Query 028496
Match_columns 208
No_of_seqs 202 out of 1725
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 12:25:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028496.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028496hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 99.9 7.5E-23 1.6E-27 167.0 9.7 147 1-202 3-158 (220)
2 PRK13226 phosphoglycolate phos 99.9 1.5E-22 3.3E-27 166.0 8.4 145 1-202 11-164 (229)
3 PLN02770 haloacid dehalogenase 99.9 2.5E-22 5.5E-27 166.6 8.2 144 1-202 21-177 (248)
4 PRK13288 pyrophosphatase PpaX; 99.9 2.5E-22 5.4E-27 162.6 7.3 141 1-202 2-151 (214)
5 TIGR01422 phosphonatase phosph 99.9 1.6E-21 3.5E-26 161.8 11.6 159 2-202 2-169 (253)
6 PLN03243 haloacid dehalogenase 99.9 9.1E-22 2E-26 164.5 9.5 146 2-202 24-178 (260)
7 PRK13478 phosphonoacetaldehyde 99.9 3.7E-21 8E-26 161.1 11.6 159 2-202 4-171 (267)
8 TIGR03351 PhnX-like phosphonat 99.8 5.7E-21 1.2E-25 155.1 10.5 146 2-202 1-158 (220)
9 TIGR01449 PGP_bact 2-phosphogl 99.8 2.1E-21 4.6E-26 156.5 7.0 145 5-202 1-154 (213)
10 PLN02575 haloacid dehalogenase 99.8 3.2E-21 7E-26 167.9 6.9 145 3-202 132-285 (381)
11 COG0637 Predicted phosphatase/ 99.8 1.8E-21 4E-26 159.0 4.2 146 1-201 1-154 (221)
12 PRK11587 putative phosphatase; 99.8 1E-20 2.2E-25 153.9 7.8 143 1-202 2-151 (218)
13 PRK10725 fructose-1-P/6-phosph 99.8 9.7E-21 2.1E-25 150.0 6.9 144 2-202 5-155 (188)
14 PRK13225 phosphoglycolate phos 99.8 1.9E-20 4.1E-25 157.6 8.0 141 2-202 62-208 (273)
15 PRK06698 bifunctional 5'-methy 99.8 2.7E-20 5.8E-25 167.1 8.7 145 1-202 240-398 (459)
16 PRK10826 2-deoxyglucose-6-phos 99.8 2.5E-20 5.4E-25 151.8 6.7 67 135-202 88-161 (222)
17 TIGR02009 PGMB-YQAB-SF beta-ph 99.8 1E-19 2.2E-24 143.6 8.7 64 136-202 85-155 (185)
18 PRK13223 phosphoglycolate phos 99.8 1E-19 2.2E-24 153.1 7.8 150 1-202 12-170 (272)
19 PRK10563 6-phosphogluconate ph 99.8 2E-19 4.4E-24 146.2 8.3 143 2-202 4-155 (221)
20 TIGR01990 bPGM beta-phosphoglu 99.8 2.7E-19 5.9E-24 141.1 8.4 146 4-202 1-154 (185)
21 PLN02940 riboflavin kinase 99.8 1.6E-19 3.4E-24 158.6 7.7 144 2-202 11-163 (382)
22 TIGR02253 CTE7 HAD superfamily 99.8 2.6E-19 5.6E-24 145.2 7.9 66 136-202 91-163 (221)
23 PRK13222 phosphoglycolate phos 99.8 3.1E-19 6.6E-24 145.0 8.2 148 2-202 6-162 (226)
24 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 2.1E-19 4.5E-24 144.0 6.4 155 3-202 1-174 (197)
25 TIGR01454 AHBA_synth_RP 3-amin 99.8 3.1E-19 6.8E-24 143.6 6.9 66 136-202 72-144 (205)
26 PRK09449 dUMP phosphatase; Pro 99.8 5.7E-19 1.2E-23 143.7 8.0 67 135-202 91-163 (224)
27 TIGR02252 DREG-2 REG-2-like, H 99.7 3.6E-18 7.7E-23 137.0 8.4 64 137-202 103-173 (203)
28 TIGR02254 YjjG/YfnB HAD superf 99.7 1.1E-17 2.3E-22 135.6 9.0 65 136-202 94-165 (224)
29 TIGR01428 HAD_type_II 2-haloal 99.7 2.7E-17 5.9E-22 131.5 10.0 65 137-202 90-161 (198)
30 PRK14988 GMP/IMP nucleotidase; 99.7 5.4E-17 1.2E-21 132.8 10.1 67 135-202 89-162 (224)
31 PHA02597 30.2 hypothetical pro 99.7 4.1E-17 9E-22 130.4 8.0 66 135-202 70-143 (197)
32 TIGR01993 Pyr-5-nucltdase pyri 99.7 9.1E-17 2E-21 127.1 9.8 65 137-202 82-154 (184)
33 PRK10748 flavin mononucleotide 99.7 8.2E-17 1.8E-21 132.8 9.3 61 136-202 110-176 (238)
34 PLN02919 haloacid dehalogenase 99.7 4.4E-17 9.6E-22 158.5 8.7 148 2-202 75-231 (1057)
35 PF13419 HAD_2: Haloacid dehal 99.7 4.7E-17 1E-21 125.7 6.1 66 136-202 74-146 (176)
36 PLN02779 haloacid dehalogenase 99.7 5E-16 1.1E-20 131.6 11.4 64 138-202 143-215 (286)
37 TIGR01493 HAD-SF-IA-v2 Haloaci 99.7 5E-17 1.1E-21 127.3 4.3 61 137-202 88-152 (175)
38 TIGR02247 HAD-1A3-hyp Epoxide 99.7 7.3E-17 1.6E-21 130.2 4.8 66 136-202 91-165 (211)
39 TIGR01549 HAD-SF-IA-v1 haloaci 99.6 2.1E-16 4.6E-21 121.3 6.2 64 137-202 62-131 (154)
40 PLN02811 hydrolase 99.6 3.7E-15 8.1E-20 121.3 6.1 66 136-202 75-150 (220)
41 TIGR01509 HAD-SF-IA-v3 haloaci 99.5 9.1E-14 2E-18 108.9 10.9 63 138-202 84-153 (183)
42 KOG2914 Predicted haloacid-hal 99.5 1.7E-14 3.8E-19 117.4 5.0 143 3-202 11-164 (222)
43 PRK09456 ?-D-glucose-1-phospha 99.5 2.7E-13 6E-18 108.6 10.3 64 139-202 84-154 (199)
44 PLN02954 phosphoserine phospha 99.5 1.8E-13 4E-18 111.2 8.5 64 138-202 83-167 (224)
45 COG1011 Predicted hydrolase (H 99.4 9E-13 2E-17 107.0 11.4 64 137-202 97-167 (229)
46 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.4 2.5E-13 5.4E-18 108.2 7.0 49 137-186 78-129 (201)
47 TIGR00338 serB phosphoserine p 99.4 5.4E-13 1.2E-17 108.1 8.6 65 137-202 83-164 (219)
48 PRK11590 hypothetical protein; 99.4 7.7E-13 1.7E-17 107.2 7.6 48 138-187 94-145 (211)
49 TIGR01672 AphA HAD superfamily 99.4 6.7E-13 1.5E-17 109.5 6.8 60 135-195 110-178 (237)
50 TIGR01489 DKMTPPase-SF 2,3-dik 99.3 9.5E-12 2.1E-16 97.9 10.9 63 138-201 71-160 (188)
51 PRK09552 mtnX 2-hydroxy-3-keto 99.3 7.1E-12 1.5E-16 102.0 7.8 40 136-177 71-113 (219)
52 PRK13582 thrH phosphoserine ph 99.2 9E-11 2E-15 94.0 11.0 65 136-202 65-140 (205)
53 TIGR01681 HAD-SF-IIIC HAD-supe 99.2 1.8E-11 3.9E-16 91.8 5.7 63 139-202 29-102 (128)
54 TIGR01685 MDP-1 magnesium-depe 99.1 4.8E-11 1E-15 94.1 5.3 54 135-189 41-107 (174)
55 TIGR03333 salvage_mtnX 2-hydro 99.0 3E-09 6.5E-14 86.3 9.4 58 137-195 68-135 (214)
56 TIGR01662 HAD-SF-IIIA HAD-supe 99.0 8.6E-10 1.9E-14 82.5 5.5 61 139-202 25-98 (132)
57 TIGR01691 enolase-ppase 2,3-di 99.0 5.5E-09 1.2E-13 85.4 9.8 74 127-202 84-165 (220)
58 TIGR01545 YfhB_g-proteo haloac 98.9 8.2E-09 1.8E-13 83.8 10.6 47 138-186 93-143 (210)
59 TIGR01664 DNA-3'-Pase DNA 3'-p 98.9 4.5E-09 9.7E-14 82.3 8.5 62 139-203 42-122 (166)
60 PRK11133 serB phosphoserine ph 98.9 6E-09 1.3E-13 89.7 10.0 65 137-202 179-260 (322)
61 TIGR01488 HAD-SF-IB Haloacid D 98.9 1.4E-08 3.1E-13 79.2 11.1 65 136-201 70-153 (177)
62 TIGR01656 Histidinol-ppas hist 98.9 1.5E-09 3.2E-14 83.1 5.2 63 139-202 27-114 (147)
63 TIGR01684 viral_ppase viral ph 98.9 3.9E-09 8.4E-14 88.9 7.8 40 149-189 159-198 (301)
64 PRK08942 D,D-heptose 1,7-bisph 98.9 4.6E-09 9.9E-14 83.0 7.8 62 138-202 28-116 (181)
65 TIGR02137 HSK-PSP phosphoserin 98.9 1.8E-08 3.9E-13 81.4 10.1 43 137-181 66-111 (203)
66 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.9 5.9E-08 1.3E-12 77.5 13.1 44 138-182 86-132 (202)
67 TIGR00213 GmhB_yaeD D,D-heptos 98.8 2.1E-08 4.5E-13 79.0 9.0 62 138-202 25-119 (176)
68 KOG3085 Predicted hydrolase (H 98.8 3.4E-09 7.3E-14 87.0 4.6 64 137-202 111-181 (237)
69 PRK11009 aphA acid phosphatase 98.8 3E-08 6.5E-13 81.9 8.3 54 135-189 110-172 (237)
70 PHA03398 viral phosphatase sup 98.7 3.4E-08 7.5E-13 83.3 7.5 40 149-189 161-200 (303)
71 TIGR01686 FkbH FkbH-like domai 98.7 2.5E-08 5.4E-13 85.8 6.0 62 139-202 31-99 (320)
72 PF06888 Put_Phosphatase: Puta 98.7 1.3E-07 2.9E-12 77.8 9.4 50 136-186 68-122 (234)
73 COG0560 SerB Phosphoserine pho 98.7 1.3E-07 2.9E-12 76.9 8.9 48 138-186 76-126 (212)
74 PRK08238 hypothetical protein; 98.6 4.7E-07 1E-11 81.9 11.6 48 138-189 71-121 (479)
75 cd01427 HAD_like Haloacid deha 98.6 2.3E-07 5E-12 67.9 7.8 64 138-202 23-109 (139)
76 KOG3109 Haloacid dehalogenase- 98.6 4.3E-07 9.4E-12 73.1 9.2 64 137-201 98-172 (244)
77 TIGR01663 PNK-3'Pase polynucle 98.5 3.6E-07 7.8E-12 83.3 8.9 60 140-202 198-276 (526)
78 PF00702 Hydrolase: haloacid d 98.5 2.3E-07 5.1E-12 74.1 6.1 61 138-202 126-191 (215)
79 TIGR01533 lipo_e_P4 5'-nucleot 98.5 1.4E-06 2.9E-11 73.2 10.6 66 136-202 115-188 (266)
80 PRK05446 imidazole glycerol-ph 98.4 7.9E-07 1.7E-11 77.5 8.3 63 137-202 28-117 (354)
81 TIGR01261 hisB_Nterm histidino 98.4 8.7E-07 1.9E-11 69.0 6.4 63 137-202 27-116 (161)
82 PF12689 Acid_PPase: Acid Phos 98.2 1.7E-06 3.6E-11 67.9 5.1 63 136-200 42-118 (169)
83 smart00577 CPDc catalytic doma 98.2 1.3E-06 2.7E-11 67.0 4.1 65 136-202 42-111 (148)
84 PRK06769 hypothetical protein; 98.2 3E-06 6.6E-11 66.6 5.5 64 138-202 27-106 (173)
85 PHA02530 pseT polynucleotide k 97.9 1.6E-05 3.5E-10 67.4 5.5 65 137-202 185-264 (300)
86 TIGR01544 HAD-SF-IE haloacid d 97.9 0.0004 8.6E-09 58.7 13.6 47 136-183 118-167 (277)
87 KOG3120 Predicted haloacid deh 97.9 3.2E-05 7E-10 62.6 6.6 50 137-187 82-135 (256)
88 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.9 3.1E-06 6.8E-11 70.7 0.4 62 140-202 121-192 (257)
89 PLN02645 phosphoglycolate phos 97.9 3.3E-05 7.2E-10 66.2 6.8 48 139-187 44-97 (311)
90 PF12710 HAD: haloacid dehalog 97.8 7.5E-05 1.6E-09 58.6 7.0 36 142-178 92-130 (192)
91 PRK00192 mannosyl-3-phosphogly 97.8 5.1E-05 1.1E-09 63.7 6.0 31 149-180 34-64 (273)
92 KOG1615 Phosphoserine phosphat 97.6 0.00049 1.1E-08 54.8 9.2 65 135-200 84-169 (227)
93 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.6 0.00018 3.9E-09 59.7 6.6 37 149-186 30-69 (249)
94 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.6 9.1E-05 2E-09 61.1 4.6 53 136-189 21-79 (242)
95 TIGR01452 PGP_euk phosphoglyco 97.6 0.00018 3.9E-09 60.7 6.4 37 149-186 31-70 (279)
96 TIGR02244 HAD-IG-Ncltidse HAD 97.6 0.00017 3.8E-09 62.6 6.3 55 134-188 179-243 (343)
97 COG4996 Predicted phosphatase 97.6 0.00013 2.7E-09 54.6 4.5 49 137-186 39-90 (164)
98 TIGR02726 phenyl_P_delta pheny 97.4 0.0003 6.4E-09 55.3 5.1 51 146-202 44-94 (169)
99 TIGR01668 YqeG_hyp_ppase HAD s 97.4 0.00054 1.2E-08 53.6 6.4 59 137-202 41-104 (170)
100 PRK10444 UMP phosphatase; Prov 97.4 0.00042 9E-09 57.7 5.8 16 2-17 1-16 (248)
101 PRK10513 sugar phosphate phosp 97.3 0.00073 1.6E-08 56.3 7.1 29 149-178 33-61 (270)
102 smart00775 LNS2 LNS2 domain. T 97.2 0.0022 4.7E-08 49.7 7.8 31 142-172 30-66 (157)
103 TIGR01670 YrbI-phosphatas 3-de 97.2 0.00068 1.5E-08 52.2 5.0 53 144-202 36-88 (154)
104 TIGR02250 FCP1_euk FCP1-like p 97.2 0.00067 1.5E-08 52.5 4.9 53 136-189 55-111 (156)
105 COG0647 NagD Predicted sugar p 97.1 0.00049 1.1E-08 57.9 4.1 50 139-188 24-79 (269)
106 PF06941 NT5C: 5' nucleotidase 97.1 0.00075 1.6E-08 53.7 4.7 53 135-187 69-131 (191)
107 TIGR01456 CECR5 HAD-superfamil 97.1 0.00028 6.1E-09 60.8 2.3 14 4-17 2-15 (321)
108 PRK12702 mannosyl-3-phosphogly 97.0 0.0017 3.7E-08 55.2 5.8 30 149-179 31-60 (302)
109 COG4359 Uncharacterized conser 96.9 0.0076 1.6E-07 47.7 8.4 39 136-175 70-111 (220)
110 TIGR02461 osmo_MPG_phos mannos 96.8 0.0029 6.3E-08 51.8 5.9 30 149-179 28-57 (225)
111 TIGR01460 HAD-SF-IIA Haloacid 96.8 0.0034 7.3E-08 51.7 5.9 13 5-17 1-13 (236)
112 TIGR01675 plant-AP plant acid 96.7 0.017 3.7E-07 47.5 9.8 49 136-186 117-171 (229)
113 TIGR02463 MPGP_rel mannosyl-3- 96.6 0.0052 1.1E-07 49.6 5.7 28 149-177 29-56 (221)
114 PRK10976 putative hydrolase; P 96.5 0.002 4.3E-08 53.6 3.1 27 1-27 1-27 (266)
115 PRK15126 thiamin pyrimidine py 96.5 0.0021 4.5E-08 53.7 3.3 27 1-27 1-27 (272)
116 PRK01158 phosphoglycolate phos 96.5 0.002 4.3E-08 52.2 3.0 26 2-27 3-28 (230)
117 PLN02177 glycerol-3-phosphate 96.5 0.034 7.4E-07 50.8 11.2 37 140-177 111-147 (497)
118 TIGR01680 Veg_Stor_Prot vegeta 96.3 0.015 3.3E-07 48.9 6.9 49 135-185 141-195 (275)
119 PRK10530 pyridoxal phosphate ( 96.2 0.004 8.8E-08 51.7 3.1 27 1-27 2-28 (272)
120 TIGR01486 HAD-SF-IIB-MPGP mann 96.2 0.012 2.6E-07 48.7 5.8 29 150-179 30-58 (256)
121 PTZ00174 phosphomannomutase; P 96.0 0.0065 1.4E-07 50.3 3.2 25 2-26 5-29 (247)
122 PRK09484 3-deoxy-D-manno-octul 95.9 0.021 4.5E-07 45.2 5.8 49 148-202 60-108 (183)
123 TIGR01487 SPP-like sucrose-pho 95.9 0.0076 1.7E-07 48.5 3.2 49 153-202 108-159 (215)
124 TIGR02251 HIF-SF_euk Dullard-l 95.9 0.019 4.2E-07 44.5 5.3 51 138-189 41-94 (162)
125 PF05152 DUF705: Protein of un 95.8 0.041 8.8E-07 46.5 7.4 40 149-189 155-194 (297)
126 COG4229 Predicted enolase-phos 95.8 0.089 1.9E-06 41.8 8.8 34 137-170 101-137 (229)
127 PF13344 Hydrolase_6: Haloacid 95.8 0.015 3.2E-07 41.6 4.1 49 137-186 12-66 (101)
128 PLN02499 glycerol-3-phosphate 95.8 0.12 2.6E-06 47.0 10.8 33 144-177 101-133 (498)
129 COG0561 Cof Predicted hydrolas 95.7 0.0092 2E-07 49.5 3.0 28 1-28 2-29 (264)
130 TIGR01525 ATPase-IB_hvy heavy 95.6 0.018 3.9E-07 53.3 4.8 60 137-200 382-445 (556)
131 PLN02423 phosphomannomutase 95.4 0.014 3E-07 48.4 3.1 26 4-29 9-34 (245)
132 PF03767 Acid_phosphat_B: HAD 95.2 0.0095 2.1E-07 49.0 1.5 41 137-178 113-159 (229)
133 TIGR01512 ATPase-IB2_Cd heavy 95.2 0.026 5.6E-07 52.1 4.5 60 137-200 360-423 (536)
134 PLN02887 hydrolase family prot 95.1 0.02 4.2E-07 53.4 3.3 27 1-27 307-333 (580)
135 TIGR01482 SPP-subfamily Sucros 95.0 0.018 4E-07 46.3 2.6 48 154-202 109-161 (225)
136 TIGR01689 EcbF-BcbF capsule bi 94.7 0.017 3.7E-07 43.1 1.6 15 3-17 2-16 (126)
137 PRK03669 mannosyl-3-phosphogly 94.5 0.033 7.2E-07 46.6 3.1 24 2-25 7-30 (271)
138 COG0241 HisB Histidinol phosph 94.5 0.21 4.6E-06 39.6 7.4 62 139-203 31-119 (181)
139 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.4 0.0049 1.1E-07 50.8 -2.1 60 141-202 140-208 (242)
140 PF08282 Hydrolase_3: haloacid 94.1 0.043 9.3E-07 44.2 3.0 23 5-27 1-23 (254)
141 TIGR01670 YrbI-phosphatas 3-de 93.9 0.024 5.2E-07 43.5 1.0 16 2-17 1-16 (154)
142 PRK09484 3-deoxy-D-manno-octul 93.9 0.025 5.5E-07 44.7 1.1 15 2-16 21-35 (183)
143 TIGR00099 Cof-subfamily Cof su 93.9 0.05 1.1E-06 44.9 2.9 22 4-25 1-22 (256)
144 TIGR01511 ATPase-IB1_Cu copper 93.2 0.19 4.1E-06 46.7 5.7 57 138-200 404-464 (562)
145 PF03031 NIF: NLI interacting 92.3 0.05 1.1E-06 41.6 0.6 51 138-189 35-88 (159)
146 COG1778 Low specificity phosph 92.1 0.072 1.6E-06 41.2 1.2 17 1-17 7-23 (170)
147 TIGR01484 HAD-SF-IIB HAD-super 92.1 0.13 2.9E-06 40.7 2.9 14 4-17 1-14 (204)
148 PF13344 Hydrolase_6: Haloacid 91.8 0.078 1.7E-06 37.8 1.1 13 5-17 1-13 (101)
149 PF08645 PNK3P: Polynucleotide 91.6 0.081 1.8E-06 41.0 1.0 60 141-203 31-111 (159)
150 PF08235 LNS2: LNS2 (Lipin/Ned 91.5 1.5 3.3E-05 33.9 8.1 24 142-165 30-56 (157)
151 TIGR02726 phenyl_P_delta pheny 91.5 0.09 1.9E-06 41.2 1.2 16 2-17 7-22 (169)
152 TIGR01458 HAD-SF-IIA-hyp3 HAD- 91.2 0.21 4.5E-06 41.6 3.2 47 139-186 21-73 (257)
153 COG2179 Predicted hydrolase of 90.6 1 2.3E-05 35.2 6.3 56 140-201 47-105 (175)
154 TIGR01522 ATPase-IIA2_Ca golgi 90.2 0.59 1.3E-05 45.9 5.7 47 139-186 528-577 (884)
155 TIGR01452 PGP_euk phosphoglyco 90.2 0.028 6E-07 47.4 -3.0 61 140-202 144-215 (279)
156 PRK14502 bifunctional mannosyl 89.9 0.27 5.9E-06 46.5 3.0 23 2-24 416-438 (694)
157 PRK10187 trehalose-6-phosphate 89.1 0.2 4.2E-06 42.0 1.3 13 4-16 16-28 (266)
158 TIGR00685 T6PP trehalose-phosp 88.8 0.19 4.2E-06 41.3 1.2 15 3-17 4-18 (244)
159 PF05761 5_nucleotid: 5' nucle 87.7 0.75 1.6E-05 41.6 4.2 49 139-187 183-242 (448)
160 TIGR02471 sucr_syn_bact_C sucr 87.6 0.27 5.7E-06 40.1 1.2 17 4-20 1-17 (236)
161 COG2503 Predicted secreted aci 87.2 2.3 5E-05 35.4 6.4 44 136-180 119-169 (274)
162 TIGR01261 hisB_Nterm histidino 87.2 0.091 2E-06 40.8 -1.7 15 3-17 2-16 (161)
163 PF03031 NIF: NLI interacting 86.1 1 2.2E-05 34.2 3.7 15 3-17 1-15 (159)
164 TIGR01485 SPP_plant-cyano sucr 84.5 0.99 2.1E-05 37.1 3.1 13 190-202 167-179 (249)
165 smart00577 CPDc catalytic doma 82.4 0.76 1.7E-05 34.8 1.5 15 3-17 3-17 (148)
166 COG1877 OtsB Trehalose-6-phosp 82.2 0.69 1.5E-05 39.0 1.3 15 3-17 19-33 (266)
167 PRK10671 copA copper exporting 82.1 1.3 2.9E-05 43.1 3.4 57 138-199 649-709 (834)
168 PF08645 PNK3P: Polynucleotide 81.5 1.4 3.1E-05 34.0 2.7 15 3-17 1-15 (159)
169 TIGR02245 HAD_IIID1 HAD-superf 80.9 0.85 1.8E-05 36.6 1.3 15 3-17 22-36 (195)
170 PRK14501 putative bifunctional 79.6 0.89 1.9E-05 43.6 1.3 14 3-16 493-506 (726)
171 PLN02205 alpha,alpha-trehalose 79.5 1 2.2E-05 44.0 1.6 17 1-17 595-611 (854)
172 COG0731 Fe-S oxidoreductases [ 78.9 7.6 0.00017 33.2 6.5 43 137-186 90-136 (296)
173 PLN02580 trehalose-phosphatase 78.1 1.1 2.4E-05 39.8 1.3 18 190-207 364-381 (384)
174 PLN02151 trehalose-phosphatase 77.9 1.7 3.6E-05 38.2 2.3 18 190-207 332-349 (354)
175 PLN03017 trehalose-phosphatase 77.5 1.2 2.5E-05 39.3 1.2 18 190-207 346-363 (366)
176 PF09419 PGP_phosphatase: Mito 76.8 1.3 2.8E-05 34.7 1.2 16 2-17 41-56 (168)
177 TIGR01668 YqeG_hyp_ppase HAD s 75.1 1.8 3.9E-05 33.6 1.6 16 2-17 25-40 (170)
178 PRK11033 zntA zinc/cadmium/mer 74.7 4.5 9.9E-05 39.0 4.5 54 139-199 568-626 (741)
179 KOG2134 Polynucleotide kinase 74.6 1.5 3.3E-05 38.7 1.2 15 3-17 76-90 (422)
180 TIGR02251 HIF-SF_euk Dullard-l 73.1 2.1 4.5E-05 33.1 1.5 15 3-17 2-16 (162)
181 PF02358 Trehalose_PPase: Treh 72.5 1.7 3.7E-05 35.4 1.0 13 6-18 1-13 (235)
182 PRK06769 hypothetical protein; 72.3 2.1 4.5E-05 33.3 1.3 14 2-15 4-17 (173)
183 PF05116 S6PP: Sucrose-6F-phos 71.9 3.4 7.3E-05 34.2 2.6 15 3-17 3-17 (247)
184 KOG2882 p-Nitrophenyl phosphat 69.2 2.3 5E-05 36.3 1.0 15 3-17 23-37 (306)
185 TIGR01487 SPP-like sucrose-pho 68.1 8.3 0.00018 30.7 4.1 39 140-179 19-60 (215)
186 PLN02382 probable sucrose-phos 67.8 2.8 6E-05 37.5 1.3 14 4-17 11-24 (413)
187 PRK01158 phosphoglycolate phos 67.4 7.9 0.00017 30.9 3.9 40 140-180 21-63 (230)
188 COG3769 Predicted hydrolase (H 67.4 3 6.6E-05 34.3 1.3 15 1-15 6-20 (274)
189 COG2179 Predicted hydrolase of 67.3 3 6.4E-05 32.7 1.2 14 2-15 28-41 (175)
190 PF11019 DUF2608: Protein of u 65.7 37 0.0008 28.2 7.6 30 142-171 84-116 (252)
191 PRK13762 tRNA-modifying enzyme 65.3 42 0.00091 29.0 8.1 53 139-198 142-198 (322)
192 COG5663 Uncharacterized conser 65.2 14 0.0003 29.2 4.5 14 4-17 8-21 (194)
193 PLN02645 phosphoglycolate phos 65.1 0.96 2.1E-05 38.7 -2.1 50 152-202 186-243 (311)
194 TIGR00099 Cof-subfamily Cof su 64.4 10 0.00022 31.0 4.0 39 140-179 17-58 (256)
195 TIGR02250 FCP1_euk FCP1-like p 64.3 3.9 8.5E-05 31.4 1.4 16 3-18 7-22 (156)
196 COG3700 AphA Acid phosphatase 64.1 20 0.00042 28.7 5.2 44 149-194 127-174 (237)
197 KOG2882 p-Nitrophenyl phosphat 63.7 11 0.00023 32.4 4.0 40 137-177 36-81 (306)
198 COG1778 Low specificity phosph 63.2 10 0.00022 29.5 3.5 57 139-201 37-94 (170)
199 PTZ00445 p36-lilke protein; Pr 62.9 18 0.00039 29.5 5.0 61 141-202 77-174 (219)
200 COG5083 SMP2 Uncharacterized p 62.1 3.9 8.5E-05 36.9 1.1 15 3-17 376-390 (580)
201 PRK15126 thiamin pyrimidine py 61.7 13 0.00027 30.8 4.1 39 140-179 20-61 (272)
202 PRK10530 pyridoxal phosphate ( 61.5 16 0.00034 30.0 4.6 40 139-179 20-62 (272)
203 PLN03064 alpha,alpha-trehalose 60.5 4.4 9.5E-05 40.1 1.3 15 3-17 592-606 (934)
204 PLN03063 alpha,alpha-trehalose 59.8 4.5 9.8E-05 39.4 1.2 15 3-17 508-522 (797)
205 PRK10976 putative hydrolase; P 59.7 11 0.00025 30.9 3.5 38 141-179 21-61 (266)
206 PF08282 Hydrolase_3: haloacid 59.3 18 0.00039 28.6 4.5 38 140-178 16-56 (254)
207 TIGR01482 SPP-subfamily Sucros 58.4 17 0.00037 28.8 4.2 38 140-178 16-56 (225)
208 COG0561 Cof Predicted hydrolas 58.3 13 0.00028 30.5 3.6 39 140-179 21-62 (264)
209 PTZ00445 p36-lilke protein; Pr 57.8 4 8.7E-05 33.3 0.4 14 2-15 43-56 (219)
210 PRK03669 mannosyl-3-phosphogly 57.6 26 0.00056 29.0 5.3 35 142-177 27-64 (271)
211 PF09949 DUF2183: Uncharacteri 56.5 29 0.00062 24.7 4.6 39 164-206 53-92 (100)
212 TIGR02471 sucr_syn_bact_C sucr 54.9 24 0.00052 28.5 4.6 36 149-186 27-62 (236)
213 TIGR02244 HAD-IG-Ncltidse HAD 51.9 7.2 0.00016 34.1 1.1 16 2-17 12-27 (343)
214 TIGR01116 ATPase-IIA1_Ca sarco 51.9 23 0.00051 35.0 4.7 39 139-178 537-578 (917)
215 TIGR01497 kdpB K+-transporting 51.9 16 0.00035 34.9 3.5 40 139-179 446-488 (675)
216 TIGR02245 HAD_IIID1 HAD-superf 51.5 29 0.00063 27.8 4.4 38 139-177 45-84 (195)
217 smart00266 CAD Domains present 51.4 7.9 0.00017 26.1 1.0 14 4-17 40-53 (74)
218 cd06537 CIDE_N_B CIDE_N domain 51.1 8.1 0.00017 26.5 1.0 14 4-17 41-54 (81)
219 PF06189 5-nucleotidase: 5'-nu 51.1 16 0.00036 30.6 3.0 13 5-17 124-136 (264)
220 KOG3189 Phosphomannomutase [Li 50.1 7 0.00015 31.7 0.7 14 4-17 13-26 (252)
221 PRK01122 potassium-transportin 50.1 21 0.00046 34.2 4.0 39 139-178 445-486 (679)
222 TIGR01485 SPP_plant-cyano sucr 50.0 32 0.0007 28.0 4.7 35 149-185 34-68 (249)
223 cd06539 CIDE_N_A CIDE_N domain 49.8 8.8 0.00019 26.1 1.0 14 4-17 42-55 (78)
224 PRK14010 potassium-transportin 48.8 23 0.0005 33.9 4.0 40 139-179 441-483 (673)
225 COG0241 HisB Histidinol phosph 47.8 9.9 0.00021 30.2 1.2 16 3-18 6-21 (181)
226 TIGR01658 EYA-cons_domain eyes 47.1 35 0.00075 28.6 4.3 52 152-204 175-228 (274)
227 TIGR01456 CECR5 HAD-superfamil 46.7 15 0.00034 31.4 2.3 48 137-185 14-72 (321)
228 PF08620 RPAP1_C: RPAP1-like, 46.5 7.6 0.00016 26.1 0.3 10 5-14 3-12 (73)
229 cd01615 CIDE_N CIDE_N domain, 46.4 10 0.00023 25.8 1.0 14 4-17 42-55 (78)
230 PF09419 PGP_phosphatase: Mito 45.7 76 0.0016 24.8 5.8 57 139-202 59-127 (168)
231 PHA02530 pseT polynucleotide k 45.2 13 0.00027 31.3 1.5 15 3-17 159-173 (300)
232 TIGR01689 EcbF-BcbF capsule bi 45.0 75 0.0016 23.5 5.5 46 138-186 23-86 (126)
233 COG2217 ZntA Cation transport 44.5 31 0.00068 33.3 4.2 59 139-201 537-598 (713)
234 cd06536 CIDE_N_ICAD CIDE_N dom 44.2 12 0.00025 25.7 0.9 14 4-17 44-57 (80)
235 PF06117 DUF957: Enterobacteri 43.6 12 0.00026 24.3 0.9 15 3-17 25-39 (65)
236 COG4850 Uncharacterized conser 43.4 62 0.0013 28.3 5.4 36 136-172 193-232 (373)
237 COG4087 Soluble P-type ATPase 42.7 47 0.001 25.2 4.0 60 136-199 27-90 (152)
238 KOG4549 Magnesium-dependent ph 42.1 53 0.0012 24.7 4.2 42 138-180 43-88 (144)
239 TIGR01484 HAD-SF-IIB HAD-super 40.8 38 0.00082 26.5 3.6 34 139-172 17-53 (204)
240 PF02017 CIDE-N: CIDE-N domain 39.9 17 0.00038 24.7 1.3 13 5-17 43-55 (78)
241 PRK15122 magnesium-transportin 39.6 63 0.0014 32.1 5.6 38 139-177 550-590 (903)
242 PRK10517 magnesium-transportin 39.1 62 0.0013 32.1 5.4 38 139-177 550-590 (902)
243 PF05822 UMPH-1: Pyrimidine 5' 38.8 1.4E+02 0.0031 24.9 6.7 61 101-176 66-129 (246)
244 KOG2470 Similar to IMP-GMP spe 38.5 46 0.001 29.5 3.9 38 149-186 253-292 (510)
245 cd06538 CIDE_N_FSP27 CIDE_N do 38.1 16 0.00036 24.9 0.9 14 4-17 41-54 (79)
246 TIGR01524 ATPase-IIIB_Mg magne 37.8 87 0.0019 30.9 6.2 38 139-177 515-555 (867)
247 KOG1618 Predicted phosphatase 37.0 16 0.00034 31.8 0.9 15 4-18 37-51 (389)
248 TIGR01647 ATPase-IIIA_H plasma 36.4 55 0.0012 31.7 4.5 39 139-178 442-483 (755)
249 COG3882 FkbH Predicted enzyme 35.7 19 0.00042 33.0 1.2 13 2-14 222-234 (574)
250 TIGR01517 ATPase-IIB_Ca plasma 33.6 1.2E+02 0.0025 30.4 6.4 39 139-178 579-620 (941)
251 KOG2469 IMP-GMP specific 5'-nu 32.2 21 0.00046 31.9 0.9 13 2-14 27-39 (424)
