHHHHSCSC-------EEEBCTTSBHHHHHHHHHHTTCSCEEEE--ET-TEEEEEECHHHHHHHHH
T ss_pred cccCHHHHhcCC-------CeEECCCCCHHHHHHHHHHhCCCEEEEE--EC-CEEEEEEEHHHHHHHHH
Confidence 467899999988 9999999999999999999999999999 56 99999999999988653
No 102
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.63 E-value=7.3e-08 Score=76.33 Aligned_cols=61 Identities=15% Similarity=0.340 Sum_probs=55.6
Q ss_pred CCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC---c-eeEEEEHHHHHHHHHHh
Q 028491 129 PKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG---R-IVGMISIVDVVRAVVEQ 191 (208)
Q Consensus 129 ~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~---~-~vGiit~~dll~~~~~~ 191 (208)
....+|+++|++ +++++.+++++.+|.++|.+++++.+||+|+ + ++|+||+.||++++...
T Consensus 10 ~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 10 KYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp CSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred cCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 346789999998 8999999999999999999999999999985 4 99999999999987654
No 103
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.62 E-value=3.6e-08 Score=70.42 Aligned_cols=59 Identities=19% Similarity=0.253 Sum_probs=52.3
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
...+++++|.+ +.++.+++++.+|++.|.+++...+||+ |++|+++|+||..|+++++.
T Consensus 68 ~~~~v~~~m~~--------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv--d~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 68 DSDDVKKLLRP--------ATFVPESKRLNVLLREFRANHNHMAIVI--DEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGCCGGGTCBC--------CCEEETTCBHHHHHHHHHHHTCCEEEEE--CTTSCEEEEEEHHHHHTTC-
T ss_pred CCcCHHHHcCC--------CeEECCCCcHHHHHHHHHhcCCeEEEEE--eCCCCEEEEEEHHHHHHHHh
Confidence 45688999964 5889999999999999999999999999 88899999999999987654
No 104
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.62 E-value=8.1e-08 Score=69.45 Aligned_cols=61 Identities=21% Similarity=0.367 Sum_probs=54.3
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ 125 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~ 125 (208)
....+++++|.++ +.++++++++.+|++.|.++++ +||+ |++|+++|+||..||++.+...
T Consensus 84 ~~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~~~~~~~--l~Vv--d~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 84 LEEMKVEQVMKQD-------IPVLKLEDSFAKALEMTIDHPF--ICAV--NEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp GGGCBGGGTCBSS-------CCEEETTCBHHHHHHHHHHCSE--EEEE--CTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCHHHHhcCC-------CceeCCCCCHHHHHHHHHhCCE--EEEE--CCCCcEEEEEEHHHHHHHHHHH
Confidence 3467899999988 8999999999999999999886 9999 7889999999999999876543
No 105
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.61 E-value=9.1e-08 Score=69.88 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=56.8
Q ss_pred cCCCCCccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCE-eeeecCc-eeEEEEHHHHHHHHH
Q 028491 125 QGRSPKYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRH-VPVIDGR-IVGMISIVDVVRAVV 189 (208)
Q Consensus 125 ~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~-lpVvd~~-~vGiit~~dll~~~~ 189 (208)
++......+++++|.+ ++.++++++++.+|++.|.+++++. +||+|++ ++|+||..|+++.+.
T Consensus 9 ~~~~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 9 HHHHMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSG 73 (157)
T ss_dssp -CTTCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred hhhhhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHh
Confidence 3445567889999998 8999999999999999999999999 9999998 999999999999875
No 106
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.61 E-value=5.3e-08 Score=71.36 Aligned_cols=62 Identities=23% Similarity=0.441 Sum_probs=55.3
Q ss_pred cccccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCc---eEEEeechHHHHHHHHh
Q 028491 54 LENISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQ---HIAGIFTERDYLRKIVG 124 (208)
Q Consensus 54 ~~~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~---~~iG~vt~~dl~~~~~~ 124 (208)
....+++++|.+ + +.++.+++++.+|++.|.++++.++||+ |++| +++|+||..||++.+..
T Consensus 78 ~~~~~v~~~m~~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 78 LTSVPVHIIMTRMPN-------ITVCRREDYVMDIAKHLIEKQIDALPVI--KDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTTCBGGGTSEETTS-------CCCBCTTSBHHHHHHHHHHHTCSEEEEE--EECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ccCcCHHHHHcCCCC-------cEEECCCCCHHHHHHHHHHcCCcEEEEE--eCCCcceeEEEEEEHHHHHHHHHH
Confidence 346789999998 6 8899999999999999999999999999 6677 99999999999987643
No 107
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.60 E-value=3.7e-08 Score=69.75 Aligned_cols=57 Identities=19% Similarity=0.400 Sum_probs=52.3
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHH
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~ 121 (208)
...+++++|.++ +.++++++++.++++.|.+++.+++||+ |+ |+++|+||..||++.
