Query 028497
Match_columns 208
No_of_seqs 127 out of 1123
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 20:42:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028497.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028497hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz0_A Glycerophosphoryl diest 100.0 2E-40 7E-45 264.8 21.3 188 2-193 52-249 (252)
2 3qvq_A Phosphodiesterase OLEI0 100.0 2.3E-40 8E-45 264.5 20.9 190 2-195 50-250 (252)
3 3ks6_A Glycerophosphoryl diest 100.0 2.6E-39 9E-44 258.1 19.9 195 2-197 43-246 (250)
4 2otd_A Glycerophosphodiester p 100.0 1.3E-39 4.4E-44 259.5 16.1 188 2-193 47-245 (247)
5 2o55_A Putative glycerophospho 100.0 2.4E-38 8.1E-43 253.7 20.8 188 2-193 49-254 (258)
6 3l12_A Putative glycerophospho 100.0 4.4E-38 1.5E-42 258.6 22.9 192 2-193 58-306 (313)
7 2oog_A Glycerophosphoryl diest 100.0 1.6E-37 5.5E-42 252.4 19.7 189 2-194 65-280 (287)
8 1zcc_A Glycerophosphodiester p 100.0 1.9E-39 6.3E-44 258.7 5.0 188 2-195 42-235 (248)
9 3no3_A Glycerophosphodiester p 100.0 9.2E-37 3.1E-41 241.7 16.8 183 2-195 47-236 (238)
10 3ch0_A Glycerophosphodiester p 100.0 2.9E-36 1E-40 243.2 17.0 184 2-189 49-270 (272)
11 1o1z_A GDPD, glycerophosphodie 100.0 1.6E-36 5.6E-41 239.6 15.2 174 2-191 53-233 (234)
12 1vd6_A Glycerophosphoryl diest 100.0 4.9E-36 1.7E-40 235.6 16.4 174 2-191 48-222 (224)
13 3mz2_A Glycerophosphoryl diest 100.0 9E-36 3.1E-40 242.2 17.9 189 2-203 73-286 (292)
14 1ydy_A Glycerophosphoryl diest 100.0 7.6E-34 2.6E-38 237.2 17.0 191 2-192 71-355 (356)
15 3i10_A Putative glycerophospho 100.0 1.8E-30 6.1E-35 209.3 15.1 183 2-195 58-274 (278)
16 1xx1_A Smase I, sphingomyelina 100.0 8.9E-30 3E-34 206.6 9.6 181 2-194 39-263 (285)
17 3rlg_A Sphingomyelin phosphodi 99.5 4.1E-14 1.4E-18 113.0 11.0 181 2-194 62-280 (302)
18 4e38_A Keto-hydroxyglutarate-a 96.6 0.13 4.3E-06 39.8 14.4 141 45-198 25-171 (232)
19 1wa3_A 2-keto-3-deoxy-6-phosph 95.8 0.19 6.4E-06 37.6 11.9 118 57-184 11-132 (205)
20 1vhc_A Putative KHG/KDPG aldol 95.8 0.31 1.1E-05 37.3 13.0 144 43-199 6-155 (224)
21 1i4n_A Indole-3-glycerol phosp 95.7 0.54 1.8E-05 36.7 15.3 135 46-186 30-181 (251)
22 3qja_A IGPS, indole-3-glycerol 95.1 0.38 1.3E-05 38.0 11.6 151 26-184 24-190 (272)
23 1mxs_A KDPG aldolase; 2-keto-3 95.0 0.9 3.1E-05 34.7 13.8 141 44-197 16-162 (225)
24 3f4w_A Putative hexulose 6 pho 94.9 0.091 3.1E-06 39.5 7.5 91 93-183 38-134 (211)
25 1vkf_A Glycerol uptake operon 94.9 0.25 8.6E-06 36.7 9.5 140 40-188 41-182 (188)
26 3lab_A Putative KDPG (2-keto-3 94.9 0.2 6.8E-06 38.2 9.2 120 72-199 25-157 (217)
27 1pii_A N-(5'phosphoribosyl)ant 94.8 0.61 2.1E-05 39.6 12.7 149 27-186 23-187 (452)
28 1wbh_A KHG/KDPG aldolase; lyas 94.6 0.9 3.1E-05 34.4 12.2 139 46-197 8-152 (214)
29 2yw3_A 4-hydroxy-2-oxoglutarat 94.2 1.3 4.5E-05 33.3 12.8 111 77-196 30-146 (207)
30 3q58_A N-acetylmannosamine-6-p 94.1 1.5 5E-05 33.6 14.9 132 44-182 7-155 (229)
31 3kts_A Glycerol uptake operon 93.4 0.83 2.9E-05 34.1 9.7 145 39-189 38-185 (192)
32 3tsm_A IGPS, indole-3-glycerol 93.3 2.4 8.1E-05 33.4 16.0 140 40-184 42-197 (272)
33 4a29_A Engineered retro-aldol 93.3 1.6 5.6E-05 34.0 11.5 138 38-183 27-180 (258)
34 3inp_A D-ribulose-phosphate 3- 93.0 1.2 4.1E-05 34.6 10.4 86 92-181 70-161 (246)
35 3igs_A N-acetylmannosamine-6-p 92.9 2.4 8.3E-05 32.4 15.8 133 43-182 6-155 (232)
36 4f3h_A Fimxeal, putative uncha 92.4 2.9 9.9E-05 31.9 12.7 125 56-183 95-241 (250)
37 3jr2_A Hexulose-6-phosphate sy 92.3 0.87 3E-05 34.4 8.8 88 94-182 45-138 (218)
38 1tqj_A Ribulose-phosphate 3-ep 92.2 0.66 2.3E-05 35.5 8.0 112 92-206 47-174 (230)
39 3pjx_A Cyclic dimeric GMP bind 92.0 1.9 6.4E-05 35.9 11.2 134 44-183 264-421 (430)
40 1x7f_A Outer surface protein; 91.9 0.93 3.2E-05 37.6 8.9 155 39-197 71-264 (385)
41 2d73_A Alpha-glucosidase SUSB; 91.4 0.5 1.7E-05 42.4 7.2 60 145-204 421-502 (738)
42 2ekc_A AQ_1548, tryptophan syn 91.2 1.1 3.8E-05 34.9 8.5 57 146-205 83-149 (262)
43 3bo9_A Putative nitroalkan dio 90.6 3.6 0.00012 33.1 11.2 105 77-184 42-152 (326)
44 2r6o_A Putative diguanylate cy 90.4 5.4 0.00018 31.5 12.0 134 57-193 116-274 (294)
45 3usb_A Inosine-5'-monophosphat 90.4 4 0.00014 35.1 11.9 109 73-185 257-390 (511)
46 2gjl_A Hypothetical protein PA 89.1 3.9 0.00013 32.8 10.3 53 129-183 93-145 (328)
47 3bw2_A 2-nitropropane dioxygen 89.0 1.2 4.1E-05 36.5 7.3 54 129-183 119-172 (369)
48 1y0e_A Putative N-acetylmannos 88.4 6.3 0.00022 29.4 11.1 108 72-183 23-146 (223)
49 3hv8_A Protein FIMX; EAL phosp 88.4 7.2 0.00025 30.0 11.8 110 72-183 120-250 (268)
50 3f4w_A Putative hexulose 6 pho 87.7 6.8 0.00023 28.9 12.7 137 46-193 42-204 (211)
51 3ovp_A Ribulose-phosphate 3-ep 86.6 7.9 0.00027 29.4 10.1 68 92-161 47-118 (228)
52 3zwt_A Dihydroorotate dehydrog 86.4 7.9 0.00027 31.7 10.6 60 146-205 286-355 (367)
53 3ble_A Citramalate synthase fr 86.4 12 0.0004 30.3 12.2 55 145-199 140-211 (337)
54 1tqx_A D-ribulose-5-phosphate 86.2 6.4 0.00022 30.0 9.4 85 92-180 48-142 (227)
55 4fxs_A Inosine-5'-monophosphat 86.0 9.1 0.00031 32.7 11.2 107 74-184 233-364 (496)
56 2v82_A 2-dehydro-3-deoxy-6-pho 85.9 8.8 0.0003 28.4 10.0 53 127-182 75-127 (212)
57 3khj_A Inosine-5-monophosphate 85.7 5.2 0.00018 32.8 9.2 81 99-182 87-172 (361)
58 3kts_A Glycerol uptake operon 85.2 3.9 0.00013 30.4 7.5 49 145-193 44-99 (192)
59 2bas_A YKUI protein; EAL domai 84.8 16 0.00053 30.5 12.0 136 45-183 94-255 (431)
60 3a24_A Alpha-galactosidase; gl 84.7 1.3 4.3E-05 39.3 5.3 59 145-203 350-418 (641)
61 2z6i_A Trans-2-enoyl-ACP reduc 84.5 4.7 0.00016 32.4 8.4 104 77-183 28-137 (332)
62 3o63_A Probable thiamine-phosp 84.3 4.8 0.00016 31.0 7.9 57 126-183 106-162 (243)
63 1vkf_A Glycerol uptake operon 84.2 3.6 0.00012 30.5 6.8 49 145-193 46-100 (188)
64 3vzx_A Heptaprenylglyceryl pho 84.0 3.6 0.00012 31.5 7.0 65 131-196 152-226 (228)
65 1yad_A Regulatory protein TENI 84.0 3 0.0001 31.3 6.6 57 126-184 82-138 (221)
66 3hvb_A Protein FIMX; EAL phosp 83.4 18 0.00061 29.9 12.1 110 72-183 289-419 (437)
67 1qop_A Tryptophan synthase alp 82.9 1.8 6.3E-05 33.8 5.2 37 146-182 83-128 (268)
68 4adt_A Pyridoxine biosynthetic 82.4 2.2 7.7E-05 34.0 5.5 86 95-184 66-153 (297)
69 4hjf_A Ggdef family protein; s 82.4 18 0.00061 29.1 11.8 134 57-194 165-327 (340)
70 3s83_A Ggdef family protein; s 82.3 14 0.00049 28.0 11.7 121 57-183 92-237 (259)
71 3vk5_A MOEO5; TIM barrel, tran 82.3 2.9 9.9E-05 33.1 6.0 65 131-195 198-275 (286)
72 3ctl_A D-allulose-6-phosphate 82.1 6.3 0.00022 30.1 7.8 86 92-181 42-133 (231)
73 4fo4_A Inosine 5'-monophosphat 80.9 5.4 0.00019 32.7 7.4 106 76-182 61-176 (366)
74 3igs_A N-acetylmannosamine-6-p 80.5 14 0.00048 28.1 9.3 65 129-193 146-224 (232)
75 1h1y_A D-ribulose-5-phosphate 79.8 14 0.00048 27.8 9.1 86 93-182 50-144 (228)
76 1yxy_A Putative N-acetylmannos 79.8 17 0.00058 27.2 14.9 131 43-180 6-157 (234)
77 1wv2_A Thiazole moeity, thiazo 79.7 4 0.00014 31.9 5.8 36 147-182 127-162 (265)
78 2e6f_A Dihydroorotate dehydrog 79.2 11 0.00039 29.7 8.8 60 146-205 233-301 (314)
79 2p0o_A Hypothetical protein DU 78.8 11 0.00036 31.1 8.4 150 40-195 48-234 (372)
80 3ajx_A 3-hexulose-6-phosphate 76.9 12 0.0004 27.5 7.7 86 94-180 39-131 (207)
81 4avf_A Inosine-5'-monophosphat 76.8 33 0.0011 29.2 11.3 108 72-183 229-361 (490)
82 1jcn_A Inosine monophosphate d 76.5 7.2 0.00025 33.4 7.2 53 130-182 265-323 (514)
83 3nav_A Tryptophan synthase alp 76.2 18 0.00061 28.3 8.8 102 97-198 86-206 (271)
84 1eep_A Inosine 5'-monophosphat 75.8 11 0.00036 31.2 7.9 52 131-182 164-221 (404)
85 1rd5_A Tryptophan synthase alp 75.8 8.9 0.0003 29.5 7.0 38 146-183 84-125 (262)
86 3vnd_A TSA, tryptophan synthas 75.8 9.4 0.00032 29.8 7.1 56 146-204 84-149 (267)
87 1m5w_A Pyridoxal phosphate bio 75.7 6.1 0.00021 30.4 5.8 131 39-182 22-154 (243)
88 3sy8_A ROCR; TIM barrel phosph 75.4 4.1 0.00014 33.5 5.2 57 146-202 337-396 (400)
89 3gfz_A Klebsiella pneumoniae B 75.3 16 0.00055 30.2 8.9 108 72-183 258-389 (413)
90 3sr7_A Isopentenyl-diphosphate 74.9 8.2 0.00028 31.7 6.8 110 71-183 102-237 (365)
91 1nvm_A HOA, 4-hydroxy-2-oxoval 74.8 31 0.0011 27.7 12.0 102 96-199 70-191 (345)
92 3i65_A Dihydroorotate dehydrog 74.4 21 0.00073 29.7 9.3 60 146-205 333-402 (415)
93 1wv2_A Thiazole moeity, thiazo 74.3 7.5 0.00026 30.3 6.0 64 131-194 155-234 (265)
94 3ffs_A Inosine-5-monophosphate 74.1 8.3 0.00028 32.0 6.7 52 131-182 155-211 (400)
95 3o6c_A PNP synthase, pyridoxin 74.1 7 0.00024 30.4 5.8 132 38-183 21-152 (260)
96 1xi3_A Thiamine phosphate pyro 74.0 15 0.00051 26.9 7.7 56 126-183 80-135 (215)
97 3obk_A Delta-aminolevulinic ac 73.9 12 0.00042 30.2 7.3 66 131-196 259-345 (356)
98 3nav_A Tryptophan synthase alp 73.8 13 0.00045 29.0 7.5 57 146-205 86-152 (271)
99 1vc4_A Indole-3-glycerol phosp 73.5 21 0.00071 27.5 8.6 134 43-184 36-182 (254)
100 1vrd_A Inosine-5'-monophosphat 73.1 24 0.00084 29.8 9.6 109 74-186 239-372 (494)
101 4fo4_A Inosine 5'-monophosphat 73.0 37 0.0013 27.7 10.3 103 78-183 113-240 (366)
102 1to3_A Putative aldolase YIHT; 73.0 8.1 0.00028 30.8 6.2 54 146-199 146-220 (304)
103 2yxb_A Coenzyme B12-dependent 72.9 23 0.00077 25.2 10.1 51 145-195 87-142 (161)
104 3w01_A Heptaprenylglyceryl pho 72.3 5.4 0.00019 30.6 4.8 62 131-193 158-229 (235)
105 2p10_A MLL9387 protein; putati 71.8 3.5 0.00012 32.6 3.7 39 146-185 154-192 (286)
106 1w5q_A Delta-aminolevulinic ac 71.7 12 0.00041 30.1 6.7 63 131-193 252-334 (337)
107 2obb_A Hypothetical protein; s 71.0 8.6 0.00029 27.0 5.3 44 145-188 30-79 (142)
108 1o4u_A Type II quinolic acid p 71.0 13 0.00045 29.3 6.9 50 146-196 181-235 (285)
109 3tlq_A Regulatory protein YDIV 70.9 5.8 0.0002 30.2 4.8 39 145-183 188-226 (242)
110 3kzp_A LMO0111 protein, putati 70.3 4.3 0.00015 30.5 3.9 36 146-181 190-225 (235)
111 3gk0_A PNP synthase, pyridoxin 69.9 7.7 0.00026 30.4 5.2 134 37-182 48-182 (278)
112 3vnd_A TSA, tryptophan synthas 69.8 31 0.0011 26.8 8.8 103 96-198 83-204 (267)
113 3tqv_A Nicotinate-nucleotide p 68.4 12 0.0004 29.7 6.0 50 146-196 187-240 (287)
114 1jub_A Dihydroorotate dehydrog 68.1 41 0.0014 26.3 16.5 59 146-204 230-298 (311)
115 2c6q_A GMP reductase 2; TIM ba 67.7 47 0.0016 26.8 10.2 87 97-186 150-255 (351)
116 3q58_A N-acetylmannosamine-6-p 66.9 39 0.0013 25.5 11.7 137 39-183 53-210 (229)
117 3cu2_A Ribulose-5-phosphate 3- 66.1 6.6 0.00022 30.1 4.1 107 92-203 56-185 (237)
118 1yxy_A Putative N-acetylmannos 65.9 39 0.0013 25.2 12.6 84 96-183 121-215 (234)
119 1w1z_A Delta-aminolevulinic ac 65.8 10 0.00034 30.4 5.1 62 131-192 245-327 (328)
120 1h7n_A 5-aminolaevulinic acid 65.4 9 0.00031 30.9 4.8 63 131-193 255-339 (342)
121 2c6q_A GMP reductase 2; TIM ba 65.4 8.4 0.00029 31.4 4.9 51 132-182 132-188 (351)
122 3glc_A Aldolase LSRF; TIM barr 65.0 16 0.00054 29.0 6.2 56 131-186 137-212 (295)
123 1wa3_A 2-keto-3-deoxy-6-phosph 64.9 17 0.00059 26.5 6.3 53 131-183 34-90 (205)
124 1viz_A PCRB protein homolog; s 64.2 13 0.00045 28.5 5.5 40 143-183 168-210 (240)
125 4avf_A Inosine-5'-monophosphat 63.6 61 0.0021 27.5 10.1 52 131-182 240-297 (490)
126 1pv8_A Delta-aminolevulinic ac 63.4 8.5 0.00029 30.9 4.3 63 131-193 244-328 (330)
127 1eep_A Inosine 5'-monophosphat 62.4 54 0.0019 26.9 9.4 86 97-185 183-287 (404)
128 1y0e_A Putative N-acetylmannos 62.3 44 0.0015 24.6 11.0 99 81-183 84-204 (223)
129 1ep3_A Dihydroorotate dehydrog 61.8 54 0.0019 25.5 12.5 59 146-204 231-296 (311)
130 1l6s_A Porphobilinogen synthas 61.4 21 0.00071 28.5 6.2 62 131-192 238-320 (323)
131 1ydn_A Hydroxymethylglutaryl-C 61.1 56 0.0019 25.4 10.7 55 145-199 123-197 (295)
132 2nva_A Arginine decarboxylase, 61.0 63 0.0022 26.0 10.1 45 148-192 74-122 (372)
133 2cw6_A Hydroxymethylglutaryl-C 60.9 58 0.002 25.5 11.5 54 145-198 124-197 (298)
134 2qgh_A Diaminopimelate decarbo 60.9 69 0.0024 26.3 10.5 110 77-193 24-141 (425)
135 3exr_A RMPD (hexulose-6-phosph 60.6 50 0.0017 24.7 9.8 92 91-184 41-142 (221)
136 3jr2_A Hexulose-6-phosphate sy 60.5 49 0.0017 24.5 8.3 126 47-183 49-194 (218)
137 3r2g_A Inosine 5'-monophosphat 60.0 12 0.00041 30.6 4.8 52 131-182 111-168 (361)
138 1thf_D HISF protein; thermophI 59.6 28 0.00096 26.2 6.8 50 146-195 64-120 (253)
139 1p0k_A Isopentenyl-diphosphate 59.4 55 0.0019 26.2 8.8 107 76-183 77-209 (349)
140 3oix_A Putative dihydroorotate 59.2 20 0.00068 29.1 6.0 60 146-205 263-332 (345)
141 2y8u_A Chitin deacetylase; hyd 59.0 54 0.0019 24.6 8.6 92 72-165 45-156 (230)
142 2rbg_A Putative uncharacterize 58.9 6.6 0.00023 26.5 2.5 41 153-193 62-107 (126)
143 3sgz_A Hydroxyacid oxidase 2; 58.5 18 0.00061 29.5 5.6 43 141-183 202-245 (352)
144 4gj1_A 1-(5-phosphoribosyl)-5- 57.9 37 0.0013 25.8 7.1 58 143-200 62-126 (243)
145 1qpo_A Quinolinate acid phosph 57.9 23 0.00079 27.9 6.0 50 146-196 183-236 (284)
146 2htm_A Thiazole biosynthesis p 57.7 31 0.0011 26.9 6.6 53 142-194 162-225 (268)
147 3vab_A Diaminopimelate decarbo 57.6 81 0.0028 26.2 9.8 110 77-193 40-157 (443)
148 3tdn_A FLR symmetric alpha-bet 57.6 32 0.0011 25.9 6.8 52 144-195 67-125 (247)
149 2f6u_A GGGPS, (S)-3-O-geranylg 57.6 13 0.00043 28.5 4.3 40 143-183 176-218 (234)
150 3n2b_A Diaminopimelate decarbo 57.4 83 0.0028 26.2 10.3 110 77-193 43-160 (441)
151 3a5v_A Alpha-galactosidase; be 56.9 11 0.00037 31.2 4.2 40 145-184 77-130 (397)
152 1ka9_F Imidazole glycerol phos 56.2 25 0.00086 26.5 6.0 50 146-195 65-121 (252)
153 4dbe_A Orotidine 5'-phosphate 56.0 62 0.0021 24.3 10.0 96 41-138 91-186 (222)
154 2l82_A Designed protein OR32; 55.7 43 0.0015 22.3 11.9 51 145-195 93-148 (162)
155 7odc_A Protein (ornithine deca 55.1 83 0.0028 26.0 9.3 49 144-192 91-143 (424)
156 3e8m_A Acylneuraminate cytidyl 54.6 35 0.0012 23.4 6.2 51 145-195 37-91 (164)
157 1rpx_A Protein (ribulose-phosp 54.1 64 0.0022 23.9 10.4 85 94-180 55-144 (230)
158 3lte_A Response regulator; str 54.1 41 0.0014 21.7 8.7 49 146-194 67-121 (132)
159 1x1o_A Nicotinate-nucleotide p 54.0 24 0.00082 27.8 5.5 48 147-195 185-237 (286)
160 3l49_A ABC sugar (ribose) tran 54.0 60 0.0021 24.4 7.9 37 146-182 26-67 (291)
161 1lt8_A Betaine-homocysteine me 53.9 48 0.0017 27.5 7.6 71 131-201 151-237 (406)
162 1ccw_A Protein (glutamate muta 53.8 50 0.0017 22.5 6.7 47 146-192 73-130 (137)
163 2p9j_A Hypothetical protein AQ 52.9 51 0.0017 22.5 6.8 51 145-195 42-96 (162)
164 3nhm_A Response regulator; pro 52.7 29 0.001 22.5 5.3 49 146-194 64-118 (133)
165 3s1x_A Probable transaldolase; 52.7 72 0.0025 24.1 12.2 132 44-183 42-188 (223)
166 1h5y_A HISF; histidine biosynt 52.6 20 0.00068 26.8 4.8 50 146-195 67-123 (253)
167 4fxs_A Inosine-5'-monophosphat 52.6 35 0.0012 29.0 6.7 52 131-182 242-299 (496)
168 2w6r_A Imidazole glycerol phos 52.2 29 0.00098 26.5 5.7 50 144-193 62-121 (266)
169 4af0_A Inosine-5'-monophosphat 51.9 70 0.0024 27.7 8.3 105 74-183 283-413 (556)
170 2nx9_A Oxaloacetate decarboxyl 51.6 1.1E+02 0.0037 25.8 13.6 104 96-199 67-200 (464)
171 1uas_A Alpha-galactosidase; TI 51.6 19 0.00065 29.2 4.8 41 145-185 77-132 (362)
172 2y88_A Phosphoribosyl isomeras 51.4 46 0.0016 24.8 6.7 50 146-195 64-120 (244)
173 1ny1_A Probable polysaccharide 51.4 75 0.0026 23.9 8.4 92 72-165 56-168 (240)
174 2plj_A Lysine/ornithine decarb 51.1 70 0.0024 26.3 8.3 25 165-189 133-157 (419)
175 3ajx_A 3-hexulose-6-phosphate 51.0 67 0.0023 23.2 12.6 118 56-181 54-184 (207)
176 1q6o_A Humps, 3-keto-L-gulonat 50.9 71 0.0024 23.5 10.0 88 92-182 40-135 (216)
177 1ujp_A Tryptophan synthase alp 50.8 43 0.0015 26.0 6.5 38 146-183 81-126 (271)
178 1rqb_A Transcarboxylase 5S sub 50.6 1.2E+02 0.0042 26.1 13.7 104 96-199 84-217 (539)
179 2xij_A Methylmalonyl-COA mutas 50.2 64 0.0022 29.2 8.2 65 129-193 652-727 (762)
180 2o0t_A Diaminopimelate decarbo 49.8 1.1E+02 0.0039 25.5 10.1 110 77-193 33-149 (467)
181 1jcn_A Inosine monophosphate d 49.8 62 0.0021 27.5 7.9 104 79-185 261-389 (514)
182 3nl6_A Thiamine biosynthetic b 49.2 82 0.0028 27.1 8.6 56 126-182 79-137 (540)
183 3qja_A IGPS, indole-3-glycerol 49.1 90 0.0031 24.2 12.3 111 79-193 129-259 (272)
184 2dh2_A 4F2 cell-surface antige 49.0 31 0.0011 28.6 5.8 41 145-185 85-144 (424)
185 3tsm_A IGPS, indole-3-glycerol 48.7 93 0.0032 24.2 9.8 106 81-190 138-263 (272)
186 1ydn_A Hydroxymethylglutaryl-C 48.7 43 0.0015 26.1 6.3 37 146-183 62-99 (295)
187 1ypf_A GMP reductase; GUAC, pu 47.4 20 0.0007 28.7 4.3 38 145-182 137-176 (336)
188 3r8r_A Transaldolase; pentose 47.2 87 0.003 23.4 12.1 140 44-192 40-194 (212)
189 3fwz_A Inner membrane protein 47.0 57 0.0019 21.9 6.1 39 144-182 39-77 (140)
190 2yxx_A Diaminopimelate decarbo 46.8 1.1E+02 0.0038 24.6 10.5 50 143-192 67-120 (386)
191 4ef8_A Dihydroorotate dehydrog 46.8 31 0.001 28.1 5.2 60 146-205 266-334 (354)
192 8abp_A L-arabinose-binding pro 46.7 55 0.0019 24.8 6.7 38 146-183 23-64 (306)
193 2j13_A Polysaccharide deacetyl 46.7 92 0.0032 23.5 9.7 91 72-164 68-179 (247)
194 1vhn_A Putative flavin oxidore 46.4 83 0.0028 24.8 7.7 86 98-185 117-215 (318)
195 3ij5_A 3-deoxy-D-manno-octulos 46.3 42 0.0014 24.7 5.7 49 147-195 84-136 (211)
196 2j66_A BTRK, decarboxylase; bu 46.0 1.2E+02 0.0042 24.8 11.1 111 76-193 7-124 (428)
197 1qpo_A Quinolinate acid phosph 45.9 1.1E+02 0.0036 24.0 8.9 81 97-183 183-269 (284)
198 3paj_A Nicotinate-nucleotide p 45.9 45 0.0015 26.8 5.9 49 146-195 220-272 (320)
199 2vws_A YFAU, 2-keto-3-deoxy su 45.8 42 0.0014 25.9 5.7 48 146-194 201-249 (267)
200 2v5j_A 2,4-dihydroxyhept-2-ENE 45.7 43 0.0015 26.3 5.8 38 146-184 222-259 (287)
201 4e38_A Keto-hydroxyglutarate-a 45.6 52 0.0018 25.0 6.1 53 131-183 58-113 (232)
202 3jy6_A Transcriptional regulat 45.6 63 0.0021 24.2 6.8 34 149-182 31-69 (276)
203 1p4c_A L(+)-mandelate dehydrog 45.2 36 0.0012 27.8 5.5 41 142-182 211-252 (380)
204 1vzw_A Phosphoribosyl isomeras 45.1 73 0.0025 23.7 7.0 50 146-195 65-121 (244)
205 3n1u_A Hydrolase, HAD superfam 45.0 59 0.002 23.3 6.2 49 147-195 54-106 (191)
206 3hcw_A Maltose operon transcri 44.7 84 0.0029 23.8 7.5 59 146-208 152-220 (295)
207 2ftp_A Hydroxymethylglutaryl-C 44.7 1.1E+02 0.0038 23.9 12.5 54 145-198 127-200 (302)
208 1dxe_A 2-dehydro-3-deoxy-galac 44.6 43 0.0015 25.6 5.6 39 146-185 201-239 (256)
209 2e0i_A 432AA long hypothetical 44.4 51 0.0017 27.6 6.4 58 146-204 60-119 (440)
210 1f76_A Dihydroorotate dehydrog 44.2 74 0.0025 25.2 7.2 40 146-185 277-320 (336)
211 2qjg_A Putative aldolase MJ040 43.9 19 0.00064 27.7 3.4 56 130-185 110-188 (273)
212 3l0g_A Nicotinate-nucleotide p 43.7 24 0.00083 28.0 4.0 50 146-196 196-249 (300)
213 2nli_A Lactate oxidase; flavoe 43.5 53 0.0018 26.7 6.2 43 142-184 215-258 (368)
214 3hg3_A Alpha-galactosidase A; 43.1 27 0.00094 29.0 4.4 40 145-184 87-140 (404)
215 1ka9_F Imidazole glycerol phos 43.0 37 0.0013 25.6 5.0 40 144-183 184-225 (252)
216 1o4u_A Type II quinolic acid p 43.0 67 0.0023 25.2 6.5 81 97-183 181-268 (285)
217 3luf_A Two-component system re 42.9 46 0.0016 25.2 5.5 38 146-183 65-103 (259)
218 2v82_A 2-dehydro-3-deoxy-6-pho 42.8 94 0.0032 22.6 8.9 51 130-181 119-174 (212)
219 3l9w_A Glutathione-regulated p 42.7 1.4E+02 0.0048 24.5 10.7 113 72-193 14-132 (413)
220 2htm_A Thiazole biosynthesis p 42.6 15 0.00053 28.6 2.7 34 149-182 118-151 (268)
221 1x7f_A Outer surface protein; 42.6 1.4E+02 0.0048 24.5 8.7 100 76-178 45-163 (385)
222 1qop_A Tryptophan synthase alp 42.4 45 0.0015 25.7 5.4 39 145-183 194-234 (268)
223 3b0p_A TRNA-dihydrouridine syn 42.4 1.3E+02 0.0045 24.1 10.6 53 130-183 155-225 (350)
224 3mmz_A Putative HAD family hyd 42.3 44 0.0015 23.5 5.1 48 147-195 47-98 (176)
225 2ols_A Phosphoenolpyruvate syn 42.2 53 0.0018 29.8 6.5 50 147-197 738-790 (794)
226 1f3t_A ODC, ornithine decarbox 42.1 1.3E+02 0.0044 24.7 8.5 27 165-191 116-142 (425)
227 3lab_A Putative KDPG (2-keto-3 41.9 72 0.0025 24.0 6.3 53 131-183 37-92 (217)
228 2ekc_A AQ_1548, tryptophan syn 41.7 81 0.0028 24.1 6.8 50 146-196 196-257 (262)
229 1ujp_A Tryptophan synthase alp 41.7 43 0.0015 26.0 5.2 37 145-183 191-229 (271)
230 2b7n_A Probable nicotinate-nuc 41.4 59 0.002 25.2 6.0 50 145-195 169-223 (273)
231 1geq_A Tryptophan synthase alp 41.4 16 0.00056 27.6 2.7 39 145-183 69-115 (248)
232 2eja_A URO-D, UPD, uroporphyri 41.1 29 0.001 27.6 4.3 38 148-185 223-261 (338)
233 1xm3_A Thiazole biosynthesis p 41.0 33 0.0011 26.5 4.4 136 42-183 52-207 (264)
234 3kbb_A Phosphorylated carbohyd 40.9 94 0.0032 22.0 8.6 46 145-195 167-215 (216)
235 3snk_A Response regulator CHEY 40.7 72 0.0025 20.6 6.1 48 146-193 76-128 (135)
236 3uug_A Multiple sugar-binding 40.5 80 0.0027 24.2 6.8 38 146-183 24-66 (330)
237 3fwz_A Inner membrane protein 40.4 81 0.0028 21.1 11.4 112 72-193 17-135 (140)
238 1thf_D HISF protein; thermophI 40.4 47 0.0016 25.0 5.2 41 143-183 182-224 (253)
239 1vrd_A Inosine-5'-monophosphat 40.3 33 0.0011 29.0 4.7 52 131-182 248-305 (494)
240 1k1e_A Deoxy-D-mannose-octulos 40.3 50 0.0017 23.2 5.1 52 144-195 40-95 (180)
241 2w6r_A Imidazole glycerol phos 40.3 40 0.0014 25.6 4.9 54 130-183 167-229 (266)
242 3o07_A Pyridoxine biosynthesis 40.2 39 0.0013 26.6 4.6 52 143-194 185-247 (291)
243 3n07_A 3-deoxy-D-manno-octulos 39.9 69 0.0023 23.2 5.9 50 146-195 59-112 (195)
244 2oo0_A ODC, ornithine decarbox 39.9 1.4E+02 0.0049 24.9 8.6 90 97-192 60-153 (471)
245 3mn1_A Probable YRBI family ph 39.8 58 0.002 23.2 5.4 50 146-195 53-106 (189)
246 1szn_A Alpha-galactosidase; (b 39.8 40 0.0014 28.0 5.0 41 145-185 80-134 (417)
247 1tv5_A Dhodehase, dihydroorota 39.7 36 0.0012 28.6 4.7 59 146-204 361-429 (443)
248 3l6u_A ABC-type sugar transpor 39.6 1.1E+02 0.0037 22.9 7.3 35 148-182 31-70 (293)
249 3paj_A Nicotinate-nucleotide p 39.0 1.5E+02 0.005 23.7 10.1 81 97-183 220-303 (320)
250 1rd5_A Tryptophan synthase alp 39.0 39 0.0013 25.8 4.6 37 146-182 191-229 (262)
251 1to3_A Putative aldolase YIHT; 38.8 42 0.0014 26.5 4.8 39 167-205 112-157 (304)
252 3gl9_A Response regulator; bet 38.7 75 0.0026 20.2 7.7 49 146-194 63-118 (122)
253 3to5_A CHEY homolog; alpha(5)b 38.6 90 0.0031 21.1 7.6 40 154-193 86-128 (134)
254 3ijd_A Uncharacterized protein 38.6 48 0.0016 26.5 5.1 40 168-207 167-213 (315)
255 3tjx_A Dihydroorotate dehydrog 38.4 54 0.0018 26.3 5.5 60 146-205 266-334 (354)
256 1zfj_A Inosine monophosphate d 38.4 1.5E+02 0.0052 24.7 8.6 88 97-187 263-369 (491)
257 3heb_A Response regulator rece 38.2 86 0.0029 20.8 7.8 50 146-195 76-132 (152)
258 4a29_A Engineered retro-aldol 38.1 1.4E+02 0.0047 23.1 7.7 98 82-183 123-233 (258)
259 3lua_A Response regulator rece 38.1 82 0.0028 20.5 7.5 50 146-195 68-124 (140)
260 3mm4_A Histidine kinase homolo 37.7 96 0.0033 22.2 6.4 49 146-194 136-192 (206)
261 3fvv_A Uncharacterized protein 37.4 84 0.0029 22.6 6.1 37 146-182 99-136 (232)
262 3tb6_A Arabinose metabolism tr 37.3 1.2E+02 0.004 22.7 7.2 35 148-182 38-77 (298)
263 1l6r_A Hypothetical protein TA 37.3 39 0.0013 25.0 4.2 35 145-179 28-63 (227)
264 2r8e_A 3-deoxy-D-manno-octulos 37.3 77 0.0026 22.4 5.8 50 146-195 60-113 (188)
265 1vpx_A Protein (transaldolase 37.1 47 0.0016 25.2 4.6 32 152-184 9-41 (230)
266 3h1g_A Chemotaxis protein CHEY 37.0 82 0.0028 20.2 7.1 49 146-194 68-123 (129)
267 1ydo_A HMG-COA lyase; TIM-barr 36.9 1.5E+02 0.0052 23.3 12.5 54 145-198 125-198 (307)
268 3rot_A ABC sugar transporter, 36.8 52 0.0018 25.0 5.0 37 146-182 24-67 (297)
269 1h1y_A D-ribulose-5-phosphate 36.8 1E+02 0.0035 22.9 6.5 37 144-180 52-91 (228)
270 3hs3_A Ribose operon repressor 36.6 1.3E+02 0.0045 22.4 7.4 59 146-208 143-206 (277)
271 1w8s_A FBP aldolase, fructose- 36.5 67 0.0023 24.7 5.6 39 147-185 130-181 (263)
272 3k4h_A Putative transcriptiona 36.3 77 0.0026 23.8 6.0 36 147-182 35-75 (292)
273 3m9w_A D-xylose-binding peripl 36.3 91 0.0031 23.8 6.5 37 147-183 24-65 (313)
274 1xrs_B D-lysine 5,6-aminomutas 36.2 1.1E+02 0.0037 23.7 6.6 54 129-184 177-242 (262)
275 3hcw_A Maltose operon transcri 36.2 77 0.0026 24.0 6.0 38 145-182 32-74 (295)
276 1ypf_A GMP reductase; GUAC, pu 36.1 1.6E+02 0.0055 23.3 9.0 89 96-187 137-243 (336)
277 2l69_A Rossmann 2X3 fold prote 36.0 87 0.003 20.2 6.4 45 127-173 70-117 (134)
278 3iwt_A 178AA long hypothetical 35.5 84 0.0029 22.3 5.7 39 145-183 43-88 (178)
279 4do4_A Alpha-N-acetylgalactosa 35.4 55 0.0019 26.6 5.2 40 145-184 86-140 (400)
280 4evq_A Putative ABC transporte 35.4 1.5E+02 0.0053 23.0 7.8 58 145-206 169-233 (375)
281 1xm3_A Thiazole biosynthesis p 35.4 30 0.001 26.7 3.4 37 146-182 114-153 (264)
282 3a21_A Putative secreted alpha 35.0 52 0.0018 28.8 5.2 42 145-186 80-145 (614)
283 2fli_A Ribulose-phosphate 3-ep 34.7 89 0.003 22.7 5.9 49 145-193 50-106 (220)
284 3rfu_A Copper efflux ATPase; a 34.7 77 0.0026 28.5 6.3 53 145-197 560-614 (736)
285 2aef_A Calcium-gated potassium 34.6 93 0.0032 22.9 6.0 102 72-183 19-125 (234)
286 1gox_A (S)-2-hydroxy-acid oxid 34.5 67 0.0023 26.1 5.5 41 144-184 213-254 (370)
287 1twi_A Diaminopimelate decarbo 34.1 1.9E+02 0.0066 23.6 9.1 110 77-193 21-144 (434)
288 4dad_A Putative pilus assembly 34.0 99 0.0034 20.2 6.5 50 146-195 84-138 (146)
289 1req_A Methylmalonyl-COA mutas 33.8 1.8E+02 0.0062 26.1 8.4 55 130-184 645-707 (727)
290 1kbi_A Cytochrome B2, L-LCR; f 33.7 60 0.0021 27.7 5.2 40 143-182 330-370 (511)
291 3hdv_A Response regulator; PSI 33.3 97 0.0033 19.9 7.8 50 146-195 69-124 (136)
292 3j08_A COPA, copper-exporting 33.2 91 0.0031 27.4 6.5 53 145-197 463-517 (645)
293 1mzh_A Deoxyribose-phosphate a 33.0 1.5E+02 0.0051 22.0 9.3 62 129-190 142-211 (225)
294 2nzl_A Hydroxyacid oxidase 1; 32.9 68 0.0023 26.4 5.3 40 144-183 240-280 (392)
295 2qr6_A IMP dehydrogenase/GMP r 32.9 68 0.0023 26.1 5.3 36 149-184 205-240 (393)
296 3gr7_A NADPH dehydrogenase; fl 32.6 1.9E+02 0.0064 23.1 11.4 98 97-195 199-324 (340)
297 3exr_A RMPD (hexulose-6-phosph 32.5 1.5E+02 0.0052 21.9 9.1 120 56-182 59-195 (221)
298 1qo2_A Molecule: N-((5-phospho 32.4 90 0.0031 23.2 5.6 47 145-191 63-115 (241)
299 3lrk_A Alpha-galactosidase 1; 32.4 56 0.0019 27.8 4.7 40 145-184 97-150 (479)
300 3gnn_A Nicotinate-nucleotide p 32.3 38 0.0013 26.8 3.5 49 146-195 198-250 (298)
301 3btn_A Antizyme inhibitor 1; T 32.1 2.2E+02 0.0074 23.6 10.8 90 97-192 50-143 (448)
302 1np7_A DNA photolyase; protein 31.6 90 0.0031 26.3 6.0 58 146-204 69-130 (489)
303 3krt_A Crotonyl COA reductase; 31.5 1.2E+02 0.0041 25.0 6.8 36 146-182 244-279 (456)
304 1v5x_A PRA isomerase, phosphor 31.5 1.5E+02 0.0053 21.7 7.4 57 126-185 69-126 (203)
305 3qz6_A HPCH/HPAI aldolase; str 31.4 75 0.0026 24.4 5.1 47 146-193 199-247 (261)
306 2fep_A Catabolite control prot 31.1 1.4E+02 0.0049 22.4 6.7 34 149-182 40-78 (289)
307 2p3e_A Diaminopimelate decarbo 30.9 2.1E+02 0.0073 23.1 11.3 110 77-193 25-140 (420)
308 2pln_A HP1043, response regula 30.7 1.1E+02 0.0037 19.7 6.2 48 146-193 75-128 (137)
309 3cs3_A Sugar-binding transcrip 30.7 1.6E+02 0.0056 21.8 7.5 58 146-207 139-204 (277)
310 3ovp_A Ribulose-phosphate 3-ep 30.6 92 0.0032 23.3 5.4 134 56-201 65-222 (228)
311 2nzl_A Hydroxyacid oxidase 1; 30.5 1.8E+02 0.0061 23.8 7.4 91 95-189 240-342 (392)
312 3o74_A Fructose transport syst 30.4 1.1E+02 0.0039 22.4 6.0 35 147-181 50-87 (272)
313 1geq_A Tryptophan synthase alp 30.4 66 0.0023 24.0 4.6 38 146-183 181-220 (248)
314 3gv0_A Transcriptional regulat 30.3 1.3E+02 0.0044 22.6 6.3 74 131-204 65-158 (288)
315 3l5l_A Xenobiotic reductase A; 30.2 2.1E+02 0.0073 22.9 9.8 99 97-195 213-342 (363)
316 3nvb_A Uncharacterized protein 30.0 1.2E+02 0.004 25.0 6.2 50 146-195 263-324 (387)
317 3cnb_A DNA-binding response re 30.0 1.1E+02 0.0038 19.6 8.1 50 146-195 71-127 (143)
318 3o0f_A Putative metal-dependen 30.0 97 0.0033 24.4 5.6 59 145-203 186-253 (301)
319 3pct_A Class C acid phosphatas 29.9 32 0.0011 26.6 2.7 35 145-179 107-146 (260)
320 1vzw_A Phosphoribosyl isomeras 29.8 1.7E+02 0.0058 21.6 11.9 135 41-183 61-222 (244)
321 3jvd_A Transcriptional regulat 29.8 1.9E+02 0.0066 22.3 8.7 59 146-208 195-259 (333)
322 1rpx_A Protein (ribulose-phosp 29.7 1.7E+02 0.0057 21.5 8.3 51 131-181 35-96 (230)
323 3hs3_A Ribose operon repressor 29.6 85 0.0029 23.5 5.1 40 145-184 30-75 (277)
324 2zay_A Response regulator rece 29.5 1.2E+02 0.0041 19.8 7.3 49 146-194 69-124 (147)
325 1n2z_A Vitamin B12 transport p 29.3 91 0.0031 23.1 5.2 63 131-195 56-118 (245)
326 1vcf_A Isopentenyl-diphosphate 29.1 69 0.0024 25.4 4.7 39 145-183 171-212 (332)
327 3clm_A Transaldolase; YP_20865 29.1 39 0.0013 27.5 3.1 44 148-192 5-52 (352)
328 1gte_A Dihydropyrimidine dehyd 28.9 1.4E+02 0.0048 27.8 7.3 60 146-205 776-844 (1025)
329 2wm8_A MDP-1, magnesium-depend 28.9 1.1E+02 0.0037 21.4 5.3 34 145-178 74-109 (187)
330 2zbt_A Pyridoxal biosynthesis 28.7 2E+02 0.0068 22.1 9.3 85 95-183 66-152 (297)
331 2gkg_A Response regulator homo 28.6 1.1E+02 0.0038 19.1 6.1 49 146-194 67-121 (127)
332 3ksm_A ABC-type sugar transpor 28.6 1.2E+02 0.004 22.4 5.8 38 147-184 22-67 (276)
333 3huu_A Transcription regulator 28.6 92 0.0032 23.7 5.2 35 148-182 50-89 (305)
334 3usb_A Inosine-5'-monophosphat 28.5 58 0.002 27.8 4.3 52 131-182 267-324 (511)
335 3cz8_A Putative sporulation-sp 28.5 1.9E+02 0.0064 22.6 7.1 61 144-204 55-146 (319)
336 1k66_A Phytochrome response re 28.4 1.2E+02 0.0042 19.6 6.8 49 146-194 79-134 (149)
337 3j09_A COPA, copper-exporting 28.4 1.2E+02 0.0041 27.1 6.5 53 145-197 541-595 (723)
338 3hzh_A Chemotaxis response reg 28.4 1.3E+02 0.0046 20.0 6.9 48 146-193 100-152 (157)
339 2o20_A Catabolite control prot 28.4 2E+02 0.0069 22.1 7.4 58 146-207 201-266 (332)
340 3eeg_A 2-isopropylmalate synth 28.3 2.2E+02 0.0076 22.5 11.6 54 145-198 125-192 (325)
341 1owl_A Photolyase, deoxyribodi 28.3 1.6E+02 0.0055 24.7 7.0 58 146-204 61-122 (484)
342 1kbi_A Cytochrome B2, L-LCR; f 28.3 2E+02 0.0068 24.5 7.6 91 94-188 330-437 (511)
343 3r2g_A Inosine 5'-monophosphat 28.2 2.4E+02 0.0082 22.9 15.2 135 40-185 73-230 (361)
344 1gox_A (S)-2-hydroxy-acid oxid 28.2 2.3E+02 0.008 22.8 8.6 90 94-187 212-313 (370)
345 1nsj_A PRAI, phosphoribosyl an 28.1 1.8E+02 0.0061 21.4 9.6 85 96-184 40-127 (205)
346 2rgy_A Transcriptional regulat 28.0 99 0.0034 23.3 5.3 14 169-182 60-73 (290)
347 3miz_A Putative transcriptiona 27.9 1.3E+02 0.0044 22.7 6.0 36 147-182 36-76 (301)
348 2xz9_A Phosphoenolpyruvate-pro 27.8 1.4E+02 0.0047 23.8 6.2 40 147-187 239-280 (324)
349 3ctl_A D-allulose-6-phosphate 27.8 1.1E+02 0.0037 23.0 5.3 63 131-193 24-103 (231)
350 3fok_A Uncharacterized protein 27.8 98 0.0033 24.6 5.1 45 146-190 167-231 (307)
351 1k68_A Phytochrome response re 27.6 1.2E+02 0.0042 19.3 7.8 50 146-195 72-128 (140)
352 3jte_A Response regulator rece 27.6 1.3E+02 0.0044 19.5 7.1 49 146-194 66-119 (143)
353 3e61_A Putative transcriptiona 27.5 1.3E+02 0.0043 22.3 5.8 37 147-183 56-93 (277)
354 2j4d_A Cryptochrome 3, cryptoc 27.4 1.1E+02 0.0039 26.0 5.9 57 146-203 104-164 (525)
355 1dbq_A Purine repressor; trans 27.3 1.5E+02 0.0051 22.1 6.2 8 109-116 8-15 (289)
356 3qtg_A Pyruvate kinase, PK; TI 27.0 1.9E+02 0.0066 24.4 7.0 58 143-200 269-346 (461)
357 3p9x_A Phosphoribosylglycinami 26.9 1.1E+02 0.0038 22.7 5.2 38 146-183 43-88 (211)
358 2xry_A Deoxyribodipyrimidine p 26.9 1.3E+02 0.0044 25.3 6.2 43 146-188 96-139 (482)
359 3k9c_A Transcriptional regulat 26.9 1.6E+02 0.0054 22.1 6.3 59 146-208 146-213 (289)
360 3kke_A LACI family transcripti 26.8 1.2E+02 0.004 23.1 5.5 8 109-116 16-23 (303)
361 3g1w_A Sugar ABC transporter; 26.5 1.5E+02 0.005 22.4 6.1 14 169-182 54-67 (305)
362 2b7n_A Probable nicotinate-nuc 26.5 2.2E+02 0.0076 21.9 8.2 81 97-183 170-257 (273)
363 1qpz_A PURA, protein (purine n 26.4 1.8E+02 0.0063 22.4 6.7 38 71-116 29-66 (340)
364 1i4n_A Indole-3-glycerol phosp 26.1 1.9E+02 0.0063 22.1 6.4 72 133-205 74-152 (251)
365 2lnd_A De novo designed protei 26.0 1.2E+02 0.0043 18.8 4.6 52 145-196 41-99 (112)
366 2ioy_A Periplasmic sugar-bindi 26.0 1.1E+02 0.0039 22.8 5.3 14 169-182 50-63 (283)
367 3ffs_A Inosine-5-monophosphate 26.0 1.1E+02 0.0036 25.3 5.3 33 151-183 242-275 (400)
368 3hdg_A Uncharacterized protein 26.0 1.3E+02 0.0046 19.2 10.4 51 146-196 68-123 (137)
369 2nli_A Lactate oxidase; flavoe 25.9 2.6E+02 0.0089 22.5 10.2 93 93-189 215-319 (368)
370 3vav_A 3-methyl-2-oxobutanoate 25.8 1.2E+02 0.0043 23.6 5.4 41 143-183 16-56 (275)
371 2jbm_A Nicotinate-nucleotide p 25.8 2.1E+02 0.0071 22.4 6.8 39 156-195 198-238 (299)
372 1x1o_A Nicotinate-nucleotide p 25.7 2.4E+02 0.0081 22.0 9.6 77 98-182 185-267 (286)
373 1xvi_A MPGP, YEDP, putative ma 25.7 90 0.0031 23.7 4.6 35 144-178 31-66 (275)
374 3kto_A Response regulator rece 25.6 1.4E+02 0.0047 19.2 7.9 50 146-195 69-123 (136)
375 3qk7_A Transcriptional regulat 25.6 1.9E+02 0.0067 21.6 6.6 75 131-205 64-158 (294)
376 1i3c_A Response regulator RCP1 25.5 1.5E+02 0.005 19.5 7.8 50 146-195 78-134 (149)
377 3dbi_A Sugar-binding transcrip 25.4 1.5E+02 0.005 22.9 6.0 35 148-182 86-125 (338)
378 3egc_A Putative ribose operon 25.4 1.5E+02 0.0052 22.1 6.0 8 109-116 9-16 (291)
379 1n3y_A Integrin alpha-X; alpha 25.4 88 0.003 22.1 4.3 59 145-203 130-198 (198)
380 1ep3_A Dihydroorotate dehydrog 25.4 96 0.0033 24.0 4.8 38 145-182 153-195 (311)
381 2z6i_A Trans-2-enoyl-ACP reduc 25.3 2.5E+02 0.0085 22.1 10.5 101 76-183 79-191 (332)
382 3e3m_A Transcriptional regulat 25.3 1.6E+02 0.0055 23.0 6.2 15 38-52 9-23 (355)
383 3auf_A Glycinamide ribonucleot 25.2 1.3E+02 0.0045 22.6 5.4 37 147-183 64-108 (229)
384 2inf_A URO-D, UPD, uroporphyri 25.0 1.1E+02 0.0036 24.5 5.1 38 148-185 237-274 (359)
385 3fok_A Uncharacterized protein 24.9 85 0.0029 25.0 4.3 39 168-206 133-179 (307)
386 3kjx_A Transcriptional regulat 24.7 1.4E+02 0.0047 23.2 5.7 48 38-86 7-54 (344)
387 3vkj_A Isopentenyl-diphosphate 24.6 1.3E+02 0.0045 24.4 5.6 111 72-183 76-218 (368)
388 2qu7_A Putative transcriptiona 24.6 2.2E+02 0.0074 21.2 7.5 58 146-207 143-214 (288)
389 3f9r_A Phosphomannomutase; try 24.6 1.1E+02 0.0037 22.9 4.9 31 145-175 27-57 (246)
390 3k9c_A Transcriptional regulat 24.5 80 0.0027 23.8 4.2 17 145-161 56-72 (289)
391 2zos_A MPGP, mannosyl-3-phosph 24.3 88 0.003 23.2 4.3 34 144-177 22-56 (249)
392 2qjg_A Putative aldolase MJ040 24.3 2.3E+02 0.0078 21.3 7.2 53 129-182 176-236 (273)
393 3apt_A Methylenetetrahydrofola 24.3 92 0.0032 24.6 4.5 62 145-207 128-203 (310)
394 2cc0_A Acetyl-xylan esterase; 24.1 2E+02 0.0068 20.5 12.6 90 74-165 19-128 (195)
395 3ve9_A Orotidine-5'-phosphate 24.1 1.6E+02 0.0056 21.8 5.6 37 72-108 115-151 (215)
396 3tha_A Tryptophan synthase alp 24.1 1.2E+02 0.0039 23.4 4.9 36 146-182 189-226 (252)
397 3c3k_A Alanine racemase; struc 24.1 1.9E+02 0.0064 21.6 6.2 60 145-208 144-212 (285)
398 1meo_A Phosophoribosylglycinam 24.0 2.2E+02 0.0074 21.0 7.6 36 148-183 43-86 (209)
399 3iup_A Putative NADPH:quinone 23.9 1.1E+02 0.0037 24.6 5.0 37 146-183 187-223 (379)
400 3glc_A Aldolase LSRF; TIM barr 23.8 1.2E+02 0.0039 24.0 4.9 38 168-205 130-173 (295)
401 3sgz_A Hydroxyacid oxidase 2; 23.8 2.9E+02 0.0099 22.3 10.4 90 94-187 204-305 (352)
402 3tb6_A Arabinose metabolism tr 23.7 1.8E+02 0.0061 21.6 6.1 58 146-207 157-228 (298)
403 3rjz_A N-type ATP pyrophosphat 23.5 64 0.0022 24.6 3.3 37 147-183 108-146 (237)
404 3kcq_A Phosphoribosylglycinami 23.4 1.3E+02 0.0046 22.3 5.0 36 148-183 51-89 (215)
405 1a3w_A Pyruvate kinase; allost 23.3 1E+02 0.0035 26.3 4.8 58 143-200 279-356 (500)
406 3md9_A Hemin-binding periplasm 23.3 1.6E+02 0.0056 21.7 5.7 66 130-197 57-123 (255)
407 1qwg_A PSL synthase;, (2R)-pho 23.3 2.6E+02 0.0087 21.5 7.6 56 129-184 95-169 (251)
408 4drs_A Pyruvate kinase; glycol 23.2 1.5E+02 0.0053 25.4 5.9 59 142-200 308-386 (526)
409 2hqr_A Putative transcriptiona 23.2 2E+02 0.007 20.4 6.6 41 155-195 68-112 (223)
410 3tqv_A Nicotinate-nucleotide p 23.1 2.7E+02 0.0093 21.8 8.7 81 97-183 187-270 (287)
411 3h5o_A Transcriptional regulat 23.1 1.7E+02 0.0058 22.6 5.9 15 72-86 34-48 (339)
412 3lop_A Substrate binding perip 23.1 2.3E+02 0.008 21.9 6.8 52 145-196 159-217 (364)
413 1r3s_A URO-D, uroporphyrinogen 23.0 1.1E+02 0.0039 24.5 4.9 63 131-193 209-293 (367)
414 2h6r_A Triosephosphate isomera 22.9 2.3E+02 0.0079 20.8 8.5 37 147-183 160-199 (219)
415 3snr_A Extracellular ligand-bi 22.9 2.6E+02 0.0088 21.4 7.2 59 145-207 153-218 (362)
416 2qxy_A Response regulator; reg 22.9 1.6E+02 0.0054 19.0 6.1 48 147-194 65-117 (142)
417 3gem_A Short chain dehydrogena 22.9 2.3E+02 0.0077 21.2 6.4 23 151-173 68-90 (260)
418 2iks_A DNA-binding transcripti 22.8 1.8E+02 0.0063 21.7 6.0 8 109-116 21-28 (293)
419 3eqz_A Response regulator; str 22.7 1.5E+02 0.0052 18.7 6.0 50 146-195 63-122 (135)
420 3dmp_A Uracil phosphoribosyltr 22.7 1.7E+02 0.0057 21.9 5.4 40 72-111 143-186 (217)
421 3qe9_Y Exonuclease 1; exonucle 22.6 1.2E+02 0.0042 24.4 5.0 44 145-188 131-175 (352)
422 3gg8_A Pyruvate kinase; malari 22.6 2.2E+02 0.0075 24.4 6.7 57 142-198 293-369 (511)
423 2h0a_A TTHA0807, transcription 22.6 2.3E+02 0.0079 20.7 7.5 57 147-207 141-207 (276)
424 1mkz_A Molybdenum cofactor bio 22.6 1.5E+02 0.0052 20.9 5.1 38 145-182 31-75 (172)
425 1olt_A Oxygen-independent copr 22.5 99 0.0034 25.7 4.6 55 43-103 122-183 (457)
426 3gv0_A Transcriptional regulat 22.5 2.4E+02 0.0083 20.9 6.8 59 146-208 148-216 (288)
427 3brq_A HTH-type transcriptiona 22.5 1.8E+02 0.0062 21.5 5.9 9 108-116 19-27 (296)
428 3fpc_A NADP-dependent alcohol 22.4 1.4E+02 0.0048 23.5 5.4 37 146-183 181-218 (352)
429 1jkx_A GART;, phosphoribosylgl 22.4 1.7E+02 0.0059 21.6 5.5 37 147-183 42-86 (212)
430 3gg7_A Uncharacterized metallo 22.4 1.2E+02 0.004 23.2 4.6 143 42-194 14-185 (254)
431 1ijb_A VON willebrand factor; 22.3 2.1E+02 0.0073 20.3 6.6 55 146-200 137-197 (202)
432 2xn2_A Alpha-galactosidase; hy 22.3 1.7E+02 0.0058 26.2 6.2 18 145-162 399-416 (732)
433 1zy9_A Alpha-galactosidase; TM 22.2 1.8E+02 0.0062 25.1 6.2 18 145-162 253-270 (564)
434 3gnn_A Nicotinate-nucleotide p 22.2 2.9E+02 0.0099 21.7 7.0 80 97-182 198-280 (298)
435 3iwp_A Copper homeostasis prot 22.2 2.9E+02 0.0098 21.7 8.0 118 57-183 39-186 (287)
436 3bbl_A Regulatory protein of L 22.1 2.4E+02 0.0081 21.0 6.5 15 72-86 25-39 (287)
437 1p2f_A Response regulator; DRR 22.1 2.1E+02 0.0073 20.2 6.6 50 146-195 60-114 (220)
438 3hgj_A Chromate reductase; TIM 22.1 3E+02 0.01 21.9 11.4 99 97-195 207-335 (349)
439 1nvm_A HOA, 4-hydroxy-2-oxoval 22.0 61 0.0021 26.0 3.1 15 144-158 95-109 (345)
440 1kgs_A DRRD, DNA binding respo 22.0 2.2E+02 0.0074 20.2 6.4 49 146-194 63-116 (225)
441 3kke_A LACI family transcripti 22.0 2.6E+02 0.0088 21.0 7.5 59 146-208 152-225 (303)
442 3da8_A Probable 5'-phosphoribo 21.9 94 0.0032 23.2 3.9 37 147-183 52-96 (215)
443 3ewi_A N-acylneuraminate cytid 21.9 91 0.0031 22.0 3.7 49 145-195 42-95 (168)
444 3vus_A Poly-beta-1,6-N-acetyl- 21.8 2.7E+02 0.0092 21.2 13.1 31 134-164 205-235 (268)
445 1u3d_A Cryptochrome 1 apoprote 21.8 2.1E+02 0.0072 24.2 6.5 58 146-204 69-131 (509)
446 1pyf_A IOLS protein; beta-alph 21.7 2.7E+02 0.0092 21.5 6.8 32 132-163 170-205 (312)
447 1dxe_A 2-dehydro-3-deoxy-galac 21.7 1.4E+02 0.0049 22.6 5.0 36 147-183 10-47 (256)
448 4e7p_A Response regulator; DNA 21.7 1.8E+02 0.0061 19.1 12.8 49 146-194 83-136 (150)
449 3bil_A Probable LACI-family tr 21.6 2.7E+02 0.0092 21.6 6.9 34 149-182 90-128 (348)
450 1vd6_A Glycerophosphoryl diest 21.5 55 0.0019 24.3 2.5 21 163-183 22-42 (224)
451 3g85_A Transcriptional regulat 21.4 2.5E+02 0.0086 20.7 7.5 59 146-208 148-216 (289)
452 3fy4_A 6-4 photolyase; DNA rep 21.4 1.9E+02 0.0065 24.8 6.2 59 146-205 72-134 (537)
453 3rlg_A Sphingomyelin phosphodi 21.3 58 0.002 25.9 2.7 22 162-183 35-56 (302)
454 1o1z_A GDPD, glycerophosphodie 21.3 55 0.0019 24.5 2.5 20 164-183 28-47 (234)
455 3t6k_A Response regulator rece 21.2 1.7E+02 0.0059 18.8 7.0 49 146-194 65-120 (136)
456 1byk_A Protein (trehalose oper 21.2 1.6E+02 0.0054 21.5 5.2 11 147-157 50-60 (255)
457 2qv0_A Protein MRKE; structura 21.1 1.7E+02 0.0059 18.8 5.2 49 146-195 72-124 (143)
458 3iv8_A N-acetylglucosamine-6-p 21.1 1.5E+02 0.0052 24.1 5.3 38 144-181 177-215 (381)
459 2fep_A Catabolite control prot 21.1 2.6E+02 0.0089 20.8 7.1 17 145-161 85-101 (289)
460 1p0k_A Isopentenyl-diphosphate 21.1 3.1E+02 0.011 21.6 12.3 43 146-188 240-285 (349)
461 1qap_A Quinolinic acid phospho 21.1 1.1E+02 0.0038 24.1 4.3 36 157-193 210-247 (296)
462 3av3_A Phosphoribosylglycinami 21.1 1.7E+02 0.0057 21.6 5.2 38 146-183 44-89 (212)
463 2yzr_A Pyridoxal biosynthesis 21.1 1.8E+02 0.0061 23.4 5.5 49 146-194 230-289 (330)
464 2d00_A V-type ATP synthase sub 21.1 1.7E+02 0.0058 19.1 4.7 51 144-196 11-68 (109)
465 1y5e_A Molybdenum cofactor bio 21.1 1.3E+02 0.0044 21.2 4.4 38 145-182 34-78 (169)
466 3h75_A Periplasmic sugar-bindi 21.0 2.4E+02 0.0082 21.8 6.5 38 146-183 25-69 (350)
467 3cg0_A Response regulator rece 21.0 1.7E+02 0.0058 18.6 7.1 48 147-194 73-124 (140)
468 3bbl_A Regulatory protein of L 21.0 2.6E+02 0.0089 20.7 7.8 58 146-207 146-215 (287)
469 3ocu_A Lipoprotein E; hydrolas 21.0 53 0.0018 25.4 2.4 35 145-179 107-146 (262)
470 1dbw_A Transcriptional regulat 21.0 1.6E+02 0.0056 18.4 7.5 49 146-194 64-117 (126)
471 2is8_A Molybdopterin biosynthe 20.9 1.3E+02 0.0045 21.1 4.4 38 145-182 24-68 (164)
472 3gyb_A Transcriptional regulat 20.9 1.1E+02 0.0037 22.8 4.2 14 147-160 52-65 (280)
473 3eod_A Protein HNR; response r 20.8 1.7E+02 0.0057 18.5 5.9 49 146-194 68-122 (130)
474 3n58_A Adenosylhomocysteinase; 20.8 2E+02 0.0068 24.3 5.9 61 129-189 66-136 (464)
475 3gyb_A Transcriptional regulat 20.8 2.6E+02 0.0088 20.6 6.9 58 146-207 137-203 (280)
476 3iar_A Adenosine deaminase; pu 20.7 3.4E+02 0.011 21.9 14.5 61 144-204 242-314 (367)
477 2zv3_A PTH, peptidyl-tRNA hydr 20.7 1.7E+02 0.0059 19.3 4.7 40 144-183 37-81 (115)
478 1bd0_A Alanine racemase; isome 20.7 3.3E+02 0.011 21.9 7.5 26 144-172 89-114 (388)
479 2iw0_A Chitin deacetylase; hyd 20.6 54 0.0018 25.0 2.4 92 72-165 54-170 (254)
480 3k4h_A Putative transcriptiona 20.6 2.5E+02 0.0084 20.8 6.3 37 168-204 122-162 (292)
481 3cc1_A BH1870 protein, putativ 20.6 1.6E+02 0.0054 24.4 5.4 18 145-162 97-114 (433)
482 2v5j_A 2,4-dihydroxyhept-2-ENE 20.5 1.8E+02 0.0061 22.6 5.4 36 147-183 30-67 (287)
483 3h9u_A Adenosylhomocysteinase; 20.4 2.4E+02 0.0084 23.5 6.4 61 129-189 64-135 (436)
484 3ib6_A Uncharacterized protein 20.4 2.2E+02 0.0076 19.8 7.7 51 145-195 40-110 (189)
485 3qz6_A HPCH/HPAI aldolase; str 20.4 1.2E+02 0.0042 23.2 4.4 35 149-183 8-44 (261)
486 3o1i_D Periplasmic protein TOR 20.3 97 0.0033 23.3 3.9 8 109-116 6-13 (304)
487 2fn9_A Ribose ABC transporter, 20.3 2.2E+02 0.0076 21.1 6.0 14 169-182 51-64 (290)
488 1o66_A 3-methyl-2-oxobutanoate 20.3 1.8E+02 0.0063 22.6 5.4 36 147-182 8-43 (275)
489 1rlk_A Hypothetical protein TA 20.3 2E+02 0.0067 19.1 5.2 40 144-183 39-83 (117)
490 3td9_A Branched chain amino ac 20.3 3E+02 0.01 21.2 8.4 52 145-196 168-225 (366)
491 2g2c_A Putative molybdenum cof 20.2 1.1E+02 0.0037 21.6 3.8 38 145-182 28-75 (167)
492 4eze_A Haloacid dehalogenase-l 20.2 1.4E+02 0.0049 23.3 4.9 38 145-182 185-223 (317)
493 2ywr_A Phosphoribosylglycinami 20.1 1.3E+02 0.0044 22.3 4.4 37 147-183 43-87 (216)
494 1qap_A Quinolinic acid phospho 20.1 3.2E+02 0.011 21.4 10.7 81 97-183 197-280 (296)
No 1
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=2e-40 Score=264.83 Aligned_cols=188 Identities=16% Similarity=0.293 Sum_probs=164.0
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhc---------ccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchh
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQ---------KSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKG 72 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~---------~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~ 72 (208)
||++||+||++++|+|| |.|.|.++||+||+. .+.+++||||+|+|+++++..+.++||||.....+ ..
T Consensus 52 DG~lVv~HD~~l~Rtt~-~~g~v~~~t~~eL~~l~~~~~~~~~~~~~~iPtL~evL~~~~~~~~~l~iEiK~~~~~~-~~ 129 (252)
T 2pz0_A 52 DGHLVVIHDETVDRTTN-GEGFVKDFTLEEIKKLDAGIKFGEKFAGERIPTLYEVFELIGDKDFLVNIEIKSGIVLY-PG 129 (252)
T ss_dssp TCCEEECSSSBSTTTSS-CCSBGGGSCHHHHTTSCSSTTTCGGGTTCCCCBHHHHHHHHTTSCCEEEEEECCSSCCC-TT
T ss_pred CCeEEEEcCCcccccCC-CCcchhhCcHHHHhhcCCCCCCCCCCCCCcCCCHHHHHHHhhhcCCeEEEEeCCCCccc-HH
Confidence 99999999999999995 579999999999964 23678999999999999875579999999875433 36
Q ss_pred HHHHHHHHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHH
Q 028497 73 LAKDILSVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTF 151 (208)
Q Consensus 73 ~~~~v~~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 151 (208)
+++.++++++++++. +++++||++..+++++++.|++++|+++...+.. +..+.+..+++++++.+..+++++++.+
T Consensus 130 ~~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~v~~~ 207 (252)
T 2pz0_A 130 IEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVE--PWHMALRMEAYSLHPFYFNIIPELVEGC 207 (252)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSS--THHHHHHTTCSEEEEBGGGCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCcccc--HHHHHHHcCCeEEecchhcCCHHHHHHH
Confidence 889999999999975 5567999999999999999999999998643322 2344566788889999999999999999
Q ss_pred HhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 152 HGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 152 ~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
|++|++|++||+|+++++++++++|||||+||+|..+.++++
T Consensus 208 ~~~G~~v~~wTvn~~~~~~~l~~~GvdgIiTD~P~~~~~~l~ 249 (252)
T 2pz0_A 208 KKNGVKLFPWTVDRKEDMERMIKAGVDGIITDDPETLINLVR 249 (252)
T ss_dssp HHTTCEECCBCCCSHHHHHHHHHHTCSEEEESCHHHHHHHHC
T ss_pred HHCCCEEEEECCCCHHHHHHHHHcCCCEEEcCCHHHHHHHHh
Confidence 999999999999999999999999999999999999998875
No 2
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=2.3e-40 Score=264.47 Aligned_cols=190 Identities=17% Similarity=0.179 Sum_probs=163.4
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhc---------ccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchh
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQ---------KSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKG 72 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~---------~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~ 72 (208)
||++||+||++++|+|| +.+.|+++||+||+. .+.+++||||+|+|+.+++..+.++||||..... ...
T Consensus 50 Dg~~Vv~HD~~l~r~t~-~~~~v~~~t~~el~~l~~~~~~~~~~~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~-~~~ 127 (252)
T 3qvq_A 50 DGIPVIFHDDYLSRTTD-GDGLIYKTPLAELKQLDAGSWKGQEYQQETIPTLLEAIEVISQYGMGLNLELKPCEGL-EEE 127 (252)
T ss_dssp TSCEEECCCSBSTTTSS-CCSBGGGSCHHHHTTSCSSTTTCGGGTTCCCCBHHHHHHHHHHTTCEEEEEECCCTTC-HHH
T ss_pred CCcEEEECCCccccccC-CCceeecCcHHHHhcCCCCCccCccCCCCcCcCHHHHHHHHhccCcEEEEEecCCCCc-cHH
Confidence 99999999999999995 579999999999964 2457899999999999986557999999975422 235
Q ss_pred HHHHHHHHHHhcCCc--ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHH
Q 028497 73 LAKDILSVIERTKCY--NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRT 150 (208)
Q Consensus 73 ~~~~v~~~l~~~~~~--~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 150 (208)
+++.+.+++++++.. +++++||++..+++++++.|++++|+++...+.. +..+.+..++..+++.+..+++++++.