252 KOG0207 Cation transport ATPas 32.1 1.5E+02 0.0033 29.4 6.6 58 139-201 723-784 (951)
253 PF06901 FrpC: RTX iron-regula 31.6 23 0.00049 28.6 0.9 18 3-20 59-76 (271)
254 KOG0202 Ca2+ transporting ATPa 30.8 1.4E+02 0.0031 29.6 6.1 42 139-181 584-628 (972)
255 PF05761 5_nucleotid: 5' nucle 30.5 25 0.00055 31.9 1.1 17 2-18 12-28 (448)
256 KOG1605 TFIIF-interacting CTD 30.0 29 0.00064 29.2 1.4 16 2-17 89-104 (262)
257 PRK14502 bifunctional mannosyl 29.4 79 0.0017 30.4 4.2 37 142-179 436-475 (694)
258 PTZ00174 phosphomannomutase; P 29.2 1.2E+02 0.0026 24.7 5.0 33 140-172 23-58 (247)
259 PF14824 Sirohm_synth_M: Siroh 28.8 91 0.002 17.1 2.7 22 151-172 3-24 (30)
260 COG4030 Uncharacterized protei 28.8 1.9E+02 0.0041 24.2 5.8 39 137-176 81-121 (315)
261 TIGR01106 ATPase-IIC_X-K sodiu 28.5 76 0.0016 31.9 4.2 38 139-177 568-608 (997)
262 COG0474 MgtA Cation transport 28.2 1.8E+02 0.004 28.9 6.7 49 139-188 547-600 (917)
263 KOG0323 TFIIF-interacting CTD 28.2 1.1E+02 0.0024 29.1 4.9 52 137-189 199-254 (635)
264 KOG2630 Enolase-phosphatase E- 28.1 1E+02 0.0022 25.6 4.1 45 127-172 112-159 (254)
265 PF04495 GRASP55_65: GRASP55/6 26.4 56 0.0012 24.6 2.2 30 174-203 59-90 (138)
266 TIGR01523 ATPase-IID_K-Na pota 26.0 1E+02 0.0022 31.2 4.5 39 139-178 646-687 (1053)
267 PF13021 DUF3885: Domain of un 25.4 63 0.0014 18.8 1.8 18 190-207 14-31 (38)
268 PLN02887 hydrolase family prot 24.5 1.2E+02 0.0025 28.7 4.4 36 141-177 327-365 (580)
269 COG4850 Uncharacterized conser 24.1 5E+02 0.011 22.9 9.6 62 139-204 237-303 (373)
270 COG3769 Predicted hydrolase (H 24.1 1.6E+02 0.0034 24.5 4.5 29 149-178 36-64 (274)
271 PRK10187 trehalose-6-phosphate 23.5 91 0.002 25.9 3.2 37 139-176 36-76 (266)
272 PF03387 Herpes_UL46: Herpesvi 23.4 5.7E+02 0.012 23.3 9.3 101 9-128 16-116 (444)
273 TIGR01652 ATPase-Plipid phosph 22.0 1.1E+02 0.0025 30.8 4.1 40 139-179 631-673 (1057)
274 KOG3040 Predicted sugar phosph 20.9 1.7E+02 0.0036 24.2 4.0 38 139-177 23-66 (262)
275 PRK13717 conjugal transfer pro 20.6 37 0.00081 25.3 0.3 11 3-13 46-56 (128)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.88 E-value=7.5e-23 Score=166.98 Aligned_cols=147 Identities=24% Similarity=0.325 Sum_probs=113.3
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCc
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPS 78 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 78 (208)
|.++||||+||||+||. +.+..+++.+++++|.+. .+.++.++|.+....+ ..+.+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~--~~~~~~~~-- 63 (220)
T COG0546 3 MIKAILFDLDGTLVDSA---------------EDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELI--ERLLGEAD-- 63 (220)
T ss_pred CCCEEEEeCCCccccCh---------------HHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHH--HHHhcccc--
Confidence 35899999999999999 666667777888888874 7888999999999988 77655320
Q ss_pred ccccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcE
Q 028496 79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (208)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l 155 (208)
.+ . .. .......+.+.+.|.+.. ...+|||+.++| +.+|+++
T Consensus 64 ----------~~----~----------------~~---~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l 108 (220)
T COG0546 64 ----------EE----A----------------AA---ELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKL 108 (220)
T ss_pred ----------ch----h----------------HH---HHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeE
Confidence 00 0 00 112223334444444332 468999999999 6899999
Q ss_pred EEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 156 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 156 ~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+|+||+++..++..|+++ |+.+||+.++|+++. |+|+++..+++++
T Consensus 109 ~i~T~k~~~~~~~~l~~~-gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~ 158 (220)
T COG0546 109 GIVTNKPERELDILLKAL-GLADYFDVIVGGDDVPPPKPDPEPLLLLLEKL 158 (220)
T ss_pred EEEeCCcHHHHHHHHHHh-CCccccceEEcCCCCCCCCcCHHHHHHHHHHh
Confidence 999999999999999995 999999999996555 8889999988874
No 2
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.87 E-value=1.5e-22 Score=166.00 Aligned_cols=145 Identities=24% Similarity=0.269 Sum_probs=106.6
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCc
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPS 78 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 78 (208)
|+++|||||||||+||. +.+..+++.+++++|.+. .+.++..+|.+...++ +...+.
T Consensus 11 ~~k~viFD~DGTL~Ds~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~~~~~~---- 69 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSA---------------PDMLATVNAMLAARGRAPITLAQLRPVVSKGARAML--AVAFPE---- 69 (229)
T ss_pred cCCEEEEcCcCccccCH---------------HHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHH--HHHhcc----
Confidence 78999999999999999 444455566667777653 5667777888877766 554331
Q ss_pred ccccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcE
Q 028496 79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (208)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l 155 (208)
.+.. . .++ ..+.+.+.|.........++||+.++| ++.|+++
T Consensus 70 ---------~~~~----~---------------~~~-------~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~l 114 (229)
T PRK13226 70 ---------LDAA----A---------------RDA-------LIPEFLQRYEALIGTQSQLFDGVEGMLQRLECAGCVW 114 (229)
T ss_pred ---------CChH----H---------------HHH-------HHHHHHHHHHHhhhhcCeeCCCHHHHHHHHHHCCCeE
Confidence 0100 0 122 222233333333344678999999999 6789999
Q ss_pred EEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 156 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 156 ~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+|+||++...+...++++ |+..+|+.+++++++ |+|+++.++++++
T Consensus 115 ~i~Tn~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l 164 (229)
T PRK13226 115 GIVTNKPEYLARLILPQL-GWEQRCAVLIGGDTLAERKPHPLPLLVAAERI 164 (229)
T ss_pred EEECCCCHHHHHHHHHHc-CchhcccEEEecCcCCCCCCCHHHHHHHHHHh
Confidence 999999999999999995 999999999998764 9999999999875
No 3
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.87 E-value=2.5e-22 Score=166.62 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=101.1
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHH----H-Hh-hhcCcccchhHHHHHHHHHHhh
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVD----Q-MH-ILRPVVETGYENLLLVRLLLEI 74 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~----~-~~-~~~~~~g~~~~~~~~~~~~~~~ 74 (208)
|.++|||||||||+||. +.+..+++++++++|.+ . .+ ..+.++|.+...++ +.+++.
T Consensus 21 ~~k~viFDlDGTLiDs~---------------~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~--~~~~~~ 83 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSD---------------PLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIA--LGLFPD 83 (248)
T ss_pred ccCEEEEcCCCccCcCH---------------HHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHH--HHHcCc
Confidence 35899999999999999 33344445555566532 2 23 24566787777766 555431
Q ss_pred cCCcccccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhC
Q 028496 75 RMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFA 151 (208)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~ 151 (208)
. . +. ..++.. .+.+.|.........+|||+.++| +++
T Consensus 84 ~-----------------~-~~---------------~~~~~~-------~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~ 123 (248)
T PLN02770 84 D-----------------L-ER---------------GLKFTD-------DKEALFRKLASEQLKPLNGLYKLKKWIEDR 123 (248)
T ss_pred c-----------------h-hh---------------HHHHHH-------HHHHHHHHHHHhcCCcCccHHHHHHHHHHc
Confidence 0 0 00 011111 122223322344678999999999 678
Q ss_pred CCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 152 SSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 152 g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
|++++|+||+++..++..|+++ |+.+||+.+++++++ |+|++++.+++++
T Consensus 124 g~~l~I~Tn~~~~~~~~~l~~~-gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~ 177 (248)
T PLN02770 124 GLKRAAVTNAPRENAELMISLL-GLSDFFQAVIIGSECEHAKPHPDPYLKALEVL 177 (248)
T ss_pred CCeEEEEeCCCHHHHHHHHHHc-CChhhCcEEEecCcCCCCCCChHHHHHHHHHh
Confidence 9999999999999999999994 999999999999876 9999999999985
No 4
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.87 E-value=2.5e-22 Score=162.64 Aligned_cols=141 Identities=16% Similarity=0.149 Sum_probs=98.1
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCc
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPS 78 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 78 (208)
|.++|||||||||+||.. .+.. +++++++++|.+. .+++...+|.+....+ +.+.+
T Consensus 2 ~~~~viFD~DGTL~ds~~-~~~~--------------a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~--~~~~~----- 59 (214)
T PRK13288 2 KINTVLFDLDGTLINTNE-LIIS--------------SFLHTLKTYYPNQYKREDVLPFIGPSLHDTF--SKIDE----- 59 (214)
T ss_pred CccEEEEeCCCcCccCHH-HHHH--------------HHHHHHHHhCCCCCCHHHHHHHhCcCHHHHH--HhcCH-----
Confidence 368999999999999992 2223 3333444444321 3445566676666555 33211
Q ss_pred ccccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcE
Q 028496 79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (208)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l 155 (208)
+ . .+++.+.|.+. |.........++||+.++| +++|+++
T Consensus 60 ------------~----~---------------~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~l~~L~~~g~~~ 101 (214)
T PRK13288 60 ------------S----K---------------VEEMITTYREF-------NHEHHDELVTEYETVYETLKTLKKQGYKL 101 (214)
T ss_pred ------------H----H---------------HHHHHHHHHHH-------HHHhhhhhcccCcCHHHHHHHHHHCCCeE
Confidence 0 0 22222333322 2222234578999999999 5789999
Q ss_pred EEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 156 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 156 ~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+|+||+++..+...++.+ |+.+||+.+++++++ |+|+++.++++++
T Consensus 102 ~i~S~~~~~~~~~~l~~~-gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~ 151 (214)
T PRK13288 102 GIVTTKMRDTVEMGLKLT-GLDEFFDVVITLDDVEHAKPDPEPVLKALELL 151 (214)
T ss_pred EEEeCCCHHHHHHHHHHc-CChhceeEEEecCcCCCCCCCcHHHHHHHHHc
Confidence 999999999999999995 999999999999776 9999999999885
No 5
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.86 E-value=1.6e-21 Score=161.84 Aligned_cols=159 Identities=12% Similarity=0.081 Sum_probs=104.0
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCccc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (208)
.++|||||||||+||....+.. +++.+++++|.+. .++++..+|.+....+ +.+....
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~--------------a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~--~~~~~~~----- 60 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQ--------------AFVEAFAEFGVQITLEEARGPMGLGKWDHI--RALLKMP----- 60 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHH--------------HHHHHHHHcCCCccHHHHHHhcCccHHHHH--HHHhcCH-----
Confidence 4789999999999997322222 3344445555543 4455666787766655 4432210
Q ss_pred ccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEE
Q 028496 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~I 157 (208)
+. ...+.+.+|....+ ....+.++.+.+.|.........++||+.++| +++|++++|
T Consensus 61 -----------~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~I 120 (253)
T TIGR01422 61 -----------AV-------AERWRAKFGRLPTE--ADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGS 120 (253)
T ss_pred -----------HH-------HHHHHHHhCCCCCH--HHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEE
Confidence 00 11122233332110 11122333333333333345679999999999 578999999
Q ss_pred EcCCcHHHHHHHHHhhCCCCCCC-CeEEeCCCC----CCHHHHHHHHHHh
Q 028496 158 VTTKQSRFADALLRELAGVTIPP-DRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 158 vTn~~~~~~~~~L~~~~gl~~~F-~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+||+++..++.+++++ |+..+| +.|+|++++ |+|+++..+++++
T Consensus 121 vT~~~~~~~~~~l~~~-gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l 169 (253)
T TIGR01422 121 TTGYTREMMDVVAPEA-ALQGYRPDYNVTTDDVPAGRPAPWMALKNAIEL 169 (253)
T ss_pred ECCCcHHHHHHHHHHH-HhcCCCCceEEccccCCCCCCCHHHHHHHHHHc
Confidence 9999999999999995 999996 899999875 9999999999885
No 6
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.86 E-value=9.1e-22 Score=164.52 Aligned_cols=146 Identities=14% Similarity=0.063 Sum_probs=103.5
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCcc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 79 (208)
.|+|||||||||+||+..++..+|+ .+++++|++. .+.++.++|.+....+ +.+++..
T Consensus 24 ~k~vIFDlDGTLvDS~~~~~~~a~~--------------~~~~~~G~~~~~~e~~~~~~G~~~~~~~--~~l~~~~---- 83 (260)
T PLN03243 24 WLGVVLEWEGVIVEDDSELERKAWR--------------ALAEEEGKRPPPAFLLKRAEGMKNEQAI--SEVLCWS---- 83 (260)
T ss_pred ceEEEEeCCCceeCCchHHHHHHHH--------------HHHHHcCCCCCHHHHHHHhcCCCHHHHH--HHHhccC----
Confidence 3789999999999998444444443 3445556543 3445678898888887 7665421
Q ss_pred cccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEE
Q 028496 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIY 156 (208)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~ 156 (208)
.+.+. .+++.+.+...+.. .......+|||+.++| ++.|++++
T Consensus 84 --------~~~~~-------------------~~~l~~~~~~~~~~-------~~~~~~~l~pg~~e~L~~L~~~g~~l~ 129 (260)
T PLN03243 84 --------RDFLQ-------------------MKRLAIRKEDLYEY-------MQGGLYRLRPGSREFVQALKKHEIPIA 129 (260)
T ss_pred --------CCHHH-------------------HHHHHHHHHHHHHH-------HHccCcccCCCHHHHHHHHHHCCCEEE
Confidence 01000 12222222222211 1134578999999999 57899999
Q ss_pred EEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 157 IVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 157 IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
|+||++...++..++++ |+..||+.+++++++ |+|++++.++++.
T Consensus 130 I~Tn~~~~~~~~~l~~~-gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l 178 (260)
T PLN03243 130 VASTRPRRYLERAIEAV-GMEGFFSVVLAAEDVYRGKPDPEMFMYAAERL 178 (260)
T ss_pred EEeCcCHHHHHHHHHHc-CCHhhCcEEEecccCCCCCCCHHHHHHHHHHh
Confidence 99999999999999995 999999999999876 9999999999874
No 7
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.85 E-value=3.7e-21 Score=161.12 Aligned_cols=159 Identities=11% Similarity=0.064 Sum_probs=103.7
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCccc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (208)
.|+|||||||||+||....+..+ ++.+++++|.+. .++++..+|.+....+ +.+....
T Consensus 4 ~k~vIFDlDGTLiDs~~~~~~~a--------------~~~~~~~~g~~~~~~~~~~~~G~~~~~~~--~~~~~~~----- 62 (267)
T PRK13478 4 IQAVIFDWAGTTVDFGSFAPTQA--------------FVEAFAQFGVEITLEEARGPMGLGKWDHI--RALLKMP----- 62 (267)
T ss_pred eEEEEEcCCCCeecCCCccHHHH--------------HHHHHHHcCCCCCHHHHHHhcCCCHHHHH--HHHHhcH-----
Confidence 48999999999999973222233 344455555543 4455666787766655 5443210
Q ss_pred ccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEE
Q 028496 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~I 157 (208)
.+.. .+.+.+|.+... ....+.++.+.+.|.........++||+.++| +++|++++|
T Consensus 63 -----------~~~~-------~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I 122 (267)
T PRK13478 63 -----------RVAA-------RWQAVFGRLPTE--ADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGS 122 (267)
T ss_pred -----------HHHH-------HHHHHhCCCCCH--HHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 0011 111223322110 11122333334444444455678999999999 678999999
Q ss_pred EcCCcHHHHHHHHHhhCCCCCCC-CeEEeCCCC----CCHHHHHHHHHHh
Q 028496 158 VTTKQSRFADALLRELAGVTIPP-DRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 158 vTn~~~~~~~~~L~~~~gl~~~F-~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+||+++..+..+++.+ |+..+| +.|++++++ |+|++++.+++++
T Consensus 123 ~T~~~~~~~~~~l~~~-~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l 171 (267)
T PRK13478 123 TTGYTREMMDVVVPLA-AAQGYRPDHVVTTDDVPAGRPYPWMALKNAIEL 171 (267)
T ss_pred EcCCcHHHHHHHHHHH-hhcCCCceEEEcCCcCCCCCCChHHHHHHHHHc
Confidence 9999999999999995 998885 899999775 9999999999885
No 8
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.85 E-value=5.7e-21 Score=155.09 Aligned_cols=146 Identities=16% Similarity=0.193 Sum_probs=102.1
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcC-cccchhHHHHHHHHHHhhcCCcc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRP-VVETGYENLLLVRLLLEIRMPSI 79 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~ 79 (208)
.|+|||||||||+||. +.+..+++.+++++|.+. .++... +.|.+...++ +.+.+..
T Consensus 1 ~k~iiFD~DGTL~ds~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~~~~~~~---- 59 (220)
T TIGR03351 1 ISLVVLDMAGTTVDED---------------GLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAI--RALLALD---- 59 (220)
T ss_pred CcEEEEecCCCeeccC---------------chHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHH--HHHHhcc----
Confidence 4789999999999999 444444455555556543 333333 6787777777 6665432
Q ss_pred cccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhc-cCCCCCCCHHHHH---HhCCCcE
Q 028496 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWI-GANRFYPGIPDAL---KFASSRI 155 (208)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~-~~~~~~pgv~e~L---~~~g~~l 155 (208)
|.+... .+++.+ .+.+.|...+. ...+++||+.++| +++|+++
T Consensus 60 -------~~~~~~-------------------~~~~~~-------~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~ 106 (220)
T TIGR03351 60 -------GADEAE-------------------AQAAFA-------DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKV 106 (220)
T ss_pred -------CCCHHH-------------------HHHHHH-------HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEE
Confidence 211110 122222 22222222222 3468999999999 5789999
Q ss_pred EEEcCCcHHHHHHHHHhhCCCC--CCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 156 YIVTTKQSRFADALLRELAGVT--IPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 156 ~IvTn~~~~~~~~~L~~~~gl~--~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+|+||+++..+...|+++ |+. .+|+.++++++. |+|++++.++++.
T Consensus 107 ~ivT~~~~~~~~~~l~~~-~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~ 158 (220)
T TIGR03351 107 ALTTGFDRDTAERLLEKL-GWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELT 158 (220)
T ss_pred EEEeCCchHHHHHHHHHh-hhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHc
Confidence 999999999999999995 999 999999999775 9999999999874
No 9
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.84 E-value=2.1e-21 Score=156.54 Aligned_cols=145 Identities=18% Similarity=0.168 Sum_probs=100.1
Q ss_pred eeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCccccc
Q 028496 5 YALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (208)
Q Consensus 5 viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (208)
|||||||||+||... +..+++.+++++|.+. .+.+...+|.+....+ +.+++..+.
T Consensus 1 viFD~DGTL~Ds~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~----- 58 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD---------------IAAAVNMALAALGLPPATLARVIGFIGNGVPVLM--ERVLAWAGQ----- 58 (213)
T ss_pred CeecCCCccccCHHH---------------HHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHH--HHHhhcccc-----
Confidence 699999999999932 2233344444555532 4455566777776666 655442110
Q ss_pred ccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEEEc
Q 028496 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVT 159 (208)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~IvT 159 (208)
..+.+ . .+ +..+.+.+.|.........++||+.++| +++|++++|+|
T Consensus 59 ----~~~~~----~---------------~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S 108 (213)
T TIGR01449 59 ----EPDAQ----R---------------VA-------ELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVT 108 (213)
T ss_pred ----ccChH----H---------------HH-------HHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEe
Confidence 00100 0 11 2233333444444445678999999999 57899999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 160 TKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 160 n~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
|+++..++..++++ |+..+|+.++|++++ |+|+++.++++++
T Consensus 109 ~~~~~~~~~~l~~~-~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~ 154 (213)
T TIGR01449 109 NKPTPLARPLLELL-GLAKYFSVLIGGDSLAQRKPHPDPLLLAAERL 154 (213)
T ss_pred CCCHHHHHHHHHHc-CcHhhCcEEEecCCCCCCCCChHHHHHHHHHc
Confidence 99999999999995 999999999999775 8999999999885
No 10
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.84 E-value=3.2e-21 Score=167.94 Aligned_cols=145 Identities=12% Similarity=0.020 Sum_probs=105.5
Q ss_pred ceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCccc
Q 028496 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (208)
Q Consensus 3 ~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (208)
++|||||||||+||...++..+|... ++++|.+. .+.++.++|.+...++ +.+++..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l--------------~~e~G~~~~~~e~~~~~~G~~~~~~l--~~ll~~~----- 190 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTL--------------AQEEGKSPPPAFILRRVEGMKNEQAI--SEVLCWS----- 190 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHH--------------HHHcCCCCCHHHHHHHhcCCCHHHHH--HHHhhcc-----
Confidence 78999999999999954555555443 33455543 3445778898888887 7765421
Q ss_pred ccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEE
Q 028496 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~I 157 (208)
.++.. .+++.+ .+.+.|.+.......++||+.++| ++.|++++|
T Consensus 191 -------~~~~~-------------------~e~l~~-------~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaI 237 (381)
T PLN02575 191 -------RDPAE-------------------LRRMAT-------RKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMAL 237 (381)
T ss_pred -------CCHHH-------------------HHHHHH-------HHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEE
Confidence 01110 122222 223333333345578999999999 678999999
Q ss_pred EcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 158 VTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 158 vTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+||+++..++.+++++ ||.+||+.|++++++ |+|++++.++++.