T Consensus 72 ~~~~v~~~m~~~-------~~~v~~~~~l~~~~~~m~~~~~~~l~Vv--d~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 72 NTATAGELARDS-------IYYVDANASIQEMLNVMEEHQVRRVPVI--SE-HRLVGIVTEADIARH 128 (133)
T ss_dssp TTSBHHHHHTTC-------CCCEETTCCHHHHHHHHHHHTCSEEEEE--ET-TEEEEEEEHHHHHHT
T ss_pred cccCHHHHhcCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEE--EC-CEEEEEEEHHHHHHH
Confidence 357899999988 8999999999999999999999999999 55 899999999998875
No 108
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.60 E-value=1e-07 Score=69.18 Aligned_cols=58 Identities=26% Similarity=0.467 Sum_probs=52.2
Q ss_pred cccHHHhhc------ccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHH
Q 028491 56 NISVAEVLM------TKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122 (208)
Q Consensus 56 ~~~v~~~m~------~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~ 122 (208)
..+++++|. ++ +.++.+++++.+|++.|.+++...+||+ |++|+++|+||..||++.+
T Consensus 86 ~~~v~~~m~~~~~~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEG-------VLKCYLHETLETIINRLVEAEVHRLVVV--DENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHT-------CSEECTTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCC-------CeEECCCCcHHHHHHHHHHcCCeEEEEE--CCCCeEEEEEEHHHHHHHH
Confidence 457888886 55 8899999999999999999999999999 7789999999999998865
No 109
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.58 E-value=6.5e-08 Score=69.29 Aligned_cols=56 Identities=21% Similarity=0.321 Sum_probs=51.7
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHH
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~ 121 (208)
..+++++|.++ +.+++++ ++.+|++.|.+++...+||+ |++|+++|+||..||+++
T Consensus 70 ~~~v~~~m~~~-------~~~v~~~-~l~~a~~~m~~~~~~~l~Vv--d~~g~~~Giit~~dll~~ 125 (141)
T 2rih_A 70 DGPAMPIANSP-------ITVLDTD-PVHVAAEKMRRHNIRHVVVV--NKNGELVGVLSIRDLCFE 125 (141)
T ss_dssp TSBSGGGCBCC-------CEEETTS-BHHHHHHHHHHHTCSEEEEE--CTTSCEEEEEEHHHHHSC
T ss_pred CCCHHHHcCCC-------CeEEcCC-CHHHHHHHHHHcCCeEEEEE--cCCCcEEEEEEHHHHHHH
Confidence 56889999888 9999999 99999999999999999999 788999999999998764
No 110
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.54 E-value=1.7e-07 Score=68.15 Aligned_cols=61 Identities=33% Similarity=0.456 Sum_probs=54.2
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ 125 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~ 125 (208)
+...+++++|.++ +.++++++++.+|++.|.++++ +||+ |++|+++|+||..||++.+...
T Consensus 80 ~~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~--l~Vv--d~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 80 LETMKVEEVMNRN-------IPRLRLDDSLMKAVGLIVNHPF--VCVE--NDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp GGTCBGGGTCBCC-------CCEEETTSBHHHHHHHHHHSSE--EEEE--CSSSSEEEEEEHHHHHHHHHHT
T ss_pred hcCCcHHHHhCCC-------CceecCCCcHHHHHHHHhhCCE--EEEE--cCCCeEEEEEEHHHHHHHHHHH
Confidence 3467899999988 8999999999999999999887 9999 7789999999999999876544
No 111
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.53 E-value=2.1e-07 Score=68.02 Aligned_cols=59 Identities=20% Similarity=0.470 Sum_probs=54.1
Q ss_pred CccchhhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeecC---c-eeEEEEHHHHHHHHHH
Q 028491 130 KYTRVAEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVIDG---R-IVGMISIVDVVRAVVE 190 (208)
Q Consensus 130 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~---~-~vGiit~~dll~~~~~ 190 (208)
...+++++|.+ ++.++++++++.+|++.|.+++++.+||+|+ + ++|+||..|+++.+..