T Consensus 128 ~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~v~~ 205 (252)
T 3qvq_A 128 TIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVSAIPSA--WQERLEHLDCAGLHIHQSFFDVQQVSD 205 (252)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCTT--HHHHHHHHTCSEEEEEGGGCCHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCchh--HHHHHHHcCCeEEecchhhCCHHHHHH
Confidence 678888999998763 5678999999999999999999999998643322 234456678888999999999999999
Q ss_pred HHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHH
Q 028497 151 FHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 151 ~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~ 195 (208)
+|++|++|++||||+++++++++++|||||+||+|..+++++++.
T Consensus 206 ~~~~G~~v~~WTvn~~~~~~~l~~~GVdgIiTD~P~~~~~~l~~~ 250 (252)
T 3qvq_A 206 IKAAGYKVLAFTINDESLALKLYNQGLDAVFSDYPQKIQSAIDSH 250 (252)
T ss_dssp HHHTTCEEEEECCCCHHHHHHHHHTTCCEEEESSHHHHHHHHHHC
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998754
No 3
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=2.6e-39 Score=258.07 Aligned_cols=195 Identities=12% Similarity=0.101 Sum_probs=163.3
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhccc----CCCcCCCHHHHHHHHhcCCceEEEEeecCCCCC-chhHHHH
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQKS----HDQVITTIEDALTLVSNSVRKVILDAKVGPPSY-EKGLAKD 76 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~~~----~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~-~~~~~~~ 76 (208)
||++||+||++++|+|| +.|.|.++||+||+..- .+++||||+|+|+++++..+.++||||...... ...+++.
T Consensus 43 Dg~~Vv~HD~~l~r~t~-~~g~v~~~t~~el~~l~~~~~~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 121 (250)
T 3ks6_A 43 DGAIVVHHDPTLDATTD-MTGAIVDMTLAKVKTATIRYGAGSHPMTLEELCALYVDSHVNFRCEIKPGVDGLPYEGFVAL 121 (250)
T ss_dssp TSCEEECSSSBSTTTBS-CCSBGGGSCHHHHHHCCBTTSTTCCCEEHHHHHHHHTTCSCEEEEEECCCTTSCCCTTHHHH
T ss_pred CCCEEEECCCccccccC-CCCeeecCcHHHHhcCCCCCCCCccCcCHHHHHHHHhccCcEEEEEeCCCcccCcchHHHHH
Confidence 99999999999999995 57999999999998622 468999999999999854579999999853211 1378899
Q ss_pred HHHHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCch---hhhHhhhhcCceEeecccccCHHHHHHHH
Q 028497 77 ILSVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGF---RTNLLRIRKAGVVGVYHPLIDEKLVRTFH 152 (208)
Q Consensus 77 v~~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 152 (208)
++++++++++. +++++||++..+++++++.|+++++++......... +....+..+++++++.+..+++++++.+|
T Consensus 122 v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 201 (250)
T 3ks6_A 122 VIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGLMAQVQ 201 (250)
T ss_dssp HHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCCHHHHHHHH
Confidence 99999999975 567899999999999999999999876531100000 11233557888899999999999999999
Q ss_pred hCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHHHh
Q 028497 153 GRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQDIRT 197 (208)
Q Consensus 153 ~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~ 197 (208)
++|++|++||||+++++++++++|||||+||+|..+++++++.+.
T Consensus 202 ~~G~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 202 AAGLDFGCWAAHTPSQITKALDLGVKVFTTDRPTLAIALRTEHRM 246 (250)
T ss_dssp HTTCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHHHHHHHHHH
T ss_pred HCCCEEEEEeCCCHHHHHHHHHcCCCEEEcCCHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999987653
No 4
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=1.3e-39 Score=259.51 Aligned_cols=188 Identities=11% Similarity=0.088 Sum_probs=160.1
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhc---------ccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchh
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQ---------KSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKG 72 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~---------~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~ 72 (208)
||++||+||++++|+|| |.|.|+++||+||+. .+.+++||||+|+|+++++..+.++||+|..... ...
T Consensus 47 Dg~lVv~HD~~l~R~t~-~~g~v~~~t~~eL~~l~~g~~~~~~~~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~-~~~ 124 (247)
T 2otd_A 47 DGEIFLLHDDNLERTSN-GWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLLSQVAERCREHGMMANIEIKPTTGT-GPL 124 (247)
T ss_dssp TCCEEECSSSBSSTTSS-CCSBGGGSCHHHHTTCCSSTTTCGGGTTCCCCBHHHHHHHHHHTTCEEEEEECCCTTC-HHH
T ss_pred CCcEEEECCCCccccCC-CCccHhhCcHHHHhhCCCCCccCCCCCCCcCCCHHHHHHHHHhcCCEEEEEECCCCCc-chH
Confidence 99999999999999995 579999999999964 2467999999999999985457899999986532 124
Q ss_pred HHHHHHHHHHhc--CCcceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHH
Q 028497 73 LAKDILSVIERT--KCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRT 150 (208)
Q Consensus 73 ~~~~v~~~l~~~--~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 150 (208)
+++.++++++++ ++.+++++||++..+++++++.|++++|+++...+. .+..+.+..+++++++++..+++++++.
T Consensus 125 ~~~~v~~~l~~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~v~~ 202 (247)
T 2otd_A 125 TGKMVALAARQLWAGMTPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRD--DWRELTARLGCVSIHLNHKLLDKARVMQ 202 (247)
T ss_dssp HHHHHHHHHHHHTTTSCCCEEEESCHHHHHHHHHHCTTSCEEEEESSCCT--THHHHHHHHTCSEEEEEGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHhcCcCCEEEEcCCHHHHHHHHHHCCCCCEEEEecCCcc--cHHHHHHHcCCeEEecChHhCCHHHHHH
Confidence 677899999887 455667899999999999999999999999864332 2234456678888999899999999999
Q ss_pred HHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 151 FHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 151 ~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
+|++|++|++||+|+++++++++++|||||+||+|..+.++++
T Consensus 203 ~~~~G~~v~~wTvn~~~~~~~l~~~GvdgI~TD~p~~~~~~l~ 245 (247)
T 2otd_A 203 LKDAGLRILVYTVNKPQHAAELLRWGVDCICTDAIDVIGPNFT 245 (247)
T ss_dssp HHHTTCEEEEECCCCHHHHHHHHHHTCSEEEESCTTTSCTTCC
T ss_pred HHHCCCEEEEEccCCHHHHHHHHHcCCCEEEeCCHHHHHHHHh
Confidence 9999999999999999999999999999999999998876543
No 5
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=2.4e-38 Score=253.70 Aligned_cols=188 Identities=18% Similarity=0.250 Sum_probs=161.7
Q ss_pred CceEEEEeCc---cchhhhCCCcccccccCHHHhhcc--cCCCcCCCHHHHHHHHhcC--CceEEEEeecCCC--CCchh
Q 028497 2 ESCWLFTTGR---DLQRISGNITSKVGHLSMKEFAQK--SHDQVITTIEDALTLVSNS--VRKVILDAKVGPP--SYEKG 72 (208)
Q Consensus 2 Dg~~Vv~HD~---~l~r~tg~g~~~i~~~t~~eL~~~--~~~~~iptL~evL~~~~~~--~~~l~lEiK~~~~--~~~~~ 72 (208)
||++||+||+ +++|+|| |.|.|.++||+||+.. ..+++||||+|+|+++++. .+.++||+|.... .+ ..
T Consensus 49 Dg~lVv~HD~~~~~l~Rtt~-~~g~v~~~t~~eL~~l~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~-~~ 126 (258)
T 2o55_A 49 TGEIVLFHGTPEGTIPFYKD-GTSRIGDLSLEELKRLDVGGGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKRKE-SG 126 (258)
T ss_dssp TSCEEECCCSTTSBCTTSTT-TTCBGGGSCHHHHTTCBSSSSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSSTT-SS
T ss_pred CCeEEEEeCCCCccceeeCC-CCeehhhCcHHHHhhcCCCCCCccCCHHHHHHHhhhhcCceEEEEEEccCCccccc-hH
Confidence 9999999999 9999995 5799999999999863 3579999999999999875 5799999998642 22 36
Q ss_pred HHHHHHHHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEE-EecCCCchhhhH---hhhhcCceEeecccccCHHH
Q 028497 73 LAKDILSVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYII-MVDPSTGFRTNL---LRIRKAGVVGVYHPLIDEKL 147 (208)
Q Consensus 73 ~~~~v~~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 147 (208)
+++.++++++++++. +++|+||++..+++++++.|++++|+++ ...+... ..+ .+..+++++++.+..+++++
T Consensus 127 ~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~ 204 (258)
T 2o55_A 127 DHQRLLLLVEKYHMQERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTP--LDFVEQACYGDANGVSMLFHYLTKEQ 204 (258)
T ss_dssp HHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCC--TTHHHHHHHTTCSEEEEEGGGCCHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCH--HHHHHHHHhcCCeEEecChhhcCHHH
Confidence 889999999999975 5577999999999999999999999988 3222111 123 45578888999999999999
Q ss_pred HHHHHhCCCeEEEeeC----CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 148 VRTFHGRNKRVFAWTV----DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv----~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
++.+|++|++|++||+ |+++++++++++|||||+||+|..+.++++
T Consensus 205 v~~~~~~G~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~TD~p~~~~~~l~ 254 (258)
T 2o55_A 205 VCTAHEKGLSVTVWMPWIFDDSEEDWKKCLELQVDLICSNYPFGLMNFLS 254 (258)
T ss_dssp HHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHTCSEEEESCHHHHHHHHT
T ss_pred HHHHHHCCCEEEEeeCCCCCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999988775
No 6
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=4.4e-38 Score=258.64 Aligned_cols=192 Identities=17% Similarity=0.252 Sum_probs=160.0
Q ss_pred CceEEEEeCccchhhh---CCCc------ccccccCHHHhhcc--c------------------CCCcCCCHHHHHHHHh
Q 028497 2 ESCWLFTTGRDLQRIS---GNIT------SKVGHLSMKEFAQK--S------------------HDQVITTIEDALTLVS 52 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~t---g~g~------~~i~~~t~~eL~~~--~------------------~~~~iptL~evL~~~~ 52 (208)
||++||+||++|+|+| ++|. +.|+++||+||+.. . .+++||||+|+|++++
T Consensus 58 Dg~~Vv~HD~~l~rtt~~~~~G~~~~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~g~~iptL~evl~~~~ 137 (313)
T 3l12_A 58 DGVPVVTHNHHLANAMTRDGQGHWLTGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTGIHVPRLGELLDLCA 137 (313)
T ss_dssp TSCEEECSSSBCCTTTCBCTTSCBCCSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHHSTTSCCCSSCCCCBHHHHHHHHH
T ss_pred CCCEEEECCchhcccccccCCCcccCCCCcchhcCcHHHHhhCCCCCccccccccccCccccccCCCcCCCHHHHHHHHH
Confidence 9999999999999985 1332 58999999999741 1 2589999999999998
Q ss_pred cC---CceEEEEeecCCCCCc-----hhHHHHHHHHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCC--
Q 028497 53 NS---VRKVILDAKVGPPSYE-----KGLAKDILSVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPST-- 121 (208)
Q Consensus 53 ~~---~~~l~lEiK~~~~~~~-----~~~~~~v~~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~-- 121 (208)
+. .+.++||||.....+. ..+++.++++++++++. +++++||++..+++++++.|+++++++....+..
T Consensus 138 ~~~~~~~~l~IEiK~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~ 217 (313)
T 3l12_A 138 GYGDQAPYLLLELKSDPALMHDHAARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADD 217 (313)
T ss_dssp TTGGGCCEEEEEECCCGGGTTCHHHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC----
T ss_pred hcCCCCceEEEEEccCCccccccccHHHHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCCCCcEEEEecccccccc
Confidence 73 4699999998743221 26788999999999985 5677999999999999999999999998643210
Q ss_pred -----------------chhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 122 -----------------GFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 122 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
.......+..+++++++++..+++++++.+|++|++|++||||+++++++++++||||||||+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTVn~~~~~~~l~~~GVDgIiTD~ 297 (313)
T 3l12_A 218 PGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDVTPELVAEAHDLGLIVLTWTVNEPEDIRRMATTGVDGIVTDY 297 (313)
T ss_dssp ---------CCCTTTCCSCHHHHHHHHTCSEEEEBGGGCCHHHHHHHHHTTCEEEEBCCCSHHHHHHHHHHTCSEEEESC
T ss_pred ccccccccccccchhccccHHHHHHHhCCcEEecchhcCCHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCC
Confidence 000223345778999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 028497 185 PILFQRVMQ 193 (208)
Q Consensus 185 P~~~~~~~~ 193 (208)
|+.++++++
T Consensus 298 P~~~~~~l~ 306 (313)
T 3l12_A 298 PGRTQRILI 306 (313)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999987
No 7
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=1.6e-37 Score=252.44 Aligned_cols=189 Identities=16% Similarity=0.212 Sum_probs=157.2
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhc-----------------ccCCCcCCCHHHHHHHHhcCCceEEEEeec
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQ-----------------KSHDQVITTIEDALTLVSNSVRKVILDAKV 64 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~-----------------~~~~~~iptL~evL~~~~~~~~~l~lEiK~ 64 (208)
||++||+||++|+|+|| |.|.|+++||+||+. .+.+++||||+|+|+.+++. +.++||||.
T Consensus 65 DG~lVv~HD~~l~Rtt~-~~g~v~d~T~~eL~~l~~~~~f~~~~p~~~~~~~~~~~iPtL~evL~~~~~~-~~l~IEiK~ 142 (287)
T 2oog_A 65 DGHLVAMHDETVNRTTN-GHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPN-ANYYIETKS 142 (287)
T ss_dssp TCCEEECSSSBSTTTSS-CCSBGGGSCHHHHTTSCSSHHHHHHCGGGCCGGGTTCCCCBHHHHHHHHCTT-SCEEEECCC
T ss_pred CCcEEEECCChhcccCC-CCeehhhCcHHHHHhcCCCcccCccCccccccccCCccCCCHHHHHHhhCcC-ceEEEEECC
Confidence 99999999999999995 579999999999963 13578999999999999764 689999998
Q ss_pred CCCCCchhHHHHHHHHHHhcCC-------c-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCC-chhhhHhhh-hcCc
Q 028497 65 GPPSYEKGLAKDILSVIERTKC-------Y-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPST-GFRTNLLRI-RKAG 134 (208)
Q Consensus 65 ~~~~~~~~~~~~v~~~l~~~~~-------~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~-~~~~~~~~~-~~~~ 134 (208)
... + ..+++.++++++++++ . +++|+||++..+++++++.|++++++++...... .....+... ..+.
T Consensus 143 ~~~-~-~~~~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 220 (287)
T 2oog_A 143 PDV-Y-PGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAI 220 (287)
T ss_dssp TTT-S-TTHHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCS
T ss_pred CCC-c-chHHHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhhe
Confidence 532 2 3678899999999987 4 4577999999999999999999999998632111 001122111 2356
Q ss_pred eEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHH
Q 028497 135 VVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQD 194 (208)
Q Consensus 135 ~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~ 194 (208)
.+++.+..+++++++.+|++|++|++||+|+++++++++++||||||||+|..+.+++++
T Consensus 221 ~v~~~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~~~l~~~GVdgIiTD~P~~~~~~~~~ 280 (287)
T 2oog_A 221 GLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIKE 280 (287)
T ss_dssp EEEEBGGGCCHHHHHHHHHTTCEECCBCCCSHHHHHHHHHHTCSEEEESCHHHHHHHHHC
T ss_pred EEcccHhhcCHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHhc
Confidence 677888889999999999999999999999999999999999999999999999988874
No 8
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=1.9e-39 Score=258.69 Aligned_cols=188 Identities=11% Similarity=0.134 Sum_probs=161.5
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhcc--cCCCcCCCHHHHHHHHhcCCceEEEEeecCCC-CCchhHHHHHH
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQK--SHDQVITTIEDALTLVSNSVRKVILDAKVGPP-SYEKGLAKDIL 78 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~~--~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~-~~~~~~~~~v~ 78 (208)
||++||+||++++|+|| |.|.|+++||+||+.. ..+++||||+|+|+++++..+.++||+|.... .+ .+++.++
T Consensus 42 Dg~lVv~HD~~l~Rtt~-~~g~v~~~t~~eL~~l~~g~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~--~~~~~v~ 118 (248)
T 1zcc_A 42 DGVLYVIHDETLDRTTN-GTGPVGHMLSSEIDTLDAGGWFDDRFKGAIVPRLDAYLEHLRGRAGVYIELKY--CDPAKVA 118 (248)
T ss_dssp TCCEEECSSSBTTTTSS-CCSBSTTSCHHHHTTSCSSTTTCGGGTTCCCCBHHHHHHHHTTTCEEEEEEEE--SCHHHHH
T ss_pred CCCEEEECCCccccccC-CCcchhhCCHHHHHhCCCCCCCCCCCHHHHHHHHHhcCcEEEEEeCCCCCccc--HHHHHHH
Confidence 99999999999999995 5799999999999863 34569999999999998744689999998642 12 2678999
Q ss_pred HHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeeccccc-CHHHHHHHHhCCC
Q 028497 79 SVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLI-DEKLVRTFHGRNK 156 (208)
Q Consensus 79 ~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~g~ 156 (208)
++++++++. +++|+||++..+++++++.|++++|+++...+. +..+.+..+++++++.+..+ ++++++.+|++|+
T Consensus 119 ~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~G~ 195 (248)
T 1zcc_A 119 ALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS---PSLVGAVHHASIIEITPAQMRRPGIIEASRKAGL 195 (248)
T ss_dssp HHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS---THHHHHTTCCSEEEECHHHHHSHHHHHHHHHHTC
T ss_pred HHHHHhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCcc---HHHHHHHcCCCEEEecHHHhCCHHHHHHHHHCCC
Confidence 999999975 567799999999999999999999998754321 23455667888899988888 9999999999999
Q ss_pred eEEEeeCCCHHHHHH-HHhCCCCEEEcCChHHHHHHHHHH
Q 028497 157 RVFAWTVDDEDSMRK-MLHERVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 157 ~v~~wtv~~~~~~~~-~~~~gvd~i~TD~P~~~~~~~~~~ 195 (208)
+|++||+|+++++++ ++++|||||+||+|..+++++++.
T Consensus 196 ~v~~wTvn~~~~~~~~l~~~GvdgIiTD~p~~~~~~~~~~ 235 (248)
T 1zcc_A 196 EIMVYYGGDDMAVHREIATSDVDYINLDRPDLFAAVRSGM 235 (248)
T ss_dssp EEEEECCCCCHHHHHHHHHSSCSEEEESCHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHcCCCEEEECCHHHHHHHHHHh
Confidence 999999999999999 999999999999999999888743
No 9
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=9.2e-37 Score=241.67 Aligned_cols=183 Identities=16% Similarity=0.177 Sum_probs=153.8
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhcc--cCCCcCCCHHHHHHHHhcC-CceEEEEeecCCCCC-chhHHHHH
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQK--SHDQVITTIEDALTLVSNS-VRKVILDAKVGPPSY-EKGLAKDI 77 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~~--~~~~~iptL~evL~~~~~~-~~~l~lEiK~~~~~~-~~~~~~~v 77 (208)
||++||+||++++| +.|+++||+||+.. ..+++||||+|+|+++++. .+.++||||...... ...+++.+
T Consensus 47 Dg~~Vv~HD~~l~~------~~v~~~t~~el~~l~~~~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v 120 (238)
T 3no3_A 47 DNVLVVYHDNDIQG------KHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLS 120 (238)
T ss_dssp TSCEEECSSSEETT------EEGGGSCHHHHTTCBCTTSCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCC------CChHhCCHHHHhhCCCCCCCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcchhHHHHHHH
Confidence 99999999999985 68999999999863 4579999999999999875 479999999865210 12578899
Q ss_pred HHHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccc--cCHHHHHHHHhC
Q 028497 78 LSVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPL--IDEKLVRTFHGR 154 (208)
Q Consensus 78 ~~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~ 154 (208)
+++++++++. +++++||++..+++++++.|+++++++....+ ....+..+++.+.+++.. .++++++.+|++
T Consensus 121 ~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (238)
T 3no3_A 121 VQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELS-----PMELKELGFTGLDYHYKVLQSHPDWVKDCKVL 195 (238)
T ss_dssp HHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSC-----HHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHT
T ss_pred HHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCC-----HHHHHHCCCceEeccHHhhhCCHHHHHHHHHC
Confidence 9999999985 56779999999999999999999998874321 122344677777666543 478999999999
Q ss_pred CCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHH
Q 028497 155 NKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 155 g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~ 195 (208)
|++|++||||+++++++++++|||||+||+|..+++++++.
T Consensus 196 G~~v~~WTVn~~~~~~~l~~~GVdgIiTD~P~~~~~~l~~r 236 (238)
T 3no3_A 196 GMTSNVWTVDDPKLMEEMIDMGVDFITTDLPEETQKILHSR 236 (238)
T ss_dssp TCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHcCCCEEECCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998753
No 10
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2.9e-36 Score=243.25 Aligned_cols=184 Identities=11% Similarity=0.127 Sum_probs=151.4
Q ss_pred CceEEEEeCccchh----hhCCCc---------ccccccCHHHhhcc---------cCC-----CcCCCHHHHHHHHhcC
Q 028497 2 ESCWLFTTGRDLQR----ISGNIT---------SKVGHLSMKEFAQK---------SHD-----QVITTIEDALTLVSNS 54 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r----~tg~g~---------~~i~~~t~~eL~~~---------~~~-----~~iptL~evL~~~~~~ 54 (208)
||++||+||++++| +| +|. +.|+++||+||+.. +.+ ++||||+|+|+++++.
T Consensus 49 Dg~lVv~HD~~l~r~~~~tt-~g~~~~~~~~~~~~v~d~t~~eL~~l~~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~ 127 (272)
T 3ch0_A 49 DNRVVVSHDTFFHHEITMMV-DGEDVTEANEKNFNLYAMNYADIKEIDVGMKTHPRFKSQKKVPAVKPLFRELIETAEKL 127 (272)
T ss_dssp TCCEEECSSSBCCTTTCCEE-TTEECCTTTGGGSBGGGSCHHHHTTSCCSSSCCTTCTTSCCCCCCCCBHHHHHHHHHHH
T ss_pred CCcEEEeCCCcccccccccC-CCcccccccccCceeecCCHHHHHhcCCCCccCccCcccccCCCCCcCHHHHHHHHHHh
Confidence 99999999999999 33 443 38999999999742 122 3799999999999862
Q ss_pred --CceEEEEeecCCCC------CchhHHHHHHHHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhh
Q 028497 55 --VRKVILDAKVGPPS------YEKGLAKDILSVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRT 125 (208)
Q Consensus 55 --~~~l~lEiK~~~~~------~~~~~~~~v~~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~ 125 (208)
.+.++||||..... ....+++.++++++++++. +++|+||++..++++++..|+++++++.... . .+.
T Consensus 128 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~-~--~~~ 204 (272)
T 3ch0_A 128 SAKIQYNGEIKSTVEGDNIDHPNIALFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETK-G--TLK 204 (272)
T ss_dssp CSSCEEEEEECCCGGGBTTTBCCHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSEEEEEECSS-C--CHH
T ss_pred CCCceEEEEECCCcCcccccCccHHHHHHHHHHHHHHcCCCCcEEEEeCCHHHHHHHHHHCCCCcEEEEecCC-C--CHH
Confidence 46999999986421 1124788999999999975 4567999999999999999999999998632 1 122
Q ss_pred hHhhhhcC--ceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHH
Q 028497 126 NLLRIRKA--GVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 126 ~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
.+.+..++ +++++++..+++++++.+|++|++|++||+|+++++++++++||||||||+|..++
T Consensus 205 ~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~l~~~GvdgIiTD~P~~~~ 270 (272)
T 3ch0_A 205 KQLEKLSFTPAVYSPDVTLVSKKDIDAAHKLGMRVIPWTVNTKEEIETLISLGVDGIITDYPDLFF 270 (272)
T ss_dssp HHHTTSSSCCSEEEEBGGGCCHHHHHHHHHTTCEECCBCCCSHHHHHHHHHHTCSEEEESCGGGGT
T ss_pred HHHHHcCCCCcEEccchhhcCHHHHHHHHHcCCEEEEeccCCHHHHHHHHHcCCCEEEeCCHHHHh
Confidence 34444555 88888889999999999999999999999999999999999999999999999865
No 11
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=1.6e-36 Score=239.63 Aligned_cols=174 Identities=20% Similarity=0.328 Sum_probs=147.9
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhcccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHH
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQKSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVI 81 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l 81 (208)
||++||+||++++|+|| +.|.|+++||+||+..- +++||||+|+|++++++ ..++||+|.. ..++.+++++
T Consensus 53 DG~lVv~HD~~l~Rtt~-~~g~v~d~T~~eL~~l~-~~~iptL~evL~~~~~~-~~l~iEiK~~------~~~~~v~~~l 123 (234)
T 1o1z_A 53 DGKVVVSHDEDLKRLFG-LDVKIRDATVSELKELT-DGKITTLKEVFENVSDD-KIINIEIKER------EAADAVLEIS 123 (234)
T ss_dssp TSCEEECSSSEEHHHHC-EEEEGGGSCHHHHHHHT-TTCCCBHHHHHHHSCTT-SEEEEEECCG------GGHHHHHHHH
T ss_pred CCCEEEEcCCcHHhcCC-cCcCcccCcHHHHhcCC-CCCCCCHHHHHHhcccC-CeEEEEeCCc------cHHHHHHHHH
Confidence 99999999999999995 57999999999998744 88999999999999886 6899999964 5678899999
Q ss_pred HhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcC---ceEeeccccc--C--HHHHHHHHhC
Q 028497 82 ERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKA---GVVGVYHPLI--D--EKLVRTFHGR 154 (208)
Q Consensus 82 ~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~--~~~v~~~~~~ 154 (208)
++ ..+++++||+ ++++++..|++++|+++...+.. .+..+.+..++ +++++.+..+ + +++++.+|++
T Consensus 124 ~~--~~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~v~~~~~~ 197 (234)
T 1o1z_A 124 KK--RKNLIFSSFD---LDLLDEKFKGTKYGYLIDEENYG-SIENFVERVEKERPYSLHVPYQAFELEYAVEVLRSFRKK 197 (234)
T ss_dssp TT--CCSEEEEESC---HHHHHHHCTTSCEEEECCTTTTC-SHHHHHHHHHHHCCSEEEEEGGGGGSHHHHHHHHHHHHT
T ss_pred hc--cCCEEEEchh---HHHHHhhCCCCcEEEEecccccc-CHHHHHHHcCCCCCCEEEeCHHHhcCCccHHHHHHHHHc
Confidence 88 4466789999 89999999999999998643321 11233333444 7888888877 7 8999999999
Q ss_pred CCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHH
Q 028497 155 NKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRV 191 (208)
Q Consensus 155 g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~ 191 (208)
|++|++||+|+++++++++++ ||||+||+|..++++
T Consensus 198 G~~v~~wTvn~~~~~~~l~~~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 198 GIVIFVWTLNDPEIYRKIRRE-IDGVITDEVELFVKL 233 (234)
T ss_dssp TCEEEEESCCCHHHHHHHGGG-CSEEEESCHHHHHHT
T ss_pred CCEEEEeCCCCHHHHHHHHHh-CCEEEcCCHHHHhhc
Confidence 999999999999999999999 999999999998865
No 12
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=4.9e-36 Score=235.55 Aligned_cols=174 Identities=17% Similarity=0.246 Sum_probs=150.0
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhcccCCCcCCCHHHHHHHHh-cCCceEEEEeecCCCCCchhHHHHHHHH
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQKSHDQVITTIEDALTLVS-NSVRKVILDAKVGPPSYEKGLAKDILSV 80 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~~~~~~~iptL~evL~~~~-~~~~~l~lEiK~~~~~~~~~~~~~v~~~ 80 (208)
||++||+||++++ .|.|+++||+||+..- ++||||+|+|++++ +..+.++||+|.....+ ..+++.++++
T Consensus 48 Dg~lVv~HD~~l~------~g~v~~~t~~eL~~l~--~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~-~~~~~~v~~~ 118 (224)
T 1vd6_A 48 DGVFAVRHDPDTP------LGPVFQVDYADLKAQE--PDLPRLEEVLALKEAFPQAVFNVELKSFPGLG-EEAARRLAAL 118 (224)
T ss_dssp TSCEEECSCSEET------TEEGGGSCHHHHHHHS--TTCCBHHHHHGGGGTCTTCEEEEEECCCTTSH-HHHHHHHHHH
T ss_pred CCcEEEECCCccC------CCChhhCCHHHHHhcC--CCCCCHHHHHHhhhccCCceEEEEECCCCCcc-HHHHHHHHHH
Confidence 9999999999998 2689999999998754 89999999999998 44579999999865322 2467888888
Q ss_pred HHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEE
Q 028497 81 IERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFA 160 (208)
Q Consensus 81 l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~ 160 (208)
+++ ..+++++||++..++++++..|++++|+++...+ ..+.+..+++++++.+..+++++++.+|++|++|++
T Consensus 119 l~~--~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~ 191 (224)
T 1vd6_A 119 LRG--REGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH-----SALLPCLGVEAVHPHHALVTEEAVAGWRKRGLFVVA 191 (224)
T ss_dssp TTT--CSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC-----GGGGGGSCCSEEEEBGGGCCHHHHHHHHHTTCEEEE
T ss_pred Hhc--CCcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc-----HHHHHHcCCcEEecCcccCCHHHHHHHHHCCCEEEE
Confidence 877 3467789999999999999999999999986432 134455788889999999999999999999999999
Q ss_pred eeCCCHHHHHHHHhCCCCEEEcCChHHHHHH
Q 028497 161 WTVDDEDSMRKMLHERVDAVVTSNPILFQRV 191 (208)
Q Consensus 161 wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~ 191 (208)
||+|+++++++++++|||||+||+|..+.++
T Consensus 192 wtvn~~~~~~~l~~~GvdgI~TD~p~~~~~~ 222 (224)
T 1vd6_A 192 WTVNEEGEARRLLALGLDGLIGDRPEVLLPL 222 (224)
T ss_dssp ECCCCHHHHHHHHHTTCSEEEESCHHHHTTS
T ss_pred EeCCCHHHHHHHHhcCCCEEEcCCHHHHHHh
Confidence 9999999999999999999999999988654
No 13
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=9e-36 Score=242.19 Aligned_cols=189 Identities=16% Similarity=0.200 Sum_probs=154.8
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhc--------ccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhH
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQ--------KSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGL 73 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~--------~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~ 73 (208)
||++||+||++++|+|| |.|.|.++||+||+. .+.+++||||+|+|+++++. ..++||+|...
T Consensus 73 Dg~~Vv~HD~~l~rtt~-~~g~v~~~t~~el~~l~~~~~~~~~~~~~iptL~evl~~~~~~-~~l~iE~K~~~------- 143 (292)
T 3mz2_A 73 DSVIVLFHDDTLERTSN-GTGKVSDYTWEELQNFRLKDPEGNITNYRIPTLEEAIRWARGK-TILILDKKDVP------- 143 (292)
T ss_dssp TCCEEECCSSSSTTTBS-CCSCGGGSCHHHHTTSCBBCTTCCBCSCCCCBHHHHHHHHTTT-CCEEECCSSSC-------
T ss_pred CCcEEEECCchhcccCC-CCCchhhCcHHHHhcCCCCCCCCccCCcCCCCHHHHHHHhCCC-cEEEEEECCCc-------
Confidence 99999999999999995 579999999999974 13467999999999999876 68999999752
Q ss_pred HHHHHHHHHhcCCc-ceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcC------ceEeecccccCHH
Q 028497 74 AKDILSVIERTKCY-NCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKA------GVVGVYHPLIDEK 146 (208)
Q Consensus 74 ~~~v~~~l~~~~~~-~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 146 (208)
.+.++++++++++. +++++||++..+++++++.|++++++++.. +. ....+.. .|. .++++.+...+++
T Consensus 144 ~~~v~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~-~~--~l~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 219 (292)
T 3mz2_A 144 MERTAQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKT-KE--AVQDYED-NGIPWSHIMAYVGPKITPEVRE 219 (292)
T ss_dssp HHHHHHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCS-HH--HHHHHHH-TTCCGGGEEEEEESSCCHHHHH
T ss_pred HHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCC-HH--HHHHHHH-hCCChhheeeeecccccccCHH
Confidence 36789999999985 567799999999999999999999988742 11 1122211 232 3445556667889
Q ss_pred HHHHHHhCCCeEEEeeCCC----------HHHHHHHHhCCCCEEEcCChHHHHHHHHHHHhhhhhcC
Q 028497 147 LVRTFHGRNKRVFAWTVDD----------EDSMRKMLHERVDAVVTSNPILFQRVMQDIRTQCLEEG 203 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~----------~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~~~~~~~ 203 (208)
+++.+|++|++|++||+|+ ++.+++++++|||||+||+|..+.+++++.+.++-.+.
T Consensus 220 ~V~~ah~~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~P~~l~~~L~~~~~~~~~~~ 286 (292)
T 3mz2_A 220 VIDMLHERGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDRPIEVAEAISSLIPVSSSKG 286 (292)
T ss_dssp HHHHHHHTTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESCHHHHHHHHGGGSCSSCTTG
T ss_pred HHHHHHHCCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCCHHHHHHHHHHhccCcchhh
Confidence 9999999999999999987 35899999999999999999999999998776665543
No 14
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=7.6e-34 Score=237.17 Aligned_cols=191 Identities=12% Similarity=0.078 Sum_probs=146.9
Q ss_pred CceEEEEeCccchhhhCC-----------CcccccccCHHHhhcc-----c-------------------CCCcCCCHHH
Q 028497 2 ESCWLFTTGRDLQRISGN-----------ITSKVGHLSMKEFAQK-----S-------------------HDQVITTIED 46 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~-----------g~~~i~~~t~~eL~~~-----~-------------------~~~~iptL~e 46 (208)
||++||+||++|+|+|+. |.+.|.++||+||+.. + .+++||||+|
T Consensus 71 Dg~lVv~HD~~l~rtt~~~~~f~~~~~~~g~~~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iptL~e 150 (356)
T 1ydy_A 71 DDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEE 150 (356)
T ss_dssp TSCEEECSSSBCTTTBSHHHHSTTCCCTTSCCBGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSCCCCCBHHH
T ss_pred CCcEEEeCCChHHhhcCcccccccccccCCCcchhhCcHHHHHhCCCCccccccccccccccccccccccCCCcCCCHHH
Confidence 999999999999999952 5578999999999631 1 3579999999
Q ss_pred HHHHHhc------CCceEEEEeecCCCC--CchhHHHHHHHHHHhcCC----cceEEEeeCHHHHHHHHhh-----ccCC
Q 028497 47 ALTLVSN------SVRKVILDAKVGPPS--YEKGLAKDILSVIERTKC----YNCLVWAKSDNLVRDIMRL-----SSNV 109 (208)
Q Consensus 47 vL~~~~~------~~~~l~lEiK~~~~~--~~~~~~~~v~~~l~~~~~----~~~ii~Sf~~~~l~~l~~~-----~p~~ 109 (208)
+|+++++ ..+.++||||..... ....+++.++++++++++ .+++|+||++..+++++++ .|++
T Consensus 151 vl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~p~~ 230 (356)
T 1ydy_A 151 EIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMEL 230 (356)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEECCHHHHHHTTCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTCCC
T ss_pred HHHHHHHhhhcccCCceEEEeecCcccccccchhHHHHHHHHHHHcCCCCCCCCEEEEcCCHHHHHHHHhhcccccCCCc
Confidence 9999985 346899999974210 012478899999999986 3567899999999999998 7999
Q ss_pred eEEEEEEecCC---------------Cch----hhhHhh-hhcCceEeecccccC-----------HHHHHHHHhCCCeE
Q 028497 110 TAGYIIMVDPS---------------TGF----RTNLLR-IRKAGVVGVYHPLID-----------EKLVRTFHGRNKRV 158 (208)
Q Consensus 110 ~~~~l~~~~~~---------------~~~----~~~~~~-~~~~~~~~~~~~~~~-----------~~~v~~~~~~g~~v 158 (208)
++++++....+ .+. ...+.. ...++.+++++..+. +++++.+|++|++|
T Consensus 231 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V 310 (356)
T 1ydy_A 231 NLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVV 310 (356)
T ss_dssp EEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEE
T ss_pred eEEEEeccCcccccccccccccccccchhhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEE
Confidence 99999853210 000 011211 134566776655443 88999999999999
Q ss_pred EEeeCCC---------HHHH-HH-HHhCCCCEEEcCChHHHHHHH
Q 028497 159 FAWTVDD---------EDSM-RK-MLHERVDAVVTSNPILFQRVM 192 (208)
Q Consensus 159 ~~wtv~~---------~~~~-~~-~~~~gvd~i~TD~P~~~~~~~ 192 (208)
++||||+ ++++ ++ +.++||||||||+|+.+.+++
T Consensus 311 ~~WTvn~~~l~~~~~d~~~~~~~~l~~~GVDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 311 HPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFL 355 (356)
T ss_dssp CCBCBCTTSCCTTCSSHHHHHHHHHTTSCCSEEEESCHHHHHHHH
T ss_pred EEEEECcccccccccCHHHHHHHHHHHcCCCEEEeCCHHHHHHhh
Confidence 9999986 4777 65 569999999999999998875
No 15
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=1.8e-30 Score=209.27 Aligned_cols=183 Identities=13% Similarity=0.176 Sum_probs=142.5
Q ss_pred CceEEEEeCccchhhhCCCcccccccCHHHhhc--------ccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhH
Q 028497 2 ESCWLFTTGRDLQRISGNITSKVGHLSMKEFAQ--------KSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGL 73 (208)
Q Consensus 2 Dg~~Vv~HD~~l~r~tg~g~~~i~~~t~~eL~~--------~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~ 73 (208)
||++||+||++++|+|+ |.|.|.++||+||+. .+.+++||||+|+|++++++ +.++||.+ ..+
T Consensus 58 Dg~~vv~HD~~l~r~t~-~~g~v~~~t~~el~~l~~~~~~~~~~~~~iptL~evl~~~~~~-~~~nie~~-------~~~ 128 (278)
T 3i10_A 58 DGQLILMHDNTLDRTTT-GKGEIKNWTLADIKKLKLKDKDGKVTNYVVPTLEEALLTAKGK-IMVNLDKA-------YDI 128 (278)
T ss_dssp TSCEEECSSSBSTTTBS-CCSBGGGSCHHHHTTSCBBCTTSCBCSCCCCBHHHHHHHHTTT-SEEEEESC-------GGG
T ss_pred CCeEEEecCcchhhcCC-CCceeecCcHHHHhcCCCCCCCcccCCCCCCCHHHHHHHhcCC-eEEEEecC-------chH
Confidence 99999999999999995 579999999999974 13468999999999999875 57888842 257
Q ss_pred HHHHHHHHHhcCCcceE-EEeeCHHHHHHHHhhccCCeEEEEEEec---CCCch---hhhHhhhhcCceEeecccc---c
Q 028497 74 AKDILSVIERTKCYNCL-VWAKSDNLVRDIMRLSSNVTAGYIIMVD---PSTGF---RTNLLRIRKAGVVGVYHPL---I 143 (208)
Q Consensus 74 ~~~v~~~l~~~~~~~~i-i~Sf~~~~l~~l~~~~p~~~~~~l~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~---~ 143 (208)
++.++++++++++.+++ ++| ...++.++++.|++++++++... ..... ..++.+..++..+.+.+.. .
T Consensus 129 ~~~v~~~l~~~~~~~~v~i~s--~~~l~~~~~~~p~~~~~~l~~p~i~~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~ 206 (278)
T 3i10_A 129 FDDVYAILEKTETQNQVIMKG--GQPIETVKREFGSYLDKVLYMPVIDLGNKEAEKIITDYLKELRPAAFEIIYSDPKNP 206 (278)
T ss_dssp HHHHHHHHHHHTCGGGEEEEE--SSCHHHHHHHHGGGTTTSEEEEEEETTSTTHHHHHHHHHHHTCCSEEEEEBCCTTCS
T ss_pred HHHHHHHHHHcCCCCeEEEEE--hHHHHHHHHHCcCCccceEEEeeecccccchHHHHHHHHHhcCceEEEEeecCCccc
Confidence 89999999999986654 556 44578999999999888877521 11111 1233344556555554443 3
Q ss_pred CHHHHHHHHhCCCeEEEeeC--------------CCH-HHHHHHHhC-CCCEEEcCChHHHHHHHHHH
Q 028497 144 DEKLVRTFHGRNKRVFAWTV--------------DDE-DSMRKMLHE-RVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv--------------~~~-~~~~~~~~~-gvd~i~TD~P~~~~~~~~~~ 195 (208)
.+.+++.+|++|++|++||+ +++ ..+++++++ |||+|+||+|..+.++++..
T Consensus 207 ~~~~v~~~~~~g~~v~~nTlw~~~~~g~~d~~a~~d~~~~~~~l~~~~Gvd~I~TD~P~~l~~yL~~~ 274 (278)
T 3i10_A 207 LPPKIKQLLFKKSLIWYNTLWGSLAGNHDDNLALTDPEKSYGYLIEQLGARILQTDQPAYLLDYLRKK 274 (278)
T ss_dssp SHHHHHHHHTTTSEEEEECSSGGGBTTCCHHHHHHCHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCEEEEEecccccccCccchhhccChHHHHHHHHhcCCCCEEEeCCHHHHHHHHhhc
Confidence 47899999999999999994 454 469999999 99999999999999999854
No 16
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=99.96 E-value=8.9e-30 Score=206.58 Aligned_cols=181 Identities=13% Similarity=0.111 Sum_probs=133.4
Q ss_pred CceEEEEeCcc---chhhhCCCcccccccCHHHhhcccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhH---HH
Q 028497 2 ESCWLFTTGRD---LQRISGNITSKVGHLSMKEFAQKSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGL---AK 75 (208)
Q Consensus 2 Dg~~Vv~HD~~---l~r~tg~g~~~i~~~t~~eL~~~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~---~~ 75 (208)
||++||+||++ ++|+|| +.|.|.++ ++||+..-.. .-|+|.+.|+ .++||||.....+. .. ..
T Consensus 39 DG~lVv~HD~~~~~l~Rtt~-~~g~v~d~-l~eL~~l~~~-~~~~~~~~L~-------~l~iEiK~~~~~~~-~~~~~~~ 107 (285)
T 1xx1_A 39 GSVPTYTYHGTPCDFGRDCI-RWEYFNVF-LKTLREYTTP-GNAKYRDGFI-------LFVLDLKTGSLSND-QVRPAGE 107 (285)
T ss_dssp TTEEEEEECCSSCCTTSCSC-CEEEHHHH-HHHHHHHTST-TCTTCCTTCC-------EEEEEECCTTCCHH-HHHHHHH
T ss_pred CCEEEEEcCCcccccccccC-CCccHHHH-HHHHHHcccC-CCCccccccc-------EEEEecCCCccccc-ccchhhh
Confidence 99999999999 999995 57999999 9999863221 2267666532 79999998753221 10 01
Q ss_pred HHH-HHHHhcCCc-----c----eEEEeeCHHHHHH-HHhh-------ccCCeEEEEEEecC----CCc-hhhhHhhhhc
Q 028497 76 DIL-SVIERTKCY-----N----CLVWAKSDNLVRD-IMRL-------SSNVTAGYIIMVDP----STG-FRTNLLRIRK 132 (208)
Q Consensus 76 ~v~-~~l~~~~~~-----~----~ii~Sf~~~~l~~-l~~~-------~p~~~~~~l~~~~~----~~~-~~~~~~~~~~ 132 (208)
.+. .++++++.. + ++++||++..+++ ++++ .|++++|+++.... ... ....+.+..+
T Consensus 108 ~~~~~ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 187 (285)
T 1xx1_A 108 NVAKELLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYLPSLPTLDATHEAYKKAG 187 (285)
T ss_dssp HHHHHHHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCSSSCCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEecccccccchhhHHHHHHHHHHhC
Confidence 122 367777753 4 5678999999999 9998 89999999986421 001 1122334455
Q ss_pred CceEee------------c-ccccCHHHHHHHHhCCC--eEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHH
Q 028497 133 AGVVGV------------Y-HPLIDEKLVRTFHGRNK--RVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQD 194 (208)
Q Consensus 133 ~~~~~~------------~-~~~~~~~~v~~~~~~g~--~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~ 194 (208)
++. ++ . +..+++.+++.+|++|+ +|++||||+++++++++++||||||||+|+.+.+++++
T Consensus 188 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P~~~~~~l~~ 263 (285)
T 1xx1_A 188 VDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKVSTTKAALDVGVDGIMTNYPNVLIGVLKE 263 (285)
T ss_dssp CCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHHHHHHS
T ss_pred CCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCHHHHHHHHhcCCCEEEeCCHHHHHHHHhh
Confidence 443 22 1 33567788999999999 99999999999999999999999999999999988874
No 17
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.54 E-value=4.1e-14 Score=113.00 Aligned_cols=181 Identities=16% Similarity=0.151 Sum_probs=104.9
Q ss_pred CceEEEEeCc---cchhhhCCCcccccccCHHHhhcccC-CCcCCCHHHHHHHHhcCCceEEEEeecCCCCCc------h
Q 028497 2 ESCWLFTTGR---DLQRISGNITSKVGHLSMKEFAQKSH-DQVITTIEDALTLVSNSVRKVILDAKVGPPSYE------K 71 (208)
Q Consensus 2 Dg~~Vv~HD~---~l~r~tg~g~~~i~~~t~~eL~~~~~-~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~------~ 71 (208)
||++|++||. +..|.|+.+ ..+.+ .+++|++.-+ +.+ .++++-+-+.+|+|......+ .
T Consensus 62 dg~~v~~hhg~pcdc~r~C~~~-~~~~~-~l~~lr~~ttpg~~---------k~~~~l~lv~~DlK~~~l~~~~~~~aG~ 130 (302)
T 3rlg_A 62 NANPEYTYHGIPCDCGRNCKKY-ENFND-FLKGLRSATTPGNS---------KYQEKLVLVVFDLKTGSLYDNQANDAGK 130 (302)
T ss_dssp TSCBCBCCCCSSCCTTCCSCCC-CBHHH-HHHHHHHHHSTTST---------TCCTTCCEEEEEECGGGSCGGGHHHHHH
T ss_pred CCCEEEEECCCCcchhccCCCC-ccHHH-HHHHHHHhcCCCCC---------ccccceEEEEEEcCCCCCCHHHHHHhHH
Confidence 8999999999 667777664 56666 7777765221 221 112333467899998653211 1
Q ss_pred hHHHHHHHHHHhcCC----cceEEEeeCH---HHHHHHHhh----c-cC--CeEEEEEEecCCCchhhhHhhhhcCc---
Q 028497 72 GLAKDILSVIERTKC----YNCLVWAKSD---NLVRDIMRL----S-SN--VTAGYIIMVDPSTGFRTNLLRIRKAG--- 134 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~----~~~ii~Sf~~---~~l~~l~~~----~-p~--~~~~~l~~~~~~~~~~~~~~~~~~~~--- 134 (208)
.+++++++.+-..|. ..+++++++. +.|+-+++. . ++ -++|+-+..+.......++.+..|.+
T Consensus 131 ~la~kLl~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n~dl~~i~~~~~~~Gi~~h~ 210 (302)
T 3rlg_A 131 KLAKNLLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGNDDIGDVGKAYKKAGITGHI 210 (302)
T ss_dssp HHHHHHHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSCCCHHHHHHHHHHTTCCSCB
T ss_pred HHHHHHHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCCCCHHHHHHHHHhcCCcCcE
Confidence 334444444433222 2345677755 445544421 1 11 34677765332111112333334432
Q ss_pred ----eEeecccccCHHHHHHHHh-----CC--CeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHH
Q 028497 135 ----VVGVYHPLIDEKLVRTFHG-----RN--KRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQD 194 (208)
Q Consensus 135 ----~~~~~~~~~~~~~v~~~~~-----~g--~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~ 194 (208)
.+..+. ..+...++.+.+ .| ++|++||||+++++++++++||||||||+|+.+++++++
T Consensus 211 wqsDGItnC~-~r~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~~~m~~l~~~GVDGIITD~Pd~l~~~l~~ 280 (302)
T 3rlg_A 211 WQSDGITNCL-PRGLSRVNAAVANRDSANGFINKVYYWTVDKRSTTRDALDAGVDGIMTNYPDVITDVLNE 280 (302)
T ss_dssp EEEEECCTTS-CCCSHHHHHHHHHHTSTTCCCSEEEEECCCSHHHHHHHHHTTCSEEEESCHHHHHHHHTS
T ss_pred EecCCcccce-eccHHHHHHHHHhccCCCCceEEEEEEeCCCHHHHHHHHHcCCCEEECCCHHHHHHHHHh
Confidence 232222 223322322211 23 789999999999999999999999999999999998874
No 18
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.57 E-value=0.13 Score=39.78 Aligned_cols=141 Identities=12% Similarity=0.051 Sum_probs=89.6
Q ss_pred HHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCH---HHHHHHHhhccCCeEEEEEEecCCC
Q 028497 45 EDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSD---NLVRDIMRLSSNVTAGYIIMVDPST 121 (208)
Q Consensus 45 ~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~---~~l~~l~~~~p~~~~~~l~~~~~~~ 121 (208)
.++++.+... ++.-=+...+ ......+.+.+-+.|..-.-+...++ +.++.+++..|++.+|.-. ..+
T Consensus 25 ~~~~~~l~~~--~vv~Vir~~~----~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGT---Vlt 95 (232)
T 4e38_A 25 STINNQLKAL--KVIPVIAIDN----AEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGT---ILN 95 (232)
T ss_dssp HHHHHHHHHH--CEEEEECCSS----GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEEC---CCS
T ss_pred HHHHHHHHhC--CEEEEEEcCC----HHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECC---cCC
Confidence 4566666554 3333344332 13445566666676763222322233 4677888877887776422 112
Q ss_pred chhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHH---HHHHHHHHhh
Q 028497 122 GFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILF---QRVMQDIRTQ 198 (208)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~---~~~~~~~~~~ 198 (208)
...-+.+-..|++|+.. +..+++.++.++++|+++.. ++.++.++.+++++|+|.|-. +|... .++++.++..
T Consensus 96 ~~~a~~Ai~AGA~fIvs--P~~~~~vi~~~~~~gi~~ip-Gv~TptEi~~A~~~Gad~vK~-FPa~~~gG~~~lkal~~p 171 (232)
T 4e38_A 96 GEQALAAKEAGATFVVS--PGFNPNTVRACQEIGIDIVP-GVNNPSTVEAALEMGLTTLKF-FPAEASGGISMVKSLVGP 171 (232)
T ss_dssp HHHHHHHHHHTCSEEEC--SSCCHHHHHHHHHHTCEEEC-EECSHHHHHHHHHTTCCEEEE-CSTTTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEe--CCCCHHHHHHHHHcCCCEEc-CCCCHHHHHHHHHcCCCEEEE-CcCccccCHHHHHHHHHH
Confidence 11112233489998764 34789999999999999877 566999999999999999988 88543 3677766544
No 19
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.85 E-value=0.19 Score=37.61 Aligned_cols=118 Identities=11% Similarity=0.057 Sum_probs=74.8
Q ss_pred eEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEE-ee-C-HHHHHHHHhhcc-CCeEEEEEEecCCCchhhhHhhhhc
Q 028497 57 KVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVW-AK-S-DNLVRDIMRLSS-NVTAGYIIMVDPSTGFRTNLLRIRK 132 (208)
Q Consensus 57 ~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~-Sf-~-~~~l~~l~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~ 132 (208)
++..=++..+ ..-...+++.+.+.|..-.-+. .. + .+.++.+|+..| +..+|.-.-.++.+ ...+...|
T Consensus 11 ~~i~~~~~~~----~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~---~~~a~~~G 83 (205)
T 1wa3_A 11 KIVAVLRANS----VEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQ---CRKAVESG 83 (205)
T ss_dssp CEEEEECCSS----HHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHH---HHHHHHHT
T ss_pred CEEEEEecCC----HHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCCHHH---HHHHHHcC
Confidence 3444555543 2445566777777775322221 11 2 245788888766 56666422111111 12223488
Q ss_pred CceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 133 AGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 133 ~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
++++ + .+..+.++++.+++.|+++.+ .+.+..++.+++++|+|.|-.+.
T Consensus 84 ad~i-v-~~~~~~~~~~~~~~~g~~vi~-g~~t~~e~~~a~~~Gad~vk~~~ 132 (205)
T 1wa3_A 84 AEFI-V-SPHLDEEISQFCKEKGVFYMP-GVMTPTELVKAMKLGHTILKLFP 132 (205)
T ss_dssp CSEE-E-CSSCCHHHHHHHHHHTCEEEC-EECSHHHHHHHHHTTCCEEEETT
T ss_pred CCEE-E-cCCCCHHHHHHHHHcCCcEEC-CcCCHHHHHHHHHcCCCEEEEcC
Confidence 9988 3 344568899999999999987 67788899999999999998763
No 20
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.77 E-value=0.31 Score=37.32 Aligned_cols=144 Identities=10% Similarity=0.057 Sum_probs=86.8
Q ss_pred CHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeC---HHHHHHHHhhccCCeEEEEEEecC
Q 028497 43 TIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKS---DNLVRDIMRLSSNVTAGYIIMVDP 119 (208)
Q Consensus 43 tL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~---~~~l~~l~~~~p~~~~~~l~~~~~ 119 (208)
|-.++++.+.... +.-=+...+. .... .+++.+-+.|..-.-+-..+ .+.++.+++..|++.+|.-. .
T Consensus 6 ~~~~~~~~l~~~~--ii~vir~~~~---~~~~-~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt---v 76 (224)
T 1vhc_A 6 TTQQIIEKLRELK--IVPVIALDNA---DDIL-PLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT---V 76 (224)
T ss_dssp CHHHHHHHHHHHC--EEEEECCSSG---GGHH-HHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES---C
T ss_pred chHHHHHHHHHCC--eEEEEeCCCH---HHHH-HHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc---E
Confidence 3455666665542 3222333221 1333 34555556665322222222 24566677778876665432 2
Q ss_pred CCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHH-H--HHHHHHHH
Q 028497 120 STGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPIL-F--QRVMQDIR 196 (208)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~-~--~~~~~~~~ 196 (208)
.....-+.+-..|++++... ..+.+.++.+++.|.++.+ ++.++.++.++.+.|+|.|-- +|.. + .++++..+
T Consensus 77 l~~d~~~~A~~aGAd~v~~p--~~d~~v~~~ar~~g~~~i~-Gv~t~~e~~~A~~~Gad~vk~-Fpa~~~gG~~~lk~l~ 152 (224)
T 1vhc_A 77 LTAEQVVLAKSSGADFVVTP--GLNPKIVKLCQDLNFPITP-GVNNPMAIEIALEMGISAVKF-FPAEASGGVKMIKALL 152 (224)
T ss_dssp CSHHHHHHHHHHTCSEEECS--SCCHHHHHHHHHTTCCEEC-EECSHHHHHHHHHTTCCEEEE-TTTTTTTHHHHHHHHH
T ss_pred eeHHHHHHHHHCCCCEEEEC--CCCHHHHHHHHHhCCCEEe-ccCCHHHHHHHHHCCCCEEEE-eeCccccCHHHHHHHH
Confidence 22222234455899988533 4778889999999999877 478899999999999999988 8843 2 46666665
Q ss_pred hhh
Q 028497 197 TQC 199 (208)
Q Consensus 197 ~~~ 199 (208)
..+
T Consensus 153 ~~~ 155 (224)
T 1vhc_A 153 GPY 155 (224)
T ss_dssp TTT
T ss_pred hhC
Confidence 443
No 21
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=95.72 E-value=0.54 Score=36.67 Aligned_cols=135 Identities=12% Similarity=0.110 Sum_probs=83.0
Q ss_pred HHHHHHhcCC-ceEEEEeecCCCCCc----hhHHHHHHHHHHhcCCcce-EE-----EeeCHHHHHHHHhhccCCeEEEE
Q 028497 46 DALTLVSNSV-RKVILDAKVGPPSYE----KGLAKDILSVIERTKCYNC-LV-----WAKSDNLVRDIMRLSSNVTAGYI 114 (208)
Q Consensus 46 evL~~~~~~~-~~l~lEiK~~~~~~~----~~~~~~v~~~l~~~~~~~~-ii-----~Sf~~~~l~~l~~~~p~~~~~~l 114 (208)
++...++... ..+..|+|..++... ..-...+....++. ..-. ++ +..+.+.|+.+++. -++|+-
T Consensus 30 ~f~~al~~~~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~-v~lPvL-- 105 (251)
T 1i4n_A 30 RFLEVLSGKERVKIIAEFKKASPSAGDINADASLEDFIRMYDEL-ADAISILTEKHYFKGDPAFVRAARNL-TCRPIL-- 105 (251)
T ss_dssp HHHHHHCCSSSCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH-CSEEEEECCCSSSCCCTHHHHHHHTT-CCSCEE--
T ss_pred CHHHHHhhCCCceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh-CCceEEEecccccCCCHHHHHHHHHh-CCCCEE--
Confidence 4444444322 589999997644321 11223344444443 2211 21 33467788888875 456662
Q ss_pred EEecCCCchhh-hHhhhhcCceEeecccccC----HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhC-CCCEEEcCChH
Q 028497 115 IMVDPSTGFRT-NLLRIRKAGVVGVYHPLID----EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHE-RVDAVVTSNPI 186 (208)
Q Consensus 115 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~-gvd~i~TD~P~ 186 (208)
.. ++.....+ .-++..|+|.+......++ .++++.+++.|+.+.+=+ ++.++++++.++ |++.|-+|+++
T Consensus 106 rK-Dfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv-~~~eE~~~A~~l~g~~iIGinnr~ 181 (251)
T 1i4n_A 106 AK-DFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEV-HSREDLEKVFSVIRPKIIGINTRD 181 (251)
T ss_dssp EE-CCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEE-CSHHHHHHHHTTCCCSEEEEECBC
T ss_pred Ee-eCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHhcCCCCEEEEeCcc
Confidence 22 22211111 1246699999887776665 356888999999988865 688899999999 99999887654
No 22
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.07 E-value=0.38 Score=37.97 Aligned_cols=151 Identities=11% Similarity=0.056 Sum_probs=84.0
Q ss_pred ccCHHHhhcccC-CCcCCCHHHHHHHHhcCCceEEEEeecCCCCCc----hhHHHHHHHHHHhcCCcceEEEe---e---
Q 028497 26 HLSMKEFAQKSH-DQVITTIEDALTLVSNSVRKVILDAKVGPPSYE----KGLAKDILSVIERTKCYNCLVWA---K--- 94 (208)
Q Consensus 26 ~~t~~eL~~~~~-~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~----~~~~~~v~~~l~~~~~~~~ii~S---f--- 94 (208)
..++++|+.... ..+...|.++|. .....+.-|+|..++... ..-...+.+..++.|..-..+.. |
T Consensus 24 ~~~~~~l~~~~~~~~~~~~f~~al~---~~~~~~IaE~K~asPs~g~i~~~~~p~~~A~~y~~~GA~~isvltd~~~f~G 100 (272)
T 3qja_A 24 SVSLSEIKAAAAAAPPPLDVMAALR---EPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQG 100 (272)
T ss_dssp TSCHHHHHHHHHHSCCCCCHHHHHT---SSSCEEEEEEC-------------CHHHHHHHHHHTTCSEEEEECCGGGHHH
T ss_pred hCCHHHHHHHHhhCCCCCCHHHHHh---cCCCeEEEEEecCCCCCCccCCCCCHHHHHHHHHHcCCCEEEEecChhhcCC
Confidence 355666654211 112335666554 333689999998754210 11223455555565653332321 1
Q ss_pred CHHHHHHHHhhccCCeEEEEEEecCCCchh-hhHhhhhcCceEeecccccCH----HHHHHHHhCCCeEEEeeCCCHHHH
Q 028497 95 SDNLVRDIMRLSSNVTAGYIIMVDPSTGFR-TNLLRIRKAGVVGVYHPLIDE----KLVRTFHGRNKRVFAWTVDDEDSM 169 (208)
Q Consensus 95 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~g~~v~~wtv~~~~~~ 169 (208)
+.+.++.+++. .++|+- .. +...... -..++..|++.+.+....+++ ++++.+++.|+.+.+ .+++.+++
T Consensus 101 s~~~l~~ir~~-v~lPvl--~k-dfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lv-ev~t~ee~ 175 (272)
T 3qja_A 101 SLDDLDAVRAS-VSIPVL--RK-DFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALV-EVHTEQEA 175 (272)
T ss_dssp HHHHHHHHHHH-CSSCEE--EE-SCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEE-EESSHHHH
T ss_pred CHHHHHHHHHh-CCCCEE--EC-ccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEE-EcCCHHHH
Confidence 34566777664 456663 22 2211111 133356899998775444443 457788999999765 45788899
Q ss_pred HHHHhCCCCEEEcCC
Q 028497 170 RKMLHERVDAVVTSN 184 (208)
Q Consensus 170 ~~~~~~gvd~i~TD~ 184 (208)
.++.+.|++.|-++.
T Consensus 176 ~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 176 DRALKAGAKVIGVNA 190 (272)
T ss_dssp HHHHHHTCSEEEEES
T ss_pred HHHHHCCCCEEEECC
Confidence 999999999988773
No 23
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=94.95 E-value=0.9 Score=34.72 Aligned_cols=141 Identities=6% Similarity=-0.031 Sum_probs=86.5
Q ss_pred HHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCH---HHHHHHHhhccCCeEEEEEEecCC
Q 028497 44 IEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSD---NLVRDIMRLSSNVTAGYIIMVDPS 120 (208)
Q Consensus 44 L~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~---~~l~~l~~~~p~~~~~~l~~~~~~ 120 (208)
.+++++.+.... +.-=+...+. .... .+++.+-+.|..-.-+-..++ +.++.+++..|++.+|.-. ..
T Consensus 16 ~~~~~~~l~~~~--ii~V~r~~~~---~~~~-~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt---vl 86 (225)
T 1mxs_A 16 AARIDAICEKAR--ILPVITIARE---EDIL-PLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT---VL 86 (225)
T ss_dssp HHHHHHHHHHHS--EEEEECCSCG---GGHH-HHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC---CC
T ss_pred HHHHHHHHHHCC--EEEEEeCCCH---HHHH-HHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe---Ee
Confidence 556677666543 3333333221 1333 345555566653222322233 3566677777887776432 22
Q ss_pred CchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHH---HHHHHHHHh
Q 028497 121 TGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILF---QRVMQDIRT 197 (208)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~---~~~~~~~~~ 197 (208)
....-+.+-..|+++++.. ..+.+.++.++..|..+.+ ++.++.++..+.+.|+|.|-- +|... .++++..+.
T Consensus 87 ~~d~~~~A~~aGAd~v~~p--~~d~~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~vk~-FPa~~~~G~~~lk~i~~ 162 (225)
T 1mxs_A 87 DRSMFAAVEAAGAQFVVTP--GITEDILEAGVDSEIPLLP-GISTPSEIMMGYALGYRRFKL-FPAEISGGVAAIKAFGG 162 (225)
T ss_dssp SHHHHHHHHHHTCSSEECS--SCCHHHHHHHHHCSSCEEC-EECSHHHHHHHHTTTCCEEEE-TTHHHHTHHHHHHHHHT
T ss_pred eHHHHHHHHHCCCCEEEeC--CCCHHHHHHHHHhCCCEEE-eeCCHHHHHHHHHCCCCEEEE-ccCccccCHHHHHHHHh
Confidence 2222234455899988643 4688999999999998876 578899999999999999988 99542 355665543
No 24
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.94 E-value=0.091 Score=39.52 Aligned_cols=91 Identities=18% Similarity=0.106 Sum_probs=60.3
Q ss_pred eeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeeccccc--C-HHHHHHHHhCCCeEEE--eeCCCH-
Q 028497 93 AKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLI--D-EKLVRTFHGRNKRVFA--WTVDDE- 166 (208)
Q Consensus 93 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~v~~~~~~g~~v~~--wtv~~~- 166 (208)
++..+.++.+|+..|+.++.+.....+.....-+.+...|++++.++.... + .++++.+++.|+++.+ .++.+.
T Consensus 38 ~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~ 117 (211)
T 3f4w_A 38 REGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLP 117 (211)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHH
T ss_pred hccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHH
Confidence 345678999999878888865443322111101223448999887754332 1 5678889999999875 345554
Q ss_pred HHHHHHHhCCCCEEEcC
Q 028497 167 DSMRKMLHERVDAVVTS 183 (208)
Q Consensus 167 ~~~~~~~~~gvd~i~TD 183 (208)
+.++.+.+.|+|.|.++
T Consensus 118 ~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 118 ARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 56888999999999875
No 25
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=94.92 E-value=0.25 Score=36.74 Aligned_cols=140 Identities=15% Similarity=0.139 Sum_probs=89.0
Q ss_pred cCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhh-ccCCeEEEEEEec
Q 028497 40 VITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRL-SSNVTAGYIIMVD 118 (208)
Q Consensus 40 ~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~-~p~~~~~~l~~~~ 118 (208)
.+-.|+++.+.++..+..+++-+-...- .. .- +.-++.++.++. --++|-....+...++. .--++..|+..+.
T Consensus 41 ~I~~L~~iv~~ik~~gK~vivh~DlI~G-Ls-~d-~~ai~fL~~~~p--dGIIsTk~~~i~~Akk~GL~tIqR~FliDs~ 115 (188)
T 1vkf_A 41 DILNLKFHLKILKDRGKTVFVDMDFVNG-LG-EG-EEAILFVKKAGA--DGIITIKPKNYVVAKKNGIPAVLRFFALDSK 115 (188)
T ss_dssp ETTTHHHHHHHHHHTTCEEEEEGGGEET-CC-SS-HHHHHHHHHHTC--SEEEESCHHHHHHHHHTTCCEEEEEECCSHH
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCcccc-cC-CC-HHHHHHHHhcCC--CEEEcCcHHHHHHHHHcCCEEeeEEEEEEeH
Confidence 4677999999998766666665543221 10 11 122344444442 35667777888888875 2345666665431
Q ss_pred CCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEee-CCCHHHHHHHHhCCCCEEEcCChHHH
Q 028497 119 PSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWT-VDDEDSMRKMLHERVDAVVTSNPILF 188 (208)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wt-v~~~~~~~~~~~~gvd~i~TD~P~~~ 188 (208)
-.... ....+...+|++.+--..+-+++++.+ .+.++.+=+ +++++++.. ++.|+++|.|-+++++
T Consensus 116 al~~~-~~~I~~~kPD~iEiLPg~v~p~~I~~v--~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW 182 (188)
T 1vkf_A 116 AVERG-IEQIETLGVDVVEVLPGAVAPKVARKI--PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILW 182 (188)
T ss_dssp HHHHH-HHHHHHHTCSEEEEESGGGHHHHHTTS--TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHH
T ss_pred HHhhh-hhhccccCCCeEeecCCCchHHHHHHh--cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHh
Confidence 10111 122344678876655444357888888 688988875 689999999 9999999999998875
No 26
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.91 E-value=0.2 Score=38.22 Aligned_cols=120 Identities=8% Similarity=-0.031 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHhcCCcceEEEee-C---HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHH
Q 028497 72 GLAKDILSVIERTKCYNCLVWAK-S---DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKL 147 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf-~---~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (208)
.....+.+.+-+-|+. .+=..+ + .+.++.+++..|++-+|.-. -.+....+.....|++|+.. +.+++++
T Consensus 25 ~~a~~~a~al~~gGi~-~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGT---Vlt~~~a~~ai~AGA~fivs--P~~~~ev 98 (217)
T 3lab_A 25 VHAIPMAKALVAGGVH-LLEVTLRTEAGLAAISAIKKAVPEAIVGAGT---VCTADDFQKAIDAGAQFIVS--PGLTPEL 98 (217)
T ss_dssp GGHHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTSEEEEEC---CCSHHHHHHHHHHTCSEEEE--SSCCHHH
T ss_pred HHHHHHHHHHHHcCCC-EEEEeCCCccHHHHHHHHHHHCCCCeEeecc---ccCHHHHHHHHHcCCCEEEe--CCCcHHH
Confidence 4455677777777763 332333 2 25778888888987776421 11111112223489998755 3378999
Q ss_pred HHHHHhCCC------eEEEeeCCCHHHHHHHHhCCCCEEEcCChHHH---HHHHHHHHhhh
Q 028497 148 VRTFHGRNK------RVFAWTVDDEDSMRKMLHERVDAVVTSNPILF---QRVMQDIRTQC 199 (208)
Q Consensus 148 v~~~~~~g~------~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~---~~~~~~~~~~~ 199 (208)
++.++++|+ ++.. ++.+++++..++++|+|.|-. +|... .++++.++...
T Consensus 99 i~~~~~~~v~~~~~~~~~P-G~~TptE~~~A~~~Gad~vK~-FPa~~~gG~~~lkal~~p~ 157 (217)
T 3lab_A 99 IEKAKQVKLDGQWQGVFLP-GVATASEVMIAAQAGITQLKC-FPASAIGGAKLLKAWSGPF 157 (217)
T ss_dssp HHHHHHHHHHCSCCCEEEE-EECSHHHHHHHHHTTCCEEEE-TTTTTTTHHHHHHHHHTTC
T ss_pred HHHHHHcCCCccCCCeEeC-CCCCHHHHHHHHHcCCCEEEE-CccccccCHHHHHHHHhhh
Confidence 999999999 8777 668999999999999999977 77653 46777665443
No 27
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=94.75 E-value=0.61 Score=39.55 Aligned_cols=149 Identities=16% Similarity=0.175 Sum_probs=88.6
Q ss_pred cCHHHhhcccCCCcCCCHHHHHHHHhcCCceEEEEeecCCCCC----chhHHHHHHHHHHhcCCcceE-E------EeeC
Q 028497 27 LSMKEFAQKSHDQVITTIEDALTLVSNSVRKVILDAKVGPPSY----EKGLAKDILSVIERTKCYNCL-V------WAKS 95 (208)
Q Consensus 27 ~t~~eL~~~~~~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~----~~~~~~~v~~~l~~~~~~~~i-i------~Sf~ 95 (208)
.++++|+.... .+...|.++|. .....+.-|+|..++.. .......+....++. . ..+ + +..+
T Consensus 23 ~~~~~l~~~~~-~~~r~f~~al~---~~~~~vIaEvKraSPSkG~i~~~~~~~~iA~~y~~~-A-~~IsvLTd~~~F~gs 96 (452)
T 1pii_A 23 QPLASFQNEVQ-PSTRHFYDALQ---GARTAFILECKKASPSKGVIRDDFDPARIAAIYKHY-A-SAISVLTDEKYFQGS 96 (452)
T ss_dssp SCGGGTGGGCC-CCCSCHHHHHC---SSSCEEEEEECSEETTTEESCSSCCHHHHHHHHTTT-C-SEEEEECCSTTTCCC
T ss_pred CCHHHHHhhcc-cCCCCHHHHHh---cCCCceEEEecCCCCCCCccCCCCCHHHHHHHHHhh-C-cEEEEEecccccCCC
Confidence 45555544322 12224666664 22368999999654321 111222333333332 2 221 1 1135
Q ss_pred HHHHHHHHhhccCCeEEEEEEecCCCchhh-hHhhhhcCceEeecccccCH----HHHHHHHhCCCeEEEeeCCCHHHHH
Q 028497 96 DNLVRDIMRLSSNVTAGYIIMVDPSTGFRT-NLLRIRKAGVVGVYHPLIDE----KLVRTFHGRNKRVFAWTVDDEDSMR 170 (208)
Q Consensus 96 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~g~~v~~wtv~~~~~~~ 170 (208)
.+.|+.+|+.. ++|+ +.. ++.....+ .-++..|+|.+......++. ++++.+|+.|+.+.+=. ++.++++
T Consensus 97 ~~dL~~vr~~v-~lPv--LrK-DFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEv-h~~eE~~ 171 (452)
T 1pii_A 97 FNFLPIVSQIA-PQPI--LCK-DFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEV-SNEEEQE 171 (452)
T ss_dssp TTHHHHHHHHC-CSCE--EEE-SCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEE-CSHHHHH
T ss_pred HHHHHHHHHhc-CCCe--EEE-eccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEe-CCHHHHH
Confidence 67788888753 5666 232 23221111 11466999998877776663 56888999999988755 7899999
Q ss_pred HHHhCCCCEEEcCChH
Q 028497 171 KMLHERVDAVVTSNPI 186 (208)
Q Consensus 171 ~~~~~gvd~i~TD~P~ 186 (208)
+++++|++.|=+|+..