T Consensus 238 aSn~~~~~~~~~L~~l-gL~~yFd~Iv~sddv~~~KP~Peifl~A~~~l 285 (381)
T PLN02575 238 VSTRPRKTLENAIGSI-GIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLL 285 (381)
T ss_pred EeCCCHHHHHHHHHHc-CCHHHceEEEecCcCCCCCCCHHHHHHHHHHc
Confidence 9999999999999995 999999999999876 9999999999874
No 11
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.83 E-value=1.8e-21 Score=159.04 Aligned_cols=146 Identities=18% Similarity=0.174 Sum_probs=100.8
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCcc
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 79 (208)
|.++|||||||||+||+ +....++.++++++|++. .+..+...|.+....+ +.+.....
T Consensus 1 ~~~avIFD~DGvLvDse---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~--~~~~~~~~--- 60 (221)
T COG0637 1 MIKAVIFDMDGTLVDSE---------------PLHARAWLEALKEYGIEISDEEIRELHGGGIARII--DLLRKLAA--- 60 (221)
T ss_pred CCcEEEEcCCCCcCcch---------------HHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHH--HHHHHHhc---
Confidence 67999999999999999 333333444566677665 5556666776555555 44433210
Q ss_pred cccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEE
Q 028496 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIY 156 (208)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~ 156 (208)
+... .+.....+.+ ++.. ........++||+.++| +++|++++
T Consensus 61 -------~~~~-------------------~~~~~~~~~~---~~~~-----~~~~~~~~~~pGv~~~l~~L~~~~i~~a 106 (221)
T COG0637 61 -------GEDP-------------------ADLAELERLL---YEAE-----ALELEGLKPIPGVVELLEQLKARGIPLA 106 (221)
T ss_pred -------CCcc-------------------cCHHHHHHHH---HHHH-----HhhhcCCCCCccHHHHHHHHHhcCCcEE
Confidence 0000 0001101111 1111 11245679999999999 67789999
Q ss_pred EEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHH
Q 028496 157 IVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILL 201 (208)
Q Consensus 157 IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~ 201 (208)
++||+++..++..|+. +|+.+||+.+++++++ |+||+|+.+.++
T Consensus 107 vaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~ 154 (221)
T COG0637 107 VASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAER 154 (221)
T ss_pred EecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHH
Confidence 9999999999999999 5999999999998776 999999999887
No 12
>PRK11587 putative phosphatase; Provisional
Probab=99.83 E-value=1e-20 Score=153.89 Aligned_cols=143 Identities=17% Similarity=0.114 Sum_probs=98.5
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHHHhhhcCcccchhHHHHHHHHHHhhcCCccc
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (208)
|.|+|||||||||+||. +.+..+++.+++++|++..+..+.+.|.+....+ +.+.+.
T Consensus 2 ~~k~viFDlDGTL~Ds~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~--~~~~~~------ 58 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSL---------------PAVERAWSNWADRHGIAPDEVLNFIHGKQAITSL--RHFMAG------ 58 (218)
T ss_pred CCCEEEEcCCCCcCcCH---------------HHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHH--HHHhcc------
Confidence 35899999999999999 4444455556666776543333444577777666 655331
Q ss_pred ccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEE
Q 028496 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~I 157 (208)
.+ .+++.+.+... . .|.........+|||+.++| +++|++++|
T Consensus 59 -------~~----------------------~~~~~~~~~~~-~----~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i 104 (218)
T PRK11587 59 -------AS----------------------EAEIQAEFTRL-E----QIEATDTEGITALPGAIALLNHLNKLGIPWAI 104 (218)
T ss_pred -------CC----------------------cHHHHHHHHHH-H----HHHHhhhcCceeCcCHHHHHHHHHHcCCcEEE
Confidence 11 11222222211 1 11222245678999999999 678999999
Q ss_pred EcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 158 VTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 158 vTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+||++...+...++. .|+ .+|+.+++++++ |+|+++..+++++
T Consensus 105 vTn~~~~~~~~~l~~-~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~ 151 (218)
T PRK11587 105 VTSGSVPVASARHKA-AGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLL 151 (218)
T ss_pred EcCCCchHHHHHHHh-cCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHc
Confidence 999999888888999 498 568888888665 9999999999874
No 13
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.83 E-value=9.7e-21 Score=149.98 Aligned_cols=144 Identities=15% Similarity=0.126 Sum_probs=95.9
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCccc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (208)
.++|||||||||+||+ +....+++.+++++|.+. .+..+...|.+....+ +.+.+..
T Consensus 5 ~~~viFD~DGTLiDs~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~--~~~~~~~----- 62 (188)
T PRK10725 5 YAGLIFDMDGTILDTE---------------PTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIA--QAIIELN----- 62 (188)
T ss_pred ceEEEEcCCCcCccCH---------------HHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHH--HHHHHHh-----
Confidence 3789999999999999 333333444455555543 3445666777666665 5554421
Q ss_pred ccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH-H-hCCCcEEEE
Q 028496 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL-K-FASSRIYIV 158 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L-~-~~g~~l~Iv 158 (208)
+.+ .+.+++...+...+ .........++||+ ++| . +.+++++|+
T Consensus 63 ------~~~--------------------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-e~L~~L~~~~~l~I~ 108 (188)
T PRK10725 63 ------QAD--------------------LDPHALAREKTEAV-------KSMLLDSVEPLPLI-EVVKAWHGRRPMAVG 108 (188)
T ss_pred ------CCC--------------------CCHHHHHHHHHHHH-------HHHHhccCCCccHH-HHHHHHHhCCCEEEE
Confidence 100 01122222222221 12223456788974 777 2 335899999
Q ss_pred cCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 159 TTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 159 Tn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
||+++..++..|+++ |+.+||+.|++++++ |+|+++..+++++
T Consensus 109 T~~~~~~~~~~l~~~-~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~ 155 (188)
T PRK10725 109 TGSESAIAEALLAHL-GLRRYFDAVVAADDVQHHKPAPDTFLRCAQLM 155 (188)
T ss_pred cCCchHHHHHHHHhC-CcHhHceEEEehhhccCCCCChHHHHHHHHHc
Confidence 999999999999994 999999999999876 9999999999885
No 14
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.82 E-value=1.9e-20 Score=157.61 Aligned_cols=141 Identities=18% Similarity=0.160 Sum_probs=100.1
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCcc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 79 (208)
.+++||||||||+||+ +.+..+++++++++|.+. .+.+..++|.+...++ +.+
T Consensus 62 ~k~vIFDlDGTLiDS~---------------~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~--~~~-------- 116 (273)
T PRK13225 62 LQAIIFDFDGTLVDSL---------------PTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIV--RRA-------- 116 (273)
T ss_pred cCEEEECCcCccccCH---------------HHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHH--HHc--------
Confidence 4789999999999999 444444555566666643 4445666776665555 432
Q ss_pred cccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEE
Q 028496 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIY 156 (208)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~ 156 (208)
|.+++. .+++.+.+ .+.|.. .....+++||+.++| ++.|++++
T Consensus 117 -------~~~~~~-------------------~~~~~~~~-------~~~~~~-~~~~~~l~pg~~e~L~~L~~~gi~la 162 (273)
T PRK13225 117 -------GLSPWQ-------------------QARLLQRV-------QRQLGD-CLPALQLFPGVADLLAQLRSRSLCLG 162 (273)
T ss_pred -------CCCHHH-------------------HHHHHHHH-------HHHHHh-hcccCCcCCCHHHHHHHHHHCCCeEE
Confidence 111110 12222222 222222 234678999999999 57899999
Q ss_pred EEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHHHHh
Q 028496 157 IVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEILLW 202 (208)
Q Consensus 157 IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l~~~ 202 (208)
|+||+++..+...++++ |+.++|+.+++++.+ +||++++.++++.
T Consensus 163 IvSn~~~~~~~~~L~~~-gl~~~F~~vi~~~~~~~k~~~~~~~l~~~ 208 (273)
T PRK13225 163 ILSSNSRQNIEAFLQRQ-GLRSLFSVVQAGTPILSKRRALSQLVARE 208 (273)
T ss_pred EEeCCCHHHHHHHHHHc-CChhheEEEEecCCCCCCHHHHHHHHHHh
Confidence 99999999999999995 999999999998877 9999999998875
No 15
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.82 E-value=2.7e-20 Score=167.10 Aligned_cols=145 Identities=13% Similarity=0.191 Sum_probs=101.4
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHH------H-HHhhhcCcccchhHHHHHHHHHHh
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIV------D-QMHILRPVVETGYENLLLVRLLLE 73 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~------~-~~~~~~~~~g~~~~~~~~~~~~~~ 73 (208)
|.++|||||||||+||+ +.+..++++++++++. . +.+.++..+|.+....+ +.+.+
T Consensus 240 m~k~vIFDlDGTLiDs~---------------~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~--~~l~~ 302 (459)
T PRK06698 240 MLQALIFDMDGTLFQTD---------------KILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVW--EALLP 302 (459)
T ss_pred hhhheeEccCCceecch---------------hHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHH--HHHhh
Confidence 66899999999999999 4444444444444431 1 13456677888877777 66643
Q ss_pred hcCCcccccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhh-ccCCCCCCCHHHHH---H
Q 028496 74 IRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTW-IGANRFYPGIPDAL---K 149 (208)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~-~~~~~~~pgv~e~L---~ 149 (208)
.. + ... .+++.. .+.+.|..+. ....++|||+.++| +
T Consensus 303 ~~-----------~-------~~~--------------~~~~~~-------~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk 343 (459)
T PRK06698 303 DH-----------S-------LEI--------------REQTDA-------YFLERLIENIKSGKGALYPNVKEIFTYIK 343 (459)
T ss_pred hc-----------c-------hhH--------------HHHHHH-------HHHHHhHHHHhhcCCCcCCCHHHHHHHHH
Confidence 21 0 000 111111 2222222221 23578999999999 6
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC---CCHHHHHHHHHHh
Q 028496 150 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG---LVLSMLLGEILLW 202 (208)
Q Consensus 150 ~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~---PkPe~l~~~l~~~ 202 (208)
+.|++++|+||+++..+...++++ |+.+||+.+++++++ |||+++..+++++
T Consensus 344 ~~g~~l~IvS~~~~~~~~~~l~~~-~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l 398 (459)
T PRK06698 344 ENNCSIYIASNGLTEYLRAIVSYY-DLDQWVTETFSIEQINSLNKSDLVKSILNKY 398 (459)
T ss_pred HCCCeEEEEeCCchHHHHHHHHHC-CcHhhcceeEecCCCCCCCCcHHHHHHHHhc
Confidence 789999999999999999999995 999999999999876 8999999999864
No 16
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.81 E-value=2.5e-20 Score=151.80 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=60.5
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
.....+|||+.++| +++|++++|+||++...++..++++ |+..+|+.+++++.+ |+|++++.+++++
T Consensus 88 ~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 161 (222)
T PRK10826 88 EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF-DLRDYFDALASAEKLPYSKPHPEVYLNCAAKL 161 (222)
T ss_pred hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC-cchhcccEEEEcccCCCCCCCHHHHHHHHHHc
Confidence 44578999999999 5789999999999999999999994 999999999999775 9999999999874
No 17
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.81 E-value=1e-19 Score=143.56 Aligned_cols=64 Identities=22% Similarity=0.157 Sum_probs=56.0
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
....++||+.++| ++.|++++|+||+ ..++..+++ .|+..+|+.++++++. |+|+++..++++.
T Consensus 85 ~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~ 155 (185)
T TIGR02009 85 TGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELL 155 (185)
T ss_pred cCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHc
Confidence 3578999999999 5779999999998 668899999 5999999999998765 8899999998874
No 18
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.80 E-value=1e-19 Score=153.06 Aligned_cols=150 Identities=25% Similarity=0.278 Sum_probs=104.2
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCc
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPS 78 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 78 (208)
|+|+|||||||||+||+ +.+..+++.+++++|.+. .+.++.++|.+...+. +.+++...
T Consensus 12 ~~k~viFDlDGTL~Ds~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~-- 72 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSV---------------PDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLV--RRALAGSI-- 72 (272)
T ss_pred cCCEEEEcCCCccccCH---------------HHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHH--HHHhcccc--
Confidence 67999999999999999 444444555666677653 4556678888877766 55543110
Q ss_pred ccccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcE
Q 028496 79 IRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRI 155 (208)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l 155 (208)
...++++.. .++ ..+.+.+.|... .....++||+.++| +..|+++
T Consensus 73 -----~~~~~~~~~-------------------~~~-------~~~~~~~~~~~~-~~~~~~~~g~~e~L~~Lk~~g~~l 120 (272)
T PRK13223 73 -----DHDGVDDEL-------------------AEQ-------ALALFMEAYADS-HELTVVYPGVRDTLKWLKKQGVEM 120 (272)
T ss_pred -----cccCCCHHH-------------------HHH-------HHHHHHHHHHhc-CcCCccCCCHHHHHHHHHHCCCeE
Confidence 000111100 111 222233333321 23468999999999 5789999
Q ss_pred EEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 156 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 156 ~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+|+||++...++..+++ .|+..+|+.+++++++ |+|++++.++++.
T Consensus 121 ~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~ 170 (272)
T PRK13223 121 ALITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMA 170 (272)
T ss_pred EEEECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHh
Confidence 99999999999999999 5999999999999765 8899999999874
No 19
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.79 E-value=2e-19 Score=146.19 Aligned_cols=143 Identities=8% Similarity=0.043 Sum_probs=95.9
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCcc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 79 (208)
.++|+||+||||+||. +....++++++.++|++. .+.+..+.|.+...++ +.+.+.
T Consensus 4 ~~~viFD~DGTL~d~~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~--~~~~~~----- 61 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE---------------VICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEII--DIISKE----- 61 (221)
T ss_pred CCEEEECCCCCCCCCh---------------HHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHH--HHHHHH-----
Confidence 4899999999999998 222233334445555433 2223445565555555 555432
Q ss_pred cccccCCCCCHHHHHHhhhhhhHHHHHhcCCC--HHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHHHhCCCcEEE
Q 028496 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSEN--RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYI 157 (208)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L~~~g~~l~I 157 (208)
+|.+ .+++.+.|.+.. .........++||+.++|+..+++++|
T Consensus 62 ----------------------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~gv~~~L~~L~~~~~i 106 (221)
T PRK10563 62 ----------------------------HGVTLAKAELEPVYRAEV-------ARLFDSELEPIAGANALLESITVPMCV 106 (221)
T ss_pred ----------------------------hCCCCCHHHHHHHHHHHH-------HHHHHccCCcCCCHHHHHHHcCCCEEE
Confidence 2221 222222222222 112234678999999999777899999
Q ss_pred EcCCcHHHHHHHHHhhCCCCCCCC-eEEeCCCC----CCHHHHHHHHHHh
Q 028496 158 VTTKQSRFADALLRELAGVTIPPD-RIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 158 vTn~~~~~~~~~L~~~~gl~~~F~-~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+||++...+...|++ +|+.++|+ .+++++++ |+|+++..++++.
T Consensus 107 vTn~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~ 155 (221)
T PRK10563 107 VSNGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAM 155 (221)
T ss_pred EeCCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHc
Confidence 999999999999999 49999996 67777554 9999999999874
No 20
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.79 E-value=2.7e-19 Score=141.08 Aligned_cols=146 Identities=16% Similarity=0.171 Sum_probs=93.7
Q ss_pred eeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCccccc
Q 028496 4 LYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIRKS 82 (208)
Q Consensus 4 ~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (208)
+|||||||||+||. +....+++++++.+|++. .+..+.+.|.+....+ +.+++..+.
T Consensus 1 ~iiFD~DGTL~ds~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~----- 58 (185)
T TIGR01990 1 AVIFDLDGVITDTA---------------EYHYLAWKALADELGIPFDEEFNESLKGVSREDSL--ERILDLGGK----- 58 (185)
T ss_pred CeEEcCCCccccCh---------------HHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHH--HHHHHhcCC-----
Confidence 58999999999999 333333344445555543 3344556677777666 666553210
Q ss_pred ccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEEEc
Q 028496 83 SVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVT 159 (208)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~IvT 159 (208)
..+++. .+++.+.+.+.+ .+.+.. .....++||+.++| +++|++++|+|
T Consensus 59 ----~~~~~~-------------------~~~~~~~~~~~~---~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s 110 (185)
T TIGR01990 59 ----KYSEEE-------------------KEELAERKNDYY---VELLKE--LTPADVLPGIKNLLDDLKKNNIKIALAS 110 (185)
T ss_pred ----CCCHHH-------------------HHHHHHHHHHHH---HHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEe
Confidence 011110 111222222222 211111 12358999999999 67899999999
Q ss_pred CCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 160 TKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 160 n~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
|+.. ....++++ |+..+|+.++++++. |+|+++..++++.
T Consensus 111 ~~~~--~~~~l~~~-~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~ 154 (185)
T TIGR01990 111 ASKN--APTVLEKL-GLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGL 154 (185)
T ss_pred CCcc--HHHHHHhc-CcHhhCcEEEehhhcCCCCCChHHHHHHHHHc
Confidence 9754 46789994 999999999998765 9999999999874
No 21
>PLN02940 riboflavin kinase
Probab=99.79 E-value=1.6e-19 Score=158.61 Aligned_cols=144 Identities=13% Similarity=0.067 Sum_probs=101.4
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCccc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (208)
.++|||||||||+||+ +.+..+++.+++++|.+. .++....+|.+....+ +.+++..
T Consensus 11 ik~VIFDlDGTLvDt~---------------~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~--~~~~~~~----- 68 (382)
T PLN02940 11 VSHVILDLDGTLLNTD---------------GIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAA--ATVVEDY----- 68 (382)
T ss_pred CCEEEECCcCcCCcCH---------------HHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHH--HHHHHHh-----
Confidence 4789999999999999 333334444555566544 4446677787777666 6555422
Q ss_pred ccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEE
Q 028496 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~I 157 (208)
|.+. +.+++.+.+.+.+. .. .....++||+.++| ++.|++++|
T Consensus 69 ------~~~~--------------------~~~~~~~~~~~~~~-------~~-~~~~~l~pGv~elL~~Lk~~g~~l~I 114 (382)
T PLN02940 69 ------GLPC--------------------STDEFNSEITPLLS-------EQ-WCNIKALPGANRLIKHLKSHGVPMAL 114 (382)
T ss_pred ------CCCC--------------------CHHHHHHHHHHHHH-------HH-HccCCCCcCHHHHHHHHHHCCCcEEE
Confidence 1110 12222222222221 11 23578999999999 688999999
Q ss_pred EcCCcHHHHHHHHH-hhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 158 VTTKQSRFADALLR-ELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 158 vTn~~~~~~~~~L~-~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+||+++..+...++ . .|+.++|+.+++++++ |+|++++.++++.
T Consensus 115 vTn~~~~~~~~~l~~~-~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~l 163 (382)
T PLN02940 115 ASNSPRANIEAKISCH-QGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRL 163 (382)
T ss_pred EeCCcHHHHHHHHHhc-cChHhhCCEEEehhhcCCCCCCHHHHHHHHHHc
Confidence 99999999999887 7 4999999999999876 9999999999875
No 22
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.79 E-value=2.6e-19 Score=145.23 Aligned_cols=66 Identities=21% Similarity=0.179 Sum_probs=59.4
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
....++||+.++| ++.|++++|+||++...+...++++ |+..+|+.+++++++ |+|++++.+++++
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 163 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL-GVRDFFDAVITSEEEGVEKPHPKIFYAALKRL 163 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC-ChHHhccEEEEeccCCCCCCCHHHHHHHHHHc
Confidence 3568999999999 5789999999999999999999995 999999999998766 8999999999885
No 23
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.79 E-value=3.1e-19 Score=145.03 Aligned_cols=148 Identities=25% Similarity=0.252 Sum_probs=101.5
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH--HhhhcCcccchhHHHHHHHHHHhhcCCcc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ--MHILRPVVETGYENLLLVRLLLEIRMPSI 79 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 79 (208)
.++|+||+||||+||... +..+|.. +++++|.+. .+.++.++|.+...++ +.+++..++
T Consensus 6 ~~~iiFD~DGTL~d~~~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~-- 66 (226)
T PRK13222 6 IRAVAFDLDGTLVDSAPD-LAAAVNA--------------ALAALGLPPAGEERVRTWVGNGADVLV--ERALTWAGR-- 66 (226)
T ss_pred CcEEEEcCCcccccCHHH-HHHHHHH--------------HHHHCCCCCCCHHHHHHHhCccHHHHH--HHHHhhccC--
Confidence 589999999999999832 2233333 334444432 4445667777777766 665442110
Q ss_pred cccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEE
Q 028496 80 RKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIY 156 (208)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~ 156 (208)
..+.++ .+ +..+.+.+.|.........++||+.++| ++.|++++
T Consensus 67 -------~~~~~~-------------------~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ 113 (226)
T PRK13222 67 -------EPDEEL-------------------LE-------KLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLA 113 (226)
T ss_pred -------CccHHH-------------------HH-------HHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEE
Confidence 011100 11 2223333344443444678999999999 57799999
Q ss_pred EEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 157 IVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 157 IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
|+||+....++..++++ |+..+|+.+++++.. |+|+++..+++++
T Consensus 114 i~S~~~~~~~~~~l~~~-~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 114 VVTNKPTPFVAPLLEAL-GIADYFSVVIGGDSLPNKKPDPAPLLLACEKL 162 (226)
T ss_pred EEeCCCHHHHHHHHHHc-CCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence 99999999999999995 999999999998765 8999999999875
No 24
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.78 E-value=2.1e-19 Score=143.96 Aligned_cols=155 Identities=14% Similarity=0.017 Sum_probs=97.8
Q ss_pred ceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHH-H-HhhhcCcccchhH--------HHHHHHHHH
Q 028496 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVD-Q-MHILRPVVETGYE--------NLLLVRLLL 72 (208)
Q Consensus 3 ~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~-~~~~~~~~g~~~~--------~~~~~~~~~ 72 (208)
++|||||||||+||+ +.+..+++.+++++|.. . .+.++.++|.+.. ..+ ...+
T Consensus 1 ~~viFD~DGTLiDs~---------------~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~ 63 (197)
T TIGR01548 1 QALVLDMDGVMADVS---------------QSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLV--VDGL 63 (197)
T ss_pred CceEEecCceEEech---------------HHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHH--HHhh
Confidence 479999999999999 66666777778888743 3 5566777775432 111 1121
Q ss_pred hhcCCcccccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHh-h--hccCCCCCCCHHHHH-
Q 028496 73 EIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLT-T--WIGANRFYPGIPDAL- 148 (208)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~-~--~~~~~~~~pgv~e~L- 148 (208)
.... . . .... ..+.+++.+.|++.+.... .|.. . ......+.+++.++|
T Consensus 64 ~~~~-----------~-~-~~~~-------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ 116 (197)
T TIGR01548 64 NSAS-----------S-E-RVRD-------------APTLEAVTAQFQALYQGVG-YYRDLATLGLIEDETLLTPKGLLR 116 (197)
T ss_pred hccc-----------c-h-hccC-------------CccHHHHHHHHHHHHcCCc-ccccccchhhhccccccCHHHHHH
Confidence 1100 0 0 0000 0013333333333332110 0000 0 001224556668888
Q ss_pred --HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC---CCHHHHHHHHHHh
Q 028496 149 --KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG---LVLSMLLGEILLW 202 (208)
Q Consensus 149 --~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~---PkPe~l~~~l~~~ 202 (208)
++.|++++|+||+++..++.+|+.+ |+..+|+.+++++++ |+|+++..++++.
T Consensus 117 ~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~ 174 (197)
T TIGR01548 117 ELHRAPKGMAVVTGRPRKDAAKFLTTH-GLEILFPVQIWMEDCPPKPNPEPLILAAKAL 174 (197)
T ss_pred HHHHcCCcEEEECCCCHHHHHHHHHHc-CchhhCCEEEeecCCCCCcCHHHHHHHHHHh
Confidence 6789999999999999999999994 999999999999876 9999999999874
No 25
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.78 E-value=3.1e-19 Score=143.57 Aligned_cols=66 Identities=24% Similarity=0.332 Sum_probs=60.0
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
...+++||+.++| ++.|++++|+||++...++..++++ |+.++|+.++++++. |+|++++.+++++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 144 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPLFDHVIGSDEVPRPKPAPDIVREALRLL 144 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc-CChhheeeEEecCcCCCCCCChHHHHHHHHHc
Confidence 4679999999999 5789999999999999999999995 999999999999765 8999999999885
No 26
>PRK09449 dUMP phosphatase; Provisional
Probab=99.77 E-value=5.7e-19 Score=143.71 Aligned_cols=67 Identities=12% Similarity=0.023 Sum_probs=58.9
Q ss_pred ccCCCCCCCHHHHHH--hCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 135 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 135 ~~~~~~~pgv~e~L~--~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
.....++||+.++|+ +.|++++|+||++...++..|++ +|+.++|+.+++++++ |+|+++..+++++
T Consensus 91 ~~~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~ 163 (224)
T PRK09449 91 AEICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQM 163 (224)
T ss_pred hhcCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHc
Confidence 334689999999991 36799999999999999999999 5999999999999775 9999999999985
No 27
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.75 E-value=3.6e-18 Score=137.02 Aligned_cols=64 Identities=16% Similarity=0.054 Sum_probs=55.6
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
...++||+.++| ++.|++++|+||++.. ++..++++ |+..+|+.+++++++ |+|+++.+++++.
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~-~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~ 173 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEAL-GLLEYFDFVVTSYEVGAEKPDPKIFQEALERA 173 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHC-CcHHhcceEEeecccCCCCCCHHHHHHHHHHc
Confidence 357999999999 5779999999999875 57889994 999999999998765 8899999999875
No 28
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.73 E-value=1.1e-17 Score=135.63 Aligned_cols=65 Identities=18% Similarity=0.147 Sum_probs=58.2
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
...+++||+.++| ++. ++++|+||++...++..++.+ |+..+|+.++++++. |+|+++..++++.
T Consensus 94 ~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~-~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~ 165 (224)
T TIGR02254 94 EGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS-GLFPFFDDIFVSEDAGIQKPDKEIFNYALERM 165 (224)
T ss_pred ccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC-CcHhhcCEEEEcCccCCCCCCHHHHHHHHHHh
Confidence 3568999999999 456 999999999999999999994 999999999998765 9999999999876
No 29
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.72 E-value=2.7e-17 Score=131.48 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=58.9
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
...++||+.++| +++|++++|+||++...++..+++ .|+.++|+.+++++++ |+|+++..++++.
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~ 161 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEAL 161 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHh
Confidence 457999999999 577999999999999999999999 5999999999999876 8999999999874
No 30
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.71 E-value=5.4e-17 Score=132.84 Aligned_cols=67 Identities=12% Similarity=-0.053 Sum_probs=60.2
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
.....++||+.++| +++|++++|+||+++..++..+++ +|+.++|+.+++++++ |+|++++.++++.
T Consensus 89 ~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~ 162 (224)
T PRK14988 89 GPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHT 162 (224)
T ss_pred hccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHc
Confidence 34678999999999 678999999999999999999999 4999999999998765 8899999999874
No 31
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.70 E-value=4.1e-17 Score=130.42 Aligned_cols=66 Identities=14% Similarity=0.062 Sum_probs=51.9
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC----CCCeEEeCCCC-CCHHHHHHHHHHh
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI----PPDRIYGLGTG-LVLSMLLGEILLW 202 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~----~F~~iv~~d~~-PkPe~l~~~l~~~ 202 (208)
.....+|||+.++| ++. ++++++||++.......++. +++.. +|+.+++++.. |||++++.+++++
T Consensus 70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~ 143 (197)
T PHA02597 70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKY 143 (197)
T ss_pred HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHh
Confidence 34578999999999 344 67889999887766667777 47765 55778888777 9999999999875
No 32
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.70 E-value=9.1e-17 Score=127.13 Aligned_cols=65 Identities=18% Similarity=0.087 Sum_probs=56.7
Q ss_pred CCCCCCCHHHHHHhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC--------CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--------LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~--------PkPe~l~~~l~~~ 202 (208)
...++||+.++|+...++++|+||+++..+...++++ |+.++|+.|+++++. |+|++++.++++.
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~-gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 154 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRL-GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREA 154 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHc-CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHh
Confidence 4679999999996555799999999999999999995 999999999998653 7889999999874
No 33
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.69 E-value=8.2e-17 Score=132.77 Aligned_cols=61 Identities=10% Similarity=-0.060 Sum_probs=51.2
Q ss_pred cCCCCCCCHHHHH-H-hCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL-K-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L-~-~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
....++||+.++| . +.+++++|+||++.. +++ .|+.++|+.|++++++ |+|+++..++++.
T Consensus 110 ~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~ 176 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PEL-FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKL 176 (238)
T ss_pred hcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHH-CCcHHhhceeEecccCCcCCCcHHHHHHHHHHc
Confidence 4578999999999 2 345999999998865 477 5999999999999765 9999999999863
No 34
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.69 E-value=4.4e-17 Score=158.46 Aligned_cols=148 Identities=20% Similarity=0.242 Sum_probs=100.2
Q ss_pred CceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCccc
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIR 80 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (208)
.++|||||||||+||+ +.+..+++++++++|++. .+.++..+|.+...++ +.+.+..