T Consensus 11 ~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~ 73 (164)
T 2pfi_A 11 HHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQA 73 (164)
T ss_dssp CSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC
T ss_pred cCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHh
Confidence 46789999998 8999999999999999999999999999985 5 9999999999988754
No 112
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.53 E-value=6.6e-07 Score=77.77 Aligned_cols=101 Identities=12% Similarity=0.161 Sum_probs=76.5
Q ss_pred cccHHHhhcc-cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccch
Q 028491 56 NISVAEVLMT-KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRV 134 (208)
Q Consensus 56 ~~~v~~~m~~-~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v 134 (208)
..+++++|++ + ++++++++++.++.+.|.++++..+||+ |++++++|+||.+|+++.+.. . ..+
T Consensus 174 ~~~V~~vM~~~~-------~vtv~~~~~l~eal~~m~~~~i~~lpVV--De~g~l~GiIT~~Dil~~~~~-p-----~a~ 238 (511)
T 3usb_A 174 SIKISDVMTKEQ-------LITAPVGTTLSEAEKILQKYKIEKLPLV--DNNGVLQGLITIKDIEKVIEF-P-----NSA 238 (511)
T ss_dssp SSBHHHHCCCCC-------CCCEETTCCHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHHC-T-----TCC
T ss_pred CCcHHHhcccCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEE--eCCCCEeeeccHHHHHHhhhc-c-----cch
Confidence 5789999997 6 8999999999999999999999999999 899999999999999987542 1 123
Q ss_pred hhhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeee
Q 028491 135 AEIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVI 171 (208)
Q Consensus 135 ~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVv 171 (208)
.+.+.+-.....+.......+.+..+.+.+++.+.|-
T Consensus 239 ~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id 275 (511)
T 3usb_A 239 KDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLD 275 (511)
T ss_dssp BCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred hhhccceeeeeeeeeccchHHHHHHHHhhccceEEec
Confidence 3433331123344445455666777778888877664
No 113
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.51 E-value=1.5e-07 Score=70.28 Aligned_cols=62 Identities=16% Similarity=0.206 Sum_probs=55.7
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhc
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQ 125 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~ 125 (208)
....+++++|.++ +.++++++++.+|++.|.+++..++||+ + +|+++|+||..||++++...
T Consensus 105 ~~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~l~Vv--d-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 105 PPTLKLRNILDLS-------PFTVTDLTPMEIVVDIFRKLGLRQCLVT--H-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CCCEECGGGEESS-------CCEEETTSBHHHHHHHHHHHTCSEEEEE--E-TTEEEEEEEHHHHHHHHHHH
T ss_pred ccCccHHHhhCcC-------CeEeCCCCCHHHHHHHHHhCCCcEEEEE--E-CCEEEEEEEHHHHHHHHHHh
Confidence 3457899999988 8999999999999999999999999999 5 79999999999999877654
No 114
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.48 E-value=1.1e-07 Score=71.36 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=53.7
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHH
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~ 121 (208)
....+++++|.++ +.++.+++++.+|++.|.+++.+.+||+ |++|+++|+||..||++.
T Consensus 72 ~~~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~~~Givt~~dll~~ 130 (184)
T 1pvm_A 72 PDEVPIRLVMRKP-------IPKVKSDYDVKDVAAYLSENGLERCAVV--DDPGRVVGIVTLTDLSRY 130 (184)
T ss_dssp GGGSBGGGTSBSS-------CCEEETTCBHHHHHHHHHHHTCSEEEEE--CTTCCEEEEEEHHHHTTT
T ss_pred cccCCHHHHhCCC-------CcEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHHH
Confidence 3456899999988 8999999999999999999999999999 777999999999998764
No 115
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.48 E-value=2.5e-07 Score=74.55 Aligned_cols=61 Identities=20% Similarity=0.318 Sum_probs=55.5
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
...+++++|.++ ++++++++++.+|++.|.+++...+||+ |++|+++|+||..|++..+..
T Consensus 199 ~~~~v~~im~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 DDTLIADILNER-------VISVHVGDDQEDVAQTIRDYDFLAVPVT--DYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSBHHHHSBSC-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHcCCC-------CeeecCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHHHHHH
Confidence 356899999888 8999999999999999999999999999 788999999999999987643
No 116
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.47 E-value=2.8e-07 Score=67.36 Aligned_cols=60 Identities=25% Similarity=0.392 Sum_probs=53.5
Q ss_pred cccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHh
Q 028491 54 LENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVG 124 (208)
Q Consensus 54 ~~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~ 124 (208)
....+++++|.++ +.++.+++++.+|++.|.++++ +||+ |++|+++|+||..|+++.+..