T Consensus 172 ~A~~lga~iIGinnr~ 187 (452)
T 1pii_A 172 RAIALGAKVVGINNRD 187 (452)
T ss_dssp HHHHTTCSEEEEESEE
T ss_pred HHHHCCCCEEEEeCCC
Confidence 9999999999988754
No 28
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=94.58 E-value=0.9 Score=34.43 Aligned_cols=139 Identities=9% Similarity=-0.008 Sum_probs=85.1
Q ss_pred HHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCH---HHHHHHHhhccCCeEEEEEEecCCCc
Q 028497 46 DALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSD---NLVRDIMRLSSNVTAGYIIMVDPSTG 122 (208)
Q Consensus 46 evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~---~~l~~l~~~~p~~~~~~l~~~~~~~~ 122 (208)
++++.+....+.-.+...+. .... .+++.+-+.|..-.-+-..++ +.++.+++..|++.+|.-. ....
T Consensus 8 ~~~~~l~~~~~i~v~r~~~~-----~~~~-~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt---vi~~ 78 (214)
T 1wbh_A 8 SAESILTTGPVVPVIVVKKL-----EHAV-PMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT---VLNP 78 (214)
T ss_dssp CHHHHHHSCSEEEEECCSSG-----GGHH-HHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES---CCSH
T ss_pred HHHHHHHHCCEEEEEECCCH-----HHHH-HHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE---EEEH
Confidence 35566655533334454332 1333 345555566653222322222 4566677777876665422 1122
Q ss_pred hhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHH---HHHHHHHHh
Q 028497 123 FRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILF---QRVMQDIRT 197 (208)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~---~~~~~~~~~ 197 (208)
..-+.+-..|+++++.. ..+.+.++.++..|..+.. ++.++.++.++.+.|+|.|-- +|... .++++..+.
T Consensus 79 d~~~~A~~aGAd~v~~p--~~d~~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~-Fpa~~~gG~~~lk~i~~ 152 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISP--GLTEPLLKAATEGTIPLIP-GISTVSELMLGMDYGLKEFKF-FPAEANGGVKALQAIAG 152 (214)
T ss_dssp HHHHHHHHHTCSCEEES--SCCHHHHHHHHHSSSCEEE-EESSHHHHHHHHHTTCCEEEE-TTTTTTTHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEcC--CCCHHHHHHHHHhCCCEEE-ecCCHHHHHHHHHCCCCEEEE-ecCccccCHHHHHHHhh
Confidence 22234455899988644 4688999999999999877 478899999999999999988 88432 456665554
No 29
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=94.17 E-value=1.3 Score=33.25 Aligned_cols=111 Identities=12% Similarity=0.040 Sum_probs=69.2
Q ss_pred HHHHHHhcCCcceEEEeeCH---HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHh
Q 028497 77 ILSVIERTKCYNCLVWAKSD---NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHG 153 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~Sf~~---~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 153 (208)
+++.+-+.|..-.-+-..++ +.++.+++ |++.+++-. ......-+.+...|+++++.. ..+.+.++.++.
T Consensus 30 ~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~--~~~~~gag~---vl~~d~~~~A~~~GAd~v~~~--~~d~~v~~~~~~ 102 (207)
T 2yw3_A 30 LARVLEEEGVGALEITLRTEKGLEALKALRK--SGLLLGAGT---VRSPKEAEAALEAGAAFLVSP--GLLEEVAALAQA 102 (207)
T ss_dssp HHHHHHHTTCCEEEEECSSTHHHHHHHHHTT--SSCEEEEES---CCSHHHHHHHHHHTCSEEEES--SCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCChHHHHHHHHHhC--CCCEEEeCe---EeeHHHHHHHHHcCCCEEEcC--CCCHHHHHHHHH
Confidence 44445555653222222233 34556666 666655432 222222234455899987643 467889999999
Q ss_pred CCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHH---HHHHHHH
Q 028497 154 RNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQ---RVMQDIR 196 (208)
Q Consensus 154 ~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~---~~~~~~~ 196 (208)
.|+.+.. ++.+.+++.++.+.|+|.|.- +|.... ++++..+
T Consensus 103 ~g~~~i~-G~~t~~e~~~A~~~Gad~v~~-fpa~~~gG~~~lk~l~ 146 (207)
T 2yw3_A 103 RGVPYLP-GVLTPTEVERALALGLSALKF-FPAEPFQGVRVLRAYA 146 (207)
T ss_dssp HTCCEEE-EECSHHHHHHHHHTTCCEEEE-TTTTTTTHHHHHHHHH
T ss_pred hCCCEEe-cCCCHHHHHHHHHCCCCEEEE-ecCccccCHHHHHHHH
Confidence 9998776 477899999999999999988 885433 4555444
No 30
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.12 E-value=1.5 Score=33.59 Aligned_cols=132 Identities=10% Similarity=0.064 Sum_probs=80.3
Q ss_pred HHHHHHHH--hcCCceEEEEeecC--CCCCchhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeE-EEEEEec
Q 028497 44 IEDALTLV--SNSVRKVILDAKVG--PPSYEKGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTA-GYIIMVD 118 (208)
Q Consensus 44 L~evL~~~--~~~~~~l~lEiK~~--~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~-~~l~~~~ 118 (208)
++++.+.+ ++ +|.+-.-.. .+-+.+.....+.+...+.|..- +...+.+.++.+|+. -++|+ |......
T Consensus 7 ~~~~~~~~~~~~---~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~--i~~~~~~~i~~ir~~-v~~Pvig~~k~~~ 80 (229)
T 3q58_A 7 LARLEQSVHENG---GLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVA--VRIEGIENLRTVRPH-LSVPIIGIIKRDL 80 (229)
T ss_dssp HHHHHHHHHHHC---CEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSE--EEEESHHHHHHHGGG-CCSCEEEECBCCC
T ss_pred HHHHHHHhhhcC---CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcE--EEECCHHHHHHHHHh-cCCCEEEEEeecC
Confidence 55666666 44 355544432 22233455556666677767532 223467888999886 46774 3322111
Q ss_pred CC--C---chhhhH--hhhhcCceEeecccc-----cCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 119 PS--T---GFRTNL--LRIRKAGVVGVYHPL-----IDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 119 ~~--~---~~~~~~--~~~~~~~~~~~~~~~-----~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
+. . .....+ ....|++++.+.... .-.++++.+++.|+.+.+ .+.+.++++++.+.|+|.|.+
T Consensus 81 ~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~-~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 81 TGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMA-DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp SSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEE-ECSSHHHHHHHHHTTCSEEEC
T ss_pred CCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEE-ecCCHHHHHHHHhCCCCEEEe
Confidence 11 0 111122 245899987654332 235789999999998877 568899999999999999964
No 31
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=93.40 E-value=0.83 Score=34.07 Aligned_cols=145 Identities=12% Similarity=0.113 Sum_probs=91.1
Q ss_pred CcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhc-cCCeEEEEEEe
Q 028497 39 QVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLS-SNVTAGYIIMV 117 (208)
Q Consensus 39 ~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~-p~~~~~~l~~~ 117 (208)
-.+.+|+++.+.++..+..+++-+-...- .. .- +.-++.+++. ...--++|.....++..++.. .-+++.|+..+
T Consensus 38 g~i~~l~~~v~~lk~~~K~v~Vh~Dli~G-ls-~d-~~ai~fL~~~-~~pdGIIsTk~~~i~~Ak~~gL~tIqR~FliDS 113 (192)
T 3kts_A 38 THVAQLKALVKYAQAGGKKVLLHADLVNG-LK-ND-DYAIDFLCTE-ICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDS 113 (192)
T ss_dssp EETTTHHHHHHHHHHTTCEEEEEGGGEET-CC-CS-HHHHHHHHHT-TCCSEEEESCHHHHHHHHHTTCEEEEEEECCSH
T ss_pred CcHHHHHHHHHHHHHcCCeEEEecCchhc-cC-Cc-HHHHHHHHhC-CCCCEEEeCcHHHHHHHHHCCCeEEEEEEEEEc
Confidence 46899999999998865555554332210 00 11 1234455542 222356778888888888852 34555555432
Q ss_pred cCCCchhhhHhhhhcCceEeecccccCHHHHHHHH-hCCCeEEEee-CCCHHHHHHHHhCCCCEEEcCChHHHH
Q 028497 118 DPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFH-GRNKRVFAWT-VDDEDSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~v~~wt-v~~~~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
.-.... ....+...+|++-+--. +-+++++.++ ..+.++.+=+ +++++++..+++.|+++|.|-++..+.
T Consensus 114 ~al~~~-~~~i~~~~PD~iEiLPG-i~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 114 SAYNKG-VALIQKVQPDCIELLPG-IIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp HHHHHH-HHHHHHHCCSEEEEECT-TCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred chHHHH-HHHHhhcCCCEEEECCc-hhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 110001 12234477887754433 3467888765 5688888875 689999999999999999999887764
No 32
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=93.32 E-value=2.4 Score=33.39 Aligned_cols=140 Identities=14% Similarity=0.052 Sum_probs=88.2
Q ss_pred cCCCHHHHHHHHh-cCCceEEEEeecCCCCC----chhHHHHHHHHHHhcCCcceEEE------eeCHHHHHHHHhhccC
Q 028497 40 VITTIEDALTLVS-NSVRKVILDAKVGPPSY----EKGLAKDILSVIERTKCYNCLVW------AKSDNLVRDIMRLSSN 108 (208)
Q Consensus 40 ~iptL~evL~~~~-~~~~~l~lEiK~~~~~~----~~~~~~~v~~~l~~~~~~~~ii~------Sf~~~~l~~l~~~~p~ 108 (208)
+...|.++|..-. .....+.-|+|..++.. ...-...+.+..++.|..-..+. ..+.+.++.+++. -+
T Consensus 42 ~~~~f~~al~~~~~~~~~~vIaE~KraSPSkG~i~~~~dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-v~ 120 (272)
T 3tsm_A 42 APRGFLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQA-CS 120 (272)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEECSEETTTEESCSSCCHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHT-SS
T ss_pred CCCCHHHHHhhccccCCceEEEEeccCCCCCCccCCCCCHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHh-cC
Confidence 3456888886542 12258999999765421 11122346666677775433221 1356778888764 45
Q ss_pred CeEEEEEEecCC-CchhhhHhhhhcCceEeecccccCH----HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 109 VTAGYIIMVDPS-TGFRTNLLRIRKAGVVGVYHPLIDE----KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 109 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+|+- .. +.. ....-.-++..|++.+......++. ++++.+++.|+.+.+=+ ++.+++++++++|++.|-+|
T Consensus 121 lPVl--~K-dfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvev-h~~eEl~~A~~~ga~iIGin 196 (272)
T 3tsm_A 121 LPAL--RK-DFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEV-HDEAEMERALKLSSRLLGVN 196 (272)
T ss_dssp SCEE--EE-SCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEE-CSHHHHHHHTTSCCSEEEEE
T ss_pred CCEE--EC-CccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEe-CCHHHHHHHHhcCCCEEEEC
Confidence 6662 22 211 1110122356899998877666664 46778899999887654 78899999999999999887
Q ss_pred C
Q 028497 184 N 184 (208)
Q Consensus 184 ~ 184 (208)
+
T Consensus 197 n 197 (272)
T 3tsm_A 197 N 197 (272)
T ss_dssp C
T ss_pred C
Confidence 4
No 33
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=93.26 E-value=1.6 Score=33.98 Aligned_cols=138 Identities=12% Similarity=0.105 Sum_probs=86.3
Q ss_pred CCcCCCHHHHHHHHhcC-CceEEEEeecCCCCC---chhHHHHHHHHHHhcCCcceEE-E-----eeCHHHHHHHHhhcc
Q 028497 38 DQVITTIEDALTLVSNS-VRKVILDAKVGPPSY---EKGLAKDILSVIERTKCYNCLV-W-----AKSDNLVRDIMRLSS 107 (208)
Q Consensus 38 ~~~iptL~evL~~~~~~-~~~l~lEiK~~~~~~---~~~~~~~v~~~l~~~~~~~~ii-~-----Sf~~~~l~~l~~~~p 107 (208)
..++..|.+.+...... ...+.-|+|..++.. .... ..+.+.. +.|..-.-+ . ..+.+.+..+++. -
T Consensus 27 ~~p~~~~~~~l~~~~~~~~~~iIAEiKraSPSkg~i~~dp-~~iA~~~-~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~-v 103 (258)
T 4a29_A 27 QRPIISLNERILEFNKRNITAIIAVYERKSPSGLDVERDP-IEYAKFM-ERYAVGLSITTEEKYFNGSYETLRKIASS-V 103 (258)
T ss_dssp SSCCCCHHHHHHHHHHTTCCCEEEEECSBCTTSCBCCCCH-HHHHHHH-TTTCSEEEEECCSTTTCCCHHHHHHHHTT-C
T ss_pred cCCccCHHHHHHHHhhCCCcEEEEEEecCCCCCCCccCCH-HHHHHHH-hCCCeEEEEeCCCCCCCCCHHHHHHHHHh-c
Confidence 45677899988776543 357999999865531 1111 2233322 234322212 1 1256777788774 3
Q ss_pred CCeEEEEEEecCCCchhhhH--hhhhcCceEeecccccCH----HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEE
Q 028497 108 NVTAGYIIMVDPSTGFRTNL--LRIRKAGVVGVYHPLIDE----KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVV 181 (208)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~ 181 (208)
++|+ |.. ++-. .+..+ ++..|+|.+..-...+++ ++.+.+++.|+.+.+ -|+++++++++++.|++.|=
T Consensus 104 ~lPv--LrK-DFii-d~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~Lv-EVh~~~El~rAl~~~a~iIG 178 (258)
T 4a29_A 104 SIPI--LMS-DFIV-KESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLI-LINDENDLDIALRIGARFIG 178 (258)
T ss_dssp SSCE--EEE-SCCC-SHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHHTTCSEEE
T ss_pred CCCE--eec-cccc-cHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHH-hcchHHHHHHHhcCCCcEEE
Confidence 5665 332 2211 11122 366899988766666654 568889999999877 56899999999999999886
Q ss_pred cC
Q 028497 182 TS 183 (208)
Q Consensus 182 TD 183 (208)
.|
T Consensus 179 IN 180 (258)
T 4a29_A 179 IM 180 (258)
T ss_dssp EC
T ss_pred Ee
Confidence 55
No 34
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=92.98 E-value=1.2 Score=34.57 Aligned_cols=86 Identities=5% Similarity=0.016 Sum_probs=56.6
Q ss_pred EeeCHHHHHHHHhhccCCeEEE-EEEecCCCchhhhHhhhhcCceEeecccccC--HHHHHHHHhCCCeEEEeeCC--C-
Q 028497 92 WAKSDNLVRDIMRLSSNVTAGY-IIMVDPSTGFRTNLLRIRKAGVVGVYHPLID--EKLVRTFHGRNKRVFAWTVD--D- 165 (208)
Q Consensus 92 ~Sf~~~~l~~l~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~g~~v~~wtv~--~- 165 (208)
+||-+..++.+|+..|+.++-. ++-.+|..+ ...+ ...|++++.++..... .+.++.+++.|+++.+- +| +
T Consensus 70 it~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~-i~~~-~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gva-lnp~Tp 146 (246)
T 3inp_A 70 LTFGPMVLKALRDYGITAGMDVHLMVKPVDAL-IESF-AKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLA-LNPATG 146 (246)
T ss_dssp BCCCHHHHHHHHHHTCCSCEEEEEECSSCHHH-HHHH-HHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEE-ECTTCC
T ss_pred hhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHH-HHHH-HHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEE-ecCCCC
Confidence 4678899999999887887755 444445322 2333 3489999887654332 46889999999998774 33 2
Q ss_pred HHHHHHHHhCCCCEEE
Q 028497 166 EDSMRKMLHERVDAVV 181 (208)
Q Consensus 166 ~~~~~~~~~~gvd~i~ 181 (208)
.+.++.++. ++|.|.
T Consensus 147 ~e~l~~~l~-~vD~Vl 161 (246)
T 3inp_A 147 IDCLKYVES-NIDRVL 161 (246)
T ss_dssp SGGGTTTGG-GCSEEE
T ss_pred HHHHHHHHh-cCCEEE
Confidence 344555554 477663
No 35
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.93 E-value=2.4 Score=32.41 Aligned_cols=133 Identities=17% Similarity=0.113 Sum_probs=80.6
Q ss_pred CHHHHHHHH--hcCCceEEEEeecC--CCCCchhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeE-EEEEEe
Q 028497 43 TIEDALTLV--SNSVRKVILDAKVG--PPSYEKGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTA-GYIIMV 117 (208)
Q Consensus 43 tL~evL~~~--~~~~~~l~lEiK~~--~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~-~~l~~~ 117 (208)
.++++++.+ ++ +|.+-.-.. .+-+.+.....+.+.+.+.|..- +...+.+.++.+|+. -++|+ |.....
T Consensus 6 ~~~~~~~~~~~~~---~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~--i~~~~~~~i~~ir~~-v~~Pvig~~k~d 79 (232)
T 3igs_A 6 LLEQLDKNIAASG---GLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVA--VRIEGIDNLRMTRSL-VSVPIIGIIKRD 79 (232)
T ss_dssp HHHHHHHHHHHHC---CEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSE--EEEESHHHHHHHHTT-CCSCEEEECBCC
T ss_pred HHHHHHHHhhhcC---CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeE--EEECCHHHHHHHHHh-cCCCEEEEEeec
Confidence 355666666 44 354544432 22233455566777777777532 333467888999885 45675 322111
Q ss_pred cCC--C---chhhh--HhhhhcCceEeeccc-----ccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 118 DPS--T---GFRTN--LLRIRKAGVVGVYHP-----LIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 118 ~~~--~---~~~~~--~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.+. . ..... .....|++++.+... ..-.++++.+++.|+.+.+ .+.+.++++++.+.|+|.|.+
T Consensus 80 ~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~-~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 80 LDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMA-DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp CSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEE-ECCSHHHHHHHHHTTCSEEEC
T ss_pred CCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEE-eCCCHHHHHHHHhCCCCEEEE
Confidence 110 0 11112 224589998765433 2235789999999998876 668999999999999999964
No 36
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=92.38 E-value=2.9 Score=31.94 Aligned_cols=125 Identities=12% Similarity=0.019 Sum_probs=73.9
Q ss_pred ceEEEEeecCCCCCchhHHHHHHHHHHhcCCc-ceEEEee-------CH-HHHHHHHhh-ccCCeEEEEEEecCCCchhh
Q 028497 56 RKVILDAKVGPPSYEKGLAKDILSVIERTKCY-NCLVWAK-------SD-NLVRDIMRL-SSNVTAGYIIMVDPSTGFRT 125 (208)
Q Consensus 56 ~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~-~~ii~Sf-------~~-~~l~~l~~~-~p~~~~~~l~~~~~~~~~~~ 125 (208)
..+.|.+-...... +.+...+.+++++++.. .++++.. +. .....++++ .-++++++--. .. .+...
T Consensus 95 ~~l~iNls~~~l~~-~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDdf-G~-g~s~l 171 (250)
T 4f3h_A 95 THLLVRIGPNSFSD-PQMIDTIREQLAVYGVPGERLWLQTPESKVFTHLRNAQQFLASVSAMGCKVGLEQF-GS-GLDSF 171 (250)
T ss_dssp CEEEEECCGGGSSC-HHHHHHHHHHHHHTTCCGGGEEEEEEHHHHHHSHHHHHHHHHHHHTTTCEEEEEEE-TS-STHHH
T ss_pred ceEEEEeCHHHhCC-cHHHHHHHHHHHHcCCCcceEEEEEechhhhcCHHHHHHHHHHHHHCCCEEEEeCC-CC-CchHH
Confidence 35555554433222 47788899999999863 4443332 21 222333333 23566654321 11 11212
Q ss_pred hHhhhhcCceEeeccccc------------CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 126 NLLRIRKAGVVGVYHPLI------------DEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.......++++-+...++ -..++..++..|++|.+=+|.++++++.+.++|++.++-.
T Consensus 172 ~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeGVEt~~~~~~l~~~G~~~~QG~ 241 (250)
T 4f3h_A 172 QLLAHFQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAEFVADAQSMSSFFTAGVDYVQGD 241 (250)
T ss_dssp HHHTTSCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECCCCCHHHHHHHHHHTCSEECST
T ss_pred HHHhhCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEeccCCHHHHHHHHHcCCCEEeec
Confidence 222335566665542211 1345778899999999999999999999999999998754
No 37
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=92.34 E-value=0.87 Score=34.40 Aligned_cols=88 Identities=7% Similarity=-0.065 Sum_probs=57.5
Q ss_pred eCHHHHHHHHhhccCCeEEEEEEecCCCch-hhhHhhhhcCceEeecccccC---HHHHHHHHhCCCeEEE--eeCCCHH
Q 028497 94 KSDNLVRDIMRLSSNVTAGYIIMVDPSTGF-RTNLLRIRKAGVVGVYHPLID---EKLVRTFHGRNKRVFA--WTVDDED 167 (208)
Q Consensus 94 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~g~~v~~--wtv~~~~ 167 (208)
+-.+.++.+|+..|+.++.+..... ..+. ..+.....|++++.++..... .+.++.++++|+++.+ -.+.+.+
T Consensus 45 ~G~~~i~~lr~~~~~~~i~ld~~l~-d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~ 123 (218)
T 3jr2_A 45 EGMKAVSTLRHNHPNHILVCDMKTT-DGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQ 123 (218)
T ss_dssp HTTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHH
T ss_pred cCHHHHHHHHHhCCCCcEEEEEeec-ccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHH
Confidence 4567899999987887775443221 1111 112223489999887654321 4567788999998874 3455677
Q ss_pred HHHHHHhCCCCEEEc
Q 028497 168 SMRKMLHERVDAVVT 182 (208)
Q Consensus 168 ~~~~~~~~gvd~i~T 182 (208)
++..+.+.|+|.+.+
T Consensus 124 ~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 124 DAKAWVDLGITQAIY 138 (218)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCccceee
Confidence 888888889998654
No 38
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=92.18 E-value=0.66 Score=35.52 Aligned_cols=112 Identities=14% Similarity=0.085 Sum_probs=64.8
Q ss_pred EeeCHHHHHHHHhhccCCeEEE-EEEecCCCchhhhHhhhhcCceEeeccc----ccCHHHHHHHHhCCCeEEEee-CCC
Q 028497 92 WAKSDNLVRDIMRLSSNVTAGY-IIMVDPSTGFRTNLLRIRKAGVVGVYHP----LIDEKLVRTFHGRNKRVFAWT-VDD 165 (208)
Q Consensus 92 ~Sf~~~~l~~l~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~g~~v~~wt-v~~ 165 (208)
.++....++.+|+.. +.++.. ++-.+|..+ -+.+...|++++.++.. ....+.++.+++.|+.+.+-. ..+
T Consensus 47 ~~~g~~~v~~lr~~~-~~~~~vhlmv~dp~~~--i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t 123 (230)
T 1tqj_A 47 ITIGPLIVDAIRPLT-KKTLDVHLMIVEPEKY--VEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPST 123 (230)
T ss_dssp BCBCHHHHHHHGGGC-CSEEEEEEESSSGGGT--HHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTC
T ss_pred hhhhHHHHHHHHhhc-CCcEEEEEEccCHHHH--HHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCC
Confidence 456678888998864 445542 232344322 23345589999876654 233577889999999987754 244
Q ss_pred HHHHHHHHhCCCCEE----------EcCChHHHHHHHHHHHhhhhhcCccc
Q 028497 166 EDSMRKMLHERVDAV----------VTSNPILFQRVMQDIRTQCLEEGFSL 206 (208)
Q Consensus 166 ~~~~~~~~~~gvd~i----------~TD~P~~~~~~~~~~~~~~~~~~~~~ 206 (208)
+.+..+.+..++|.| -..++....+.+++.+..+.+.|.+.
T Consensus 124 ~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~ 174 (230)
T 1tqj_A 124 PLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDP 174 (230)
T ss_dssp CGGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 433333333478866 12244445555666665555444443
No 39
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=91.98 E-value=1.9 Score=35.91 Aligned_cols=134 Identities=10% Similarity=0.062 Sum_probs=78.5
Q ss_pred HHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCc-ce-EE-Eee----CHHH----HHHHHhhccCCeEE
Q 028497 44 IEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCY-NC-LV-WAK----SDNL----VRDIMRLSSNVTAG 112 (208)
Q Consensus 44 L~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~-~~-ii-~Sf----~~~~----l~~l~~~~p~~~~~ 112 (208)
++.++..+......+.|.+-..... .+.+...+.+++++++.. .+ ++ ++- +... +..+++ -+++++
T Consensus 264 l~~~~~~~~~~~~~~~iNls~~~l~-~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~l~~--~G~~ia 340 (430)
T 3pjx_A 264 LERVLEQMAGHEESLALNLSSATLA-DPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRLRE--LGFSLS 340 (430)
T ss_dssp HHHHHHHHTTCCCCEEEECCHHHHH-CHHHHHHHHHHHHTTGGGGGGEEEEEEGGGCCCHHHHHHHHHHHHH--HTCEEE
T ss_pred HHHHHHHHhcCCCcEEEEeCHHHhC-ChHHHHHHHHHHHhcCCCCceEEEEEECccccccHHHHHHHHHHHH--CCCEEE
Confidence 5566666655433455554432111 136778888899998863 33 33 221 2222 233333 355554
Q ss_pred EEEEecCCC-chhhhHhhhhcCceEeeccccc------------CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCE
Q 028497 113 YIIMVDPST-GFRTNLLRIRKAGVVGVYHPLI------------DEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDA 179 (208)
Q Consensus 113 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~ 179 (208)
+-- .+. ++...+.+...++++-+...++ -..++..+|..|++|.+=+|.++++++.+.++|++.
T Consensus 341 lDd---fG~g~ssl~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~l~~~viaeGVEt~~~~~~l~~~g~~~ 417 (430)
T 3pjx_A 341 LQR---FGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYG 417 (430)
T ss_dssp EEE---ECCCHHHHCTHHHHCCSCEEECGGGTTTTTTCHHHHHHHHHHHHHHHTTTCCEEECCCCCHHHHHHHHHTTCSE
T ss_pred EeC---CCCCchhHHHHHhCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHCCCcEEEEecCCHHHHHHHHHcCCCe
Confidence 322 222 1212222335566665543322 134577789999999999999999999999999999
Q ss_pred EEcC
Q 028497 180 VVTS 183 (208)
Q Consensus 180 i~TD 183 (208)
++-.
T Consensus 418 ~QG~ 421 (430)
T 3pjx_A 418 VQGQ 421 (430)
T ss_dssp EESG
T ss_pred eccc
Confidence 8754
No 40
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=91.87 E-value=0.93 Score=37.56 Aligned_cols=155 Identities=12% Similarity=0.158 Sum_probs=95.9
Q ss_pred CcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEE-EeeCHHHHHHHHhhccCCeEEEEEEe
Q 028497 39 QVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLV-WAKSDNLVRDIMRLSSNVTAGYIIMV 117 (208)
Q Consensus 39 ~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii-~Sf~~~~l~~l~~~~p~~~~~~l~~~ 117 (208)
..+..|.++++++++.+..+.+||-+...... ..--.-++.+++.|+.-.=+ ..|+.+.+..+.+...++++.+..+.
T Consensus 71 ~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~L-g~s~~dl~~f~~lGi~gLRLD~Gf~~~eia~ls~n~~glkIeLNASt 149 (385)
T 1x7f_A 71 EIVAEFKEIINHAKDNNMEVILDVAPAVFDQL-GISYSDLSFFAELGADGIRLDVGFDGLTEAKMTNNPYGLKIELNVSN 149 (385)
T ss_dssp ---HHHHHHHHHHHHTTCEEEEEECTTCC-------CCCTHHHHHHTCSEEEESSCCSSHHHHHHTTCTTCCEEEEETTS
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHc-CCCHHHHHHHHHcCCCEEEEcCCCCHHHHHHHhcCCCCCEEEEeCcC
Confidence 34566899999999888899999987643210 11111234667778754434 88888888888776668899888764
Q ss_pred cCCCchhhhHhhhhcCc---eEeec--c----cccCHHH----HHHHHhCCCeEEEeeCCC-------------------
Q 028497 118 DPSTGFRTNLLRIRKAG---VVGVY--H----PLIDEKL----VRTFHGRNKRVFAWTVDD------------------- 165 (208)
Q Consensus 118 ~~~~~~~~~~~~~~~~~---~~~~~--~----~~~~~~~----v~~~~~~g~~v~~wtv~~------------------- 165 (208)
. ......+.+ .+++ +.+++ | +-++.++ -+++++.|+++.++...+
T Consensus 150 ~--~~~l~~l~~-~~~n~~~l~acHNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~~rGPwpl~eGLPTLE~H 226 (385)
T 1x7f_A 150 D--IAYLENILS-HQANKSALIGCHNFYPQKFTGLPYDYFIRCSERFKKHGIRSAAFITSHVANIGPWDINDGLCTLEEH 226 (385)
T ss_dssp C--SSHHHHHTT-SSCCGGGEEEECCCBCSTTCSBCHHHHHHHHHHHHHTTCCCEEEECCSSCCBCSSSCCSCCBSBGGG
T ss_pred C--HHHHHHHHH-cCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCccccCCccccCCCCchHHH
Confidence 2 211223322 4443 22221 2 2345444 345899999998875321
Q ss_pred -----HHHHHHHHhCC-CCEEEcCChHHHHHHHHHHHh
Q 028497 166 -----EDSMRKMLHER-VDAVVTSNPILFQRVMQDIRT 197 (208)
Q Consensus 166 -----~~~~~~~~~~g-vd~i~TD~P~~~~~~~~~~~~ 197 (208)
..++..++..| +|.|+--+|..-.+-++....
T Consensus 227 R~~~~~~~a~~L~~~g~iD~ViIGd~~~Se~el~~l~~ 264 (385)
T 1x7f_A 227 RNLPIEVQAKHLWATGLIDDVIIGNAYASEEELEKLGN 264 (385)
T ss_dssp TTSCHHHHHHHHHHTTSCCEEEECSBCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHH
Confidence 13788888999 999988877666666655543
No 41
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=91.37 E-value=0.5 Score=42.38 Aligned_cols=60 Identities=5% Similarity=0.032 Sum_probs=49.8
Q ss_pred HHHHHHHHhCCCeEEEeeCCC----------HHHHHHHHhCCCCEEEcCCh------------HHHHHHHHHHHhhhhhc
Q 028497 145 EKLVRTFHGRNKRVFAWTVDD----------EDSMRKMLHERVDAVVTSNP------------ILFQRVMQDIRTQCLEE 202 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~----------~~~~~~~~~~gvd~i~TD~P------------~~~~~~~~~~~~~~~~~ 202 (208)
++++++++++|+.+++|.--. .+.++.+.++||.||=+|+- +.+.++..+....|.+.
T Consensus 421 ~eL~~YA~sKGV~iilw~~t~~~~~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~ 500 (738)
T 2d73_A 421 KEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADY 500 (738)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTBHHHHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHc
Confidence 689999999999999996322 23567778999999999988 77888888888888888
Q ss_pred Cc
Q 028497 203 GF 204 (208)
Q Consensus 203 ~~ 204 (208)
+.
T Consensus 501 ~L 502 (738)
T 2d73_A 501 KI 502 (738)
T ss_dssp TC
T ss_pred Cc
Confidence 73
No 42
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=91.19 E-value=1.1 Score=34.94 Aligned_cols=57 Identities=14% Similarity=0.154 Sum_probs=34.7
Q ss_pred HHHHHHHhC--CCeEEEeeCCC-------HHHHHHHHhCCCCEEEcC-ChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR--NKRVFAWTVDD-------EDSMRKMLHERVDAVVTS-NPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~-------~~~~~~~~~~gvd~i~TD-~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
++++.+++. ++++.+-+..+ +..++.+.+.|+||++.- -|. +-..+....|.+.|..
T Consensus 83 ~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~---ee~~~~~~~~~~~gl~ 149 (262)
T 2ekc_A 83 ELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPP---EEAEELKAVMKKYVLS 149 (262)
T ss_dssp HHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCH---HHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCH---HHHHHHHHHHHHcCCc
Confidence 446666665 78887743222 456677889999987763 332 3344555666666643
No 43
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.55 E-value=3.6 Score=33.07 Aligned_cols=105 Identities=13% Similarity=0.152 Sum_probs=63.1
Q ss_pred HHHHHHhcCCcceEEEe-eCHHH----HHHHHhhccCCeEEEEEEe-cCCCchhhhHhhhhcCceEeecccccCHHHHHH
Q 028497 77 ILSVIERTKCYNCLVWA-KSDNL----VRDIMRLSSNVTAGYIIMV-DPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRT 150 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~S-f~~~~----l~~l~~~~p~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 150 (208)
++..+.+.|.-..+... .+++. ++.+++. .+.+++..... .|......+.....+++++.+.... .+++++.
T Consensus 42 la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~-~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~-p~~~~~~ 119 (326)
T 3bo9_A 42 LAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQK-TDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN-PTKYIRE 119 (326)
T ss_dssp HHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTT-CSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-CHHHHHH
T ss_pred HHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-cCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-cHHHHHH
Confidence 44555666642333222 24443 3344443 23456554432 2321111122334788887765543 4788999
Q ss_pred HHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 151 FHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 151 ~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+++.|+++.+ .+.+.++++++.+.|+|+|+.+.
T Consensus 120 l~~~g~~v~~-~v~s~~~a~~a~~~GaD~i~v~g 152 (326)
T 3bo9_A 120 LKENGTKVIP-VVASDSLARMVERAGADAVIAEG 152 (326)
T ss_dssp HHHTTCEEEE-EESSHHHHHHHHHTTCSCEEEEC
T ss_pred HHHcCCcEEE-EcCCHHHHHHHHHcCCCEEEEEC
Confidence 9999999875 66788899999999999998854
No 44
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=90.41 E-value=5.4 Score=31.50 Aligned_cols=134 Identities=8% Similarity=0.038 Sum_probs=77.9
Q ss_pred eEEEEeecCCCCCchhHHHHHHHHHHhcCCc-ce-EE-Eee-----C-HHHHHHHHhhc-cCCeEEEEEEecCCCchhhh
Q 028497 57 KVILDAKVGPPSYEKGLAKDILSVIERTKCY-NC-LV-WAK-----S-DNLVRDIMRLS-SNVTAGYIIMVDPSTGFRTN 126 (208)
Q Consensus 57 ~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~-~~-ii-~Sf-----~-~~~l~~l~~~~-p~~~~~~l~~~~~~~~~~~~ 126 (208)
.+.|.+-..... .+.+.+.+.+++++++.. ++ ++ ++- + ......++++. -++++++--.. .+ ++...
T Consensus 116 ~lsiNls~~~l~-~~~~~~~l~~~l~~~~~~~~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ialDDFG-tG-~ssl~ 192 (294)
T 2r6o_A 116 TLSVNISTRQFE-GEHLTRAVDRALARSGLRPDCLELEITENVMLVMTDEVRTCLDALRARGVRLALDDFG-TG-YSSLS 192 (294)
T ss_dssp CEEEEECGGGGG-GGHHHHHHHHHHHHHCCCGGGEEEEEEGGGGGGCCHHHHHHHHHHHHHTCEEEEEEET-SS-CBCHH
T ss_pred EEEEEeCHHHhC-CcHHHHHHHHHHHHcCCCcCEEEEEEeCCchhhChHHHHHHHHHHHHCCCEEEEECCC-CC-chhHH
Confidence 455554433211 136788888899999863 33 33 221 1 22333333321 35566533211 11 11123
Q ss_pred HhhhhcCceEeeccccc------------CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC---ChHHHHHH
Q 028497 127 LLRIRKAGVVGVYHPLI------------DEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS---NPILFQRV 191 (208)
Q Consensus 127 ~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD---~P~~~~~~ 191 (208)
+.+...++++-+...++ -..++..++..|++|.+=+|.++++++.+.++|++.++-- .|..+.++
T Consensus 193 ~L~~l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEGVEt~~q~~~l~~lG~d~~QGy~~~~P~~~~~~ 272 (294)
T 2r6o_A 193 YLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLMSTPQAADAF 272 (294)
T ss_dssp HHHHSCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHTTCCEECSTTTCCCEEHHHH
T ss_pred HHHhCCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEecCCcHHHHHHHHHcCCCEEEcCccCCCCCHHHH
Confidence 33445666665532211 1346778899999999999999999999999999998876 46555544
Q ss_pred HH
Q 028497 192 MQ 193 (208)
Q Consensus 192 ~~ 193 (208)
.+
T Consensus 273 ~~ 274 (294)
T 2r6o_A 273 AS 274 (294)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 45
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=90.41 E-value=4 Score=35.11 Aligned_cols=109 Identities=15% Similarity=0.032 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhcCCcceEEEeeCH------HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec------c
Q 028497 73 LAKDILSVIERTKCYNCLVWAKSD------NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY------H 140 (208)
Q Consensus 73 ~~~~v~~~l~~~~~~~~ii~Sf~~------~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~ 140 (208)
..+.+. .+.+.|..-.++-+.+. +.++++++..|++++..---. .......+...|++++.+- +
T Consensus 257 ~~era~-aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~---t~e~a~~~~~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 257 AMTRID-ALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA---TAEATKALIEAGANVVKVGIGPGSIC 332 (511)
T ss_dssp HHHHHH-HHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC---SHHHHHHHHHHTCSEEEECSSCSTTC
T ss_pred hHHHHH-HHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeec---cHHHHHHHHHhCCCEEEECCCCcccc
Confidence 344444 34455754444544433 578888888888777532111 1111122234788877531 0
Q ss_pred ----------cccC--HHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 141 ----------PLID--EKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 141 ----------~~~~--~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
+.++ .+..+.++..+++|.+= ++.+..++.+++.+|+++++.-.+
T Consensus 333 ~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vGs~ 390 (511)
T 3usb_A 333 TTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLGSM 390 (511)
T ss_dssp CHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred ccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheecHH
Confidence 0111 12233456678998874 688999999999999999987654
No 46
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=89.15 E-value=3.9 Score=32.81 Aligned_cols=53 Identities=17% Similarity=0.035 Sum_probs=42.7
Q ss_pred hhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 129 RIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
...|++++.++... ..++++.+++.|+++.. .+.+.++...+.+.|+|+|+.+
T Consensus 93 ~~~g~d~V~~~~g~-p~~~~~~l~~~gi~vi~-~v~t~~~a~~~~~~GaD~i~v~ 145 (328)
T 2gjl_A 93 IEAGIRVVETAGND-PGEHIAEFRRHGVKVIH-KCTAVRHALKAERLGVDAVSID 145 (328)
T ss_dssp HHTTCCEEEEEESC-CHHHHHHHHHTTCEEEE-EESSHHHHHHHHHTTCSEEEEE
T ss_pred HhcCCCEEEEcCCC-cHHHHHHHHHcCCCEEe-eCCCHHHHHHHHHcCCCEEEEE
Confidence 34788888766543 47889999999999874 5678889999999999999884
No 47
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.04 E-value=1.2 Score=36.54 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=44.5
Q ss_pred hhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 129 RIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
...+++++.++....+++.++.+++.|+++.+ .+.+.++++.+.+.|+|+|+.+
T Consensus 119 ~~~g~~~V~~~~g~~~~~~i~~~~~~g~~v~~-~v~t~~~a~~a~~~GaD~i~v~ 172 (369)
T 3bw2_A 119 LDDPVPVVSFHFGVPDREVIARLRRAGTLTLV-TATTPEEARAVEAAGADAVIAQ 172 (369)
T ss_dssp HHSCCSEEEEESSCCCHHHHHHHHHTTCEEEE-EESSHHHHHHHHHTTCSEEEEE
T ss_pred HhcCCCEEEEeCCCCcHHHHHHHHHCCCeEEE-ECCCHHHHHHHHHcCCCEEEEe
Confidence 34788888877665568899999999998766 6678889999999999999774
No 48
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.41 E-value=6.3 Score=29.38 Aligned_cols=108 Identities=10% Similarity=0.077 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeE-EEEEEecCC--C---chhh--hHhhhhcCceEeeccccc
Q 028497 72 GLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTA-GYIIMVDPS--T---GFRT--NLLRIRKAGVVGVYHPLI 143 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~-~~l~~~~~~--~---~~~~--~~~~~~~~~~~~~~~~~~ 143 (208)
.....+++.+.+.|..-..+ .+++.++.+++.. ++|+ +......+. . .... ......|++++.+.....
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~--~~~~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~ 99 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRA--NTKEDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQ 99 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEE--ESHHHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCS
T ss_pred ccHHHHHHHHHHCCCeeecc--CCHHHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecc
Confidence 44455666666667532222 4677888888863 5565 211110000 0 0001 122347888877654322
Q ss_pred -C-----HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 144 -D-----EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 144 -~-----~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+ .++++.++++ |+.+.+ .+.+.+++.++.+.|+|.|.+.
T Consensus 100 ~~p~~~~~~~i~~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 100 QRPKETLDELVSYIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTT 146 (223)
T ss_dssp CCSSSCHHHHHHHHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECT
T ss_pred cCcccCHHHHHHHHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeC
Confidence 1 4789999988 888765 7788888999999999999764
No 49
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=88.36 E-value=7.2 Score=29.98 Aligned_cols=110 Identities=12% Similarity=0.057 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHhcCC-cceEEEee-------CH-HHHHHHHhh-ccCCeEEEEEEecCCCchhhhHhhhhcCceEeeccc
Q 028497 72 GLAKDILSVIERTKC-YNCLVWAK-------SD-NLVRDIMRL-SSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHP 141 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~-~~~ii~Sf-------~~-~~l~~l~~~-~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (208)
.+...+.+++++++. ..++++.. +. .....++++ .-++++++--.. .. +..........++++-+...
T Consensus 120 ~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDDfG-~g-~ssl~~L~~l~~d~iKiD~~ 197 (268)
T 3hv8_A 120 GLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFG-CS-LNPFNALKHLTVQFIKIDGS 197 (268)
T ss_dssp THHHHHHHHHHHHTCCSSCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEET-CS-SSTTGGGGTCCCSEEEECGG
T ss_pred hHHHHHHHHHHHcCCChhhEEEEEEcHHHHhCHHHHHHHHHHHHHCCCEEEEeCCC-CC-hHHHHHHHhCCCCEEEECHH
Confidence 677888899999886 34443332 11 122223332 235666543211 11 11112223345666655433
Q ss_pred ccC-----------HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 142 LID-----------EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 142 ~~~-----------~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
++. ..++..++..|+.+.+=+|.++++++.+.++|++.++-.
T Consensus 198 ~v~~~~~~~~~~~l~~ii~~~~~~~~~viaeGVEt~~~~~~l~~lG~~~~QG~ 250 (268)
T 3hv8_A 198 FVQDLNQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGY 250 (268)
T ss_dssp GGSSTTSHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHTCSEECST
T ss_pred HHHhhhcChhHHHHHHHHHHHHHcCCCEEEEeeCCHHHHHHHHHcCCCEeccC
Confidence 221 345777899999999999999999999999999988755
No 50
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=87.68 E-value=6.8 Score=28.91 Aligned_cols=137 Identities=12% Similarity=0.052 Sum_probs=76.9
Q ss_pred HHHHHHhcC--CceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeC-----HHHHHHHHhhccCCeEEEEEEec
Q 028497 46 DALTLVSNS--VRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKS-----DNLVRDIMRLSSNVTAGYIIMVD 118 (208)
Q Consensus 46 evL~~~~~~--~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~-----~~~l~~l~~~~p~~~~~~l~~~~ 118 (208)
++++.+++. +.++++++|.... .+..++...+.|....++.... .+.++.+++. +.+++.-+ ..
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~------~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~--g~~~~v~~-~~ 112 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDG------GHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA--GKQVVVDM-IC 112 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSC------HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH--TCEEEEEC-TT
T ss_pred HHHHHHHHhCCCCEEEEEEEeccc------hHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc--CCeEEEEe-cC
Confidence 344444432 3578899998631 2334566677787655565443 2234444443 45554311 23
Q ss_pred CCCchhhhH--hhhhcCceEeeccc-------ccCHHHHHHHHhC--CCeEEE-eeCCCHHHHHHHHhCCCCEEEc----
Q 028497 119 PSTGFRTNL--LRIRKAGVVGVYHP-------LIDEKLVRTFHGR--NKRVFA-WTVDDEDSMRKMLHERVDAVVT---- 182 (208)
Q Consensus 119 ~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~v~~~~~~--g~~v~~-wtv~~~~~~~~~~~~gvd~i~T---- 182 (208)
|++.. ..+ +...|++++.+... ....+.++.+++. ++++.+ -+++ .+.+..+.+.|+|+++.
T Consensus 113 ~~t~~-~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai 190 (211)
T 3f4w_A 113 VDDLP-ARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALLGPDVVIVGSAI 190 (211)
T ss_dssp CSSHH-HHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTTCCSEEEECHHH
T ss_pred CCCHH-HHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHcCCCEEEECHHH
Confidence 43321 112 23367887765321 1245677777764 677755 4565 88999999999999875
Q ss_pred ---CChHHHHHHHH
Q 028497 183 ---SNPILFQRVMQ 193 (208)
Q Consensus 183 ---D~P~~~~~~~~ 193 (208)
++|....+.++
T Consensus 191 ~~~~d~~~~~~~l~ 204 (211)
T 3f4w_A 191 THAADPAGEARKIS 204 (211)
T ss_dssp HTCSSHHHHHHHHH
T ss_pred cCCCCHHHHHHHHH
Confidence 35655544443
No 51
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=86.62 E-value=7.9 Score=29.42 Aligned_cols=68 Identities=7% Similarity=0.045 Sum_probs=45.4
Q ss_pred EeeCHHHHHHHHhhc-cCCeEEE-EEEecCCCchhhhHhhhhcCceEeecccccC--HHHHHHHHhCCCeEEEe
Q 028497 92 WAKSDNLVRDIMRLS-SNVTAGY-IIMVDPSTGFRTNLLRIRKAGVVGVYHPLID--EKLVRTFHGRNKRVFAW 161 (208)
Q Consensus 92 ~Sf~~~~l~~l~~~~-p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~g~~v~~w 161 (208)
.+|.+..++.+|+.. |+.++-. ++-.+|..+ ...+ ...|++++.++..... .+.++.++++|+++.+-
T Consensus 47 ~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~-i~~~-~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gva 118 (228)
T 3ovp_A 47 ITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQW-VKPM-AVAGANQYTFHLEATENPGALIKDIRENGMKVGLA 118 (228)
T ss_dssp BCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGG-HHHH-HHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEE
T ss_pred cccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHH-HHHH-HHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEE
Confidence 467888999999885 7777653 343344332 2334 3389998887654322 36788999999987663
No 52
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=86.41 E-value=7.9 Score=31.75 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=47.0
Q ss_pred HHHHHHHhC---CCeEEEe-eCCCHHHHHHHHhCCCCEEE------cCChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR---NKRVFAW-TVDDEDSMRKMLHERVDAVV------TSNPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~w-tv~~~~~~~~~~~~gvd~i~------TD~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+.+..++++ .++|..- ++.+.+++.+++..|+|+|. .+.|..+.++.+++...+.+.|+.
T Consensus 286 ~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~~~m~~~G~~ 355 (367)
T 3zwt_A 286 QTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFG 355 (367)
T ss_dssp HHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHHHHHHHcCCC
Confidence 456666543 5787654 68899999999999999998 456888888888888888888863
No 53
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.41 E-value=12 Score=30.27 Aligned_cols=55 Identities=5% Similarity=0.119 Sum_probs=41.3
Q ss_pred HHHHHHHHhCCCeEEEeeCC-------CH----HHHHHHHhCCCCEE-EcC-----ChHHHHHHHHHHHhhh
Q 028497 145 EKLVRTFHGRNKRVFAWTVD-------DE----DSMRKMLHERVDAV-VTS-----NPILFQRVMQDIRTQC 199 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~-------~~----~~~~~~~~~gvd~i-~TD-----~P~~~~~~~~~~~~~~ 199 (208)
.+.++.+++.|+.|.+...+ +. +.++.+.++|++.| +.| .|..+.++++..+...
T Consensus 140 ~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 140 SFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp HHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhc
Confidence 35678889999999877654 23 24666778999998 555 7999999998876544
No 54
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=86.25 E-value=6.4 Score=29.98 Aligned_cols=85 Identities=7% Similarity=0.121 Sum_probs=56.2
Q ss_pred EeeCHHHHHHHHhhccCCeEEE-EEEecCCCchhhhHhhhhcCceEeecccccC---HHHHH---HHHhCCCeEEEee-C
Q 028497 92 WAKSDNLVRDIMRLSSNVTAGY-IIMVDPSTGFRTNLLRIRKAGVVGVYHPLID---EKLVR---TFHGRNKRVFAWT-V 163 (208)
Q Consensus 92 ~Sf~~~~l~~l~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~---~~~~~g~~v~~wt-v 163 (208)
.||-+..++.+|+..|+.++-. ++-.+|..+. ..+.+ ++++.++....+ ...++ .++++|+++.+=. .
T Consensus 48 ~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i-~~~~~---Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp 123 (227)
T 1tqx_A 48 LSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYV-PLLKT---SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKP 123 (227)
T ss_dssp BCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGG-GGCTT---SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred hhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHH-HHHHh---CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 4677889999999887777643 3323443222 23333 787776654332 46788 9999999988754 2
Q ss_pred CC-HHHHHHHHhCC-CCEE
Q 028497 164 DD-EDSMRKMLHER-VDAV 180 (208)
Q Consensus 164 ~~-~~~~~~~~~~g-vd~i 180 (208)
.+ .+.++.++.+| +|.|
T Consensus 124 ~tp~~~~~~~l~~g~~D~V 142 (227)
T 1tqx_A 124 KTDVQKLVPILDTNLINTV 142 (227)
T ss_dssp TSCGGGGHHHHTTTCCSEE
T ss_pred CCcHHHHHHHhhcCCcCEE
Confidence 23 45677888876 9988
No 55
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=85.99 E-value=9.1 Score=32.71 Aligned_cols=107 Identities=11% Similarity=0.010 Sum_probs=63.2
Q ss_pred HHHHHHHHHhcCCcceEEEeeC------HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec------c-
Q 028497 74 AKDILSVIERTKCYNCLVWAKS------DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY------H- 140 (208)
Q Consensus 74 ~~~v~~~l~~~~~~~~ii~Sf~------~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~- 140 (208)
.+.+..++ +.|..-..+-+.+ .+.++++++..|++++..-.-. .......+...|++++.+. .
T Consensus 233 ~~~a~~l~-~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~---t~e~a~~l~~aGaD~I~Vg~g~Gs~~~ 308 (496)
T 4fxs_A 233 EERVKALV-EAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVA---TAEGARALIEAGVSAVKVGIGPGSICT 308 (496)
T ss_dssp HHHHHHHH-HTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEEC---SHHHHHHHHHHTCSEEEECSSCCTTBC
T ss_pred HHHHHHHH-hccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccC---cHHHHHHHHHhCCCEEEECCCCCcCcc
Confidence 44444444 4465434443322 1578888888888887542111 1111122234788877542 1
Q ss_pred ---------cccC--HHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcCC
Q 028497 141 ---------PLID--EKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 141 ---------~~~~--~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.++ .+..+.++..+++|.+= ++.+..++.+++.+|+++++.-.
T Consensus 309 tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs 364 (496)
T 4fxs_A 309 TRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGS 364 (496)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred cccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecH
Confidence 0000 23344555678998775 68899999999999999998653
No 56
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=85.85 E-value=8.8 Score=28.38 Aligned_cols=53 Identities=15% Similarity=0.114 Sum_probs=41.4
Q ss_pred HhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 127 LLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.+...|++++.. ...+.++++.+++.|.++.+- +.+..++..+...|+|.|..
T Consensus 75 ~a~~~Gad~V~~--~~~~~~~~~~~~~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 75 ALARMGCQLIVT--PNIHSEVIRRAVGYGMTVCPG-CATATEAFTALEAGAQALKI 127 (212)
T ss_dssp HHHHTTCCEEEC--SSCCHHHHHHHHHTTCEEECE-ECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHcCCCEEEe--CCCCHHHHHHHHHcCCCEEee-cCCHHHHHHHHHCCCCEEEE
Confidence 334578898763 335678889999999887543 78888999999999999986
No 57
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=85.67 E-value=5.2 Score=32.77 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=51.1
Q ss_pred HHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccC-H---HHHHHHHhC-CCeEEEeeCCCHHHHHHHH
Q 028497 99 VRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLID-E---KLVRTFHGR-NKRVFAWTVDDEDSMRKML 173 (208)
Q Consensus 99 l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~v~~~~~~-g~~v~~wtv~~~~~~~~~~ 173 (208)
++++++ .++.+++......+ ....+..-..|++++.++...-. . +.++.+++. +++|.+-++.+.+.++.+.
T Consensus 87 I~~vk~-~~~~pvga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~ 163 (361)
T 3khj_A 87 VLKVKN-SGGLRVGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELI 163 (361)
T ss_dssp HHHHHH-TTCCCCEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHH
T ss_pred HHHHHh-ccCceEEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHH
Confidence 334443 35677776664322 11111223368888776433222 2 456666654 8999887888999999999
Q ss_pred hCCCCEEEc
Q 028497 174 HERVDAVVT 182 (208)
Q Consensus 174 ~~gvd~i~T 182 (208)
+.|+|+|..
T Consensus 164 ~aGaD~I~V 172 (361)
T 3khj_A 164 ENGADGIKV 172 (361)
T ss_dssp HTTCSEEEE
T ss_pred HcCcCEEEE
Confidence 999999985
No 58
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=85.25 E-value=3.9 Score=30.40 Aligned_cols=49 Identities=14% Similarity=0.208 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCCeEEEee------CCCHHHHHHHHh-CCCCEEEcCChHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAWT------VDDEDSMRKMLH-ERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt------v~~~~~~~~~~~-~gvd~i~TD~P~~~~~~~~ 193 (208)
++.++.++++|..+++.. -+++..+.++.. .++|||||=++..+..+.+
T Consensus 44 ~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~ 99 (192)
T 3kts_A 44 KALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQ 99 (192)
T ss_dssp HHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHH
Confidence 788999999999999853 246777777776 4899999999999886553
No 59
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=84.83 E-value=16 Score=30.49 Aligned_cols=136 Identities=4% Similarity=-0.067 Sum_probs=74.8
Q ss_pred HHHHHHHhc--CCceEEEEeecCCCCCchhHHHH--HHHHHHhcCCc-ce-EE-Eee-----CHH-HHHHHHhh-ccCCe
Q 028497 45 EDALTLVSN--SVRKVILDAKVGPPSYEKGLAKD--ILSVIERTKCY-NC-LV-WAK-----SDN-LVRDIMRL-SSNVT 110 (208)
Q Consensus 45 ~evL~~~~~--~~~~l~lEiK~~~~~~~~~~~~~--v~~~l~~~~~~-~~-ii-~Sf-----~~~-~l~~l~~~-~p~~~ 110 (208)
+.++..+.. ....+.|.+-..... ...+... +.+++++++.. ++ ++ ++- +.+ ....++++ .-+++
T Consensus 94 ~~a~~~~~~~~~~~~l~iNls~~~l~-~~~~~~~~~l~~~l~~~~~~~~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ 172 (431)
T 2bas_A 94 RQALDRFLEADSDLLIFMNQDANLLM-LDHGESFLELLKEYEAKGIELHRFVLEITEHNFEGDIEQLYHMLAYYRTYGIK 172 (431)
T ss_dssp HHHHHHHTTSCTTCEEEEECCHHHHG-GGTTHHHHHHHHHHHHTTCCGGGEEEEECCTTCCSCHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHhcCCCCeEEEEECHHHHC-CcccccHHHHHHHHHHcCCCCCeEEEEEECChhhCCHHHHHHHHHHHHHCCCE
Confidence 344444442 223455555432211 1245555 78888999863 33 33 221 222 33333333 23566
Q ss_pred EEEEEEecCCCchhhhHhhhhcCceEeecccccC------------HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCC
Q 028497 111 AGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLID------------EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVD 178 (208)
Q Consensus 111 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd 178 (208)
+++--.. .+ ++.-.......++++-+...++. ..++..++..|++|.+=+|.++++++.+.++|++
T Consensus 173 ialDDFG-~g-~ssl~~L~~l~~d~iKID~s~v~~~~~~~~~~~il~~ii~la~~lg~~vvAEGVEt~~q~~~l~~lG~d 250 (431)
T 2bas_A 173 IAVDNIG-KE-SSNLDRIALLSPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGR 250 (431)
T ss_dssp EEEEEET-TT-BCCHHHHHHHCCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHTTEE
T ss_pred EEEECCC-CC-cHHHHHHHhCCCCEEEECHHHHhhhhcCHhHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHcCCC
Confidence 6543211 11 11112223355666655433221 3456678999999999999999999999999999
Q ss_pred EEEcC
Q 028497 179 AVVTS 183 (208)
Q Consensus 179 ~i~TD 183 (208)
.++--
T Consensus 251 ~~QGy 255 (431)
T 2bas_A 251 YFQGY 255 (431)
T ss_dssp EECST
T ss_pred EEeeC
Confidence 87643
No 60
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=84.68 E-value=1.3 Score=39.29 Aligned_cols=59 Identities=15% Similarity=0.149 Sum_probs=46.9
Q ss_pred HHHHHHHHhCCCeEEEeeC-----CC-HHHHHHHHhCCCCEEEcCChH----HHHHHHHHHHhhhhhcC
Q 028497 145 EKLVRTFHGRNKRVFAWTV-----DD-EDSMRKMLHERVDAVVTSNPI----LFQRVMQDIRTQCLEEG 203 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv-----~~-~~~~~~~~~~gvd~i~TD~P~----~~~~~~~~~~~~~~~~~ 203 (208)
+++++++|++|+++.+|.- +. ++.++.+.++||+||=+|+.. .+.++..+....|.+.|
T Consensus 350 ~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~Q~~v~~y~~i~~~aA~~~ 418 (641)
T 3a24_A 350 KELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYK 418 (641)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHHHHcC
Confidence 6899999999999999963 22 347888889999999999653 56666667777887777
No 61
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=84.47 E-value=4.7 Score=32.42 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=62.0
Q ss_pred HHHHHHhcCCcceEEEe-eCHHH----HHHHHhhccCCeEEEEEEe-cCCCchhhhHhhhhcCceEeecccccCHHHHHH
Q 028497 77 ILSVIERTKCYNCLVWA-KSDNL----VRDIMRLSSNVTAGYIIMV-DPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRT 150 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~S-f~~~~----l~~l~~~~p~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 150 (208)
++..+.+.|.-..+... .+.+. ++.+++. .+.++++.... .|......+.....|++++.++.. ...++++.
T Consensus 28 la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~-~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g-~p~~~i~~ 105 (332)
T 2z6i_A 28 LAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL-TDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAG-NPSKYMER 105 (332)
T ss_dssp HHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH-CCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSS-CGGGTHHH
T ss_pred HHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-cCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCC-ChHHHHHH
Confidence 44555566642333222 24432 4445543 34556654432 232111112334478888876554 34678889
Q ss_pred HHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 151 FHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 151 ~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+++.|+++.+ .+.+.+.++.+.+.|+|+|+.+
T Consensus 106 l~~~g~~v~~-~v~~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 106 FHEAGIIVIP-VVPSVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp HHHTTCEEEE-EESSHHHHHHHHHTTCSCEEEE
T ss_pred HHHcCCeEEE-EeCCHHHHHHHHHcCCCEEEEE
Confidence 9999998874 4578888999999999999885
No 62
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=84.33 E-value=4.8 Score=31.04 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=42.7
Q ss_pred hHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 126 NLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+++...|++.++.....+....++.+...+..+.+ ++++.+++.++.+.|+|.|...
T Consensus 106 ~lA~~~gAdGVHLg~~dl~~~~~r~~~~~~~~iG~-S~ht~~Ea~~A~~~GaDyI~vg 162 (243)
T 3o63_A 106 DIARAAGADVLHLGQRDLPVNVARQILAPDTLIGR-STHDPDQVAAAAAGDADYFCVG 162 (243)
T ss_dssp HHHHHHTCSEEEECTTSSCHHHHHHHSCTTCEEEE-EECSHHHHHHHHHSSCSEEEEC
T ss_pred HHHHHhCCCEEEecCCcCCHHHHHHhhCCCCEEEE-eCCCHHHHHHHhhCCCCEEEEc
Confidence 45566889988876666666666666656666555 5688889999999999999764
No 63
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=84.20 E-value=3.6 Score=30.48 Aligned_cols=49 Identities=16% Similarity=0.279 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCeEEEee-----C-CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAWT-----V-DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt-----v-~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
++.++.++++|++|++.. + .++..+..+-..++|||||=++..+..+.+
T Consensus 46 ~~iv~~ik~~gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsTk~~~i~~Akk 100 (188)
T 1vkf_A 46 KFHLKILKDRGKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITIKPKNYVVAKK 100 (188)
T ss_dssp HHHHHHHHHTTCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcCcHHHHHHHHH
Confidence 688999999999999974 2 467888888666999999999999886653
No 64
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=84.01 E-value=3.6 Score=31.47 Aligned_cols=65 Identities=12% Similarity=0.147 Sum_probs=47.8
Q ss_pred hcCceEeeccc--ccCHHHHHHHHhC--CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHHH
Q 028497 131 RKAGVVGVYHP--LIDEKLVRTFHGR--NKRVFA-WTVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDIR 196 (208)
Q Consensus 131 ~~~~~~~~~~~--~~~~~~v~~~~~~--g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~~ 196 (208)
.|.+++...+. ..+.++++.+++. ++++.+ .+++++++++++. .|+|+|+.. +|+.+.++++..+
T Consensus 152 ~g~~~VYld~sG~~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 152 LQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDFDRALKTVAAVK 226 (228)
T ss_dssp TTCSEEEEECTTSCCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCHHHHHHHHHHHH
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCHHHHHHHHHHHh
Confidence 45565544332 2367889998875 578865 5789999999998 699999876 7888888777554
No 65
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=83.96 E-value=3 Score=31.28 Aligned_cols=57 Identities=12% Similarity=0.066 Sum_probs=43.2
Q ss_pred hHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 126 NLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.....|++.+.+.........++.... |+.+.+ ++++.+++..+...|+|+|..+.
T Consensus 82 ~~a~~~gad~v~l~~~~~~~~~~~~~~~-~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGSFSPKQIRARFP-HLHIGR-SVHSLEEAVQAEKEDADYVLFGH 138 (221)
T ss_dssp HHHHTTTCCEEEECTTSCCHHHHHHHCT-TCEEEE-EECSHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHcCCCEEEeCCCccCHHHHHHHCC-CCEEEE-EcCCHHHHHHHHhCCCCEEEECC
Confidence 4445588998887765556666666654 777665 78899999999999999998753
No 66
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=83.43 E-value=18 Score=29.91 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHhcCCc-ceEEEee-------CHH-HHHHHHhhc-cCCeEEEEEEecCCCchhhhHhhhhcCceEeeccc
Q 028497 72 GLAKDILSVIERTKCY-NCLVWAK-------SDN-LVRDIMRLS-SNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHP 141 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~-~~ii~Sf-------~~~-~l~~l~~~~-p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (208)
.+...+.+++++++.. +++++.. +.. ....++++. -++++++--. ..+ ++.-...+...++++-+...
T Consensus 289 ~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~l~~~G~~ialDDf-G~g-~ssl~~L~~l~~d~iKiD~~ 366 (437)
T 3hvb_A 289 GLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQF-GCS-LNPFNALKHLTVQFIKIDGS 366 (437)
T ss_dssp THHHHHHHHHHTTTCCTTCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEE-TCS-SSHHHHHTTSCCSEEEECGG
T ss_pred hHHHHHHHHHHHcCCChhhEEEEEEchhhhhCHHHHHHHHHHHHHCCCEEEEcCC-CCC-ccHHHHHhhCCCCEEEECHH
Confidence 6778888899998863 4443322 212 222233321 3455543321 111 11122223355666655433
Q ss_pred ccC-----------HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 142 LID-----------EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 142 ~~~-----------~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
++. ..++..++..|+.+.+=+|.++++++.+.++|++.++-.
T Consensus 367 ~i~~~~~~~~~~~~~~~i~~~~~~~~~viaegVEt~~~~~~l~~~G~~~~QG~ 419 (437)
T 3hvb_A 367 FVQDLNQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGY 419 (437)
T ss_dssp GSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHTCSEEECT
T ss_pred HHHhHhhCcHHHHHHHHHHHHHHcCCCEEeeeeCCHHHHHHHHHcCCCEeccc
Confidence 221 345777899999999999999999999999999998765
No 67
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=82.91 E-value=1.8 Score=33.77 Aligned_cols=37 Identities=8% Similarity=0.092 Sum_probs=24.0
Q ss_pred HHHHHHHhC--CCeEEEee-CC------CHHHHHHHHhCCCCEEEc
Q 028497 146 KLVRTFHGR--NKRVFAWT-VD------DEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wt-v~------~~~~~~~~~~~gvd~i~T 182 (208)
+.++.+++. .+++.+-+ .| ....++.+.+.|+|||+.
T Consensus 83 ~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~ 128 (268)
T 1qop_A 83 EMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLV 128 (268)
T ss_dssp HHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEE
Confidence 557777765 57776522 12 146678888999996654
No 68
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=82.45 E-value=2.2 Score=33.99 Aligned_cols=86 Identities=7% Similarity=0.018 Sum_probs=57.4
Q ss_pred CHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHh--CCCeEEEeeCCCHHHHHHH
Q 028497 95 SDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHG--RNKRVFAWTVDDEDSMRKM 172 (208)
Q Consensus 95 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~g~~v~~wtv~~~~~~~~~ 172 (208)
+++.++++++. -++|+........ ..........|++.+........+++++.+++ .|+.+.+ .+.+.++..+.
T Consensus 66 ~~~~i~~i~~~-v~iPvl~k~~i~~--ide~qil~aaGAD~Id~s~~~~~~~li~~i~~~~~g~~vvv-~v~~~~Ea~~a 141 (297)
T 4adt_A 66 DPLKIEEIRKC-ISINVLAKVRIGH--FVEAQILEELKVDMLDESEVLTMADEYNHINKHKFKTPFVC-GCTNLGEALRR 141 (297)
T ss_dssp CHHHHHHHHTT-CCSEEEEEEETTC--HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEE-EESSHHHHHHH
T ss_pred CHHHHHHHHHh-cCCCEEEeccCCc--HHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHhcCCCCeEEE-EeCCHHHHHHH
Confidence 57888888875 3688854432211 11122334589998832222234567777777 5677766 78899999999
Q ss_pred HhCCCCEEEcCC
Q 028497 173 LHERVDAVVTSN 184 (208)
Q Consensus 173 ~~~gvd~i~TD~ 184 (208)
++.|++.|.++.
T Consensus 142 ~~~Gad~I~v~g 153 (297)
T 4adt_A 142 ISEGASMIRTKG 153 (297)
T ss_dssp HHHTCSEEEECC
T ss_pred HhCCCCEEEECC
Confidence 999999999983
No 69
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=82.37 E-value=18 Score=29.12 Aligned_cols=134 Identities=13% Similarity=0.061 Sum_probs=77.5
Q ss_pred eEEEEeecCCCCCchhHHHHHHHHHHhcCCc-ceEEEee-------CHH-HHHHHHhh-ccCCeEEEEEEecCCCc-hhh
Q 028497 57 KVILDAKVGPPSYEKGLAKDILSVIERTKCY-NCLVWAK-------SDN-LVRDIMRL-SSNVTAGYIIMVDPSTG-FRT 125 (208)
Q Consensus 57 ~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~-~~ii~Sf-------~~~-~l~~l~~~-~p~~~~~~l~~~~~~~~-~~~ 125 (208)
.+.+-+-...... ..+...+.+.+++++.. .++++-. +.. +...++++ .-++++++- +.+++ +.-
T Consensus 165 ~~svnls~~~l~~-~~~~~~~~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~Lr~~G~~ialD---DFGtG~ssl 240 (340)
T 4hjf_A 165 TVSVNLSTGEIDR-PGLVADVAETLRVNRLPRGALKLEVTESDIMRDPERAAVILKTLRDAGAGLALD---DFGTGFSSL 240 (340)
T ss_dssp EEEEECCTTCTTC-TTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHTSHHHHHHHHHHHHHHTCEEEEE---CTTSSSCGG
T ss_pred eeEEEcChHhhcC-chHHHHHHHHHHhhCCCcceEEEEeeccccccchHHHHHHHHHHHHcCCCcccc---CCCCCcchH
Confidence 4445444433222 47888899999999863 3333221 222 22223332 124555322 23321 111
Q ss_pred hHhhhhcCceEeecccc------------cCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC---Ch---HH
Q 028497 126 NLLRIRKAGVVGVYHPL------------IDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS---NP---IL 187 (208)
Q Consensus 126 ~~~~~~~~~~~~~~~~~------------~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD---~P---~~ 187 (208)
.+.+...++++-+...+ +-..++..+|..|++|.+=+|.++++++.+.++|+|.++-- .| +.