T Consensus 75 ikaVIFDlDGTLiDS~---------------~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~--~~~~~~~----- 132 (1057)
T PLN02919 75 VSAVLFDMDGVLCNSE---------------EPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFL--GGVASVK----- 132 (1057)
T ss_pred CCEEEECCCCCeEeCh---------------HHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHH--HHHHHhc-----
Confidence 4799999999999999 333334444555566544 4455667787776665 5543311
Q ss_pred ccccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEE
Q 028496 81 KSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYI 157 (208)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~I 157 (208)
+++ +.+.++.. .+.++.+.+.|.. .....++||+.++| +++|++++|
T Consensus 133 ------~l~-------------------~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~pG~~elL~~Lk~~G~~l~I 182 (1057)
T PLN02919 133 ------GVK-------------------GFDPDAAK---KRFFEIYLEKYAK--PNSGIGFPGALELITQCKNKGLKVAV 182 (1057)
T ss_pred ------CCC-------------------CCCHHHHH---HHHHHHHHHHhhh--cccCccCccHHHHHHHHHhCCCeEEE
Confidence 110 00111111 1222223333321 12235899999999 688999999
Q ss_pred EcCCcHHHHHHHHHhhCCCC-CCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 158 VTTKQSRFADALLRELAGVT-IPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 158 vTn~~~~~~~~~L~~~~gl~-~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
+||+.+..++..|++ +|+. .+|+.+++++++ |+|+++++++++.
T Consensus 183 vSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l 231 (1057)
T PLN02919 183 ASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL 231 (1057)
T ss_pred EeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence 999999999999999 5996 789999999876 9999999999874
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.68 E-value=4.7e-17 Score=125.70 Aligned_cols=66 Identities=18% Similarity=0.149 Sum_probs=60.0
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
....++||+.++| ++.|++++|+||++...++..++++ |+..+|+.++++++. |+|+.+..+++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~-~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~ 146 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL-GLDDYFDEIISSDDVGSRKPDPDAYRRALEKL 146 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT-THGGGCSEEEEGGGSSSSTTSHHHHHHHHHHH
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccc-ccccccccccccchhhhhhhHHHHHHHHHHHc
Confidence 5679999999999 5689999999999999999999995 999999999998765 8889999999886
No 36
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.67 E-value=5e-16 Score=131.61 Aligned_cols=64 Identities=8% Similarity=0.021 Sum_probs=51.9
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCC--eEEeCCCC----CCHHHHHHHHHHh
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~--~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
..++||+.++| ++.|++++|+||++...+..+++.+ +...+|+ .+++++++ |+|+++..+++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~-~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~ 215 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL-LGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETL 215 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-ccccccCceEEEeccccCCCCCCHHHHHHHHHHh
Confidence 58999999999 5789999999999999999999984 5444554 23366654 8999999999885
No 37
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.66 E-value=5e-17 Score=127.35 Aligned_cols=61 Identities=18% Similarity=0.099 Sum_probs=55.0
Q ss_pred CCCCCCCHHHHHHhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
...++||+.++|+ +++|+||++...+...+++ .|+..+|+.+++++++ |+|++|+.++++.
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~ 152 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTV 152 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4679999999996 4899999999999999999 4999999999999875 9999999999874
No 38
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.66 E-value=7.3e-17 Score=130.23 Aligned_cols=66 Identities=9% Similarity=-0.042 Sum_probs=53.5
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHH--HHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRF--ADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~--~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
....++||+.++| +++|++++|+||++... ....+..+ ++..+|+.++++++. |+|+++..+++++
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~-~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~ 165 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG-DIMALFDAVVESCLEGLRKPDPRIYQLMLERL 165 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh-hhHhhCCEEEEeeecCCCCCCHHHHHHHHHHc
Confidence 3578999999999 57899999999987643 33445563 888999999988654 9999999999874
No 39
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.65 E-value=2.1e-16 Score=121.29 Aligned_cols=64 Identities=22% Similarity=0.187 Sum_probs=56.6
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC---CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG---LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~---PkPe~l~~~l~~~ 202 (208)
...++||+.++| ++.|++++|+||+++..+...++. . +..+|+.++++++. |+|+++.+++++.
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~ 131 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESL 131 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHc
Confidence 456789999999 578999999999999999999998 4 78899999998766 8999999999875
No 40
>PLN02811 hydrolase
Probab=99.56 E-value=3.7e-15 Score=121.35 Aligned_cols=66 Identities=14% Similarity=0.090 Sum_probs=54.7
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHH-HHHhhCCCCCCCCeEEeCC--CC----CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADA-LLRELAGVTIPPDRIYGLG--TG----LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~-~L~~~~gl~~~F~~iv~~d--~~----PkPe~l~~~l~~~ 202 (208)
....++||+.++| ++.|++++|+||+++..... .++. .++.++|+.+++++ ++ |+|++++.++++.
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~ 150 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRF 150 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHh
Confidence 3568999999999 67899999999999865544 4445 37889999999998 54 9999999999875
No 41
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.53 E-value=9.1e-14 Score=108.94 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=55.2
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
.+++||+.++| ++.|++++|+||++... ...+.++ |+..+|+.++++++. |+|+++..++++.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~-~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 153 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL-GLRDLFDVVIFSGDVGRGKPDPDIYLLALKKL 153 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc-CCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHc
Confidence 68999999999 57899999999999988 7777774 999999999988665 8899999998874
No 42
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.50 E-value=1.7e-14 Score=117.36 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=99.1
Q ss_pred ceeeeecCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHH-HhhhcCcccchhHHHHHHHHHHhhcCCcccc
Q 028496 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQ-MHILRPVVETGYENLLLVRLLLEIRMPSIRK 81 (208)
Q Consensus 3 ~~viFD~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 81 (208)
.+++||+||||+||+..|..+ ++..+.++|.+. .+.....+|.+..+.. +.+....
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~---------------~~~~~~~ygk~~~~~~~~~~mG~~~~eaa--~~~~~~~------ 67 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEA---------------WQELLDRYGKPYPWDVKVKSMGKRTSEAA--RLFVKKL------ 67 (222)
T ss_pred eeEEEecCCcEEecHHHHHHH---------------HHHHHHHcCCCChHHHHHHHcCCCHHHHH--HHHHhhc------
Confidence 479999999999999444432 333455566532 4444668888888777 7665321
Q ss_pred cccCCCCCHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEEE
Q 028496 82 SSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIV 158 (208)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~Iv 158 (208)
.++ .+.+++.....+..+.+ .....++||+..++ +..|++++++
T Consensus 68 -----~dp--------------------~s~ee~~~e~~~~~~~~--------~~~~~~~PGa~kLv~~L~~~gip~ala 114 (222)
T KOG2914|consen 68 -----PDP--------------------VSREEFNKEEEEILDRL--------FMNSILMPGAEKLVNHLKNNGIPVALA 114 (222)
T ss_pred -----CCC--------------------CCHHHHHHHHHHHHHHh--------ccccccCCcHHHHHHHHHhCCCCeeEE
Confidence 011 01333333333333322 35678999999999 5789999999
Q ss_pred cCCcHHHHHHHHHhhCC-CCCCCCeEEeCC--CC----CCHHHHHHHHHHh
Q 028496 159 TTKQSRFADALLRELAG-VTIPPDRIYGLG--TG----LVLSMLLGEILLW 202 (208)
Q Consensus 159 Tn~~~~~~~~~L~~~~g-l~~~F~~iv~~d--~~----PkPe~l~~~l~~~ 202 (208)
||+++......++++ + +...|+.++.++ ++ |+|++|+.+.++.
T Consensus 115 t~s~~~~~~~k~~~~-~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l 164 (222)
T KOG2914|consen 115 TSSTSASFELKISRH-EDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRL 164 (222)
T ss_pred ecCCcccHHHHHHHh-hHHHHhcCCCeecCCccccCCCCCchHHHHHHHhc
Confidence 999999999999996 6 888898877633 33 9999999998874
No 43
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.48 E-value=2.7e-13 Score=108.65 Aligned_cols=64 Identities=11% Similarity=0.075 Sum_probs=54.7
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
.++||+.++| ++.|++++|+||++.......+..+.++..+|+.+++++++ |+|++|+.++++.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~ 154 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAE 154 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHc
Confidence 5899999999 57899999999999887776665523788999999999776 9999999999874
No 44
>PLN02954 phosphoserine phosphatase
Probab=99.47 E-value=1.8e-13 Score=111.25 Aligned_cols=64 Identities=16% Similarity=0.208 Sum_probs=50.5
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC--CCCCe---------EEeCCC------C-CCHHHHH
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT--IPPDR---------IYGLGT------G-LVLSMLL 196 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~--~~F~~---------iv~~d~------~-PkPe~l~ 196 (208)
..++||+.++| ++.|++++|+||+....++.+++.+ |+. .+|.. +.|.+. . |||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~-gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL-GIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh-CCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 56899999999 6789999999999999999999995 997 35632 222211 1 7999999
Q ss_pred HHHHHh
Q 028496 197 GEILLW 202 (208)
Q Consensus 197 ~~l~~~ 202 (208)
.+++++
T Consensus 162 ~~~~~~ 167 (224)
T PLN02954 162 HIKKKH 167 (224)
T ss_pred HHHHHc
Confidence 988764
No 45
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.45 E-value=9e-13 Score=107.04 Aligned_cols=64 Identities=17% Similarity=0.060 Sum_probs=56.7
Q ss_pred CCCCCCCHHHHHH---hCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L~---~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
..+++|++.++|+ .. ++++|+||+....+...++. .||.++||.|++++++ |+|++|..++++.
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~ 167 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKL 167 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHc
Confidence 5789999999992 33 88999999999999999999 5999999999999776 8899999999874
No 46
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.43 E-value=2.5e-13 Score=108.19 Aligned_cols=49 Identities=10% Similarity=-0.043 Sum_probs=42.6
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
..+++||+.++| ++.|++++|+||+....++..++++ |+..+|...+..
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-g~~~~~~~~~~~ 129 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL-NPDYVYSNELVF 129 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh-CCCeEEEEEEEE
Confidence 468999999999 5789999999999999999999995 998888665544
No 47
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.43 E-value=5.4e-13 Score=108.10 Aligned_cols=65 Identities=12% Similarity=0.008 Sum_probs=52.5
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeE-------EeC----CCC---CCHHHHHHHH
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRI-------YGL----GTG---LVLSMLLGEI 199 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~i-------v~~----d~~---PkPe~l~~~l 199 (208)
..+++||+.++| ++.|++++|+||+....++..++.+ |+..+|... +++ ... |||+++..++
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 161 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL-GLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILL 161 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHH
Confidence 457999999999 5779999999999999999999995 999888532 111 111 6999999998
Q ss_pred HHh
Q 028496 200 LLW 202 (208)
Q Consensus 200 ~~~ 202 (208)
+++
T Consensus 162 ~~~ 164 (219)
T TIGR00338 162 RKE 164 (219)
T ss_pred HHc
Confidence 875
No 48
>PRK11590 hypothetical protein; Provisional
Probab=99.40 E-value=7.7e-13 Score=107.24 Aligned_cols=48 Identities=6% Similarity=0.138 Sum_probs=38.6
Q ss_pred CCCCCCHHHHH-H---hCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCC
Q 028496 138 NRFYPGIPDAL-K---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 187 (208)
Q Consensus 138 ~~~~pgv~e~L-~---~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d 187 (208)
..+|||+.++| + +.|++++||||+++..++.+++.+ |+.. .+.++|.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l-~~~~-~~~~i~t~ 145 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT-PWLP-RVNLIASQ 145 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-cccc-cCceEEEE
Confidence 57799999999 2 468999999999999999999995 8633 44555543
No 49
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.39 E-value=6.7e-13 Score=109.46 Aligned_cols=60 Identities=8% Similarity=0.032 Sum_probs=51.2
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCC----cHHHHHHHHHhhCCCCCCCCeEEeCCCC--CCHHHH
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTK----QSRFADALLRELAGVTIPPDRIYGLGTG--LVLSML 195 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~----~~~~~~~~L~~~~gl~~~F~~iv~~d~~--PkPe~l 195 (208)
.....|++++.++| +++|++++||||+ .+..++.+++++ |+..+|+.++++++. |||++.
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l-Gi~~~f~~i~~~d~~~~~Kp~~~ 178 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF-HIPAMNPVIFAGDKPGQYQYTKT 178 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh-CCchheeEEECCCCCCCCCCCHH
Confidence 34567888899999 5889999999998 777899999995 999999999999876 677765
No 50
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.35 E-value=9.5e-12 Score=97.94 Aligned_cols=63 Identities=16% Similarity=0.144 Sum_probs=54.8
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCC-----------------------C-C
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-----------------------G-L 190 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~-----------------------~-P 190 (208)
.+++||+.++| ++.|++++|+||+....++..++++ |+..+|+.++|++. . +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI-GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc-CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 68999999999 5789999999999999999999995 99999999997532 1 6
Q ss_pred CHHHHHHHHHH
Q 028496 191 VLSMLLGEILL 201 (208)
Q Consensus 191 kPe~l~~~l~~ 201 (208)
||+++.+++.+
T Consensus 150 K~~~~~~~~~~ 160 (188)
T TIGR01489 150 KGKVIHKLSEP 160 (188)
T ss_pred HHHHHHHHHhh
Confidence 88998888776
No 51
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.30 E-value=7.1e-12 Score=101.99 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=35.6
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
....++||+.++| ++.|++++|+||+....++.+|++ . +.
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~ 113 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IP 113 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CC
Confidence 3578999999999 688999999999999999999999 5 54
No 52
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.24 E-value=9e-11 Score=94.02 Aligned_cols=65 Identities=15% Similarity=0.052 Sum_probs=48.5
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC--------CCCCCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL--------GTGLVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~--------d~~PkPe~l~~~l~~~ 202 (208)
...+++||+.++| ++. ++++|+||+....++..++++ |+..+|...+.. ...++|++...+++++
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~-gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~ 140 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL-GWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKAL 140 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc-CCchhhcceEEECCCCeEECccccccchHHHHHHHH
Confidence 3568999999999 456 899999999999999999995 999888653322 1124555555555544
No 53
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.22 E-value=1.8e-11 Score=91.82 Aligned_cols=63 Identities=16% Similarity=-0.090 Sum_probs=55.8
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCC-cHHHHHHHHHhhCC-------CCCCCCeEEeCCCCCCHHHHHHHHHHh
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTK-QSRFADALLRELAG-------VTIPPDRIYGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~-~~~~~~~~L~~~~g-------l~~~F~~iv~~d~~PkPe~l~~~l~~~ 202 (208)
++|||+.++| +++|++++|+||+ ....+...++. .+ +.++|+.+++++..|||++++.++++.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~l 102 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKL 102 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHh
Confidence 5789999998 6789999999999 88899999999 48 899999999987669999999999874
No 54
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.15 E-value=4.8e-11 Score=94.09 Aligned_cols=54 Identities=15% Similarity=0.051 Sum_probs=48.2
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCC-cHHHHHHHHHhhCCCC---------CCCCeEEeCCCC
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTK-QSRFADALLRELAGVT---------IPPDRIYGLGTG 189 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~-~~~~~~~~L~~~~gl~---------~~F~~iv~~d~~ 189 (208)
.....+|||+.++| +++|++++|+||+ +...++..|+.+ |+. ++|+.+++++..
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~-~l~~~~~~~~~~~~Fd~iv~~~~~ 107 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF-EITYAGKTVPMHSLFDDRIEIYKP 107 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC-CcCCCCCcccHHHhceeeeeccCC
Confidence 34578999999999 6889999999998 889999999994 999 999999999776
No 55
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.98 E-value=3e-09 Score=86.27 Aligned_cols=58 Identities=9% Similarity=-0.026 Sum_probs=44.4
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCC---CeEEeCCCC----CCHHHH
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP---DRIYGLGTG----LVLSML 195 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F---~~iv~~d~~----PkPe~l 195 (208)
...++||+.++| ++.|++++|+||+....++.+++.+ +...+| +.+++++.. |+|+++
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~~p~~~~~ 135 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNEADFSNEYIHIDWPHPCDG 135 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh-CCcccEEeceeEeeCCeeEEeCCCCCcc
Confidence 468999999999 5789999999999999999999995 655554 334444433 766654
No 56
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.97 E-value=8.6e-10 Score=82.54 Aligned_cols=61 Identities=34% Similarity=0.447 Sum_probs=49.3
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCc--------HHHHHHHHHhhCCCCCCCCeEEeCCCC--CCHHHHHHHHHHh
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQ--------SRFADALLRELAGVTIPPDRIYGLGTG--LVLSMLLGEILLW 202 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~--------~~~~~~~L~~~~gl~~~F~~iv~~d~~--PkPe~l~~~l~~~ 202 (208)
.++||+.++| ++.|++++|+||++ ...++..++++ |+. |+.++.+... |+|+++..++++.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~-~l~--~~~~~~~~~~~KP~~~~~~~~~~~~ 98 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL-GVP--IDVLYACPHCRKPKPGMFLEALKRF 98 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC-CCC--EEEEEECCCCCCCChHHHHHHHHHc
Confidence 5789999998 67899999999999 88899999995 985 3443333323 9999999999886
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=98.95 E-value=5.5e-09 Score=85.40 Aligned_cols=74 Identities=12% Similarity=0.049 Sum_probs=57.7
Q ss_pred HHhhHhhhccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhC---CCCCCCCeEEeCCCC--CCHHHHHHH
Q 028496 127 MDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELA---GVTIPPDRIYGLGTG--LVLSMLLGE 198 (208)
Q Consensus 127 ~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~---gl~~~F~~iv~~d~~--PkPe~l~~~ 198 (208)
.+.|.. .....++|||+.++| +++|++++|+||++...++..+++ . ++.++|+.++....+ |+|++|..+
T Consensus 84 ~~~Y~~-~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i 161 (220)
T TIGR01691 84 RQGYES-GELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVKI 161 (220)
T ss_pred HHHHhc-CCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHHH
Confidence 334433 345678999999999 578999999999999988888877 4 577778776654333 999999999
Q ss_pred HHHh
Q 028496 199 ILLW 202 (208)
Q Consensus 199 l~~~ 202 (208)
+++.
T Consensus 162 ~~~l 165 (220)
T TIGR01691 162 AGQL 165 (220)
T ss_pred HHHh
Confidence 9874
No 58
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.95 E-value=8.2e-09 Score=83.78 Aligned_cols=47 Identities=11% Similarity=0.227 Sum_probs=36.7
Q ss_pred CCCCCCHHHHH----HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 138 NRFYPGIPDAL----KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 138 ~~~~pgv~e~L----~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
..+|||+.++| +++|.+++||||+++..++.+.+. .++..- +.++|.
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~i~t 143 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNLIAS 143 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcEEEE
Confidence 57899999999 246999999999999999999988 366442 344444
No 59
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.94 E-value=4.5e-09 Score=82.30 Aligned_cols=62 Identities=23% Similarity=0.217 Sum_probs=49.4
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHH------------HHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHH
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSR------------FADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEI 199 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~------------~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l 199 (208)
.+|||+.++| ++.|++++|+||++.. .++.+|+++ |+. ++.+++++.. |+|+++..++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~-gl~--~~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL-KVP--IQVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc-CCC--EEEEEecCCCCCCCCccHHHHHHH
Confidence 3789999999 5789999999998873 577889995 984 3566665443 8899999999
Q ss_pred HHhh
Q 028496 200 LLWL 203 (208)
Q Consensus 200 ~~~~ 203 (208)
+++.
T Consensus 119 ~~~~ 122 (166)
T TIGR01664 119 SQYN 122 (166)
T ss_pred HHcC
Confidence 8863
No 60
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.94 E-value=6e-09 Score=89.74 Aligned_cols=65 Identities=14% Similarity=0.069 Sum_probs=50.8
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCC-------eEE----eCCCC---CCHHHHHHHH
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD-------RIY----GLGTG---LVLSMLLGEI 199 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~-------~iv----~~d~~---PkPe~l~~~l 199 (208)
..+++||+.++| ++.|++++|+||+....++.+++++ |+...+. ..+ .++.+ |||+.+.+++
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L-gld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la 257 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL-RLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLA 257 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc-CCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHH
Confidence 468999999998 6889999999999999999999995 9865442 112 12222 9999999998
Q ss_pred HHh
Q 028496 200 LLW 202 (208)
Q Consensus 200 ~~~ 202 (208)
+++
T Consensus 258 ~~l 260 (322)
T PRK11133 258 QEY 260 (322)
T ss_pred HHc
Confidence 874
No 61
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.93 E-value=1.4e-08 Score=79.18 Aligned_cols=65 Identities=14% Similarity=0.083 Sum_probs=50.1
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCC-C-----------C----CCHHHHH
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-T-----------G----LVLSMLL 196 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d-~-----------~----PkPe~l~ 196 (208)
...+++||+.+++ ++.|++++|+|++....++..++++ |+..+|...+..+ + . .|++.+.
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~-g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL-GIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 4567899999999 5789999999999999999999995 9988775433321 1 1 5677777
Q ss_pred HHHHH
Q 028496 197 GEILL 201 (208)
Q Consensus 197 ~~l~~ 201 (208)
.++++
T Consensus 149 ~~~~~ 153 (177)
T TIGR01488 149 ELLEE 153 (177)
T ss_pred HHHHH
Confidence 76665
No 62
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.92 E-value=1.5e-09 Score=83.14 Aligned_cols=63 Identities=22% Similarity=0.213 Sum_probs=47.0
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcH---------------HHHHHHHHhhCCCCCC--CCeEEe-CCCC----CCHH
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIP--PDRIYG-LGTG----LVLS 193 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~--F~~iv~-~d~~----PkPe 193 (208)
.++||+.++| +++|++++|+||+++ ..+...++++ |+... |..+.+ ++.. |+|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL-GVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC-CCceeEEEECCCCCCCCCCCCCCCHH
Confidence 5799999998 689999999999884 5677889994 98621 111221 3322 9999
Q ss_pred HHHHHHHHh
Q 028496 194 MLLGEILLW 202 (208)
Q Consensus 194 ~l~~~l~~~ 202 (208)
+++.++++.
T Consensus 106 ~~~~~~~~~ 114 (147)
T TIGR01656 106 LILEALKRL 114 (147)
T ss_pred HHHHHHHHc
Confidence 999999875
No 63
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.91 E-value=3.9e-09 Score=88.94 Aligned_cols=40 Identities=13% Similarity=0.004 Sum_probs=37.4
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG 189 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~ 189 (208)
+++|++++|+||+++..+...|++ +|+..+|+.|+++++.
T Consensus 159 kekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 159 KKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGGHK 198 (301)
T ss_pred HHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECCcc
Confidence 678999999999999999999999 5999999999999877
No 64
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.91 E-value=4.6e-09 Score=82.99 Aligned_cols=62 Identities=26% Similarity=0.151 Sum_probs=47.9
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcH---------------HHHHHHHHhhCCCCCCCCeEEeC-----CCC----C
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL-----GTG----L 190 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~F~~iv~~-----d~~----P 190 (208)
..++||+.++| ++.|++++|+||++. ..+...++++ |+ +|+.++++ +.. |
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR-GG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CC--ccceEEECCCCCCCCCcCCCC
Confidence 36899999999 678999999999973 4455677884 87 48877653 222 9
Q ss_pred CHHHHHHHHHHh
Q 028496 191 VLSMLLGEILLW 202 (208)
Q Consensus 191 kPe~l~~~l~~~ 202 (208)
+|+++..+++++
T Consensus 105 ~p~~~~~~~~~l 116 (181)
T PRK08942 105 KPGMLLSIAERL 116 (181)
T ss_pred CHHHHHHHHHHc
Confidence 999999999875
No 65
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.88 E-value=1.8e-08 Score=81.42 Aligned_cols=43 Identities=16% Similarity=0.229 Sum_probs=37.8
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCC
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD 181 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~ 181 (208)
..+++||+.++| ++. .+++|+||+....+..+++.+ |+..+|.
T Consensus 66 ~i~l~pga~ell~~lk~~-~~~~IVS~~~~~~~~~il~~l-gi~~~~a 111 (203)
T TIGR02137 66 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL-GFPTLLC 111 (203)
T ss_pred hCCCCccHHHHHHHHHhC-CeEEEEeCChHHHHHHHHHHc-CCchhhc
Confidence 468999999999 344 599999999999999999995 9998885
No 66
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.88 E-value=5.9e-08 Score=77.45 Aligned_cols=44 Identities=23% Similarity=0.347 Sum_probs=39.2
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCe
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR 182 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~ 182 (208)
..++||+.++| +++|++++|+||++...++..++++ |+..+|..
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l-g~~~~~~~ 132 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL-GIDNAIGT 132 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCcceEec
Confidence 47899999999 5789999999999999999999995 99988754
No 67
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.83 E-value=2.1e-08 Score=78.98 Aligned_cols=62 Identities=29% Similarity=0.238 Sum_probs=48.1
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcH---------------HHHHHHHHhhCCCCCCCCeEEeC-----------CC
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL-----------GT 188 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~F~~iv~~-----------d~ 188 (208)
..++||+.++| +++|++++|+||++. ..+...+.++ ++. |+.++.+ +.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER-DVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CCC--ccEEEECCCCCcccccccCC
Confidence 36899999999 688999999999984 4556678884 775 7776542 12
Q ss_pred C----CCHHHHHHHHHHh
Q 028496 189 G----LVLSMLLGEILLW 202 (208)
Q Consensus 189 ~----PkPe~l~~~l~~~ 202 (208)
. |+|++++.+++++
T Consensus 102 ~~~~KP~p~~~~~a~~~~ 119 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKEL 119 (176)
T ss_pred CCCCCCCHHHHHHHHHHc
Confidence 2 9999999999874
No 68
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.83 E-value=3.4e-09 Score=87.01 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=53.2
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~~~ 202 (208)
.....+|+.++| +..|..++|+||-... .+..+.. +|+..|||+++.|... |.|.+|+.++++.
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l 181 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERL 181 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHh
Confidence 457788888888 6789999999998865 5588999 4999999998877444 9999999999873
No 69
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.77 E-value=3e-08 Score=81.88 Aligned_cols=54 Identities=9% Similarity=0.027 Sum_probs=45.8
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCC----cHHHHHHHHHhhCCC--CCCCCeEEeCCCC
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTK----QSRFADALLRELAGV--TIPPDRIYGLGTG 189 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~----~~~~~~~~L~~~~gl--~~~F~~iv~~d~~ 189 (208)
.....|+||+.++| +++|++++++||+ ....+..+++.+ |+ .++|+.+++++..
T Consensus 110 ~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~-gip~~~~f~vil~gd~~ 172 (237)
T PRK11009 110 DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF-HIPADNMNPVIFAGDKP 172 (237)
T ss_pred cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc-CCCcccceeEEEcCCCC
Confidence 45678999999999 5889999999995 466888888885 99 8999999998765
No 70
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.73 E-value=3.4e-08 Score=83.32 Aligned_cols=40 Identities=15% Similarity=-0.036 Sum_probs=37.1
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG 189 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~ 189 (208)
+++|++++|+||+++..+...|+.+ |+..+|+.|+|++..
T Consensus 161 kekGikLaIvTNg~Re~v~~~Le~l-gL~~yFDvII~~g~i 200 (303)
T PHA03398 161 KERGCVLVLWSYGNREHVVHSLKET-KLEGYFDIIICGGRK 200 (303)
T ss_pred HHCCCEEEEEcCCChHHHHHHHHHc-CCCccccEEEECCCc
Confidence 6889999999999999999999994 999999999999775
No 71
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.70 E-value=2.5e-08 Score=85.83 Aligned_cols=62 Identities=6% Similarity=-0.149 Sum_probs=54.1
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHh----hCCCCCCCCeEEeCCCCCCHHHHHHHHHHh
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE----LAGVTIPPDRIYGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~----~~gl~~~F~~iv~~d~~PkPe~l~~~l~~~ 202 (208)
.+|||+.++| +++|++++||||+++..+...+++ + ++.++|+.+.++-. |||+.++.++++.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~-~~~~~f~~~~~~~~-pk~~~i~~~~~~l 99 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI-LQAEDFDARSINWG-PKSESLRKIAKKL 99 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc-CcHHHeeEEEEecC-chHHHHHHHHHHh
Confidence 4578888888 678999999999999999999999 7 88899999877632 9999999999873
No 72
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.68 E-value=1.3e-07 Score=77.81 Aligned_cols=50 Identities=20% Similarity=0.282 Sum_probs=44.6
Q ss_pred cCCCCCCCHHHHH----H-hCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 136 GANRFYPGIPDAL----K-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 136 ~~~~~~pgv~e~L----~-~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
...++-||+.+++ + ..|+.+.|+|.+..-.++.+|+++ |+...|+.|++.