T Consensus 83 ~~~~~v~~~m~~~-------~~~v~~~~~l~~a~~~m~~~~~--lpVv--d~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 83 LDQITVEEVMLTD-------IPRLHINDPIMKGFGMVINNGF--VCVE--NDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp TTTSBHHHHSBCS-------CCEEETTSBHHHHHHHTTTCSE--EEEE--CTTCBEEEEEEHHHHHHHHHH
T ss_pred hccCCHHHhcCCC-------CceEcCCCCHHHHHHHHHhCCE--EEEE--eCCCeEEEEEEHHHHHHHHHH
Confidence 3467899999988 8999999999999999998876 9999 778999999999999987654
No 117
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.45 E-value=1e-07 Score=83.18 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=60.9
Q ss_pred ccchhhhhccCCCeEEEcCC-CCHHHHHHHHHhcCCCEeeeec--Cc-eeEEEEHHHHHHHHHHhhHHHHHHHHHhhhc
Q 028491 131 YTRVAEIMTDENKLITLPSD-ANILHAMQLMTDKHIRHVPVID--GR-IVGMISIVDVVRAVVEQQKGELKRLNEFIRG 205 (208)
Q Consensus 131 ~~~v~~im~~~~~~~~v~~~-~~l~~a~~~~~~~~~~~lpVvd--~~-~vGiit~~dll~~~~~~~~~~~~~~~~~~~~ 205 (208)
..+|+++|++ ++++++++ +++.+|++.|.+++++.+||+| ++ ++|+||..||++.+..........++++|..
T Consensus 383 ~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEET
T ss_pred CCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhcC
Confidence 5789999998 89999999 9999999999999999999999 45 9999999999999876433333445555543
No 118
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.42 E-value=2.1e-07 Score=74.68 Aligned_cols=59 Identities=29% Similarity=0.394 Sum_probs=52.9
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
..+++++|.++ ++++++++++.++++.|.+++...+||+ |++|+++|+||..|++..+.
T Consensus 198 ~~~v~~im~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVv--d~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 198 RTRVAEIMNPK-------VVYVRTDTDQEEVARLMADYDFTVLPVV--DEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TCBSTTTSBSS-------CCCEETTSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHC-
T ss_pred CCcHHHHhCCC-------CeEEeCCCCHHHHHHHHHhcCCCEEEEE--eCCCeEEEEEEHHHHHHHHH
Confidence 45778888777 8999999999999999999999999999 88899999999999988654
No 119
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.41 E-value=8.6e-08 Score=83.24 Aligned_cols=108 Identities=11% Similarity=0.165 Sum_probs=24.1
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
..+++++|++..+ ++++++++++.+|++.|.++++..+||+ |++++++|+||.+||++.+.... . ...+..
T Consensus 160 ~~~V~diM~~~~~-----~~tv~~~~sl~ea~~~m~~~~i~~lpVV--De~g~lvGiIT~~Dil~~~~~~~-~-~~d~~~ 230 (503)
T 1me8_A 160 ETKVSDMMTPFSK-----LVTAHQDTKLSEANKIIWEKKLNALPII--DDDQHLRYIVFRKDYDRSQVCHN-E-LVDSQK 230 (503)
T ss_dssp ---------------------------------------------------------------------CC-C-CBCTTS
T ss_pred cCcHHHHhCCCCC-----CEEEcCCCcHHHHHHHHHHcCCCEEEEE--cCCCeEEEEEEecHHHHhhhccc-c-hhcccc
Confidence 5678899987433 7899999999999999999999999999 78899999999999988754322 1 112222
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeee-ecCc-eeE
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPV-IDGR-IVG 177 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpV-vd~~-~vG 177 (208)
.++. ...++. ....+.++.|.+.+++.++| .+++ ..|
T Consensus 231 ~l~v----~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~ 269 (503)
T 1me8_A 231 RYLV----GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEW 269 (503)
T ss_dssp CBCC----EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHH
T ss_pred cccc----ccccCc-hhHHHHHHHHHhhhccceEEecccCcccc
Confidence 2322 234555 66677788888889987666 3333 444
No 120
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.25 E-value=1.3e-06 Score=75.22 Aligned_cols=60 Identities=28% Similarity=0.385 Sum_probs=54.7
Q ss_pred ccccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 55 ENISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 55 ~~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
...+++++|+++ ++++++++++.++++.|.+++...+||+ |++|+++|+||..|+++.+.