T Consensus 241 ~~L~~lp~d~iKID~sfv~~~~~~~~~~~iv~~ii~la~~lg~~vvAEGVEt~~q~~~L~~lG~d~~QGy~~~~P~~~~~ 320 (340)
T 4hjf_A 241 SYLTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYGQGFGYAPALSPQE 320 (340)
T ss_dssp GTGGGSCCSEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHTTCCEEESTTTCCSBCHHH
T ss_pred HHHHhCCCChhcccHHhhhcccCCHhHHHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHcCCCEeecCccccCCCHHH
Confidence 22333556665543221 11345777899999999999999999999999999998876 44 44
Q ss_pred HHHHHHH
Q 028497 188 FQRVMQD 194 (208)
Q Consensus 188 ~~~~~~~ 194 (208)
+.+++++
T Consensus 321 ~~~~l~~ 327 (340)
T 4hjf_A 321 AEVYLNE 327 (340)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4455544
No 70
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=82.33 E-value=14 Score=28.04 Aligned_cols=121 Identities=12% Similarity=0.055 Sum_probs=72.7
Q ss_pred eEEEEeecCCCCCchhHHHHHHHHHHhcCCc-ceEEEee-------CHH-H---HHHHHhhccCCeEEEEEEecCCC-ch
Q 028497 57 KVILDAKVGPPSYEKGLAKDILSVIERTKCY-NCLVWAK-------SDN-L---VRDIMRLSSNVTAGYIIMVDPST-GF 123 (208)
Q Consensus 57 ~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~-~~ii~Sf-------~~~-~---l~~l~~~~p~~~~~~l~~~~~~~-~~ 123 (208)
.+.|.+-...... +.+...+.+.+++++.. .++++.. +.. . ++.+++ -++++++- +.+. +.
T Consensus 92 ~l~iNls~~~l~~-~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~l~~--~G~~ialD---dfG~g~s 165 (259)
T 3s83_A 92 TVSVNLSTGEIDR-PGLVADVAETLRVNRLPRGALKLEVTESDIMRDPERAAVILKTLRD--AGAGLALD---DFGTGFS 165 (259)
T ss_dssp EEEEECCTTGGGS-TTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHHCHHHHHHHHHHHHH--HTCEEEEE---CC---CH
T ss_pred EEEEEcCHHHhCC-cHHHHHHHHHHHHcCCCcceEEEEECCchhhhCHHHHHHHHHHHHH--CCCEEEEE---CCCCCch
Confidence 4666555432211 36788899999998863 3443322 222 2 233333 34555432 2222 11
Q ss_pred hhhHhhhhcCceEeeccccc------------CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 124 RTNLLRIRKAGVVGVYHPLI------------DEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.........++++-+...++ -..++..+|..|++|.+=+|.++++++.+.++|++.++-.
T Consensus 166 sl~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeGVEt~~~~~~l~~lG~~~~QG~ 237 (259)
T 3s83_A 166 SLSYLTRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEGVENAEMAHALQSLGCDYGQGF 237 (259)
T ss_dssp HHHHHHHSCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHTCCEECBT
T ss_pred hHHHHHhCCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHhcCCCEeecC
Confidence 12233445567665543211 1345778899999999999999999999999999998877
No 71
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=82.33 E-value=2.9 Score=33.07 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=46.3
Q ss_pred hcCceEeecc--cccCHHHHHHHHhC---CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC-----C--hHHHHHHHHHH
Q 028497 131 RKAGVVGVYH--PLIDEKLVRTFHGR---NKRVFA-WTVDDEDSMRKMLHERVDAVVTS-----N--PILFQRVMQDI 195 (208)
Q Consensus 131 ~~~~~~~~~~--~~~~~~~v~~~~~~---g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD-----~--P~~~~~~~~~~ 195 (208)
.|.+++-... ...+.++++.+++. ++++.+ .++++.++++++++.|+|+|+.. + |+.+.++..+.
T Consensus 198 ~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv~e~a~~~ 275 (286)
T 3vk5_A 198 FGFHMVYLYSRNEHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSALAEIAGRR 275 (286)
T ss_dssp TTCSEEEEECSSSCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHHHHHHC--
T ss_pred cCCCEEEEcCCCCcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHHHHHHHhC
Confidence 4555554433 34567888887764 678766 47899999999999999999987 4 66666666444
No 72
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=82.14 E-value=6.3 Score=30.07 Aligned_cols=86 Identities=13% Similarity=0.194 Sum_probs=53.7
Q ss_pred EeeCHHHHHHHHhhccCCeEE-EEEEecCCCchhhhHhhhhcCceEeecccc-c--CHHHHHHHHhCCCeEEEee-CCCH
Q 028497 92 WAKSDNLVRDIMRLSSNVTAG-YIIMVDPSTGFRTNLLRIRKAGVVGVYHPL-I--DEKLVRTFHGRNKRVFAWT-VDDE 166 (208)
Q Consensus 92 ~Sf~~~~l~~l~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~v~~~~~~g~~v~~wt-v~~~ 166 (208)
.||-+..++.+|+.. +.++- -++-.+|..+. ..+ ...|++++.++... . -.+.++.++++|+++.+-. ..++
T Consensus 42 ~t~G~~~v~~lr~~~-~~~~dvhLmv~dp~~~i-~~~-~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp 118 (231)
T 3ctl_A 42 LTLSPFFVSQVKKLA-TKPLDCHLMVTRPQDYI-AQL-ARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETP 118 (231)
T ss_dssp CCBCHHHHHHHHTTC-CSCEEEEEESSCGGGTH-HHH-HHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred chhcHHHHHHHHhcc-CCcEEEEEEecCHHHHH-HHH-HHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCc
Confidence 467788899999863 44443 33333453322 233 44899998776544 2 2478899999999987643 2333
Q ss_pred -HHHHHHHhCCCCEEE
Q 028497 167 -DSMRKMLHERVDAVV 181 (208)
Q Consensus 167 -~~~~~~~~~gvd~i~ 181 (208)
+.++.++. ++|.|.
T Consensus 119 ~~~~~~~l~-~~D~Vl 133 (231)
T 3ctl_A 119 VEAMKYYIH-KADKIT 133 (231)
T ss_dssp GGGGTTTGG-GCSEEE
T ss_pred HHHHHHHHh-cCCEEE
Confidence 34454444 688875
No 73
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=80.89 E-value=5.4 Score=32.74 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=59.5
Q ss_pred HHHHHHHhcCCcceEEEeeCHH----HHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccc-cCH---HH
Q 028497 76 DILSVIERTKCYNCLVWAKSDN----LVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPL-IDE---KL 147 (208)
Q Consensus 76 ~v~~~l~~~~~~~~ii~Sf~~~----~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~ 147 (208)
.++..+.+.|.-..+-.+.+.+ .++.+++. ..+.++......+.....-+..-..|++++.+.... .++ +.
T Consensus 61 ~lA~avA~aGGlg~i~~~~s~e~~~~~i~~vk~~-~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~ 139 (366)
T 4fo4_A 61 RLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIS-GGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQR 139 (366)
T ss_dssp HHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHTT-TSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHH
T ss_pred HHHHHHHHcCCceEeecCCCHHHHHHHHHHHHhc-CceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHH
Confidence 4444555554312221234543 34455543 235555544322221111122233688887764322 123 34
Q ss_pred HHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 148 VRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 148 v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
++.++++ ++++.+-++.+.++++++.+.|+|+|..
T Consensus 140 I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 140 IRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEE
Confidence 6677766 7888887889999999999999999987
No 74
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=80.48 E-value=14 Score=28.08 Aligned_cols=65 Identities=17% Similarity=0.068 Sum_probs=45.2
Q ss_pred hhhcCceEeec---c------cccCHHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC----ChHHHHHHHH
Q 028497 129 RIRKAGVVGVY---H------PLIDEKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS----NPILFQRVMQ 193 (208)
Q Consensus 129 ~~~~~~~~~~~---~------~~~~~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD----~P~~~~~~~~ 193 (208)
...|++++... + ...+.++++.+++.+++|..= ++++++++.+++++|+++++-- +|....+.+.
T Consensus 146 ~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p~~~~~~~~ 224 (232)
T 3igs_A 146 QRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEHICGWYN 224 (232)
T ss_dssp HHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHHHHH
T ss_pred HhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCHHHHHHHHH
Confidence 34788888531 1 123457788887778888765 5789999999999999999743 3555444433
No 75
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=79.84 E-value=14 Score=27.76 Aligned_cols=86 Identities=9% Similarity=0.124 Sum_probs=52.8
Q ss_pred eeCHHHHHHHHhhccCCeEE--EEEEecCCCchhhhHhhhhcCceEeeccc--ccC-HHHHHHHHhCCCeEEEee-CCC-
Q 028497 93 AKSDNLVRDIMRLSSNVTAG--YIIMVDPSTGFRTNLLRIRKAGVVGVYHP--LID-EKLVRTFHGRNKRVFAWT-VDD- 165 (208)
Q Consensus 93 Sf~~~~l~~l~~~~p~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~v~~~~~~g~~v~~wt-v~~- 165 (208)
++..+.++.+++.. +.+.. +.. .+|..+ ...+.+ .|++++.++.. ... ...++.+++.|+++.+=. .++
T Consensus 50 ~~~~~~~~~lr~~~-~~~~~v~lmv-~d~~~~-i~~~~~-agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~t~ 125 (228)
T 1h1y_A 50 TIGAPVIQSLRKHT-KAYLDCHLMV-TNPSDY-VEPLAK-AGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTP 125 (228)
T ss_dssp CBCHHHHHHHHTTC-CSEEEEEEES-SCGGGG-HHHHHH-HTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred hhCHHHHHHHHhhc-CCcEEEEEEe-cCHHHH-HHHHHH-cCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 56678888898875 33333 333 334222 123333 89998866543 234 667899999999887533 123
Q ss_pred HHHHHHHHhC--CCCEEEc
Q 028497 166 EDSMRKMLHE--RVDAVVT 182 (208)
Q Consensus 166 ~~~~~~~~~~--gvd~i~T 182 (208)
.+.++.+... ++|.|..
T Consensus 126 ~e~~~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 126 VEEVFPLVEAENPVELVLV 144 (228)
T ss_dssp GGGGHHHHHSSSCCSEEEE
T ss_pred HHHHHHHHhcCCCCCEEEE
Confidence 3456666665 8998854
No 76
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=79.78 E-value=17 Score=27.24 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=76.2
Q ss_pred CHHHHHHHHhcCCceEEEEeecCC--CCCchh--HHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeE-EEEEEe
Q 028497 43 TIEDALTLVSNSVRKVILDAKVGP--PSYEKG--LAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTA-GYIIMV 117 (208)
Q Consensus 43 tL~evL~~~~~~~~~l~lEiK~~~--~~~~~~--~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~-~~l~~~ 117 (208)
+..++++.+++. +.+-+.... +.+... ....+++.+.+.|..-..+ .+++.++.+++.. ++|+ +++...
T Consensus 6 ~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~--~~~~~i~~i~~~~-~~p~i~~~~~~ 79 (234)
T 1yxy_A 6 TKEKLMEQLKGG---IIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRA--NSVRDIKEIQAIT-DLPIIGIIKKD 79 (234)
T ss_dssp CHHHHHHHHTTS---CEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEE--ESHHHHHHHHTTC-CSCEEEECBCC
T ss_pred hHHHHHHHHhCC---EEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeec--CCHHHHHHHHHhC-CCCEEeeEcCC
Confidence 456788888443 334444332 112123 4456677777777533222 3577888888864 5666 322211
Q ss_pred cCCC-----chhh--hHhhhhcCceEeeccccc-------CHHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEE
Q 028497 118 DPST-----GFRT--NLLRIRKAGVVGVYHPLI-------DEKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAV 180 (208)
Q Consensus 118 ~~~~-----~~~~--~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i 180 (208)
.|.. .... ......|++++.++.... ..++++.+++. |+.+.+ .+.+.+++..+.+.|+|.|
T Consensus 80 ~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 80 YPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp CTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEE
T ss_pred CCccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEE
Confidence 1110 0001 122347889887654322 14788888887 776554 6678888999999999999
No 77
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=79.68 E-value=4 Score=31.88 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=31.4
Q ss_pred HHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 147 LVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
..+.+.+.|+.|..|+.+++...+++.++|++.|+-
T Consensus 127 aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmP 162 (265)
T 1wv2_A 127 AAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMP 162 (265)
T ss_dssp HHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEe
Confidence 345566779999999999999999999999999875
No 78
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=79.18 E-value=11 Score=29.71 Aligned_cols=60 Identities=20% Similarity=0.282 Sum_probs=45.7
Q ss_pred HHHHHHHhC--CCeEEEe-eCCCHHHHHHHHhCCCCEEEc------CChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR--NKRVFAW-TVDDEDSMRKMLHERVDAVVT------SNPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~w-tv~~~~~~~~~~~~gvd~i~T------D~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+.++.+++. +++|..- .+.+.+++.+++..|+|+|.. ..|..+.++.++++.-....|+.
T Consensus 233 ~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l~~~~~~~g~~ 301 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDELLEIMARKGYR 301 (314)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHHHHHHHHHHHHHHHcCCC
Confidence 456666553 7888654 688999999999999999965 47777888888777777777753
No 79
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=78.77 E-value=11 Score=31.10 Aligned_cols=150 Identities=14% Similarity=0.130 Sum_probs=87.6
Q ss_pred cCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcce-EEEeeCHHHHHHHHhhccCCeEEEEEEec
Q 028497 40 VITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNC-LVWAKSDNLVRDIMRLSSNVTAGYIIMVD 118 (208)
Q Consensus 40 ~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~-ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~ 118 (208)
....|.++++++++.+..+.+||-+...... ..--.-++.+++.|+.-. +=..|+.+.+..+.+. +++.+..+.
T Consensus 48 ~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~L-g~s~~dl~~~~~lGi~glRLD~Gf~~~eia~ls~n---lkIeLNASt- 122 (372)
T 2p0o_A 48 YRQRLTDLGAIAKAEKMKIMVDISGEALKRA-GFSFDELEPLIELGVTGLRMDYGITIEQMAHASHK---IDIGLNAST- 122 (372)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECHHHHHTT-TCBTTBCHHHHHHTCCEEEECSSCCHHHHHHHHTT---SEEEEETTT-
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCHHHHHHc-CCCHHHHHHHHHcCCCEEEEcCCCCHHHHHHHhcC---CEEEEECcc-
Confidence 3456888899998887889999876321000 000012345666676543 4478888877777664 777766642
Q ss_pred CCCchhhhHhhhhcCc---eEeec--c----cccCHHH----HHHHHhCCCeEEEeeCCCH-------------------
Q 028497 119 PSTGFRTNLLRIRKAG---VVGVY--H----PLIDEKL----VRTFHGRNKRVFAWTVDDE------------------- 166 (208)
Q Consensus 119 ~~~~~~~~~~~~~~~~---~~~~~--~----~~~~~~~----v~~~~~~g~~v~~wtv~~~------------------- 166 (208)
........+.+ .+++ +.++| | +-++.++ -+++|+.|+++.++...+.
T Consensus 123 i~~~~l~~l~~-~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~~rGPl~eGLPTLE~HR~~ 201 (372)
T 2p0o_A 123 ITLEEVAELKA-HQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQTRGPIFAGLPTLEKHRGQ 201 (372)
T ss_dssp CCHHHHHHHHH-TTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSSCCTTTCSCCCSBGGGTTS
T ss_pred CCHHHHHHHHH-cCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCccCCCccCCCCchHHhCCC
Confidence 11111123322 4443 22221 2 2344444 3458999999999865321
Q ss_pred ---HHHHHHHhC-CCCEEEcCChHHHHHHHHHH
Q 028497 167 ---DSMRKMLHE-RVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 167 ---~~~~~~~~~-gvd~i~TD~P~~~~~~~~~~ 195 (208)
.++..++.. ++|.|+--+|..-.+-++..
T Consensus 202 ~~~~~a~~L~~~~~iD~V~IGd~~~S~~el~~l 234 (372)
T 2p0o_A 202 NPFAAAVGLMADPYVDAVYIGDPTISERTMAQF 234 (372)
T ss_dssp CHHHHHHHHHHSTTCCEEEECSSCCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEECCCCCCHHHHHHH
Confidence 377888888 69998887765544444433
No 80
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=76.85 E-value=12 Score=27.50 Aligned_cols=86 Identities=12% Similarity=0.088 Sum_probs=51.2
Q ss_pred eCHHHHHHHHhhccCCeEEEEEE-ecCCCchhhhHhhhhcCceEeeccccc---CHHHHHHHHhCCCeEEEee--CCCHH
Q 028497 94 KSDNLVRDIMRLSSNVTAGYIIM-VDPSTGFRTNLLRIRKAGVVGVYHPLI---DEKLVRTFHGRNKRVFAWT--VDDED 167 (208)
Q Consensus 94 f~~~~l~~l~~~~p~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~g~~v~~wt--v~~~~ 167 (208)
+-+..++.+++..|+.++-+-.. .+... ...+.+...|++++.++...- -...++.+++.|+.+.+-. .+++.
T Consensus 39 ~g~~~i~~l~~~~~~~~i~~~l~~~di~~-~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~ 117 (207)
T 3ajx_A 39 EGLSVITAVKKAHPDKIVFADMKTMDAGE-LEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKA 117 (207)
T ss_dssp HCTHHHHHHHHHSTTSEEEEEEEECSCHH-HHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHH
T ss_pred hCHHHHHHHHHhCCCCeEEEEEEecCccH-HHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChH
Confidence 44567889998877777654222 22101 111223448999887654322 1345677888898875433 23444
Q ss_pred H-HHHHHhCCCCEE
Q 028497 168 S-MRKMLHERVDAV 180 (208)
Q Consensus 168 ~-~~~~~~~gvd~i 180 (208)
+ ++.+...|+|.|
T Consensus 118 ~~~~~~~~~g~d~v 131 (207)
T 3ajx_A 118 TRAQEVRALGAKFV 131 (207)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCEE
Confidence 4 667778899998
No 81
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=76.82 E-value=33 Score=29.18 Aligned_cols=108 Identities=12% Similarity=0.024 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHhcCCcceEEEee---C---HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec------
Q 028497 72 GLAKDILSVIERTKCYNCLVWAK---S---DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY------ 139 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf---~---~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------ 139 (208)
...+.+..++ +.|..-..+-+. + .+.++++++..|++++..-.-..+ .....+...|++++.+-
T Consensus 229 ~~~~~a~~l~-~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~---e~a~~l~~aGaD~I~vg~g~Gs~ 304 (490)
T 4avf_A 229 DTGERVAALV-AAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATA---EAAKALAEAGADAVKVGIGPGSI 304 (490)
T ss_dssp THHHHHHHHH-HTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHTTCSEEEECSSCSTT
T ss_pred chHHHHHHHh-hcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcH---HHHHHHHHcCCCEEEECCCCCcC
Confidence 3444444444 446543334222 1 257888888888888754211111 11122234788887641
Q ss_pred cc--------ccC----HHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 140 HP--------LID----EKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 140 ~~--------~~~----~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
.. ..+ .+..+.++..+++|.+= ++.+..++.+++.+|+++++.-
T Consensus 305 ~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 305 CTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp CHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred CCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeec
Confidence 10 001 23344444668998875 5789999999999999998865
No 82
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=76.54 E-value=7.2 Score=33.36 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=41.7
Q ss_pred hhcCceEeeccccc----CHHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 130 IRKAGVVGVYHPLI----DEKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 130 ~~~~~~~~~~~~~~----~~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
..|++++.++...- ..+.++.+++. +++|.+-++.+.+.++++.+.|+|+|..
T Consensus 265 ~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 265 QAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEE
Confidence 37888887644332 23678888887 8999887788999999999999999955
No 83
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=76.24 E-value=18 Score=28.31 Aligned_cols=102 Identities=9% Similarity=0.114 Sum_probs=56.6
Q ss_pred HHHHHHHhhccCCeEEEEEEecCC-CchhhhHh---hhhcCceEee-cccc-cCHHHHHHHHhCCCeEE-EeeCCC-HHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPS-TGFRTNLL---RIRKAGVVGV-YHPL-IDEKLVRTFHGRNKRVF-AWTVDD-EDS 168 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~-~~~~~~~~---~~~~~~~~~~-~~~~-~~~~~v~~~~~~g~~v~-~wtv~~-~~~ 168 (208)
+.++++|+..+++|+.++...+|- .+....+. ...|++.+.+ ..+. -..++.+.++++|+.+. .=+.++ .+.
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~er 165 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDET 165 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHH
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHH
Confidence 456777776688998766443331 11113333 3478887543 2222 24678899999999853 344444 455
Q ss_pred HHHHHh-----------CCCCEEEcCChHHHHHHHHHHHhh
Q 028497 169 MRKMLH-----------ERVDAVVTSNPILFQRVMQDIRTQ 198 (208)
Q Consensus 169 ~~~~~~-----------~gvd~i~TD~P~~~~~~~~~~~~~ 198 (208)
++...+ .|+.|.-+..|..+.+++++.++.
T Consensus 166 i~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~ 206 (271)
T 3nav_A 166 LRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQF 206 (271)
T ss_dssp HHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHh
Confidence 655543 356666666777777888776654
No 84
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=75.81 E-value=11 Score=31.24 Aligned_cols=52 Identities=8% Similarity=0.141 Sum_probs=39.7
Q ss_pred hcCceEeecccccC----HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 131 RKAGVVGVYHPLID----EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 131 ~~~~~~~~~~~~~~----~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.|++++.++...-+ .+.++.+++. +++|.+-++.+.++++.+.+.|+|+|+.
T Consensus 164 ~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 164 AHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEE
T ss_pred CCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEE
Confidence 67787765322222 3556777777 8999887788999999999999999977
No 85
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=75.81 E-value=8.9 Score=29.52 Aligned_cols=38 Identities=16% Similarity=0.181 Sum_probs=22.9
Q ss_pred HHHHHHHhC-CCeEEEeeCCCHH---HHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGR-NKRVFAWTVDDED---SMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~-g~~v~~wtv~~~~---~~~~~~~~gvd~i~TD 183 (208)
+.++.+++. ++++.+.+..++. .++.+.+.|+|||+.-
T Consensus 84 ~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~ 125 (262)
T 1rd5_A 84 EMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVP 125 (262)
T ss_dssp HHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECT
T ss_pred HHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEc
Confidence 456666654 6787764322221 2345889999987754
No 86
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=75.77 E-value=9.4 Score=29.82 Aligned_cols=56 Identities=9% Similarity=0.156 Sum_probs=33.8
Q ss_pred HHHHHHHhC--CCeEEEeeC-CC------HHHHHHHHhCCCCE-EEcCChHHHHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGR--NKRVFAWTV-DD------EDSMRKMLHERVDA-VVTSNPILFQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv-~~------~~~~~~~~~~gvd~-i~TD~P~~~~~~~~~~~~~~~~~~~ 204 (208)
++++.+++. .+++.+-+- |. +.-++.+.+.|+|| |+-|-|-. -..++...|.+.|.
T Consensus 84 ~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~e---e~~~~~~~~~~~gl 149 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVE---ESAPFSKAAKAHGI 149 (267)
T ss_dssp HHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGG---GCHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHh---hHHHHHHHHHHcCC
Confidence 456666653 567766543 22 44577788999999 56666542 23345555556664
No 87
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=75.74 E-value=6.1 Score=30.39 Aligned_cols=131 Identities=5% Similarity=0.044 Sum_probs=72.4
Q ss_pred CcCCCHHHHHHHHhcCC-ceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEE-EeeCHHHHHHHHhhccCCeEEEEEE
Q 028497 39 QVITTIEDALTLVSNSV-RKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLV-WAKSDNLVRDIMRLSSNVTAGYIIM 116 (208)
Q Consensus 39 ~~iptL~evL~~~~~~~-~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii-~Sf~~~~l~~l~~~~p~~~~~~l~~ 116 (208)
...|..-++-..+.... -++-+-+..+..+-...-+..+.+++ +. +.-+ ..-..+.+....+..|..-+ |.+
T Consensus 22 ~~~Pdpv~aA~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~~---~~-~lNlE~a~t~emi~ia~~~kP~~vt--LVP 95 (243)
T 1m5w_A 22 TAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTL---DT-RMNLEMAVTEEMLAIAVETKPHFCC--LVP 95 (243)
T ss_dssp CCCSCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHC---SS-EEEEEECSSHHHHHHHHHHCCSEEE--ECC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHhc---CC-CEEeccCCCHHHHHHHHHcCCCEEE--ECC
Confidence 34566666655554321 26777777655433223233332222 11 2222 44456666666666664333 222
Q ss_pred ecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 117 VDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
..+. ++....|-|+.. +...+ .+.++.+++.|++|.++.--++++++.+.+.|++.|--
T Consensus 96 E~r~-----e~TTegGldv~~-~~~~l-~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GA~~IEL 154 (243)
T 1m5w_A 96 EKRQ-----EVTTEGGLDVAG-QRDKM-RDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEI 154 (243)
T ss_dssp CCSS-----CSSCCSCCCSGG-GHHHH-HHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEE
T ss_pred CCCC-----CcCCCcchhHHh-hHHHH-HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEE
Confidence 2111 111113323211 11112 56789999999999999988899999999999999853
No 88
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=75.36 E-value=4.1 Score=33.48 Aligned_cols=57 Identities=7% Similarity=0.042 Sum_probs=44.6
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC---ChHHHHHHHHHHHhhhhhc
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS---NPILFQRVMQDIRTQCLEE 202 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD---~P~~~~~~~~~~~~~~~~~ 202 (208)
.++..+|..|++|.+=+|.++++++.+.++|++.++-. .|....++.+.....+.+.
T Consensus 337 ~i~~~a~~l~~~vvaEGVEt~~~~~~l~~~g~~~~QGy~~~~P~~~~~~~~~~~~~~~~~ 396 (400)
T 3sy8_A 337 SVVALAQALGISLVVEGVESDEQRVRLIELGCSIAQGYLFARPMPEQHFLDYCSGSLEHH 396 (400)
T ss_dssp HHHHHHHHHTCEEEECCCCCHHHHHHHHHHTCCEECBTTTBCCBCHHHHHHHHHHC----
T ss_pred HHHHHHHHcCCeEEEecCCcHHHHHHHHHcCCCEEEcCeecCcCCHHHHHHHHHhcCCCC
Confidence 45777899999999999999999999999999988876 6777777776665555443
No 89
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=75.28 E-value=16 Score=30.24 Aligned_cols=108 Identities=10% Similarity=-0.006 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHhcCCc-ceEEEee-------C-HH---HHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec
Q 028497 72 GLAKDILSVIERTKCY-NCLVWAK-------S-DN---LVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY 139 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~-~~ii~Sf-------~-~~---~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (208)
.+...+.+++++++.. .++++.. + .. .+..+++ -++++++--.. .+ ++.....+...++++-+.
T Consensus 258 ~~~~~l~~~l~~~~l~~~~l~lEitE~~~~~~~~~~~~~l~~Lr~--~G~~ialDDFG-~g-~ssl~~L~~l~~d~iKID 333 (413)
T 3gfz_A 258 DAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRV--AGMKLAIDDFG-AG-YSGLSLLTRFQPDKIKVD 333 (413)
T ss_dssp THHHHHHHHHHHTTCCGGGEEEEEEHHHHHTCSTTHHHHHHHHHH--HTCEEEEEEET-SS-SCSHHHHTTCCCSEEEEC
T ss_pred HHHHHHHHHHHHcCcCCCeEEEEEeCChhhcCHHHHHHHHHHHHH--CCCEEEEECCC-CC-cchHHHHhhCCCCEEEEC
Confidence 6778888999999863 3333222 1 12 2344443 35666543211 11 111223333556665554
Q ss_pred ccc------------cCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 140 HPL------------IDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 140 ~~~------------~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
..+ +-..++..+|..|++|.+=+|.++++++.+.++|++.++-.
T Consensus 334 ~s~v~~~~~~~~~~~iv~~ii~la~~lg~~viAEGVEt~~q~~~l~~lG~d~~QGy 389 (413)
T 3gfz_A 334 AELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGF 389 (413)
T ss_dssp HHHHTTTTTBHHHHHHHHHHHHHHHHHTCEEEEECCCSHHHHHHHHHTTCCEEEST
T ss_pred HHHHhhhhcChHHHHHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHcCCCEEEEC
Confidence 221 11346778999999999999999999999999999998765
No 90
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=74.91 E-value=8.2 Score=31.66 Aligned_cols=110 Identities=11% Similarity=0.045 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHhcCCcceEEEee-----CHHH-HHHHHhhccCCeEEEEEEecCCCch--hhhHhhhhcCceEeecccc
Q 028497 71 KGLAKDILSVIERTKCYNCLVWAK-----SDNL-VRDIMRLSSNVTAGYIIMVDPSTGF--RTNLLRIRKAGVVGVYHPL 142 (208)
Q Consensus 71 ~~~~~~v~~~l~~~~~~~~ii~Sf-----~~~~-l~~l~~~~p~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 142 (208)
......+.+..++.|.. ..+.|. +++. -.++++..|+.++...... .... ........+++.+.++.+.
T Consensus 102 ~~in~~lA~~a~~~G~~-~~vGs~~~~le~~~~~~~~v~r~~P~~~~ianig~--~~~~e~~~~~ve~~~adal~ihln~ 178 (365)
T 3sr7_A 102 KEVNEKLAQVADTCGLL-FVTGSYSTALKNPDDTSYQVKKSRPHLLLATNIGL--DKPYQAGLQAVRDLQPLFLQVHINL 178 (365)
T ss_dssp HHHHHHHHHHHHHHTCC-EEC-----------------------CCEEEEEET--TSCHHHHHHHHHHHCCSCEEEEECH
T ss_pred hHHHHHHHHHHHHcCCC-eecccccccccCccccceEehhhCCCCcEEEEeCC--CCCHHHHHHHHHhcCCCEEEEeccc
Confidence 35666777777887742 111111 2222 1123344577766544432 1111 1223345788876654321
Q ss_pred ----------cCH----HHHHHHHh-CCCeEEEeeC---CCHHHHHHHHhCCCCEEEcC
Q 028497 143 ----------IDE----KLVRTFHG-RNKRVFAWTV---DDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 143 ----------~~~----~~v~~~~~-~g~~v~~wtv---~~~~~~~~~~~~gvd~i~TD 183 (208)
.+. +.++.+++ -+++|.+=.+ .++++++.+.+.|+|+|+..
T Consensus 179 ~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 179 MQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECC
T ss_pred cccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEe
Confidence 111 45666664 5899988877 78999999999999999865
No 91
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=74.84 E-value=31 Score=27.73 Aligned_cols=102 Identities=10% Similarity=0.074 Sum_probs=62.6
Q ss_pred HHHHHHHHhhccCCeEEEEEEecCCCchhhhH--hhhhcCceEeecccc----cCHHHHHHHHhCCCeEEEeeC----CC
Q 028497 96 DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNL--LRIRKAGVVGVYHPL----IDEKLVRTFHGRNKRVFAWTV----DD 165 (208)
Q Consensus 96 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~v~~~~~~g~~v~~wtv----~~ 165 (208)
.+.++.+++..|++++..+.. |.......+ +...|++.+.+..+. ...+.++.++++|+.+..... .+
T Consensus 70 ~e~l~~i~~~~~~~~i~~l~~--p~~~~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~ 147 (345)
T 1nvm_A 70 LEYIEAVAGEISHAQIATLLL--PGIGSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIP 147 (345)
T ss_dssp HHHHHHHHTTCSSSEEEEEEC--BTTBCHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSC
T ss_pred HHHHHHHHhhCCCCEEEEEec--CCcccHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCC
Confidence 456777777678888765531 211111112 223677776653222 346778999999999877642 13
Q ss_pred HH----HHHHHHhCCCCEEE-cC-----ChHHHHHHHHHHHhhh
Q 028497 166 ED----SMRKMLHERVDAVV-TS-----NPILFQRVMQDIRTQC 199 (208)
Q Consensus 166 ~~----~~~~~~~~gvd~i~-TD-----~P~~~~~~~~~~~~~~ 199 (208)
++ .++.+.+.|++.|. .| .|..+.++++..+...
T Consensus 148 ~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 148 AEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhc
Confidence 33 35556678988763 22 6999999988876543
No 92
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=74.41 E-value=21 Score=29.74 Aligned_cols=60 Identities=5% Similarity=0.033 Sum_probs=46.2
Q ss_pred HHHHHHHhC---CCeEEEe-eCCCHHHHHHHHhCCCCEEEc------CChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR---NKRVFAW-TVDDEDSMRKMLHERVDAVVT------SNPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~w-tv~~~~~~~~~~~~gvd~i~T------D~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+.+..++++ .++|..- +|.+.+++.+++..|+++|+. +-|..+.++.+++...+.++|+.
T Consensus 333 ~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 333 KFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp HHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 456666543 4777654 688999999999999999884 44788888888888888888863
No 93
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=74.29 E-value=7.5 Score=30.34 Aligned_cols=64 Identities=13% Similarity=0.121 Sum_probs=47.8
Q ss_pred hcCceEeecc-------cccCHHHHHHHHhC-CCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-------ChHHHHHHHHH
Q 028497 131 RKAGVVGVYH-------PLIDEKLVRTFHGR-NKRVFAW-TVDDEDSMRKMLHERVDAVVTS-------NPILFQRVMQD 194 (208)
Q Consensus 131 ~~~~~~~~~~-------~~~~~~~v~~~~~~-g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-------~P~~~~~~~~~ 194 (208)
.|++++-++. ...++++++.+++. +++|.+= ++.+++++..++++|+|+|..+ +|..+.+.+.+
T Consensus 155 ~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~ 234 (265)
T 1wv2_A 155 IGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKH 234 (265)
T ss_dssp SCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 5666654422 23578898888774 7888776 6899999999999999998866 47776665553
No 94
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=74.14 E-value=8.3 Score=32.05 Aligned_cols=52 Identities=12% Similarity=0.202 Sum_probs=40.8
Q ss_pred hcCceEeecccc-cC---HHHHHHHHhC-CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 131 RKAGVVGVYHPL-ID---EKLVRTFHGR-NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 131 ~~~~~~~~~~~~-~~---~~~v~~~~~~-g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.|++++.+.... .+ .+.++.+++. |++|.+=++.+.++++.+.+.|+|+|+.
T Consensus 155 aGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 155 AGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKV 211 (400)
T ss_dssp HTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEE
Confidence 688888653222 12 4677788876 9998887888999999999999999987
No 95
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=74.14 E-value=7 Score=30.36 Aligned_cols=132 Identities=11% Similarity=0.101 Sum_probs=78.3
Q ss_pred CCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEEe
Q 028497 38 DQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMV 117 (208)
Q Consensus 38 ~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~ 117 (208)
+...|..-++...+...+-++-+-+..+..+-...-+..+.+++ ..+-.+=.+-..+.+..+.+..|..-+ +.
T Consensus 21 g~~~Pdpv~aA~~ae~aGdgITvHlReDrRHI~d~Dv~~L~~~~---~~~lNlE~a~t~emi~ial~~kP~~vt--LV-- 93 (260)
T 3o6c_A 21 MVNDPDLLEAAFIVARHGDQITLHVREDRRHAQDFDLENIIKFC---KSPVNLECALNDEILNLALKLKPHRVT--LV-- 93 (260)
T ss_dssp TSCCSCHHHHHHHHHHHSSEEEEECCTTCSSSCHHHHHHHHHHC---SSCEEEEECSCHHHHHHHHHHCCSEEE--EC--
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeeCCCcccCCHHHHHHHHHHc---CCCEEeecCCCHHHHHHHHHcCCCEEE--EC--
Confidence 34566666665544321137778887765432223333333222 221122355677888888787785433 22
Q ss_pred cCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 118 DPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
|... .++....|-++ +...+ .+.++.+++.|++|..+.--++++++.+.+.|++.|--.
T Consensus 94 -PEkr--eE~TTegGldv---~~~~L-~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GAd~IELh 152 (260)
T 3o6c_A 94 -PEKR--EELTTEGGLCL---NHAKL-KQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELH 152 (260)
T ss_dssp -CCSG--GGBCTTSSBCT---TCTTH-HHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEEC
T ss_pred -CCCC--CccCCCCChhh---CHHHH-HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEEe
Confidence 2211 12222244443 23333 678899999999999999778999999999999998763
No 96
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=73.96 E-value=15 Score=26.93 Aligned_cols=56 Identities=9% Similarity=-0.056 Sum_probs=37.8
Q ss_pred hHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 126 NLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+.+...|++++.+.....+...++.+. .++.+. .++.+..++..+...|+|.|..+
T Consensus 80 ~~a~~~gad~v~l~~~~~~~~~~~~~~-~~~~~~-v~~~t~~e~~~~~~~g~d~i~~~ 135 (215)
T 1xi3_A 80 DVALAVDADGVQLGPEDMPIEVAKEIA-PNLIIG-ASVYSLEEALEAEKKGADYLGAG 135 (215)
T ss_dssp HHHHHHTCSEEEECTTSCCHHHHHHHC-TTSEEE-EEESSHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHcCCCEEEECCccCCHHHHHHhC-CCCEEE-EecCCHHHHHHHHhcCCCEEEEc
Confidence 344558888887654444555566655 565443 34577778888889999999864
No 97
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=73.93 E-value=12 Score=30.25 Aligned_cols=66 Identities=17% Similarity=0.116 Sum_probs=46.8
Q ss_pred hcCceEeecccccCHHHHHHHH-hCCCeEEEeeCCCH--------------------HHHHHHHhCCCCEEEcCChHHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFH-GRNKRVFAWTVDDE--------------------DSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~-~~g~~v~~wtv~~~--------------------~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
-|+|++-+.-.+.--+.++.++ ..++++.+|-|.-+ +.+.-+...|+|+|+|-+...+.
T Consensus 259 EGAD~vMVKPal~YLDIi~~vk~~~~~PvaaYqVSGEYAMikAAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~a 338 (356)
T 3obk_A 259 EGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEAA 338 (356)
T ss_dssp TTCSEEEEESSGGGHHHHHHHHHHCSSCEEEEECHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHH
T ss_pred cCCCEEEecCCCcHHHHHHHHHhcCCCCEEEEEccHHHHHHHHHHHcCCccHHHHHHHHHHHHHHcCCCEEehhhHHHHH
Confidence 5788765544444457777766 47999999987422 12333457899999999998888
Q ss_pred HHHHHHH
Q 028497 190 RVMQDIR 196 (208)
Q Consensus 190 ~~~~~~~ 196 (208)
+++++-+
T Consensus 339 ~~L~~~~ 345 (356)
T 3obk_A 339 KWMVEDM 345 (356)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 8887543
No 98
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=73.77 E-value=13 Score=29.04 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=35.1
Q ss_pred HHHHHHHhC--CCeEEEeeC-------CCHHHHHHHHhCCCCE-EEcCChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR--NKRVFAWTV-------DDEDSMRKMLHERVDA-VVTSNPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv-------~~~~~~~~~~~~gvd~-i~TD~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
++++.+++. .+++.+-+- .-+.-++.+.+.|||| |+.|-|-.- ..++...|.+.|..
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee---~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNE---SQPFVAAAEKFGIQ 152 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGG---CHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHH---HHHHHHHHHHcCCe
Confidence 456666653 567765442 1244577888999999 666766532 33556666676643
No 99
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=73.51 E-value=21 Score=27.52 Aligned_cols=134 Identities=13% Similarity=0.031 Sum_probs=78.4
Q ss_pred CHHHHHHHHhcCCceEEEEeecCCCCCc---hhHHHHHHHHHHhcCCcceEEE------eeCHHHHHHHHhhccCCeEEE
Q 028497 43 TIEDALTLVSNSVRKVILDAKVGPPSYE---KGLAKDILSVIERTKCYNCLVW------AKSDNLVRDIMRLSSNVTAGY 113 (208)
Q Consensus 43 tL~evL~~~~~~~~~l~lEiK~~~~~~~---~~~~~~v~~~l~~~~~~~~ii~------Sf~~~~l~~l~~~~p~~~~~~ 113 (208)
.|.++|. .....+.-|+|..++... ..-...+++...+.|..-..+. ..+.+.++.+++. -++|+
T Consensus 36 ~~~~al~---~~~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-v~lPv-- 109 (254)
T 1vc4_A 36 SFKEALL---RPGLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-VDLPL-- 109 (254)
T ss_dssp CHHHHHT---SSSCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-CCSCE--
T ss_pred CHHHHHh---hcCCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-cCCCE--
Confidence 5666664 223689999996543210 0112345556666675433232 1256778888874 45665
Q ss_pred EEEecCCCch-hhhHhhhhcCceEeecccccC---HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 114 IIMVDPSTGF-RTNLLRIRKAGVVGVYHPLID---EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 114 l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.. +.-... .-..+...|++.+......++ .++++.++..|+.+.+-+ ++.++..++++.|++.|-.|+
T Consensus 110 l~k-dfI~d~~qi~~a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lvev-~~~~E~~~a~~~gad~IGvn~ 182 (254)
T 1vc4_A 110 LRK-DFVVDPFMLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVEV-HTERELEIALEAGAEVLGINN 182 (254)
T ss_dssp EEE-SCCCSHHHHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEEE-CSHHHHHHHHHHTCSEEEEES
T ss_pred EEC-CcCCCHHHHHHHHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHcCCCEEEEcc
Confidence 232 211111 112245689998876433322 355667778999887544 677788899999999886643
No 100
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=73.09 E-value=24 Score=29.81 Aligned_cols=109 Identities=11% Similarity=-0.011 Sum_probs=61.9
Q ss_pred HHHHHHHHHhcCCcceEE-Eee-----CHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecc-------
Q 028497 74 AKDILSVIERTKCYNCLV-WAK-----SDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYH------- 140 (208)
Q Consensus 74 ~~~v~~~l~~~~~~~~ii-~Sf-----~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------- 140 (208)
.+.+ +.+.+.|..-..+ .++ ..+.++++++..|++++..-....+ .........|++++.+..
T Consensus 239 ~~~a-~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~---e~a~~l~~~G~d~I~v~~~~G~~~~ 314 (494)
T 1vrd_A 239 MERV-EKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATP---EGTEALIKAGADAVKVGVGPGSICT 314 (494)
T ss_dssp HHHH-HHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSH---HHHHHHHHTTCSEEEECSSCSTTCH
T ss_pred HHHH-HHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCH---HHHHHHHHcCCCEEEEcCCCCcccc
Confidence 3443 3444556544444 221 2357888888888888754211111 101222347888775411
Q ss_pred -------cccCHHH----HHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcCChH
Q 028497 141 -------PLIDEKL----VRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTSNPI 186 (208)
Q Consensus 141 -------~~~~~~~----v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD~P~ 186 (208)
..-+... .+.++..+++|.+- ++.+..++.+++.+|+|++..-.|-
T Consensus 315 ~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~ 372 (494)
T 1vrd_A 315 TRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIF 372 (494)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred ccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 0111122 22233458998875 6789999999999999999965544
No 101
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=73.04 E-value=37 Score=27.73 Aligned_cols=103 Identities=10% Similarity=-0.001 Sum_probs=58.0
Q ss_pred HHHHHhcCCcceEEEee---CH---HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec---ccc------
Q 028497 78 LSVIERTKCYNCLVWAK---SD---NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY---HPL------ 142 (208)
Q Consensus 78 ~~~l~~~~~~~~ii~Sf---~~---~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------ 142 (208)
++.+.+.|..-.++-+. +. +.++++++..|++++..-.-..+ .....+...|+|++.+- ...
T Consensus 113 ~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~---e~A~~a~~aGAD~I~vG~gpGs~~~tr~~ 189 (366)
T 4fo4_A 113 VKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATA---EGARALIEAGVSAVKVGIGPGSICTTRIV 189 (366)
T ss_dssp HHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSH---HHHHHHHHHTCSEEEECSSCSTTBCHHHH
T ss_pred HHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCH---HHHHHHHHcCCCEEEEecCCCCCCCcccc
Confidence 34455556543334232 22 34677888788888643211111 10112234788887651 111
Q ss_pred ----cC-HHHHH----HHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 143 ----ID-EKLVR----TFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 143 ----~~-~~~v~----~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
.. ...+. .++..+++|.+- ++.+..++.+++.+|+++|.--
T Consensus 190 ~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 190 TGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp HCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred cCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 11 12233 234568998876 5789999999999999999754
No 102
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=72.98 E-value=8.1 Score=30.79 Aligned_cols=54 Identities=11% Similarity=0.025 Sum_probs=38.3
Q ss_pred HHHHHHHhCCCeEEEeeC---------CCH----H-HHHHHHhCCCCEEEcCCh-------HHHHHHHHHHHhhh
Q 028497 146 KLVRTFHGRNKRVFAWTV---------DDE----D-SMRKMLHERVDAVVTSNP-------ILFQRVMQDIRTQC 199 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv---------~~~----~-~~~~~~~~gvd~i~TD~P-------~~~~~~~~~~~~~~ 199 (208)
++++.+++.|+++.+|.. +++ . .++.+.++|+|.|-+..| +.+.++++.+..-|
T Consensus 146 ~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~ 220 (304)
T 1to3_A 146 EFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHI 220 (304)
T ss_dssp HHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccC
Confidence 457778999999999874 122 2 366677899999999987 56666666544334
No 103
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.86 E-value=23 Score=25.18 Aligned_cols=51 Identities=4% Similarity=-0.029 Sum_probs=34.1
Q ss_pred HHHHHHHHhCC---CeEEEeeCCCHHHHHHHHhCCCCEEEcC-C-hHHHHHHHHHH
Q 028497 145 EKLVRTFHGRN---KRVFAWTVDDEDSMRKMLHERVDAVVTS-N-PILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g---~~v~~wtv~~~~~~~~~~~~gvd~i~TD-~-P~~~~~~~~~~ 195 (208)
+++++.+++.| ++|++=+.--..++..+.+.|+|++++. - +..+.+.++++
T Consensus 87 ~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~~~~~~~~~~~~~~~~~ 142 (161)
T 2yxb_A 87 KRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIFLPGTSLGEIIEKVRKL 142 (161)
T ss_dssp HHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEECCCCCHHHHHHHHHHH
Confidence 56677777766 5666666555667777889999998764 2 24455555543
No 104
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=72.34 E-value=5.4 Score=30.62 Aligned_cols=62 Identities=11% Similarity=0.118 Sum_probs=44.4
Q ss_pred hcCceEeeccc--ccCHHHHHHHHhC--CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHH
Q 028497 131 RKAGVVGVYHP--LIDEKLVRTFHGR--NKRVFA-WTVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQ 193 (208)
Q Consensus 131 ~~~~~~~~~~~--~~~~~~v~~~~~~--g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~ 193 (208)
.+..++...+. .-+.++++.+++. .+++.+ .+++++++++++.+ |+|+++.- +|+.++++.+
T Consensus 158 ~g~~~vY~e~sG~~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~~~~~~e~v~ 229 (235)
T 3w01_A 158 YRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKDIKKALKTVK 229 (235)
T ss_dssp TCCSEEEEECTTSCCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHCHHHHHHTTC
T ss_pred cCCCEEEEecCCCcCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecCHHHHHHHHH
Confidence 45565544332 2368899999886 467765 67999999999988 99999875 5666665543
No 105
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=71.80 E-value=3.5 Score=32.58 Aligned_cols=39 Identities=10% Similarity=0.126 Sum_probs=34.9
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
++++.+|+.|+-..+|+. ++++.+.+.++|+|.|+..-|
T Consensus 154 e~I~~A~~~gL~Ti~~v~-~~eeA~amA~agpDiI~~h~g 192 (286)
T 2p10_A 154 EMIAEAHKLDLLTTPYVF-SPEDAVAMAKAGADILVCHMG 192 (286)
T ss_dssp HHHHHHHHTTCEECCEEC-SHHHHHHHHHHTCSEEEEECS
T ss_pred HHHHHHHHCCCeEEEecC-CHHHHHHHHHcCCCEEEECCC
Confidence 578999999999998884 778889999999999999888
No 106
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=71.71 E-value=12 Score=30.06 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=45.2
Q ss_pred hcCceEeecccccCHHHHHHHHh-CCCeEEEeeCCCH-------------------HHHHHHHhCCCCEEEcCChHHHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHG-RNKRVFAWTVDDE-------------------DSMRKMLHERVDAVVTSNPILFQR 190 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~wtv~~~-------------------~~~~~~~~~gvd~i~TD~P~~~~~ 190 (208)
-|+|++-+.-.+.--+.++.+++ .++++.+|-|.-+ +.+.-+...|+|+|+|-+...+.+
T Consensus 252 EGAD~vMVKPal~YLDIir~vk~~~~~PvaaYqVSGEYAMikaAa~~GwiD~~~v~Esl~~~kRAGAd~IiTYfA~~~a~ 331 (337)
T 1w5q_A 252 EGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWLAESVILESLTAFKRAGADGILTYFAKQAAE 331 (337)
T ss_dssp TTCSEEEEESCGGGHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHTCSEEEETTHHHHHH
T ss_pred hCCCEEEEcCCCchHHHHHHHHHhcCCCEEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHhcCCCEEeeecHHHHHH
Confidence 68887765544444677777764 5899999876321 223334578999999999999998
Q ss_pred HHH
Q 028497 191 VMQ 193 (208)
Q Consensus 191 ~~~ 193 (208)
+++
T Consensus 332 ~L~ 334 (337)
T 1w5q_A 332 QLR 334 (337)
T ss_dssp HHH
T ss_pred HHh
Confidence 886
No 107
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=71.00 E-value=8.6 Score=26.97 Aligned_cols=44 Identities=11% Similarity=0.211 Sum_probs=30.5
Q ss_pred HHHHHHHHhCCCeEEEeeCCCH----HHHHHHHhCCC--CEEEcCChHHH
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDE----DSMRKMLHERV--DAVVTSNPILF 188 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~----~~~~~~~~~gv--d~i~TD~P~~~ 188 (208)
.+.++.++++|..+.++|.++. .....+.+.|+ +.|..|.|+..
T Consensus 30 ~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~P~~~ 79 (142)
T 2obb_A 30 VETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDYPEEE 79 (142)
T ss_dssp HHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSSTTC-
T ss_pred HHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCCchhh
Confidence 5778889999999999998873 23344445565 56777778743
No 108
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=71.00 E-value=13 Score=29.30 Aligned_cols=50 Identities=12% Similarity=0.227 Sum_probs=38.8
Q ss_pred HHHHHHHhCC---CeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHHH
Q 028497 146 KLVRTFHGRN---KRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDIR 196 (208)
Q Consensus 146 ~~v~~~~~~g---~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~~ 196 (208)
..++.+++.. +++.+ .+++.++++.+++.|+|.|..| .|+.++++++...
T Consensus 181 ~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn~~~e~l~~av~~l~ 235 (285)
T 1o4u_A 181 RAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIK 235 (285)
T ss_dssp HHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhh
Confidence 4567777765 56666 6788999999999999999999 5677777776553
No 109
>3tlq_A Regulatory protein YDIV; anti-FLHD4C2 factor, repress motility, transcription; 1.91A {Escherichia coli}
Probab=70.85 E-value=5.8 Score=30.17 Aligned_cols=39 Identities=8% Similarity=0.057 Sum_probs=34.8
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
..+++.+|+.|++|.+=+|.+.++++.+.++|++.++--
T Consensus 188 ~~ii~~a~~l~~~vvAEGVEt~~q~~~l~~lG~~~~QGy 226 (242)
T 3tlq_A 188 RAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGC 226 (242)
T ss_dssp HHHHHHHTTTCSEEEECCCCSHHHHHHHGGGCCSEECST
T ss_pred HHHHHHHHHcCCEEEEEeCCcHHHHHHHHHcCCCEEeCC
Confidence 456778999999999999999999999999999987653
No 110
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=70.28 E-value=4.3 Score=30.47 Aligned_cols=36 Identities=6% Similarity=0.027 Sum_probs=31.9
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEE
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVV 181 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~ 181 (208)
.++..+|..|++|.+=+|.++++++.+.++|++.++
T Consensus 190 ~i~~~a~~lg~~viaeGVEt~~~~~~l~~~G~~~~Q 225 (235)
T 3kzp_A 190 AWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQ 225 (235)
T ss_dssp HHHHHHHHTTCEEEEEEECSTHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHcCCEEEEEEecCHHHHHHHHHcCCCEee
Confidence 456678999999999999999999999999998654
No 111
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=69.89 E-value=7.7 Score=30.36 Aligned_cols=134 Identities=10% Similarity=0.046 Sum_probs=76.3
Q ss_pred CCCcCCCHHHHHHHHhcCC-ceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEE
Q 028497 37 HDQVITTIEDALTLVSNSV-RKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYII 115 (208)
Q Consensus 37 ~~~~iptL~evL~~~~~~~-~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~ 115 (208)
.+...|.+-++-..+.... -++-+-+..+..+-.+.-+..+.+++ ..+-.+=..-..+.+....+..|..-+ |.
T Consensus 48 Rg~~~PDpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~i---~t~lNlEma~t~emi~ial~~kP~~vt--LV 122 (278)
T 3gk0_A 48 RGTAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRV---KTRMNLECAVTPEMLDIACEIRPHDAC--LV 122 (278)
T ss_dssp HSSSCSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHC---SSCEEEEECSSHHHHHHHHHHCCSEEE--EC
T ss_pred CCCCCCCHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHHc---CCCEEeecCCCHHHHHHHHHcCCCEEE--EC
Confidence 3556777777666554321 27777777764432223233333322 211112245567777777777775433 22
Q ss_pred EecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 116 MVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
+..+ .++...-|-|+. .+...+ .+.++.+++.|++|.++.--++++++.+.+.|+|.|--
T Consensus 123 PEkr-----eE~TTegGlDv~-~~~~~L-~~~i~~L~~~GIrVSLFIDpd~~qI~aA~~~GAd~IEL 182 (278)
T 3gk0_A 123 PEKR-----SELTTEGGLDVV-GHFDAV-RAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIEL 182 (278)
T ss_dssp CCSG-----GGBCSSSSBCTT-TTHHHH-HHHHHHHHHTTCEEEEEECSCHHHHHHHHHHTCSEEEE
T ss_pred CCCC-----CCcCCCcchhhh-ccHHHH-HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEE
Confidence 2111 122121232211 011112 56789999999999999977899999999999999876
No 112
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=69.79 E-value=31 Score=26.84 Aligned_cols=103 Identities=5% Similarity=0.093 Sum_probs=55.9
Q ss_pred HHHHHHHHhhccCCeEEEEEEecCC-CchhhhHh---hhhcCceEeec-ccc-cCHHHHHHHHhCCCeEE-EeeCCC-HH
Q 028497 96 DNLVRDIMRLSSNVTAGYIIMVDPS-TGFRTNLL---RIRKAGVVGVY-HPL-IDEKLVRTFHGRNKRVF-AWTVDD-ED 167 (208)
Q Consensus 96 ~~~l~~l~~~~p~~~~~~l~~~~~~-~~~~~~~~---~~~~~~~~~~~-~~~-~~~~~v~~~~~~g~~v~-~wtv~~-~~ 167 (208)
.+.++.+|+..+++|+.+....+|- .+...++. ...|++.+.+. .+. -..++++.++++|+.+. +-+.++ .+
T Consensus 83 ~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~e 162 (267)
T 3vnd_A 83 FDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADAD 162 (267)
T ss_dssp HHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHH
T ss_pred HHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHH
Confidence 3567777776678888765433331 11113333 34788876543 221 24678999999999864 334444 45
Q ss_pred HHHHHHh-----------CCCCEEEcCChHHHHHHHHHHHhh
Q 028497 168 SMRKMLH-----------ERVDAVVTSNPILFQRVMQDIRTQ 198 (208)
Q Consensus 168 ~~~~~~~-----------~gvd~i~TD~P~~~~~~~~~~~~~ 198 (208)
.++.+.+ .|+.|..+..|..+.+++++.++.
T Consensus 163 ri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~ 204 (267)
T 3vnd_A 163 TLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEF 204 (267)
T ss_dssp HHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTT
T ss_pred HHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHh
Confidence 5555542 466677666676677777776543
No 113
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=68.36 E-value=12 Score=29.67 Aligned_cols=50 Identities=20% Similarity=0.158 Sum_probs=37.3
Q ss_pred HHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDIR 196 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~~ 196 (208)
..++.+++. .+++-+ .+++.++.+.+++.|+|.|.-| .|+.++++++...
T Consensus 187 ~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~~~~~l~~av~~~~ 240 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNFSGEDIDIAVSIAR 240 (287)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHhhc
Confidence 445565554 356666 7788899999999999999999 5677777776543
No 114
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=68.13 E-value=41 Score=26.32 Aligned_cols=59 Identities=15% Similarity=0.327 Sum_probs=45.3
Q ss_pred HHHHHHHhC---CCeEEE-eeCCCHHHHHHHHhCCCCEEEc------CChHHHHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGR---NKRVFA-WTVDDEDSMRKMLHERVDAVVT------SNPILFQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~-wtv~~~~~~~~~~~~gvd~i~T------D~P~~~~~~~~~~~~~~~~~~~ 204 (208)
+.++.++++ +++|.. -.+.+.+++.+++..|+|+|.. ..|..+.++.+++..-....|+
T Consensus 230 ~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~~~l~~~g~ 298 (311)
T 1jub_A 230 ANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGY 298 (311)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHHHHHHHHHHHcCC
Confidence 456666654 678765 4688999999999999999965 3677788888777777777775
No 115
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=67.74 E-value=47 Score=26.83 Aligned_cols=87 Identities=15% Similarity=0.080 Sum_probs=52.9
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec-cc------------ccC-----HHHHHHHHhCCCeE
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY-HP------------LID-----EKLVRTFHGRNKRV 158 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~~-----~~~v~~~~~~g~~v 158 (208)
+.++++++..|++++..-.-..+ .....+...|+|++.+. .. ... ++..+.+...+++|
T Consensus 150 ~~i~~lr~~~~~~~vi~g~v~t~---e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipv 226 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAGNVVTG---EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHI 226 (351)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcE
Confidence 36778888777887753211111 11122234788887431 11 011 23334445568888
Q ss_pred EEe-eCCCHHHHHHHHhCCCCEEEcCChH
Q 028497 159 FAW-TVDDEDSMRKMLHERVDAVVTSNPI 186 (208)
Q Consensus 159 ~~w-tv~~~~~~~~~~~~gvd~i~TD~P~ 186 (208)
.+= ++.+..++.+++.+|++++.--.|-
T Consensus 227 Ia~GGI~~g~di~kAlalGA~~V~vG~~f 255 (351)
T 2c6q_A 227 ISDGGCSCPGDVAKAFGAGADFVMLGGML 255 (351)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTT
T ss_pred EEeCCCCCHHHHHHHHHcCCCceeccHHH
Confidence 764 6899999999999999999765544
No 116
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=66.92 E-value=39 Score=25.52 Aligned_cols=137 Identities=15% Similarity=-0.023 Sum_probs=73.4
Q ss_pred CcCCCHHHHHHHHhc-CCceEEEEeecCCC---CCchhHHHHHHHHHHhcCCcceEEEee---CH----HHHHHHHhhcc
Q 028497 39 QVITTIEDALTLVSN-SVRKVILDAKVGPP---SYEKGLAKDILSVIERTKCYNCLVWAK---SD----NLVRDIMRLSS 107 (208)
Q Consensus 39 ~~iptL~evL~~~~~-~~~~l~lEiK~~~~---~~~~~~~~~v~~~l~~~~~~~~ii~Sf---~~----~~l~~l~~~~p 107 (208)
-++.+++++ ..++. -+++++=..|.... .+-....+.+.+ +.+.|..-.++.+. ++ +.++++++.
T Consensus 53 i~~~~~~~i-~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~-~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~-- 128 (229)
T 3q58_A 53 VRIEGIENL-RTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDA-LAQAGADIIAFDASFRSRPVDIDSLLTRIRLH-- 128 (229)
T ss_dssp EEEESHHHH-HHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHH-HHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--
T ss_pred EEECCHHHH-HHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHH-HHHcCCCEEEECccccCChHHHHHHHHHHHHC--
Confidence 445566654 44443 23455433453211 111123344443 45667654444332 23 345555553
Q ss_pred CCeEEEEEEecCCCchhhhHhhhhcCceEeec---c------cccCHHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCC
Q 028497 108 NVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY---H------PLIDEKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERV 177 (208)
Q Consensus 108 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gv 177 (208)
++.++. ... .......+...|++++... + ...+.++++.+.+.+++|..= ++++++++.+++++|+
T Consensus 129 g~~v~~--~v~--t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~Ga 204 (229)
T 3q58_A 129 GLLAMA--DCS--TVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYNTPALAANAIEHGA 204 (229)
T ss_dssp TCEEEE--ECS--SHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTC
T ss_pred CCEEEE--ecC--CHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCC
Confidence 444432 211 1111112234788888531 1 123457788887778888775 5789999999999999
Q ss_pred CEEEcC
Q 028497 178 DAVVTS 183 (208)
Q Consensus 178 d~i~TD 183 (208)
++++.-
T Consensus 205 dgV~VG 210 (229)
T 3q58_A 205 WAVTVG 210 (229)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 999854
No 117
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=66.06 E-value=6.6 Score=30.13 Aligned_cols=107 Identities=6% Similarity=-0.035 Sum_probs=59.4
Q ss_pred EeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeeccccc--CHHHHHHHHhC---------CCeEEE
Q 028497 92 WAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLI--DEKLVRTFHGR---------NKRVFA 160 (208)
Q Consensus 92 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~---------g~~v~~ 160 (208)
.||-+..++.+|+..+. =.-++-.+|..+ -+.....|++++.++.... ....++.+++. |+++.+
T Consensus 56 ~t~G~~~v~~lr~~~~~--DvhLMv~~p~~~--i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv 131 (237)
T 3cu2_A 56 FTVGAIGIKYFPTHCFK--DVHLMVRNQLEV--AKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGA 131 (237)
T ss_dssp BCBCTHHHHTSCTTSEE--EEEEECSCHHHH--HHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEE
T ss_pred hhhhHHHHHHHhhhCCC--CeEEEEECHHHH--HHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEE
Confidence 46677888888876653 222332233211 1223448999876654322 24678889999 988876
Q ss_pred ee-CCCHH-HHHHHHhCCCCEEEc----------CChHHHHHHHHHHHhhhhhcC
Q 028497 161 WT-VDDED-SMRKMLHERVDAVVT----------SNPILFQRVMQDIRTQCLEEG 203 (208)
Q Consensus 161 wt-v~~~~-~~~~~~~~gvd~i~T----------D~P~~~~~~~~~~~~~~~~~~ 203 (208)
-. ..++. .++.++ -++|.|.- -++....+-+++.++-+.+.|
T Consensus 132 ~l~p~Tp~~~l~~~l-~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~ 185 (237)
T 3cu2_A 132 CLCPETPISELEPYL-DQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRR 185 (237)
T ss_dssp EECTTSCGGGGTTTT-TTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGG
T ss_pred EEeCCChHHHHHHHh-hcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcC
Confidence 54 33443 344333 46888722 234444555555555554444
No 118
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=65.87 E-value=39 Score=25.17 Aligned_cols=84 Identities=15% Similarity=0.048 Sum_probs=53.7
Q ss_pred HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceE--eec---cc-----ccCHHHHHHHHhCCCeEEEe-eCC
Q 028497 96 DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVV--GVY---HP-----LIDEKLVRTFHGRNKRVFAW-TVD 164 (208)
Q Consensus 96 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~---~~-----~~~~~~v~~~~~~g~~v~~w-tv~ 164 (208)
.+.++.+++..|+.+++.-. ............|++++ .+. .. -.+.+.++.+++.++++.+= +++
T Consensus 121 ~~~i~~i~~~~~~~~v~~~~----~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~~ipvia~GGI~ 196 (234)
T 1yxy_A 121 ASFIRQVKEKYPNQLLMADI----STFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGKIH 196 (234)
T ss_dssp HHHHHHHHHHCTTCEEEEEC----SSHHHHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHHhCCCCeEEEeC----CCHHHHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhCCCCEEEECCCC
Confidence 36788898887877765322 11111111234788887 221 11 12345677776668888764 588
Q ss_pred CHHHHHHHHhCCCCEEEcC
Q 028497 165 DEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 165 ~~~~~~~~~~~gvd~i~TD 183 (208)
+.+++..+++.|+|+++.-
T Consensus 197 s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 197 SPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp SHHHHHHHHTTCCSEEEEC
T ss_pred CHHHHHHHHHCCCCEEEEc
Confidence 8999999999999999765
No 119
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=65.80 E-value=10 Score=30.40 Aligned_cols=62 Identities=19% Similarity=0.105 Sum_probs=44.1
Q ss_pred hcCceEeecccccCHHHHHHHHh-CCCeEEEeeCCCH--------------------HHHHHHHhCCCCEEEcCChHHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHG-RNKRVFAWTVDDE--------------------DSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~wtv~~~--------------------~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
-|+|++-+.-.+.--+.++.+++ .++++.+|-|.-+ +.+.-+...|+|+|+|-+...+.
T Consensus 245 EGAD~vMVKPal~YLDIir~vk~~~~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~a 324 (328)
T 1w1z_A 245 EGADIVMVKPGLAYLDIVWRTKERFDVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAA 324 (328)
T ss_dssp HTCSEEEEESCGGGHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHH
T ss_pred hCCCEEEEcCCCchHHHHHHHHHhcCCCEEEEEccHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeeecHHHHH
Confidence 58887655544444677887764 5899999987422 22334457899999999998888
Q ss_pred HHH
Q 028497 190 RVM 192 (208)
Q Consensus 190 ~~~ 192 (208)
+++
T Consensus 325 ~~L 327 (328)
T 1w1z_A 325 KKL 327 (328)
T ss_dssp HHH
T ss_pred Hhh
Confidence 765
No 120
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=65.45 E-value=9 Score=30.88 Aligned_cols=63 Identities=16% Similarity=0.129 Sum_probs=45.7
Q ss_pred hcCceEeecccccCHHHHHHHHh-C-CCeEEEeeCCCH--------------------HHHHHHHhCCCCEEEcCChHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHG-R-NKRVFAWTVDDE--------------------DSMRKMLHERVDAVVTSNPILF 188 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~-~-g~~v~~wtv~~~--------------------~~~~~~~~~gvd~i~TD~P~~~ 188 (208)
-|+|++-+.-.+.--+.++.+++ . ++++.+|-|.-+ +.+.-+...|+|+|+|-+...+
T Consensus 255 EGAD~vMVKPal~YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~ 334 (342)
T 1h7n_A 255 EGADGIIVKPSTFYLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEF 334 (342)
T ss_dssp TTCSEEEEESSGGGHHHHHHHHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHH
T ss_pred hCCCeEEEecCccHHHHHHHHHHhccCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEEeecHHHH
Confidence 57887655444444678888875 4 799999987422 2334455789999999999998
Q ss_pred HHHHH
Q 028497 189 QRVMQ 193 (208)
Q Consensus 189 ~~~~~ 193 (208)
.++++
T Consensus 335 a~~L~ 339 (342)
T 1h7n_A 335 LDWLD 339 (342)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 88775
No 121
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=65.41 E-value=8.4 Score=31.35 Aligned_cols=51 Identities=10% Similarity=0.131 Sum_probs=37.4
Q ss_pred cCceEeeccccc-C---HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 132 KAGVVGVYHPLI-D---EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 132 ~~~~~~~~~~~~-~---~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
+++++.++...- . .+.++.+++. ++++.+=++-+.++++.+.+.|+|+|..
T Consensus 132 g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v 188 (351)
T 2c6q_A 132 QVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKV 188 (351)
T ss_dssp TCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEE
Confidence 677765543221 1 2457777776 7888887888999999999999999933
No 122
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=64.99 E-value=16 Score=29.03 Aligned_cols=56 Identities=14% Similarity=-0.072 Sum_probs=38.6
Q ss_pred hcCceEeecccccC----------HHHHHHHHhCCCeEEEeeCC------CHH----HHHHHHhCCCCEEEcCChH
Q 028497 131 RKAGVVGVYHPLID----------EKLVRTFHGRNKRVFAWTVD------DED----SMRKMLHERVDAVVTSNPI 186 (208)
Q Consensus 131 ~~~~~~~~~~~~~~----------~~~v~~~~~~g~~v~~wtv~------~~~----~~~~~~~~gvd~i~TD~P~ 186 (208)
.|++.+.+....-+ ..+++.+++.|+++.+|+.. +++ ..+-..++|+|.|-|.+|.
T Consensus 137 ~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~ 212 (295)
T 3glc_A 137 LNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE 212 (295)
T ss_dssp TTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred CCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 78887664322111 24577889999999999864 443 2344558999999999983
No 123
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=64.92 E-value=17 Score=26.51 Aligned_cols=53 Identities=13% Similarity=0.180 Sum_probs=36.4
Q ss_pred hcCceEeecccccC-HHHHHHHHhC---CCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 131 RKAGVVGVYHPLID-EKLVRTFHGR---NKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 131 ~~~~~~~~~~~~~~-~~~v~~~~~~---g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.|++++.+....-. .+.++.+++. ++.+.+-++.+.++++.+.+.|+|+|++.
T Consensus 34 ~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~iv~~ 90 (205)
T 1wa3_A 34 GGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFIVSP 90 (205)
T ss_dssp TTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEEECS
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEEEcC
Confidence 56777665433212 2345655544 56677778889999999999999999765
No 124
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=64.16 E-value=13 Score=28.50 Aligned_cols=40 Identities=15% Similarity=0.251 Sum_probs=33.4
Q ss_pred cCHHHHHHHHhC--CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC
Q 028497 143 IDEKLVRTFHGR--NKRVFA-WTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 143 ~~~~~v~~~~~~--g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
...++++.+++. ++++.+ .+++++++++++.+ |+|+|+..
T Consensus 168 ~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVG 210 (240)
T 1viz_A 168 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVG 210 (240)
T ss_dssp CCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEEC
T ss_pred ChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEC
Confidence 357888988876 678766 57999999999999 99999876
No 125
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=63.63 E-value=61 Score=27.48 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=40.1
Q ss_pred hcCceEeeccccc-C---HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 131 RKAGVVGVYHPLI-D---EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 131 ~~~~~~~~~~~~~-~---~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.|++++.+....- . .+.++.+++. ++++.+-++.+.+.++.+.+.|+|+|..