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~-gl~~~f~~I~TN 122 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH-GLRDCFSEIFTN 122 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC-CCccccceEEeC
Confidence 4678999999999 1 358999999999999999999995 999999999886
No 73
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.67 E-value=1.3e-07 Score=76.87 Aligned_cols=48 Identities=17% Similarity=0.319 Sum_probs=42.2
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
.+++||+.+++ ++.|.+++|+|++....++.+.+.+ |++..+...+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l-g~d~~~an~l~~ 126 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL-GIDYVVANELEI 126 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh-CCchheeeEEEE
Confidence 78999999999 6899999999999999999999995 999888654433
No 74
>PRK08238 hypothetical protein; Validated
Probab=98.61 E-value=4.7e-07 Score=81.93 Aligned_cols=48 Identities=21% Similarity=0.349 Sum_probs=43.2
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG 189 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~ 189 (208)
.+++||+.++| +++|++++|+||+++..++.+++++ |+ |+.++|+++.
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l-Gl---Fd~Vigsd~~ 121 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL-GL---FDGVFASDGT 121 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CC---CCEEEeCCCc
Confidence 46789999999 5889999999999999999999995 87 9999999865
No 75
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.59 E-value=2.3e-07 Score=67.94 Aligned_cols=64 Identities=28% Similarity=0.320 Sum_probs=52.6
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC--------------------CCHHH
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--------------------LVLSM 194 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~--------------------PkPe~ 194 (208)
..++||+.++| ++.|++++|+||+....++..++.+ |+..+|+.+++++.. |+|+.
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL-GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDK 101 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc-CCchhhhheeccchhhhhcccccccccccccccCCCCHHH
Confidence 46788888888 5678999999999999999999995 998889888876533 46778
Q ss_pred HHHHHHHh
Q 028496 195 LLGEILLW 202 (208)
Q Consensus 195 l~~~l~~~ 202 (208)
+..+++++
T Consensus 102 ~~~~~~~~ 109 (139)
T cd01427 102 LLAALKLL 109 (139)
T ss_pred HHHHHHHc
Confidence 88777774
No 76
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.57 E-value=4.3e-07 Score=73.12 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=51.0
Q ss_pred CCCCCCCHHHHH-HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC----------CCHHHHHHHHHH
Q 028496 137 ANRFYPGIPDAL-KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG----------LVLSMLLGEILL 201 (208)
Q Consensus 137 ~~~~~pgv~e~L-~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~----------PkPe~l~~~l~~ 201 (208)
..+|=+-.+++| +-...+..+.||+.+..+.++|+++ ||.++|+.|++.+.. |.|+.+..+++.
T Consensus 98 ~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~L-GieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~ 172 (244)
T KOG3109|consen 98 DLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKL-GIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKV 172 (244)
T ss_pred hcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHh-ChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHH
Confidence 356666678888 3222238899999999999999996 999999999887542 889999988875
No 77
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.54 E-value=3.6e-07 Score=83.35 Aligned_cols=60 Identities=23% Similarity=0.313 Sum_probs=51.4
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcH------------HHHHHHHHhhCCCCCCCCeEEeCCCC----CCHHHHHHHHH
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQS------------RFADALLRELAGVTIPPDRIYGLGTG----LVLSMLLGEIL 200 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~------------~~~~~~L~~~~gl~~~F~~iv~~d~~----PkPe~l~~~l~ 200 (208)
+||||.+.| ++.|++++|+||++. ..+..+++.+ |+. |+.++|.+.. |+|.++..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l-gip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL-GVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc-CCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 589999999 588999999999887 4588899995 984 8988888654 99999999998
Q ss_pred Hh
Q 028496 201 LW 202 (208)
Q Consensus 201 ~~ 202 (208)
++
T Consensus 275 ~~ 276 (526)
T TIGR01663 275 EA 276 (526)
T ss_pred hc
Confidence 86
No 78
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.50 E-value=2.3e-07 Score=74.05 Aligned_cols=61 Identities=26% Similarity=0.277 Sum_probs=50.4
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCC--CCCHHHHHHHHHHh
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--GLVLSMLLGEILLW 202 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~--~PkPe~l~~~l~~~ 202 (208)
.+++||+.++| ++.|++++|+||.....+....+.+ || ++.++.++. .|.|.++.++++.+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l-gi---~~~~v~a~~~~kP~~k~~~~~i~~l 191 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL-GI---FDSIVFARVIGKPEPKIFLRIIKEL 191 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT-TS---CSEEEEESHETTTHHHHHHHHHHHH
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccc-cc---ccccccccccccccchhHHHHHHHH
Confidence 47899999999 6889999999999999999999995 98 454444444 38888889999884
No 79
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.49 E-value=1.4e-06 Score=73.22 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=52.7
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcH---HHHHHHHHhhCCCCCC-CCeEEeCCCC-CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQS---RFADALLRELAGVTIP-PDRIYGLGTG-LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~---~~~~~~L~~~~gl~~~-F~~iv~~d~~-PkPe~l~~~l~~~ 202 (208)
....++||+.++| ++.|++++++||++. ..+...|+++ |+... ++.++..++. +||+....+.+.|
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~-Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y 188 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF-GFPQADEEHLLLKKDKSSKESRRQKVQKDY 188 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc-CcCCCCcceEEeCCCCCCcHHHHHHHHhcC
Confidence 4568999999999 588999999999874 4455888994 99764 4778877666 9999888887754
No 80
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.44 E-value=7.9e-07 Score=77.46 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=49.4
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCC---------------cHHHHHHHHHhhCCCCCCCCeE-Ee----CCCC----
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRI-YG----LGTG---- 189 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~---------------~~~~~~~~L~~~~gl~~~F~~i-v~----~d~~---- 189 (208)
...+|||+.++| ++.|++++|+||+ +...+..+++.+ |+ +|+.+ ++ +++.
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~-gl--~fd~i~i~~~~~sd~~~~rK 104 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ-GI--KFDEVLICPHFPEDNCSCRK 104 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc-CC--ceeeEEEeCCcCcccCCCCC
Confidence 468899999999 6789999999996 456788889994 88 37765 44 2332
Q ss_pred CCHHHHHHHHHHh
Q 028496 190 LVLSMLLGEILLW 202 (208)
Q Consensus 190 PkPe~l~~~l~~~ 202 (208)
|+|+++..++++.
T Consensus 105 P~p~~l~~a~~~l 117 (354)
T PRK05446 105 PKTGLVEEYLAEG 117 (354)
T ss_pred CCHHHHHHHHHHc
Confidence 9999999998764
No 81
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.38 E-value=8.7e-07 Score=69.04 Aligned_cols=63 Identities=21% Similarity=0.187 Sum_probs=51.7
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCC---------------cHHHHHHHHHhhCCCCCCCCeE-Ee----CCCC----
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRI-YG----LGTG---- 189 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~---------------~~~~~~~~L~~~~gl~~~F~~i-v~----~d~~---- 189 (208)
...+|||+.++| +++|++++|+||+ ....+...++.+ |+. |+.+ +| +++.
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ-GII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC-CCc--eeEEEECCCCCCCCCCCCC
Confidence 468999999999 6789999999997 356788999995 996 7755 55 3443
Q ss_pred CCHHHHHHHHHHh
Q 028496 190 LVLSMLLGEILLW 202 (208)
Q Consensus 190 PkPe~l~~~l~~~ 202 (208)
|+|+++..+++++
T Consensus 104 P~~~~~~~~~~~~ 116 (161)
T TIGR01261 104 PKIKLLEPYLKKN 116 (161)
T ss_pred CCHHHHHHHHHHc
Confidence 9999999999885
No 82
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.24 E-value=1.7e-06 Score=67.91 Aligned_cols=63 Identities=17% Similarity=0.185 Sum_probs=40.1
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEc-CCcHHHHHHHHHhhCCCC----------CCCCeEEeCCCCCCHHHHHHHHH
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVT-TKQSRFADALLRELAGVT----------IPPDRIYGLGTGLVLSMLLGEIL 200 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvT-n~~~~~~~~~L~~~~gl~----------~~F~~iv~~d~~PkPe~l~~~l~ 200 (208)
..+.+||++.++| +..|+++++|| +...+.++.+|+.+ ++. ++|+..--... .|-.-+.++.+
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g-sK~~Hf~~i~~ 118 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG-SKTTHFRRIHR 118 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT-T-C----------CCECEEEESSS--HHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc-CCCccccccccchhhcchhheecC-chHHHHHHHHH
Confidence 3568999999999 67999999999 45567999999995 999 88877443322 55555555554
No 83
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.23 E-value=1.3e-06 Score=67.02 Aligned_cols=65 Identities=15% Similarity=0.054 Sum_probs=53.7
Q ss_pred cCCCCCCCHHHHH--HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC-CCCeEEeCCCC--CCHHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL--KFASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTG--LVLSMLLGEILLW 202 (208)
Q Consensus 136 ~~~~~~pgv~e~L--~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~-~F~~iv~~d~~--PkPe~l~~~l~~~ 202 (208)
..+.++||+.++| -+.+++++|+||+++..++.+++++ ++.. +|+.|++++++ .||. +++.+++.
T Consensus 42 ~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l-~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l 111 (148)
T smart00577 42 VYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLL-DPKKYFGYRRLFRDECVFVKGK-YVKDLSLL 111 (148)
T ss_pred EEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHh-CcCCCEeeeEEECccccccCCe-EeecHHHc
Confidence 3568899999999 2467999999999999999999995 9965 45999999888 7887 66666553
No 84
>PRK06769 hypothetical protein; Validated
Probab=98.18 E-value=3e-06 Score=66.59 Aligned_cols=64 Identities=16% Similarity=-0.051 Sum_probs=47.7
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHH--------HHHHHHHhhCCCCCCCCeEE-eCCCC----CCHHHHHHHHHH
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSR--------FADALLRELAGVTIPPDRIY-GLGTG----LVLSMLLGEILL 201 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~--------~~~~~L~~~~gl~~~F~~iv-~~d~~----PkPe~l~~~l~~ 201 (208)
..+|||+.++| ++.|++++|+||++.. .....++. +|+..+|..+. +++.+ |+|+++++++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 46899999999 6789999999998752 23445778 48766654433 34432 999999999998
Q ss_pred h
Q 028496 202 W 202 (208)
Q Consensus 202 ~ 202 (208)
+
T Consensus 106 l 106 (173)
T PRK06769 106 H 106 (173)
T ss_pred c
Confidence 5
No 85
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.92 E-value=1.6e-05 Score=67.41 Aligned_cols=65 Identities=14% Similarity=-0.010 Sum_probs=57.0
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC-CCCeEEeCC-------C---C-CCHHHHHHHHHH
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLG-------T---G-LVLSMLLGEILL 201 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~-~F~~iv~~d-------~---~-PkPe~l~~~l~~ 201 (208)
...++||+.++| ++.|++++|+||++....+..++.+ |+.. +|+.+++.+ + . |+|++++.++++
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l-~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL-RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH-HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 347899999999 5789999999999999999999996 9997 999999987 2 2 999999999886
Q ss_pred h
Q 028496 202 W 202 (208)
Q Consensus 202 ~ 202 (208)
.
T Consensus 264 ~ 264 (300)
T PHA02530 264 K 264 (300)
T ss_pred H
Confidence 3
No 86
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.92 E-value=0.0004 Score=58.65 Aligned_cols=47 Identities=17% Similarity=0.289 Sum_probs=42.2
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeE
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRI 183 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~i 183 (208)
....+.||+.+++ ++.|++++|+|++....++..|+.+ |+...+..|
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l-gl~~~~~~I 167 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA-GVYHPNVKV 167 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc-CCCCcCceE
Confidence 3688999999999 6889999999999999999999994 998777777
No 87
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.91 E-value=3.2e-05 Score=62.55 Aligned_cols=50 Identities=18% Similarity=0.239 Sum_probs=43.3
Q ss_pred CCCCCCCHHHHH---HhCC-CcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCC
Q 028496 137 ANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 187 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g-~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d 187 (208)
..+.-||+.+++ ++.| +.+.|+|-+..-.++..|+++ |+.+.|..|++.-
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~-~~~d~F~~IfTNP 135 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA-GIHDLFSEIFTNP 135 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc-cHHHHHHHHhcCC
Confidence 578899999999 3445 589999999999999999995 9999999888763
No 88
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.89 E-value=3.1e-06 Score=70.66 Aligned_cols=62 Identities=11% Similarity=-0.040 Sum_probs=48.6
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCC------C-CCHHHHHHHHHHh
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT------G-LVLSMLLGEILLW 202 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~------~-PkPe~l~~~l~~~ 202 (208)
.|+++.+++ ++.+++++|+||+++......+.. .|+..+|+.+.++.. . |+|+++..+++++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~ 192 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRAT 192 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHh
Confidence 467777766 467889999999998877777778 499899987765432 1 8999999999875
No 89
>PLN02645 phosphoglycolate phosphatase
Probab=97.88 E-value=3.3e-05 Score=66.24 Aligned_cols=48 Identities=17% Similarity=0.430 Sum_probs=38.1
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCc---HHHHHHHHHhhCCCCCCCCeEEeCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLG 187 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~---~~~~~~~L~~~~gl~~~F~~iv~~d 187 (208)
.++||+.++| ++.|++++++||++ .......|+.+ |+...++.|+++.
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l-Gi~~~~~~I~ts~ 97 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL-GLNVTEEEIFSSS 97 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC-CCCCChhhEeehH
Confidence 5789998888 57899999999988 44555567884 9987788888874
No 90
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.80 E-value=7.5e-05 Score=58.63 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=31.4
Q ss_pred CCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 142 pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
|++.++| ++.|++++|+|+++...++.+++.+ |+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~-~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL-GIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT-TSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCc
Confidence 5555999 5789999999999999999999995 9875
No 91
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.78 E-value=5.1e-05 Score=63.68 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=27.0
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPP 180 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F 180 (208)
++.|++++|+||++...+...++.+ |+..+|
T Consensus 34 ~~~Gi~~~iaTgR~~~~~~~~~~~l-~l~~~~ 64 (273)
T PRK00192 34 KEKGIPVIPCTSKTAAEVEVLRKEL-GLEDPF 64 (273)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHc-CCCCCE
Confidence 4679999999999999999999995 987665
No 92
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.64 E-value=0.00049 Score=54.81 Aligned_cols=65 Identities=14% Similarity=0.223 Sum_probs=49.8
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC--C------CC--e-EEeCCCC-------CCHH
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI--P------PD--R-IYGLGTG-------LVLS 193 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~--~------F~--~-iv~~d~~-------PkPe 193 (208)
.....+-||++++. ++.|..++++|++-+..+...-+.+ ||.. . |+ . ..|.+.. .|++
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L-gi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~ 162 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL-GIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAE 162 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh-CCcHhhhhhheeeeccCCcccccccCCccccCCccHH
Confidence 34678899999998 6899999999999999999999995 9975 2 21 1 2222221 7899
Q ss_pred HHHHHHH
Q 028496 194 MLLGEIL 200 (208)
Q Consensus 194 ~l~~~l~ 200 (208)
.+..+.+
T Consensus 163 ~i~~lrk 169 (227)
T KOG1615|consen 163 VIALLRK 169 (227)
T ss_pred HHHHHHh
Confidence 8888776
No 93
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.59 E-value=0.00018 Score=59.75 Aligned_cols=37 Identities=8% Similarity=0.179 Sum_probs=24.6
Q ss_pred HhCCCcEEEEcC---CcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 149 KFASSRIYIVTT---KQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 149 ~~~g~~l~IvTn---~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
+++|+++.++|| .+...+...++.+ |+....+.|+++
T Consensus 30 ~~~g~~~~~~Tnn~~r~~~~~~~~l~~~-g~~~~~~~iit~ 69 (249)
T TIGR01457 30 QKRDIPYLFVTNNSTRTPESVAEMLASF-DIPATLETVFTA 69 (249)
T ss_pred HHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCChhhEeeH
Confidence 356777888887 4466667777774 776555666665
No 94
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.58 E-value=9.1e-05 Score=61.13 Aligned_cols=53 Identities=25% Similarity=0.421 Sum_probs=45.7
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHH--HHHHhhCCCCC-CCCeEEeCCCC
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFAD--ALLRELAGVTI-PPDRIYGLGTG 189 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~--~~L~~~~gl~~-~F~~iv~~d~~ 189 (208)
....+|||+.++| +++|++++|+||+++.... ..|+++ |+.. +|+.|++++..
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~-gl~~~~~~~Ii~s~~~ 79 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL-GINADLPEMIISSGEI 79 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC-CCCccccceEEccHHH
Confidence 3567899999999 6789999999999988766 789995 9998 99999999754
No 95
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.58 E-value=0.00018 Score=60.71 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=24.2
Q ss_pred HhCCCcEEEEcCCc---HHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 149 KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 149 ~~~g~~l~IvTn~~---~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
++.|++++++||++ +......|+.+ |+....+.|+++
T Consensus 31 ~~~g~~~~~~Tnns~~~~~~~~~~l~~~-G~~~~~~~i~ts 70 (279)
T TIGR01452 31 ARAGKAALFVTNNSTKSRAEYALKFARL-GFNGLAEQLFSS 70 (279)
T ss_pred HHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCChhhEecH
Confidence 45788888888854 44444667774 876555566654
No 96
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.56 E-value=0.00017 Score=62.61 Aligned_cols=55 Identities=16% Similarity=0.073 Sum_probs=47.3
Q ss_pred hccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCC-------CCCCCCeEEeCCC
Q 028496 134 WIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG-------VTIPPDRIYGLGT 188 (208)
Q Consensus 134 ~~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~g-------l~~~F~~iv~~d~ 188 (208)
....+.++||+.++| ++.|++++|+||++...++.+|+.+.| +.++||.|+++..
T Consensus 179 p~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~ 243 (343)
T TIGR02244 179 PEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDAR 243 (343)
T ss_pred HHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCC
Confidence 344567799999999 688999999999999999999999327 8999999998864
No 97
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.55 E-value=0.00013 Score=54.57 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=44.5
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
.+.+||.|.++| +..|+-++.+|=+....+-..|+.+ ++..||+.++.-
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral-~~~~yFhy~Vie 90 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL-DLLQYFHYIVIE 90 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh-chhhhEEEEEec
Confidence 468999999999 6889999999999999999999995 999999998876
No 98
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.39 E-value=0.0003 Score=55.25 Aligned_cols=51 Identities=16% Similarity=0.041 Sum_probs=43.9
Q ss_pred HHHHhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHHHh
Q 028496 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 146 e~L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~~~ 202 (208)
..|++.|++++|+||++...++..++++ |+..+|+.+ .|||+++..+++++
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~l-gi~~~f~~~-----kpkp~~~~~~~~~l 94 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEEL-KIKRFHEGI-----KKKTEPYAQMLEEM 94 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHC-CCcEEEecC-----CCCHHHHHHHHHHc
Confidence 3446789999999999999999999995 999888642 29999999999885
No 99
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.37 E-value=0.00054 Score=53.61 Aligned_cols=59 Identities=20% Similarity=0.237 Sum_probs=46.8
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCc-HHHHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHHHHh
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEILLW 202 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~-~~~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l~~~ 202 (208)
...+|||+.++| ++.|++++|+||++ ...+..+++. +|+..++ ... |+|+++..++++.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~------~~~KP~p~~~~~~l~~~ 104 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP------HAVKPPGCAFRRAHPEM 104 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc------CCCCCChHHHHHHHHHc
Confidence 347899999999 67899999999999 6777777788 4875332 223 9999999999873
No 100
>PRK10444 UMP phosphatase; Provisional
Probab=97.35 E-value=0.00042 Score=57.67 Aligned_cols=16 Identities=31% Similarity=0.333 Sum_probs=13.8
Q ss_pred CceeeeecCccccCCc
Q 028496 2 ADLYALDFDGVLCDSC 17 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~ 17 (208)
+|+++||+||||+++.
T Consensus 1 ~~~v~~DlDGtL~~~~ 16 (248)
T PRK10444 1 IKNVICDIDGVLMHDN 16 (248)
T ss_pred CcEEEEeCCCceEeCC
Confidence 4789999999999887
No 101
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.33 E-value=0.00073 Score=56.27 Aligned_cols=29 Identities=14% Similarity=0.153 Sum_probs=25.0
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
+++|++++|+|+.+...+...++.+ ++..
T Consensus 33 ~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~ 61 (270)
T PRK10513 33 RAKGVNVVLTTGRPYAGVHRYLKEL-HMEQ 61 (270)
T ss_pred HHCCCEEEEecCCChHHHHHHHHHh-CCCC
Confidence 4678999999999999999999995 8864
No 102
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.18 E-value=0.0022 Score=49.69 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=22.9
Q ss_pred CCHHHHH---HhCCCcEEEEcCCcHHHHH---HHHHh
Q 028496 142 PGIPDAL---KFASSRIYIVTTKQSRFAD---ALLRE 172 (208)
Q Consensus 142 pgv~e~L---~~~g~~l~IvTn~~~~~~~---~~L~~ 172 (208)
|++.+++ +++|+++.++|+.+...+. ..|..
T Consensus 30 ~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 30 PGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 5555555 4679999999999987764 55655
No 103
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.18 E-value=0.00068 Score=52.16 Aligned_cols=53 Identities=11% Similarity=0.044 Sum_probs=44.3
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHHHh
Q 028496 144 IPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 144 v~e~L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~~~ 202 (208)
+.+.|+++|++++|+||++...+...++++ |+..+|+. . .|||+++.++++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~-gi~~~~~~----~-~~k~~~~~~~~~~~ 88 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL-GITHLYQG----Q-SNKLIAFSDILEKL 88 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc-CCCEEEec----c-cchHHHHHHHHHHc
Confidence 455567889999999999999999999995 99877752 1 29999999999874
No 104
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.18 E-value=0.00067 Score=52.52 Aligned_cols=53 Identities=17% Similarity=0.135 Sum_probs=45.1
Q ss_pred cCCCCCCCHHHHHH--hCCCcEEEEcCCcHHHHHHHHHhhCCCC-CCC-CeEEeCCCC
Q 028496 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLGTG 189 (208)
Q Consensus 136 ~~~~~~pgv~e~L~--~~g~~l~IvTn~~~~~~~~~L~~~~gl~-~~F-~~iv~~d~~ 189 (208)
..+.++||+.++|. +.++.++|+||+++.++..+++.+ +.. .+| +.+++.+++
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~l-dp~~~~F~~ri~~rd~~ 111 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLI-DPDGKYFGDRIISRDES 111 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHh-CcCCCeeccEEEEeccC
Confidence 45689999999992 456999999999999999999996 988 588 678888764
No 105
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.14 E-value=0.00049 Score=57.86 Aligned_cols=50 Identities=34% Similarity=0.505 Sum_probs=32.6
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHH---HHHHHHhhCCCCCCCCeEEeCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGLGT 188 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~---~~~~L~~~~gl~~~F~~iv~~d~ 188 (208)
.++||+.++| +++|.++.++||++... ....|+.+.+++.-.+.|+++..
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~ 79 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGD 79 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHH
Confidence 4567777777 57889999999977653 33455552255455677777643
No 106
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.11 E-value=0.00075 Score=53.67 Aligned_cols=53 Identities=17% Similarity=0.120 Sum_probs=29.5
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCCcHH-------HHHHHHHhhCCCCCCCCeEEeCC
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSR-------FADALLRELAGVTIPPDRIYGLG 187 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~-------~~~~~L~~~~gl~~~F~~iv~~d 187 (208)
....+|+||+.++| .+.|..+.++|+.+.. ....-|++++|-..+-+.+++.+
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~ 131 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD 131 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC
Confidence 45679999999999 4677677777766532 34445555335333334555554
No 107
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.09 E-value=0.00028 Score=60.82 Aligned_cols=14 Identities=43% Similarity=0.619 Sum_probs=13.3
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
+++||+||||+++.
T Consensus 2 ~~ifD~DGvL~~g~ 15 (321)
T TIGR01456 2 GFAFDIDGVLFRGK 15 (321)
T ss_pred EEEEeCcCceECCc
Confidence 58999999999999
No 108
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.97 E-value=0.0017 Score=55.19 Aligned_cols=30 Identities=17% Similarity=0.218 Sum_probs=25.6
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
+++|++++++|+++...+..+.+.+ ++..+
T Consensus 31 k~~GI~vVlaTGRt~~ev~~l~~~L-gl~~p 60 (302)
T PRK12702 31 ERRSIPLVLYSLRTRAQLEHLCRQL-RLEHP 60 (302)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHh-CCCCe
Confidence 4678999999999999999999995 88754
No 109
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.90 E-value=0.0076 Score=47.75 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=34.5
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCC
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG 175 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~g 175 (208)
..+..=||.+++. +.++++..|+|++....+..+++.+ +
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~i-v 111 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGI-V 111 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhh-c
Confidence 4567889999998 6889999999999999999999985 5
No 110
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.81 E-value=0.0029 Score=51.77 Aligned_cols=30 Identities=30% Similarity=0.268 Sum_probs=24.8
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
++.|+++.++|+++...+...++.+ |+..+
T Consensus 28 ~~~G~~~vi~TgR~~~~~~~~~~~l-g~~~~ 57 (225)
T TIGR02461 28 KDLGFPIVFVSSKTRAEQEYYREEL-GVEPP 57 (225)
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHHc-CCCCc
Confidence 4578999999999999888899995 88653
No 111
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=96.76 E-value=0.0034 Score=51.70 Aligned_cols=13 Identities=38% Similarity=0.626 Sum_probs=10.9
Q ss_pred eeeecCccccCCc
Q 028496 5 YALDFDGVLCDSC 17 (208)
Q Consensus 5 viFD~DGTLvDs~ 17 (208)
++||+||||+|+.
T Consensus 1 ~lfD~DGvL~~~~ 13 (236)
T TIGR01460 1 FLFDIDGVLWLGH 13 (236)
T ss_pred CEEeCcCccCcCC
Confidence 5788888888888
No 112
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.75 E-value=0.017 Score=47.52 Aligned_cols=49 Identities=16% Similarity=0.071 Sum_probs=39.0
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHH---HHHHHHhhCCCCCCCCeEEeC
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~---~~~~L~~~~gl~~~F~~iv~~ 186 (208)
...++.|++.+++ ++.|+++.++||.+... +..-|.+ .|+..+ +.++-.
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR 171 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILR 171 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-Ceeeec
Confidence 4678999999999 57899999999999766 7777888 488754 665554
No 113
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.57 E-value=0.0052 Score=49.63 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=24.7
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
++.|++++++||++...+...++.+ |+.
T Consensus 29 ~~~gi~~~i~TgR~~~~~~~~~~~l-~~~ 56 (221)
T TIGR02463 29 QEAGIPVILCTSKTAAEVEYLQKAL-GLT 56 (221)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHc-CCC
Confidence 4678999999999999999999995 886
No 114
>PRK10976 putative hydrolase; Provisional
Probab=96.54 E-value=0.002 Score=53.56 Aligned_cols=27 Identities=30% Similarity=0.237 Sum_probs=21.8
Q ss_pred CCceeeeecCccccCCcchhhHHHHHH
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKA 27 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~ 27 (208)
|+|++++|+||||+|+.+.....+..+
T Consensus 1 mikli~~DlDGTLl~~~~~is~~~~~a 27 (266)
T PRK10976 1 MYQVVASDLDGTLLSPDHTLSPYAKET 27 (266)
T ss_pred CceEEEEeCCCCCcCCCCcCCHHHHHH
Confidence 789999999999999986666555444
No 115
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.54 E-value=0.0021 Score=53.72 Aligned_cols=27 Identities=30% Similarity=0.305 Sum_probs=21.6
Q ss_pred CCceeeeecCccccCCcchhhHHHHHH
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKA 27 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~ 27 (208)
|+|+++||+||||+++.+.....+..+
T Consensus 1 m~kli~~DlDGTLl~~~~~i~~~~~~a 27 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDHHLGEKTLST 27 (272)
T ss_pred CccEEEEeCCCcCcCCCCcCCHHHHHH
Confidence 889999999999999886566555433
No 116
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.53 E-value=0.002 Score=52.23 Aligned_cols=26 Identities=38% Similarity=0.474 Sum_probs=20.0
Q ss_pred CceeeeecCccccCCcchhhHHHHHH
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVKA 27 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~~ 27 (208)
.|+++||+||||+|+.+.....+..+
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~a 28 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEA 28 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHH
Confidence 69999999999999986555444433
No 117
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=96.52 E-value=0.034 Score=50.84 Aligned_cols=37 Identities=14% Similarity=0.259 Sum_probs=28.0
Q ss_pred CCCCHHHHHHhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 140 FYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 140 ~~pgv~e~L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
+.|.+.+.+++.|. .+|+|.+++..++...+.+.|++
T Consensus 111 l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 111 VHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred cCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCC
Confidence 56667777766664 49999999999999997623765
No 118
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.27 E-value=0.015 Score=48.86 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=35.6
Q ss_pred ccCCCCCCCHHHHH---HhCCCcEEEEcCCcHH---HHHHHHHhhCCCCCCCCeEEe
Q 028496 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYG 185 (208)
Q Consensus 135 ~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~---~~~~~L~~~~gl~~~F~~iv~ 185 (208)
....++.||+.+++ ++.|+++.++||.+.. .+..-|.+ .|...+ +.++-
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiL 195 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLIL 195 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeee
Confidence 34678999999998 5789999999999864 34555666 477543 55443
No 119
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.21 E-value=0.004 Score=51.67 Aligned_cols=27 Identities=26% Similarity=0.271 Sum_probs=20.6
Q ss_pred CCceeeeecCccccCCcchhhHHHHHH
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKA 27 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~ 27 (208)
+.|+++||+||||+++.+.....+..+
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~a 28 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEA 28 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHH
Confidence 169999999999999886655555433
No 120
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.17 E-value=0.012 Score=48.73 Aligned_cols=29 Identities=24% Similarity=0.243 Sum_probs=23.9
Q ss_pred hCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 150 FASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 150 ~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
+.|++++++|+++...+...++.+ |+..+
T Consensus 30 ~~g~~~~~~TgR~~~~~~~~~~~~-~~~~~ 58 (256)
T TIGR01486 30 ELGIPVIPCTSKTAAEVEYLRKEL-GLEDP 58 (256)
T ss_pred HCCCeEEEEcCCCHHHHHHHHHHc-CCCCc
Confidence 568899999999999999999995 87543
No 121
>PTZ00174 phosphomannomutase; Provisional
Probab=95.96 E-value=0.0065 Score=50.28 Aligned_cols=25 Identities=16% Similarity=0.239 Sum_probs=19.8
Q ss_pred CceeeeecCccccCCcchhhHHHHH
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAVK 26 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~~ 26 (208)
.|+|+||+||||+|+.+..+..+..