T Consensus 217 ~~~~v~dim~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVV--De~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 217 PRTRVAEIMNPK-------VVYVRTDTDQEEVARLMADYDFTVLPVV--DEEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp TTSBGGGTSBSS-------CCCEESSSBHHHHHHHHHHHTCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHhCCC-------CeEEeCCCcHHHHHHHHHhcCCcEEEEE--cCCCEEEEEEehHhhHHHHH
Confidence 356889999877 8999999999999999999999999999 88999999999999998654
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.00 E-value=3.4e-05 Score=66.63 Aligned_cols=59 Identities=19% Similarity=0.340 Sum_probs=53.5
Q ss_pred cccHHHhhcc-cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHH
Q 028491 56 NISVAEVLMT-KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIV 123 (208)
Q Consensus 56 ~~~v~~~m~~-~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~ 123 (208)
..+++++|++ + ++++++++++.++++.|.+++...+||+ |++++++|+||..|+++.+.
T Consensus 151 ~~~v~~im~~~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVV--d~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 151 NAPISEHMTSEH-------LVTAAVGTDLETAERILHEHRIEKLPLV--DNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSBTTTSCCCSC-------CCCEETTCCHHHHHHHHHHTTCSEEEEE--CTTSBEEEEEEHHHHHHHHH
T ss_pred CCcHHHHcCCCC-------CEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEEHHHHHHHHh
Confidence 4578888887 6 8899999999999999999999999999 88999999999999988754
No 122
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.95 E-value=7.4e-06 Score=70.89 Aligned_cols=58 Identities=21% Similarity=0.402 Sum_probs=3.9
Q ss_pred cccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHH
Q 028491 56 NISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122 (208)
Q Consensus 56 ~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~ 122 (208)
..+++++|++ + ++++++++++.++++.|.++++..+||+ |++++++|+||..|+++.+
T Consensus 154 ~~~v~~im~~~~~-------~~~v~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 154 SKKIKDLMTPREK-------LIVAPPDISLEKAKEILHQHRIEKLPLV--SKDNKLVGLITIKDIMSVI 213 (494)
T ss_dssp ----------------------------------------------------------------CHHHH
T ss_pred CCcHHHHhCCCCC-------CeEECCCCCHHHHHHHHHHcCCcEEEEE--cCCCeEEEEEEHHHHHhhh
Confidence 4678999998 6 8999999999999999999999999999 7899999999999999875
No 123
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.92 E-value=5e-06 Score=74.08 Aligned_cols=54 Identities=15% Similarity=0.019 Sum_probs=48.5
Q ss_pred cHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHH
Q 028491 58 SVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121 (208)
Q Consensus 58 ~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~ 121 (208)
+++++|+++ +.++++++++.++.+.|.+++++++||+ ++|+++|+||.+|++++
T Consensus 569 ~v~~iMt~~-------pitV~~~~~l~ea~~~M~~~~i~~lpVv---e~G~lvGIVT~~Dll~~ 622 (632)
T 3org_A 569 SLVVPCDVS-------PIVVTSYSLVRQLHFLFVMLMPSMIYVT---ERGKLVGIVEREDVAYG 622 (632)
T ss_dssp --CCSCCCC-------CCEEETTCBHHHHHHHHHHTCCSEEEEE---ETTEEEEEEEGGGTEEC
T ss_pred ccchhhcCC-------CceecCCCcHHHHHHHHHhcCCCEEEEE---ECCEEEEEEehhhHHHH
Confidence 378899998 9999999999999999999999999999 57899999999998753
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.91 E-value=1e-05 Score=69.98 Aligned_cols=58 Identities=21% Similarity=0.333 Sum_probs=0.0
Q ss_pred cccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHH
Q 028491 56 NISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKI 122 (208)
Q Consensus 56 ~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~ 122 (208)
..+++++|++ + ++++++++++.++.++|.++++..+||+ |++++++|+||.+|+++..
T Consensus 146 ~~~V~~vMtp~~~-------~vtv~~~~~l~ea~~~m~~~~i~~lpVV--De~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 146 GDTVAAIMTPKDK-------LVTAREGTPLEEMKAKLYENRIEKMLVV--DENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------------------------------------
T ss_pred CCcHHHHhccCCC-------CEEECCCCcHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEehHHhhhhc
Confidence 5689999994 4 8999999999999999999999999999 8999999999999998753
No 125
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.88 E-value=1e-05 Score=69.83 Aligned_cols=99 Identities=17% Similarity=0.219 Sum_probs=17.6
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHHHHhcCCCCCccchh
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRKIVGQGRSPKYTRVA 135 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~~~~~~~~~~~~~v~ 135 (208)
..+++++|+++ ++++++++++.++++.|.++++..+||+ |++++++|+||.+||++.. ... ....