T Consensus 240 aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 240 AGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp TTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred cccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEE
Confidence 5788877643321 2 3667777765 7899888899999999999999999984
No 126
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=63.43 E-value=8.5 Score=30.88 Aligned_cols=63 Identities=14% Similarity=0.178 Sum_probs=45.1
Q ss_pred hcCceEeecccccCHHHHHHHHh-C-CCeEEEeeCCCH--------------------HHHHHHHhCCCCEEEcCChHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHG-R-NKRVFAWTVDDE--------------------DSMRKMLHERVDAVVTSNPILF 188 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~-~-g~~v~~wtv~~~--------------------~~~~~~~~~gvd~i~TD~P~~~ 188 (208)
-|+|++-+.-.+.--+.++.+++ . ++++.+|-|.-+ +.+.-+...|+|+|+|-+...+
T Consensus 244 EGAD~vMVKPal~YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v~Esl~~~kRAGAd~IiTYfA~~~ 323 (330)
T 1pv8_A 244 EGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQL 323 (330)
T ss_dssp TTCSBEEEESCGGGHHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHH
T ss_pred hCCceEEEecCccHHHHHHHHHHhcCCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeeecHHHH
Confidence 57887655444444678888875 4 799999987422 2233445789999999999998
Q ss_pred HHHHH
Q 028497 189 QRVMQ 193 (208)
Q Consensus 189 ~~~~~ 193 (208)
.++++
T Consensus 324 a~~L~ 328 (330)
T 1pv8_A 324 LQWLK 328 (330)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 88764
No 127
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=62.43 E-value=54 Score=26.87 Aligned_cols=86 Identities=15% Similarity=-0.012 Sum_probs=51.1
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec--------------ccccCHHHHHHHH----hCCCeE
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY--------------HPLIDEKLVRTFH----GRNKRV 158 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~v~~~~----~~g~~v 158 (208)
+.++++++..|++++..-. .. .......+...|++++.+- +..-....+..++ ..+++|
T Consensus 183 e~i~~ir~~~~~~pviv~~-v~--~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipV 259 (404)
T 1eep_A 183 ELIKKIKTKYPNLDLIAGN-IV--TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICI 259 (404)
T ss_dssp HHHHHHHHHCTTCEEEEEE-EC--SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHCCCCeEEEcC-CC--cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceE
Confidence 4567778877788876411 11 1111122234788887651 1011122233333 357887
Q ss_pred EEe-eCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 159 FAW-TVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 159 ~~w-tv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
..- ++.+..++.+++.+|+|+|..-.+
T Consensus 260 ia~GGI~~~~d~~~ala~GAd~V~iG~~ 287 (404)
T 1eep_A 260 IADGGIRFSGDVVKAIAAGADSVMIGNL 287 (404)
T ss_dssp EEESCCCSHHHHHHHHHHTCSEEEECHH
T ss_pred EEECCCCCHHHHHHHHHcCCCHHhhCHH
Confidence 764 678999999999999999987443
No 128
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=62.26 E-value=44 Score=24.57 Aligned_cols=99 Identities=16% Similarity=0.075 Sum_probs=58.7
Q ss_pred HHhcCCcceEEEee---C-----HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeeccc-------cc--
Q 028497 81 IERTKCYNCLVWAK---S-----DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHP-------LI-- 143 (208)
Q Consensus 81 l~~~~~~~~ii~Sf---~-----~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-- 143 (208)
..+.|....++.+. + .+.++++++..|+.+++. . ..+..........|++++..... ..
T Consensus 84 ~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~--~--~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~ 159 (223)
T 1y0e_A 84 LIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMA--D--IATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLL 159 (223)
T ss_dssp HHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEE--E--CSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCT
T ss_pred HHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEe--c--CCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCC
Confidence 34556544444332 2 367888998878877753 2 11211111123477887753211 11
Q ss_pred CH---HHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 144 DE---KLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 144 ~~---~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
.. +.++.+++ .++++.+= ++.+.+++.++++.|+|+++.-
T Consensus 160 ~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 160 YQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp THHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 11 34555443 57888775 5779999999999999999765
No 129
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=61.82 E-value=54 Score=25.47 Aligned_cols=59 Identities=12% Similarity=0.241 Sum_probs=43.7
Q ss_pred HHHHHHHhC-CCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGR-NKRVFAW-TVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~-g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~~~~~~~~~~ 204 (208)
++++.+++. +++|.+- ++.+.+++.+++..|+|+|+.- .|..+.++.++.+.-....|+
T Consensus 231 ~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 231 KLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp HHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHHHHHHHHHHHHHHHcCC
Confidence 556666654 7887765 5789999999999999999654 567777777776665566665
No 130
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=61.41 E-value=21 Score=28.54 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=44.3
Q ss_pred hcCceEeecccccCHHHHHHHHh-CCCeEEEeeCCCH--------------------HHHHHHHhCCCCEEEcCChHHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHG-RNKRVFAWTVDDE--------------------DSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~wtv~~~--------------------~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
-|+|++-+.-.+.--+.++.+++ .++++.+|-|.-+ +.+.-+...|+|+|+|-+...+.
T Consensus 238 EGAD~vMVKPal~YLDIi~~vk~~~~~P~aaYqVSGEYAMikaAa~~GwiD~~~~vlEsl~~~kRAGAd~IiTYfA~~~a 317 (323)
T 1l6s_A 238 QGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLA 317 (323)
T ss_dssp TTCSBEEEESCTTCHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHH
T ss_pred hCCceEEEecCcchhHHHHHHHHhcCCCeEEEEcCcHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCCEEeehhHHHHH
Confidence 58887765555555688888875 6899999987422 23344557899999999988876
Q ss_pred HHH
Q 028497 190 RVM 192 (208)
Q Consensus 190 ~~~ 192 (208)
+.+
T Consensus 318 ~~~ 320 (323)
T 1l6s_A 318 EKK 320 (323)
T ss_dssp HTT
T ss_pred HHh
Confidence 643
No 131
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=61.15 E-value=56 Score=25.43 Aligned_cols=55 Identities=4% Similarity=0.074 Sum_probs=37.5
Q ss_pred HHHHHHHHhCCCeEEEe--e--------CCCHHHH----HHHHhCCCCEEEc------CChHHHHHHHHHHHhhh
Q 028497 145 EKLVRTFHGRNKRVFAW--T--------VDDEDSM----RKMLHERVDAVVT------SNPILFQRVMQDIRTQC 199 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~w--t--------v~~~~~~----~~~~~~gvd~i~T------D~P~~~~~~~~~~~~~~ 199 (208)
.+.++.+++.|+.|... + -.+++.+ +.+.+.|+|.|.- =.|....++++..+...
T Consensus 123 ~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 123 SPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp HHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhC
Confidence 45688999999998622 1 1244443 4445789998742 27999999998876543
No 132
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=61.05 E-value=63 Score=25.96 Aligned_cols=45 Identities=9% Similarity=0.096 Sum_probs=23.9
Q ss_pred HHHHHhCCC---eEEEeeC-CCHHHHHHHHhCCCCEEEcCChHHHHHHH
Q 028497 148 VRTFHGRNK---RVFAWTV-DDEDSMRKMLHERVDAVVTSNPILFQRVM 192 (208)
Q Consensus 148 v~~~~~~g~---~v~~wtv-~~~~~~~~~~~~gvd~i~TD~P~~~~~~~ 192 (208)
...+++.|+ ++.+... .++++++.+++.|+..+..|.++++..+-
T Consensus 74 ~~~~~~~G~~~~~I~~~~~~k~~~~l~~a~~~~v~~~~vds~~~l~~l~ 122 (372)
T 2nva_A 74 IKKVIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIH 122 (372)
T ss_dssp HHHHHHHTCCGGGEEECCSCCCHHHHHHHHHHTCCEEEECSHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEECCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHH
Confidence 344455555 2333332 35566666666666655666666655443
No 133
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=60.92 E-value=58 Score=25.48 Aligned_cols=54 Identities=7% Similarity=0.210 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCCeEEEee---C-------CCHH----HHHHHHhCCCCEE-EcC-----ChHHHHHHHHHHHhh
Q 028497 145 EKLVRTFHGRNKRVFAWT---V-------DDED----SMRKMLHERVDAV-VTS-----NPILFQRVMQDIRTQ 198 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt---v-------~~~~----~~~~~~~~gvd~i-~TD-----~P~~~~~~~~~~~~~ 198 (208)
.+.+++++++|+.|.+.. + .+.+ .++.+.++|++.| +.| .|..+.++++..++.
T Consensus 124 ~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 124 DAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp HHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 346888999999987542 2 1333 3566678999987 333 799999998887654
No 134
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=60.89 E-value=69 Score=26.35 Aligned_cols=110 Identities=5% Similarity=-0.006 Sum_probs=64.6
Q ss_pred HHHHHHhcCCcceEEEeeC--HHHHHHHHhhccCC--eEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHH
Q 028497 77 ILSVIERTKCYNCLVWAKS--DNLVRDIMRLSSNV--TAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFH 152 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~Sf~--~~~l~~l~~~~p~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 152 (208)
+.++.++++. ...+++-+ .+.++.+++..|+. ++.+....++.... .......|+ . ....+..=++.++
T Consensus 24 ~~~l~~~~~t-P~~vidl~~i~~N~~~l~~~~~~~~~~l~~avKan~~~~v-~~~l~~~G~-g----~~vas~~E~~~~~ 96 (425)
T 2qgh_A 24 YEELFQTHKT-PFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSI-LSLLAHLES-G----ADCVSIGEIQRAL 96 (425)
T ss_dssp HHHHHHHCCS-SEEEEEHHHHHHHHHHHHHTTCSSCEEEEEEGGGCCCHHH-HHHHHHTTC-E----EEESSHHHHHHHH
T ss_pred HHHHHHhhCC-CEEEEEHHHHHHHHHHHHHhcCcCCCEEEEEeccCCCHHH-HHHHHHcCC-e----EEEeCHHHHHHHH
Confidence 4455666664 34444433 24567777766643 45444333331111 122222443 2 2234566667778
Q ss_pred hCCC--eEEEeeC--CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 153 GRNK--RVFAWTV--DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 153 ~~g~--~v~~wtv--~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
+.|+ ...+|+. .++++++.+++.|+..+..|....+.++-+
T Consensus 97 ~~G~~~~~i~~~g~~k~~~~i~~a~~~gv~~i~vds~~el~~l~~ 141 (425)
T 2qgh_A 97 KAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIET 141 (425)
T ss_dssp HTTCCGGGEEECCTTCCHHHHHHHHHTTCSEEEECSHHHHHHHHH
T ss_pred HcCCChhHEEEcCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHH
Confidence 8888 4466654 468899999999998889999999776543
No 135
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=60.64 E-value=50 Score=24.68 Aligned_cols=92 Identities=10% Similarity=0.000 Sum_probs=56.4
Q ss_pred EEeeCHHHHHHHHhhccCCeEEEEEEec--CCCchhhhHhhhhcCceEeecccccC---HHHHHHHHhCC---CeEEE--
Q 028497 91 VWAKSDNLVRDIMRLSSNVTAGYIIMVD--PSTGFRTNLLRIRKAGVVGVYHPLID---EKLVRTFHGRN---KRVFA-- 160 (208)
Q Consensus 91 i~Sf~~~~l~~l~~~~p~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~g---~~v~~-- 160 (208)
|.++-+..++.+++..|+.++-+-.-.. |.+. .......|++++.++...-. ...++.+++.| ..+.+
T Consensus 41 f~~~G~~~v~~l~~~~p~~~iflDlKl~Dip~t~--~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~ 118 (221)
T 3exr_A 41 LLQVGSELVEVLRSLFPDKIIVADTKCADAGGTV--AKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVEL 118 (221)
T ss_dssp HHHHCTHHHHHHHHHCTTSEEEEEEEECSCHHHH--HHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEEC
T ss_pred HHhcCHHHHHHHHHhCCCCcEEEEEEeeccHHHH--HHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEE
Confidence 3556778899999988887775433322 2111 12223478998887654221 23456666666 44443
Q ss_pred eeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 161 WTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 161 wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
-|.-+.+.++.+++.|++.++...
T Consensus 119 lts~~~~~~~~~~~~~~~~~v~~~ 142 (221)
T 3exr_A 119 YGDWTYDQAQQWLDAGISQAIYHQ 142 (221)
T ss_dssp CSSCCHHHHHHHHHTTCCEEEEEC
T ss_pred cCCCCHHHHHHHHcCCHHHHHHHH
Confidence 344467778888888998877754
No 136
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=60.49 E-value=49 Score=24.47 Aligned_cols=126 Identities=6% Similarity=-0.127 Sum_probs=65.2
Q ss_pred HHHHHhcC--CceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEee-CHHHHHHHHhh--ccCCeEEE-EEEecCC
Q 028497 47 ALTLVSNS--VRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAK-SDNLVRDIMRL--SSNVTAGY-IIMVDPS 120 (208)
Q Consensus 47 vL~~~~~~--~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf-~~~~l~~l~~~--~p~~~~~~-l~~~~~~ 120 (208)
+++.+++. +..+.+|+|.-. . ....++.+.+.|..-.++-.. ..+.++++.+. ..+++.++ +.. |.
T Consensus 49 ~i~~lr~~~~~~~i~ld~~l~d--~----p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~--~~ 120 (218)
T 3jr2_A 49 AVSTLRHNHPNHILVCDMKTTD--G----GAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYG--NW 120 (218)
T ss_dssp HHHHHHHHCTTSEEEEEEEECS--C----HHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCS--SC
T ss_pred HHHHHHHhCCCCcEEEEEeecc--c----HHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeee--cC
Confidence 44444432 247889999752 1 123456666777654445333 23333333221 12455553 222 22
Q ss_pred CchhhhHh--hhhcCceEeecc--------cccCHHHHHH---HHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 121 TGFRTNLL--RIRKAGVVGVYH--------PLIDEKLVRT---FHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 121 ~~~~~~~~--~~~~~~~~~~~~--------~~~~~~~v~~---~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
+. .+.. ...|++++.... ....+..++. +...++++.+= ++ +++.+..+++.|+|+++.=
T Consensus 121 T~--~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvG 194 (218)
T 3jr2_A 121 TM--QDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSITGGI-VPEDIYLFEGIKTKTFIAG 194 (218)
T ss_dssp CH--HHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSC-CGGGGGGGTTSCEEEEEES
T ss_pred CH--HHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEEEECCC-CHHHHHHHHHcCCCEEEEc
Confidence 22 2221 224777654321 1124444444 44447877654 56 5778888999999998764
No 137
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=60.03 E-value=12 Score=30.65 Aligned_cols=52 Identities=12% Similarity=0.040 Sum_probs=39.8
Q ss_pred hcCceEeecccc-cC---HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 131 RKAGVVGVYHPL-ID---EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 131 ~~~~~~~~~~~~-~~---~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.|++++.+.... .+ .+.++.+++. +++|.+=++.+.++++.+.+.|+|+|..
T Consensus 111 aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 111 AGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp TTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEE
Confidence 688877764321 12 3567888876 7888886788999999999999999984
No 138
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=59.56 E-value=28 Score=26.23 Aligned_cols=50 Identities=18% Similarity=0.258 Sum_probs=36.8
Q ss_pred HHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHH
Q 028497 146 KLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~ 195 (208)
+.++.+++ .++++.+- .++++++++.+++.|+|+|+.. +|..+.++++..
T Consensus 64 ~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~ 120 (253)
T 1thf_D 64 ELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTF 120 (253)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHc
Confidence 44555554 47888775 5788999999999999999875 466666666654
No 139
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=59.40 E-value=55 Score=26.18 Aligned_cols=107 Identities=9% Similarity=-0.017 Sum_probs=57.3
Q ss_pred HHHHHHHhcCCcceEEEee-----CHH---HHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeeccc------
Q 028497 76 DILSVIERTKCYNCLVWAK-----SDN---LVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHP------ 141 (208)
Q Consensus 76 ~v~~~l~~~~~~~~ii~Sf-----~~~---~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 141 (208)
.+.....+.|.. ..+.+. +.. ..+.+++..++.++....................|++.+.++..
T Consensus 77 ~~a~aa~~~G~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~ 155 (349)
T 1p0k_A 77 SLARAASQAGIP-LAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIV 155 (349)
T ss_dssp HHHHHHHHHTCC-EECCCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC-
T ss_pred HHHHHHHHcCCc-EEeccchhcccCcccccceehhhhhCCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhc
Confidence 455566666642 223222 221 22334555677777554431111111112234467777654322
Q ss_pred ------cc--CHHHHHHHHh-CCCeEEEeeC---CCHHHHHHHHhCCCCEEEcC
Q 028497 142 ------LI--DEKLVRTFHG-RNKRVFAWTV---DDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 142 ------~~--~~~~v~~~~~-~g~~v~~wtv---~~~~~~~~~~~~gvd~i~TD 183 (208)
.+ ..+.++.+++ .+++|.+=.+ -+.++++.+.+.|+|+|+..
T Consensus 156 ~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 156 MPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp -------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 11 1245677664 5888887432 46888999999999998874
No 140
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=59.16 E-value=20 Score=29.06 Aligned_cols=60 Identities=17% Similarity=0.288 Sum_probs=46.7
Q ss_pred HHHHHHHhC---CCeEEE-eeCCCHHHHHHHHhCCCCEEEc------CChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR---NKRVFA-WTVDDEDSMRKMLHERVDAVVT------SNPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~-wtv~~~~~~~~~~~~gvd~i~T------D~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+.+..++++ .++|.. -.+.+.+++.+++..|+|+|.. ..|..+.++.++++.-+.+.|+.
T Consensus 263 ~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~~~i~~~L~~~l~~~G~~ 332 (345)
T 3oix_A 263 ANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIFKRITKELXAIMTEKGYE 332 (345)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHHHHHHHHHHHHHHHcCCC
Confidence 456677665 478754 5789999999999999999864 46788888888888888888863
No 141
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=58.95 E-value=54 Score=24.55 Aligned_cols=92 Identities=11% Similarity=0.063 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHhcCCcceEEEee-----CHHHHHHHHhhccCCeEEEEEEecCCCc--hh----hhH-------hhhhcC
Q 028497 72 GLAKDILSVIERTKCYNCLVWAK-----SDNLVRDIMRLSSNVTAGYIIMVDPSTG--FR----TNL-------LRIRKA 133 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf-----~~~~l~~l~~~~p~~~~~~l~~~~~~~~--~~----~~~-------~~~~~~ 133 (208)
.....++++++++++.-..|... +++.++++.+ .+..+|-=....+... .. .++ .+..|.
T Consensus 45 ~~~~~il~iL~~~~v~ATfFv~g~~~~~~p~~~~~~~~--~GheIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~ 122 (230)
T 2y8u_A 45 EYTPQLLDLLSRYSARATFFVLGDAAAQNPGLLQRMRD--EGHQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGV 122 (230)
T ss_dssp TTHHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHH--TTCEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSS
T ss_pred hhHHHHHHHHHHcCCCEEEEEecHHHhHCHHHHHHHHH--CCCEEEecccCCCCcccCCHHHHHHHHHHHHHHHHHHhCC
Confidence 44567899999999865554432 4566777765 3355542211222110 11 111 122343
Q ss_pred --ceEeecccccCHHHHHHHHhCCCeEEEeeCCC
Q 028497 134 --GVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDD 165 (208)
Q Consensus 134 --~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~ 165 (208)
.++.+.+...++...+.+++.|+.+..|++++
T Consensus 123 ~~~~fr~P~G~~~~~~~~~l~~~G~~~~~w~~d~ 156 (230)
T 2y8u_A 123 APAYMRPPYLETNELVLQVMRDLDYRVISASVDT 156 (230)
T ss_dssp CBSEECCGGGCCCHHHHHHHHHTTCEEECCSEEC
T ss_pred CCcEEECCCCCCCHHHHHHHHHcCCEEEEecCCC
Confidence 45555666778999999999999999998753
No 142
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=58.85 E-value=6.6 Score=26.45 Aligned_cols=41 Identities=15% Similarity=0.478 Sum_probs=30.6
Q ss_pred hCCCeEEEeeCCCHHH-HHHHHhCCCCEEEcC----ChHHHHHHHH
Q 028497 153 GRNKRVFAWTVDDEDS-MRKMLHERVDAVVTS----NPILFQRVMQ 193 (208)
Q Consensus 153 ~~g~~v~~wtv~~~~~-~~~~~~~gvd~i~TD----~P~~~~~~~~ 193 (208)
+.|+.+++|-.++.+. ++++.+..+||+++- +-..+.+++.
T Consensus 62 DlG~el~~WKp~eVdkm~~k~~q~~~dGl~iYCDdeNk~~m~Ki~~ 107 (126)
T 2rbg_A 62 DIGYELFLWKKNEVDIFLKNLEKSEVDGLLVYCDDENKVFMSKIVD 107 (126)
T ss_dssp TSEEEEEEECGGGHHHHHHHHTTCCCCEEEEEECGGGHHHHHHHHH
T ss_pred ccceEEEEeCHHHHHHHHHHHHHhCCCceEEEeCCCchhHHHHHHH
Confidence 6899999999988765 577889999999872 4444555554
No 143
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=58.46 E-value=18 Score=29.51 Aligned_cols=43 Identities=7% Similarity=0.030 Sum_probs=35.7
Q ss_pred cccCHHHHHHHHhC-CCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 141 PLIDEKLVRTFHGR-NKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 141 ~~~~~~~v~~~~~~-g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+.++.+.++.+++. +++|.+=.+.+.++++.+.+.|+|+|+..
T Consensus 202 ~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 202 ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVS 245 (352)
T ss_dssp TTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEe
Confidence 44666778888764 88998888889999999999999999863
No 144
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=57.89 E-value=37 Score=25.85 Aligned_cols=58 Identities=10% Similarity=0.208 Sum_probs=44.6
Q ss_pred cCHHHHHH-HHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHHHhhhh
Q 028497 143 IDEKLVRT-FHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDIRTQCL 200 (208)
Q Consensus 143 ~~~~~v~~-~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~~~~~~ 200 (208)
...++++. ++.-.+++.+= ++++.++++++++.|++-|+-+ +|+.+.+..+.+-.+|-
T Consensus 62 ~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~i 126 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAI 126 (243)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTE
T ss_pred hHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceE
Confidence 34566655 45678887664 6899999999999999999877 78988888887755543
No 145
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=57.88 E-value=23 Score=27.87 Aligned_cols=50 Identities=14% Similarity=0.154 Sum_probs=37.7
Q ss_pred HHHHHHHhCCC--eEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHHH
Q 028497 146 KLVRTFHGRNK--RVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDIR 196 (208)
Q Consensus 146 ~~v~~~~~~g~--~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~~ 196 (208)
..++.++++.- ++.+ .+++.++++.+++.|+|.|+-| .|+.+++.++..+
T Consensus 183 ~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~~~~~~~~~v~~l~ 236 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRD 236 (284)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhh
Confidence 45666666543 5666 6678999999999999999999 5677777776654
No 146
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=57.73 E-value=31 Score=26.90 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=41.1
Q ss_pred ccCHHHHHHHHh-C-C-CeEEEe-eCCCHHHHHHHHhCCCCEEEcC-------ChHHHHHHHHH
Q 028497 142 LIDEKLVRTFHG-R-N-KRVFAW-TVDDEDSMRKMLHERVDAVVTS-------NPILFQRVMQD 194 (208)
Q Consensus 142 ~~~~~~v~~~~~-~-g-~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-------~P~~~~~~~~~ 194 (208)
..++++++.+++ . + ++|.+= ++.+++++..++++|+|||.-+ +|..+.+.+.+
T Consensus 162 i~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~ 225 (268)
T 2htm_A 162 VRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEAQDPPAMAEAFRL 225 (268)
T ss_dssp STTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTSSSHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHH
Confidence 346888888887 3 4 777764 5789999999999999998876 37766665553
No 147
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=57.61 E-value=81 Score=26.23 Aligned_cols=110 Identities=7% Similarity=0.044 Sum_probs=63.8
Q ss_pred HHHHHHhcCCcceEEEeeC--HHHHHHHHhhccC--CeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHH
Q 028497 77 ILSVIERTKCYNCLVWAKS--DNLVRDIMRLSSN--VTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFH 152 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~Sf~--~~~l~~l~~~~p~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 152 (208)
+.++.++++. ...+++.+ .+.++.+++..|. .++.+....++.. .........|+ . ....+..=+..++
T Consensus 40 l~~la~~~~t-P~~vid~~~l~~n~~~l~~~~~~~~~~i~yavKAn~~~-~v~~~l~~~G~-g----~dvaS~~E~~~~~ 112 (443)
T 3vab_A 40 LPEIAKAVGT-PFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQ-AVLTALAKLGA-G----ADTVSQGEIRRAL 112 (443)
T ss_dssp HHHHHHHHCS-SEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGGCCCH-HHHHHHHHTTC-E----EEESSHHHHHHHH
T ss_pred HHHHHhhcCC-CEEEEEHHHHHHHHHHHHHhhccCCcEEEEEeccCCCH-HHHHHHHHcCC-c----EEEeCHHHHHHHH
Confidence 4456667763 34444433 2456777777776 4444433333311 11122222443 1 2334555556777
Q ss_pred hCCCe--EEEeeC--CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 153 GRNKR--VFAWTV--DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 153 ~~g~~--v~~wtv--~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
+.|++ ..+|+. .++++++.+++.|+..+..|..+++.++-+
T Consensus 113 ~~G~~~~~I~~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~ 157 (443)
T 3vab_A 113 AAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSA 157 (443)
T ss_dssp HTTCCGGGEEEECTTCCHHHHHHHHHHTCSEEEECCHHHHHHHHH
T ss_pred HcCCChhhEEEcCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH
Confidence 78873 245543 478899999999998888899998886654
No 148
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=57.60 E-value=32 Score=25.94 Aligned_cols=52 Identities=17% Similarity=0.270 Sum_probs=38.7
Q ss_pred CHHHHHHHHh-CCCeEEE-eeCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHH
Q 028497 144 DEKLVRTFHG-RNKRVFA-WTVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 144 ~~~~v~~~~~-~g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~ 195 (208)
+.++++.+++ .++++.+ ..+++.++++.+++.|+|+|+-. +|..+.++.+.+
T Consensus 67 ~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~~ 125 (247)
T 3tdn_A 67 DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQTF 125 (247)
T ss_dssp CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHHH
T ss_pred cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHHh
Confidence 3566776654 5888865 46889999999999999999866 466666666544
No 149
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=57.59 E-value=13 Score=28.50 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=33.4
Q ss_pred cCHHHHHHHHhC--CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC
Q 028497 143 IDEKLVRTFHGR--NKRVFA-WTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 143 ~~~~~v~~~~~~--g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
...++++.+++. ++++.+ .+++++++++++.+ |+|+|+..
T Consensus 176 ~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 176 GNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred chHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 357888888765 688766 57999999999999 99999987
No 150
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=57.44 E-value=83 Score=26.17 Aligned_cols=110 Identities=8% Similarity=0.094 Sum_probs=58.1
Q ss_pred HHHHHHhcCCcceEEEeeC--HHHHHHHHhhccC--CeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHH
Q 028497 77 ILSVIERTKCYNCLVWAKS--DNLVRDIMRLSSN--VTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFH 152 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~Sf~--~~~l~~l~~~~p~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 152 (208)
+.++.++++. ...+++.+ .+.++.+++..|+ .++.+....++.. .........|+ . ....+..=+..++
T Consensus 43 l~~la~~~~T-P~~vidl~~l~~n~~~l~~~~~~~~~~i~yavKAn~~~-~v~~~l~~~G~-g----~dvaS~~E~~~~~ 115 (441)
T 3n2b_A 43 LADLANQYGT-PLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNL-GVLNTLARLGS-G----FDIVSVGELERVL 115 (441)
T ss_dssp HHHHHHHHCS-SEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGGCCCH-HHHHHHHHTTC-E----EEESSHHHHHHHH
T ss_pred HHHHHhhcCC-CEEEEEHHHHHHHHHHHHHhhccCCcEEEEEeccCCCH-HHHHHHHHcCC-c----EEEeCHHHHHHHH
Confidence 4455566663 33333332 2345666666665 3343333222211 11111122343 1 2234454456667
Q ss_pred hCCCe--EEEeeC--CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 153 GRNKR--VFAWTV--DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 153 ~~g~~--v~~wtv--~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
+.|++ ..+|+. .++++++.+++.|+..+..|...++.++-+
T Consensus 116 ~~G~~~~~I~~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~ 160 (441)
T 3n2b_A 116 AAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNK 160 (441)
T ss_dssp HTTCCGGGEEECCTTCCHHHHHHHHHTTCSEEEECSHHHHHHHHH
T ss_pred HcCCCcccEEEcCCCCCHHHHHHHHHCCCCEEEEcCHHHHHHHHH
Confidence 77873 345543 467888888888888778888888776544
No 151
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=56.91 E-value=11 Score=31.20 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCeEEEeeC--------------CCHHHHHHHHhCCCCEEEcCC
Q 028497 145 EKLVRTFHGRNKRVFAWTV--------------DDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv--------------~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.+++++|++|+++.+|.- ....+++.+.+.|||+|=.|+
T Consensus 77 ~~l~~~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 130 (397)
T 3a5v_A 77 KPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTWAKWGIDYLKYDN 130 (397)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccCCCHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 5789999999999999852 124577888899999999996
No 152
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=56.22 E-value=25 Score=26.48 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=36.2
Q ss_pred HHHHHHHh-CCCeEEE-eeCCCHHHHHHHHhCCCCEEEcCC-----hHHHHHHHHHH
Q 028497 146 KLVRTFHG-RNKRVFA-WTVDDEDSMRKMLHERVDAVVTSN-----PILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~-~g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD~-----P~~~~~~~~~~ 195 (208)
+.++.+++ .++++.+ -.+++.++++.+++.|+|+|+... |+.+.++.+..
T Consensus 65 ~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 65 DVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc
Confidence 34555544 4788876 567899999999999999998764 55566666544
No 153
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=56.04 E-value=62 Score=24.28 Aligned_cols=96 Identities=10% Similarity=0.013 Sum_probs=52.2
Q ss_pred CCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEEecCC
Q 028497 41 ITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPS 120 (208)
Q Consensus 41 iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~ 120 (208)
..+++.+++.+...+..+.+=....+..........++++.++.|..-.+.+...++.++.+|+..|+ .+.+.-...+.
T Consensus 91 ~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~g~~GvV~sat~p~e~~~ir~~~~~-~~~vtPGI~~~ 169 (222)
T 4dbe_A 91 KGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGGTKLDHITQYRRDFEK-MTIVSPGMGSQ 169 (222)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHHCCSEEEECTTCHHHHHHHHHHCTT-CEEEECCBSTT
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHhCCCEEEECCCCHHHHHHHHHhCCC-CEEEcCCcccC
Confidence 46899998887654334543223222222123446677788887854444444567888999998887 33222222232
Q ss_pred CchhhhHhhhhcCceEee
Q 028497 121 TGFRTNLLRIRKAGVVGV 138 (208)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~ 138 (208)
...+.+..+ .|++++.+
T Consensus 170 g~tp~~a~~-~Gad~iVV 186 (222)
T 4dbe_A 170 GGSYGDAVC-AGADYEII 186 (222)
T ss_dssp SBCTTHHHH-HTCSEEEE
T ss_pred ccCHHHHHH-cCCCEEEE
Confidence 222333333 67776543
No 154
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=55.71 E-value=43 Score=22.34 Aligned_cols=51 Identities=16% Similarity=0.295 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCCeEEE-eeCCCHH----HHHHHHhCCCCEEEcCChHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFA-WTVDDED----SMRKMLHERVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~-wtv~~~~----~~~~~~~~gvd~i~TD~P~~~~~~~~~~ 195 (208)
.++++.++.+|+.|++ |.-.+.+ .-+.+..-|||.-+....+.+.+.+++.
T Consensus 93 kdfieeakergvevfvvynnkdddrrkeaqqefrsdgvdvrtvsdkeelieqvrrf 148 (162)
T 2l82_A 93 KDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSDKEELIEQVRRF 148 (162)
T ss_dssp HHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHCCSSCEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcEEEEEecCCCchhHHHHHHHhhhcCceeeecCCHHHHHHHHHHH
Confidence 5778999999999876 4433332 2333446789988777777776666654
No 155
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=55.06 E-value=83 Score=25.99 Aligned_cols=49 Identities=8% Similarity=0.141 Sum_probs=25.7
Q ss_pred CHHHHHHHHhCCCe--EEEee--CCCHHHHHHHHhCCCCEEEcCChHHHHHHH
Q 028497 144 DEKLVRTFHGRNKR--VFAWT--VDDEDSMRKMLHERVDAVVTSNPILFQRVM 192 (208)
Q Consensus 144 ~~~~v~~~~~~g~~--v~~wt--v~~~~~~~~~~~~gvd~i~TD~P~~~~~~~ 192 (208)
+..=+..+++.|+. -.+|+ ..++++++.+++.|+..+..|...++.++-
T Consensus 91 S~~E~~~~~~~G~~~~~Ii~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~ 143 (424)
T 7odc_A 91 SKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVA 143 (424)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHcCCChhhEEECCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHH
Confidence 33334455556653 12332 234566666666666655666666655443
No 156
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=54.63 E-value=35 Score=23.42 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEc---CChHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVT---SNPILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~T---D~P~~~~~~~~~~ 195 (208)
...++.++++|+++.+-|-++...++..+ .+|++.++. +.|..+..+++++
T Consensus 37 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~ 91 (164)
T 3e8m_A 37 SAGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDKLSAAEELCNEL 91 (164)
T ss_dssp HHHHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecccCChHHHHHHHHHHc
Confidence 34689999999999999977755555544 689888776 4667777777665
No 157
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=54.12 E-value=64 Score=23.88 Aligned_cols=85 Identities=9% Similarity=0.012 Sum_probs=45.1
Q ss_pred eCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeeccc--c--cCHHHHHHHHhCCCeEEEeeC-CCHHH
Q 028497 94 KSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHP--L--IDEKLVRTFHGRNKRVFAWTV-DDEDS 168 (208)
Q Consensus 94 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~v~~~~~~g~~v~~wtv-~~~~~ 168 (208)
+..+.++.+++.. +.++.+....++.... -+.+...|++++.++.. . ...+.++.+++.|+.+.+=.. .++.+
T Consensus 55 ~~~~~i~~l~~~~-~~~~~v~l~vnd~~~~-v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e 132 (230)
T 1rpx_A 55 IGPLVVDSLRPIT-DLPLDVHLMIVEPDQR-VPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLT 132 (230)
T ss_dssp CCHHHHHHHGGGC-CSCEEEEEESSSHHHH-HHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGG
T ss_pred cCHHHHHHHHhcc-CCcEEEEEEecCHHHH-HHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHH
Confidence 4467788888764 3333322222221101 12224488998876654 2 224678889899987654331 23322
Q ss_pred HHHHHhCCCCEE
Q 028497 169 MRKMLHERVDAV 180 (208)
Q Consensus 169 ~~~~~~~gvd~i 180 (208)
....+..++|.|
T Consensus 133 ~~~~~~~~~d~v 144 (230)
T 1rpx_A 133 AIEYVLDAVDLV 144 (230)
T ss_dssp GGTTTTTTCSEE
T ss_pred HHHHHHhhCCEE
Confidence 222334567877
No 158
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=54.10 E-value=41 Score=21.68 Aligned_cols=49 Identities=10% Similarity=0.247 Sum_probs=31.6
Q ss_pred HHHHHHHhCC----CeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHGRN----KRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~~g----~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++.+ ..+.+.+..+......+++.|++++++- .+..+.+.+++
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~ 121 (132)
T 3lte_A 67 DVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPFDNDALLDRIHD 121 (132)
T ss_dssp HHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCCCHHHHHHHHHH
Confidence 4556666543 4555555555557888999999999885 45555555543
No 159
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=54.00 E-value=24 Score=27.82 Aligned_cols=48 Identities=15% Similarity=0.219 Sum_probs=35.3
Q ss_pred HHHHHHhCC---CeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 147 LVRTFHGRN---KRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 147 ~v~~~~~~g---~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
-++.+++.. +++.+ .+++.++++++++.|+|.|..| +|..+++.++..
T Consensus 185 av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~~~~~~k~av~~v 237 (286)
T 1x1o_A 185 AVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNFPLEALREAVRRV 237 (286)
T ss_dssp HHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 355555432 55666 7788999999999999999999 567777666544
No 160
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=53.97 E-value=60 Score=24.38 Aligned_cols=37 Identities=8% Similarity=0.281 Sum_probs=20.4
Q ss_pred HHHHHHHhCCCeEEEeeCC-CH----HHHHHHHhCCCCEEEc
Q 028497 146 KLVRTFHGRNKRVFAWTVD-DE----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~-~~----~~~~~~~~~gvd~i~T 182 (208)
.+-+.+.++|+.+.+...+ +. ..++.++..++|||+.
T Consensus 26 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi 67 (291)
T 3l49_A 26 AQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIE 67 (291)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 3345566667766655433 22 2345555667777764
No 161
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=53.94 E-value=48 Score=27.48 Aligned_cols=71 Identities=10% Similarity=0.062 Sum_probs=49.2
Q ss_pred hcCceEeecccccCH---HHHHHHHhCCCeEEEe-eCCC---------HHHHHHHHhCCCCEEEcC---ChHHHHHHHHH
Q 028497 131 RKAGVVGVYHPLIDE---KLVRTFHGRNKRVFAW-TVDD---------EDSMRKMLHERVDAVVTS---NPILFQRVMQD 194 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~---~~v~~~~~~g~~v~~w-tv~~---------~~~~~~~~~~gvd~i~TD---~P~~~~~~~~~ 194 (208)
.|+|++.++.-.-.. ..++.++..|++++++ |+.+ .+.+..+.+.|+++|-.| -|+.+..++++
T Consensus 151 ~GvDlll~ETi~~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~~~~~avGvNC~~gP~~~~~~l~~ 230 (406)
T 1lt8_A 151 KNVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCHFDPTISLKTVKL 230 (406)
T ss_dssp HTCSEEEECCCSCHHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHHHHTTTCSEEEEESSSCHHHHHHHHHH
T ss_pred CCCCEEEEcccCCHHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHHhhcCCCCEEEecCCCCHHHHHHHHHH
Confidence 678988776432222 3466677789999887 4421 245666677899988877 49999999998
Q ss_pred HHhhhhh
Q 028497 195 IRTQCLE 201 (208)
Q Consensus 195 ~~~~~~~ 201 (208)
++..+..
T Consensus 231 l~~~~~~ 237 (406)
T 1lt8_A 231 MKEGLEA 237 (406)
T ss_dssp HHHHHHT
T ss_pred HHHhhhh
Confidence 8765533
No 162
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=53.78 E-value=50 Score=22.54 Aligned_cols=47 Identities=11% Similarity=0.044 Sum_probs=27.5
Q ss_pred HHHHHHHhCC---CeEEEee--CCCHHH----HHHHHhCCCCEEEcC--ChHHHHHHH
Q 028497 146 KLVRTFHGRN---KRVFAWT--VDDEDS----MRKMLHERVDAVVTS--NPILFQRVM 192 (208)
Q Consensus 146 ~~v~~~~~~g---~~v~~wt--v~~~~~----~~~~~~~gvd~i~TD--~P~~~~~~~ 192 (208)
++++.++++| +++++=+ +..+.+ .+.+.++|+|+++++ .+..+.+.+
T Consensus 73 ~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~~~~~~~~~l 130 (137)
T 1ccw_A 73 GLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTPPEVGIADL 130 (137)
T ss_dssp THHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCCCHHHHHHHH
Confidence 4566676665 4455544 222222 456889999999987 444444444
No 163
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=52.92 E-value=51 Score=22.49 Aligned_cols=51 Identities=6% Similarity=0.081 Sum_probs=36.2
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHH-HhCCCCEEEcC---ChHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKM-LHERVDAVVTS---NPILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~-~~~gvd~i~TD---~P~~~~~~~~~~ 195 (208)
.+.++.++++|+++.+-|-+....++.. -.+|++.++.. .|..+..+++++
T Consensus 42 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~ 96 (162)
T 2p9j_A 42 GIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTGSYKKLEIYEKIKEKY 96 (162)
T ss_dssp HHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEECC--CHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccCCCCCHHHHHHHHHHc
Confidence 4788999999999999997765555554 46788877653 566656666543
No 164
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=52.74 E-value=29 Score=22.49 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=31.1
Q ss_pred HHHHHHHhC----CCeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHGR----NKRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~~----g~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++. +.++.+.+.........+...|++++++- .+..+.+.++.
T Consensus 64 ~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~ 118 (133)
T 3nhm_A 64 ALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQLHA 118 (133)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHHHHH
Confidence 566666664 67888888765444478889999998875 55555555554
No 165
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=52.74 E-value=72 Score=24.09 Aligned_cols=132 Identities=13% Similarity=0.175 Sum_probs=76.8
Q ss_pred HHHHHHHHhcC-CceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEE-EeeCHHHHHHHHhhc-cCCeEEEEEEecCC
Q 028497 44 IEDALTLVSNS-VRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLV-WAKSDNLVRDIMRLS-SNVTAGYIIMVDPS 120 (208)
Q Consensus 44 L~evL~~~~~~-~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii-~Sf~~~~l~~l~~~~-p~~~~~~l~~~~~~ 120 (208)
+.|++..+.+. +-.+.+|+-..+ . ..+++.-.++.+-+ ++.+| .-..++-++.++.+. -++++-...-+.+.
T Consensus 42 ~~~~~~ei~~~v~G~Vs~EV~a~d--~-e~mi~eA~~L~~~~--~nv~IKIP~T~eGl~A~~~L~~~GI~vn~TlifS~~ 116 (223)
T 3s1x_A 42 YGDIIREILKIVDGPVSVEVVSTK--Y-EGMVEEARKIHGLG--DNAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFNPI 116 (223)
T ss_dssp HHHHHHHHHHHCSSCEEEECCCCS--H-HHHHHHHHHHHHTC--TTEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHH
T ss_pred HHHHHHHHHHhCCCCEEEEEccCC--H-HHHHHHHHHHHHhC--CCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHH
Confidence 44554443321 116778876432 1 25555544444332 46666 566777777776653 36777555433221
Q ss_pred CchhhhHhhhhcCceEeeccccc-----C-----HHHHHHHHhCCCe--EEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 121 TGFRTNLLRIRKAGVVGVYHPLI-----D-----EKLVRTFHGRNKR--VFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~v~~~~~~g~~--v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+ .-++...|+++++++..-+ + .++.+.++.+|.+ +.+=.+.+..++..+...|+|.++.-
T Consensus 117 Q---A~~Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~IlaAS~Rn~~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 117 Q---ALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVP 188 (223)
T ss_dssp H---HHHHHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEBSCCSHHHHHHHHHHTCSEEEEC
T ss_pred H---HHHHHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHHHcCCCEEEeC
Confidence 1 1223347899888754311 1 3445566777755 45556899999999999999997653
No 166
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=52.63 E-value=20 Score=26.83 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=35.0
Q ss_pred HHHHHHH-hCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHH
Q 028497 146 KLVRTFH-GRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~-~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~ 195 (208)
+.++.++ ..++++.+- ++++.++++.+++.|+|+|... +|..+.++.+.+
T Consensus 67 ~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~ 123 (253)
T 1h5y_A 67 DSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQLVALLAREF 123 (253)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhCcHHHHHHHHHc
Confidence 3455554 347887754 5788999999999999999955 455566555543
No 167
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=52.56 E-value=35 Score=29.04 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=39.8
Q ss_pred hcCceEeeccccc-C---HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 131 RKAGVVGVYHPLI-D---EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 131 ~~~~~~~~~~~~~-~---~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.|++++.+....- . .+.++.+++. ++++.+-++.+.+.++.+.+.|+|+|..
T Consensus 242 aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 242 AGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred ccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEE
Confidence 5788776643322 1 2567777765 7889888899999999999999999984
No 168
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=52.22 E-value=29 Score=26.46 Aligned_cols=50 Identities=8% Similarity=0.153 Sum_probs=35.8
Q ss_pred CHHHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC--------ChHHHHHHHH
Q 028497 144 DEKLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHERVDAVVTS--------NPILFQRVMQ 193 (208)
Q Consensus 144 ~~~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD--------~P~~~~~~~~ 193 (208)
..+.++.+.+ .++++.+- .+++.+++..+++.|+|+++.. .|..+.++++
T Consensus 62 ~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 62 DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHH
Confidence 3566666654 58888874 5688899999999999998876 3555555543
No 169
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=51.86 E-value=70 Score=27.70 Aligned_cols=105 Identities=10% Similarity=-0.001 Sum_probs=62.1
Q ss_pred HHHHHHHHHhcCCcceEEEee---C---HHHHHHHHhhccCCeEEEEEEecCCCch-hhhHhhhhcCceEeec-------
Q 028497 74 AKDILSVIERTKCYNCLVWAK---S---DNLVRDIMRLSSNVTAGYIIMVDPSTGF-RTNLLRIRKAGVVGVY------- 139 (208)
Q Consensus 74 ~~~v~~~l~~~~~~~~ii~Sf---~---~~~l~~l~~~~p~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~------- 139 (208)
.+++. .|-+.|..-.+|-+. + .+.++++++.+|++++. .. +-.++. ...+.+ .|++++-+-
T Consensus 283 ~eR~~-aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~vi--aG-NVaT~e~a~~Li~-aGAD~vkVGiGpGSiC 357 (556)
T 4af0_A 283 KDRLK-LLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVI--AG-NVVTREQAAQLIA-AGADGLRIGMGSGSIC 357 (556)
T ss_dssp HHHHH-HHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEE--EE-EECSHHHHHHHHH-HTCSEEEECSSCSTTB
T ss_pred HHHHH-HHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEE--ec-cccCHHHHHHHHH-cCCCEEeecCCCCccc
Confidence 34444 444556533344232 2 24678888889998873 22 111211 123333 677765321
Q ss_pred ---------ccccC--HHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 140 ---------HPLID--EKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 140 ---------~~~~~--~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
.+.++ .+..+.+++.|++|..- ++....++.+++.+|+|.|+--
T Consensus 358 tTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 358 ITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMG 413 (556)
T ss_dssp CCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEc
Confidence 11111 13455678899998886 4788999999999999999854
No 170
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=51.65 E-value=1.1e+02 Score=25.83 Aligned_cols=104 Identities=12% Similarity=0.119 Sum_probs=64.2
Q ss_pred HHHHHHHHhhccCCeEEEEEEec--CCC--ch----hh--hHhhhhcCceEeecccccC----HHHHHHHHhCCCeEEEe
Q 028497 96 DNLVRDIMRLSSNVTAGYIIMVD--PST--GF----RT--NLLRIRKAGVVGVYHPLID----EKLVRTFHGRNKRVFAW 161 (208)
Q Consensus 96 ~~~l~~l~~~~p~~~~~~l~~~~--~~~--~~----~~--~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~g~~v~~w 161 (208)
.+.++.+++..|+.++..+.... .+. +. .. +.+...|.+.+.+....-+ ...++.+++.|+.|.+.
T Consensus 67 ~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~ 146 (464)
T 2nx9_A 67 WQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGT 146 (464)
T ss_dssp HHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEE
Confidence 35788888777888887665321 110 00 01 1123367887776543222 35688899999998532
Q ss_pred ---eCC---CH----HHHHHHHhCCCCEEE-cC-----ChHHHHHHHHHHHhhh
Q 028497 162 ---TVD---DE----DSMRKMLHERVDAVV-TS-----NPILFQRVMQDIRTQC 199 (208)
Q Consensus 162 ---tv~---~~----~~~~~~~~~gvd~i~-TD-----~P~~~~~~~~~~~~~~ 199 (208)
+.. +. +.++.+.++|++.|. .| .|..+.++++..+...
T Consensus 147 i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 147 LCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp EECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC
T ss_pred EEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc
Confidence 222 33 346667899999874 33 7999999998876543
No 171
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=51.62 E-value=19 Score=29.18 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=32.7
Q ss_pred HHHHHHHHhCCCeEEEeeC------C---------CHHHHHHHHhCCCCEEEcCCh
Q 028497 145 EKLVRTFHGRNKRVFAWTV------D---------DEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv------~---------~~~~~~~~~~~gvd~i~TD~P 185 (208)
+.+++++|++|+++.+|.- . ....++.+.+.|||+|=.|+.
T Consensus 77 ~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 77 KALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECcc
Confidence 6789999999999999852 1 134677788999999999963
No 172
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=51.42 E-value=46 Score=24.84 Aligned_cols=50 Identities=22% Similarity=0.279 Sum_probs=37.6
Q ss_pred HHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHH
Q 028497 146 KLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~ 195 (208)
+.++.+++ .++++.+= .++++++++.+++.|+|+|+.. +|..+.++++..
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~ 120 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEH 120 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHc
Confidence 55666544 58888763 6788999999999999999876 566677776654
No 173
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=51.38 E-value=75 Score=23.87 Aligned_cols=92 Identities=12% Similarity=0.185 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHhcCCcceEEEee-----CHHHHHHHHhhccCCeEEEEEEecCCCc--hh----hhH-------hhhhcC
Q 028497 72 GLAKDILSVIERTKCYNCLVWAK-----SDNLVRDIMRLSSNVTAGYIIMVDPSTG--FR----TNL-------LRIRKA 133 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf-----~~~~l~~l~~~~p~~~~~~l~~~~~~~~--~~----~~~-------~~~~~~ 133 (208)
.....++++++++++.-..|... +++.++++.+. +..+|-=...++... .. .++ .+..|.
T Consensus 56 ~~t~~il~iL~~~~v~ATfFv~g~~~~~~p~~~~~~~~~--GheIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~ 133 (240)
T 1ny1_A 56 GYTPKVLDVLKKHRVTGTFFVTGHFVKDQPQLIKRMSDE--GHIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGK 133 (240)
T ss_dssp SCHHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHHT--TCEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHSC
T ss_pred ccHHHHHHHHHHcCCCEEEEEeChhhhhCHHHHHHHHHC--cCChhcCCccccccccCCHHHHHHHHHHHHHHHHHHhCC
Confidence 34567899999999865555432 45667777652 345542111122110 11 111 122343
Q ss_pred ---ceEeecccccCHHHHHHHHhCCCeEEEeeCCC
Q 028497 134 ---GVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDD 165 (208)
Q Consensus 134 ---~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~ 165 (208)
.++.+.+...++..++.+++.|+.+..|+++.
T Consensus 134 ~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~w~~d~ 168 (240)
T 1ny1_A 134 QDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAF 168 (240)
T ss_dssp CCCCEECCGGGEECHHHHHHHHHTTCEEBCCSBCC
T ss_pred CCCcEEeCCCCCCCHHHHHHHHHcCCEEEECcccc
Confidence 44555566678899999999999999998753
No 174
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus} PDB: 2plk_A*
Probab=51.10 E-value=70 Score=26.34 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=12.0
Q ss_pred CHHHHHHHHhCCCCEEEcCChHHHH
Q 028497 165 DEDSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 165 ~~~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
++++++.+++.|+..+..|.++++.
T Consensus 133 ~~~~l~~a~~~~v~~~~vds~~el~ 157 (419)
T 2plj_A 133 RDADIRDALAYGCNVFVVDNLNELE 157 (419)
T ss_dssp CHHHHHHHHHHTCCEEEECSHHHHH
T ss_pred CHHHHHHHHHCCCCEEEeCCHHHHH
Confidence 3444555555554444444444444
No 175
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=51.04 E-value=67 Score=23.21 Aligned_cols=118 Identities=11% Similarity=0.021 Sum_probs=61.0
Q ss_pred ceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEe-eCHHHHHHHHhhcc--CCeEEEEEEecCCCch-hhhHhhhh
Q 028497 56 RKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWA-KSDNLVRDIMRLSS--NVTAGYIIMVDPSTGF-RTNLLRIR 131 (208)
Q Consensus 56 ~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~S-f~~~~l~~l~~~~p--~~~~~~l~~~~~~~~~-~~~~~~~~ 131 (208)
..+.+++|..+ .....++...+.|..-.++.. .....+..+++... +.++|.... .+.... ........
T Consensus 54 ~~i~~~l~~~d------i~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~-s~~~p~~~~~~~~~~ 126 (207)
T 3ajx_A 54 KIVFADMKTMD------AGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLI-GIEDKATRAQEVRAL 126 (207)
T ss_dssp SEEEEEEEECS------CHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECT-TCSSHHHHHHHHHHT
T ss_pred CeEEEEEEecC------ccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEe-cCCChHHHHHHHHHh
Confidence 57999999653 123345666677764444433 23344444443321 455555332 221111 01111235
Q ss_pred cCceEeecc-------c--ccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEE
Q 028497 132 KAGVVGVYH-------P--LIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVV 181 (208)
Q Consensus 132 ~~~~~~~~~-------~--~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~ 181 (208)
|++++.... . ... +.++.+...++++.+=+.-+++....+++.|+|+|+
T Consensus 127 g~d~v~~~~~~~~~~~g~~~~~-~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aGad~vv 184 (207)
T 3ajx_A 127 GAKFVEMHAGLDEQAKPGFDLN-GLLAAGEKARVPFSVAGGVKVATIPAVQKAGAEVAV 184 (207)
T ss_dssp TCSEEEEECCHHHHTSTTCCTH-HHHHHHHHHTSCEEEESSCCGGGHHHHHHTTCSEEE
T ss_pred CCCEEEEEecccccccCCCchH-HHHHHhhCCCCCEEEECCcCHHHHHHHHHcCCCEEE
Confidence 777762211 1 111 555555543677765543347788888999999996
No 176
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=50.94 E-value=71 Score=23.47 Aligned_cols=88 Identities=13% Similarity=-0.073 Sum_probs=52.4
Q ss_pred EeeCHHHHHHHHhhccCCeEEEEEEec--CCCchhhhHhhhhcCceEeecccccC---HHHHHHHHhCCCeEEE--e-eC
Q 028497 92 WAKSDNLVRDIMRLSSNVTAGYIIMVD--PSTGFRTNLLRIRKAGVVGVYHPLID---EKLVRTFHGRNKRVFA--W-TV 163 (208)
Q Consensus 92 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~g~~v~~--w-tv 163 (208)
.++-+..++.+++..|+.++-+-.-.. |.+ ..+.....|++++.++...-. ...++.+++.|.++.+ - .+
T Consensus 40 ~~~G~~~i~~l~~~~p~~~v~lD~kl~dip~t--~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~ 117 (216)
T 1q6o_A 40 VGEGVRAVRDLKALYPHKIVLADAKIADAGKI--LSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW 117 (216)
T ss_dssp HHHCTHHHHHHHHHCTTSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred HHhCHHHHHHHHHhCCCCeEEEEEEecccHHH--HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC
Confidence 456677899999987777765433221 111 112223489998887654321 3567778889999653 2 33
Q ss_pred CCHHHHHHHHhCCCCEEEc
Q 028497 164 DDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 164 ~~~~~~~~~~~~gvd~i~T 182 (208)
+ ....+.+...|++.+++
T Consensus 118 t-~~~~~~l~~~~~~~~vl 135 (216)
T 1q6o_A 118 T-WEQAQQWRDAGIGQVVY 135 (216)
T ss_dssp C-HHHHHHHHHTTCCEEEE
T ss_pred C-hhhHHHHHhcCcHHHHH
Confidence 3 44556666667665554
No 177
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=50.83 E-value=43 Score=26.03 Aligned_cols=38 Identities=21% Similarity=0.263 Sum_probs=24.6
Q ss_pred HHHHHHHhC-CCeEEEeeC-C------CHHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGR-NKRVFAWTV-D------DEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~-g~~v~~wtv-~------~~~~~~~~~~~gvd~i~TD 183 (208)
+.++.+++. .+++.+-+- | ....++.+.+.|+||++.-
T Consensus 81 ~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~ 126 (271)
T 1ujp_A 81 ELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP 126 (271)
T ss_dssp HHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT
T ss_pred HHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec
Confidence 456666665 678777332 1 2456777888999976653
No 178
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=50.60 E-value=1.2e+02 Score=26.10 Aligned_cols=104 Identities=12% Similarity=0.147 Sum_probs=63.3
Q ss_pred HHHHHHHHhhccCCeEEEEEEec--CC--Cc----hhh--hHhhhhcCceEeecccccC----HHHHHHHHhCCCeEEE-
Q 028497 96 DNLVRDIMRLSSNVTAGYIIMVD--PS--TG----FRT--NLLRIRKAGVVGVYHPLID----EKLVRTFHGRNKRVFA- 160 (208)
Q Consensus 96 ~~~l~~l~~~~p~~~~~~l~~~~--~~--~~----~~~--~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~g~~v~~- 160 (208)
.+.++.+++..|+.++..+.... .+ .+ ... +.+...|.+.+.+....-+ ...++.+++.|+.+.+
T Consensus 84 ~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~ 163 (539)
T 1rqb_A 84 WERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGT 163 (539)
T ss_dssp HHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEE
Confidence 45788888777888887665311 11 00 001 1123367787776543222 3568889999999842
Q ss_pred --eeC---CCH----HHHHHHHhCCCCEEE-cC-----ChHHHHHHHHHHHhhh
Q 028497 161 --WTV---DDE----DSMRKMLHERVDAVV-TS-----NPILFQRVMQDIRTQC 199 (208)
Q Consensus 161 --wtv---~~~----~~~~~~~~~gvd~i~-TD-----~P~~~~~~~~~~~~~~ 199 (208)
++. .+. +.++.+.++|++.|. .| .|..+.++++..+...
T Consensus 164 i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 164 ICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp EECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHH
T ss_pred EEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhc
Confidence 222 133 346667789999873 33 7999999888776543
No 179
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=50.24 E-value=64 Score=29.17 Aligned_cols=65 Identities=15% Similarity=0.129 Sum_probs=42.8
Q ss_pred hhhcCceEeecccc-----cCHHHHHHHHhCCC---eEEEeeCCCHHHHHHHHhCCCCEEEc---CChHHHHHHHH
Q 028497 129 RIRKAGVVGVYHPL-----IDEKLVRTFHGRNK---RVFAWTVDDEDSMRKMLHERVDAVVT---SNPILFQRVMQ 193 (208)
Q Consensus 129 ~~~~~~~~~~~~~~-----~~~~~v~~~~~~g~---~v~~wtv~~~~~~~~~~~~gvd~i~T---D~P~~~~~~~~ 193 (208)
...+++++.+.... .-+.+++.++++|. +|.+=++--..+...+.+.|+|++++ |-++.+..+.+
T Consensus 652 ~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG~~P~~d~~~l~~~GaD~~f~pgtd~~e~~~~i~~ 727 (762)
T 2xij_A 652 VDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAVQVLD 727 (762)
T ss_dssp HHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTCCEEECTTCCHHHHHHHHHH
T ss_pred HHcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccHHHHHhCCCCEEeCCCCCHHHHHHHHHH
Confidence 34677776553221 22677888999887 56666645555677889999999998 55555544433
No 180
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=49.82 E-value=1.1e+02 Score=25.46 Aligned_cols=110 Identities=6% Similarity=-0.006 Sum_probs=65.3
Q ss_pred HHHHHHhcCCcceEEEeeC--HHHHHHHHhhc-cCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHh
Q 028497 77 ILSVIERTKCYNCLVWAKS--DNLVRDIMRLS-SNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHG 153 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~Sf~--~~~l~~l~~~~-p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 153 (208)
+.+++++++. ...+++-+ .+.++.+++.. +++++.+....++.... .......|+ . ....+..=+..+++
T Consensus 33 l~~l~~~~~t-P~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan~~~~v-~~~l~~~G~-g----~~vas~~E~~~~~~ 105 (467)
T 2o0t_A 33 LTQLAQEYGT-PLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEV-ARWISEEGL-C----LDVCTGGELAVALH 105 (467)
T ss_dssp HHHHHHHHCS-SEEEEEHHHHHHHHHHHHHHTSSGGGBEEEGGGCCCHHH-HHHHHHHTC-E----EEECSHHHHHHHHH
T ss_pred HHHHHhhcCC-CEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeccCCCHHH-HHHHHHcCC-e----EEEeCHHHHHHHHH
Confidence 3445666663 33344332 23456677665 56777655543332111 122223453 2 23345555667777
Q ss_pred CCCe---EEEeeC-CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 154 RNKR---VFAWTV-DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 154 ~g~~---v~~wtv-~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
.|++ +.+... .++++++.+++.|++.+..|.+.++.++-+
T Consensus 106 ~G~~~~~I~~~g~~k~~~~i~~a~~~gv~~i~vds~~el~~l~~ 149 (467)
T 2o0t_A 106 ASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDA 149 (467)
T ss_dssp TTCCGGGEEECCTTCCHHHHHHHHHHTCSEEEECSHHHHHHHHH
T ss_pred cCCCcccEEEeCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH
Confidence 7873 555554 467899999999998899999999887654
No 181
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=49.78 E-value=62 Score=27.46 Aligned_cols=104 Identities=11% Similarity=-0.029 Sum_probs=60.3
Q ss_pred HHHHhcCCcceEE-Eee-C----HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecc--c-c-------
Q 028497 79 SVIERTKCYNCLV-WAK-S----DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYH--P-L------- 142 (208)
Q Consensus 79 ~~l~~~~~~~~ii-~Sf-~----~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~------- 142 (208)
+.+.+.|..-..+ .+. + .+.++++++..|++++..- ... .......+...|++++.+-. . .
T Consensus 261 ~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~-~v~--t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~ 337 (514)
T 1jcn_A 261 DLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGG-NVV--TAAQAKNLIDAGVDGLRVGMGCGSICITQEVM 337 (514)
T ss_dssp HHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEE-EEC--SHHHHHHHHHHTCSEEEECSSCSCCBTTBCCC
T ss_pred HHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEec-ccc--hHHHHHHHHHcCCCEEEECCCCCccccccccc
Confidence 3444567644444 232 2 3678889988888887542 111 11111222347888774310 0 0
Q ss_pred -c---C---HHHHHHH-HhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 143 -I---D---EKLVRTF-HGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 143 -~---~---~~~v~~~-~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
. . -..+..+ +..+++|.+- ++.+..++.+++.+|++++.--.+
T Consensus 338 ~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~iG~~ 389 (514)
T 1jcn_A 338 ACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSL 389 (514)
T ss_dssp SCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred CCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeeeECHH
Confidence 0 1 1233433 3458888775 578999999999999999986653
No 182
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=49.19 E-value=82 Score=27.14 Aligned_cols=56 Identities=13% Similarity=0.068 Sum_probs=41.8
Q ss_pred hHhhhhcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCC---CCEEEc
Q 028497 126 NLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHER---VDAVVT 182 (208)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~g---vd~i~T 182 (208)
+++...+++.++.....+....++.....+..+.+ ++++.+++..+.+.| +|+|..
T Consensus 79 dlA~~~gAdGVHLgq~dl~~~~ar~~lg~~~iiG~-S~ht~eea~~A~~~G~~~aDYv~~ 137 (540)
T 3nl6_A 79 DVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGW-SVGFPEEVDELSKMGPDMVDYIGV 137 (540)
T ss_dssp HHHHHTTCSEEEECTTSSCHHHHHHHHCTTSEEEE-EECSHHHHHHHHHTCC--CCEEEE
T ss_pred HHHHHcCCCEEEEChhhcCHHHHHHHhCCCCEEEE-ECCCHHHHHHHHHcCCCCCCEEEE
Confidence 45556888888876666666666666666665544 557899999999999 999886
No 183
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=49.15 E-value=90 Score=24.16 Aligned_cols=111 Identities=12% Similarity=0.062 Sum_probs=63.2
Q ss_pred HHHHhcCCcceEEEe--eCHHHHHHHHhhccCCeEEEEEEecCCCchhhhH--hhhhcCceEeeccc-----ccCHHHHH
Q 028497 79 SVIERTKCYNCLVWA--KSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNL--LRIRKAGVVGVYHP-----LIDEKLVR 149 (208)
Q Consensus 79 ~~l~~~~~~~~ii~S--f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~v~ 149 (208)
+.....|..-+++.. .+.+.++.+.+...++-+-.+...+ + ..++ +...|++++++... ..+.+...
T Consensus 129 ~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~--t--~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~ 204 (272)
T 3qja_A 129 HEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVH--T--EQEADRALKAGAKVIGVNARDLMTLDVDRDCFA 204 (272)
T ss_dssp HHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEES--S--HHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHH
T ss_pred HHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcC--C--HHHHHHHHHCCCCEEEECCCcccccccCHHHHH
Confidence 344567875555542 3555555555443322222233322 1 1222 23478898876532 12334444
Q ss_pred HHHhC---CCeEE-EeeCCCHHHHHHHHhCCCCEEEc-------CChHHHHHHHH
Q 028497 150 TFHGR---NKRVF-AWTVDDEDSMRKMLHERVDAVVT-------SNPILFQRVMQ 193 (208)
Q Consensus 150 ~~~~~---g~~v~-~wtv~~~~~~~~~~~~gvd~i~T-------D~P~~~~~~~~ 193 (208)
.+.+. ++++. .-++++++++..+.+.|++|++. ++|..+.+.+.
T Consensus 205 ~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 205 RIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp HHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred HHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 44432 66654 45788999999999999999986 67777665544
No 184
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=49.01 E-value=31 Score=28.57 Aligned_cols=41 Identities=17% Similarity=0.258 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCCeEEEeeC-C----------C--------HHHHHHHHhCCCCEEEcCCh
Q 028497 145 EKLVRTFHGRNKRVFAWTV-D----------D--------EDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv-~----------~--------~~~~~~~~~~gvd~i~TD~P 185 (208)
..+++.+|++|++|.+-.| | . .+.++..++.||||+=-|..
T Consensus 85 ~~lv~~ah~~Gi~vilD~V~NH~s~~~wF~~q~~~Vr~~~~~~~~~Wl~~gvDGfRlD~v 144 (424)
T 2dh2_A 85 DSLLQSAKKKSIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQVRDI 144 (424)
T ss_dssp HHHHHHHHHTTCEEEEECCTTTTSSSTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred HHHHHHHHHCCCEEEEEECCCcCCCcccccccCHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 4678999999999988654 2 1 12455566889999998843
No 185
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=48.69 E-value=93 Score=24.18 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=59.6
Q ss_pred HHhcCCcceEEEe--eCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHh--hhhcCceEeecccc-----cCHHHHHH-
Q 028497 81 IERTKCYNCLVWA--KSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLL--RIRKAGVVGVYHPL-----IDEKLVRT- 150 (208)
Q Consensus 81 l~~~~~~~~ii~S--f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~v~~- 150 (208)
.+.+|..-.++.. .+.+.++.+.+..-+.-...+...+. ..++. ...|++++++.... .+.+....
T Consensus 138 a~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~----~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L 213 (272)
T 3tsm_A 138 ARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHD----EAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERL 213 (272)
T ss_dssp HHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECS----HHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHH
T ss_pred HHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCC----HHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHH
Confidence 4567876555543 35556666655433333333444321 12332 23788888765321 22222222
Q ss_pred HHh--CCCeE-EEeeCCCHHHHHHHHhCCCCEEEc-------CChHHHHH
Q 028497 151 FHG--RNKRV-FAWTVDDEDSMRKMLHERVDAVVT-------SNPILFQR 190 (208)
Q Consensus 151 ~~~--~g~~v-~~wtv~~~~~~~~~~~~gvd~i~T-------D~P~~~~~ 190 (208)
+.. .++.+ .--++.++++++++.+.|+++|.. ++|....+
T Consensus 214 ~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~~~~~~ 263 (272)
T 3tsm_A 214 AKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATR 263 (272)
T ss_dssp HHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCHHHHHH
T ss_pred HHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCHHHHHH
Confidence 222 25554 445789999999999999999985 45655544
No 186
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=48.68 E-value=43 Score=26.12 Aligned_cols=37 Identities=5% Similarity=0.039 Sum_probs=25.4
Q ss_pred HHHHHHHhC-CCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGR-NKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~-g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+.++.+.+. +.++.+|.. +...++++++.|++.|..+
T Consensus 62 e~~~~i~~~~~~~v~~l~~-n~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 62 EVMAGIRRADGVRYSVLVP-NMKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp HHHHHSCCCSSSEEEEECS-SHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHCCCCEEEEE
Confidence 344444444 777777774 4678888888888887776
No 187
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=47.43 E-value=20 Score=28.72 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=30.2
Q ss_pred HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 145 EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 145 ~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.+.++.+++. +..+..=++.+.++++.+.+.|+|+|+.
T Consensus 137 ~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 137 INMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 4567877776 5666554488999999999999999876
No 188
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=47.18 E-value=87 Score=23.42 Aligned_cols=140 Identities=9% Similarity=0.069 Sum_probs=79.6
Q ss_pred HHHHHHHHhcC-CceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEE-EeeCHHHHHHHHhhc-cCCeEEEEEEecCC
Q 028497 44 IEDALTLVSNS-VRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLV-WAKSDNLVRDIMRLS-SNVTAGYIIMVDPS 120 (208)
Q Consensus 44 L~evL~~~~~~-~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii-~Sf~~~~l~~l~~~~-p~~~~~~l~~~~~~ 120 (208)
+.|++..+.+. +-.+.+|+-..+ . ..+++.-.++. +.+ ++.+| .-..++-++.++.+. -++++-...-+.+.
T Consensus 40 ~~~~~~eI~~~v~G~Vs~EV~a~d--~-e~mi~ea~~l~-~~~-~nv~IKIP~T~eGl~A~~~L~~~GI~vn~TlifS~~ 114 (212)
T 3r8r_A 40 FHDRLREITDVVKGSVSAEVISLK--A-EEMIEEGKELA-KIA-PNITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNAN 114 (212)
T ss_dssp HHHHHHHHHHHCCSCEEEECCCSS--H-HHHHHHHHHHH-TTC-TTEEEEEESSHHHHHHHHHHHHTTCCEEEEEECSHH
T ss_pred HHHHHHHHHHhcCCCEEEEEecCC--H-HHHHHHHHHHH-HhC-CCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEeCCHH
Confidence 44555444321 126888985432 1 24444433332 222 45666 566777667666653 35777554433221
Q ss_pred CchhhhHhhhhcCceEeecccc-----cC-----HHHHHHHHhCCCe--EEEeeCCCHHHHHHHHhCCCCEEEcCChHHH
Q 028497 121 TGFRTNLLRIRKAGVVGVYHPL-----ID-----EKLVRTFHGRNKR--VFAWTVDDEDSMRKMLHERVDAVVTSNPILF 188 (208)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~v~~~~~~g~~--v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~ 188 (208)
+ .-++...|+++++++..- .+ .++.+.++++|.+ +..=.+.+..++..+...|+|.+ |=-|..+
T Consensus 115 Q---a~~Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS~R~~~~v~~~a~~G~d~~-Tip~~vl 190 (212)
T 3r8r_A 115 Q---ALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIG-TMPLKVI 190 (212)
T ss_dssp H---HHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEEBSCCSHHHHHHHHHTTCSEE-EECHHHH
T ss_pred H---HHHHHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEEecCCCHHHHHHHHHcCCCEE-EcCHHHH
Confidence 1 122334789988875431 11 3445556666754 44557899999999999999966 5556666
Q ss_pred HHHH
Q 028497 189 QRVM 192 (208)
Q Consensus 189 ~~~~ 192 (208)
.+++
T Consensus 191 ~~l~ 194 (212)
T 3r8r_A 191 HALT 194 (212)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5554
No 189
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=47.03 E-value=57 Score=21.95 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=24.2
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
+++.++.+++.|..+..--..+++.++.+--.++|.++.