T Consensus 5 ~klia~DlDGTLL~~~~~is~~~~~ 29 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRNPITQEMKD 29 (247)
T ss_pred CeEEEEECcCCCcCCCCCCCHHHHH
Confidence 3899999999999998766655443
No 122
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=95.90 E-value=0.021 Score=45.15 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=41.2
Q ss_pred HHhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHHHh
Q 028496 148 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 148 L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~~~ 202 (208)
|+++|++++|+||++...+..+++.+ |+..+|+ +. .+||+.+..+++++
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~l-gl~~~f~---g~--~~k~~~l~~~~~~~ 108 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTTL-GITHLYQ---GQ--SNKLIAFSDLLEKL 108 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHHc-CCceeec---CC--CcHHHHHHHHHHHh
Confidence 35689999999999999999999995 9987775 21 18999999999874
No 123
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.86 E-value=0.0076 Score=48.51 Aligned_cols=49 Identities=10% Similarity=-0.107 Sum_probs=30.0
Q ss_pred CcEEEEcCCcHHHHHHHHHhhCCCCCCCC---eEEeCCCCCCHHHHHHHHHHh
Q 028496 153 SRIYIVTTKQSRFADALLRELAGVTIPPD---RIYGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 153 ~~l~IvTn~~~~~~~~~L~~~~gl~~~F~---~iv~~d~~PkPe~l~~~l~~~ 202 (208)
..++++++.....+...++. .++..++. .-+....+.|...+..+++++
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 34556677777778888887 47654321 112222228888888888764
No 124
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=95.85 E-value=0.019 Score=44.51 Aligned_cols=51 Identities=18% Similarity=0.044 Sum_probs=43.8
Q ss_pred CCCCCCHHHHHH--hCCCcEEEEcCCcHHHHHHHHHhhCCCCC-CCCeEEeCCCC
Q 028496 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTG 189 (208)
Q Consensus 138 ~~~~pgv~e~L~--~~g~~l~IvTn~~~~~~~~~L~~~~gl~~-~F~~iv~~d~~ 189 (208)
+..-||+.++|. ...+.++|.|++++.+++.+++++ +... +|+.+++.+++
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~l-dp~~~~f~~~l~r~~~ 94 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDIL-DRGGKVISRRLYRESC 94 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHH-CcCCCEEeEEEEcccc
Confidence 456799999992 345999999999999999999996 9876 89999998876
No 125
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.83 E-value=0.041 Score=46.47 Aligned_cols=40 Identities=15% Similarity=-0.004 Sum_probs=35.4
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG 189 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~ 189 (208)
++.|.-+++=|.+.++.+...|+. .+|.++|+.|++....
T Consensus 155 k~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G~~ 194 (297)
T PF05152_consen 155 KEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGGNK 194 (297)
T ss_pred HHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCCcc
Confidence 677888999999999999999999 5999999999987543
No 126
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=95.82 E-value=0.089 Score=41.77 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=28.0
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHH
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALL 170 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L 170 (208)
+.++||++.+.| ++.|+++.|-|+++....+-..
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~F 137 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFF 137 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhh
Confidence 468999999999 5789999999999976554443
No 127
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.80 E-value=0.015 Score=41.58 Aligned_cols=49 Identities=24% Similarity=0.341 Sum_probs=34.8
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcH---HHHHHHHHhhCCCCCCCCeEEeC
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~---~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
...++||+.++| ++.|+++.++||++. ......|+.+ |+.--.+.|+++
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~-Gi~~~~~~i~ts 66 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL-GIPVDEDEIITS 66 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT-TTT--GGGEEEH
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc-CcCCCcCEEECh
Confidence 457899999999 688999999999873 3455667884 987555666665
No 128
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=95.80 E-value=0.12 Score=47.00 Aligned_cols=33 Identities=9% Similarity=0.065 Sum_probs=26.0
Q ss_pred HHHHHHhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 144 IPDALKFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 144 v~e~L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
..+..++.| +.+|+|.+++..++..++.+.|.+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 445555667 999999999999999999953653
No 129
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.66 E-value=0.0092 Score=49.53 Aligned_cols=28 Identities=39% Similarity=0.434 Sum_probs=21.9
Q ss_pred CCceeeeecCccccCCcchhhHHHHHHH
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKAA 28 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~~ 28 (208)
|.|+|+||+||||+++.......+..+.
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al 29 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEAL 29 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHH
Confidence 5689999999999999976665554443
No 130
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=95.57 E-value=0.018 Score=53.28 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=47.9
Q ss_pred CCCCCCCHHHHH---HhCC-CcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHH
Q 028496 137 ANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEIL 200 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g-~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~ 200 (208)
...++||+.++| ++.| ++++|+||+++..++.+++++ |+.++|..+.. .+|++.+.++.+
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l-gi~~~f~~~~p---~~K~~~v~~l~~ 445 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL-GIDEVHAELLP---EDKLAIVKELQE 445 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh-CCCeeeccCCH---HHHHHHHHHHHH
Confidence 457899999999 6789 999999999999999999995 99887764311 167776666654
No 131
>PLN02423 phosphomannomutase
Probab=95.40 E-value=0.014 Score=48.42 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=18.8
Q ss_pred eeeeecCccccCCcchhhHHHHHHHH
Q 028496 4 LYALDFDGVLCDSCGESSLSAVKAAK 29 (208)
Q Consensus 4 ~viFD~DGTLvDs~~~~~~~~~~~~~ 29 (208)
.++|||||||+|+.+.+...+..+..
T Consensus 9 i~~~D~DGTLl~~~~~i~~~~~~ai~ 34 (245)
T PLN02423 9 IALFDVDGTLTAPRKEATPEMLEFMK 34 (245)
T ss_pred EEEEeccCCCcCCCCcCCHHHHHHHH
Confidence 44499999999999766666544433
No 132
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=95.18 E-value=0.0095 Score=48.99 Aligned_cols=41 Identities=12% Similarity=0.263 Sum_probs=32.3
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHH---HHHHHHHhhCCCCC
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTI 178 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~---~~~~~L~~~~gl~~ 178 (208)
..+++||+.+++ ++.|+.+.++||.+.. .+..-|.+. |...
T Consensus 113 ~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~-G~~~ 159 (229)
T PF03767_consen 113 KAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA-GFPG 159 (229)
T ss_dssp GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH-TTST
T ss_pred cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc-CCCc
Confidence 348899999999 5899999999997654 555668884 8653
No 133
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=95.18 E-value=0.026 Score=52.07 Aligned_cols=60 Identities=17% Similarity=0.208 Sum_probs=47.7
Q ss_pred CCCCCCCHHHHH---HhCCC-cEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHH
Q 028496 137 ANRFYPGIPDAL---KFASS-RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEIL 200 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~-~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~ 200 (208)
..+++||+.++| ++.|+ +++|+||++...++..++++ |+.++|..+.. .+|++.+.++.+
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l-gi~~~f~~~~p---~~K~~~i~~l~~ 423 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL-GIDEVHAELLP---EDKLEIVKELRE 423 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc-CChhhhhccCc---HHHHHHHHHHHh
Confidence 457899999999 68899 99999999999999999995 99888753321 166776666544
No 134
>PLN02887 hydrolase family protein
Probab=95.06 E-value=0.02 Score=53.36 Aligned_cols=27 Identities=30% Similarity=0.256 Sum_probs=21.5
Q ss_pred CCceeeeecCccccCCcchhhHHHHHH
Q 028496 1 MADLYALDFDGVLCDSCGESSLSAVKA 27 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~~~~~~~~~~~ 27 (208)
|+|+|+||+||||+|+.+.....+..+
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eA 333 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKA 333 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHH
Confidence 468999999999999986666665544
No 135
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=94.97 E-value=0.018 Score=46.31 Aligned_cols=48 Identities=8% Similarity=-0.096 Sum_probs=26.9
Q ss_pred cEEEEcCCcHHHHHHHHHhhCCCCCCC---C-eE-EeCCCCCCHHHHHHHHHHh
Q 028496 154 RIYIVTTKQSRFADALLRELAGVTIPP---D-RI-YGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 154 ~l~IvTn~~~~~~~~~L~~~~gl~~~F---~-~i-v~~d~~PkPe~l~~~l~~~ 202 (208)
...+.+....+.+...++.+ +..-.+ . .+ +....++|+..+..+++++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 161 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKEL-GLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKL 161 (225)
T ss_pred eEEEeecCCHHHHHHHHHhc-CceEEEecCCcEEEEeeCCCCHHHHHHHHHHHh
Confidence 34556666667777778774 653110 0 00 0111118889999988874
No 136
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=94.70 E-value=0.017 Score=43.11 Aligned_cols=15 Identities=13% Similarity=0.220 Sum_probs=13.6
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
|+|+||+||||.++.
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 799999999999865
No 137
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.51 E-value=0.033 Score=46.57 Aligned_cols=24 Identities=33% Similarity=0.235 Sum_probs=17.8
Q ss_pred CceeeeecCccccCCcchhhHHHH
Q 028496 2 ADLYALDFDGVLCDSCGESSLSAV 25 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~~ 25 (208)
+++|++|+||||+|+.+..+..+.
T Consensus 7 ~~lI~~DlDGTLL~~~~~i~~~~~ 30 (271)
T PRK03669 7 PLLIFTDLDGTLLDSHTYDWQPAA 30 (271)
T ss_pred CeEEEEeCccCCcCCCCcCcHHHH
Confidence 368999999999998754444443
No 138
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.49 E-value=0.21 Score=39.57 Aligned_cols=62 Identities=27% Similarity=0.283 Sum_probs=47.2
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcC---------------CcHHHHHHHHHhhCCCCCCCCeEEeCCCC---------CC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTT---------------KQSRFADALLRELAGVTIPPDRIYGLGTG---------LV 191 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn---------------~~~~~~~~~L~~~~gl~~~F~~iv~~d~~---------Pk 191 (208)
.+.||+.+.| .+.|++++|+|| ..+..+...|+. .|. -|+.|+.+-+. |+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP~ 107 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKPK 107 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCCC
Confidence 5689999998 588999999999 234456677777 476 57776654221 99
Q ss_pred HHHHHHHHHHhh
Q 028496 192 LSMLLGEILLWL 203 (208)
Q Consensus 192 Pe~l~~~l~~~~ 203 (208)
|-++..+++++.
T Consensus 108 ~gm~~~~~~~~~ 119 (181)
T COG0241 108 PGMLLSALKEYN 119 (181)
T ss_pred hHHHHHHHHHhC
Confidence 999999999875
No 139
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.40 E-value=0.0049 Score=50.76 Aligned_cols=60 Identities=7% Similarity=-0.058 Sum_probs=47.8
Q ss_pred CCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeE--EeCCCC----CCHHHHHHHHHHh
Q 028496 141 YPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRI--YGLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 141 ~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~i--v~~d~~----PkPe~l~~~l~~~ 202 (208)
||++.+++ .++|+++ |+||++.......+.. .|...+|..+ .|.+.. |+|+++..++++.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~ 208 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKEC 208 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHc
Confidence 78888888 3578887 9999999888777888 4888777765 566543 9999999999875
No 140
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.14 E-value=0.043 Score=44.15 Aligned_cols=23 Identities=35% Similarity=0.436 Sum_probs=17.4
Q ss_pred eeeecCccccCCcchhhHHHHHH
Q 028496 5 YALDFDGVLCDSCGESSLSAVKA 27 (208)
Q Consensus 5 viFD~DGTLvDs~~~~~~~~~~~ 27 (208)
|+||+||||+++.+.....+..+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~a 23 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEA 23 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHH
T ss_pred cEEEECCceecCCCeeCHHHHHH
Confidence 68999999999886655554433
No 141
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=93.94 E-value=0.024 Score=43.48 Aligned_cols=16 Identities=50% Similarity=0.655 Sum_probs=13.9
Q ss_pred CceeeeecCccccCCc
Q 028496 2 ADLYALDFDGVLCDSC 17 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~ 17 (208)
.|+|+||+||||+|..
T Consensus 1 ~~~~~~D~Dgtl~~~~ 16 (154)
T TIGR01670 1 IRLLILDVDGVLTDGK 16 (154)
T ss_pred CeEEEEeCceeEEcCe
Confidence 3789999999999964
No 142
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=93.93 E-value=0.025 Score=44.66 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=13.9
Q ss_pred CceeeeecCccccCC
Q 028496 2 ADLYALDFDGVLCDS 16 (208)
Q Consensus 2 ~~~viFD~DGTLvDs 16 (208)
+|+|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 589999999999997
No 143
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=93.87 E-value=0.05 Score=44.89 Aligned_cols=22 Identities=32% Similarity=0.327 Sum_probs=16.6
Q ss_pred eeeeecCccccCCcchhhHHHH
Q 028496 4 LYALDFDGVLCDSCGESSLSAV 25 (208)
Q Consensus 4 ~viFD~DGTLvDs~~~~~~~~~ 25 (208)
+++||+||||+++.+.....+.
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~ 22 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTK 22 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHH
Confidence 4789999999998755554443
No 144
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=93.18 E-value=0.19 Score=46.71 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=44.3
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHHH
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEIL 200 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l~ 200 (208)
.+++||+.+++ ++.|++++|+||+++..++.+++.+ |+. +++.-.. +|++.+.++.+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l-gi~-----~~~~~~p~~K~~~v~~l~~ 464 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL-GIN-----VRAEVLPDDKAALIKELQE 464 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-CCc-----EEccCChHHHHHHHHHHHH
Confidence 46899999998 6789999999999999999999995 995 3322122 67777666554
No 145
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=92.27 E-value=0.05 Score=41.60 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=38.5
Q ss_pred CCCCCCHHHHHH--hCCCcEEEEcCCcHHHHHHHHHhhCCC-CCCCCeEEeCCCC
Q 028496 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV-TIPPDRIYGLGTG 189 (208)
Q Consensus 138 ~~~~pgv~e~L~--~~g~~l~IvTn~~~~~~~~~L~~~~gl-~~~F~~iv~~d~~ 189 (208)
+.+-||+.++|+ ...+.++|.|++++.+++.+++.+ .- ..+|+.+++.+++
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~l-dp~~~~~~~~~~r~~~ 88 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDAL-DPNGKLFSRRLYRDDC 88 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHH-TTTTSSEEEEEEGGGS
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhh-hhhccccccccccccc
Confidence 455799999982 455999999999999999999996 65 4678888877654
No 146
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=92.14 E-value=0.072 Score=41.20 Aligned_cols=17 Identities=47% Similarity=0.589 Sum_probs=15.5
Q ss_pred CCceeeeecCccccCCc
Q 028496 1 MADLYALDFDGVLCDSC 17 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~ 17 (208)
|+|++|||.||||.|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 46899999999999987
No 147
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.11 E-value=0.13 Score=40.71 Aligned_cols=14 Identities=43% Similarity=0.655 Sum_probs=12.3
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
+++||+||||+++.
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 47899999999875
No 148
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=91.80 E-value=0.078 Score=37.81 Aligned_cols=13 Identities=38% Similarity=0.810 Sum_probs=12.1
Q ss_pred eeeecCccccCCc
Q 028496 5 YALDFDGVLCDSC 17 (208)
Q Consensus 5 viFD~DGTLvDs~ 17 (208)
++||+||||++..
T Consensus 1 ~l~D~dGvl~~g~ 13 (101)
T PF13344_consen 1 FLFDLDGVLYNGN 13 (101)
T ss_dssp EEEESTTTSEETT
T ss_pred CEEeCccEeEeCC
Confidence 6899999999988
No 149
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=91.57 E-value=0.081 Score=40.96 Aligned_cols=60 Identities=23% Similarity=0.243 Sum_probs=35.4
Q ss_pred CCCHHHHH---HhCCCcEEEEcCC---c-----------HHHHHHHHHhhCCCCCCCCeEEeCCC--C--CCHHHHHHHH
Q 028496 141 YPGIPDAL---KFASSRIYIVTTK---Q-----------SRFADALLRELAGVTIPPDRIYGLGT--G--LVLSMLLGEI 199 (208)
Q Consensus 141 ~pgv~e~L---~~~g~~l~IvTn~---~-----------~~~~~~~L~~~~gl~~~F~~iv~~d~--~--PkPe~l~~~l 199 (208)
.|+|.+.| .+.||.++|+||- . ...+..+++.+ |+. +...++... . |+|-++..++
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l-~ip--~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL-GIP--IQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC-TS---EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc-CCc--eEEEecCCCCCCCCCchhHHHHHH
Confidence 35677777 4778899999884 1 13455666663 654 322333222 2 8888888777
Q ss_pred HHhh
Q 028496 200 LLWL 203 (208)
Q Consensus 200 ~~~~ 203 (208)
+.++
T Consensus 108 ~~~~ 111 (159)
T PF08645_consen 108 KDYN 111 (159)
T ss_dssp CCTS
T ss_pred Hhcc
Confidence 6654
No 150
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.55 E-value=1.5 Score=33.91 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=16.9
Q ss_pred CCHHHHH---HhCCCcEEEEcCCcHHH
Q 028496 142 PGIPDAL---KFASSRIYIVTTKQSRF 165 (208)
Q Consensus 142 pgv~e~L---~~~g~~l~IvTn~~~~~ 165 (208)
||+.++. ++.||++.=+|+.+-..
T Consensus 30 ~g~~~l~~~i~~~GY~ilYlTaRp~~q 56 (157)
T PF08235_consen 30 PGAAELYRKIADNGYKILYLTARPIGQ 56 (157)
T ss_pred hcHHHHHHHHHHCCeEEEEECcCcHHH
Confidence 5666665 47788888888887543
No 151
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=91.52 E-value=0.09 Score=41.21 Aligned_cols=16 Identities=44% Similarity=0.636 Sum_probs=14.5
Q ss_pred CceeeeecCccccCCc
Q 028496 2 ADLYALDFDGVLCDSC 17 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~ 17 (208)
.|+++||+||||.|..
T Consensus 7 i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 7 IKLVILDVDGVMTDGR 22 (169)
T ss_pred CeEEEEeCceeeECCe
Confidence 4799999999999995
No 152
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=91.19 E-value=0.21 Score=41.62 Aligned_cols=47 Identities=26% Similarity=0.323 Sum_probs=35.5
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHH---HHHHHHHhhCCCCCCCCeEEeC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~---~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
.++||+.++| +++|++++++||++.. .....|+.+ |+.--.+.|+++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~-g~~~~~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL-GFDISEDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc-CCCCCHHHeEcH
Confidence 3789999999 6789999999996655 467778884 876444556655
No 153
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=90.61 E-value=1 Score=35.19 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=44.6
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHHH
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEILL 201 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~~ 201 (208)
.-|.+.+.+ +..|+++.|+||+.+..+....+++ |+ ++|..+-. |.|-.+.++++.
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l-~v----~fi~~A~K-P~~~~fr~Al~~ 105 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-GV----PFIYRAKK-PFGRAFRRALKE 105 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc-CC----ceeecccC-ccHHHHHHHHHH
Confidence 345555555 6889999999999999999999995 75 66777644 888899988876
No 154
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=90.22 E-value=0.59 Score=45.86 Aligned_cols=47 Identities=19% Similarity=0.243 Sum_probs=41.6
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
++.||+.+++ ++.|+++.++|+.....+..+.+. .|+...++.++++
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g 577 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSG 577 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEh
Confidence 7799999999 688999999999999999999999 5998877766555
No 155
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=90.22 E-value=0.028 Score=47.37 Aligned_cols=61 Identities=13% Similarity=0.069 Sum_probs=41.8
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHH-HHHHHhhCCCCCCCCeEE---eCCCC----CCHHHHHHHHHHh
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFA-DALLRELAGVTIPPDRIY---GLGTG----LVLSMLLGEILLW 202 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~-~~~L~~~~gl~~~F~~iv---~~d~~----PkPe~l~~~l~~~ 202 (208)
-|+|+.+++ ++.|. ++|+||++.... ...+.. .|+..+|+.+. +.+.. |+|+++..+++++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~ 215 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENF 215 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHh
Confidence 488988888 45565 899999987543 223344 36667776654 33332 9999999999875
No 156
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=89.94 E-value=0.27 Score=46.53 Aligned_cols=23 Identities=26% Similarity=0.265 Sum_probs=17.1
Q ss_pred CceeeeecCccccCCcchhhHHH
Q 028496 2 ADLYALDFDGVLCDSCGESSLSA 24 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~~~~~~~ 24 (208)
.|+|++|+||||+|+.+..+..+
T Consensus 416 ~KLIfsDLDGTLLd~d~~i~~~t 438 (694)
T PRK14502 416 KKIVYTDLDGTLLNPLTYSYSTA 438 (694)
T ss_pred eeEEEEECcCCCcCCCCccCHHH
Confidence 37899999999999865443333
No 157
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.09 E-value=0.2 Score=42.05 Aligned_cols=13 Identities=31% Similarity=0.667 Sum_probs=11.7
Q ss_pred eeeeecCccccCC
Q 028496 4 LYALDFDGVLCDS 16 (208)
Q Consensus 4 ~viFD~DGTLvDs 16 (208)
+|+||+||||++.
T Consensus 16 li~~D~DGTLl~~ 28 (266)
T PRK10187 16 AWFFDLDGTLAEI 28 (266)
T ss_pred EEEEecCCCCCCC
Confidence 7889999999984
No 158
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=88.84 E-value=0.19 Score=41.34 Aligned_cols=15 Identities=27% Similarity=0.654 Sum_probs=12.6
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
.+++||+||||+...
T Consensus 4 ~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 4 RAFFFDYDGTLSEIV 18 (244)
T ss_pred EEEEEecCccccCCc
Confidence 578999999999753
No 159
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=87.66 E-value=0.75 Score=41.61 Aligned_cols=49 Identities=18% Similarity=0.255 Sum_probs=36.0
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCC--------CCCCCCeEEeCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG--------VTIPPDRIYGLG 187 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~g--------l~~~F~~iv~~d 187 (208)
..-|.+..+| ++.|.++.++||++-.++...++.+.| +.++||.|++..
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A 242 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDA 242 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES-
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcC
Confidence 3456777777 688999999999999999999998654 458999988764
No 160
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=87.56 E-value=0.27 Score=40.10 Aligned_cols=17 Identities=24% Similarity=0.182 Sum_probs=13.4
Q ss_pred eeeeecCccccCCcchh
Q 028496 4 LYALDFDGVLCDSCGES 20 (208)
Q Consensus 4 ~viFD~DGTLvDs~~~~ 20 (208)
+|++||||||+|+....
T Consensus 1 li~~DlDgTLl~~~~~~ 17 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGL 17 (236)
T ss_pred CeEEeccccccCCHHHH
Confidence 47889999999976433
No 161
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=87.22 E-value=2.3 Score=35.35 Aligned_cols=44 Identities=14% Similarity=0.236 Sum_probs=34.5
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHH----HHHHHHhhCCCCCCC
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRF----ADALLRELAGVTIPP 180 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~----~~~~L~~~~gl~~~F 180 (208)
....+.||+.|+| ...|..+.-+||...+. +..-|.++ |+...-
T Consensus 119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~-g~~~~~ 169 (274)
T COG2503 119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE-GLPQVL 169 (274)
T ss_pred cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc-Cccccc
Confidence 4578999999999 47899999999998876 45556773 776544
No 162
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=87.19 E-value=0.091 Score=40.75 Aligned_cols=15 Identities=27% Similarity=0.430 Sum_probs=13.7
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
++++||.||||+++.
T Consensus 2 ~~~~~d~dg~l~~~~ 16 (161)
T TIGR01261 2 KILFIDRDGTLIEEP 16 (161)
T ss_pred CEEEEeCCCCccccC
Confidence 689999999999976
No 163
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=86.11 E-value=1 Score=34.22 Aligned_cols=15 Identities=40% Similarity=0.623 Sum_probs=13.1
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
|+++||+||||+.+.
T Consensus 1 k~LVlDLD~TLv~~~ 15 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSS 15 (159)
T ss_dssp EEEEEE-CTTTEEEE
T ss_pred CEEEEeCCCcEEEEe
Confidence 579999999999999
No 164
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=84.50 E-value=0.99 Score=37.10 Aligned_cols=13 Identities=8% Similarity=-0.432 Sum_probs=10.8
Q ss_pred CCHHHHHHHHHHh
Q 028496 190 LVLSMLLGEILLW 202 (208)
Q Consensus 190 PkPe~l~~~l~~~ 202 (208)
+|+..+..++++|
T Consensus 167 ~K~~al~~l~~~~ 179 (249)
T TIGR01485 167 GKGQALQYLLQKL 179 (249)
T ss_pred ChHHHHHHHHHHc
Confidence 8888888888775
No 165
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=82.37 E-value=0.76 Score=34.80 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=13.6
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
..+++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 579999999999996
No 166
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=82.15 E-value=0.69 Score=38.95 Aligned_cols=15 Identities=40% Similarity=0.687 Sum_probs=13.7
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
++++||+||||.+-.
T Consensus 19 ~~~~lDyDGTl~~i~ 33 (266)
T COG1877 19 RLLFLDYDGTLTEIV 33 (266)
T ss_pred eEEEEeccccccccc
Confidence 589999999999887
No 167
>PRK10671 copA copper exporting ATPase; Provisional
Probab=82.14 E-value=1.3 Score=43.06 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=43.3
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHH
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEI 199 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l 199 (208)
.+++||+.++| ++.|++++++|+..+..++.+.+.+ |+.++|..+ .. +|++.+..+.
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l-gi~~~~~~~----~p~~K~~~i~~l~ 709 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA-GIDEVIAGV----LPDGKAEAIKRLQ 709 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCCEEEeCC----CHHHHHHHHHHHh
Confidence 36789999998 6789999999999999999999995 997644321 11 5666555543
No 168
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=81.45 E-value=1.4 Score=33.97 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=11.8
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
|.+.||+||||+-+.
T Consensus 1 Kia~fD~DgTLi~~~ 15 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTK 15 (159)
T ss_dssp SEEEE-SCTTTEE-S
T ss_pred CEEEEeCCCCccCCC
Confidence 568999999999998
No 169
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=80.89 E-value=0.85 Score=36.61 Aligned_cols=15 Identities=40% Similarity=0.456 Sum_probs=13.8
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
++++.|+||||+|+.
T Consensus 22 klLVLDLDeTLvh~~ 36 (195)
T TIGR02245 22 KLLVLDIDYTLFDHR 36 (195)
T ss_pred cEEEEeCCCceEccc
Confidence 689999999999985
No 170
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=79.65 E-value=0.89 Score=43.57 Aligned_cols=14 Identities=43% Similarity=0.669 Sum_probs=12.6
Q ss_pred ceeeeecCccccCC
Q 028496 3 DLYALDFDGVLCDS 16 (208)
Q Consensus 3 ~~viFD~DGTLvDs 16 (208)
++++||+||||++.