T Consensus 149 ~~~v~~im~~~-------~~~v~~~~~l~eal~~m~~~~~~~lpVV--de~g~lvGiiT~~Dil~~~-~~~-----~~~~ 213 (486)
T 2cu0_A 149 GKLVKELMTKE-------VITVPESIEVEEALKIMIENRIDRLPVV--DERGKLVGLITMSDLVARK-KYK-----NAVR 213 (486)
T ss_dssp --------------------------------------------------------------------CCT-----TCCB
T ss_pred CCCHHHHccCC-------CeEECCcCcHHHHHHHHHHcCCCEEEEE--ecCCeEEEEEEHHHHHHhh-hcc-----cccc
Confidence 45788899877 8899999999999999999999999999 7889999999999988753 111 1111
Q ss_pred hhhccCCCeEEEcCCCCHHHHHHHHHhcCCCEeeeec
Q 028491 136 EIMTDENKLITLPSDANILHAMQLMTDKHIRHVPVID 172 (208)
Q Consensus 136 ~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd 172 (208)
+.+..-.-...+..+ . .+.+..+.+.+++.+ |++
T Consensus 214 ~~~g~~~v~~~~~~~-~-~~~a~~l~~~gvd~l-vvd 247 (486)
T 2cu0_A 214 DENGELLVAAAVSPF-D-IKRAIELDKAGVDVI-VVD 247 (486)
T ss_dssp CTTSCBCCEEEECTT-C-HHHHHHHHHTTCSEE-EEE
T ss_pred ccCCceeecceechh-h-HHHHHHHHHhcCCce-EEE
Confidence 111110001223443 3 566778888888875 555
No 126
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.79 E-value=1.4e-05 Score=68.92 Aligned_cols=57 Identities=19% Similarity=0.318 Sum_probs=0.0
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHH
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~ 121 (208)
..+|+++|+++ +++++++.++.+|.++|.++++..+||| |++++++|+||.+|+.+.
T Consensus 199 ~~~V~evMT~~-------lvt~~~~~~leeA~~iL~~~kieklpVV--d~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 199 ETPIKSVMTTE-------VVTGSSPITLEKANSLLRETKKGKLPIV--DSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp ------------------------------------------------------------------
T ss_pred ceEhhhhcccc-------eEEecCCCCHHHHHHHHHHccccceeEE--ccCCcEEEEEEechhhhh
Confidence 56899999998 9999999999999999999999999999 899999999999998764
No 127
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.75 E-value=1.5e-05 Score=68.92 Aligned_cols=59 Identities=19% Similarity=0.369 Sum_probs=41.5
Q ss_pred cccHHHhhcccCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHH
Q 028491 56 NISVAEVLMTKGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121 (208)
Q Consensus 56 ~~~v~~~m~~~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~ 121 (208)
..+++++|++..+ ++++++++++.++.+.|.++++..+||+ |++|+++|+||.+|+++.
T Consensus 148 ~~~v~diM~p~~~-----~vtv~~~~~l~ea~~~m~~~~i~~lpVV--De~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 148 TKSVAAVMTPKER-----LATVKEGATGAEVQEKMHKARVEKILVV--NDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp TSBGGGTSEEGGG-----CCEEECC----CGGGTCC---CCCEEEE--CTTSBCCEEECCC-----
T ss_pred CCcHHHHhcCCCC-----CEEECCCCCHHHHHHHHHHcCCCEEEEE--cCCCCEEEeehHhHHHHh
Confidence 5678999994211 7899999999999999999999999999 899999999999998874
No 128
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.47 E-value=1e-05 Score=70.40 Aligned_cols=58 Identities=14% Similarity=0.295 Sum_probs=41.0
Q ss_pred ccccHHHhhcc--cCCCCCCCeEEecCCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHHHHHH
Q 028491 55 ENISVAEVLMT--KGDDKVGSWLCCRSDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLRK 121 (208)
Q Consensus 55 ~~~~v~~~m~~--~~~~~~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~~ 121 (208)
...+++++|++ + ++++++++++.++.+.|.+++...+||+ |++++++|+||..|+++.