T Consensus 39 ~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 39 SRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 466677777788876555555666555543345777663
No 190
>2yxx_A Diaminopimelate decarboxylase; TM1517, TIM beta/alpha barrel fold, lyase, structural genomi NPPSFA; HET: PLP; 1.70A {Thermotoga maritima}
Probab=46.81 E-value=1.1e+02 Score=24.57 Aligned_cols=50 Identities=14% Similarity=-0.001 Sum_probs=33.5
Q ss_pred cCHHHHHHHHhCCC--e-EEEeeC-CCHHHHHHHHhCCCCEEEcCChHHHHHHH
Q 028497 143 IDEKLVRTFHGRNK--R-VFAWTV-DDEDSMRKMLHERVDAVVTSNPILFQRVM 192 (208)
Q Consensus 143 ~~~~~v~~~~~~g~--~-v~~wtv-~~~~~~~~~~~~gvd~i~TD~P~~~~~~~ 192 (208)
.+..=...+++.|+ + +.+... .++++++.+++.|+..+..|.++++..+-
T Consensus 67 as~~E~~~~~~~G~~~~~Il~~~~~k~~~~l~~a~~~~v~~~~vds~~el~~l~ 120 (386)
T 2yxx_A 67 VTKGELLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWR 120 (386)
T ss_dssp CSHHHHHHHHHTTCCGGGEEECCSCCCHHHHHHHHHTTCCEEEECCHHHHHHHH
T ss_pred cCHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHH
Confidence 34444456667777 4 666554 36778888888887677777777777554
No 191
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=46.80 E-value=31 Score=28.08 Aligned_cols=60 Identities=15% Similarity=0.251 Sum_probs=46.4
Q ss_pred HHHHHHHhC--CCeEEEe-eCCCHHHHHHHHhCCCCEEEcC------ChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR--NKRVFAW-TVDDEDSMRKMLHERVDAVVTS------NPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD------~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+.+..++++ .++|..- .+.+.+++.+++..|+|+|..= -|..+.++.++++.-+.++|+.
T Consensus 266 ~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l~~~m~~~G~~ 334 (354)
T 4ef8_A 266 ANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRYQ 334 (354)
T ss_dssp HHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHHHHHHHHHHHHcCCC
Confidence 456677765 4777654 6889999999999999999854 3888888888888888888863
No 192
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=46.71 E-value=55 Score=24.82 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCeEEEeeCCCHH----HHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGRNKRVFAWTVDDED----SMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~----~~~~~~~~gvd~i~TD 183 (208)
.+-+.++++|+.+.+...++.+ .++.++..|+|||+..
T Consensus 23 gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~ 64 (306)
T 8abp_A 23 FADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVIC 64 (306)
T ss_dssp HHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3445566677777665555432 3555666777777654
No 193
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=46.65 E-value=92 Score=23.54 Aligned_cols=91 Identities=13% Similarity=0.142 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHhcCCcceEEEee-----CHHHHHHHHhhccCCeEEEEEEecCCCc--hh----hhH-------hhhhcC
Q 028497 72 GLAKDILSVIERTKCYNCLVWAK-----SDNLVRDIMRLSSNVTAGYIIMVDPSTG--FR----TNL-------LRIRKA 133 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf-----~~~~l~~l~~~~p~~~~~~l~~~~~~~~--~~----~~~-------~~~~~~ 133 (208)
.....++++++++++.-..|... +++.++++.+. +..+|-=...++... .. .++ .+..|.
T Consensus 68 ~~t~~il~iL~~~~v~ATfFv~g~~~~~~p~~~~~~~~~--GheIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~ 145 (247)
T 2j13_A 68 GYTGKILDVLKEKKVPATFFVTGHYIKTQKDLLLRMKDE--GHIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKKVTGQ 145 (247)
T ss_dssp SCHHHHHHHHHHHTCCEEEEECHHHHHHCHHHHHHHHHT--TCEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHHHcCCCEEEEEeChhhhhCHHHHHHHHHC--CCEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHHHhCC
Confidence 34567899999999865554432 45667777652 344542111222110 11 111 122443
Q ss_pred ---ceEeecccccCHHHHHHHHhCCCeEEEeeCC
Q 028497 134 ---GVVGVYHPLIDEKLVRTFHGRNKRVFAWTVD 164 (208)
Q Consensus 134 ---~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~ 164 (208)
.++.+.+...++..++.+++.|+.+..|+++
T Consensus 146 ~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~wsvd 179 (247)
T 2j13_A 146 KEVKYVRPPRGVFSERTLALTKEMGYYNVFWSLA 179 (247)
T ss_dssp SCCCEECCGGGEECHHHHHHHHHTTCEEECCSEE
T ss_pred CCCcEEeCCCCCCCHHHHHHHHHCCCEEEecCcc
Confidence 3555566677889999999999999999874
No 194
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=46.37 E-value=83 Score=24.76 Aligned_cols=86 Identities=10% Similarity=0.056 Sum_probs=51.9
Q ss_pred HHHHHHhhccCCeEEEEEEecCCCchhhhH---hhhhcCceEeeccc--------ccCHHHHHHHHhCCCeEEEee-CCC
Q 028497 98 LVRDIMRLSSNVTAGYIIMVDPSTGFRTNL---LRIRKAGVVGVYHP--------LIDEKLVRTFHGRNKRVFAWT-VDD 165 (208)
Q Consensus 98 ~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~~v~~~~~~g~~v~~wt-v~~ 165 (208)
.++.+++..+ +++++-+..........++ ....|++++.++.. ..+.+.+..+++ +++|.+-+ +.+
T Consensus 117 iv~~v~~~~~-~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~-~ipVi~~GgI~s 194 (318)
T 1vhn_A 117 IVRELRKSVS-GKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-RIPTFVSGDIFT 194 (318)
T ss_dssp HHHHHHHHCS-SEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC-SSCEEEESSCCS
T ss_pred HHHHHHHhhC-CCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc-CCeEEEECCcCC
Confidence 4566666543 6666554321111100122 23478888766421 122345666666 88887764 689
Q ss_pred HHHHHHHHh-CCCCEEEcCCh
Q 028497 166 EDSMRKMLH-ERVDAVVTSNP 185 (208)
Q Consensus 166 ~~~~~~~~~-~gvd~i~TD~P 185 (208)
.+++.++++ .|+|+|+.-++
T Consensus 195 ~~da~~~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 195 PEDAKRALEESGCDGLLVARG 215 (318)
T ss_dssp HHHHHHHHHHHCCSEEEESGG
T ss_pred HHHHHHHHHcCCCCEEEECHH
Confidence 999999998 79999988754
No 195
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=46.28 E-value=42 Score=24.73 Aligned_cols=49 Identities=6% Similarity=0.078 Sum_probs=36.7
Q ss_pred HHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEc---CChHHHHHHHHHH
Q 028497 147 LVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVT---SNPILFQRVMQDI 195 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~T---D~P~~~~~~~~~~ 195 (208)
+++.++++|+++.+-|-+....++..+ .+|++.++. +.|..+..+++++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~k~K~~~l~~~~~~l 136 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQSDKLVAYHELLATL 136 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcccCChHHHHHHHHHHc
Confidence 789999999999999987766655554 578887765 4666666666654
No 196
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=45.98 E-value=1.2e+02 Score=24.76 Aligned_cols=111 Identities=5% Similarity=0.044 Sum_probs=66.3
Q ss_pred HHHHHHHhcCCcceEEEeeC--HHHHHHHHhhcc-CCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHH
Q 028497 76 DILSVIERTKCYNCLVWAKS--DNLVRDIMRLSS-NVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFH 152 (208)
Q Consensus 76 ~v~~~l~~~~~~~~ii~Sf~--~~~l~~l~~~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 152 (208)
.+.++.++++. ...+++-+ .+.++.+++..| ++++.+....++.... .......|. . ....+..=++.++
T Consensus 7 ~~~~l~~~~~t-P~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan~~~~v-~~~l~~~G~-g----~~vas~~E~~~~~ 79 (428)
T 2j66_A 7 EITALTKRFET-PFYLYDGDFIEAHYRQLRSRTNPAIQFYLSLKANNNIHL-AKLFRQWGL-G----VEVASAGELALAR 79 (428)
T ss_dssp HHHHHHHHSCS-SEEEEEHHHHHHHHHHHHHTSCTTEEEEEEGGGCCCHHH-HHHHHHTTC-E----EEESSHHHHHHHH
T ss_pred cHHHHHHhhCC-CEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeeeCCCHHH-HHHHHHcCC-e----EEEeCHHHHHHHH
Confidence 45567778774 34444433 245677777666 5555544433331111 111122342 1 2234455567788
Q ss_pred hCCC---eEEEeeC-CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 153 GRNK---RVFAWTV-DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 153 ~~g~---~v~~wtv-~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
+.|+ ++.+... .+.++++.+++.|+..+.-|.+..+.++-+
T Consensus 80 ~~G~~~~~I~~~g~~k~~~~i~~a~~~~v~~~~vds~~el~~l~~ 124 (428)
T 2j66_A 80 HAGFSAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEE 124 (428)
T ss_dssp HTTCCGGGEEECCSCCCHHHHHHHHHHTCSEEEECSHHHHHHHHH
T ss_pred HcCCCcCeEEEeCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH
Confidence 8897 3666655 467899999999998899999999776544
No 197
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=45.95 E-value=1.1e+02 Score=24.03 Aligned_cols=81 Identities=9% Similarity=0.025 Sum_probs=50.9
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHH----HHHHHhC--CCeEEEeeCCCHHHHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKL----VRTFHGR--NKRVFAWTVDDEDSMR 170 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~--g~~v~~wtv~~~~~~~ 170 (208)
++++.+++..|..++...... . .-. .+..+ .|++++-... ++++. ++.++.. +.++.+=+-=+++.++
T Consensus 183 ~av~~ar~~~~~~~I~Vev~t-~-eea-~eal~-aGaD~I~LDn--~~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~ 256 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEVEVDS-L-EQL-DAVLP-EKPELILLDN--FAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAA 256 (284)
T ss_dssp HHHHHHHHHCTTSCEEEEESS-H-HHH-HHHGG-GCCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHH
T ss_pred HHHHHHHHhCCCCCEEEEeCC-H-HHH-HHHHH-cCCCEEEECC--CCHHHHHHHHHHhhccCCCeEEEEECCCCHHHHH
Confidence 467888888886677655532 1 101 12222 6788765544 34443 4444442 5777777666788999
Q ss_pred HHHhCCCCEEEcC
Q 028497 171 KMLHERVDAVVTS 183 (208)
Q Consensus 171 ~~~~~gvd~i~TD 183 (208)
.+.+.|||+|.+-
T Consensus 257 ~~a~tGVD~isvG 269 (284)
T 1qpo_A 257 TYAETGVDYLAVG 269 (284)
T ss_dssp HHHHTTCSEEECG
T ss_pred HHHhcCCCEEEEC
Confidence 9999999999764
No 198
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=45.88 E-value=45 Score=26.76 Aligned_cols=49 Identities=8% Similarity=0.103 Sum_probs=34.5
Q ss_pred HHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
..++.+++. ..++-+ -+++.++++.+++.|+|+|.-| .|+.++++++..
T Consensus 220 ~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn~~~~~l~~av~~l 272 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDNFSLEMMREAVKIN 272 (320)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 345555543 244444 6788899999999999999999 566777766544
No 199
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=45.85 E-value=42 Score=25.94 Aligned_cols=48 Identities=13% Similarity=0.132 Sum_probs=35.7
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCCh-HHHHHHHHH
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNP-ILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P-~~~~~~~~~ 194 (208)
..+..++.+|+++.+++ .+++..+.++.+|.+.+...-- ..+.+..+.
T Consensus 201 ~iv~aa~aaG~~~~v~~-~d~~~a~~~~~~G~~~~s~~~d~~~l~~~~~~ 249 (267)
T 2vws_A 201 TSIRRIRAAGKAAGFLA-VAPDMAQQCLAWGANFVAVGVDTMLYSDALDQ 249 (267)
T ss_dssp HHHHHHHHTTCEEEEEC-SSHHHHHHHHHTTCCEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEec-CCHHHHHHHHHCCCCEEEEchHHHHHHHHHHH
Confidence 35677899999998865 5888999999999999887643 333444443
No 200
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=45.73 E-value=43 Score=26.28 Aligned_cols=38 Identities=11% Similarity=0.010 Sum_probs=31.7
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
..+..++.+|+++.++. .+++..+.++.+|++.+...-
T Consensus 222 ~iv~aaraaG~~~gv~~-~d~~~a~~~~~~G~~~~s~~~ 259 (287)
T 2v5j_A 222 QAIVQIRESGKAPGILI-ANEQLAKRYLELGALFVAVGV 259 (287)
T ss_dssp HHHHHHHHTTSEEEEEC-CCHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCeeEEec-CCHHHHHHHHHhCCCEEEECc
Confidence 45677899999998865 578899999999999987764
No 201
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=45.63 E-value=52 Score=25.01 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=34.1
Q ss_pred hcCceEeecccccC-HHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 131 RKAGVVGVYHPLID-EKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 131 ~~~~~~~~~~~~~~-~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.|...+.+-.+... .+.++.+++. ++.+..=||-+.++++.+++.|+++|.+-
T Consensus 58 gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 58 NGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSP 113 (232)
T ss_dssp TTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeC
Confidence 45565544322221 3456655542 56666777878888888888888888875
No 202
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=45.61 E-value=63 Score=24.18 Aligned_cols=34 Identities=9% Similarity=0.123 Sum_probs=14.5
Q ss_pred HHHHhCCCeEEEeeCCC-H----HHHHHHHhCCCCEEEc
Q 028497 149 RTFHGRNKRVFAWTVDD-E----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 149 ~~~~~~g~~v~~wtv~~-~----~~~~~~~~~gvd~i~T 182 (208)
+.+.++|+.+.+...+. . ..++.+...++|||+.
T Consensus 31 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi 69 (276)
T 3jy6_A 31 SILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLIL 69 (276)
T ss_dssp HHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEE
T ss_pred HHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 34445555554443321 1 1233344445555554
No 203
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=45.25 E-value=36 Score=27.84 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=33.4
Q ss_pred ccCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 142 LIDEKLVRTFHG-RNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 142 ~~~~~~v~~~~~-~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
..+.+.++.+++ .+++|.+=++.+.++++.+.+.|+|+|+.
T Consensus 211 ~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~v 252 (380)
T 1p4c_A 211 SFNWEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVIL 252 (380)
T ss_dssp TCCHHHHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEE
T ss_pred cccHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEE
Confidence 345677887665 58888876788999999999999999876
No 204
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=45.14 E-value=73 Score=23.74 Aligned_cols=50 Identities=16% Similarity=0.226 Sum_probs=36.5
Q ss_pred HHHHHHH-hCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHHHHHH
Q 028497 146 KLVRTFH-GRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~-~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~~~~~ 195 (208)
+.++.++ ..++++.+= .++++++++.+++.|+|+|... +|..+.++++.+
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~ 121 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEH 121 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHc
Confidence 5555554 457887664 5788889999999999998865 566677766654
No 205
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=45.02 E-value=59 Score=23.28 Aligned_cols=49 Identities=6% Similarity=0.042 Sum_probs=37.2
Q ss_pred HHHHHHhCCCeEEEeeCCCHHHHHHH-HhCCCCEEEcC---ChHHHHHHHHHH
Q 028497 147 LVRTFHGRNKRVFAWTVDDEDSMRKM-LHERVDAVVTS---NPILFQRVMQDI 195 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~~~~~~~~-~~~gvd~i~TD---~P~~~~~~~~~~ 195 (208)
.++.++++|+++.+-|-++...++.. ..+|++.++.. .|..+..+++.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~ 106 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQVDKRSAYQHLKKTL 106 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCCCChHHHHHHHHHHh
Confidence 48899999999999997776555554 46788887765 577777777755
No 206
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=44.69 E-value=84 Score=23.79 Aligned_cols=59 Identities=8% Similarity=0.125 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCeEEEeeC-CCHH----HHHHHHhC-----CCCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 146 KLVRTFHGRNKRVFAWTV-DDED----SMRKMLHE-----RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv-~~~~----~~~~~~~~-----gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
.+.+.++++|+.+.++.. .+.+ .++.+++. .+++|++.+-..+..+++..+ +.|..+|+
T Consensus 152 Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ai~~~~d~~A~g~~~al~----~~g~~vP~ 220 (295)
T 3hcw_A 152 GFETVASQFNLDYQIIETSNEREVILNYMQNLHTRLKDPNIKQAIISLDAMLHLAILSVLY----ELNIEIPK 220 (295)
T ss_dssp HHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHHTCTTSCEEEEESSHHHHHHHHHHHH----HTTCCTTT
T ss_pred HHHHHHHHcCCCeeEEeccCCHHHHHHHHHHHHhhcccCCCCcEEEECChHHHHHHHHHHH----HcCCCCCC
Confidence 456778899998764432 2332 34555543 689999998888777777655 66766663
No 207
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=44.66 E-value=1.1e+02 Score=23.89 Aligned_cols=54 Identities=11% Similarity=0.156 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCCeEEEe-----eC-----CCHHHH----HHHHhCCCCEEE-cC-----ChHHHHHHHHHHHhh
Q 028497 145 EKLVRTFHGRNKRVFAW-----TV-----DDEDSM----RKMLHERVDAVV-TS-----NPILFQRVMQDIRTQ 198 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~w-----tv-----~~~~~~----~~~~~~gvd~i~-TD-----~P~~~~~~~~~~~~~ 198 (208)
.+.++++|++|+.|-.. .. .+++.+ +.+.+.|+|.|. .| .|....++++..+..
T Consensus 127 ~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 127 VPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHh
Confidence 56789999999998532 21 244443 444579999873 22 799999999887653
No 208
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=44.64 E-value=43 Score=25.63 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=32.1
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
.++..++.+|+++.++. .+++....++++|++.+...-.
T Consensus 201 ~iv~aa~a~G~~~~v~~-~d~~~~~~~~~~G~~~~s~~~d 239 (256)
T 1dxe_A 201 HIFNRASAHGKPSGILA-PVEADARRYLEWGATFVAVGSD 239 (256)
T ss_dssp HHHHHHHHTTCCEEEEC-CSHHHHHHHHHTTCCEEEEEEH
T ss_pred HHHHHHHHhCCceEEec-CCHHHHHHHHHcCCCEEEechH
Confidence 45677899999998865 4788999999999999877643
No 209
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=44.43 E-value=51 Score=27.58 Aligned_cols=58 Identities=19% Similarity=0.331 Sum_probs=38.0
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHH--HHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPIL--FQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~--~~~~~~~~~~~~~~~~~ 204 (208)
++-+.++++|.++.+-..+..+.+.++.+ |++.|.+|.-.. ..+.-+..+..|.+.|.
T Consensus 60 ~L~~~L~~~G~~L~v~~g~~~~~l~~l~~-~~~~v~~~~~~~~~~~~rd~~v~~~l~~~gi 119 (440)
T 2e0i_A 60 ELDDELRKKGSRLNVFFGEAEKVVSRFFN-KVDAIYVNEDYTPFSISRDEKIRKVCEENGI 119 (440)
T ss_dssp HHHHHHHTTTCCCEEEESCHHHHHHHHCT-TCSEEEEECCCSHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCeEEEEECCHHHHHHHHHc-CCCEEEEecccChHHHHHHHHHHHHHHHcCc
Confidence 44556788899888877766777888888 999999863211 12222344666666554
No 210
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=44.17 E-value=74 Score=25.19 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=30.0
Q ss_pred HHHHHHHhC---CCeEEEe-eCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 146 KLVRTFHGR---NKRVFAW-TVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
+.++.++++ +++|..- .+.+.+++.+++..|+|+|..=.+
T Consensus 277 ~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~ 320 (336)
T 1f76_A 277 EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSG 320 (336)
T ss_dssp HHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHH
Confidence 445555543 7888654 689999999999999999976544
No 211
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=43.86 E-value=19 Score=27.73 Aligned_cols=56 Identities=20% Similarity=-0.003 Sum_probs=37.6
Q ss_pred hhcCceE--eecccccC--------HHHHHHHHhCCCeEEEeeC---------CCH---HHH-HHHHhCCCCEEEcCCh
Q 028497 130 IRKAGVV--GVYHPLID--------EKLVRTFHGRNKRVFAWTV---------DDE---DSM-RKMLHERVDAVVTSNP 185 (208)
Q Consensus 130 ~~~~~~~--~~~~~~~~--------~~~v~~~~~~g~~v~~wtv---------~~~---~~~-~~~~~~gvd~i~TD~P 185 (208)
..|++.+ .+.....+ ..+++.+++.|+++.+++. .+. .++ +.+.+.|+|.|.+.+|
T Consensus 110 ~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~ 188 (273)
T 2qjg_A 110 RMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSYT 188 (273)
T ss_dssp HTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCC
Confidence 3788887 43333322 2456778889999988761 122 333 6778999999999975
No 212
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=43.69 E-value=24 Score=28.02 Aligned_cols=50 Identities=10% Similarity=0.204 Sum_probs=36.2
Q ss_pred HHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDIR 196 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~~ 196 (208)
..++.+++. .+++-+ -+++.++.+.+++.|+|.|+-| .|+.++++++...
T Consensus 196 ~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~s~~~l~~av~~~~ 249 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNMSISEIKKAVDIVN 249 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHhhc
Confidence 445555543 344444 5678899999999999999999 5677777776553
No 213
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=43.47 E-value=53 Score=26.71 Aligned_cols=43 Identities=14% Similarity=0.221 Sum_probs=35.0
Q ss_pred ccCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 142 LIDEKLVRTFHG-RNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 142 ~~~~~~v~~~~~-~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
..+.+.++.+++ -+++|.+=.+.+.++++.+.+.|+|+|+...
T Consensus 215 ~~~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 215 KISPRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp BCCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred hhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcC
Confidence 345666888776 5889888778899999999999999998743
No 214
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=43.13 E-value=27 Score=28.97 Aligned_cols=40 Identities=10% Similarity=0.075 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCCeEEEeeC--------------CCHHHHHHHHhCCCCEEEcCC
Q 028497 145 EKLVRTFHGRNKRVFAWTV--------------DDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv--------------~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.+++++|+.|+++.+|+- ..+.+++.+.+.|||+|=.|.
T Consensus 87 ~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa~WGvDylK~D~ 140 (404)
T 3hg3_A 87 RQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFAG 140 (404)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHHHhCCcEEEecC
Confidence 5789999999999999952 124678888999999999884
No 215
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=43.02 E-value=37 Score=25.55 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=31.5
Q ss_pred CHHHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 144 DEKLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 144 ~~~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
+.++++.+++ .++++.+- ++.+.+++.++.+.|+++++.=
T Consensus 184 ~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 184 DLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAA 225 (252)
T ss_dssp CHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHH
Confidence 4667777654 57888764 6888999999999999998853
No 216
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=42.98 E-value=67 Score=25.22 Aligned_cols=81 Identities=14% Similarity=0.040 Sum_probs=49.6
Q ss_pred HHHHHHHhhccC-CeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHH----HHhC--CCeEEEeeCCCHHHH
Q 028497 97 NLVRDIMRLSSN-VTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRT----FHGR--NKRVFAWTVDDEDSM 169 (208)
Q Consensus 97 ~~l~~l~~~~p~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~----~~~~--g~~v~~wtv~~~~~~ 169 (208)
..++.+|+..|. .+++.-... . .-. .+. -..|++++.... ++++.++. ++.. ++++.+=+-=+.+.+
T Consensus 181 ~av~~ar~~~~~~~~I~VEV~t-l-eea-~eA-~~aGaD~I~LDn--~~~e~l~~av~~l~~~~~~v~ieASGGIt~eni 254 (285)
T 1o4u_A 181 RAVQEVRKIIPFTTKIEVEVEN-L-EDA-LRA-VEAGADIVMLDN--LSPEEVKDISRRIKDINPNVIVEVSGGITEENV 254 (285)
T ss_dssp HHHHHHHTTSCTTSCEEEEESS-H-HHH-HHH-HHTTCSEEEEES--CCHHHHHHHHHHHHHHCTTSEEEEEECCCTTTG
T ss_pred HHHHHHHHhCCCCceEEEEeCC-H-HHH-HHH-HHcCCCEEEECC--CCHHHHHHHHHHhhccCCCceEEEECCCCHHHH
Confidence 357788887776 677765431 1 101 112 226888765544 45554443 3321 577777765577888
Q ss_pred HHHHhCCCCEEEcC
Q 028497 170 RKMLHERVDAVVTS 183 (208)
Q Consensus 170 ~~~~~~gvd~i~TD 183 (208)
..+.+.|||+|.+-
T Consensus 255 ~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 255 SLYDFETVDVISSS 268 (285)
T ss_dssp GGGCCTTCCEEEEG
T ss_pred HHHHHcCCCEEEEe
Confidence 99999999998753
No 217
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=42.90 E-value=46 Score=25.17 Aligned_cols=38 Identities=26% Similarity=0.241 Sum_probs=29.4
Q ss_pred HHHHHHHhCCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGRNKRVFAWTVD-DEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD 183 (208)
++++.+++.+.++.+-|.. +.+...++++.|++++++=
T Consensus 65 ~~~~~lr~~~~pvi~lt~~~~~~~~~~a~~~Ga~dyl~K 103 (259)
T 3luf_A 65 EAVKVLLERGLPVVILTADISEDKREAWLEAGVLDYVMK 103 (259)
T ss_dssp HHHHHHHHTTCCEEEEECC-CHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHhCCCCEEEEEccCCHHHHHHHHHCCCcEEEeC
Confidence 5667777778898888864 5677788889999888775
No 218
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=42.84 E-value=94 Score=22.55 Aligned_cols=51 Identities=10% Similarity=0.203 Sum_probs=35.4
Q ss_pred hhcCceEeeccc-ccCHHHHHHHHhC---CCeEEEee-CCCHHHHHHHHhCCCCEEE
Q 028497 130 IRKAGVVGVYHP-LIDEKLVRTFHGR---NKRVFAWT-VDDEDSMRKMLHERVDAVV 181 (208)
Q Consensus 130 ~~~~~~~~~~~~-~~~~~~v~~~~~~---g~~v~~wt-v~~~~~~~~~~~~gvd~i~ 181 (208)
..|++++.++.. ....+.++.+.+. ++++.+=+ ++ .+.+..+++.|+++|.
T Consensus 119 ~~G~d~v~v~~t~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~ 174 (212)
T 2v82_A 119 EAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAG 174 (212)
T ss_dssp HTTCSEEEETTHHHHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEE
T ss_pred HCCCCEEEEecCCCCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEE
Confidence 378888765321 2345667776653 37877654 55 7889999999999987
No 219
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=42.70 E-value=1.4e+02 Score=24.54 Aligned_cols=113 Identities=11% Similarity=0.077 Sum_probs=71.3
Q ss_pred hHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhh---cCceEee--cccccCHH
Q 028497 72 GLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIR---KAGVVGV--YHPLIDEK 146 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~ 146 (208)
.+-..+.+.+.+.|. +++++-.+++.++.+++. ++++ .+ .++.. .+..+.. +++.+.+ .....+..
T Consensus 14 r~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~--g~~v--i~-GDat~---~~~L~~agi~~A~~viv~~~~~~~n~~ 84 (413)
T 3l9w_A 14 RFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF--GMKV--FY-GDATR---MDLLESAGAAKAEVLINAIDDPQTNLQ 84 (413)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT--TCCC--EE-SCTTC---HHHHHHTTTTTCSEEEECCSSHHHHHH
T ss_pred HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC--CCeE--EE-cCCCC---HHHHHhcCCCccCEEEECCCChHHHHH
Confidence 566778888888774 677888999988888763 3333 22 23322 2333323 3454433 22233445
Q ss_pred HHHHHHhCCCeEEEee-CCCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 147 LVRTFHGRNKRVFAWT-VDDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wt-v~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
.+..+++.+-.+.+.. +++......+.++|+|.|+.-.-....++.+
T Consensus 85 i~~~ar~~~p~~~Iiara~~~~~~~~L~~~Gad~Vi~~~~~~a~~la~ 132 (413)
T 3l9w_A 85 LTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGR 132 (413)
T ss_dssp HHHHHHHHCTTCEEEEEESSHHHHHHHHHTTCSSCEETTHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEECCHHHHHHHHHCCCCEEECccHHHHHHHHH
Confidence 6777888776544443 4678889999999999999776665555443
No 220
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=42.61 E-value=15 Score=28.64 Aligned_cols=34 Identities=9% Similarity=0.056 Sum_probs=29.1
Q ss_pred HHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 149 RTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 149 ~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
+.+.+.|+.|..|+.+|....+++.++|++.|+-
T Consensus 118 ~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmP 151 (268)
T 2htm_A 118 ERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMP 151 (268)
T ss_dssp HHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEE
T ss_pred HHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEe
Confidence 3345669999999999999999999999999875
No 221
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=42.59 E-value=1.4e+02 Score=24.52 Aligned_cols=100 Identities=9% Similarity=0.061 Sum_probs=58.6
Q ss_pred HHHHHHHhcCCcceEEEeeC------HHHHHHHHhh---cc--CCeEEEEEEecCCCc-------hhhhHhhhhcCceEe
Q 028497 76 DILSVIERTKCYNCLVWAKS------DNLVRDIMRL---SS--NVTAGYIIMVDPSTG-------FRTNLLRIRKAGVVG 137 (208)
Q Consensus 76 ~v~~~l~~~~~~~~ii~Sf~------~~~l~~l~~~---~p--~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~ 137 (208)
..++...++|+ .++|.|.. ....++++++ +. ++.+. ....|... ..-.+.+..|++.+-
T Consensus 45 ~Yi~~a~~~Gf-~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi--~DVsp~~~~~Lg~s~~dl~~f~~lGi~gLR 121 (385)
T 1x7f_A 45 AYISAAARHGF-SRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVI--LDVAPAVFDQLGISYSDLSFFAELGADGIR 121 (385)
T ss_dssp HHHHHHHTTTE-EEEEEEECCC--------HHHHHHHHHHHHTTCEEE--EEECTTCC------CCCTHHHHHHTCSEEE
T ss_pred HHHHHHHHCCC-CEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEE--EECCHHHHHHcCCCHHHHHHHHHcCCCEEE
Confidence 45566677775 66777761 1234444443 22 34443 33334221 011334668999888
Q ss_pred ecccccCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHhCCCC
Q 028497 138 VYHPLIDEKLVRTFHG-RNKRVFAWTVDDEDSMRKMLHERVD 178 (208)
Q Consensus 138 ~~~~~~~~~~v~~~~~-~g~~v~~wtv~~~~~~~~~~~~gvd 178 (208)
+.+.+-..+....-++ .|+++.+-..++++.+..+++.|++
T Consensus 122 LD~Gf~~~eia~ls~n~~glkIeLNASt~~~~l~~l~~~~~n 163 (385)
T 1x7f_A 122 LDVGFDGLTEAKMTNNPYGLKIELNVSNDIAYLENILSHQAN 163 (385)
T ss_dssp ESSCCSSHHHHHHTTCTTCCEEEEETTSCSSHHHHHTTSSCC
T ss_pred EcCCCCHHHHHHHhcCCCCCEEEEeCcCCHHHHHHHHHcCCC
Confidence 8888765555444343 4788887766688889999998887
No 222
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=42.42 E-value=45 Score=25.68 Aligned_cols=39 Identities=3% Similarity=0.215 Sum_probs=31.2
Q ss_pred HHHHHHHHhC-CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC
Q 028497 145 EKLVRTFHGR-NKRVFA-WTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 145 ~~~v~~~~~~-g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.++++.+++. ++++.+ .++++++.+.+++..|+|+++.-
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4678888765 577765 46788999999999999999864
No 223
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=42.40 E-value=1.3e+02 Score=24.08 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=38.7
Q ss_pred hhcCceEeecccc---------------cCHHHHHHHHhC--CCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 130 IRKAGVVGVYHPL---------------IDEKLVRTFHGR--NKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 130 ~~~~~~~~~~~~~---------------~~~~~v~~~~~~--g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
..|++++.++... .+.+++..+++. +++|.+- .+.+.+++.++++ |+|+|+.-
T Consensus 155 ~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 155 EAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp HTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred HcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 4688877664321 245667777654 7888765 4789999999998 99999876
No 224
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=42.32 E-value=44 Score=23.54 Aligned_cols=48 Identities=2% Similarity=0.110 Sum_probs=34.7
Q ss_pred HHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEc---CChHHHHHHHHHH
Q 028497 147 LVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVT---SNPILFQRVMQDI 195 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~T---D~P~~~~~~~~~~ 195 (208)
.++.++++|+++.+-|-+....++..+ .+|++ ++. +.|..+..+++++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~~~~k~~~l~~~~~~~ 98 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHGIDRKDLALKQWCEEQ 98 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEESCSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeCCCChHHHHHHHHHHc
Confidence 689999999999999977766555554 57888 554 3566666666554
No 225
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=42.20 E-value=53 Score=29.81 Aligned_cols=50 Identities=18% Similarity=0.164 Sum_probs=38.8
Q ss_pred HHHHHHhCCCeEEEeeC---CCHHHHHHHHhCCCCEEEcCChHHHHHHHHHHHh
Q 028497 147 LVRTFHGRNKRVFAWTV---DDEDSMRKMLHERVDAVVTSNPILFQRVMQDIRT 197 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv---~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~ 197 (208)
.++.+|++|+++.+++- ++++....+.++|++++.. .|..+.........
T Consensus 738 ~v~aar~~g~~vgicGe~~~~dp~~~~~~~~~G~~~~s~-~p~~v~~~~~~~~~ 790 (794)
T 2ols_A 738 AISACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSL-NPDTVIETWLYLAN 790 (794)
T ss_dssp HHHHHHTTTCEEEEESSHHHHCHHHHHHHHHHTCCEEEE-CGGGHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEecccCCCCHHHHHHHHHCCCCEEEE-CHhHHHHHHHHHHH
Confidence 36678999999988752 4888999999999999999 78776654444333
No 226
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=42.13 E-value=1.3e+02 Score=24.72 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=14.5
Q ss_pred CHHHHHHHHhCCCCEEEcCChHHHHHH
Q 028497 165 DEDSMRKMLHERVDAVVTSNPILFQRV 191 (208)
Q Consensus 165 ~~~~~~~~~~~gvd~i~TD~P~~~~~~ 191 (208)
++++++.+++.|+..+..|.++++..+
T Consensus 116 ~~~~l~~a~~~gv~~~~vds~~el~~l 142 (425)
T 1f3t_A 116 QISHIRYARDSGVDVMTFDCVDELEKV 142 (425)
T ss_dssp CHHHHHHHHHTTCCEEEECSHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEeCCHHHHHHH
Confidence 455555555555554555555555443
No 227
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=41.86 E-value=72 Score=23.98 Aligned_cols=53 Identities=15% Similarity=0.070 Sum_probs=37.3
Q ss_pred hcCceEeeccccc-CHHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 131 RKAGVVGVYHPLI-DEKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 131 ~~~~~~~~~~~~~-~~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.|...+.+-.+.- ..+.++.+++. +..+..=||-+.++++.+++.|++.|+|-
T Consensus 37 gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP 92 (217)
T 3lab_A 37 GGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSP 92 (217)
T ss_dssp TTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEES
T ss_pred cCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeC
Confidence 4666554432221 12456666542 56778889999999999999999999996
No 228
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=41.66 E-value=81 Score=24.13 Aligned_cols=50 Identities=18% Similarity=0.323 Sum_probs=35.2
Q ss_pred HHHHHHHhC-CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC----------ChHHHHHHHHHHH
Q 028497 146 KLVRTFHGR-NKRVFA-WTVDDEDSMRKMLHERVDAVVTS----------NPILFQRVMQDIR 196 (208)
Q Consensus 146 ~~v~~~~~~-g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD----------~P~~~~~~~~~~~ 196 (208)
++++.+++. ++++.+ .++++++.+.. +..|+|+++.- .++.+.++++..+
T Consensus 196 ~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~~~~~~~~~~~~~~~~ 257 (262)
T 2ekc_A 196 KKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLAGQKKIEDLGNLVKELK 257 (262)
T ss_dssp HHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhhhhhHHHHHHHHHHHH
Confidence 567777764 677765 56888999999 67789999863 3445566665554
No 229
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=41.65 E-value=43 Score=26.04 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=29.9
Q ss_pred HHHHHHHHhC-CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC
Q 028497 145 EKLVRTFHGR-NKRVFA-WTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 145 ~~~v~~~~~~-g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.++++.+++. +++|.+ .++++++.++++ .|+||++.-
T Consensus 191 ~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 191 KDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVG 229 (271)
T ss_dssp HHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEEC
T ss_pred HHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEEC
Confidence 4678888876 678765 578999999997 899999875
No 230
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=41.44 E-value=59 Score=25.25 Aligned_cols=50 Identities=4% Similarity=0.081 Sum_probs=35.5
Q ss_pred HHHHHHHHhCC---CeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 145 EKLVRTFHGRN---KRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g---~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
..-++.+++.. +++.+ .+++.++++.+++.|+|+|.+| .|+.+++..+..
T Consensus 169 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l 223 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYR 223 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 34566666643 35555 7788899999999999999999 466666555543
No 231
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=41.41 E-value=16 Score=27.59 Aligned_cols=39 Identities=13% Similarity=0.206 Sum_probs=28.3
Q ss_pred HHHHHHHHhC-CCeEEEeeC-CC------HHHHHHHHhCCCCEEEcC
Q 028497 145 EKLVRTFHGR-NKRVFAWTV-DD------EDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 145 ~~~v~~~~~~-g~~v~~wtv-~~------~~~~~~~~~~gvd~i~TD 183 (208)
.+.++.+++. +++|.+-+. |. .+.++.+.+.|+|+|+..
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV 115 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC
Confidence 4567777764 567776663 54 577888889999999876
No 232
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=41.07 E-value=29 Score=27.61 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=30.8
Q ss_pred HHHHHhC-CCeEEEeeCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 148 VRTFHGR-NKRVFAWTVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 148 v~~~~~~-g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
++.++++ |+++...+..+..-+..+.+.|+|++-.|.-
T Consensus 223 ~~~i~~~~g~~~i~~~~g~~~~l~~l~~~g~d~~~~d~~ 261 (338)
T 2eja_A 223 ISELKDFSDTPVIYFFRGSSSFIDLAVDYRADALSVDWS 261 (338)
T ss_dssp HHHHHHHCCCCEEEEESSHHHHHHHHTTSCCSEEECCTT
T ss_pred HHHHhhcCCCCEEEEcCCcHHHHHHHHHcCCCEEEeCCC
Confidence 5667776 8998888877777788888999999988843
No 233
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=41.00 E-value=33 Score=26.49 Aligned_cols=136 Identities=8% Similarity=-0.012 Sum_probs=66.7
Q ss_pred CCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceE---EEeeC-------HHHHHHHHhh-ccCCe
Q 028497 42 TTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCL---VWAKS-------DNLVRDIMRL-SSNVT 110 (208)
Q Consensus 42 ptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~i---i~Sf~-------~~~l~~l~~~-~p~~~ 110 (208)
++++++++.++.....+.... ..-+.........++.++.+....+ +..-. .+.++.++++ .+++.
T Consensus 52 ~~~~~~~~~l~~~~~~~~pn~---~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~ 128 (264)
T 1xm3_A 52 ASQPNFLEQLDLSKYTLLPNT---AGASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFI 128 (264)
T ss_dssp ------CTTCCGGGSEEEEEC---TTCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHhcCCeEcCCc---cccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeE
Confidence 567888887765333332221 1112111111355556665433332 22211 1456666664 34666
Q ss_pred EEEEEEecCCCchhhhHhhhhcCceEee-------cccccCHHHHHHHHh-CCCeEEE-eeCCCHHHHHHHHhCCCCEEE
Q 028497 111 AGYIIMVDPSTGFRTNLLRIRKAGVVGV-------YHPLIDEKLVRTFHG-RNKRVFA-WTVDDEDSMRKMLHERVDAVV 181 (208)
Q Consensus 111 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~-~g~~v~~-wtv~~~~~~~~~~~~gvd~i~ 181 (208)
++.+.. +.. .........|++++.. .....+++.++.+++ -++++.+ .++.+++++..+++.|+|+|+
T Consensus 129 vi~~~~--~~~-~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 129 VLPYTS--DDV-VLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp EEEEEC--SCH-HHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred EEEEcC--CCH-HHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEE
Confidence 654332 211 1011112356776522 111234677777664 4677766 578999999999999999988
Q ss_pred cC
Q 028497 182 TS 183 (208)
Q Consensus 182 TD 183 (208)
..
T Consensus 206 VG 207 (264)
T 1xm3_A 206 LN 207 (264)
T ss_dssp ES
T ss_pred Ec
Confidence 65
No 234
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=40.95 E-value=94 Score=21.99 Aligned_cols=46 Identities=15% Similarity=0.241 Sum_probs=31.7
Q ss_pred HHHHHHHHhCCCeEE---EeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVF---AWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~---~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~ 195 (208)
+.-++.++++|++.. .|+.++.+ .+.+.|++.+. .|..+.+.++++
T Consensus 167 ~~Di~aA~~aG~~~i~~v~~g~~~~~---~l~~~~~~~i~--~~~eli~~l~eL 215 (216)
T 3kbb_A 167 KSGVEAAKSAGIERIYGVVHSLNDGK---ALLEAGAVALV--KPEEILNVLKEV 215 (216)
T ss_dssp HHHHHHHHHTTCCCEEEECCSSSCCH---HHHHTTCSEEE--CGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEecCCCCCHH---HHHhCCCcEEC--CHHHHHHHHHHH
Confidence 456889999999843 34455443 45678888776 478888777653
No 235
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=40.69 E-value=72 Score=20.63 Aligned_cols=48 Identities=4% Similarity=0.008 Sum_probs=33.2
Q ss_pred HHHHHHHhC--CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQ 193 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~ 193 (208)
++++.+++. ..++.+.|.. +.+...++++.|++++++- .+..+...++
T Consensus 76 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~ 128 (135)
T 3snk_A 76 PGIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWLHKPLDGKELLNAVT 128 (135)
T ss_dssp TTHHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhccCCCCHHHHHHHHH
Confidence 455666554 5788888764 5677888999999999886 4455554444
No 236
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=40.54 E-value=80 Score=24.24 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCeEEEeeCC-CH----HHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGRNKRVFAWTVD-DE----DSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~-~~----~~~~~~~~~gvd~i~TD 183 (208)
.+-+.++++|+.+.+...+ +. ..++.++..++|||+..
T Consensus 24 gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~ 66 (330)
T 3uug_A 24 NIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIA 66 (330)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4456677788877665433 32 23566667788888865
No 237
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=40.44 E-value=81 Score=21.13 Aligned_cols=112 Identities=11% Similarity=0.172 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhh---hhcCceEeeccc--ccCHH
Q 028497 72 GLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLR---IRKAGVVGVYHP--LIDEK 146 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~ 146 (208)
.+-..+++.+.+.|. +.+++..+++.++.+++ .++.+ .. .+... .+..+ ..+++.+..-.+ ..+..
T Consensus 17 ~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~--~g~~~--i~-gd~~~---~~~l~~a~i~~ad~vi~~~~~~~~n~~ 87 (140)
T 3fwz_A 17 RVGSLLGEKLLASDI-PLVVIETSRTRVDELRE--RGVRA--VL-GNAAN---EEIMQLAHLECAKWLILTIPNGYEAGE 87 (140)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH--TTCEE--EE-SCTTS---HHHHHHTTGGGCSEEEECCSCHHHHHH
T ss_pred HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH--cCCCE--EE-CCCCC---HHHHHhcCcccCCEEEEECCChHHHHH
Confidence 566778888888774 67778889988888876 33333 22 22222 12222 234554432222 22223
Q ss_pred HHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 147 LVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 147 ~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
.+..+++. +.++.+ -+++++..+.+.++|+|.++.-.-....++.+
T Consensus 88 ~~~~a~~~~~~~~iia-r~~~~~~~~~l~~~G~d~vi~p~~~~a~~i~~ 135 (140)
T 3fwz_A 88 IVASARAKNPDIEIIA-RAHYDDEVAYITERGANQVVMGEREIARTMLE 135 (140)
T ss_dssp HHHHHHHHCSSSEEEE-EESSHHHHHHHHHTTCSEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCeEEE-EECCHHHHHHHHHCCCCEEECchHHHHHHHHH
Confidence 44555554 344444 34788888999999999999644444444443
No 238
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=40.37 E-value=47 Score=24.95 Aligned_cols=41 Identities=12% Similarity=0.189 Sum_probs=31.8
Q ss_pred cCHHHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 143 IDEKLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 143 ~~~~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
.+.+.++.+++ .++++.+- ++++.+++.++.+.|+++++.-
T Consensus 182 ~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vG 224 (253)
T 1thf_D 182 YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 224 (253)
T ss_dssp CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHH
Confidence 35677777765 47887764 5888899999999999998754
No 239
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=40.32 E-value=33 Score=28.97 Aligned_cols=52 Identities=13% Similarity=0.110 Sum_probs=39.3
Q ss_pred hcCceEeeccc--cc--CHHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 131 RKAGVVGVYHP--LI--DEKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 131 ~~~~~~~~~~~--~~--~~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.|++.+.+... .. ..+.++.+++. +++|.+-++.+.++++.+.+.|+|+|..
T Consensus 248 aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 248 AGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred hCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEE
Confidence 67787765332 11 34667777776 7998876778899999999999999986
No 240
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=40.32 E-value=50 Score=23.24 Aligned_cols=52 Identities=10% Similarity=0.086 Sum_probs=36.8
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHHHHH-HhCCCCEEEc---CChHHHHHHHHHH
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSMRKM-LHERVDAVVT---SNPILFQRVMQDI 195 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~~~~-~~~gvd~i~T---D~P~~~~~~~~~~ 195 (208)
+.+.++.++++|+++.+-|-+....++.. ..+|++.++. +.|..+..+++++
T Consensus 40 ~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~~k~k~~~~~~~~~~~ 95 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQA 95 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEESCSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecCCCCcHHHHHHHHHHc
Confidence 35789999999999999998766555544 4678887764 3555555666554
No 241
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=40.31 E-value=40 Score=25.58 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=38.1
Q ss_pred hhcCceEeecc-------cccCHHHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 130 IRKAGVVGVYH-------PLIDEKLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 130 ~~~~~~~~~~~-------~~~~~~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
..|++.+.+.. .-.+.++++.+.+ .++++.+= ++.+.+++.++.+.|+++++.-
T Consensus 167 ~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 167 KRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHcc
Confidence 36777655421 1234677777765 47887764 6888999999999999998765
No 242
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=40.18 E-value=39 Score=26.64 Aligned_cols=52 Identities=15% Similarity=0.227 Sum_probs=38.4
Q ss_pred cCHHHHHHHHhC-CCeEEE---eeCCCHHHHHHHHhCCCCEEEc-------CChHHHHHHHHH
Q 028497 143 IDEKLVRTFHGR-NKRVFA---WTVDDEDSMRKMLHERVDAVVT-------SNPILFQRVMQD 194 (208)
Q Consensus 143 ~~~~~v~~~~~~-g~~v~~---wtv~~~~~~~~~~~~gvd~i~T-------D~P~~~~~~~~~ 194 (208)
.+.++++.+++. .++|.+ =.+.+++++..++++|+|||+. .+|..+.+.+.+
T Consensus 185 ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~ 247 (291)
T 3o07_A 185 VPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVE 247 (291)
T ss_dssp SCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 345677777664 567754 3578999999999999999874 468887766654
No 243
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=39.89 E-value=69 Score=23.17 Aligned_cols=50 Identities=6% Similarity=0.015 Sum_probs=36.2
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHH-HhCCCCEEEcC---ChHHHHHHHHHH
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKM-LHERVDAVVTS---NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~-~~~gvd~i~TD---~P~~~~~~~~~~ 195 (208)
..++.++++|+++.+-|-+....++.. -.+|++.++.. .|..+..+++++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~ 112 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQDDKVQAYYDICQKL 112 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHHHh
Confidence 348999999999999998776555444 47899887654 556666666554
No 244
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=39.87 E-value=1.4e+02 Score=24.94 Aligned_cols=90 Identities=8% Similarity=0.073 Sum_probs=49.0
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCe--EEEee--CCCHHHHHHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKR--VFAWT--VDDEDSMRKM 172 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~--v~~wt--v~~~~~~~~~ 172 (208)
+.++.+++..|+.++.+....++.... .......| .. ....+..=+..+++.|+. ..+|+ ..+.++++.+
T Consensus 60 ~n~~~l~~~~~~~~i~yavKAn~~~~v-~~~l~~~G-~g----~dvaS~~E~~~~~~aG~~~~~iv~~g~~k~~~ei~~a 133 (471)
T 2oo0_A 60 KKHLRWLKALPRVTPFYAVKCNDSKAI-VKTLAATG-TG----FDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYA 133 (471)
T ss_dssp HHHHHHHHHCTTEEEEEEGGGCCCHHH-HHHHHHHT-CE----EEECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEEeeCCCHHH-HHHHHHcC-Cc----EEEeCHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHH
Confidence 345666666676655544433331111 11112233 21 222344445666677773 45554 2467778888
Q ss_pred HhCCCCEEEcCChHHHHHHH
Q 028497 173 LHERVDAVVTSNPILFQRVM 192 (208)
Q Consensus 173 ~~~gvd~i~TD~P~~~~~~~ 192 (208)
++.|+..+..|.+.++.++-
T Consensus 134 ~~~gv~~~~vds~~el~~l~ 153 (471)
T 2oo0_A 134 ANNGVQMMTFDSEVELMKVA 153 (471)
T ss_dssp HHTTCCEEEECSHHHHHHHH
T ss_pred HHCCCCEEEECCHHHHHHHH
Confidence 88888777778887777654
No 245
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=39.84 E-value=58 Score=23.21 Aligned_cols=50 Identities=0% Similarity=0.110 Sum_probs=36.4
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcC---ChHHHHHHHHHH
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTS---NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD---~P~~~~~~~~~~ 195 (208)
..++.++++|+++.+-|-+....++..+ .+|++.++.. .|..+..+++++
T Consensus 53 ~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 53 QGIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGREDKLVVLDKLLAEL 106 (189)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCcCChHHHHHHHHHHc
Confidence 3789999999999999987766655554 5788877654 565566655544
No 246
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=39.84 E-value=40 Score=27.97 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=32.6
Q ss_pred HHHHHHHHhCCCeEEEeeCC--------------CHHHHHHHHhCCCCEEEcCCh
Q 028497 145 EKLVRTFHGRNKRVFAWTVD--------------DEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~--------------~~~~~~~~~~~gvd~i~TD~P 185 (208)
+.+++++|++|+++.+|.-. ...+++.+.+.|||+|=.|+-
T Consensus 80 ~~l~~~i~~~Glk~Giw~~~g~~~c~~~Pgs~~~~~~d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 80 DGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYEDVDAADFADWGVDYLKYDNC 134 (417)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCchhccCcchHhHHHHHHHHHHHcCCCEEEECCC
Confidence 57899999999999999621 134677788999999988864
No 247
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=39.71 E-value=36 Score=28.57 Aligned_cols=59 Identities=5% Similarity=0.024 Sum_probs=44.2
Q ss_pred HHHHHHHhC---CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC------ChHHHHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGR---NKRVFA-WTVDDEDSMRKMLHERVDAVVTS------NPILFQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD------~P~~~~~~~~~~~~~~~~~~~ 204 (208)
+++..++++ +++|.. -.+.+.+++.+++..|+|+|..= .|..+.++.+++..-....|+
T Consensus 361 ~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 361 KFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp HHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcChHHHHHHHHHHHHHHHHhCC
Confidence 456666554 688764 46899999999999999998653 567777777777766667775
No 248
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=39.56 E-value=1.1e+02 Score=22.90 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=18.1
Q ss_pred HHHHHhCCCeEEEeeCC-CH----HHHHHHHhCCCCEEEc
Q 028497 148 VRTFHGRNKRVFAWTVD-DE----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv~-~~----~~~~~~~~~gvd~i~T 182 (208)
-+.+.++|+.+.+...+ +. ..++.++..++|||+.
T Consensus 31 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~ 70 (293)
T 3l6u_A 31 KAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFI 70 (293)
T ss_dssp HHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34455666666554433 22 2344455566666664
No 249
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=39.04 E-value=1.5e+02 Score=23.72 Aligned_cols=81 Identities=7% Similarity=0.029 Sum_probs=52.2
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHG---RNKRVFAWTVDDEDSMRKML 173 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~g~~v~~wtv~~~~~~~~~~ 173 (208)
++++++++..|..++.+..... ... .+..+ .|++++-... .+++.++.+.+ ...++.+=+-=+++.++.+.
T Consensus 220 ~Av~~ar~~~p~~kIeVEVdtl--dea-~eAl~-aGaD~I~LDn--~~~~~l~~av~~l~~~v~ieaSGGIt~~~I~~~a 293 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEVETETL--AEL-EEAIS-AGADIIMLDN--FSLEMMREAVKINAGRAALENSGNITLDNLKECA 293 (320)
T ss_dssp HHHHHHHHHSTTSCEEEEESSH--HHH-HHHHH-TTCSEEEEES--CCHHHHHHHHHHHTTSSEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEECCH--HHH-HHHHH-cCCCEEEECC--CCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHH
Confidence 4677888888887776655321 101 12222 6778765533 45555444332 35677777766899999999
Q ss_pred hCCCCEEEcC
Q 028497 174 HERVDAVVTS 183 (208)
Q Consensus 174 ~~gvd~i~TD 183 (208)
+.|||+|-+-
T Consensus 294 ~tGVD~isvG 303 (320)
T 3paj_A 294 ETGVDYISVG 303 (320)
T ss_dssp TTTCSEEECT
T ss_pred HcCCCEEEEC
Confidence 9999999764
No 250
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=38.99 E-value=39 Score=25.77 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=29.3
Q ss_pred HHHHHHHh-CCCeEEE-eeCCCHHHHHHHHhCCCCEEEc
Q 028497 146 KLVRTFHG-RNKRVFA-WTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~-~g~~v~~-wtv~~~~~~~~~~~~gvd~i~T 182 (208)
++++.+++ .++++.+ .++++++.+..+.+.|+|+++.
T Consensus 191 ~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvV 229 (262)
T 1rd5_A 191 SLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVII 229 (262)
T ss_dssp HHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 46677765 3678766 5688899999999999999874
No 251
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=38.83 E-value=42 Score=26.54 Aligned_cols=39 Identities=8% Similarity=0.188 Sum_probs=27.3
Q ss_pred HHHHHHHhCCCCEEE------cCC-hHHHHHHHHHHHhhhhhcCcc
Q 028497 167 DSMRKMLHERVDAVV------TSN-PILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 167 ~~~~~~~~~gvd~i~------TD~-P~~~~~~~~~~~~~~~~~~~~ 205 (208)
...+.++++|+|+|. .|. .....+.+.+....|.+.|.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p 157 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLL 157 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCE
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCc
Confidence 345677888888887 344 455556677778888888864
No 252
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=38.71 E-value=75 Score=20.23 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=33.7
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++ .+.++.+.|.. +.+....+++.|++++++= .++.+...++.
T Consensus 63 ~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~ 118 (122)
T 3gl9_A 63 TVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKH 118 (122)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHHHHH
Confidence 44555554 35788888764 5677888999999999875 55555555543
No 253
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=38.61 E-value=90 Score=21.10 Aligned_cols=40 Identities=8% Similarity=0.213 Sum_probs=29.3
Q ss_pred CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHH
Q 028497 154 RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQ 193 (208)
Q Consensus 154 ~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~ 193 (208)
..++|.+-|.. +.+...++++.|++++++= .|..+.+.++
T Consensus 86 ~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~ 128 (134)
T 3to5_A 86 KHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLD 128 (134)
T ss_dssp TTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Confidence 46788888865 5778889999999999985 4444444443
No 254
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=38.61 E-value=48 Score=26.51 Aligned_cols=40 Identities=8% Similarity=0.077 Sum_probs=31.5
Q ss_pred HHHHH---HhCCCCEEEcC---ChHHHHHHHHHHHhhhhhcCc-ccc
Q 028497 168 SMRKM---LHERVDAVVTS---NPILFQRVMQDIRTQCLEEGF-SLI 207 (208)
Q Consensus 168 ~~~~~---~~~gvd~i~TD---~P~~~~~~~~~~~~~~~~~~~-~~~ 207 (208)
+++++ ++.|+|.+||- +++.+.+++++....|...|. ..|
T Consensus 167 d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vP 213 (315)
T 3ijd_A 167 EHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVP 213 (315)
T ss_dssp HHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCC
T ss_pred HHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCc
Confidence 44444 47999999999 577888888777789999998 665
No 255
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=38.41 E-value=54 Score=26.35 Aligned_cols=60 Identities=13% Similarity=0.167 Sum_probs=45.8
Q ss_pred HHHHHHHhC--CCeE-EEeeCCCHHHHHHHHhCCCCEEEcC------ChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR--NKRV-FAWTVDDEDSMRKMLHERVDAVVTS------NPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~--g~~v-~~wtv~~~~~~~~~~~~gvd~i~TD------~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+.+..++++ ++++ .+=+|.+.+++.+++..|++.|+.= -|..+.++.+++..-+.++||.
T Consensus 266 ~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~~~I~~~L~~~L~~~G~~ 334 (354)
T 3tjx_A 266 ANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERLTSELLGVMAKKRYQ 334 (354)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHHHHHHHHHHHHHHHcCCC
Confidence 345555443 5666 4457899999999999999987653 5889999999998888888874
No 256
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=38.40 E-value=1.5e+02 Score=24.74 Aligned_cols=88 Identities=16% Similarity=-0.019 Sum_probs=52.2
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecc--------------cccCH----HHHHHHHhCCCeE
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYH--------------PLIDE----KLVRTFHGRNKRV 158 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~----~~v~~~~~~g~~v 158 (208)
+.++.+++..|++++. ... .........+...|++.+.+-. ...+. +....++..+++|
T Consensus 263 ~~i~~l~~~~p~~pvi--~G~-v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipv 339 (491)
T 1zfj_A 263 RKIAEIRAHFPNRTLI--AGN-IATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTI 339 (491)
T ss_dssp HHHHHHHHHCSSSCEE--EEE-ECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCcEe--CCC-ccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCE
Confidence 3567777777887775 221 1111111112337777763310 01112 2233334578888
Q ss_pred EEe-eCCCHHHHHHHHhCCCCEEEcCChHH
Q 028497 159 FAW-TVDDEDSMRKMLHERVDAVVTSNPIL 187 (208)
Q Consensus 159 ~~w-tv~~~~~~~~~~~~gvd~i~TD~P~~ 187 (208)
.+= ++.+..++.+++.+|+++++.-.+-.
T Consensus 340 ia~GGi~~~~di~kal~~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 340 IADGGIKYSGDIVKALAAGGNAVMLGSMFA 369 (491)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred EeeCCCCCHHHHHHHHHcCCcceeeCHHhh
Confidence 764 67999999999999999999876653
No 257
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=38.21 E-value=86 Score=20.77 Aligned_cols=50 Identities=14% Similarity=0.273 Sum_probs=35.6
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++ .+.++.+.|.. +......+++.|++++++= .+..+.+.+++.
T Consensus 76 ~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 76 DILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQL 132 (152)
T ss_dssp HHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHH
Confidence 45566655 46778888765 4667788999999999876 566666666654
No 258
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=38.09 E-value=1.4e+02 Score=23.11 Aligned_cols=98 Identities=12% Similarity=0.181 Sum_probs=56.4
Q ss_pred HhcCCcceEEE--eeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhh--hhcCceEeecccc-----cCHHHHHHHH
Q 028497 82 ERTKCYNCLVW--AKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLR--IRKAGVVGVYHPL-----IDEKLVRTFH 152 (208)
Q Consensus 82 ~~~~~~~~ii~--Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~v~~~~ 152 (208)
+.+|..-..++ ..+++.++.+.+..-++-.-.+...+. ..++.+ ..|+++++++... ++.+....+.
T Consensus 123 r~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~----~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~ 198 (258)
T 4a29_A 123 YNLGADTVLLIVKILTERELESLLEYARSYGMEPLILIND----ENDLDIALRIGARFIGIMSRDFETGEINKENQRKLI 198 (258)
T ss_dssp HHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESS----HHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHH
T ss_pred HHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcch----HHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHH
Confidence 34565444333 346666777666554444444555331 123322 3688888876432 2333323222
Q ss_pred h---CCC-eEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 153 G---RNK-RVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 153 ~---~g~-~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
. .+. .|.--++.++++++++.+.|++++.--
T Consensus 199 ~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 199 SMIPSNVVKVAKLGISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp TTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEEC
T ss_pred hhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEEC
Confidence 2 233 345568999999999999999998754
No 259
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=38.05 E-value=82 Score=20.47 Aligned_cols=50 Identities=10% Similarity=0.142 Sum_probs=36.6
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++ .+.++.+.|.. +.+....+++.|++++++- .+..+.+.++..
T Consensus 68 ~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 124 (140)
T 3lua_A 68 EVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSV 124 (140)
T ss_dssp HHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHH
Confidence 45555555 57788888764 5677888999999999886 667777666654
No 260
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=37.67 E-value=96 Score=22.21 Aligned_cols=49 Identities=12% Similarity=0.226 Sum_probs=34.2
Q ss_pred HHHHHHHh------CCCeEEEeeCC--CHHHHHHHHhCCCCEEEcCChHHHHHHHHH
Q 028497 146 KLVRTFHG------RNKRVFAWTVD--DEDSMRKMLHERVDAVVTSNPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~------~g~~v~~wtv~--~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~ 194 (208)
++++.+++ ..+++.+.|.. +.+....+++.|++++++=-...+.+.++.
T Consensus 136 el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~~L~~~i~~ 192 (206)
T 3mm4_A 136 EATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLNQLANVIRE 192 (206)
T ss_dssp HHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCTTHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHHHHHHHHHH
Confidence 44555543 57888888875 567888899999999988744455555554
No 261
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=37.39 E-value=84 Score=22.58 Aligned_cols=37 Identities=11% Similarity=0.021 Sum_probs=27.8
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEc
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~T 182 (208)
++++.++++|+++.+-|-.....++..+ .+|++.++.
T Consensus 99 ~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~ 136 (232)
T 3fvv_A 99 DVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIA 136 (232)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE
Confidence 6788899999999999977766655554 578875543
No 262
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=37.35 E-value=1.2e+02 Score=22.68 Aligned_cols=35 Identities=6% Similarity=0.260 Sum_probs=18.4
Q ss_pred HHHHHhCCCeEEEeeCC-CH----HHHHHHHhCCCCEEEc
Q 028497 148 VRTFHGRNKRVFAWTVD-DE----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv~-~~----~~~~~~~~~gvd~i~T 182 (208)
-+.+.++|+.+.+...+ +. ..++.+...++|||+.
T Consensus 38 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi 77 (298)
T 3tb6_A 38 ESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIV 77 (298)
T ss_dssp HHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEE
Confidence 34555666666555433 22 2344455566666665
No 263
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=37.33 E-value=39 Score=25.03 Aligned_cols=35 Identities=6% Similarity=-0.023 Sum_probs=27.1
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCE
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDA 179 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~ 179 (208)
.+.++.++++|+++.+-|.+....+..+. .+|.++
T Consensus 28 ~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 28 IESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence 35678889999999999999987776665 456653
No 264
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=37.30 E-value=77 Score=22.42 Aligned_cols=50 Identities=10% Similarity=0.059 Sum_probs=36.8
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcC---ChHHHHHHHHHH
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTS---NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD---~P~~~~~~~~~~ 195 (208)
..++.++++|+++.+-|-++...++..+ .+|++.++.. .|..+..+++++
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~ 113 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKL 113 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECSCSCSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecCCCCCHHHHHHHHHHc
Confidence 4789999999999999987665555544 5688877653 666777766654
No 265
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=37.12 E-value=47 Score=25.25 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=23.0
Q ss_pred HhCCCeEEEeeCCCHHHHHHHHhCCC-CEEEcCC
Q 028497 152 HGRNKRVFAWTVDDEDSMRKMLHERV-DAVVTSN 184 (208)
Q Consensus 152 ~~~g~~v~~wtv~~~~~~~~~~~~gv-d~i~TD~ 184 (208)
|.+...++.-|. +.++++++.+.|+ +|++||-
T Consensus 9 ~~~~~~~flDta-~~~ei~~~~~~g~i~GvTTNP 41 (230)
T 1vpx_A 9 HHHHMKIFLDTA-NLEEIKKGVEWGIVDGVTTNP 41 (230)
T ss_dssp --CCCEEEEECC-CHHHHHHHHHTTCCCEEECCC
T ss_pred cccceEEEEcCC-CHHHHHHHHhcCCcCCCccCH
Confidence 345566677776 5678999998885 9999973
No 266
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=37.04 E-value=82 Score=20.19 Aligned_cols=49 Identities=12% Similarity=0.287 Sum_probs=33.7
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++ ...++.+.|.. +......+++.|++++++= .|+.+.+.++.
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~ 123 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEV 123 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHH
Confidence 45555554 35678888765 4667788999999998885 55555555543
No 267
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=36.87 E-value=1.5e+02 Score=23.25 Aligned_cols=54 Identities=9% Similarity=0.159 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCCeEEEe---eC-------CCHH----HHHHHHhCCCCEE-EcC-----ChHHHHHHHHHHHhh
Q 028497 145 EKLVRTFHGRNKRVFAW---TV-------DDED----SMRKMLHERVDAV-VTS-----NPILFQRVMQDIRTQ 198 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~w---tv-------~~~~----~~~~~~~~gvd~i-~TD-----~P~~~~~~~~~~~~~ 198 (208)
.+.++++++.|+.|.++ ++ .+++ .++.+.++|++.| +.| .|..+.++++..++.
T Consensus 125 ~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 125 KQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh
Confidence 45688999999998643 11 1333 3556678899876 334 799999999887654
No 268
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=36.82 E-value=52 Score=25.02 Aligned_cols=37 Identities=8% Similarity=-0.012 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCeEEEeeCC---CH----HHHHHHHhCCCCEEEc
Q 028497 146 KLVRTFHGRNKRVFAWTVD---DE----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~---~~----~~~~~~~~~gvd~i~T 182 (208)
.+-+.++++|+.+.+...+ +. ..++.++..++|||+.
T Consensus 24 gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii 67 (297)
T 3rot_A 24 GAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIAT 67 (297)
T ss_dssp HHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 3445566677777666544 32 2455566677777775
No 269
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=36.78 E-value=1e+02 Score=22.86 Aligned_cols=37 Identities=3% Similarity=0.140 Sum_probs=23.3
Q ss_pred CHHHHHHHHhCC-C--eEEEeeCCCHHHHHHHHhCCCCEE
Q 028497 144 DEKLVRTFHGRN-K--RVFAWTVDDEDSMRKMLHERVDAV 180 (208)
Q Consensus 144 ~~~~v~~~~~~g-~--~v~~wtv~~~~~~~~~~~~gvd~i 180 (208)
..+.++.+++.- . .+.+.+-|....++.+.+.|+|+|
T Consensus 52 ~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v 91 (228)
T 1h1y_A 52 GAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGF 91 (228)
T ss_dssp CHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEE
T ss_pred CHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEE
Confidence 367777777642 2 333445333445777788899999
No 270
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=36.61 E-value=1.3e+02 Score=22.41 Aligned_cols=59 Identities=10% Similarity=0.158 Sum_probs=40.1
Q ss_pred HHHHHHHhCCCeEEE--eeCC-CHHHHHHHHhC--CCCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 146 KLVRTFHGRNKRVFA--WTVD-DEDSMRKMLHE--RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~--wtv~-~~~~~~~~~~~--gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
.+.+.++++|+.+.. ...+ +.+.++.+++. .+++|++-+-..+..+++..+ +.|..+|+
T Consensus 143 Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~A~g~~~al~----~~g~~vP~ 206 (277)
T 3hs3_A 143 AMTAEASKLKIDYLLEETPENNPYISAQSALNKSNQFDAIITVNDLYAAEIIKEAK----RRNLKIPD 206 (277)
T ss_dssp HHHHHHHHTTCEEEEEECCSSCHHHHHHHHHHTGGGCSEEECSSHHHHHHHHHHHH----HTTCCTTT
T ss_pred HHHHHHHHCCCCCCCCCccCCchHHHHHHHHcCCCCCCEEEECCHHHHHHHHHHHH----HcCCCCCC
Confidence 456778899998754 2111 15667777764 699999988888777776555 66666653
No 271
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=36.51 E-value=67 Score=24.67 Aligned_cols=39 Identities=10% Similarity=-0.004 Sum_probs=29.1
Q ss_pred HHHHHHhCCCeEEEeeCC---------CHHHHH----HHHhCCCCEEEcCCh
Q 028497 147 LVRTFHGRNKRVFAWTVD---------DEDSMR----KMLHERVDAVVTSNP 185 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~---------~~~~~~----~~~~~gvd~i~TD~P 185 (208)
+.+.+++.|+++.+|..- +.+... .+.+.|+|+|-|.+|
T Consensus 130 v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~ 181 (263)
T 1w8s_A 130 IKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT 181 (263)
T ss_dssp HHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 455677889999999744 544443 346789999999988
No 272
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=36.34 E-value=77 Score=23.79 Aligned_cols=36 Identities=8% Similarity=0.187 Sum_probs=18.2
Q ss_pred HHHHHHhCCCeEEEeeCCCHH-----HHHHHHhCCCCEEEc
Q 028497 147 LVRTFHGRNKRVFAWTVDDED-----SMRKMLHERVDAVVT 182 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~~~-----~~~~~~~~gvd~i~T 182 (208)
+.+.+.++|+.+.+...++.. .++.+...++|||+.
T Consensus 35 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi 75 (292)
T 3k4h_A 35 ISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIIL 75 (292)
T ss_dssp HHHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEE
Confidence 344556666666555443321 233344556666654
No 273
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=36.32 E-value=91 Score=23.76 Aligned_cols=37 Identities=22% Similarity=0.431 Sum_probs=18.3
Q ss_pred HHHHHHhCCCeEEEeeCC-CH----HHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNKRVFAWTVD-DE----DSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~-~~----~~~~~~~~~gvd~i~TD 183 (208)
+-+.+.++|+.+.+...+ +. ..++.++..++|||+..
T Consensus 24 i~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~ 65 (313)
T 3m9w_A 24 FVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVII 65 (313)
T ss_dssp HHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 334455566665554432 22 23444555566666543
No 274
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=36.16 E-value=1.1e+02 Score=23.72 Aligned_cols=54 Identities=11% Similarity=-0.026 Sum_probs=33.9
Q ss_pred hhhcCceEeecccccC--------HHHHHHHHhCCC----eEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 129 RIRKAGVVGVYHPLID--------EKLVRTFHGRNK----RVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 129 ~~~~~~~~~~~~~~~~--------~~~v~~~~~~g~----~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+..+++.+.+.....+ +++++.++++|. ++++=+.- -+...+.+.|+|++..|-
T Consensus 177 ~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~--~~~~~a~~iGad~~~~da 242 (262)
T 1xrs_B 177 VELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPR--INNEIAKELGYDAGFGPG 242 (262)
T ss_dssp HHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTT--CCHHHHHTTTCSEEECTT
T ss_pred HHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECCc--CCHHHHHHcCCeEEECCc
Confidence 4467887765443222 356888888884 44443332 233456788999999984
No 275
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=36.15 E-value=77 Score=24.03 Aligned_cols=38 Identities=11% Similarity=0.081 Sum_probs=22.7
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHH-----HHHHHHhCCCCEEEc
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDED-----SMRKMLHERVDAVVT 182 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~-----~~~~~~~~gvd~i~T 182 (208)
..+-+.+.++|+.+.+...++.. .++.+...+|||||.