T Consensus 493 rLi~~D~DGTL~~~ 506 (726)
T PRK14501 493 RLLLLDYDGTLVPF 506 (726)
T ss_pred eEEEEecCccccCC
Confidence 68999999999984
No 171
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=79.50 E-value=1 Score=44.03 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=14.3
Q ss_pred CCceeeeecCccccCCc
Q 028496 1 MADLYALDFDGVLCDSC 17 (208)
Q Consensus 1 m~~~viFD~DGTLvDs~ 17 (208)
|.+++++|+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 35789999999999665
No 172
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=78.89 E-value=7.6 Score=33.23 Aligned_cols=43 Identities=26% Similarity=0.473 Sum_probs=31.6
Q ss_pred CCCCCCCHHHHH---HhCC-CcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 137 ANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g-~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
...+||...+++ ++.| .+++|+||++. ...++.+ . .+|.++-+
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L-~---~~dql~~s 136 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEEL-K---LPDQLYVS 136 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHh-c---cCCEEEEE
Confidence 457899999998 6777 79999999998 4455553 3 46665544
No 173
>PLN02580 trehalose-phosphatase
Probab=78.14 E-value=1.1 Score=39.75 Aligned_cols=18 Identities=11% Similarity=0.049 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHHhhhhhc
Q 028496 190 LVLSMLLGEILLWLHWLV 207 (208)
Q Consensus 190 PkPe~l~~~l~~~~~~~~ 207 (208)
+.|+-+..+|+.+.+|+-
T Consensus 364 ~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 364 RDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred CCHHHHHHHHHHHHHhhh
Confidence 889889999999888863
No 174
>PLN02151 trehalose-phosphatase
Probab=77.94 E-value=1.7 Score=38.18 Aligned_cols=18 Identities=6% Similarity=0.049 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHHhhhhhc
Q 028496 190 LVLSMLLGEILLWLHWLV 207 (208)
Q Consensus 190 PkPe~l~~~l~~~~~~~~ 207 (208)
+.|+-+..+++.+.+|+-
T Consensus 332 ~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 332 QEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred CCHHHHHHHHHHHHHhhh
Confidence 888888888988888863
No 175
>PLN03017 trehalose-phosphatase
Probab=77.46 E-value=1.2 Score=39.32 Aligned_cols=18 Identities=11% Similarity=0.108 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHHhhhhhc
Q 028496 190 LVLSMLLGEILLWLHWLV 207 (208)
Q Consensus 190 PkPe~l~~~l~~~~~~~~ 207 (208)
+.|+-+..+|+++..|+-
T Consensus 346 ~dp~eV~~fL~~L~~~~~ 363 (366)
T PLN03017 346 QDPSEVMDFLARLVEWKQ 363 (366)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 889989999999888863
No 176
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=76.80 E-value=1.3 Score=34.71 Aligned_cols=16 Identities=19% Similarity=0.187 Sum_probs=13.4
Q ss_pred CceeeeecCccccCCc
Q 028496 2 ADLYALDFDGVLCDSC 17 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~ 17 (208)
.|+++||+|+||+--.
T Consensus 41 ik~li~DkDNTL~~~~ 56 (168)
T PF09419_consen 41 IKALIFDKDNTLTPPY 56 (168)
T ss_pred ceEEEEcCCCCCCCCC
Confidence 4799999999998554
No 177
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=75.06 E-value=1.8 Score=33.57 Aligned_cols=16 Identities=25% Similarity=0.069 Sum_probs=13.8
Q ss_pred CceeeeecCccccCCc
Q 028496 2 ADLYALDFDGVLCDSC 17 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~ 17 (208)
.++|++|+||||.+..
T Consensus 25 v~~vv~D~Dgtl~~~~ 40 (170)
T TIGR01668 25 IKGVVLDKDNTLVYPD 40 (170)
T ss_pred CCEEEEecCCccccCC
Confidence 3789999999999765
No 178
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=74.66 E-value=4.5 Score=38.98 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=43.1
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC--CCHHHHHHHH
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--LVLSMLLGEI 199 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~--PkPe~l~~~l 199 (208)
+++||+.+++ ++.|++++++|+.....++.+.+.+ |+..++ +.. .|++.+.++.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l-gi~~~~------~~~p~~K~~~v~~l~ 626 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL-GIDFRA------GLLPEDKVKAVTELN 626 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCeec------CCCHHHHHHHHHHHh
Confidence 7899999998 6789999999999999999999995 996322 122 4777766654
No 179
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=74.61 E-value=1.5 Score=38.72 Aligned_cols=15 Identities=33% Similarity=0.696 Sum_probs=13.9
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
|.+.||+||||+|+.
T Consensus 76 K~i~FD~dgtlI~t~ 90 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTK 90 (422)
T ss_pred ceEEEecCCceeecC
Confidence 578999999999999
No 180
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=73.06 E-value=2.1 Score=33.06 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=13.8
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
+.+++|+|+||+-|.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 579999999999998
No 181
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=72.53 E-value=1.7 Score=35.41 Aligned_cols=13 Identities=38% Similarity=0.639 Sum_probs=7.8
Q ss_pred eeecCccccCCcc
Q 028496 6 ALDFDGVLCDSCG 18 (208)
Q Consensus 6 iFD~DGTLvDs~~ 18 (208)
+||+||||..-..
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6899999998773
No 182
>PRK06769 hypothetical protein; Validated
Probab=72.31 E-value=2.1 Score=33.34 Aligned_cols=14 Identities=21% Similarity=0.297 Sum_probs=12.0
Q ss_pred CceeeeecCccccC
Q 028496 2 ADLYALDFDGVLCD 15 (208)
Q Consensus 2 ~~~viFD~DGTLvD 15 (208)
+++++||.||||.=
T Consensus 4 ~~~~~~d~d~~~~~ 17 (173)
T PRK06769 4 IQAIFIDRDGTIGG 17 (173)
T ss_pred CcEEEEeCCCcccC
Confidence 48999999999953
No 183
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=71.90 E-value=3.4 Score=34.17 Aligned_cols=15 Identities=47% Similarity=0.596 Sum_probs=12.6
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
.+++.||||||++..
T Consensus 3 ~ll~sDlD~Tl~~~~ 17 (247)
T PF05116_consen 3 RLLASDLDGTLIDGD 17 (247)
T ss_dssp EEEEEETBTTTBHCH
T ss_pred EEEEEECCCCCcCCC
Confidence 578999999999555
No 184
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=69.21 E-value=2.3 Score=36.33 Aligned_cols=15 Identities=40% Similarity=0.549 Sum_probs=13.6
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
+.+|||.||+||-..
T Consensus 23 DtfifDcDGVlW~g~ 37 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLGE 37 (306)
T ss_pred CEEEEcCCcceeecC
Confidence 689999999999866
No 185
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=68.09 E-value=8.3 Score=30.68 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=31.8
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
+-|...++| ++.|++++++|+.+...+...++.+ ++..+
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l-~~~~~ 60 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLI-GTSGP 60 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHh-CCCCc
Confidence 446666777 5789999999999999999999995 87644
No 186
>PLN02382 probable sucrose-phosphatase
Probab=67.80 E-value=2.8 Score=37.54 Aligned_cols=14 Identities=21% Similarity=0.385 Sum_probs=11.0
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
+|+-||||||+|+.
T Consensus 11 lI~sDLDGTLL~~~ 24 (413)
T PLN02382 11 MIVSDLDHTMVDHH 24 (413)
T ss_pred EEEEcCCCcCcCCC
Confidence 35559999999873
No 187
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=67.43 E-value=7.9 Score=30.93 Aligned_cols=40 Identities=18% Similarity=0.163 Sum_probs=31.8
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCC
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP 180 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F 180 (208)
+-|...++| ++.|++++|+|+.+...+...++.+ |+..++
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~~~ 63 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI-GTSGPV 63 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCCCcE
Confidence 335566666 5689999999999999999999995 987543
No 188
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=67.41 E-value=3 Score=34.29 Aligned_cols=15 Identities=40% Similarity=0.448 Sum_probs=12.1
Q ss_pred CCceeeeecCccccC
Q 028496 1 MADLYALDFDGVLCD 15 (208)
Q Consensus 1 m~~~viFD~DGTLvD 15 (208)
|..+|+-|+||||++
T Consensus 6 ~~~lIFtDlD~TLl~ 20 (274)
T COG3769 6 MPLLIFTDLDGTLLP 20 (274)
T ss_pred cceEEEEcccCcccC
Confidence 445666699999999
No 189
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=67.35 E-value=3 Score=32.71 Aligned_cols=14 Identities=29% Similarity=0.299 Sum_probs=12.2
Q ss_pred CceeeeecCccccC
Q 028496 2 ADLYALDFDGVLCD 15 (208)
Q Consensus 2 ~~~viFD~DGTLvD 15 (208)
.++|++|+|.||+-
T Consensus 28 ikgvi~DlDNTLv~ 41 (175)
T COG2179 28 IKGVILDLDNTLVP 41 (175)
T ss_pred CcEEEEeccCceec
Confidence 37899999999984
No 190
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=65.68 E-value=37 Score=28.23 Aligned_cols=30 Identities=17% Similarity=0.336 Sum_probs=20.9
Q ss_pred CCHHHHH---HhCCCcEEEEcCCcHHHHHHHHH
Q 028496 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLR 171 (208)
Q Consensus 142 pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~ 171 (208)
+++.+++ +.+|+++..+|..+.......++
T Consensus 84 ~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~ 116 (252)
T PF11019_consen 84 SDVPNIINSLQNKGIPVIALTARGPNMEDWTLR 116 (252)
T ss_pred hhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHH
Confidence 4555555 68899999999988765544443
No 191
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=65.28 E-value=42 Score=28.99 Aligned_cols=53 Identities=17% Similarity=0.268 Sum_probs=32.7
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEE-eCCCCCCHHHHHHH
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY-GLGTGLVLSMLLGE 198 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv-~~d~~PkPe~l~~~ 198 (208)
.++|.+.+++ ++.|+.++|.||+.... .++. . ....+.+. +-+. +.|+.+.++
T Consensus 142 lL~p~l~eli~~~k~~Gi~~~L~TNG~~~e---~l~~-L--~~~~d~i~VSLda-~~~e~~~~i 198 (322)
T PRK13762 142 TLYPYLPELIEEFHKRGFTTFLVTNGTRPD---VLEK-L--EEEPTQLYVSLDA-PDEETYKKI 198 (322)
T ss_pred cchhhHHHHHHHHHHcCCCEEEECCCCCHH---HHHH-H--HhcCCEEEEEccC-CCHHHHHHH
Confidence 4578888888 57899999999997643 3444 2 12235443 3333 555555544
No 192
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=65.21 E-value=14 Score=29.16 Aligned_cols=14 Identities=29% Similarity=0.525 Sum_probs=12.2
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
-+..|.||||.|..
T Consensus 8 ~~ciDIDGtit~~~ 21 (194)
T COG5663 8 RCCIDIDGTITDDP 21 (194)
T ss_pred heeeccCCceecCc
Confidence 46789999999987
No 193
>PLN02645 phosphoglycolate phosphatase
Probab=65.09 E-value=0.96 Score=38.73 Aligned_cols=50 Identities=14% Similarity=-0.009 Sum_probs=36.2
Q ss_pred CCcEEEEcCCcHHH-HHHHHHhhCCCCCCCCeEEeCCCC-------CCHHHHHHHHHHh
Q 028496 152 SSRIYIVTTKQSRF-ADALLRELAGVTIPPDRIYGLGTG-------LVLSMLLGEILLW 202 (208)
Q Consensus 152 g~~l~IvTn~~~~~-~~~~L~~~~gl~~~F~~iv~~d~~-------PkPe~l~~~l~~~ 202 (208)
+-.++|+||++... ....+.. .|+..+|+.+.+++.. |+|+++..+++++
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~ 243 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQEW-AGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKF 243 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCCc-cchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHc
Confidence 45799999999754 3344456 4888888888776442 7888999998875
No 194
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=64.37 E-value=10 Score=31.03 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=31.1
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
+-+...++| +++|++++|+|+.+...+...++.+ ++..+
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~-~~~~~ 58 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL-GLDTP 58 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCCCC
Confidence 335566666 5789999999999999999999994 88643
No 195
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=64.30 E-value=3.9 Score=31.43 Aligned_cols=16 Identities=25% Similarity=0.248 Sum_probs=14.0
Q ss_pred ceeeeecCccccCCcc
Q 028496 3 DLYALDFDGVLCDSCG 18 (208)
Q Consensus 3 ~~viFD~DGTLvDs~~ 18 (208)
..+++|+|.||+.|..
T Consensus 7 l~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTK 22 (156)
T ss_pred eEEEEeCCCCcccccc
Confidence 4689999999999993
No 196
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=64.15 E-value=20 Score=28.69 Aligned_cols=44 Identities=16% Similarity=0.113 Sum_probs=28.8
Q ss_pred HhCCCcEEEEcCCcHHH----HHHHHHhhCCCCCCCCeEEeCCCCCCHHH
Q 028496 149 KFASSRIYIVTTKQSRF----ADALLRELAGVTIPPDRIYGLGTGLVLSM 194 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~----~~~~L~~~~gl~~~F~~iv~~d~~PkPe~ 194 (208)
.++|-.+..+|+.++.. ...+-+. +.|...-..++.+|. |+|.-
T Consensus 127 q~RGD~i~FvTGRt~gk~d~vsk~Lak~-F~i~~m~pv~f~Gdk-~k~~q 174 (237)
T COG3700 127 QRRGDAIYFVTGRTPGKTDTVSKTLAKN-FHITNMNPVIFAGDK-PKPGQ 174 (237)
T ss_pred HhcCCeEEEEecCCCCcccccchhHHhh-cccCCCcceeeccCC-CCccc
Confidence 46788888898876543 2333445 488777777887765 55543
No 197
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=63.73 E-value=11 Score=32.38 Aligned_cols=40 Identities=28% Similarity=0.497 Sum_probs=30.3
Q ss_pred CCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHH---HhhCCCC
Q 028496 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALL---RELAGVT 177 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L---~~~~gl~ 177 (208)
...+.||+.+++ ++.|..+.++||++...-+..+ +++ |+.
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~l-G~~ 81 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKL-GFN 81 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHh-Ccc
Confidence 458899999998 6889999999998766555444 453 554
No 198
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=63.25 E-value=10 Score=29.48 Aligned_cols=57 Identities=14% Similarity=0.136 Sum_probs=39.3
Q ss_pred CCCCCHH-HHHHhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHHH
Q 028496 139 RFYPGIP-DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEILL 201 (208)
Q Consensus 139 ~~~pgv~-e~L~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~~ 201 (208)
..-+|.- .+|.+.|++++|+|+..+..++...+.+ |+..+|.. .+ .|-..+.+++++
T Consensus 37 nv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L-GI~~~~qG---~~--dK~~a~~~L~~~ 94 (170)
T COG1778 37 NVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAKDL-GIKHLYQG---IS--DKLAAFEELLKK 94 (170)
T ss_pred eccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHHHc-CCceeeec---hH--hHHHHHHHHHHH
Confidence 3445533 3446889999999999999999999995 98755432 11 345555555554
No 199
>PTZ00445 p36-lilke protein; Provisional
Probab=62.88 E-value=18 Score=29.55 Aligned_cols=61 Identities=13% Similarity=0.081 Sum_probs=41.8
Q ss_pred CCCHHHHH---HhCCCcEEEEcCCcHH---------------HHHHHHHhhCCCCCCCCeEEeCCCC-------------
Q 028496 141 YPGIPDAL---KFASSRIYIVTTKQSR---------------FADALLRELAGVTIPPDRIYGLGTG------------- 189 (208)
Q Consensus 141 ~pgv~e~L---~~~g~~l~IvTn~~~~---------------~~~~~L~~~~gl~~~F~~iv~~d~~------------- 189 (208)
-|....++ ++.|++++|||=++.. .++..|++ .+.+.-...+++.-..
T Consensus 77 tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~gl 155 (219)
T PTZ00445 77 TPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLGL 155 (219)
T ss_pred CHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhcc
Confidence 44455555 5789999999988763 57888887 5766656666654221
Q ss_pred --CCHHH--H--HHHHHHh
Q 028496 190 --LVLSM--L--LGEILLW 202 (208)
Q Consensus 190 --PkPe~--l--~~~l~~~ 202 (208)
|.|++ + .++++++
T Consensus 156 ~KPdp~iK~yHle~ll~~~ 174 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDF 174 (219)
T ss_pred cCCCccchHHHHHHHHHHc
Confidence 77777 7 7777764
No 200
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=62.05 E-value=3.9 Score=36.86 Aligned_cols=15 Identities=27% Similarity=0.423 Sum_probs=14.0
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
+.|++|+||||.-|-
T Consensus 376 kiVVsDiDGTITkSD 390 (580)
T COG5083 376 KIVVSDIDGTITKSD 390 (580)
T ss_pred cEEEEecCCcEEehh
Confidence 689999999999988
No 201
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=61.74 E-value=13 Score=30.82 Aligned_cols=39 Identities=10% Similarity=0.028 Sum_probs=31.9
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
+-+...++| +++|++++++|+.+...+...++.+ |+..+
T Consensus 20 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~~ 61 (272)
T PRK15126 20 LGEKTLSTLARLRERDITLTFATGRHVLEMQHILGAL-SLDAY 61 (272)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCCc
Confidence 445556666 5789999999999999999999995 98754
No 202
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=61.46 E-value=16 Score=30.00 Aligned_cols=40 Identities=23% Similarity=0.354 Sum_probs=32.3
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
.+-|...++| +++|++++|+|+.+...+...++.+ ++..+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~~ 62 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL-ALDTP 62 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc-CCCCC
Confidence 3455566777 5789999999999999999999995 88654
No 203
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=60.46 E-value=4.4 Score=40.08 Aligned_cols=15 Identities=27% Similarity=0.519 Sum_probs=12.5
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
.+++||+||||+.-.
T Consensus 592 RLlfLDyDGTLap~~ 606 (934)
T PLN03064 592 RLLILGFNATLTEPV 606 (934)
T ss_pred eEEEEecCceeccCC
Confidence 478899999999754
No 204
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=59.83 E-value=4.5 Score=39.37 Aligned_cols=15 Identities=33% Similarity=0.494 Sum_probs=12.6
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
.+++||+||||+.-.
T Consensus 508 rll~LDyDGTL~~~~ 522 (797)
T PLN03063 508 RLLILGFYGTLTEPR 522 (797)
T ss_pred eEEEEecCccccCCC
Confidence 478999999999654
No 205
>PRK10976 putative hydrolase; Provisional
Probab=59.69 E-value=11 Score=30.89 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=30.8
Q ss_pred CCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 141 YPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 141 ~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
-|...++| +++|++++|+|+.+...+...++.+ |+..+
T Consensus 21 s~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~~ 61 (266)
T PRK10976 21 SPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNL-EIKSY 61 (266)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc-CCCCe
Confidence 34456666 5789999999999999999999995 88754
No 206
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=59.31 E-value=18 Score=28.63 Aligned_cols=38 Identities=26% Similarity=0.342 Sum_probs=31.4
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
+-|...++| +++|++++++|+++...+...+..+ ++..
T Consensus 16 i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~ 56 (254)
T PF08282_consen 16 ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL-GIDD 56 (254)
T ss_dssp SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT-THCS
T ss_pred eCHHHHHHHHhhcccceEEEEEccCcccccccccccc-cchh
Confidence 445666666 5789999999999999999999995 8763
No 207
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=58.35 E-value=17 Score=28.82 Aligned_cols=38 Identities=21% Similarity=0.278 Sum_probs=30.0
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
+-|...++| ++.|++++++|+.+...+...++.+ |+..
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l-~~~~ 56 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI-GTPD 56 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCCC
Confidence 345556666 4689999999999999999999985 8543
No 208
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=58.30 E-value=13 Score=30.54 Aligned_cols=39 Identities=23% Similarity=0.336 Sum_probs=32.5
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
.-+.+.++| +++|++++|+|+++...+...++.+ ++..+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l-~~~~~ 62 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEEL-GLDGP 62 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCCcc
Confidence 445566666 5889999999999999999999995 98863
No 209
>PTZ00445 p36-lilke protein; Provisional
Probab=57.79 E-value=4 Score=33.27 Aligned_cols=14 Identities=29% Similarity=0.354 Sum_probs=12.9
Q ss_pred CceeeeecCccccC
Q 028496 2 ADLYALDFDGVLCD 15 (208)
Q Consensus 2 ~~~viFD~DGTLvD 15 (208)
+|+|++|||-||++
T Consensus 43 Ik~Va~D~DnTlI~ 56 (219)
T PTZ00445 43 IKVIASDFDLTMIT 56 (219)
T ss_pred CeEEEecchhhhhh
Confidence 47999999999999
No 210
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=57.59 E-value=26 Score=29.02 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=29.6
Q ss_pred CCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 142 pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
+...++| +++|++++++|+++...+...++.+ |+.
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l-~~~ 64 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL-GLQ 64 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh-CCC
Confidence 4455666 5789999999999999999999995 985
No 211
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=56.50 E-value=29 Score=24.68 Aligned_cols=39 Identities=10% Similarity=-0.019 Sum_probs=29.5
Q ss_pred HHHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHHHHhhhhh
Q 028496 164 RFADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEILLWLHWL 206 (208)
Q Consensus 164 ~~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l~~~~~~~ 206 (208)
..++.+++.+ .....|.-+|++ .+|++|..+.+++|++.
T Consensus 53 ~~i~~i~~~f----P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i 92 (100)
T PF09949_consen 53 DNIERILRDF----PERKFILIGDSGQHDPEIYAEIARRFPGRI 92 (100)
T ss_pred HHHHHHHHHC----CCCcEEEEeeCCCcCHHHHHHHHHHCCCCE
Confidence 3445555442 456788888888 88999999999999874
No 212
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=54.87 E-value=24 Score=28.48 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=29.6
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
+++|++++++|+++...+...+..+ ++. ..+.+++.
T Consensus 27 ~~~gi~~viaTGR~~~~v~~~~~~l-~l~-~~~~~I~~ 62 (236)
T TIGR02471 27 SGDAVGFGIATGRSVESAKSRYAKL-NLP-SPDVLIAR 62 (236)
T ss_pred cCCCceEEEEeCCCHHHHHHHHHhC-CCC-CCCEEEEC
Confidence 5779999999999999999999995 886 34555554
No 213
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=51.92 E-value=7.2 Score=34.10 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=13.4
Q ss_pred CceeeeecCccccCCc
Q 028496 2 ADLYALDFDGVLCDSC 17 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~ 17 (208)
+++|-||||.||+-=-
T Consensus 12 i~~~GFDmDyTLa~Y~ 27 (343)
T TIGR02244 12 IQVFGFDMDYTLAQYK 27 (343)
T ss_pred CCEEEECccccccccC
Confidence 4789999999998654
No 214
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=51.90 E-value=23 Score=35.04 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=35.2
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
+|.||+.+++ ++.|+++.++|+.....+..+.+. .|+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~ 578 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFS 578 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCC
Confidence 6799999999 689999999999999999999999 49964
No 215
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=51.87 E-value=16 Score=34.90 Aligned_cols=40 Identities=20% Similarity=0.174 Sum_probs=35.1
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
++-||+.+.+ ++.|+++.++|+.....+..+-+.+ |+.++
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l-GI~~v 488 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA-GVDDF 488 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCEE
Confidence 5678999998 6889999999999999999999994 98653
No 216
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=51.48 E-value=29 Score=27.78 Aligned_cols=38 Identities=21% Similarity=0.350 Sum_probs=32.6
Q ss_pred CCCCCHHHHH--HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 139 RFYPGIPDAL--KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 139 ~~~pgv~e~L--~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
..-|++.++| -...+.++|-|+++...+..++..+ |+.
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l-~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL-GVL 84 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh-ccc
Confidence 3469999999 3568999999999999999999995 764
No 217
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=51.35 E-value=7.9 Score=26.08 Aligned_cols=14 Identities=29% Similarity=0.427 Sum_probs=12.4
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
.+.++=|||.||++
T Consensus 40 ~l~L~eDGT~VddE 53 (74)
T smart00266 40 TLVLEEDGTIVDDE 53 (74)
T ss_pred EEEEecCCcEEccH
Confidence 46789999999999
No 218
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=51.08 E-value=8.1 Score=26.48 Aligned_cols=14 Identities=36% Similarity=0.373 Sum_probs=12.5
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
.+..+-|||.|||+
T Consensus 41 ~lvLeeDGT~Vd~E 54 (81)
T cd06537 41 TLVLEEDGTAVDSE 54 (81)
T ss_pred EEEEecCCCEEccH
Confidence 47789999999999
No 219
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=51.07 E-value=16 Score=30.63 Aligned_cols=13 Identities=38% Similarity=0.335 Sum_probs=12.5
Q ss_pred eeeecCccccCCc
Q 028496 5 YALDFDGVLCDSC 17 (208)
Q Consensus 5 viFD~DGTLvDs~ 17 (208)
|.||.||||.+.+
T Consensus 124 IAFDgDaVLfsDe 136 (264)
T PF06189_consen 124 IAFDGDAVLFSDE 136 (264)
T ss_pred EEEcCCeEeecCc
Confidence 7899999999999
No 220
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=50.09 E-value=7 Score=31.70 Aligned_cols=14 Identities=36% Similarity=0.510 Sum_probs=12.6
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
+++||.||||.-+.
T Consensus 13 l~lfdvdgtLt~~r 26 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPR 26 (252)
T ss_pred EEEEecCCcccccc
Confidence 68999999998776
No 221
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=50.09 E-value=21 Score=34.17 Aligned_cols=39 Identities=26% Similarity=0.322 Sum_probs=34.8
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
++-||+.+.+ ++.|+++.++|+-....+..+-+. .|+++
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~ 486 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD 486 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE
Confidence 5679999998 688999999999999999999999 59964
No 222
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=50.00 E-value=32 Score=28.02 Aligned_cols=35 Identities=14% Similarity=0.076 Sum_probs=27.9
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEe
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG 185 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~ 185 (208)
+++|++++++|+++...++.+++.+ ++.. .+.+++
T Consensus 34 ~~~gi~fv~aTGR~~~~~~~~~~~~-~~~~-p~~~I~ 68 (249)
T TIGR01485 34 RGEDSLLVYSTGRSPHSYKELQKQK-PLLT-PDIWVT 68 (249)
T ss_pred hccCceEEEEcCCCHHHHHHHHhcC-CCCC-CCEEEE
Confidence 4678899999999999999999884 8754 455555
No 223
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=49.79 E-value=8.8 Score=26.12 Aligned_cols=14 Identities=29% Similarity=0.427 Sum_probs=12.4
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
.+..+-|||.|||+
T Consensus 42 ~lvL~eDGT~Vd~E 55 (78)
T cd06539 42 TLVLEEDGTVVDTE 55 (78)
T ss_pred EEEEeCCCCEEccH
Confidence 46789999999999
No 224
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=48.77 E-value=23 Score=33.91 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=35.5
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
++-||+.+.+ ++.|+++.++|+-....+..+-+. .|+.++
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v 483 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRF 483 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceE
Confidence 6789999998 688999999999999999999999 499753
No 225
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=47.80 E-value=9.9 Score=30.17 Aligned_cols=16 Identities=31% Similarity=0.320 Sum_probs=14.3
Q ss_pred ceeeeecCccccCCcc
Q 028496 3 DLYALDFDGVLCDSCG 18 (208)
Q Consensus 3 ~~viFD~DGTLvDs~~ 18 (208)
+++++|-||||...-+
T Consensus 6 k~lflDRDGtin~d~~ 21 (181)
T COG0241 6 KALFLDRDGTINIDKG 21 (181)
T ss_pred cEEEEcCCCceecCCC
Confidence 6999999999998883
No 226
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=47.09 E-value=35 Score=28.62 Aligned_cols=52 Identities=13% Similarity=-0.158 Sum_probs=39.9
Q ss_pred CCcEEEEcCCcHHHHHHHHHhhCCCCCCCC--eEEeCCCCCCHHHHHHHHHHhhh
Q 028496 152 SSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTGLVLSMLLGEILLWLH 204 (208)
Q Consensus 152 g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~--~iv~~d~~PkPe~l~~~l~~~~~ 204 (208)
+.--++||+++-.....++--+ ||..+|. .|+++-.+.|...+..+.+++-+
T Consensus 175 ~~vNvLVTs~qLVPaLaKcLLy-~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~ 228 (274)
T TIGR01658 175 NCINVLVTSGQLIPSLAKCLLF-RLDTIFRIENVYSSIKVGKLQCFKWIKERFGH 228 (274)
T ss_pred ceeEEEEEcCccHHHHHHHHHh-ccCCccccccccchhhcchHHHHHHHHHHhCC
Confidence 3345778888776666666664 9999995 59998777999999999988754
No 227
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=46.66 E-value=15 Score=31.45 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=32.0
Q ss_pred CCCCCCCHHHHH---HhC----CCcEEEEcCCc---HHH-HHHHHHhhCCCCCCCCeEEe
Q 028496 137 ANRFYPGIPDAL---KFA----SSRIYIVTTKQ---SRF-ADALLRELAGVTIPPDRIYG 185 (208)
Q Consensus 137 ~~~~~pgv~e~L---~~~----g~~l~IvTn~~---~~~-~~~~L~~~~gl~~~F~~iv~ 185 (208)
...++||+.+++ +.. |++..++||++ ... +..+.+++ |+.--.+.|++
T Consensus 14 g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l-G~~~~~~~i~~ 72 (321)
T TIGR01456 14 GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL-GVDVSPLQVIQ 72 (321)
T ss_pred CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc-CCCCCHHHHHh
Confidence 346699999888 455 99999999986 444 44444774 87533333333
No 228
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=46.47 E-value=7.6 Score=26.10 Aligned_cols=10 Identities=50% Similarity=0.823 Sum_probs=8.8
Q ss_pred eeeecCcccc
Q 028496 5 YALDFDGVLC 14 (208)
Q Consensus 5 viFD~DGTLv 14 (208)
+=|||+|.|+
T Consensus 3 ~RFdf~G~l~ 12 (73)
T PF08620_consen 3 LRFDFDGNLL 12 (73)
T ss_pred ccccCCCCEe
Confidence 4499999999
No 229
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=46.36 E-value=10 Score=25.76 Aligned_cols=14 Identities=29% Similarity=0.294 Sum_probs=12.5
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
.+..+-|||.||++
T Consensus 42 ~lvL~eDGTeVddE 55 (78)
T cd01615 42 TLVLEEDGTEVDDE 55 (78)
T ss_pred EEEEeCCCcEEccH
Confidence 37889999999999
No 230
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=45.66 E-value=76 Score=24.80 Aligned_cols=57 Identities=19% Similarity=0.201 Sum_probs=34.6
Q ss_pred CCCCCHHHHH---HhCCC--cEEEEcCCc-------HHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHHHh
Q 028496 139 RFYPGIPDAL---KFASS--RIYIVTTKQ-------SRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEILLW 202 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~--~l~IvTn~~-------~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~~~ 202 (208)
.+.|.+.+.+ ++.+. +++|+||+. ...++.+-+.+ |+ +.+.-. ..||..+.++++.+
T Consensus 59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l-gI----pvl~h~--~kKP~~~~~i~~~~ 127 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL-GI----PVLRHR--AKKPGCFREILKYF 127 (168)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh-CC----cEEEeC--CCCCccHHHHHHHH
Confidence 4556666666 44444 599999983 66777777774 74 332222 15666666666654
No 231
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=45.23 E-value=13 Score=31.27 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=13.6
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
++++||+||||.+..