T Consensus 171 ~~~~v~~vm~~~~~-------~~tv~~~~~l~ea~~~m~~~~~~~lpVV--d~~g~lvGiIt~~Dll~~ 230 (514)
T 1jcn_A 171 HTTLLSEVMTPRIE-------LVVAPAGVTLKEANEILQRSKKGKLPIV--NDCDELVAIIARTDLKKN 230 (514)
T ss_dssp ----------CCBC-------CCCEETTCCSTTTTTHHHHHTCSCCCEE--SSSSCCC----CCCCSSC
T ss_pred CCCCHHHHhCCCCC-------CeEECCCCCHHHHHHHHHHcCCCcccEE--CCCCeEEEEEEHHHHHHH
Confidence 35678999998 6 8999999999999999999999999999 889999999999998764
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=42.65 E-value=60 Score=20.23 Aligned_cols=26 Identities=12% Similarity=0.196 Sum_probs=20.6
Q ss_pred CcEEEEEecCCCceEEEeechHHHHHHH
Q 028491 95 IGSLVVLKPGEQQHIAGIFTERDYLRKI 122 (208)
Q Consensus 95 ~~~~pVv~~d~~~~~iG~vt~~dl~~~~ 122 (208)
...+-++ +++|..+|+++..+-++..
T Consensus 13 ~~eVrli--~~~Ge~lGv~~~~eAl~~A 38 (78)
T 1tif_A 13 AREVRLI--DQNGDQLGIKSKQEALEIA 38 (78)
T ss_dssp CSEEEEE--CTTSCEEEEEEHHHHHHHH
T ss_pred CCEEEEE--CCCCcCCCcccHHHHHHHH
Confidence 4567788 7899999999999976643
No 130
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=42.18 E-value=30 Score=20.15 Aligned_cols=24 Identities=21% Similarity=0.019 Sum_probs=20.3
Q ss_pred cCCchHHHHHHHHHhcCCcEEEEE
Q 028491 78 RSDDTVEDAVKNMAQHNIGSLVVL 101 (208)
Q Consensus 78 ~~~~tl~~a~~~m~~~~~~~~pVv 101 (208)
-+-+|++||+..|.-.+...+...
T Consensus 10 ~kpmsveEAv~qmel~gh~F~vF~ 33 (57)
T 3k2t_A 10 LKPMDSEEAVLQMNLLGHSFYVYT 33 (57)
T ss_dssp -CCBCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEE
Confidence 367899999999998888877777
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=37.70 E-value=21 Score=25.37 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=27.2
Q ss_pred hHHHHHHHHHhcCCcEEEEEecCCCceEEEeechHH
Q 028491 82 TVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTERD 117 (208)
Q Consensus 82 tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~d 117 (208)
.+.+.++.+.+.+-+.+.|. .+++++|+|...|
T Consensus 120 ~~~~~~~~la~~G~T~v~VA---~d~~l~GvIalaD 152 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVV---EGSRVLGVIALKD 152 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEE---ETTEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEE---ECCEEEEEEEEec
Confidence 47777888888888888887 5789999998877
No 132
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=37.28 E-value=39 Score=20.32 Aligned_cols=35 Identities=14% Similarity=0.094 Sum_probs=24.9
Q ss_pred CCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeech
Q 028491 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115 (208)
Q Consensus 79 ~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~ 115 (208)
+-+|++||+..|.-.+...+... |.+..-+.+|.+
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~--n~etg~~nVVYR 45 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQ--NGDSNEVNVVYK 45 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEE--ETTTTEEEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEE--eCCCCCEEEEEE
Confidence 67899999999998888877777 333333445544
No 133
>2d7c_C RAB11 family-interacting protein 3; GTP-ASE, coiled-coil, protein transport; HET: GTP MES; 1.75A {Homo sapiens} SCOP: h.1.31.1
Probab=36.89 E-value=38 Score=18.43 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=17.9
Q ss_pred EHHHHHHHHHHhhHHHHHHHHHhhhc
Q 028491 180 SIVDVVRAVVEQQKGELKRLNEFIRG 205 (208)
Q Consensus 180 t~~dll~~~~~~~~~~~~~~~~~~~~ 205 (208)
|+.++++++.++.. ...++++|++.