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~ 74 (295)
T 3hcw_A 32 LGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFIL 74 (295)
T ss_dssp HHHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEE
Confidence 34455667778777766554321 234455677888775
No 276
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=36.06 E-value=1.6e+02 Score=23.32 Aligned_cols=89 Identities=13% Similarity=0.014 Sum_probs=55.3
Q ss_pred HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEee-ccc--cc-------------CHHHHHHHHh-CCCeE
Q 028497 96 DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGV-YHP--LI-------------DEKLVRTFHG-RNKRV 158 (208)
Q Consensus 96 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~-------------~~~~v~~~~~-~g~~v 158 (208)
.+.++++++..|..++.- ..-. .......+...|++++.+ .+. .. +...+..+.+ .+++|
T Consensus 137 ~~~i~~lr~~~~~~~vi~--G~v~-s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipV 213 (336)
T 1ypf_A 137 INMIQHIKKHLPESFVIA--GNVG-TPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPI 213 (336)
T ss_dssp HHHHHHHHHHCTTSEEEE--EEEC-SHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCE
T ss_pred HHHHHHHHHhCCCCEEEE--CCcC-CHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcE
Confidence 357888888777666542 1111 111112223478888765 111 00 2344444444 48888
Q ss_pred EEe-eCCCHHHHHHHHhCCCCEEEcCChHH
Q 028497 159 FAW-TVDDEDSMRKMLHERVDAVVTSNPIL 187 (208)
Q Consensus 159 ~~w-tv~~~~~~~~~~~~gvd~i~TD~P~~ 187 (208)
..- ++.+..++.+++.+|++++..-.|-.
T Consensus 214 Ia~GGI~~g~Dv~kalalGAdaV~iGr~~l 243 (336)
T 1ypf_A 214 IADGGIRTNGDVAKSIRFGATMVMIGSLFA 243 (336)
T ss_dssp EEESCCCSTHHHHHHHHTTCSEEEESGGGT
T ss_pred EEeCCCCCHHHHHHHHHcCCCEEEeChhhh
Confidence 774 68899999999999999999888776
No 277
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=36.03 E-value=87 Score=20.19 Aligned_cols=45 Identities=22% Similarity=0.190 Sum_probs=26.9
Q ss_pred HhhhhcCceEeeccccc---CHHHHHHHHhCCCeEEEeeCCCHHHHHHHH
Q 028497 127 LLRIRKAGVVGVYHPLI---DEKLVRTFHGRNKRVFAWTVDDEDSMRKML 173 (208)
Q Consensus 127 ~~~~~~~~~~~~~~~~~---~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~ 173 (208)
+.+..|+..+.+.|..- -.++-+..+++|..|.. +.+++++++-+
T Consensus 70 fvkslgaqvliiiydqdqnrleefsrevrrrgfevrt--vtspddfkksl 117 (134)
T 2l69_A 70 FVKSLGAQVLIIIYDQDQNRLEEFSREVRRRGFEVRT--VTSPDDFKKSL 117 (134)
T ss_dssp HHHHHCCCCEEEEECSCHHHHHHHHHHHHHTTCCEEE--ESSHHHHHHHH
T ss_pred HHHhcCCeEEEEEEeCchhHHHHHHHHHHhcCceEEE--ecChHHHHHHH
Confidence 44567777655443321 14566778899998654 44676665544
No 278
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=35.46 E-value=84 Score=22.30 Aligned_cols=39 Identities=13% Similarity=0.418 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCeEEEeeC--CCHHHHHHHHh-----CCCCEEEcC
Q 028497 145 EKLVRTFHGRNKRVFAWTV--DDEDSMRKMLH-----ERVDAVVTS 183 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv--~~~~~~~~~~~-----~gvd~i~TD 183 (208)
+.+.+.+.+.|..|.-+++ |+.+.+...+. .++|.|+|-
T Consensus 43 ~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVitt 88 (178)
T 3iwt_A 43 DIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIIST 88 (178)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEec
Confidence 5577888999999977753 66666655442 358998873
No 279
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=35.45 E-value=55 Score=26.58 Aligned_cols=40 Identities=10% Similarity=0.018 Sum_probs=32.5
Q ss_pred HHHHHHHHhCCCeEEEeeCC---------------CHHHHHHHHhCCCCEEEcCC
Q 028497 145 EKLVRTFHGRNKRVFAWTVD---------------DEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~---------------~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.+++++|+.|+++.+|.-. ...+++.+.+.|||+|=.|+
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~~~a~wGvdylK~D~ 140 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDG 140 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBCBCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCchhHhHHHHHHHHHHHhCCceEeecc
Confidence 67899999999999999521 13468888999999998884
No 280
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=35.43 E-value=1.5e+02 Score=22.98 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCeEE-EeeC-----CCHHHHHHHHhCCCCEEEc-CChHHHHHHHHHHHhhhhhcCccc
Q 028497 145 EKLVRTFHGRNKRVF-AWTV-----DDEDSMRKMLHERVDAVVT-SNPILFQRVMQDIRTQCLEEGFSL 206 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~-~wtv-----~~~~~~~~~~~~gvd~i~T-D~P~~~~~~~~~~~~~~~~~~~~~ 206 (208)
..+.+.+.++|+.+. ...+ +-...++++.+.++|+|+. -.+..+..+++..+ +.|+..
T Consensus 169 ~~~~~~l~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~dai~~~~~~~~a~~~~~~~~----~~g~~v 233 (375)
T 4evq_A 169 SGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFIKDYA----AANLGI 233 (375)
T ss_dssp HHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHCCSEEEEECCTHHHHHHHHHHH----HTTCCC
T ss_pred HHHHHHHHHcCCeEEEEEecCCCCccHHHHHHHHHhcCCCEEEEecCcchHHHHHHHHH----HcCCCc
Confidence 345667889999873 2222 2256778888889999998 66777777777655 455443
No 281
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=35.37 E-value=30 Score=26.68 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=31.5
Q ss_pred HHHHHHHhC---CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 146 KLVRTFHGR---NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
++++.+++. |+.+.+.++.+.++++++.+.|+++|..
T Consensus 114 ~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~ 153 (264)
T 1xm3_A 114 ETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMP 153 (264)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEE
T ss_pred HHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEE
Confidence 677888887 9999988888888999999999998644
No 282
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=35.00 E-value=52 Score=28.76 Aligned_cols=42 Identities=12% Similarity=0.017 Sum_probs=33.0
Q ss_pred HHHHHHHHhCCCeEEEeeC--C----------------------CHHHHHHHHhCCCCEEEcCChH
Q 028497 145 EKLVRTFHGRNKRVFAWTV--D----------------------DEDSMRKMLHERVDAVVTSNPI 186 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv--~----------------------~~~~~~~~~~~gvd~i~TD~P~ 186 (208)
+.+++++|+.|+++.+|.- . -..+++.+.+.|||+|=.|+..
T Consensus 80 ~~l~~~i~~~Glk~gi~~~~~~~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~~ 145 (614)
T 3a21_A 80 SAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWCG 145 (614)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSSCHHHHSCSSSCCCTTCSCTTCHHHHHHHHHHHTCSEEEEECHH
T ss_pred HHHHHHHHHCCCeeEEEecCCCccccccCCCCCCCCCchhhHHHHHHHHHHHHHcCCcEEEecccC
Confidence 5789999999999999861 1 1235677889999999999853
No 283
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=34.70 E-value=89 Score=22.74 Aligned_cols=49 Identities=8% Similarity=0.010 Sum_probs=33.5
Q ss_pred HHHHHHHHhC-CCeEEEe-eCCCH-HHHHHHHhCCCCEEEc-----CChHHHHHHHH
Q 028497 145 EKLVRTFHGR-NKRVFAW-TVDDE-DSMRKMLHERVDAVVT-----SNPILFQRVMQ 193 (208)
Q Consensus 145 ~~~v~~~~~~-g~~v~~w-tv~~~-~~~~~~~~~gvd~i~T-----D~P~~~~~~~~ 193 (208)
.+.++.+++. +.++.+- .+++. +.++.+.+.|+|+|+. +.|..+.+.++
T Consensus 50 ~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~ 106 (220)
T 2fli_A 50 ADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIK 106 (220)
T ss_dssp HHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCccccHHHHHHHHH
Confidence 7888888876 6666553 34664 3578888999999966 45555555544
No 284
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=34.65 E-value=77 Score=28.47 Aligned_cols=53 Identities=11% Similarity=0.166 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHH-HhCCCCEEEcC-ChHHHHHHHHHHHh
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKM-LHERVDAVVTS-NPILFQRVMQDIRT 197 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~-~~~gvd~i~TD-~P~~~~~~~~~~~~ 197 (208)
++.++.++++|+++.+=|.++....+.. .++|++.+..+ .|+.-.+++++++.
T Consensus 560 ~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~P~~K~~~v~~l~~ 614 (736)
T 3rfu_A 560 PETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIMPEDKSRIVSELKD 614 (736)
T ss_dssp HHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEecCHHHHHHHHHHHHh
Confidence 5789999999999999999988776665 46899988888 68887778877654
No 285
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=34.60 E-value=93 Score=22.86 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhh--hhcCceEeecc--cccCHHH
Q 028497 72 GLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLR--IRKAGVVGVYH--PLIDEKL 147 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~ 147 (208)
.+...+++.+.+.|. +++...+++.+..++ +++.+ .. .++... ..+.+ ..+++.+..-. ...+...
T Consensus 19 ~~G~~la~~L~~~g~--v~vid~~~~~~~~~~---~~~~~--i~-gd~~~~--~~l~~a~i~~ad~vi~~~~~d~~n~~~ 88 (234)
T 2aef_A 19 ESTLECLRELRGSEV--FVLAEDENVRKKVLR---SGANF--VH-GDPTRV--SDLEKANVRGARAVIVDLESDSETIHC 88 (234)
T ss_dssp HHHHHHHHHSTTSEE--EEEESCGGGHHHHHH---TTCEE--EE-SCTTCH--HHHHHTTCTTCSEEEECCSCHHHHHHH
T ss_pred hHHHHHHHHHHhCCe--EEEEECCHHHHHHHh---cCCeE--EE-cCCCCH--HHHHhcCcchhcEEEEcCCCcHHHHHH
Confidence 455667777766553 556777777666665 33333 22 233221 12222 23455443322 2223344
Q ss_pred HHHHHhCCCeEEEee-CCCHHHHHHHHhCCCCEEEcC
Q 028497 148 VRTFHGRNKRVFAWT-VDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 148 v~~~~~~g~~v~~wt-v~~~~~~~~~~~~gvd~i~TD 183 (208)
...+++.|..+.+++ ++++.....+.++|++.++.-
T Consensus 89 ~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~~~vi~p 125 (234)
T 2aef_A 89 ILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISP 125 (234)
T ss_dssp HHHHHHHCSSSEEEEECSSGGGHHHHHHHTCSEEECH
T ss_pred HHHHHHHCCCCeEEEEECCHhHHHHHHHCCCCEEECH
Confidence 566777776544443 466666777888999988763
No 286
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=34.51 E-value=67 Score=26.07 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=32.4
Q ss_pred CHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 144 DEKLVRTFHG-RNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 144 ~~~~v~~~~~-~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.+.++.+++ .++++.+=.+.+.++++.+.+.|+|+|....
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECC
Confidence 4455666554 6899988778899999999999999998643
No 287
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=34.10 E-value=1.9e+02 Score=23.59 Aligned_cols=110 Identities=7% Similarity=-0.002 Sum_probs=60.3
Q ss_pred HHHHHHhcCCcceEEEeeC--HHHHHHHHhhcc--------CCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHH
Q 028497 77 ILSVIERTKCYNCLVWAKS--DNLVRDIMRLSS--------NVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEK 146 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~Sf~--~~~l~~l~~~~p--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (208)
+.+++++++. ...+++.+ .+.++.+++..+ ++++.+....++.. .........|+ .+ ...+..
T Consensus 21 ~~~l~~~~~t-P~~vidl~~l~~n~~~l~~~~~~a~~~~~~~~~~~~avKan~~~-~v~~~l~~~G~-g~----~vas~~ 93 (434)
T 1twi_A 21 AIELAEKFGT-PLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANL-AITRLLAKLGC-GA----DVVSGG 93 (434)
T ss_dssp HHHHHHHHCS-SEEEEEHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEEGGGCCCH-HHHHHHHHTTC-EE----EECSHH
T ss_pred HHHHHHhhCC-CEEEEEHHHHHHHHHHHHHhhhhhhcccCCCeEEEEEEccCCCH-HHHHHHHHcCC-cE----EEeCHH
Confidence 4455666663 33344332 134556666554 45554444333311 11121222443 22 223344
Q ss_pred HHHHHHhCCC---eEEEeeC-CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 147 LVRTFHGRNK---RVFAWTV-DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 147 ~v~~~~~~g~---~v~~wtv-~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
=+..+++.|+ ++.+... .++++++.+++.|+..+..|.+..+.++-+
T Consensus 94 E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~~~~i~~~~vds~~el~~l~~ 144 (434)
T 1twi_A 94 ELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINE 144 (434)
T ss_dssp HHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCSEEEECSHHHHHHHHH
T ss_pred HHHHHHHCCCCCCcEEEECCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHH
Confidence 4566677786 4666665 467889999999987888899888776543
No 288
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=34.02 E-value=99 Score=20.22 Aligned_cols=50 Identities=10% Similarity=0.179 Sum_probs=34.1
Q ss_pred HHHHHHHh--CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHG--RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~--~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++ .+.++.+.|.. +.+....+++.|+++++.- .+..+...++..
T Consensus 84 ~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~ 138 (146)
T 4dad_A 84 AAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRA 138 (146)
T ss_dssp HHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHH
Confidence 34555544 36778887764 5677888999999998876 455666555543
No 289
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=33.83 E-value=1.8e+02 Score=26.10 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=38.3
Q ss_pred hhcCceEeecccc-----cCHHHHHHHHhCCC---eEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 130 IRKAGVVGVYHPL-----IDEKLVRTFHGRNK---RVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 130 ~~~~~~~~~~~~~-----~~~~~v~~~~~~g~---~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
..+++++.+.... .-+++++.++++|. +|.+=++--..++..+.+.|+|+++++-
T Consensus 645 e~~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG~~p~~d~~~l~~~GaD~~f~~g 707 (727)
T 1req_A 645 EADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEIYTPG 707 (727)
T ss_dssp HTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHTTEEEEECTT
T ss_pred HcCCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcCCCccccHHHHHhCCCCEEEcCC
Confidence 4677776543221 12677888999887 5666654455577888999999999963
No 290
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=33.68 E-value=60 Score=27.75 Aligned_cols=40 Identities=15% Similarity=0.104 Sum_probs=32.5
Q ss_pred cCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 143 IDEKLVRTFHG-RNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 143 ~~~~~v~~~~~-~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
++.+.++.+++ -+++|.+=.+.+.++++.+.+.|+|+|+.
T Consensus 330 ~~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 330 LTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp CCHHHHHHHHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEE
Confidence 34566888876 58898876667789999999999999977
No 291
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=33.35 E-value=97 Score=19.92 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=34.9
Q ss_pred HHHHHHHhC---CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHGR---NKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~---g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++. +.++.+.|.. +.+....+++.|++++++- .+..+.+.+++.
T Consensus 69 ~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 124 (136)
T 3hdv_A 69 DLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKE 124 (136)
T ss_dssp HHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHHHHHHH
Confidence 556666654 4678888764 5677888999999999886 555555555543
No 292
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=33.15 E-value=91 Score=27.40 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=42.7
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcC-ChHHHHHHHHHHHh
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTS-NPILFQRVMQDIRT 197 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD-~P~~~~~~~~~~~~ 197 (208)
++.++.++++|+++.+=|.++....+... ++|++.+..+ .|+.-.+.+++++.
T Consensus 463 ~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~ 517 (645)
T 3j08_A 463 KPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQA 517 (645)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCCHHhHHHHHHHHhh
Confidence 57899999999999999999887776654 6899999888 57777777776644
No 293
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=33.03 E-value=1.5e+02 Score=22.01 Aligned_cols=62 Identities=18% Similarity=0.087 Sum_probs=44.4
Q ss_pred hhhcCceEeeccc----ccCHHHHHHHHhC---CCeEEEe-eCCCHHHHHHHHhCCCCEEEcCChHHHHH
Q 028497 129 RIRKAGVVGVYHP----LIDEKLVRTFHGR---NKRVFAW-TVDDEDSMRKMLHERVDAVVTSNPILFQR 190 (208)
Q Consensus 129 ~~~~~~~~~~~~~----~~~~~~v~~~~~~---g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD~P~~~~~ 190 (208)
...|++++..... -.+.+.++.+++. .++|..- ++.+.+++.+++..|++.|=+-.+..+.+
T Consensus 142 ~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~~~i~~ 211 (225)
T 1mzh_A 142 IEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSGISIAE 211 (225)
T ss_dssp HHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCHHHHHH
T ss_pred HHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHccHHHHHH
Confidence 3478998865442 2356677766653 6888665 57899999999999999888777655444
No 294
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=32.89 E-value=68 Score=26.36 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=31.5
Q ss_pred CHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 144 DEKLVRTFHG-RNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 144 ~~~~v~~~~~-~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+.+.++.+++ -+++|.+=.+.+.++++.+.+.|+|+|+..
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs 280 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVS 280 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeC
Confidence 4556777776 478888766678999999999999999874
No 295
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=32.87 E-value=68 Score=26.12 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=29.4
Q ss_pred HHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCC
Q 028497 149 RTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 149 ~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~ 184 (208)
+..+..+++|.+=++.+.++++.+.+.|+|+|+.-.
T Consensus 205 ~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 205 EFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp HHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEESC
T ss_pred HHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEECC
Confidence 334557899988778899999999999999997743
No 296
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=32.64 E-value=1.9e+02 Score=23.05 Aligned_cols=98 Identities=10% Similarity=0.020 Sum_probs=61.2
Q ss_pred HHHHHHHhhccCCeEEEEEEecCC-----Cc-hhhhHh---hhhcCceEeeccc-----------ccCHHHHHHHHh-CC
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPS-----TG-FRTNLL---RIRKAGVVGVYHP-----------LIDEKLVRTFHG-RN 155 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~-----~~-~~~~~~---~~~~~~~~~~~~~-----------~~~~~~v~~~~~-~g 155 (208)
++++.+|+.. +.++++=++.... .. ....++ ...|++++++... ....++++.+++ -+
T Consensus 199 eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~ 277 (340)
T 3gr7_A 199 EVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD 277 (340)
T ss_dssp HHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC
Confidence 4567777766 7788765542210 00 111222 3368888876421 123455666654 57
Q ss_pred CeEEEe-eCCCHHHHHHHHhCC-CCEEEcC-----ChHHHHHHHHHH
Q 028497 156 KRVFAW-TVDDEDSMRKMLHER-VDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 156 ~~v~~w-tv~~~~~~~~~~~~g-vd~i~TD-----~P~~~~~~~~~~ 195 (208)
++|.+- .+++.++++++++.| +|+|.-- +|....++...+
T Consensus 278 iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l 324 (340)
T 3gr7_A 278 IPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAREL 324 (340)
T ss_dssp CCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHT
T ss_pred CcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHC
Confidence 888765 468999999999998 9999876 566666666544
No 297
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=32.45 E-value=1.5e+02 Score=21.93 Aligned_cols=120 Identities=8% Similarity=-0.059 Sum_probs=58.0
Q ss_pred ceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEee-CHHHHHHHHh----hc-cCCeEEEEEEecCCCchhhhHhh
Q 028497 56 RKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAK-SDNLVRDIMR----LS-SNVTAGYIIMVDPSTGFRTNLLR 129 (208)
Q Consensus 56 ~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf-~~~~l~~l~~----~~-p~~~~~~l~~~~~~~~~~~~~~~ 129 (208)
..+++|+|.-.. ...+.+.+.+.|..-..+-.+ ..+.++.+++ .. +...+|..............+.+
T Consensus 59 ~~iflDlKl~Di------p~t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~ 132 (221)
T 3exr_A 59 KIIVADTKCADA------GGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLD 132 (221)
T ss_dssp SEEEEEEEECSC------HHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHH
T ss_pred CcEEEEEEeecc------HHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHc
Confidence 478999998632 233444566777644445333 4444444333 22 22455554432111101112212
Q ss_pred hhcCceEeecc-------c-ccCHHHHHH---HHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 130 IRKAGVVGVYH-------P-LIDEKLVRT---FHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 130 ~~~~~~~~~~~-------~-~~~~~~v~~---~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.+.+.+..+. . ..++.-++. ....+..+.+=+.=+++..+.+.+.|+|.++.
T Consensus 133 -~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~~aGad~~Vv 195 (221)
T 3exr_A 133 -AGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGLSVDTLKLFEGVDVFTFIA 195 (221)
T ss_dssp -TTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTCCCSEEEE
T ss_pred -CCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHCCCCEEEE
Confidence 3444333221 1 223433333 33445665544333555677888999999874
No 298
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=32.42 E-value=90 Score=23.23 Aligned_cols=47 Identities=9% Similarity=0.109 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC-----ChHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS-----NPILFQRV 191 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD-----~P~~~~~~ 191 (208)
.+.++.++..++++.+- .+++.+++..+++.|+|+|+.. +|+.+.++
T Consensus 63 ~~~i~~i~~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 63 LPVLEKLSEFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL 115 (241)
T ss_dssp HHHHHHGGGGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH
Confidence 44555544447787765 4688889999999999998875 45555555
No 299
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=32.37 E-value=56 Score=27.80 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCCeEEEeeCC--------------CHHHHHHHHhCCCCEEEcCC
Q 028497 145 EKLVRTFHGRNKRVFAWTVD--------------DEDSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~--------------~~~~~~~~~~~gvd~i~TD~ 184 (208)
+.+++++|+.|+++.+|.-- ...+++.+.+.|||+|=-|.
T Consensus 97 k~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~fa~WGVDylK~D~ 150 (479)
T 3lrk_A 97 GHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQFFANNRVDYLKYDN 150 (479)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHHHHHhCCcEEEEcc
Confidence 67899999999999999632 24678888999999998874
No 300
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=32.34 E-value=38 Score=26.84 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=33.4
Q ss_pred HHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
..++.+++. +.++-+ -+++.++.+++++.|+|+|.-| .|+.+++.++..
T Consensus 198 ~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn~~~~~l~~av~~i 250 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDNFTLDMMRDAVRVT 250 (298)
T ss_dssp HHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 345555543 233322 2678889999999999999999 567777776644
No 301
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=32.07 E-value=2.2e+02 Score=23.58 Aligned_cols=90 Identities=7% Similarity=0.093 Sum_probs=49.3
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCC--eEEEee--CCCHHHHHHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNK--RVFAWT--VDDEDSMRKM 172 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~--~v~~wt--v~~~~~~~~~ 172 (208)
+.++.+++..|+.++.+....++.... .......|. . ....+..=+..+++.|+ ...+|+ ..++++++.+
T Consensus 50 ~n~~~~~~~~~~~~i~yavKAn~~~~v-~~~l~~~G~-g----~~vaS~~E~~~~~~aG~~~~~iv~~g~~k~~~ei~~a 123 (448)
T 3btn_A 50 KKHSQWQTVVAQIKPFYTVKCNSTPAV-LEILAALGT-G----FACSSKNEMALVQELGVSPENIIFTSPCKQVSQIKYA 123 (448)
T ss_dssp HHHHHHHHHCTTEEEEEEGGGCCCHHH-HHHHHHHTC-E----EEESSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEeeeCCCHHH-HHHHHHcCC-c----EEEeCHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHH
Confidence 345667776776555544433331111 111122332 1 22234444566667777 334554 2467788888
Q ss_pred HhCCCCEEEcCChHHHHHHH
Q 028497 173 LHERVDAVVTSNPILFQRVM 192 (208)
Q Consensus 173 ~~~gvd~i~TD~P~~~~~~~ 192 (208)
++.|+..+..|..+++..+-
T Consensus 124 ~~~gv~~~~vds~~el~~l~ 143 (448)
T 3btn_A 124 AKVGVNIMTCDNEIELKKIA 143 (448)
T ss_dssp HHHTCCEEEECSHHHHHHHH
T ss_pred HHcCCCEEEeCCHHHHHHHH
Confidence 88888777788887777654
No 302
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=31.59 E-value=90 Score=26.31 Aligned_cols=58 Identities=10% Similarity=0.106 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcC---ChHHHHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTS---NPILFQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD---~P~~~~~~~~~~~~~~~~~~~ 204 (208)
++-+.++++|.++.+-..+..+.+.+++ +.|++.|.+| -|... +.-+..+..|.+.|.
T Consensus 69 ~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~~~~~-~rd~~v~~~l~~~gi 130 (489)
T 1np7_A 69 NLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEEL-DVERNLVKQLTILGI 130 (489)
T ss_dssp HHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEEEEEEECCCSHHHH-HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCCEEEEecccCHHHH-HHHHHHHHHHHhcCC
Confidence 4456688899999988776677777776 5799999999 55442 233344555655553
No 303
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=31.53 E-value=1.2e+02 Score=25.02 Aligned_cols=36 Identities=3% Similarity=-0.068 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
-.++.++..|..+.+-+ .+++..+.+.++|++.++.
T Consensus 244 ~avqlak~~Ga~vi~~~-~~~~~~~~~~~lGa~~vi~ 279 (456)
T 3krt_A 244 YATQFALAGGANPICVV-SSPQKAEICRAMGAEAIID 279 (456)
T ss_dssp HHHHHHHHTTCEEEEEE-SSHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCeEEEEE-CCHHHHHHHHhhCCcEEEe
Confidence 45788899999887655 5777888888999998874
No 304
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.51 E-value=1.5e+02 Score=21.71 Aligned_cols=57 Identities=11% Similarity=0.080 Sum_probs=36.3
Q ss_pred hHhhhhcCceEeecccccCHHHHHHHHhCCCeEE-EeeCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 126 NLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVF-AWTVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~-~wtv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
++.+..+.+++..|... +++.++.++ +|++++ +..+.+..++ .+....+|++..|-+
T Consensus 69 ~~~~~~~ld~vQLHG~e-~~~~~~~l~-~~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~ 126 (203)
T 1v5x_A 69 RLMEEARLQVAQLHGEE-PPEWAEAVG-RFYPVIKAFPLEGPARP-EWADYPAQALLLDGK 126 (203)
T ss_dssp HHHHHTTCSEEEECSCC-CHHHHHHHT-TTSCEEEEEECSSSCCG-GGGGSSCSEEEEECS
T ss_pred HHHHhhCCCEEEECCCC-CHHHHHHhc-cCCCEEEEEEcCChHhh-hhhhcCCCEEEEcCC
Confidence 44455788888776543 778888773 366654 4556555444 444445899988853
No 305
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=31.43 E-value=75 Score=24.41 Aligned_cols=47 Identities=11% Similarity=0.026 Sum_probs=34.0
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHH-HHHHhCCCCEEEcC-ChHHHHHHHH
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSM-RKMLHERVDAVVTS-NPILFQRVMQ 193 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~-~~~~~~gvd~i~TD-~P~~~~~~~~ 193 (208)
.++..++.+|+++.+.+. +++.. ..++++|++.+... +-..+.+..+
T Consensus 199 ~iv~aa~aaG~~~g~~~~-~~~~~~~~~~~~G~~~~s~~~D~~~l~~~~~ 247 (261)
T 3qz6_A 199 KVYRAADRQGVVKGFFTA-ADAAKMGWAVERGAQMLLWSGDVAALQTYTA 247 (261)
T ss_dssp HHHHHHHHHTCEEEEEES-SCGGGGHHHHHTTCCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeC-CHHHHHHHHHHCCCCEEEEhhHHHHHHHHHH
Confidence 457778999999998875 55566 88999999998765 3334444443
No 306
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=31.10 E-value=1.4e+02 Score=22.35 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=15.0
Q ss_pred HHHHhCCCeEEEeeCC-CH----HHHHHHHhCCCCEEEc
Q 028497 149 RTFHGRNKRVFAWTVD-DE----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 149 ~~~~~~g~~v~~wtv~-~~----~~~~~~~~~gvd~i~T 182 (208)
+.++++|+.+.+...+ +. ..++.+...+||||+.
T Consensus 40 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi 78 (289)
T 2fep_A 40 DIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVF 78 (289)
T ss_dssp HHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 3445555555443322 22 1233444555665553
No 307
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=30.86 E-value=2.1e+02 Score=23.15 Aligned_cols=110 Identities=7% Similarity=0.045 Sum_probs=63.3
Q ss_pred HHHHHHhcCCcceEEEeeC--HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhC
Q 028497 77 ILSVIERTKCYNCLVWAKS--DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGR 154 (208)
Q Consensus 77 v~~~l~~~~~~~~ii~Sf~--~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 154 (208)
+.+++++++. ...+++.+ .+.++.+++..|+.++.+....++.... .......|+ .+ ...+..=...+++.
T Consensus 25 ~~~l~~~~~t-P~~vidl~~l~~N~~~l~~~~~~~~l~~vvKan~~~~v-~~~l~~~G~-~~----~vas~~E~~~~~~~ 97 (420)
T 2p3e_A 25 LKELAQTFGT-PLYVYSSNFIKERFEAYRKAFPDALICYAVKANFNPHL-VKLLGELGA-GA----DIVSGGELYLAKKA 97 (420)
T ss_dssp HHHHHHHHCS-SEEEEEHHHHHHHHHHHHHHSTTSEEEEEGGGCCCHHH-HHHHHHTTC-EE----EESSHHHHHHHHHT
T ss_pred HHHHHHhhCC-CEEEEEHHHHHHHHHHHHHhCCcCeEEEEEecCCCHHH-HHHHHHcCC-eE----EEeCHHHHHHHHHc
Confidence 3445666663 33333332 2356677777777766555443331111 111222454 22 22344445666778
Q ss_pred CC---eEEEeeC-CCHHHHHHHHhCCCCEEEcCChHHHHHHHH
Q 028497 155 NK---RVFAWTV-DDEDSMRKMLHERVDAVVTSNPILFQRVMQ 193 (208)
Q Consensus 155 g~---~v~~wtv-~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~ 193 (208)
|+ .+.+... -++++++.+++.|+..+..|.++.+.++-+
T Consensus 98 G~~~~~Il~~g~~~~~~~l~~a~~~~i~~~~vds~~~l~~l~~ 140 (420)
T 2p3e_A 98 GIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNE 140 (420)
T ss_dssp TCCGGGEEECSSCCCHHHHHHHHHTTCSEEEECCHHHHHHHHH
T ss_pred CCChhHEEEeCCCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHH
Confidence 88 3555554 468899999999998788888888876644
No 308
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=30.72 E-value=1.1e+02 Score=19.72 Aligned_cols=48 Identities=6% Similarity=0.090 Sum_probs=31.4
Q ss_pred HHHHHHHh-C-CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC---ChHHHHHHHH
Q 028497 146 KLVRTFHG-R-NKRVFAWTVD-DEDSMRKMLHERVDAVVTS---NPILFQRVMQ 193 (208)
Q Consensus 146 ~~v~~~~~-~-g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD---~P~~~~~~~~ 193 (208)
++++.+++ . +.++.+.+.. +......+++.|++++++- .+..+...++
T Consensus 75 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~ 128 (137)
T 2pln_A 75 SFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIE 128 (137)
T ss_dssp HHHHHHHHHSTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHH
T ss_pred HHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHH
Confidence 34444444 3 7888887764 5677888999999998875 3344444444
No 309
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=30.68 E-value=1.6e+02 Score=21.75 Aligned_cols=58 Identities=16% Similarity=0.081 Sum_probs=37.6
Q ss_pred HHHHHHHhCCCeEEEeeCC-CH----HHHHHHHhC---CCCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 146 KLVRTFHGRNKRVFAWTVD-DE----DSMRKMLHE---RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~-~~----~~~~~~~~~---gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
.+.+.++++|+.+.+...+ +. ..++.+++. .+++|++-+-..+..+++..+ +.|..+|
T Consensus 139 gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~d~~a~g~~~al~----~~g~~vP 204 (277)
T 3cs3_A 139 VSTRELTRFGIPYEIIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFNDEMAIGVYKYVA----ETNYQMG 204 (277)
T ss_dssp HHHHHHHHTTCCEEEEECCSSHHHHHHHHHHHTTSCCCSSEEEEESSHHHHHHHHHHHT----TSSCCBT
T ss_pred HHHHHHHHcCCCeeEEeCCCChhHHHHHHHHHHhcCCCCCcEEEEcChHHHHHHHHHHH----HcCCCCC
Confidence 3566778899876532222 32 235666665 589999988887777776555 5566555
No 310
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=30.61 E-value=92 Score=23.35 Aligned_cols=134 Identities=12% Similarity=0.132 Sum_probs=69.0
Q ss_pred ceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEe-e-C--HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhh-
Q 028497 56 RKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWA-K-S--DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRI- 130 (208)
Q Consensus 56 ~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~S-f-~--~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~- 130 (208)
..+.+.++..++ ..+ ++...+.|..-..+-. . + .+.++.+++ .+++.|+... |.+.. ..+...
T Consensus 65 ~~~dvhLmv~~p---~~~----i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~--~G~k~gval~--p~t~~-e~l~~~l 132 (228)
T 3ovp_A 65 PFFDMHMMVSKP---EQW----VKPMAVAGANQYTFHLEATENPGALIKDIRE--NGMKVGLAIK--PGTSV-EYLAPWA 132 (228)
T ss_dssp SCEEEEEECSCG---GGG----HHHHHHHTCSEEEEEGGGCSCHHHHHHHHHH--TTCEEEEEEC--TTSCG-GGTGGGG
T ss_pred CcEEEEEEeCCH---HHH----HHHHHHcCCCEEEEccCCchhHHHHHHHHHH--cCCCEEEEEc--CCCCH-HHHHHHh
Confidence 356666665432 122 2334455654344421 1 1 135666665 3677877664 33321 121111
Q ss_pred hcCceEee---cc-----ccc--CHHHHHHHHhCC--CeEEEeeCCCHHHHHHHHhCCCCEEEc-------CChHHHHHH
Q 028497 131 RKAGVVGV---YH-----PLI--DEKLVRTFHGRN--KRVFAWTVDDEDSMRKMLHERVDAVVT-------SNPILFQRV 191 (208)
Q Consensus 131 ~~~~~~~~---~~-----~~~--~~~~v~~~~~~g--~~v~~wtv~~~~~~~~~~~~gvd~i~T-------D~P~~~~~~ 191 (208)
...+++.+ +. .+. ..+.++.+++.+ ..+.+=+.=+++.+..+.+.|+|+++. ++|....+.
T Consensus 133 ~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~ 212 (228)
T 3ovp_A 133 NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINL 212 (228)
T ss_dssp GGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHH
T ss_pred ccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHH
Confidence 12454421 11 121 123467777654 556555444578899999999999874 467766666
Q ss_pred HHHHHhhhhh
Q 028497 192 MQDIRTQCLE 201 (208)
Q Consensus 192 ~~~~~~~~~~ 201 (208)
+++...++..
T Consensus 213 l~~~~~~~~~ 222 (228)
T 3ovp_A 213 LRNVCSEAAQ 222 (228)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6554444443
No 311
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=30.46 E-value=1.8e+02 Score=23.82 Aligned_cols=91 Identities=15% Similarity=0.049 Sum_probs=52.5
Q ss_pred CHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec-c-c------ccCHHHHHHHHh---CCCeEEEe-e
Q 028497 95 SDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY-H-P------LIDEKLVRTFHG---RNKRVFAW-T 162 (208)
Q Consensus 95 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-~------~~~~~~v~~~~~---~g~~v~~w-t 162 (208)
..+.++++++.. +.|+.+--...+ .........|++++.+. + . ..+.+.+..+++ .+++|.+- +
T Consensus 240 ~~~~i~~lr~~~-~~PvivKgv~~~---e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GG 315 (392)
T 2nzl_A 240 SWEDIKWLRRLT-SLPIVAKGILRG---DDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGG 315 (392)
T ss_dssp CHHHHHHHC--C-CSCEEEEEECCH---HHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSS
T ss_pred HHHHHHHHHHhh-CCCEEEEecCCH---HHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECC
Confidence 445667777654 456543211111 11122234788887652 1 1 112234444433 25787765 5
Q ss_pred CCCHHHHHHHHhCCCCEEEcCChHHHH
Q 028497 163 VDDEDSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 163 v~~~~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
+.+..++.+++.+|+|+|..-.|-...
T Consensus 316 I~~g~Dv~kalalGAd~V~iGr~~l~~ 342 (392)
T 2nzl_A 316 VRKGTDVLKALALGAKAVFVGRPIVWG 342 (392)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CCCHHHHHHHHHhCCCeeEECHHHHHH
Confidence 789999999999999999999886543
No 312
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=30.40 E-value=1.1e+02 Score=22.45 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=14.9
Q ss_pred HHHHHHhCCCeEEEee-CC--CHHHHHHHHhCCCCEEE
Q 028497 147 LVRTFHGRNKRVFAWT-VD--DEDSMRKMLHERVDAVV 181 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wt-v~--~~~~~~~~~~~gvd~i~ 181 (208)
.++.+...+..-.+.. .+ +...++.+.+.|+-.|+
T Consensus 50 ~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~ 87 (272)
T 3o74_A 50 LQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIA 87 (272)
T ss_dssp HHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEE
Confidence 3445555555443332 22 13344445444444433
No 313
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=30.35 E-value=66 Score=24.05 Aligned_cols=38 Identities=21% Similarity=0.356 Sum_probs=29.4
Q ss_pred HHHHHHHh-CCCeEEE-eeCCCHHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHG-RNKRVFA-WTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~-~g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
+.++.+++ .++++.+ -++++.+.+.++++.|+|+++.-
T Consensus 181 ~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 181 DLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp HHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEc
Confidence 35666655 3688765 56888899999999999998865
No 314
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=30.26 E-value=1.3e+02 Score=22.57 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=34.6
Q ss_pred hcCceEeecccccCHHHHHHHHhCCCeEEEee------------CCCH----HHHHHHHhCCCC--EEEcCChHH--HHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWT------------VDDE----DSMRKMLHERVD--AVVTSNPIL--FQR 190 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wt------------v~~~----~~~~~~~~~gvd--~i~TD~P~~--~~~ 190 (208)
.+++.+.+.....+...++.+++.|+++.+.. .|+. ...+++++.|.. ++++..+.. ..+
T Consensus 65 ~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~ 144 (288)
T 3gv0_A 65 GSADGVIISKIEPNDPRVRFMTERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDH 144 (288)
T ss_dssp TCCSEEEEESCCTTCHHHHHHHHTTCCEEEESCCCSSCCCEEEEECHHHHHHHHHHHHHHTTCCEEEEECCCTTSHHHHH
T ss_pred CCccEEEEecCCCCcHHHHHHhhCCCCEEEECCcCCCCCCcEEEeCcHHHHHHHHHHHHHCCCCeEEEEcCCcccchHHH
Confidence 34444433222223345566666666665432 1221 245666777754 345444322 122
Q ss_pred HHHHHHhhhhhcCc
Q 028497 191 VMQDIRTQCLEEGF 204 (208)
Q Consensus 191 ~~~~~~~~~~~~~~ 204 (208)
-.+.++..+.+.|.
T Consensus 145 R~~gf~~~l~~~g~ 158 (288)
T 3gv0_A 145 ARKGFNRGIRDFGL 158 (288)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 22334555556554
No 315
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=30.25 E-value=2.1e+02 Score=22.93 Aligned_cols=99 Identities=9% Similarity=0.013 Sum_probs=59.4
Q ss_pred HHHHHHHhhcc-CCeEEEEEEecCC-C-c--hhh---hHh---hhhcCceEeeccc------------ccCHHHHHHHHh
Q 028497 97 NLVRDIMRLSS-NVTAGYIIMVDPS-T-G--FRT---NLL---RIRKAGVVGVYHP------------LIDEKLVRTFHG 153 (208)
Q Consensus 97 ~~l~~l~~~~p-~~~~~~l~~~~~~-~-~--~~~---~~~---~~~~~~~~~~~~~------------~~~~~~v~~~~~ 153 (208)
++++.+|+..+ +.++++=++.... . . ... .++ ...|++++.+... ....++++.+++
T Consensus 213 eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~ 292 (363)
T 3l5l_A 213 ETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRR 292 (363)
T ss_dssp HHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHH
Confidence 46777777654 6778765542211 0 1 111 122 2367888765321 123345555544
Q ss_pred -CCCeEEEe-eCCCHHHHHHHHhCC-CCEEEcC-----ChHHHHHHHHHH
Q 028497 154 -RNKRVFAW-TVDDEDSMRKMLHER-VDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 154 -~g~~v~~w-tv~~~~~~~~~~~~g-vd~i~TD-----~P~~~~~~~~~~ 195 (208)
.+++|.+- .+.+.++++++++.| +|+|.-- +|+...++.+++
T Consensus 293 ~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l 342 (363)
T 3l5l_A 293 EAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKEL 342 (363)
T ss_dssp HHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHT
T ss_pred HcCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHc
Confidence 36777665 467899999999998 9998765 567777766654
No 316
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=29.97 E-value=1.2e+02 Score=25.00 Aligned_cols=50 Identities=8% Similarity=0.233 Sum_probs=36.9
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHh---------CCCCEEEc---CChHHHHHHHHHH
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLH---------ERVDAVVT---SNPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~---------~gvd~i~T---D~P~~~~~~~~~~ 195 (208)
++++.++++|+++.+=|-++...++..++ .+...+.. +.|+.+.++++++
T Consensus 263 e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~~~~KPKp~~l~~al~~L 324 (387)
T 3nvb_A 263 EWVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFVANWENKADNIRTIQRTL 324 (387)
T ss_dssp HHHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEEEESSCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCccCccEEEeCCCCcHHHHHHHHHHh
Confidence 46889999999999999999888888774 24443332 3667777777765
No 317
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=29.97 E-value=1.1e+02 Score=19.64 Aligned_cols=50 Identities=14% Similarity=0.274 Sum_probs=34.5
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++ .+.++.+.+.. +......+++.|++++++- .+..+.+.++..
T Consensus 71 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~ 127 (143)
T 3cnb_A 71 SICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQL 127 (143)
T ss_dssp HHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHH
Confidence 45566655 46778777754 5667788899999999875 456666665543
No 318
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=29.96 E-value=97 Score=24.44 Aligned_cols=59 Identities=10% Similarity=0.114 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCeEEEe-e--------CCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHHHhhhhhcC
Q 028497 145 EKLVRTFHGRNKRVFAW-T--------VDDEDSMRKMLHERVDAVVTSNPILFQRVMQDIRTQCLEEG 203 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~w-t--------v~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~~~~~~~ 203 (208)
.+.++.++.+|--...= - ..+.+.+..+.+.|.+||...+|..-.+..+....-|.+.|
T Consensus 186 ~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~~~~~~~~~lA~~~g 253 (301)
T 3o0f_A 186 HEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPPEQRERLLTIAARHD 253 (301)
T ss_dssp HHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 47789999888655431 1 23567888999999999998776654444444444444554
No 319
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=29.91 E-value=32 Score=26.65 Aligned_cols=35 Identities=6% Similarity=0.053 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCCeEEEeeCCC-----HHHHHHHHhCCCCE
Q 028497 145 EKLVRTFHGRNKRVFAWTVDD-----EDSMRKMLHERVDA 179 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~-----~~~~~~~~~~gvd~ 179 (208)
.++++.++++|+++++-|-++ ......+.++|+..
T Consensus 107 ~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~ 146 (260)
T 3pct_A 107 VEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTG 146 (260)
T ss_dssp HHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCc
Confidence 467888889999988888653 24556677778764
No 320
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=29.82 E-value=1.7e+02 Score=21.63 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=70.8
Q ss_pred CCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEee---CHHHHHHHHhhcc-CCeEEEEEE
Q 028497 41 ITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAK---SDNLVRDIMRLSS-NVTAGYIIM 116 (208)
Q Consensus 41 iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf---~~~~l~~l~~~~p-~~~~~~l~~ 116 (208)
-+++ +.+..++.. ..+-+.++..-. . .+.+..+ .+.|....++.+. +++.+.++.+..+ .+.+++-..
T Consensus 61 ~~~~-~~i~~i~~~-~~ipv~v~ggI~----~-~~~~~~~-l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~ 132 (244)
T 1vzw_A 61 GDNR-ALIAEVAQA-MDIKVELSGGIR----D-DDTLAAA-LATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVR 132 (244)
T ss_dssp CCCH-HHHHHHHHH-CSSEEEEESSCC----S-HHHHHHH-HHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEE
T ss_pred CChH-HHHHHHHHh-cCCcEEEECCcC----C-HHHHHHH-HHcCCCEEEECchHhhCHHHHHHHHHHcCCcEEEEEEcc
Confidence 3566 777777653 233445554321 1 1233333 3457554555442 5555666555443 233333322
Q ss_pred -----ecCCC---chhhhHh---hhhcCceEeecc-------cccCHHHHHHHHh-CCCeEEEe-eCCCHHHHHHHHhC-
Q 028497 117 -----VDPST---GFRTNLL---RIRKAGVVGVYH-------PLIDEKLVRTFHG-RNKRVFAW-TVDDEDSMRKMLHE- 175 (208)
Q Consensus 117 -----~~~~~---~~~~~~~---~~~~~~~~~~~~-------~~~~~~~v~~~~~-~g~~v~~w-tv~~~~~~~~~~~~- 175 (208)
..-|. ....++. ...|++.+.+.. .-.+.+.++.+.+ .++++.+- ++++.+++.++++.
T Consensus 133 ~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~ 212 (244)
T 1vzw_A 133 GTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLV 212 (244)
T ss_dssp TTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTG
T ss_pred CCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhc
Confidence 01010 0111221 236676543321 1245667777654 47888775 57888999999999
Q ss_pred --CCCEEEcC
Q 028497 176 --RVDAVVTS 183 (208)
Q Consensus 176 --gvd~i~TD 183 (208)
|+++++.=
T Consensus 213 ~~Gadgv~vG 222 (244)
T 1vzw_A 213 PAGVEGAIVG 222 (244)
T ss_dssp GGTEEEEEEC
T ss_pred cCCCceeeee
Confidence 99998754
No 321
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=29.80 E-value=1.9e+02 Score=22.29 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=39.1
Q ss_pred HHHHHHHhCCCeEEEe-eCCCH----HHHHHHHhCC-CCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 146 KLVRTFHGRNKRVFAW-TVDDE----DSMRKMLHER-VDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~w-tv~~~----~~~~~~~~~g-vd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
.+.+.++++|+..... +-.+. ..++.+++.+ +++|++-+-..+..+++..+ +.|..+|+
T Consensus 195 Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ai~~~nd~~A~g~~~al~----~~G~~vP~ 259 (333)
T 3jvd_A 195 GISHAASIYGAEVTFHFGHYSVESGEEMAQVVFNNGLPDALIVASPRLMAGVMRAFT----RLNVRVPH 259 (333)
T ss_dssp HHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHTCCCSEEEECCHHHHHHHHHHHH----HTTCCTTT
T ss_pred HHHHHHHHCCCCEEEecCCCCHHHHHHHHHHHhcCCCCcEEEECCHHHHHHHHHHHH----HcCCCCCC
Confidence 4567788999982222 22232 3456666655 89999998888887777555 66776663
No 322
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=29.74 E-value=1.7e+02 Score=21.51 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=32.8
Q ss_pred hcCceEeec------ccc--cCHHHHHHHHhC-CCeEEE-eeCCCHH-HHHHHHhCCCCEEE
Q 028497 131 RKAGVVGVY------HPL--IDEKLVRTFHGR-NKRVFA-WTVDDED-SMRKMLHERVDAVV 181 (208)
Q Consensus 131 ~~~~~~~~~------~~~--~~~~~v~~~~~~-g~~v~~-wtv~~~~-~~~~~~~~gvd~i~ 181 (208)
.|++++.+. .+. ...+.++.+++. +.++.+ -.+|+++ .++.+.+.|+|+|+
T Consensus 35 ~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~ 96 (230)
T 1rpx_A 35 AGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVS 96 (230)
T ss_dssp TTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEE
Confidence 577766542 111 236788888775 554433 2456654 68888899999996
No 323
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=29.58 E-value=85 Score=23.52 Aligned_cols=40 Identities=13% Similarity=0.333 Sum_probs=25.1
Q ss_pred HHHHHHHHhCCCe-EEEeeCC-CHH----HHHHHHhCCCCEEEcCC
Q 028497 145 EKLVRTFHGRNKR-VFAWTVD-DED----SMRKMLHERVDAVVTSN 184 (208)
Q Consensus 145 ~~~v~~~~~~g~~-v~~wtv~-~~~----~~~~~~~~gvd~i~TD~ 184 (208)
..+-+.+.++|+. +.+...+ +.+ .++.+...++|||+.--
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 75 (277)
T 3hs3_A 30 DGIQEVIQKEGYTALISFSTNSDVKKYQNAIINFENNNVDGIITSA 75 (277)
T ss_dssp HHHHHHHHHTTCEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcc
Confidence 3445667788888 6665443 322 35566778888888643
No 324
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=29.45 E-value=1.2e+02 Score=19.77 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=33.8
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++ .+.++.+.|.. +......+++.|++++++- .+..+...++.
T Consensus 69 ~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~ 124 (147)
T 2zay_A 69 DLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKR 124 (147)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHH
Confidence 45566654 56788887764 5667788899999999876 45555555543
No 325
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=29.28 E-value=91 Score=23.06 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=41.8
Q ss_pred hcCceEeecccccCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQDI 195 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~ 195 (208)
..+|.+-........+..+.+.+.|++|++...++.+++...+.. =|-+++.++.+.++++++
T Consensus 56 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~--lg~~lg~~~~A~~~~~~~ 118 (245)
T 1n2z_A 56 LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQ--LAPWSPQPDKAEQAAQSL 118 (245)
T ss_dssp TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHH--HGGGCSCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHH--HHHHhCCHHHHHHHHHHH
Confidence 778876554333457788999999999988766665555444432 122466788888777654
No 326
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=29.11 E-value=69 Score=25.42 Aligned_cols=39 Identities=10% Similarity=-0.044 Sum_probs=30.9
Q ss_pred HHHHHHHHhCCCeEEEeeC---CCHHHHHHHHhCCCCEEEcC
Q 028497 145 EKLVRTFHGRNKRVFAWTV---DDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv---~~~~~~~~~~~~gvd~i~TD 183 (208)
.+.++.+++.+++|.+=.+ .+.++++.+.+.|+|+|+..
T Consensus 171 ~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs 212 (332)
T 1vcf_A 171 VERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVA 212 (332)
T ss_dssp HHHHHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeC
Confidence 4667777777788877545 67889999999999999764
No 327
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae}
Probab=29.09 E-value=39 Score=27.47 Aligned_cols=44 Identities=16% Similarity=0.386 Sum_probs=28.3
Q ss_pred HHHHHhCCCeEEEeeCCC----HHHHHHHHhCCCCEEEcCChHHHHHHH
Q 028497 148 VRTFHGRNKRVFAWTVDD----EDSMRKMLHERVDAVVTSNPILFQRVM 192 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv~~----~~~~~~~~~~gvd~i~TD~P~~~~~~~ 192 (208)
+..+++.|..+|.=.+.. ..+++++.+.|++|++|| |..+.+.+
T Consensus 5 l~~l~~~g~s~WlD~l~r~~ldtgdl~~~~~~g~~GvTTN-Psl~~kA~ 52 (352)
T 3clm_A 5 LSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSN-PAIFQKAF 52 (352)
T ss_dssp HHHHHHTTEEEEESCCCHHHHHTSHHHHHHTTTCCCEECC-HHHHHHHH
T ss_pred HHHHHHCCCeEecCCCchhhccccCHHHHHhcCCCeEecC-HHHHHHHH
Confidence 455677774433323321 237778889999999997 56666654
No 328
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=28.95 E-value=1.4e+02 Score=27.77 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=44.8
Q ss_pred HHHHHHHhC--CCeEEEe-eCCCHHHHHHHHhCCCCEEEc------CChHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGR--NKRVFAW-TVDDEDSMRKMLHERVDAVVT------SNPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~w-tv~~~~~~~~~~~~gvd~i~T------D~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+++..+++. +++|..- ++.+.+++.+++.+|+++|.. +.|..+.++..+++......|+.
T Consensus 776 ~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~~~~~~~~~l~~~l~~~G~~ 844 (1025)
T 1gte_A 776 RAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIE 844 (1025)
T ss_dssp HHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCccHHHHHHHHHHHHHHHcCCC
Confidence 356666543 6887654 688999999999999999876 45666777777777777777763
No 329
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=28.89 E-value=1.1e+02 Score=21.44 Aligned_cols=34 Identities=6% Similarity=-0.010 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCCeEEEeeCCC-HHHHHHHH-hCCCC
Q 028497 145 EKLVRTFHGRNKRVFAWTVDD-EDSMRKML-HERVD 178 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~-~~~~~~~~-~~gvd 178 (208)
.++++.++++|+++.+-|-+. ...++..+ ..|++
T Consensus 74 ~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 74 PEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp HHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 467888999999999999776 45555544 55654
No 330
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=28.67 E-value=2e+02 Score=22.12 Aligned_cols=85 Identities=7% Similarity=0.033 Sum_probs=47.0
Q ss_pred CHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhC--CCeEEEeeCCCHHHHHHH
Q 028497 95 SDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGR--NKRVFAWTVDDEDSMRKM 172 (208)
Q Consensus 95 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--g~~v~~wtv~~~~~~~~~ 172 (208)
+.+.++.+++. .++|+..... +.....-+.....|++++........+++++.+++. ++.+.+ .+.+++++..+
T Consensus 66 ~~~~i~~i~~~-~~~Pvi~~~~--~~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~-~v~~~~~~~~a 141 (297)
T 2zbt_A 66 DPKIIKEIMAA-VSIPVMAKVR--IGHFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVC-GARNLGEALRR 141 (297)
T ss_dssp CHHHHHHHHTT-CSSCEEEEEE--TTCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEE-EESSHHHHHHH
T ss_pred CHHHHHHHHHh-cCCCeEEEec--cCCHHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEe-ecCCHHHHHHH
Confidence 34567777764 3566543222 222111122344788887432211123445555554 555442 35678888889
Q ss_pred HhCCCCEEEcC
Q 028497 173 LHERVDAVVTS 183 (208)
Q Consensus 173 ~~~gvd~i~TD 183 (208)
.+.|+|.|.++
T Consensus 142 ~~~Gad~I~v~ 152 (297)
T 2zbt_A 142 IAEGAAMIRTK 152 (297)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEc
Confidence 99999999765
No 331
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=28.64 E-value=1.1e+02 Score=19.09 Aligned_cols=49 Identities=10% Similarity=0.051 Sum_probs=31.0
Q ss_pred HHHHHHHhC----CCeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHGR----NKRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~~----g~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++. +.++.+..-.+......+++.|++++++- .+..+.+.++.
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~ 121 (127)
T 2gkg_A 67 LICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGA 121 (127)
T ss_dssp HHHHHHHHSTTTTTSCEEEEECGGGHHHHHHSTTCCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHhcCccccCCCEEEEecCCchhHHHHHHhCcchheeCCCCHHHHHHHHHH
Confidence 455555543 56666554445667778889999998875 44555554443
No 332
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=28.60 E-value=1.2e+02 Score=22.36 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=19.3
Q ss_pred HHHHHHhCCCeEEEeeCC---CH----HHHHHHHhCC-CCEEEcCC
Q 028497 147 LVRTFHGRNKRVFAWTVD---DE----DSMRKMLHER-VDAVVTSN 184 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~---~~----~~~~~~~~~g-vd~i~TD~ 184 (208)
+-+.+.++|+.+.+...+ +. +.++.++..+ +|||+..-
T Consensus 22 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~ 67 (276)
T 3ksm_A 22 AQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAP 67 (276)
T ss_dssp HHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 334555566666555421 22 2344555556 66666543
No 333
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=28.56 E-value=92 Score=23.66 Aligned_cols=35 Identities=9% Similarity=0.073 Sum_probs=16.9
Q ss_pred HHHHHhCCCeEEEeeCCCH-----HHHHHHHhCCCCEEEc
Q 028497 148 VRTFHGRNKRVFAWTVDDE-----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv~~~-----~~~~~~~~~gvd~i~T 182 (208)
-+.++++|+.+.+...++. ..++.+...++||||.
T Consensus 50 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi 89 (305)
T 3huu_A 50 NQACNVRGYSTRMTVSENSGDLYHEVKTMIQSKSVDGFIL 89 (305)
T ss_dssp HHHHHHHTCEEEECCCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEE
Confidence 3445556666555444332 1233344556666553
No 334
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=28.50 E-value=58 Score=27.81 Aligned_cols=52 Identities=8% Similarity=0.096 Sum_probs=38.8
Q ss_pred hcCceEeecccc----cCHHHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 131 RKAGVVGVYHPL----IDEKLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 131 ~~~~~~~~~~~~----~~~~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.|++.+.+.... .-.++++.+++. ++++.+=++.+.+.++.+.+.|+|+|..
T Consensus 267 aGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 267 ASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred hccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEE
Confidence 678877654321 112567777765 5788888899999999999999999973
No 335
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=28.49 E-value=1.9e+02 Score=22.63 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=40.5
Q ss_pred CHHHHHHHHhCCCeEEE----ee---C---------CCHH--------HHHHHHhCCCCEEEcC--Ch-----HHHHHHH
Q 028497 144 DEKLVRTFHGRNKRVFA----WT---V---------DDED--------SMRKMLHERVDAVVTS--NP-----ILFQRVM 192 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~----wt---v---------~~~~--------~~~~~~~~gvd~i~TD--~P-----~~~~~~~ 192 (208)
+.++++.+|+.|++|.+ |+ . .+++ .++.+.+.|.|||--| +| +.+..++
T Consensus 55 ~~~~~~~~~~~~~kv~lsigg~~~~~~~~~~~~~~~~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p~~~d~~~~~~ll 134 (319)
T 3cz8_A 55 DAAAIETTWQRRVTPLATITNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTIDFEQVSAADRDLFTGFL 134 (319)
T ss_dssp CHHHHHHHHHTTCEEEEEEECEETTEECHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEEECCSCCGGGHHHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEEecCCCCCcCHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCCeEEEeccCCCHHHHHHHHHHH
Confidence 56788999999999875 32 1 1222 2233446799999887 33 4566778
Q ss_pred HHHHhhhhhcCc
Q 028497 193 QDIRTQCLEEGF 204 (208)
Q Consensus 193 ~~~~~~~~~~~~ 204 (208)
++++..+..+|+
T Consensus 135 ~eLr~~l~~~~~ 146 (319)
T 3cz8_A 135 RQLRDRLQAGGY 146 (319)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHhhcCc
Confidence 888877766553
No 336
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=28.44 E-value=1.2e+02 Score=19.58 Aligned_cols=49 Identities=6% Similarity=0.120 Sum_probs=33.8
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++ .+.++.+.|.. +......+++.|++++++- .+..+.+.++.
T Consensus 79 ~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~ 134 (149)
T 1k66_A 79 EVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQT 134 (149)
T ss_dssp HHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHH
Confidence 45555555 35678877764 4677888899999999886 45566555554
No 337
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=28.43 E-value=1.2e+02 Score=27.05 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=42.4
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHH-HhCCCCEEEcC-ChHHHHHHHHHHHh
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKM-LHERVDAVVTS-NPILFQRVMQDIRT 197 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~-~~~gvd~i~TD-~P~~~~~~~~~~~~ 197 (208)
++.++.++++|+++.+=|.++....+.. .++|++.+..+ .|+.-.+.+++++.
T Consensus 541 ~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~ 595 (723)
T 3j09_A 541 KPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQA 595 (723)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCCHHHHHHHHHHHhc
Confidence 5789999999999999999888776665 46899999888 57776777776643
No 338
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=28.40 E-value=1.3e+02 Score=20.00 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=31.6
Q ss_pred HHHHHHHh--CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHH
Q 028497 146 KLVRTFHG--RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQ 193 (208)
Q Consensus 146 ~~v~~~~~--~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~ 193 (208)
++++.+++ .+.++.+.|.. +.+....+++.|++++++- .+..+.+.++
T Consensus 100 ~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~ 152 (157)
T 3hzh_A 100 TCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVM 152 (157)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHH
Confidence 34444443 45778777764 5777888999999998875 3445554443
No 339
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=28.39 E-value=2e+02 Score=22.05 Aligned_cols=58 Identities=9% Similarity=0.092 Sum_probs=37.3
Q ss_pred HHHHHHHhCCCeEE---EeeC-CCH----HHHHHHHhCCCCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 146 KLVRTFHGRNKRVF---AWTV-DDE----DSMRKMLHERVDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 146 ~~v~~~~~~g~~v~---~wtv-~~~----~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
.+.+.++++|+.+. ++.. .+. ..++.+++..+++|++-+-..+..+++..+ +.|..+|
T Consensus 201 Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ai~~~~d~~A~g~~~al~----~~G~~vP 266 (332)
T 2o20_A 201 GYQEALLEANIEFDENLVFEGNYSYEQGKALAERLLERGATSAVVSHDTVAVGLLSAMM----DKGVKVP 266 (332)
T ss_dssp HHHHHHHHTTCCCCGGGEECSCCSHHHHHHHHHHHHHTTCCEEEESCHHHHHHHHHHHH----HTTCCTT
T ss_pred HHHHHHHHcCCCCChhhEEeCCCCHHHHHHHHHHHhccCCCEEEECChHHHHHHHHHHH----HcCCCCc
Confidence 45667888998653 2222 232 245556655899999988777777776555 5666655
No 340
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=28.32 E-value=2.2e+02 Score=22.52 Aligned_cols=54 Identities=11% Similarity=0.110 Sum_probs=38.4
Q ss_pred HHHHHHHHhCCCeEEEeeC----CCH----HHHHHHHhCCCCEEEc-C-----ChHHHHHHHHHHHhh
Q 028497 145 EKLVRTFHGRNKRVFAWTV----DDE----DSMRKMLHERVDAVVT-S-----NPILFQRVMQDIRTQ 198 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv----~~~----~~~~~~~~~gvd~i~T-D-----~P~~~~~~~~~~~~~ 198 (208)
.+.++++++.|+.|..-.. .++ +.++.+.++|++.|.- | .|..+.++++..++.
T Consensus 125 ~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 125 VAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDN 192 (325)
T ss_dssp HHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHh
Confidence 5678999999999864332 233 3456677889998752 3 899999988877654
No 341
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=28.30 E-value=1.6e+02 Score=24.74 Aligned_cols=58 Identities=12% Similarity=0.189 Sum_probs=36.8
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcC---ChHHHHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTS---NPILFQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD---~P~~~~~~~~~~~~~~~~~~~ 204 (208)
++-+.++++|.++.+-..+..+.+..++ +.|++.|.+| -|. ..+.-+..+..|.+.|.
T Consensus 61 ~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~v~~~~~~~p~-~~~rd~~v~~~l~~~gi 122 (484)
T 1owl_A 61 ELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQDIEPY-GRDRDGQVAAALKTAGI 122 (484)
T ss_dssp HHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSHH-HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCEEEEeccCChh-HHHHHHHHHHHHHHcCc
Confidence 4445677888888887766666777766 4789999885 232 22223344566665554
No 342
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=28.25 E-value=2e+02 Score=24.48 Aligned_cols=91 Identities=11% Similarity=0.015 Sum_probs=54.4
Q ss_pred eCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec-c-c-cc-----CHHHH----HHHHh----CCCe
Q 028497 94 KSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY-H-P-LI-----DEKLV----RTFHG----RNKR 157 (208)
Q Consensus 94 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~-----~~~~v----~~~~~----~g~~ 157 (208)
+..+.++++++.. ++|+.+--...+ .....+...|++++.+. + . .+ +-+.+ +.+.. .+++
T Consensus 330 ~~~~~i~~lr~~~-~~PvivKgv~~~---e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ip 405 (511)
T 1kbi_A 330 LTWKDIEELKKKT-KLPIVIKGVQRT---EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLE 405 (511)
T ss_dssp CCHHHHHHHHHHC-SSCEEEEEECSH---HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBE
T ss_pred hHHHHHHHHHHHh-CCcEEEEeCCCH---HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcE
Confidence 3466788888864 566654321111 11122344788887652 1 1 11 11222 33332 2577
Q ss_pred EEEe-eCCCHHHHHHHHhCCCCEEEcCChHHH
Q 028497 158 VFAW-TVDDEDSMRKMLHERVDAVVTSNPILF 188 (208)
Q Consensus 158 v~~w-tv~~~~~~~~~~~~gvd~i~TD~P~~~ 188 (208)
|++- ++.+..++.+++.+|+|+|..-.|-..
T Consensus 406 Via~GGI~~g~Dv~kaLalGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 406 VFVDGGVRRGTDVLKALCLGAKGVGLGRPFLY 437 (511)
T ss_dssp EEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 7664 578999999999999999999887654
No 343
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=28.22 E-value=2.4e+02 Score=22.85 Aligned_cols=135 Identities=10% Similarity=0.052 Sum_probs=75.8
Q ss_pred cCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEE--ee--C---HHHHHHHHhhccCCeEE
Q 028497 40 VITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVW--AK--S---DNLVRDIMRLSSNVTAG 112 (208)
Q Consensus 40 ~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~--Sf--~---~~~l~~l~~~~p~~~~~ 112 (208)
+..+++|+.+.++.....+..-+... ......++.+.+.|.. .+.. +. . .+.++++|+..|++++.
T Consensus 73 ~~~s~ee~~~~i~~~~~~~~~~~g~~------~~~~e~~~~a~~aGvd-vI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi 145 (361)
T 3r2g_A 73 RFMTIEENIQEFKKCKGPVFVSVGCT------ENELQRAEALRDAGAD-FFCVDVAHAHAKYVGKTLKSLRQLLGSRCIM 145 (361)
T ss_dssp SCSCHHHHHHHHHTCCSCCBEEECSS------HHHHHHHHHHHHTTCC-EEEEECSCCSSHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHhhcceEEEEEcCCC------HHHHHHHHHHHHcCCC-EEEEeCCCCCcHhHHHHHHHHHHhcCCCeEE
Confidence 34789999998875321222223322 2233445566666764 4333 21 2 24788888887888875
Q ss_pred E-EEEecCCCchhhhHhhhhcCceEeec-cc--c----------c-CHHHHHHHHhCCCeEEE-eeCCCHHHHHHHHhCC
Q 028497 113 Y-IIMVDPSTGFRTNLLRIRKAGVVGVY-HP--L----------I-DEKLVRTFHGRNKRVFA-WTVDDEDSMRKMLHER 176 (208)
Q Consensus 113 ~-l~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~----------~-~~~~v~~~~~~g~~v~~-wtv~~~~~~~~~~~~g 176 (208)
. ... .+ .....+...|+|++.+- ++ . . .-..+..+.+.-.+|.+ -++.+..++.+++.+|
T Consensus 146 ~G~V~-T~---e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~~~~di~kALa~G 221 (361)
T 3r2g_A 146 AGNVA-TY---AGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIVKALAFG 221 (361)
T ss_dssp EEEEC-SH---HHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCCSHHHHHHHHHTT
T ss_pred EcCcC-CH---HHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCCCHHHHHHHHHcC
Confidence 4 121 11 11122234788877641 11 1 1 11334444443336665 4688999999999999
Q ss_pred CCEEEcCCh
Q 028497 177 VDAVVTSNP 185 (208)
Q Consensus 177 vd~i~TD~P 185 (208)
+|+|.--.+
T Consensus 222 Ad~V~iGr~ 230 (361)
T 3r2g_A 222 ADFVMIGGM 230 (361)
T ss_dssp CSEEEESGG
T ss_pred CCEEEEChH
Confidence 999986544
No 344
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=28.19 E-value=2.3e+02 Score=22.75 Aligned_cols=90 Identities=13% Similarity=-0.013 Sum_probs=53.7
Q ss_pred eCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecc--c------ccCHHHHHHHHh-C--CCeEEEe-
Q 028497 94 KSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYH--P------LIDEKLVRTFHG-R--NKRVFAW- 161 (208)
Q Consensus 94 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~v~~~~~-~--g~~v~~w- 161 (208)
+..+.++++++.. ++|+.+-....+ .....+...|++++.+.. . ..+.+.+..+++ . .++|..=
T Consensus 212 ~~~~~i~~l~~~~-~~pv~vK~~~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~G 287 (370)
T 1gox_A 212 LSWKDVAWLQTIT-SLPILVKGVITA---EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDG 287 (370)
T ss_dssp CCHHHHHHHHHHC-CSCEEEECCCSH---HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEES
T ss_pred chHHHHHHHHHHh-CCCEEEEecCCH---HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEEC
Confidence 3456678887764 566643111111 111222347888876521 1 122344555444 2 5777654
Q ss_pred eCCCHHHHHHHHhCCCCEEEcCChHH
Q 028497 162 TVDDEDSMRKMLHERVDAVVTSNPIL 187 (208)
Q Consensus 162 tv~~~~~~~~~~~~gvd~i~TD~P~~ 187 (208)
++.+..++.+++.+|+|++..-.|-.
T Consensus 288 GI~~~~D~~k~l~~GAdaV~iGr~~l 313 (370)
T 1gox_A 288 GVRRGTDVFKALALGAAGVFIGRPVV 313 (370)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEeecHHHH
Confidence 68899999999999999999887654
No 345
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=28.05 E-value=1.8e+02 Score=21.37 Aligned_cols=85 Identities=16% Similarity=0.080 Sum_probs=50.3
Q ss_pred HHHHHHHHhhcc-CCe-EEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHhCCCeEE-EeeCCCHHHHHHH
Q 028497 96 DNLVRDIMRLSS-NVT-AGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKRVF-AWTVDDEDSMRKM 172 (208)
Q Consensus 96 ~~~l~~l~~~~p-~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~-~wtv~~~~~~~~~ 172 (208)
++.++.+.+..| .+. +|+... +......++.+..+.+++..|... +++.++.++. +++++ +..+.+..++..+
T Consensus 40 ~~~a~~i~~~~~~~~~~VgVfvn--~~~~~i~~~~~~~~ld~vQLHG~e-~~~~~~~l~~-~~~vika~~v~~~~~l~~~ 115 (205)
T 1nsj_A 40 PEDARRISVELPPFVFRVGVFVN--EEPEKILDVASYVQLNAVQLHGEE-PIELCRKIAE-RILVIKAVGVSNERDMERA 115 (205)
T ss_dssp HHHHHHHHHHSCSSSEEEEEESS--CCHHHHHHHHHHHTCSEEEECSCC-CHHHHHHHHT-TSEEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEEeC--CCHHHHHHHHHhhCCCEEEECCCC-CHHHHHHHhc-CCCEEEEEEcCCHHHHHHH
Confidence 344555555444 333 444332 211111344456788888887543 7788887763 46654 4567777777776
Q ss_pred HhCCCCEEEcCC
Q 028497 173 LHERVDAVVTSN 184 (208)
Q Consensus 173 ~~~gvd~i~TD~ 184 (208)
....+|++..|-
T Consensus 116 ~~~~~d~~LlD~ 127 (205)
T 1nsj_A 116 LNYREFPILLDT 127 (205)
T ss_dssp GGGTTSCEEEEE
T ss_pred HHcCCCEEEECC
Confidence 666689998884
No 346
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=28.03 E-value=99 Score=23.26 Aligned_cols=14 Identities=29% Similarity=0.460 Sum_probs=7.1
Q ss_pred HHHHHhCCCCEEEc
Q 028497 169 MRKMLHERVDAVVT 182 (208)
Q Consensus 169 ~~~~~~~gvd~i~T 182 (208)
++.+...++|||+.