T Consensus 159 ~~~~~D~dgtl~~~~ 173 (300)
T PHA02530 159 KAVIFDIDGTLAKMG 173 (300)
T ss_pred CEEEEECCCcCcCCC
Confidence 579999999999977
No 232
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=44.96 E-value=75 Score=23.51 Aligned_cols=46 Identities=24% Similarity=0.198 Sum_probs=32.7
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcHH---------------HHHHHHHhhCCCCCCCCeEEeC
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQSR---------------FADALLRELAGVTIPPDRIYGL 186 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~~---------------~~~~~L~~~~gl~~~F~~iv~~ 186 (208)
..+.+++.+.| ++.|+.+.++|+.+.. .+...|+++ ++ .+|.++-.
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~-~i--pYd~l~~~ 86 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQH-NV--PYDEIYVG 86 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHc-CC--CCceEEeC
Confidence 35677888888 4789999999998765 445677775 76 34555433
No 233
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=44.47 E-value=31 Score=33.25 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=43.7
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCCCCHHHHHHHHHH
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGLVLSMLLGEILL 201 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~PkPe~l~~~l~~ 201 (208)
++-|++.+++ ++.|+++.++|+-.+..++.+-+.+ |+++++..+.=. .|-+.+.++-++
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l-GId~v~AellPe---dK~~~V~~l~~~ 598 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL-GIDEVRAELLPE---DKAEIVRELQAE 598 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-ChHhheccCCcH---HHHHHHHHHHhc
Confidence 5678999998 7899999999999999999999995 996554222111 455566655543
No 234
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=44.25 E-value=12 Score=25.69 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=12.3
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
.|.++=|||.||++
T Consensus 44 ~lvL~eDGT~VddE 57 (80)
T cd06536 44 TLVLAEDGTIVEDE 57 (80)
T ss_pred EEEEecCCcEEccH
Confidence 36689999999999
No 235
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=43.58 E-value=12 Score=24.32 Aligned_cols=15 Identities=27% Similarity=0.100 Sum_probs=13.7
Q ss_pred ceeeeecCccccCCc
Q 028496 3 DLYALDFDGVLCDSC 17 (208)
Q Consensus 3 ~~viFD~DGTLvDs~ 17 (208)
.-+|||-|+.-+||+
T Consensus 25 s~iiFDNded~tdSa 39 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSA 39 (65)
T ss_pred CCeeecCCCcccchH
Confidence 458999999999999
No 236
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=43.44 E-value=62 Score=28.28 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=24.9
Q ss_pred cCCCCCCCHHHHH---HhCC-CcEEEEcCCcHHHHHHHHHh
Q 028496 136 GANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRE 172 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g-~~l~IvTn~~~~~~~~~L~~ 172 (208)
....++|||.... .+.| .++.-+||++-..- ..|..
T Consensus 193 ~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f-~~L~e 232 (373)
T COG4850 193 LTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLF-PTLQE 232 (373)
T ss_pred cccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhH-HHHHH
Confidence 3458999999887 2334 89999999986533 33433
No 237
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=42.74 E-value=47 Score=25.22 Aligned_cols=60 Identities=10% Similarity=0.216 Sum_probs=43.4
Q ss_pred cCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHH
Q 028496 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEI 199 (208)
Q Consensus 136 ~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l 199 (208)
....+|+.+.+++ ++. +.+.|+|+....++....+- .|+. .+.++...+. -|.++++++-
T Consensus 27 tgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~a~~e~K~~ii~eLk 90 (152)
T COG4087 27 TGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEF-VGIP--VERVFAGADPEMKAKIIRELK 90 (152)
T ss_pred cCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHH-cCCc--eeeeecccCHHHHHHHHHHhc
Confidence 4568999999998 455 99999999999999999988 5864 3445544333 5555555544
No 238
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=42.12 E-value=53 Score=24.68 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=31.0
Q ss_pred CCCCCCHHHHH---HhCCCcEEEEcCCcH-HHHHHHHHhhCCCCCCC
Q 028496 138 NRFYPGIPDAL---KFASSRIYIVTTKQS-RFADALLRELAGVTIPP 180 (208)
Q Consensus 138 ~~~~pgv~e~L---~~~g~~l~IvTn~~~-~~~~~~L~~~~gl~~~F 180 (208)
...|+++...| +..|+.++++|++.. +.+...|+.+ .+..-+
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f-kvk~~G 88 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF-KVKQTG 88 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh-ccCccc
Confidence 34577777766 899999999999765 4777888884 765433
No 239
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=40.78 E-value=38 Score=26.45 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=27.6
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHh
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE 172 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~ 172 (208)
.+-|.+.+.| ++.|.+++|+|+++...+..+++.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~ 53 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQ 53 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHh
Confidence 3446677777 477899999999999999998876
No 240
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=39.90 E-value=17 Score=24.69 Aligned_cols=13 Identities=31% Similarity=0.350 Sum_probs=11.6
Q ss_pred eeeecCccccCCc
Q 028496 5 YALDFDGVLCDSC 17 (208)
Q Consensus 5 viFD~DGTLvDs~ 17 (208)
+..+=|||.||++
T Consensus 43 lvL~eDGT~VddE 55 (78)
T PF02017_consen 43 LVLEEDGTEVDDE 55 (78)
T ss_dssp EEETTTTCBESSC
T ss_pred EEEeCCCcEEccH
Confidence 5678899999999
No 241
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=39.62 E-value=63 Score=32.07 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=34.3
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
+|-|++.+++ ++.|+++.++|+-....+..+-+.+ |+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l-GI~ 590 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV-GLE 590 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCC
Confidence 6778899998 6889999999999999999999995 995
No 242
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=39.14 E-value=62 Score=32.13 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=34.0
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
+|-|++.+++ ++.|+++.++|+-....+..+-+.+ |+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~ 590 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV-GLD 590 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCC
Confidence 5678888888 6889999999999999999999995 995
No 243
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=38.78 E-value=1.4e+02 Score=24.86 Aligned_cols=61 Identities=11% Similarity=0.192 Sum_probs=38.8
Q ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHhhhccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCC
Q 028496 101 KPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGV 176 (208)
Q Consensus 101 ~~~~~~~~g~~~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl 176 (208)
...++.+.+++.+++.+..+ .....+-+|+.+++ ++.++|+.|.|.+-.+.++..|+. .|.
T Consensus 66 ah~llv~~~l~k~~i~~~V~--------------~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~ 129 (246)
T PF05822_consen 66 AHELLVEQGLTKSEIEEAVK--------------ESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGV 129 (246)
T ss_dssp HHHHHHHHT-BGGGHHHHHH--------------CS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT-
T ss_pred HHHHHHhcCcCHHHHHHHHH--------------hcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCC
Confidence 44566666666554322211 23567889999998 688999999999999999999999 464
No 244
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=38.47 E-value=46 Score=29.46 Aligned_cols=38 Identities=18% Similarity=0.160 Sum_probs=29.1
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhC--CCCCCCCeEEeC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELA--GVTIPPDRIYGL 186 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~--gl~~~F~~iv~~ 186 (208)
++.|.++.++||++...+..-++.+. ++.++||.|+.-
T Consensus 253 ~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvq 292 (510)
T KOG2470|consen 253 KDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQ 292 (510)
T ss_pred HHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEe
Confidence 57899999999999998877666532 345789986654
No 245
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=38.10 E-value=16 Score=24.87 Aligned_cols=14 Identities=36% Similarity=0.309 Sum_probs=12.4
Q ss_pred eeeeecCccccCCc
Q 028496 4 LYALDFDGVLCDSC 17 (208)
Q Consensus 4 ~viFD~DGTLvDs~ 17 (208)
.+..+-|||.|||+
T Consensus 41 ~lvL~eDGT~Vd~E 54 (79)
T cd06538 41 SLVLDEDGTGVDTE 54 (79)
T ss_pred EEEEecCCcEEccH
Confidence 37789999999999
No 246
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=37.77 E-value=87 Score=30.93 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=34.3
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
+|-|++.+++ ++.|+++.++|+.....+..+-+.+ |+.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l-GI~ 555 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV-GID 555 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCC
Confidence 5678999998 6889999999999999999999995 996
No 247
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=37.04 E-value=16 Score=31.82 Aligned_cols=15 Identities=40% Similarity=0.589 Sum_probs=13.2
Q ss_pred eeeeecCccccCCcc
Q 028496 4 LYALDFDGVLCDSCG 18 (208)
Q Consensus 4 ~viFD~DGTLvDs~~ 18 (208)
++.||+||+|+-.-+
T Consensus 37 gfafDIDGVL~RG~~ 51 (389)
T KOG1618|consen 37 GFAFDIDGVLFRGHR 51 (389)
T ss_pred eEEEecccEEEecCC
Confidence 689999999999873
No 248
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=36.40 E-value=55 Score=31.73 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=35.0
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
+|-|++.+++ ++.|+++.++|+.....+..+-+.+ |+.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL-GLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCC
Confidence 6778999998 6889999999999999999999995 9964
No 249
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=35.70 E-value=19 Score=33.05 Aligned_cols=13 Identities=31% Similarity=0.457 Sum_probs=0.0
Q ss_pred CceeeeecCcccc
Q 028496 2 ADLYALDFDGVLC 14 (208)
Q Consensus 2 ~~~viFD~DGTLv 14 (208)
.|+++.|+||||+
T Consensus 222 kK~LVLDLDNTLW 234 (574)
T COG3882 222 KKALVLDLDNTLW 234 (574)
T ss_pred cceEEEecCCccc
No 250
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=33.58 E-value=1.2e+02 Score=30.35 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=34.8
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
++-|++.+++ ++.|+++.++|+.....+..+-+. .|+..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~ 620 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILT 620 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCC
Confidence 6778999998 688999999999999999999999 49964
No 251
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=32.19 E-value=21 Score=31.86 Aligned_cols=13 Identities=23% Similarity=0.386 Sum_probs=0.0
Q ss_pred CceeeeecCcccc
Q 028496 2 ADLYALDFDGVLC 14 (208)
Q Consensus 2 ~~~viFD~DGTLv 14 (208)
+.+|-||||+||.
T Consensus 27 i~~~GfdmDyTL~ 39 (424)
T KOG2469|consen 27 IGIVGFDMDYTLA 39 (424)
T ss_pred CcEEeeccccchh
No 252
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=32.07 E-value=1.5e+02 Score=29.44 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=45.2
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHHHH
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEILL 201 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l~~ 201 (208)
.+-||+..++ ++.|++++++|+.....++..-+.. | ++.|++.-.. .|-+.++++.+.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V-G----i~~V~aev~P~~K~~~Ik~lq~~ 784 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV-G----IDNVYAEVLPEQKAEKIKEIQKN 784 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh-C----cceEEeccCchhhHHHHHHHHhc
Confidence 4567777776 8999999999999999999999985 8 6777766443 677777776554
No 253
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=31.58 E-value=23 Score=28.56 Aligned_cols=18 Identities=17% Similarity=0.045 Sum_probs=13.4
Q ss_pred ceeeeecCccccCCcchh
Q 028496 3 DLYALDFDGVLCDSCGES 20 (208)
Q Consensus 3 ~~viFD~DGTLvDs~~~~ 20 (208)
..|-||||||+.---..|
T Consensus 59 ~~v~~D~~GT~m~iPYGY 76 (271)
T PF06901_consen 59 HTVTFDFQGTKMVIPYGY 76 (271)
T ss_pred eeEEEeccceEEEeechh
Confidence 578999999987554333
No 254
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=30.79 E-value=1.4e+02 Score=29.56 Aligned_cols=42 Identities=26% Similarity=0.443 Sum_probs=36.5
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD 181 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~ 181 (208)
+|-|++.+.+ ++.|+++.++|+.....+.++.++. |+...=+
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i-Gi~~~~e 628 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI-GIFSEDE 628 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh-CCCcCCc
Confidence 6788888887 6899999999999999999999995 9865544
No 255
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=30.48 E-value=25 Score=31.89 Aligned_cols=17 Identities=24% Similarity=0.284 Sum_probs=11.2
Q ss_pred CceeeeecCccccCCcc
Q 028496 2 ADLYALDFDGVLCDSCG 18 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~~ 18 (208)
+++|-||||-||+-=-.
T Consensus 12 i~~iGFDmDyTLa~Y~~ 28 (448)
T PF05761_consen 12 IDVIGFDMDYTLARYKS 28 (448)
T ss_dssp --EEEE-TBTTTBEE-C
T ss_pred CCEEEECcccchhhcCH
Confidence 37899999999986553
No 256
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=30.04 E-value=29 Score=29.17 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=14.4
Q ss_pred CceeeeecCccccCCc
Q 028496 2 ADLYALDFDGVLCDSC 17 (208)
Q Consensus 2 ~~~viFD~DGTLvDs~ 17 (208)
.|.++.|+|+||+-|.
T Consensus 89 kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSS 104 (262)
T ss_pred CceEEEeCCCcccccc
Confidence 4789999999999887
No 257
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=29.43 E-value=79 Score=30.44 Aligned_cols=37 Identities=27% Similarity=0.246 Sum_probs=29.5
Q ss_pred CCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 142 pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
+...++| +++|++++++|+++...+...++.+ |+..+
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L-gl~~~ 475 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSAKTMGEQDLYRNEL-GIKDP 475 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CCCCe
Confidence 3445555 5789999999999999999999995 87543
No 258
>PTZ00174 phosphomannomutase; Provisional
Probab=29.23 E-value=1.2e+02 Score=24.65 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=25.2
Q ss_pred CCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHh
Q 028496 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE 172 (208)
Q Consensus 140 ~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~ 172 (208)
.-|...++| +++|+.++|+|+.+...+...++.
T Consensus 23 is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 23 ITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 344556666 578999999999998887776654
No 259
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=28.84 E-value=91 Score=17.14 Aligned_cols=22 Identities=27% Similarity=0.262 Sum_probs=15.9
Q ss_pred CCCcEEEEcCCcHHHHHHHHHh
Q 028496 151 ASSRIYIVTTKQSRFADALLRE 172 (208)
Q Consensus 151 ~g~~l~IvTn~~~~~~~~~L~~ 172 (208)
...+++|-||+........++.
T Consensus 3 g~LqI~ISTnG~sP~la~~iR~ 24 (30)
T PF14824_consen 3 GPLQIAISTNGKSPRLARLIRK 24 (30)
T ss_dssp TTEEEEEEESSS-HHHHHHHHH
T ss_pred CCeEEEEECCCCChHHHHHHHH
Confidence 3578999999988777666654
No 260
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.81 E-value=1.9e+02 Score=24.18 Aligned_cols=39 Identities=13% Similarity=0.307 Sum_probs=31.4
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCcHHHHHHHHHhhCCC
Q 028496 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV 176 (208)
Q Consensus 137 ~~~~~pgv~e~L~--~~g~~l~IvTn~~~~~~~~~L~~~~gl 176 (208)
..++.||+.++++ +.-++-.|+|.+.+++++++.... |+
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~i-g~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMI-GV 121 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhc-CC
Confidence 4688999999994 334577888888889999998884 87
No 261
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=28.55 E-value=76 Score=31.88 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=34.2
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
+|-|++.+++ +++|+++.++|+.....+..+.+.+ |+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCC
Confidence 5678999998 6889999999999999999999994 995
No 262
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=28.21 E-value=1.8e+02 Score=28.93 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=40.2
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCCCC--eEEeCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGT 188 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~F~--~iv~~d~ 188 (208)
+|-|++.+++ +++|+++.++|+-....+..+-+.+ |+..--+ .+++++.
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~-Gi~~~~~~~~vi~G~e 600 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC-GIEAEAESALVIDGAE 600 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc-CCCCCCCceeEeehHH
Confidence 7789999998 6899999999999999999999995 9876543 2555544
No 263
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=28.19 E-value=1.1e+02 Score=29.15 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=41.5
Q ss_pred CCCCCCCHHHHHH--hCCCcEEEEcCCcHHHHHHHHHhhCCCC-CCC-CeEEeCCCC
Q 028496 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLGTG 189 (208)
Q Consensus 137 ~~~~~pgv~e~L~--~~g~~l~IvTn~~~~~~~~~L~~~~gl~-~~F-~~iv~~d~~ 189 (208)
.+++-|++.++|+ ..-+.|.|+|=+++.+++.+++-+ .=. .|| +.|++.+..
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~li-DP~~~lF~dRIisrde~ 254 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLI-DPEGKYFGDRIISRDES 254 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHh-CCCCccccceEEEecCC
Confidence 4678899999993 455999999999999999988875 433 667 668888764
No 264
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=28.08 E-value=1e+02 Score=25.62 Aligned_cols=45 Identities=13% Similarity=0.129 Sum_probs=31.9
Q ss_pred HHhhHhhhccCCCCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHh
Q 028496 127 MDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE 172 (208)
Q Consensus 127 ~~~y~~~~~~~~~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~ 172 (208)
...|....+ ....|+++...+ +..|++++|-|+++......+..+
T Consensus 112 ~~gy~sg~l-k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~ 159 (254)
T KOG2630|consen 112 AAGYESGEL-KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY 159 (254)
T ss_pred Hhhcccccc-cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc
Confidence 334443333 348899999999 578999999999998766555443
No 265
>PF04495 GRASP55_65: GRASP55/65 PDZ-like domain ; InterPro: IPR007583 GRASP55 (Golgi reassembly stacking protein of 55 kDa) and GRASP65 (a 65 kDa) protein are highly homologous. GRASP55 is a component of the Golgi stacking machinery. GRASP65, an N-ethylmaleimide-sensitive membrane protein required for the stacking of Golgi cisternae in a cell-free system [].; PDB: 3RLE_A 4EDJ_A.
Probab=26.36 E-value=56 Score=24.60 Aligned_cols=30 Identities=23% Similarity=0.054 Sum_probs=20.9
Q ss_pred CCCCCCCCeEEeCCCC--CCHHHHHHHHHHhh
Q 028496 174 AGVTIPPDRIYGLGTG--LVLSMLLGEILLWL 203 (208)
Q Consensus 174 ~gl~~~F~~iv~~d~~--PkPe~l~~~l~~~~ 203 (208)
+||..+||+|++.+.. -..+.+..+++.+.
T Consensus 59 AGL~p~~DyIig~~~~~l~~~~~l~~~v~~~~ 90 (138)
T PF04495_consen 59 AGLEPFFDYIIGIDGGLLDDEDDLFELVEANE 90 (138)
T ss_dssp TT--TTTEEEEEETTCE--STCHHHHHHHHTT
T ss_pred CCccccccEEEEccceecCCHHHHHHHHHHcC
Confidence 5999999999999876 55667777777653
No 266
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=26.00 E-value=1e+02 Score=31.24 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=34.9
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
++-|++.+++ ++.|+++.++|+.....+..+-+. .|+..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~ 687 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIP 687 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCC
Confidence 6788999998 689999999999999999999999 49963
No 267
>PF13021 DUF3885: Domain of unknown function (DUF3885)
Probab=25.38 E-value=63 Score=18.77 Aligned_cols=18 Identities=6% Similarity=0.041 Sum_probs=15.6
Q ss_pred CCHHHHHHHHHHhhhhhc
Q 028496 190 LVLSMLLGEILLWLHWLV 207 (208)
Q Consensus 190 PkPe~l~~~l~~~~~~~~ 207 (208)
.+++.++.+-+++-+|++
T Consensus 14 ~~~~~i~~ly~~y~~WIl 31 (38)
T PF13021_consen 14 NNKERIRPLYEKYNDWIL 31 (38)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 778999999999999974
No 268
>PLN02887 hydrolase family protein
Probab=24.55 E-value=1.2e+02 Score=28.67 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=29.5
Q ss_pred CCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCC
Q 028496 141 YPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (208)
Q Consensus 141 ~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~ 177 (208)
-+...++| +++|+.++|+|+.+...+...++.+ ++.
T Consensus 327 s~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L-~l~ 365 (580)
T PLN02887 327 SETNAKALKEALSRGVKVVIATGKARPAVIDILKMV-DLA 365 (580)
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-Ccc
Confidence 34455666 5789999999999999999999995 875
No 269
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=24.14 E-value=5e+02 Score=22.88 Aligned_cols=62 Identities=15% Similarity=0.065 Sum_probs=37.9
Q ss_pred CCCCCHHHHHHhCC-CcEEEEcCCcHH---HHHHHHHhhCCCCCCCCeEEeCCCC-CCHHHHHHHHHHhhh
Q 028496 139 RFYPGIPDALKFAS-SRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGLGTG-LVLSMLLGEILLWLH 204 (208)
Q Consensus 139 ~~~pgv~e~L~~~g-~~l~IvTn~~~~---~~~~~L~~~~gl~~~F~~iv~~d~~-PkPe~l~~~l~~~~~ 204 (208)
.-||-..-+|++.| ..-.|.+++... .++.++.++ + --.+|.-+|++ .+|++|.+....||+
T Consensus 237 ~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~-p---~~kfvLVGDsGE~DpeIYae~v~~fP~ 303 (373)
T COG4850 237 RNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRY-P---DRKFVLVGDSGEHDPEIYAEMVRCFPN 303 (373)
T ss_pred CCCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhC-C---CceEEEecCCCCcCHHHHHHHHHhCcc
Confidence 33555556665444 333444443332 333355553 2 23567778888 999999999999997
No 270
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=24.12 E-value=1.6e+02 Score=24.53 Aligned_cols=29 Identities=24% Similarity=0.165 Sum_probs=25.6
Q ss_pred HhCCCcEEEEcCCcHHHHHHHHHhhCCCCC
Q 028496 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (208)
Q Consensus 149 ~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~ 178 (208)
++.|+++..+|||++..+...-+.+ |+..
T Consensus 36 ~d~G~~Vi~~SSKT~aE~~~l~~~l-~v~~ 64 (274)
T COG3769 36 KDAGVPVILCSSKTRAEMLYLQKSL-GVQG 64 (274)
T ss_pred HHcCCeEEEeccchHHHHHHHHHhc-CCCC
Confidence 7899999999999999998888884 8873
No 271
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=23.45 E-value=91 Score=25.90 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=28.5
Q ss_pred CCCCCHHHHH---Hh-CCCcEEEEcCCcHHHHHHHHHhhCCC
Q 028496 139 RFYPGIPDAL---KF-ASSRIYIVTTKQSRFADALLRELAGV 176 (208)
Q Consensus 139 ~~~pgv~e~L---~~-~g~~l~IvTn~~~~~~~~~L~~~~gl 176 (208)
.+-|.+.++| ++ .|+.++|+|+.+...+...++.+ ++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~ 76 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RF 76 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cc
Confidence 4557777777 34 68999999999999998887663 53
No 272
>PF03387 Herpes_UL46: Herpesvirus UL46 protein; InterPro: IPR005051 The UL46 protein (VP11/12) is produced in the late phase of Herpes virus infection in a manner highly dependent on viral DNA synthesis, and is mainly distributed at the edge of the nucleus in the cytoplasm. It is a tegument phosphoprotein reported to modulate the activity of UL48 (anti-TNF) protein.; GO: 0006355 regulation of transcription, DNA-dependent
Probab=23.41 E-value=5.7e+02 Score=23.31 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=63.4
Q ss_pred cCccccCCcchhhHHHHHHHHHhCCCCCCCCccchhHHHHHHHhhhcCcccchhHHHHHHHHHHhhcCCcccccccCCCC
Q 028496 9 FDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEIRMPSIRKSSVSEGL 88 (208)
Q Consensus 9 ~DGTLvDs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (208)
.+|+|+.+......+|..+-.+......-+ .-+|....+.+...-.....+-+++..+. |.
T Consensus 16 ~~gClLptp~~~~~aAv~AL~~~ae~~~p~-----~L~~~~R~~~L~~~~~N~VPEs~Iv~~~~--------------~D 76 (444)
T PF03387_consen 16 EKGCLLPTPEDLLEAAVRALRDRAEEVLPA-----GLFSADRASALAARRDNTVPESLIVRCVA--------------GD 76 (444)
T ss_pred cCceecCCchhHHHHHHHHHHHHHHhcCCc-----ccccHHHHHHHhcCCCCCCChHHHHHhhc--------------cC
Confidence 479999999888888887755552222110 00222223333333334555555445553 34
Q ss_pred CHHHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 028496 89 TVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMD 128 (208)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 128 (208)
+.+++...|..-.+..+.+.|++.+.+.+.+...|-.+.+
T Consensus 77 ~~~eY~r~Y~~a~k~~l~~~~ls~~~v~r~~~a~YwkyL~ 116 (444)
T PF03387_consen 77 TNGEYRRHYDAAAKRRLARAGLSRDAVWRAYLASYWKYLQ 116 (444)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 4567788888888899999999999888777766666554
No 273
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=22.04 E-value=1.1e+02 Score=30.81 Aligned_cols=40 Identities=15% Similarity=0.299 Sum_probs=35.0
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHHHHHHHhhCCCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP 179 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~~~~L~~~~gl~~~ 179 (208)
+|-||+.+++ +++|+++.++|+-....+..+-.. .|+-..
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii~~ 673 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLLSR 673 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCCCC
Confidence 6789999998 689999999999999999999888 488653
No 274
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=20.94 E-value=1.7e+02 Score=24.15 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=27.1
Q ss_pred CCCCCHHHHH---HhCCCcEEEEcCCcHHHH---HHHHHhhCCCC
Q 028496 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFA---DALLRELAGVT 177 (208)
Q Consensus 139 ~~~pgv~e~L---~~~g~~l~IvTn~~~~~~---~~~L~~~~gl~ 177 (208)
.+.||+.|.| +.++.++-.+||.+.++- ...|.++ |+.
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rl-gf~ 66 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRL-GFD 66 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHh-CCC
Confidence 3789999998 567889999999776544 4445553 543
No 275
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=20.62 E-value=37 Score=25.28 Aligned_cols=11 Identities=9% Similarity=0.096 Sum_probs=9.4
Q ss_pred ceeeeecCccc
Q 028496 3 DLYALDFDGVL 13 (208)
Q Consensus 3 ~~viFD~DGTL 13 (208)
..|.|||.|||
T Consensus 46 ~iV~FDmK~Tl 56 (128)
T PRK13717 46 VTAAFNMKQTV 56 (128)
T ss_pred eEEEEehHHHH
Confidence 57899999987
Done!