T Consensus 2 S~~eL~~~l~~qee-~n~~Le~YID~ 26 (42)
T 2d7c_C 2 SRDELMEAIQKQEE-INFRLQDYIDR 26 (42)
T ss_dssp CHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 67888888765443 56788888864
No 134
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=30.69 E-value=40 Score=20.32 Aligned_cols=35 Identities=14% Similarity=0.104 Sum_probs=24.7
Q ss_pred CCchHHHHHHHHHhcCCcEEEEEecCCCceEEEeech
Q 028491 79 SDDTVEDAVKNMAQHNIGSLVVLKPGEQQHIAGIFTE 115 (208)
Q Consensus 79 ~~~tl~~a~~~m~~~~~~~~pVv~~d~~~~~iG~vt~ 115 (208)
+-+|++||+..|.-.+...+...+ .+..-+.+|.+
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n--~etg~~nVVYR 46 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTD--SEDGATNILYR 46 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEE--TTTCSEEEEEE
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEe--CCCCCEEEEEE
Confidence 678999999999988888777773 33222345444
No 135
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=27.54 E-value=19 Score=25.66 Aligned_cols=33 Identities=18% Similarity=0.474 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCCEeeeecCc-eeEEEEHHHHH
Q 028491 153 ILHAMQLMTDKHIRHVPVIDGR-IVGMISIVDVV 185 (208)
Q Consensus 153 l~~a~~~~~~~~~~~lpVvd~~-~vGiit~~dll 185 (208)
+.+.++.+...+-..+.|..++ ++|+|...|.+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEGSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCC
Confidence 6777888888888888888777 99999887754
No 136
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=20.82 E-value=89 Score=17.80 Aligned_cols=32 Identities=6% Similarity=-0.106 Sum_probs=20.8
Q ss_pred HHHHHhcCCcEEEEEecCCCceEEEeechHHHHH
Q 028491 87 VKNMAQHNIGSLVVLKPGEQQHIAGIFTERDYLR 120 (208)
Q Consensus 87 ~~~m~~~~~~~~pVv~~d~~~~~iG~vt~~dl~~ 120 (208)
.+.+...+...+|++. .+|+.+|-.+..+|..
T Consensus 40 ~~~~~~~~~~~vP~l~--~~g~~~~g~~~~~l~~ 71 (75)
T 1r7h_A 40 RDYVMALGYVQAPVVE--VDGEHWSGFRPERIKQ 71 (75)
T ss_dssp HHHHHHTTCBCCCEEE--ETTEEEESCCHHHHHH
T ss_pred HHHHHHcCCCccCEEE--ECCeEEcCCCHHHHHH
Confidence 3444567888889884 3566666567777544
No 137
>2hv8_D RAB11 family-interacting protein 3; protein transport, RAB11A, FIP3, cytokinesis, recycling endosomes; HET: GTP MES; 1.86A {Homo sapiens} SCOP: h.1.31.1
Probab=20.67 E-value=96 Score=18.49 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=18.8
Q ss_pred EEHHHHHHHHHHhhHHHHHHHHHhhhc
Q 028491 179 ISIVDVVRAVVEQQKGELKRLNEFIRG 205 (208)
Q Consensus 179 it~~dll~~~~~~~~~~~~~~~~~~~~ 205 (208)
.|+.++++++.++.. ..+++++|+++
T Consensus 23 ~s~deL~~~l~eqee-~n~~Le~YID~ 48 (64)
T 2hv8_D 23 VSRDELMEAIQKQEE-INFRLQDYIDR 48 (64)
T ss_dssp SCHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 467888888875443 56788888874
No 138
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=20.43 E-value=67 Score=21.43 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=14.2
Q ss_pred EEEEEecCCCceEEEeechH
Q 028491 97 SLVVLKPGEQQHIAGIFTER 116 (208)
Q Consensus 97 ~~pVv~~d~~~~~iG~vt~~ 116 (208)
..||. +++|+++|+|...
T Consensus 105 ~~PV~--~~~g~viGvv~vg 122 (131)
T 1p0z_A 105 KSPIQ--DATGKVIGIVSVG 122 (131)
T ss_dssp EEEEE--CTTCCEEEEEEEE
T ss_pred EEeEE--CCCCCEEEEEEEE
Confidence 46898 6789999998753
No 139
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=20.22 E-value=67 Score=21.85 Aligned_cols=19 Identities=11% Similarity=0.062 Sum_probs=14.8
Q ss_pred EEEEEecCCCceEEEeechHH
Q 028491 97 SLVVLKPGEQQHIAGIFTERD 117 (208)
Q Consensus 97 ~~pVv~~d~~~~~iG~vt~~d 117 (208)
..||. +++|+++|+|+..-
T Consensus 110 ~~PV~--~~~g~viGvv~vg~ 128 (142)
T 3by8_A 110 FTPIY--DENHKQIGVVAIGL 128 (142)
T ss_dssp EEEEE--CTTSCEEEEEEEEE
T ss_pred EEeEE--cCCCCEEEEEEEeE
Confidence 46998 66799999987554
Done!