T Consensus 60 ~~~l~~~~vdgiIi 73 (290)
T 2rgy_A 60 VRFLIGRDCDGVVV 73 (290)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHhcCccEEEE
Confidence 34444555665553
No 347
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=27.91 E-value=1.3e+02 Score=22.72 Aligned_cols=36 Identities=11% Similarity=0.190 Sum_probs=16.4
Q ss_pred HHHHHHhCCCeEEEeeCC-CH----HHHHHHHhCCCCEEEc
Q 028497 147 LVRTFHGRNKRVFAWTVD-DE----DSMRKMLHERVDAVVT 182 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~-~~----~~~~~~~~~gvd~i~T 182 (208)
+-+.+.++|+.+.+...+ +. ..++.+...++||||.
T Consensus 36 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi 76 (301)
T 3miz_A 36 IQDWANANGKTILIANTGGSSEREVEIWKMFQSHRIDGVLY 76 (301)
T ss_dssp HHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEE
Confidence 334455555555544332 21 1233444555666553
No 348
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=27.82 E-value=1.4e+02 Score=23.81 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=31.0
Q ss_pred HHHHHHhCCCeEEEeeC--CCHHHHHHHHhCCCCEEEcCChHH
Q 028497 147 LVRTFHGRNKRVFAWTV--DDEDSMRKMLHERVDAVVTSNPIL 187 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv--~~~~~~~~~~~~gvd~i~TD~P~~ 187 (208)
.+..+|.+|+++.+++- .++.....++.+|++++... |..
T Consensus 239 vv~aar~aG~~vgvcge~~~dp~~~~~l~~lG~~~~si~-p~~ 280 (324)
T 2xz9_A 239 VIDAAHKEGKFAAMCGEMAGDPLAAVILLGLGLDEFSMS-ATS 280 (324)
T ss_dssp HHHHHHHTTCEEEECSGGGGCHHHHHHHHHHTCCEEEEC-GGG
T ss_pred HHHHHHHHCCceeecCccCCCHHHHHHHHHCCCCEEEEC-hhH
Confidence 46678999999988642 37888999999999996554 443
No 349
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=27.80 E-value=1.1e+02 Score=23.01 Aligned_cols=63 Identities=10% Similarity=0.107 Sum_probs=38.2
Q ss_pred hcCceEeec---c---ccc--CHHHHHHHHhC-CCeEEE-eeCCCHH-HHHHHHhCCCCEEE------cCChHHHHHHHH
Q 028497 131 RKAGVVGVY---H---PLI--DEKLVRTFHGR-NKRVFA-WTVDDED-SMRKMLHERVDAVV------TSNPILFQRVMQ 193 (208)
Q Consensus 131 ~~~~~~~~~---~---~~~--~~~~v~~~~~~-g~~v~~-wtv~~~~-~~~~~~~~gvd~i~------TD~P~~~~~~~~ 193 (208)
.|++++++. . +.+ -+..++.+++. .+++-+ .-+.+++ -++.+.+.|+|+|+ ++.+..+.+.++
T Consensus 24 ~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~ 103 (231)
T 3ctl_A 24 SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIR 103 (231)
T ss_dssp TTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHH
T ss_pred cCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHH
Confidence 567766542 1 222 47788888875 344322 2344544 46778899999998 666655555444
No 350
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=27.75 E-value=98 Score=24.63 Aligned_cols=45 Identities=11% Similarity=-0.008 Sum_probs=32.0
Q ss_pred HHHHHHHhCCCeEEEee----------CC--CHHHHHH----HHhCCCC----EEEcCChHHHHH
Q 028497 146 KLVRTFHGRNKRVFAWT----------VD--DEDSMRK----MLHERVD----AVVTSNPILFQR 190 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wt----------v~--~~~~~~~----~~~~gvd----~i~TD~P~~~~~ 190 (208)
..++.+++.|+++.+|. .| +++.+.+ ..++|+| .|=|++|+.+.+
T Consensus 167 ~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y~e~f~~ 231 (307)
T 3fok_A 167 HAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVVEEMER 231 (307)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECCTTHHH
T ss_pred HHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCCcHHHHH
Confidence 45778999999998872 12 3444443 4578999 999999965543
No 351
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=27.60 E-value=1.2e+02 Score=19.27 Aligned_cols=50 Identities=14% Similarity=0.260 Sum_probs=35.0
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++ .+.++.+.|.. +.+....+++.|++++++- .+..+.+.++..
T Consensus 72 ~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~ 128 (140)
T 1k68_A 72 EVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGI 128 (140)
T ss_dssp HHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHH
Confidence 45566655 35778888764 4677888899999999876 556666655543
No 352
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=27.55 E-value=1.3e+02 Score=19.49 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=32.7
Q ss_pred HHHHHHHh--CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHG--RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~--~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++ .+.++.+.|.. +.+....+++.|++++++- .+..+...++.
T Consensus 66 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~ 119 (143)
T 3jte_A 66 DILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINN 119 (143)
T ss_dssp HHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHH
Confidence 34444443 46778777764 4667888999999998875 55555555543
No 353
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=27.51 E-value=1.3e+02 Score=22.32 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=16.4
Q ss_pred HHHHHHhCCCeEEEeeCCCHHHHH-HHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNKRVFAWTVDDEDSMR-KMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~~~~~~-~~~~~gvd~i~TD 183 (208)
.++.+..+++.-.+....+.+.++ .+.+.|+-.|+.|
T Consensus 56 ~~~~l~~~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~ 93 (277)
T 3e61_A 56 YLATFVSHNCTGMISTAFNENIIENTLTDHHIPFVFID 93 (277)
T ss_dssp HHHHHHHTTCSEEEECGGGHHHHHHHHHHC-CCEEEGG
T ss_pred HHHHHHhCCCCEEEEecCChHHHHHHHHcCCCCEEEEe
Confidence 344444455544333333344444 5555555555444
No 354
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=27.39 E-value=1.1e+02 Score=26.04 Aligned_cols=57 Identities=11% Similarity=0.077 Sum_probs=40.5
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcC---ChHHHHHHHHHHHhhhhhcC
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTS---NPILFQRVMQDIRTQCLEEG 203 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD---~P~~~~~~~~~~~~~~~~~~ 203 (208)
++-+.++++|.++.+-..+..+.+.+++ +.|++.|.+| -|.... .-+..+..|.+.|
T Consensus 104 ~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~p~~~~-rd~~v~~~l~~~g 164 (525)
T 2j4d_A 104 DLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVD-VERLVNQGLKRVG 164 (525)
T ss_dssp HHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCSEEEEECCCSHHHHH-HHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCCEEEEeccCCHHHHH-HHHHHHHHHHhcC
Confidence 4556688899999988776677777776 4799999999 554433 2344566676666
No 355
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=27.32 E-value=1.5e+02 Score=22.06 Aligned_cols=8 Identities=13% Similarity=0.293 Sum_probs=4.4
Q ss_pred CeEEEEEE
Q 028497 109 VTAGYIIM 116 (208)
Q Consensus 109 ~~~~~l~~ 116 (208)
..+|++..
T Consensus 8 ~~Ig~i~~ 15 (289)
T 1dbq_A 8 KSIGLLAT 15 (289)
T ss_dssp CEEEEEES
T ss_pred CEEEEEeC
Confidence 35666653
No 356
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=26.96 E-value=1.9e+02 Score=24.37 Aligned_cols=58 Identities=14% Similarity=0.086 Sum_probs=44.2
Q ss_pred cCHHHHHHHHhCCCeEEEee------CCC-------HHHHHHHHhCCCCEEEc-------CChHHHHHHHHHHHhhhh
Q 028497 143 IDEKLVRTFHGRNKRVFAWT------VDD-------EDSMRKMLHERVDAVVT-------SNPILFQRVMQDIRTQCL 200 (208)
Q Consensus 143 ~~~~~v~~~~~~g~~v~~wt------v~~-------~~~~~~~~~~gvd~i~T-------D~P~~~~~~~~~~~~~~~ 200 (208)
+.+.+++.++.+|++|.+=| +++ ..+...++--|+|+|+- +||.++.+.+.+.....+
T Consensus 269 ~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE 346 (461)
T 3qtg_A 269 VQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVE 346 (461)
T ss_dssp HHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCCCCHHHHHHHHHHHHHHHH
Confidence 44678999999999998855 221 24677888899999964 499999999988754443
No 357
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=26.92 E-value=1.1e+02 Score=22.72 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCeEEEeeC---CCH-----HHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGRNKRVFAWTV---DDE-----DSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv---~~~-----~~~~~~~~~gvd~i~TD 183 (208)
...+.+.++|++++++.. ++. +..+.+.+.++|.|+.=
T Consensus 43 ~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~a 88 (211)
T 3p9x_A 43 KVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLA 88 (211)
T ss_dssp HHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHhcCCCEEEEe
Confidence 455677788888877653 332 23455567788887764
No 358
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=26.92 E-value=1.3e+02 Score=25.25 Aligned_cols=43 Identities=14% Similarity=0.161 Sum_probs=30.6
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcCChHHH
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTSNPILF 188 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD~P~~~ 188 (208)
++-+.++++|.++.+...+..+.+..++ +.|++.|.+|.+..-
T Consensus 96 ~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~V~~~~~~~~ 139 (482)
T 2xry_A 96 ELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVTDFSPLR 139 (482)
T ss_dssp HHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSEEEEECCCSH
T ss_pred HHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCEEEEecccch
Confidence 3445677888888887766666677765 468888888865543
No 359
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=26.91 E-value=1.6e+02 Score=22.08 Aligned_cols=59 Identities=15% Similarity=0.093 Sum_probs=38.3
Q ss_pred HHHHHHHhCCCeEE---EeeCCCH----HHHHHHHhC--CCCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 146 KLVRTFHGRNKRVF---AWTVDDE----DSMRKMLHE--RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 146 ~~v~~~~~~g~~v~---~wtv~~~----~~~~~~~~~--gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
.+.+.++++|+.+. +.+-.+. +.++.+++. .+++|++-+-..+..+++..+ +.|..+|+
T Consensus 146 Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~A~g~~~al~----~~g~~vP~ 213 (289)
T 3k9c_A 146 GFLAAMDRHGLSASATVVTGGTTETEGAEGMHTLLEMPTPPTAVVAFNDRCATGVLDLLV----RSGRDVPA 213 (289)
T ss_dssp HHHHHHHHTTCGGGEEEECCCSSHHHHHHHHHHHHTSSSCCSEEEESSHHHHHHHHHHHH----HTTCCTTT
T ss_pred HHHHHHHHCCCCCCccEEECCCCHHHHHHHHHHHHcCCCCCCEEEECChHHHHHHHHHHH----HcCCCCCC
Confidence 45677889998732 2222232 245666663 599999988888777777655 66666653
No 360
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=26.80 E-value=1.2e+02 Score=23.08 Aligned_cols=8 Identities=38% Similarity=0.405 Sum_probs=4.1
Q ss_pred CeEEEEEE
Q 028497 109 VTAGYIIM 116 (208)
Q Consensus 109 ~~~~~l~~ 116 (208)
..+|++..
T Consensus 16 ~~Igvi~~ 23 (303)
T 3kke_A 16 GTIGLIVP 23 (303)
T ss_dssp -CEEEEES
T ss_pred CEEEEEeC
Confidence 44666654
No 361
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=26.46 E-value=1.5e+02 Score=22.35 Aligned_cols=14 Identities=0% Similarity=0.204 Sum_probs=7.1
Q ss_pred HHHHHhCCCCEEEc
Q 028497 169 MRKMLHERVDAVVT 182 (208)
Q Consensus 169 ~~~~~~~gvd~i~T 182 (208)
++.++..++|||+.
T Consensus 54 i~~l~~~~vdgiIi 67 (305)
T 3g1w_A 54 LEQAIAKNPAGIAI 67 (305)
T ss_dssp HHHHHHHCCSEEEE
T ss_pred HHHHHHhCCCEEEE
Confidence 34444555666554
No 362
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=26.45 E-value=2.2e+02 Score=21.89 Aligned_cols=81 Identities=10% Similarity=-0.082 Sum_probs=49.9
Q ss_pred HHHHHHHhhccC-CeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHH----HHhC--CCeEEEeeCCCHHHH
Q 028497 97 NLVRDIMRLSSN-VTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRT----FHGR--NKRVFAWTVDDEDSM 169 (208)
Q Consensus 97 ~~l~~l~~~~p~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~----~~~~--g~~v~~wtv~~~~~~ 169 (208)
+.++.+++..|. .++++.... +.+ . .+. -..|++++.... .+++.++. ++.. ++++.+=+-=+++.+
T Consensus 170 ~ai~~~r~~~~~~~~i~vev~t-lee-~-~~A-~~aGaD~I~ld~--~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni 243 (273)
T 2b7n_A 170 SFLTHARKNLPFTAKIEIECES-FEE-A-KNA-MNAGADIVMCDN--LSVLETKEIAAYRDAHYPFVLLEASGNISLESI 243 (273)
T ss_dssp HHHHHHGGGSCTTCCEEEEESS-HHH-H-HHH-HHHTCSEEEEET--CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTH
T ss_pred HHHHHHHHhCCCCceEEEEcCC-HHH-H-HHH-HHcCCCEEEECC--CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHH
Confidence 467788887775 567664432 111 1 111 126888876543 45555443 3321 277776654588899
Q ss_pred HHHHhCCCCEEEcC
Q 028497 170 RKMLHERVDAVVTS 183 (208)
Q Consensus 170 ~~~~~~gvd~i~TD 183 (208)
..+.+.|||+|-+-
T Consensus 244 ~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 244 NAYAKSGVDAISVG 257 (273)
T ss_dssp HHHHTTTCSEEECT
T ss_pred HHHHHcCCcEEEEc
Confidence 99999999999764
No 363
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=26.39 E-value=1.8e+02 Score=22.40 Aligned_cols=38 Identities=11% Similarity=0.184 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccCCeEEEEEE
Q 028497 71 KGLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSNVTAGYIIM 116 (208)
Q Consensus 71 ~~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~~~~~~l~~ 116 (208)
++.-++|.+.+++.|+.. + ...+.++. .....+|++..
T Consensus 29 ~~tr~rV~~~a~~lgY~p------n-~~ar~l~~-~~~~~Igvi~~ 66 (340)
T 1qpz_A 29 EETRNAVWAAIKELHYSP------S-AVARSLKV-NHTKSIGLLAT 66 (340)
T ss_dssp HHHHHHHHHHHHHHTCCC------C-HHHHHHHH-TCCSEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCC------C-HHHHhhcc-CCCCEEEEEeC
Confidence 367788888888888521 1 22244444 23456787774
No 364
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=26.11 E-value=1.9e+02 Score=22.15 Aligned_cols=72 Identities=18% Similarity=0.224 Sum_probs=46.4
Q ss_pred CceEeec----ccccCHHHHHHHHhC-CCeEEE--eeCCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHHHhhhhhcCcc
Q 028497 133 AGVVGVY----HPLIDEKLVRTFHGR-NKRVFA--WTVDDEDSMRKMLHERVDAVVTSNPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 133 ~~~~~~~----~~~~~~~~v~~~~~~-g~~v~~--wtv~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+..+++. +..-+.+.++.+++. +++|.. |.++.. ++..+...|+|+|.-+....-..-++++...|.+.|+.
T Consensus 74 A~~IsVlTd~~~F~gs~~dL~~ir~~v~lPvLrKDfi~~~~-qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~ 152 (251)
T 1i4n_A 74 ADAISILTEKHYFKGDPAFVRAARNLTCRPILAKDFYIDTV-QVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMD 152 (251)
T ss_dssp CSEEEEECCCSSSCCCTHHHHHHHTTCCSCEEEECCCCSTH-HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCE
T ss_pred CCceEEEecccccCCCHHHHHHHHHhCCCCEEEeeCCCCHH-HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCe
Confidence 6666652 222355666776654 677753 445445 66669999999998886543335566677777777753
No 365
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.00 E-value=1.2e+02 Score=18.85 Aligned_cols=52 Identities=12% Similarity=0.344 Sum_probs=34.2
Q ss_pred HHHHHHHHhCCCeEEEeeC----CCHHHHH-HHHhCCC--CEEEcCChHHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAWTV----DDEDSMR-KMLHERV--DAVVTSNPILFQRVMQDIR 196 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv----~~~~~~~-~~~~~gv--d~i~TD~P~~~~~~~~~~~ 196 (208)
.++++-.+++|.++.++.- |+..+++ .+.+-|| |.+-+-.|+.+.+-+++.-
T Consensus 41 rdiiksmkdngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvrefl 99 (112)
T 2lnd_A 41 RDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFL 99 (112)
T ss_dssp HHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHH
Confidence 4567778899999888753 2223332 2334565 5577789999888777753
No 366
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=25.99 E-value=1.1e+02 Score=22.84 Aligned_cols=14 Identities=14% Similarity=0.593 Sum_probs=6.6
Q ss_pred HHHHHhCCCCEEEc
Q 028497 169 MRKMLHERVDAVVT 182 (208)
Q Consensus 169 ~~~~~~~gvd~i~T 182 (208)
++.++..+|||||.
T Consensus 50 i~~l~~~~vdgiIi 63 (283)
T 2ioy_A 50 VEDLIQQKVDVLLI 63 (283)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 33444455555443
No 367
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=25.99 E-value=1.1e+02 Score=25.33 Aligned_cols=33 Identities=12% Similarity=0.027 Sum_probs=27.0
Q ss_pred HHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 151 FHGRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 151 ~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
++..+++|..- ++.+..++.+++.+|+++|+.-
T Consensus 242 ~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 242 ASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp HTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEEC
T ss_pred HHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEC
Confidence 34468898876 5789999999999999998743
No 368
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=25.96 E-value=1.3e+02 Score=19.20 Aligned_cols=51 Identities=12% Similarity=0.184 Sum_probs=36.1
Q ss_pred HHHHHHHhC--CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDIR 196 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~~ 196 (208)
++++.+++. +.++.+.+.. +.+....+++.|++++++- .+..+.+.+++..
T Consensus 68 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~ 123 (137)
T 3hdg_A 68 EMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLEDFR 123 (137)
T ss_dssp HHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHH
Confidence 455666554 5677777754 4677888999999999876 6777777776553
No 369
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=25.91 E-value=2.6e+02 Score=22.53 Aligned_cols=93 Identities=16% Similarity=0.100 Sum_probs=56.6
Q ss_pred eeCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecc--c------ccCHHHHHHHHh---CCCeEEEe
Q 028497 93 AKSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYH--P------LIDEKLVRTFHG---RNKRVFAW 161 (208)
Q Consensus 93 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~v~~~~~---~g~~v~~w 161 (208)
++..+.++.+++.. ++|+.+--...+ .........|++++.+.. . ..+.+.+..+++ .+++|..-
T Consensus 215 ~~~~~~i~~lr~~~-~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~ 290 (368)
T 2nli_A 215 KISPRDIEEIAGHS-GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD 290 (368)
T ss_dssp BCCHHHHHHHHHHS-SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC
T ss_pred hhhHHHHHHHHHHc-CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE
Confidence 34566788888864 456543211111 111223447888876521 1 112344444443 25787765
Q ss_pred -eCCCHHHHHHHHhCCCCEEEcCChHHHH
Q 028497 162 -TVDDEDSMRKMLHERVDAVVTSNPILFQ 189 (208)
Q Consensus 162 -tv~~~~~~~~~~~~gvd~i~TD~P~~~~ 189 (208)
++.+..++.+++.+|+|+|..-.|-...
T Consensus 291 GGI~~g~D~~kalalGAd~V~iGr~~l~~ 319 (368)
T 2nli_A 291 SGVRRGEHVAKALASGADVVALGRPVLFG 319 (368)
T ss_dssp SSCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 5789999999999999999999876544
No 370
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=25.83 E-value=1.2e+02 Score=23.58 Aligned_cols=41 Identities=10% Similarity=0.113 Sum_probs=27.2
Q ss_pred cCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 143 IDEKLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 143 ~~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
++...++.+|+.|-++..-|+-|....+-+-+.|+|.|.|-
T Consensus 16 ~t~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~ilvG 56 (275)
T 3vav_A 16 VTVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQLIG 56 (275)
T ss_dssp CCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEEEEC
T ss_pred cCHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEEC
Confidence 44555566666676766667777666666667777777664
No 371
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=25.75 E-value=2.1e+02 Score=22.44 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=28.7
Q ss_pred CeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 156 KRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 156 ~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
+++.+ .+++.+++..+++.|+|+|.+| .|+.+++..+..
T Consensus 198 ~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l 238 (299)
T 2jbm_A 198 LKVEV-ECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVL 238 (299)
T ss_dssp SCEEE-EESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CeEEE-ecCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 45555 5677889999999999999999 456666555433
No 372
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=25.73 E-value=2.4e+02 Score=22.00 Aligned_cols=77 Identities=12% Similarity=-0.034 Sum_probs=48.9
Q ss_pred HHHHHHhhccC-CeEEEEEEecCCCchhhhHh--hhhcCceEeecccccCHHHHHHHHh---CCCeEEEeeCCCHHHHHH
Q 028497 98 LVRDIMRLSSN-VTAGYIIMVDPSTGFRTNLL--RIRKAGVVGVYHPLIDEKLVRTFHG---RNKRVFAWTVDDEDSMRK 171 (208)
Q Consensus 98 ~l~~l~~~~p~-~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~---~g~~v~~wtv~~~~~~~~ 171 (208)
.++.+|+..|. .+++..... . .+.. -..|+|++.... ++++.++.+.+ ..+++.+=+-=+.+.+..
T Consensus 185 av~~ar~~~~~~~~IgVev~t-~-----eea~eA~~aGaD~I~ld~--~~~~~~k~av~~v~~~ipi~AsGGIt~eni~~ 256 (286)
T 1x1o_A 185 AVRRAKARAPHYLKVEVEVRS-L-----EELEEALEAGADLILLDN--FPLEALREAVRRVGGRVPLEASGNMTLERAKA 256 (286)
T ss_dssp HHHHHHHHSCTTSCEEEEESS-H-----HHHHHHHHHTCSEEEEES--CCHHHHHHHHHHHTTSSCEEEESSCCHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEEeCC-H-----HHHHHHHHcCCCEEEECC--CCHHHHHHHHHHhCCCCeEEEEcCCCHHHHHH
Confidence 56777877765 577764421 1 1221 237888876544 33433333221 257887776668999999
Q ss_pred HHhCCCCEEEc
Q 028497 172 MLHERVDAVVT 182 (208)
Q Consensus 172 ~~~~gvd~i~T 182 (208)
+.+.|||+|.+
T Consensus 257 ~a~tGvD~IsV 267 (286)
T 1x1o_A 257 AAEAGVDYVSV 267 (286)
T ss_dssp HHHHTCSEEEC
T ss_pred HHHcCCCEEEE
Confidence 99999999976
No 373
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=25.69 E-value=90 Score=23.66 Aligned_cols=35 Identities=9% Similarity=0.053 Sum_probs=27.8
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCC
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVD 178 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd 178 (208)
+.+.++.++++|+++.+=|.+....+..++ .+|.+
T Consensus 31 ~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 31 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 467889999999999999999887776665 45554
No 374
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=25.58 E-value=1.4e+02 Score=19.23 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=35.4
Q ss_pred HHHHHHHhC--CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++. +.++.+.|.. +.+....+++.|++++++- .+..+...+++.
T Consensus 69 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~ 123 (136)
T 3kto_A 69 ELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIEKPFIEHVLVHDVQQI 123 (136)
T ss_dssp HHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEESSBCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHheeCCCCHHHHHHHHHHH
Confidence 566777665 5677777754 5677888999999999886 556666655543
No 375
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=25.56 E-value=1.9e+02 Score=21.63 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=36.2
Q ss_pred hcCceEeecccccCHHHHHHHHhCCCeEEEeeC------------CCH----HHHHHHHhCCCC--EEEcCChH--HHHH
Q 028497 131 RKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWTV------------DDE----DSMRKMLHERVD--AVVTSNPI--LFQR 190 (208)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv------------~~~----~~~~~~~~~gvd--~i~TD~P~--~~~~ 190 (208)
.+++.+.+.....+...++.+++.|+++.+..- |+. ...+++++.|.. ++++..+. ...+
T Consensus 64 ~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~ 143 (294)
T 3qk7_A 64 RRVDALIVAHTQPEDFRLQYLQKQNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQRIAFVSTDARISYVDQ 143 (294)
T ss_dssp TCCSEEEECSCCSSCHHHHHHHHTTCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEEESSCCHHHHH
T ss_pred CCCCEEEEeCCCCChHHHHHHHhCCCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCCCceEEEEeCCcccchHHH
Confidence 345554433322233566677777777665432 221 245667777754 34443332 1222
Q ss_pred HHHHHHhhhhhcCcc
Q 028497 191 VMQDIRTQCLEEGFS 205 (208)
Q Consensus 191 ~~~~~~~~~~~~~~~ 205 (208)
-++.++..+.+.|..
T Consensus 144 R~~Gf~~al~~~g~~ 158 (294)
T 3qk7_A 144 RLQGYVQTMSEAGLM 158 (294)
T ss_dssp HHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHCCCC
Confidence 233455555566643
No 376
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=25.51 E-value=1.5e+02 Score=19.51 Aligned_cols=50 Identities=18% Similarity=0.213 Sum_probs=35.6
Q ss_pred HHHHHHHhC----CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHGR----NKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~----g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++. ++++.+.|.. +......+++.|++++++= .++.+.+.++..
T Consensus 78 ~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~ 134 (149)
T 1i3c_A 78 EVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGI 134 (149)
T ss_dssp HHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCCHHHHHHHHHHH
Confidence 456666653 5788888764 5677888999999999876 456666666543
No 377
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=25.44 E-value=1.5e+02 Score=22.93 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=17.2
Q ss_pred HHHHHhCCCeEEEeeCC-CHH----HHHHHHhCCCCEEEc
Q 028497 148 VRTFHGRNKRVFAWTVD-DED----SMRKMLHERVDAVVT 182 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv~-~~~----~~~~~~~~gvd~i~T 182 (208)
-+.++++|+.+.+...+ +.+ .++.+...++||||.
T Consensus 86 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi 125 (338)
T 3dbi_A 86 ARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMI 125 (338)
T ss_dssp HHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEE
Confidence 34555666665554432 221 234445556666654
No 378
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=25.44 E-value=1.5e+02 Score=22.09 Aligned_cols=8 Identities=25% Similarity=0.426 Sum_probs=4.7
Q ss_pred CeEEEEEE
Q 028497 109 VTAGYIIM 116 (208)
Q Consensus 109 ~~~~~l~~ 116 (208)
..+|++..
T Consensus 9 ~~Igvv~~ 16 (291)
T 3egc_A 9 NVVGLIVS 16 (291)
T ss_dssp CEEEEEES
T ss_pred cEEEEEEC
Confidence 45666664
No 379
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=25.44 E-value=88 Score=22.07 Aligned_cols=59 Identities=7% Similarity=0.040 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCCeEEEeeCCC-------HHHHHHHHhC-C-CCEEEcCChHHHHHHHHHH-HhhhhhcC
Q 028497 145 EKLVRTFHGRNKRVFAWTVDD-------EDSMRKMLHE-R-VDAVVTSNPILFQRVMQDI-RTQCLEEG 203 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~-------~~~~~~~~~~-g-vd~i~TD~P~~~~~~~~~~-~~~~~~~~ 203 (208)
...++.+++.|+.+++.++.+ ...++.+-.. | -..+..+.+..+.++++++ +.-|.-+|
T Consensus 130 ~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~~~l~~~~~~i~~~ic~~eg 198 (198)
T 1n3y_A 130 KDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEG 198 (198)
T ss_dssp HHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHHHTC--
T ss_pred HHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcCCCcccEEEeCCHHHHHHHHHHHHhheeccCC
Confidence 456788999999999888754 3455555543 2 3346667777777777765 33454443
No 380
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=25.35 E-value=96 Score=24.00 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=27.0
Q ss_pred HHHHHHHHhC-CCeEEEe---eCCC-HHHHHHHHhCCCCEEEc
Q 028497 145 EKLVRTFHGR-NKRVFAW---TVDD-EDSMRKMLHERVDAVVT 182 (208)
Q Consensus 145 ~~~v~~~~~~-g~~v~~w---tv~~-~~~~~~~~~~gvd~i~T 182 (208)
.+.++.+++. +++|.+= ++.+ .+.++.+.+.|+|+|+.
T Consensus 153 ~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 153 AALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 4567777776 8888762 3334 44578888999999886
No 381
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=25.31 E-value=2.5e+02 Score=22.08 Aligned_cols=101 Identities=13% Similarity=0.064 Sum_probs=59.2
Q ss_pred HHHHHHHhcCCcceEEEee-C-HHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecc--------cccCH
Q 028497 76 DILSVIERTKCYNCLVWAK-S-DNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYH--------PLIDE 145 (208)
Q Consensus 76 ~v~~~l~~~~~~~~ii~Sf-~-~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 145 (208)
..++.+.+.|.. .+.+.+ . .+.++++++. +++++.-.. .+ .........|+|++.+.. ...+.
T Consensus 79 ~~~~~a~~~g~d-~V~~~~g~p~~~i~~l~~~--g~~v~~~v~-~~---~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~ 151 (332)
T 2z6i_A 79 DIVDLVIEEGVK-VVTTGAGNPSKYMERFHEA--GIIVIPVVP-SV---ALAKRMEKIGADAVIAEGMEAGGHIGKLTTM 151 (332)
T ss_dssp HHHHHHHHTTCS-EEEECSSCGGGTHHHHHHT--TCEEEEEES-SH---HHHHHHHHTTCSCEEEECTTSSEECCSSCHH
T ss_pred HHHHHHHHCCCC-EEEECCCChHHHHHHHHHc--CCeEEEEeC-CH---HHHHHHHHcCCCEEEEECCCCCCCCCCccHH
Confidence 445566666753 333333 3 3567777763 566654331 11 101122336777765521 11223
Q ss_pred HHHHHHH-hCCCeEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFH-GRNKRVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~-~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
.+++.++ ..+++|.+- ++++.+.+.+++.+|+|+|..-
T Consensus 152 ~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 152 TLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEec
Confidence 5566654 357888765 5788999999999999999754
No 382
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=25.29 E-value=1.6e+02 Score=22.96 Aligned_cols=15 Identities=13% Similarity=0.116 Sum_probs=0.0
Q ss_pred CCcCCCHHHHHHHHh
Q 028497 38 DQVITTIEDALTLVS 52 (208)
Q Consensus 38 ~~~iptL~evL~~~~ 52 (208)
+.+.||+.|+-+.+.
T Consensus 9 g~~~~ti~diA~~ag 23 (355)
T 3e3m_A 9 GHRPVTMRDVAKAAG 23 (355)
T ss_dssp ---------------
T ss_pred CCCCCcHHHHHHHhC
Confidence 567788888877753
No 383
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=25.16 E-value=1.3e+02 Score=22.56 Aligned_cols=37 Identities=8% Similarity=-0.017 Sum_probs=26.2
Q ss_pred HHHHHHhCCCeEEEeeC---CC-----HHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNKRVFAWTV---DD-----EDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv---~~-----~~~~~~~~~~gvd~i~TD 183 (208)
..+.++++|++++++.. ++ ++..+.+.+.++|.|++=
T Consensus 64 ~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a 108 (229)
T 3auf_A 64 GLERARRAGVDALHMDPAAYPSRTAFDAALAERLQAYGVDLVCLA 108 (229)
T ss_dssp HHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHcCCCEEEECcccccchhhccHHHHHHHHhcCCCEEEEc
Confidence 35778899999887654 23 334556667899988875
No 384
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=24.99 E-value=1.1e+02 Score=24.53 Aligned_cols=38 Identities=11% Similarity=0.018 Sum_probs=29.8
Q ss_pred HHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcCCh
Q 028497 148 VRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTSNP 185 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P 185 (208)
++.+++.|.++...+..+..-+..+.+.|+|++-.|.-
T Consensus 237 ~~~i~~~g~~~i~~~~G~~~~l~~l~~~g~d~~~~d~~ 274 (359)
T 2inf_A 237 FSELAKENVPLIMFGVGASHLAGDWHDLPLDVVGLDWR 274 (359)
T ss_dssp HHHHGGGCSCEEEECTTCGGGHHHHHTSSCSEEECCTT
T ss_pred HHHHHHcCCcEEEEcCCcHHHHHHHHHhCCCEEEeCCC
Confidence 55677778888888877766778888899999888744
No 385
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=24.93 E-value=85 Score=24.96 Aligned_cols=39 Identities=8% Similarity=0.084 Sum_probs=27.8
Q ss_pred HHHHHHhCCCCEEE----c----CChHHHHHHHHHHHhhhhhcCccc
Q 028497 168 SMRKMLHERVDAVV----T----SNPILFQRVMQDIRTQCLEEGFSL 206 (208)
Q Consensus 168 ~~~~~~~~gvd~i~----T----D~P~~~~~~~~~~~~~~~~~~~~~ 206 (208)
.++.++++|+|++- . ++-....+.+.+..++|.+.|+++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~ 179 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPI 179 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcE
Confidence 67778888999955 2 233444555667899999999763
No 386
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=24.73 E-value=1.4e+02 Score=23.19 Aligned_cols=48 Identities=10% Similarity=-0.025 Sum_probs=23.1
Q ss_pred CCcCCCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCC
Q 028497 38 DQVITTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKC 86 (208)
Q Consensus 38 ~~~iptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~ 86 (208)
+.+.||+.|+-+.+.=....+.-=+-... .-.++.-++|.+.+++.|+
T Consensus 7 ~~~~~ti~diA~~agVS~~TVSr~Ln~~~-~vs~~tr~rV~~~~~~lgY 54 (344)
T 3kjx_A 7 TKRPLTLRDVSEASGVSEMTVSRVLRNRG-DVSDATRARVLAAAKELGY 54 (344)
T ss_dssp ---CCCHHHHHHHHCCCSHHHHHHHTTCS-CCCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHcCCC-CCCHHHHHHHHHHHHHhCC
Confidence 34568888887776321000000000000 1123677888888888885
No 387
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=24.64 E-value=1.3e+02 Score=24.40 Aligned_cols=111 Identities=9% Similarity=-0.023 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHhcCCcceEEEee-----CHH---HHHHHHhhccCCeEEEEEEe---cC-CCch-hhhHhhhhcCceEee
Q 028497 72 GLAKDILSVIERTKCYNCLVWAK-----SDN---LVRDIMRLSSNVTAGYIIMV---DP-STGF-RTNLLRIRKAGVVGV 138 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf-----~~~---~l~~l~~~~p~~~~~~l~~~---~~-~~~~-~~~~~~~~~~~~~~~ 138 (208)
.+...+.+..++.|. -..+.|. +++ ..+.+|+..|+.++.-.... .+ +... ..+..+..+++.+.+
T Consensus 76 ~in~~la~~a~~~G~-~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~I 154 (368)
T 3vkj_A 76 RINKIIAEVAEKFGI-PMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAV 154 (368)
T ss_dssp HHHHHHHHHHHHHTC-CEECCCCHHHHHCGGGSHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCC-CeeeecchhccCCHHHHhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEE
Confidence 445567777788774 2233332 332 22335667898876544332 11 1111 112223345554443
Q ss_pred ccc------------cc---CHHHHHHHHh-CCCeEEEeeC---CCHHHHHHHHhCCCCEEEcC
Q 028497 139 YHP------------LI---DEKLVRTFHG-RNKRVFAWTV---DDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 139 ~~~------------~~---~~~~v~~~~~-~g~~v~~wtv---~~~~~~~~~~~~gvd~i~TD 183 (208)
+.+ .. ..+.++.+++ -+++|.+=.+ -+++.++.+.+.|||+|.-.
T Consensus 155 hln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 155 HLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTS 218 (368)
T ss_dssp ECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECC
T ss_pred EecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEe
Confidence 321 11 2345666665 4889888544 57899999999999999764
No 388
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=24.64 E-value=2.2e+02 Score=21.16 Aligned_cols=58 Identities=14% Similarity=0.235 Sum_probs=36.5
Q ss_pred HHHHHHHhCCCeEE---Ee--eCC-----CH----HHHHHHHhCCCCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 146 KLVRTFHGRNKRVF---AW--TVD-----DE----DSMRKMLHERVDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 146 ~~v~~~~~~g~~v~---~w--tv~-----~~----~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
.+.+.++++|+.+. ++ ..+ +. ..++.+++.++++|++-+-..+..+++..+ +.|..+|
T Consensus 143 gf~~~l~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ai~~~~d~~a~g~~~al~----~~g~~vP 214 (288)
T 2qu7_A 143 GYNKAISEFDLNVNPSLIHYSDQQLGTNAQIYSGYEATKTLLSKGIKGIVATNHLLLLGALQAIK----ESEKEIK 214 (288)
T ss_dssp HHHHHHHHTTCCCCGGGEEECCSSCSHHHHHHHHHHHHHHHHHTTCCEEEECSHHHHHHHHHHHH----HSSCCBT
T ss_pred HHHHHHHHcCCCCCcceEEeccCCccccCCHHHHHHHHHHHHhcCCCEEEECCcHHHHHHHHHHH----HhCCCCC
Confidence 35667788898652 22 222 22 235566655899999988777777776554 5666655
No 389
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=24.60 E-value=1.1e+02 Score=22.89 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=25.2
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhC
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHE 175 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~ 175 (208)
.+.+++++++|+++.+=|.+....+...+..
T Consensus 27 ~~~l~~l~~~g~~~~iaTGR~~~~~~~~l~~ 57 (246)
T 3f9r_A 27 RALIKRARGAGFCVGTVGGSDFAKQVEQLGR 57 (246)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHCT
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHhhh
Confidence 3567888999999999999998877776654
No 390
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=24.48 E-value=80 Score=23.83 Aligned_cols=17 Identities=6% Similarity=-0.035 Sum_probs=9.2
Q ss_pred HHHHHHHHhCCCeEEEe
Q 028497 145 EKLVRTFHGRNKRVFAW 161 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~w 161 (208)
...++.+..+++.-.+.
T Consensus 56 ~~~~~~l~~~~vdgiIi 72 (289)
T 3k9c_A 56 KVAVQALMRERCEAAIL 72 (289)
T ss_dssp HHHHHHHTTTTEEEEEE
T ss_pred HHHHHHHHhCCCCEEEE
Confidence 34566666666654443
No 391
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=24.33 E-value=88 Score=23.25 Aligned_cols=34 Identities=3% Similarity=0.010 Sum_probs=26.6
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCC
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSMRKML-HERV 177 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gv 177 (208)
+.+.++.++++|+++.+-|.+....+..++ .+|.
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~ 56 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEV 56 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 467788999999999999999877766654 3454
No 392
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=24.33 E-value=2.3e+02 Score=21.33 Aligned_cols=53 Identities=13% Similarity=0.081 Sum_probs=36.9
Q ss_pred hhhcCceEeecccccCHHHHHHHH-hCCCeEEEee-CC--CHHH----HHHHHhCCCCEEEc
Q 028497 129 RIRKAGVVGVYHPLIDEKLVRTFH-GRNKRVFAWT-VD--DEDS----MRKMLHERVDAVVT 182 (208)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~v~~wt-v~--~~~~----~~~~~~~gvd~i~T 182 (208)
...|++++.+.++ .+.+.++.+. ..++++.+-+ ++ +.++ +..+++.|++|+..
T Consensus 176 ~~~Gad~i~~~~~-~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 176 AELGADIVKTSYT-GDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HHTTCSEEEECCC-SSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHcCCCEEEECCC-CCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 3478998877653 5667777665 4678887764 55 3555 66667899999864
No 393
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=24.32 E-value=92 Score=24.61 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=34.8
Q ss_pred HHHHHHHHhC-C--CeEEE--ee-----CCC-HHHHHHHH---hCCCCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 145 EKLVRTFHGR-N--KRVFA--WT-----VDD-EDSMRKML---HERVDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 145 ~~~v~~~~~~-g--~~v~~--wt-----v~~-~~~~~~~~---~~gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
.++++.+++. | ..+.+ |- ..+ ..+++++. +.|+|.+||=.--....+. ++.+.|...|...|
T Consensus 128 ~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~-~f~~~~r~~Gi~vP 203 (310)
T 3apt_A 128 AELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLDFAITQLFFNNAHYF-GFLERARRAGIGIP 203 (310)
T ss_dssp HHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCSEEEECCCSCHHHHH-HHHHHHHHTTCCSC
T ss_pred HHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEecccCCHHHHH-HHHHHHHHcCCCCe
Confidence 4677777665 5 34433 32 112 23566554 6899999998433333222 34446667776554
No 394
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=24.14 E-value=2e+02 Score=20.52 Aligned_cols=90 Identities=10% Similarity=0.076 Sum_probs=53.9
Q ss_pred HHHHHHHHHhcCCcceEEEee-----CHHHHHHHHhhccCCeEEEEEEecCCCc--hh----hhHh-------hhhcC--
Q 028497 74 AKDILSVIERTKCYNCLVWAK-----SDNLVRDIMRLSSNVTAGYIIMVDPSTG--FR----TNLL-------RIRKA-- 133 (208)
Q Consensus 74 ~~~v~~~l~~~~~~~~ii~Sf-----~~~~l~~l~~~~p~~~~~~l~~~~~~~~--~~----~~~~-------~~~~~-- 133 (208)
...++++++++++.-..|... +++.++++.+ ....+|-=...++... .. .++. +..|.
T Consensus 19 ~~~il~iL~~~~v~aTfFv~g~~~~~~~~~~~~~~~--~GheIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~G~~~ 96 (195)
T 2cc0_A 19 TQSLLNALRQNGLRATMFNQGQYAAQNPSLVRAQVD--AGMWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGGGTP 96 (195)
T ss_dssp HHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHH--TTCEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHcCCCEEEEecChhhhhCHHHHHHHHH--CCCEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 678899999999865555432 5566777765 3355542211222110 11 1111 22332
Q ss_pred ceEeecccccCHHHHHHHHhCCCeEEEeeCCC
Q 028497 134 GVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDD 165 (208)
Q Consensus 134 ~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~ 165 (208)
.++.+.+...++...+.+++.|+.+..|++++
T Consensus 97 ~~fr~P~G~~~~~~~~~~~~~G~~~v~w~~d~ 128 (195)
T 2cc0_A 97 KLFRPPYGETNATLRSVEAKYGLTEVIWDVDS 128 (195)
T ss_dssp SEECCGGGCCCHHHHHHHHHTTCEECCCSEEC
T ss_pred CEEECCCCCcCHHHHHHHHHCCCeEEEeccCC
Confidence 44555566678888999999999999998754
No 395
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=24.10 E-value=1.6e+02 Score=21.79 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHhcCCcceEEEeeCHHHHHHHHhhccC
Q 028497 72 GLAKDILSVIERTKCYNCLVWAKSDNLVRDIMRLSSN 108 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~Sf~~~~l~~l~~~~p~ 108 (208)
.++..++++.++.|..-.+.....++.++.+|+..|+
T Consensus 115 ~~v~~~a~~a~~~G~~GvV~sat~~~e~~~ir~~~~~ 151 (215)
T 3ve9_A 115 AFYPYLREVARRVNPKGFVAPATRPSMISRVKGDFPD 151 (215)
T ss_dssp GGHHHHHHHHHHHCCSEEECCTTSHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCCceeeCCCCHHHHHHHHHhCCC
Confidence 4566666666666643333333456667777777766
No 396
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=24.10 E-value=1.2e+02 Score=23.38 Aligned_cols=36 Identities=17% Similarity=0.415 Sum_probs=27.6
Q ss_pred HHHHHHHhC-CCeEEE-eeCCCHHHHHHHHhCCCCEEEc
Q 028497 146 KLVRTFHGR-NKRVFA-WTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 146 ~~v~~~~~~-g~~v~~-wtv~~~~~~~~~~~~gvd~i~T 182 (208)
++++++++. ++++.+ +++.++++++.+.+ ++||++.
T Consensus 189 ~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIV 226 (252)
T 3tha_A 189 DKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIV 226 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEE
T ss_pred HHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEE
Confidence 467777765 567765 67899999998877 5999975
No 397
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=24.08 E-value=1.9e+02 Score=21.56 Aligned_cols=60 Identities=13% Similarity=0.213 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCeEEEeeCCC-----HHHHHH--HHhCC--CCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 145 EKLVRTFHGRNKRVFAWTVDD-----EDSMRK--MLHER--VDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~-----~~~~~~--~~~~g--vd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
..+.+.++++|+++.++..+. ...++. +++.+ +++|++-+-..+..+++..+ +.|..+|+
T Consensus 144 ~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~A~g~~~al~----~~g~~vP~ 212 (285)
T 3c3k_A 144 SGYLNRLKFHGLDYSRISYAENLDYMAGKLATFSLLKSAVKPDAIFAISDVLAAGAIQALT----ESGLSIPQ 212 (285)
T ss_dssp HHHHHHHHHHTCCCCEEEECSSSSHHHHHHHHHHHHSSSSCCSEEEESSHHHHHHHHHHHH----HTTCCTTT
T ss_pred HHHHHHHHHcCCCceEeecCCChHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHHH----HcCCCCCC
No 398
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=24.04 E-value=2.2e+02 Score=20.97 Aligned_cols=36 Identities=6% Similarity=-0.094 Sum_probs=24.3
Q ss_pred HHHHHhCCCeEEEeeC---CC-----HHHHHHHHhCCCCEEEcC
Q 028497 148 VRTFHGRNKRVFAWTV---DD-----EDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv---~~-----~~~~~~~~~~gvd~i~TD 183 (208)
.+++.++|++++++.. ++ ++..+.+.+.++|.|++=
T Consensus 43 ~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a 86 (209)
T 1meo_A 43 LDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLA 86 (209)
T ss_dssp HHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCCCEEEEc
Confidence 4778889999887753 33 223455567788888764
No 399
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=23.93 E-value=1.1e+02 Score=24.60 Aligned_cols=37 Identities=5% Similarity=0.018 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
-.++.++..|.+|++-. .+++..+.+.++|++.++.-
T Consensus 187 ~a~q~a~~~Ga~Vi~~~-~~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 187 MLNQICLKDGIKLVNIV-RKQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp HHHHHHHHHTCCEEEEE-SSHHHHHHHHHTTCSCEEET
T ss_pred HHHHHHHHCCCEEEEEE-CCHHHHHHHHhCCCcEEEeC
Confidence 45677778888765543 46677778888998876643
No 400
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=23.81 E-value=1.2e+02 Score=23.96 Aligned_cols=38 Identities=13% Similarity=0.084 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCEEEcC------ChHHHHHHHHHHHhhhhhcCcc
Q 028497 168 SMRKMLHERVDAVVTS------NPILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 168 ~~~~~~~~gvd~i~TD------~P~~~~~~~~~~~~~~~~~~~~ 205 (208)
+++.++++|+|+|... ......+-+.+..+.|.+.|+.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~Glp 173 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMP 173 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCE
Confidence 5677788888877632 3334555566778888888754
No 401
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=23.77 E-value=2.9e+02 Score=22.28 Aligned_cols=90 Identities=13% Similarity=0.039 Sum_probs=54.5
Q ss_pred eCHHHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeec-cc--c-----cCHHHHHHHHh---CCCeEEEe-
Q 028497 94 KSDNLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVY-HP--L-----IDEKLVRTFHG---RNKRVFAW- 161 (208)
Q Consensus 94 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~-----~~~~~v~~~~~---~g~~v~~w- 161 (208)
.+++.++++++.. +.|+.+-....+ .....+...|++++.+. +. . .+.+.+..+.+ ..++|+.-
T Consensus 204 ~~w~~i~~lr~~~-~~PvivK~v~~~---e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~G 279 (352)
T 3sgz_A 204 FCWNDLSLLQSIT-RLPIILKGILTK---EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDG 279 (352)
T ss_dssp CCHHHHHHHHHHC-CSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEES
T ss_pred CCHHHHHHHHHhc-CCCEEEEecCcH---HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEEC
Confidence 4567888888864 566643222111 11122344788887652 11 1 12233443322 25777765
Q ss_pred eCCCHHHHHHHHhCCCCEEEcCChHH
Q 028497 162 TVDDEDSMRKMLHERVDAVVTSNPIL 187 (208)
Q Consensus 162 tv~~~~~~~~~~~~gvd~i~TD~P~~ 187 (208)
++.+..++.+++.+|+++|..-.|-.
T Consensus 280 GI~~g~Dv~kaLalGA~aV~iGr~~l 305 (352)
T 3sgz_A 280 GVRTGTDVLKALALGARCIFLGRPIL 305 (352)
T ss_dssp SCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 57899999999999999999887765
No 402
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=23.66 E-value=1.8e+02 Score=21.61 Aligned_cols=58 Identities=14% Similarity=0.275 Sum_probs=36.9
Q ss_pred HHHHHHHhCCCeE-----EEeeCCC-----HHHHHHHHhC--C--CCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 146 KLVRTFHGRNKRV-----FAWTVDD-----EDSMRKMLHE--R--VDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 146 ~~v~~~~~~g~~v-----~~wtv~~-----~~~~~~~~~~--g--vd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
.+.+.++++|+.+ ..+...+ ...++.+++. . +++|++-+-..+..+++..+ +.|..+|
T Consensus 157 gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~~~d~~a~g~~~al~----~~g~~vP 228 (298)
T 3tb6_A 157 GFIQAHRERELFPSPDMIVTFTTEEKESKLLEKVKATLEKNSKHMPTAILCYNDEIALKVIDMLR----EMDLKVP 228 (298)
T ss_dssp HHHHHHHHTTCCCCGGGEEEECHHHHTTHHHHHHHHHHHHTTTSCCSEEECSSHHHHHHHHHHHH----HTTCCTT
T ss_pred HHHHHHHHcCCCCCcceEEEecccchhhhHHHHHHHHHhcCCCCCCeEEEEeCcHHHHHHHHHHH----HcCCCCC
Confidence 3567788888864 2222211 3456666654 2 89999988887777777665 5565555
No 403
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=23.53 E-value=64 Score=24.57 Aligned_cols=37 Identities=19% Similarity=0.396 Sum_probs=27.8
Q ss_pred HHHHHHhCCCeEEE--eeCCCHHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNKRVFA--WTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~~v~~--wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
.-+.+.+.|+.+.. |.-+..+-++.+++.|.+.+|+-
T Consensus 108 ~e~vc~~~gl~~~~PLW~~d~~~Ll~e~i~~G~~aiiv~ 146 (237)
T 3rjz_A 108 IEKVAKELGLEVYTPAWGRDAKEYMRELLNLGFKIMVVG 146 (237)
T ss_dssp HHHHHHHTTCEEECSSSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCEEEccccCCCHHHHHHHHHHCCCEEEEEE
Confidence 34456778888764 77777888888888888888764
No 404
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=23.41 E-value=1.3e+02 Score=22.33 Aligned_cols=36 Identities=17% Similarity=0.072 Sum_probs=25.1
Q ss_pred HHHHHhCCCeEEEeeC---CCHHHHHHHHhCCCCEEEcC
Q 028497 148 VRTFHGRNKRVFAWTV---DDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 148 v~~~~~~g~~v~~wtv---~~~~~~~~~~~~gvd~i~TD 183 (208)
.+.++++|++++++.. ++++-.+.+.+.++|.|+.=
T Consensus 51 l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dlivla 89 (215)
T 3kcq_A 51 LLIAQSYGIPTFVVKRKPLDIEHISTVLREHDVDLVCLA 89 (215)
T ss_dssp HHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEeCcccCChHHHHHHHHHhCCCEEEEe
Confidence 4677888888887653 33555666677888888764
No 405
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=23.35 E-value=1e+02 Score=26.33 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=42.5
Q ss_pred cCHHHHHHHHhCCCeEEEee------CC----CH---HHHHHHHhCCCCEEEc-------CChHHHHHHHHHHHhhhh
Q 028497 143 IDEKLVRTFHGRNKRVFAWT------VD----DE---DSMRKMLHERVDAVVT-------SNPILFQRVMQDIRTQCL 200 (208)
Q Consensus 143 ~~~~~v~~~~~~g~~v~~wt------v~----~~---~~~~~~~~~gvd~i~T-------D~P~~~~~~~~~~~~~~~ 200 (208)
....++..++.+|+++.+-| +. +. .+...++..|+|+|+- .||.++.+.+.+.....+
T Consensus 279 aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE 356 (500)
T 1a3w_A 279 VQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAE 356 (500)
T ss_dssp HHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhh
Confidence 34567889999999998744 11 12 2677888899999984 599999999887644433
No 406
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=23.33 E-value=1.6e+02 Score=21.74 Aligned_cols=66 Identities=11% Similarity=0.043 Sum_probs=43.0
Q ss_pred hhcCceEeecccccCHHHHHHHHhCCCeEEEee-CCCHHHHHHHHhCCCCEEEcCChHHHHHHHHHHHh
Q 028497 130 IRKAGVVGVYHPLIDEKLVRTFHGRNKRVFAWT-VDDEDSMRKMLHERVDAVVTSNPILFQRVMQDIRT 197 (208)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~v~~~~~~g~~v~~wt-v~~~~~~~~~~~~gvd~i~TD~P~~~~~~~~~~~~ 197 (208)
...+|.+-........+.++.+.+.|+++.+.. .++.+++...+.. =|-+++.++.+.++++++..
T Consensus 57 ~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~--lg~~~g~~~~A~~l~~~~~~ 123 (255)
T 3md9_A 57 AMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINA--VATALHQTEKGQKLIEDYQQ 123 (255)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHH--HHHHHTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHH--HHHHhCCHHHHHHHHHHHHH
Confidence 377887655443334678899999999998775 3555555444321 13456778888888776543
No 407
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=23.30 E-value=2.6e+02 Score=21.50 Aligned_cols=56 Identities=11% Similarity=-0.004 Sum_probs=39.0
Q ss_pred hhhcCceEeecccccC------HHHHHHHHhCCCeEEEe-eCCCH------------HHHHHHHhCCCCEEEcCC
Q 028497 129 RIRKAGVVGVYHPLID------EKLVRTFHGRNKRVFAW-TVDDE------------DSMRKMLHERVDAVVTSN 184 (208)
Q Consensus 129 ~~~~~~~~~~~~~~~~------~~~v~~~~~~g~~v~~w-tv~~~------------~~~~~~~~~gvd~i~TD~ 184 (208)
+..|.+.+-+...+++ .++++.+++.|++|..= +..+. +.+++.++.|++.||.+-
T Consensus 95 k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEa 169 (251)
T 1qwg_A 95 EKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEG 169 (251)
T ss_dssp HHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 5578887776554432 35789999999999663 22222 356777899999999875
No 408
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=23.19 E-value=1.5e+02 Score=25.41 Aligned_cols=59 Identities=15% Similarity=0.172 Sum_probs=44.9
Q ss_pred ccCHHHHHHHHhCCCeEEEee------CCC-------HHHHHHHHhCCCCEEEc-------CChHHHHHHHHHHHhhhh
Q 028497 142 LIDEKLVRTFHGRNKRVFAWT------VDD-------EDSMRKMLHERVDAVVT-------SNPILFQRVMQDIRTQCL 200 (208)
Q Consensus 142 ~~~~~~v~~~~~~g~~v~~wt------v~~-------~~~~~~~~~~gvd~i~T-------D~P~~~~~~~~~~~~~~~ 200 (208)
.+.+.+++.++.+|++|.+-| +++ ..++..++--|+|+|+- .||..+.+.+.+.....+
T Consensus 308 ~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE 386 (526)
T 4drs_A 308 VAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAE 386 (526)
T ss_dssp HHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHh
Confidence 455788999999999999876 222 24677777789999975 499999999887644443
No 409
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=23.19 E-value=2e+02 Score=20.36 Aligned_cols=41 Identities=5% Similarity=0.031 Sum_probs=29.1
Q ss_pred CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC---ChHHHHHHHHHH
Q 028497 155 NKRVFAWTVD-DEDSMRKMLHERVDAVVTS---NPILFQRVMQDI 195 (208)
Q Consensus 155 g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD---~P~~~~~~~~~~ 195 (208)
+.++.+.|.. +.+....+++.|++++++- .+..+.+.++..
T Consensus 68 ~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~~L~~~i~~~ 112 (223)
T 2hqr_A 68 SIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEAR 112 (223)
T ss_dssp TSEEEEEESSCCHHHHHHHHHHTCSEEEETTCSCTHHHHHHHHHH
T ss_pred CCcEEEEECCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHH
Confidence 6788887764 5677788889999998864 455566555543
No 410
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=23.14 E-value=2.7e+02 Score=21.77 Aligned_cols=81 Identities=14% Similarity=0.075 Sum_probs=50.4
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHG---RNKRVFAWTVDDEDSMRKML 173 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~g~~v~~wtv~~~~~~~~~~ 173 (208)
++++++|+..|..++..-... . .-. .+.. ..|++++-... ++++.++.+.+ ...++.+=+--+.+.+..+.
T Consensus 187 ~Av~~ar~~~~~~~IeVEv~t-l-~ea-~eAl-~aGaD~I~LDn--~~~~~l~~av~~~~~~v~ieaSGGIt~~~i~~~a 260 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEVEVTN-L-DEL-NQAI-AAKADIVMLDN--FSGEDIDIAVSIARGKVALEVSGNIDRNSIVAIA 260 (287)
T ss_dssp HHHHHHHHHCTTSCEEEEESS-H-HHH-HHHH-HTTCSEEEEES--CCHHHHHHHHHHHTTTCEEEEESSCCTTTHHHHH
T ss_pred HHHHHHHhhCCCCcEEEEeCC-H-HHH-HHHH-HcCCCEEEEcC--CCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHH
Confidence 567888887788777654431 1 101 1122 26788765533 45555554332 35667666656788899999
Q ss_pred hCCCCEEEcC
Q 028497 174 HERVDAVVTS 183 (208)
Q Consensus 174 ~~gvd~i~TD 183 (208)
+.|||+|-+-
T Consensus 261 ~tGVD~IsvG 270 (287)
T 3tqv_A 261 KTGVDFISVG 270 (287)
T ss_dssp TTTCSEEECS
T ss_pred HcCCCEEEEC
Confidence 9999999763
No 411
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=23.09 E-value=1.7e+02 Score=22.59 Aligned_cols=15 Identities=7% Similarity=0.297 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhcCC
Q 028497 72 GLAKDILSVIERTKC 86 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~ 86 (208)
..-+++.+.+++.|+
T Consensus 34 ~tr~rV~~~~~~lgY 48 (339)
T 3h5o_A 34 QLREKVMQAVDALAY 48 (339)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHHHhCC
Confidence 344556666666553
No 412
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=23.09 E-value=2.3e+02 Score=21.88 Aligned_cols=52 Identities=15% Similarity=0.218 Sum_probs=36.2
Q ss_pred HHHHHHHHhCCCeEEE---eeC---CCHHHHHHHHhCCCCEEEc-CChHHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFA---WTV---DDEDSMRKMLHERVDAVVT-SNPILFQRVMQDIR 196 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~---wtv---~~~~~~~~~~~~gvd~i~T-D~P~~~~~~~~~~~ 196 (208)
..+.+.+.++|+++.. +.. +-...+.++.+.++|.|+. ..+..+..+++..+
T Consensus 159 ~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~ 217 (364)
T 3lop_A 159 TGVERTLKAHALAITAMASYPRNTANVGPAVDKLLAADVQAIFLGATAEPAAQFVRQYR 217 (364)
T ss_dssp HHHHHHHHTTTCCCSEEEEECTTSCCCHHHHHHHHHSCCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEEecCCCccHHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHH
Confidence 3456678889988632 222 2256788888899999887 67777777777665
No 413
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=22.97 E-value=1.1e+02 Score=24.50 Aligned_cols=63 Identities=5% Similarity=0.058 Sum_probs=42.7
Q ss_pred hcCceEee---cccccCHH------------HHHHHH-hC------CCeEEEeeCCCHHHHHHHHhCCCCEEEcCChHHH
Q 028497 131 RKAGVVGV---YHPLIDEK------------LVRTFH-GR------NKRVFAWTVDDEDSMRKMLHERVDAVVTSNPILF 188 (208)
Q Consensus 131 ~~~~~~~~---~~~~~~~~------------~v~~~~-~~------g~~v~~wtv~~~~~~~~~~~~gvd~i~TD~P~~~ 188 (208)
.|++.+.+ +...++++ +++.++ +. |+++..++.++..-+..+.+.|+|+|-.|.-..+
T Consensus 209 aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~~~~l~~l~~~g~d~i~~d~~~dl 288 (367)
T 1r3s_A 209 AGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAP 288 (367)
T ss_dssp TTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTTSCH
T ss_pred hCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCcHHHHHHHHhcCCCEEEeCCCCCH
Confidence 57776553 33345543 355677 55 6899999888877788888999999988854444
Q ss_pred HHHHH
Q 028497 189 QRVMQ 193 (208)
Q Consensus 189 ~~~~~ 193 (208)
.++.+
T Consensus 289 ~~a~~ 293 (367)
T 1r3s_A 289 KKARE 293 (367)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 414
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=22.92 E-value=2.3e+02 Score=20.84 Aligned_cols=37 Identities=14% Similarity=0.253 Sum_probs=26.6
Q ss_pred HHHHHHhC--CCeEEE-eeCCCHHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGR--NKRVFA-WTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~--g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
..+.++.. ++++.+ .+++++++.+.+.+.|+||++.-
T Consensus 160 ~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVG 199 (219)
T 2h6r_A 160 TVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLA 199 (219)
T ss_dssp HHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEES
T ss_pred HHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEc
Confidence 34444443 566543 56899999999999999999853
No 415
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=22.88 E-value=2.6e+02 Score=21.37 Aligned_cols=59 Identities=12% Similarity=0.177 Sum_probs=38.7
Q ss_pred HHHHHHHHhCCCeEE-E--eeC---CCHHHHHHHHhCCCCEEEcCC-hHHHHHHHHHHHhhhhhcCcccc
Q 028497 145 EKLVRTFHGRNKRVF-A--WTV---DDEDSMRKMLHERVDAVVTSN-PILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~-~--wtv---~~~~~~~~~~~~gvd~i~TD~-P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
..+.+.+.++|+.+. . +.. +-...+.++.+.++|+|+.-. ...+..+++..+ +.|+..|
T Consensus 153 ~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~~~dav~~~~~~~~a~~~~~~~~----~~g~~~p 218 (362)
T 3snr_A 153 NDLKKQGEAMGLKIVGEERFARPDTSVAGQALKLVAANPDAILVGASGTAAALPQTTLR----ERGYNGL 218 (362)
T ss_dssp HHHHHHHHHTTCEEEEEEEECTTCSCCHHHHHHHHHHCCSEEEEECCHHHHHHHHHHHH----HTTCCSE
T ss_pred HHHHHHHHHcCCEEEEEeecCCCCCCHHHHHHHHHhcCCCEEEEecCcchHHHHHHHHH----HcCCCcc
Confidence 345667889999864 2 222 224577888888999987654 777777777655 4555443
No 416
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=22.87 E-value=1.6e+02 Score=18.96 Aligned_cols=48 Identities=10% Similarity=0.138 Sum_probs=31.9
Q ss_pred HHHHHHh--CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 147 LVRTFHG--RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 147 ~v~~~~~--~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
+++.+++ .+.++.+.+.. +.+....+++.|++++++- .+..+.+.++.
T Consensus 65 ~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~ 117 (142)
T 2qxy_A 65 LIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERVKK 117 (142)
T ss_dssp HHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHHHH
Confidence 3444443 35788887764 4667888899999988875 45555555554
No 417
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=22.86 E-value=2.3e+02 Score=21.19 Aligned_cols=23 Identities=4% Similarity=0.018 Sum_probs=9.9
Q ss_pred HHhCCCeEEEeeCCCHHHHHHHH
Q 028497 151 FHGRNKRVFAWTVDDEDSMRKML 173 (208)
Q Consensus 151 ~~~~g~~v~~wtv~~~~~~~~~~ 173 (208)
+...|...+..-+.++++++.++
T Consensus 68 ~~~~~~~~~~~Dv~~~~~v~~~~ 90 (260)
T 3gem_A 68 LRQAGAVALYGDFSCETGIMAFI 90 (260)
T ss_dssp HHHHTCEEEECCTTSHHHHHHHH
T ss_pred HHhcCCeEEECCCCCHHHHHHHH
Confidence 33334433333344555544444
No 418
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=22.78 E-value=1.8e+02 Score=21.68 Aligned_cols=8 Identities=25% Similarity=0.418 Sum_probs=4.2
Q ss_pred CeEEEEEE
Q 028497 109 VTAGYIIM 116 (208)
Q Consensus 109 ~~~~~l~~ 116 (208)
..+|++..
T Consensus 21 ~~Ig~i~~ 28 (293)
T 2iks_A 21 RSIGLVIP 28 (293)
T ss_dssp CEEEEEES
T ss_pred cEEEEEeC
Confidence 44565553
No 419
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=22.75 E-value=1.5e+02 Score=18.71 Aligned_cols=50 Identities=10% Similarity=0.126 Sum_probs=32.9
Q ss_pred HHHHHHHhC--CCeEEEeeCCCH------HHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVDDE------DSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~~------~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++. ..++.+.+..+. +....+.+.|++++++- .+..+.+.+++.
T Consensus 63 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~l~~~ 122 (135)
T 3eqz_A 63 EVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTKPINTEVLTCFLTSL 122 (135)
T ss_dssp HHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCCCCCHHHHHHHHHHH
Confidence 456666654 567778887665 55666788899888875 455555555543
No 420
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=22.70 E-value=1.7e+02 Score=21.85 Aligned_cols=40 Identities=15% Similarity=0.102 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHhcCC--cceEEEe--eCHHHHHHHHhhccCCeE
Q 028497 72 GLAKDILSVIERTKC--YNCLVWA--KSDNLVRDIMRLSSNVTA 111 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~--~~~ii~S--f~~~~l~~l~~~~p~~~~ 111 (208)
......++.+++.|. .+..+.+ ..++.++++.+.+|++++
T Consensus 143 ~T~~~ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~~~~P~v~i 186 (217)
T 3dmp_A 143 YSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQDAHPDVKL 186 (217)
T ss_dssp HHHHHHHHHHHTTTCCGGGEEEECSEECHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHcCCCcCeEEEEEEEeCHHHHHHHHHHCCCCEE
Confidence 455667788889897 4544443 478899999999999886
No 421
>3qe9_Y Exonuclease 1; exonuclease, hydrolase-DNA complex; HET: DNA; 2.51A {Homo sapiens} PDB: 3qeb_Z* 3qea_Z*
Probab=22.63 E-value=1.2e+02 Score=24.42 Aligned_cols=44 Identities=11% Similarity=0.273 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhCC-CCEEEcCChHHH
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHER-VDAVVTSNPILF 188 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~g-vd~i~TD~P~~~ 188 (208)
+.+.+.++..|+++.+=...-.+.+..+.+.| +++|+|.+-+.+
T Consensus 131 ~~i~~~L~~~gIp~i~ap~EADaqiA~La~~g~~~~I~S~D~Dll 175 (352)
T 3qe9_Y 131 HKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSALL 175 (352)
T ss_dssp HHHHHHHHHTTCEEEECSSCHHHHHHHHHHTTSCSEEECSCGGGG
T ss_pred HHHHHHHHHcCCcEEECCcchHHHHHHHHHCCCeEEEEeCCcCcc
Confidence 34566678899998874432244566666666 789998776654
No 422
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=22.60 E-value=2.2e+02 Score=24.38 Aligned_cols=57 Identities=16% Similarity=0.243 Sum_probs=42.8
Q ss_pred ccCHHHHHHHHhCCCeEEEee------CCC-------HHHHHHHHhCCCCEEEc-------CChHHHHHHHHHHHhh
Q 028497 142 LIDEKLVRTFHGRNKRVFAWT------VDD-------EDSMRKMLHERVDAVVT-------SNPILFQRVMQDIRTQ 198 (208)
Q Consensus 142 ~~~~~~v~~~~~~g~~v~~wt------v~~-------~~~~~~~~~~gvd~i~T-------D~P~~~~~~~~~~~~~ 198 (208)
.+.+.+++.++.+|++|.+=| +++ ..+...++--|+|+|+- +||.++.+.+.+....
T Consensus 293 ~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~ 369 (511)
T 3gg8_A 293 LAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYE 369 (511)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHH
Confidence 345678999999999998865 121 24667778889999965 6999999988865433
No 423
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=22.59 E-value=2.3e+02 Score=20.75 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=36.8
Q ss_pred HHHHHHhCCCeEE----EeeCCCH----HHHHHHHhCC--CCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 147 LVRTFHGRNKRVF----AWTVDDE----DSMRKMLHER--VDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 147 ~v~~~~~~g~~v~----~wtv~~~----~~~~~~~~~g--vd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
+.+.++++|+.+. .++-.+. ..++.+++.+ +++|++-+-..+..+++..+ +.|..+|
T Consensus 141 f~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~----~~g~~vP 207 (276)
T 2h0a_A 141 FQEALKEAGRPFSPDRLYITRHSQEGGRLALRHFLEKASPPLNVFAGADQVALGVLEEAV----RLGLTPG 207 (276)
T ss_dssp HHHHHHHTTCCCCGGGEEEECSSHHHHHHHHHHHHTTCCSSEEEECSSHHHHHHHHHHHH----TTSCTTT
T ss_pred HHHHHHHcCCCCChHHeeecCCChHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHH----HcCCCCC
Confidence 4566788888642 2222232 3456667654 89999988888777776555 5666655
No 424
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=22.57 E-value=1.5e+02 Score=20.94 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=24.6
Q ss_pred HHHHHHHHhCCCeEEEee-C-CCHHHHHH----HHhC-CCCEEEc
Q 028497 145 EKLVRTFHGRNKRVFAWT-V-DDEDSMRK----MLHE-RVDAVVT 182 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt-v-~~~~~~~~----~~~~-gvd~i~T 182 (208)
+.+.+.+.+.|..+...+ + |+.+.+.. +.+. ++|.|+|
T Consensus 31 ~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVit 75 (172)
T 1mkz_A 31 HYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLI 75 (172)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEE
T ss_pred HHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEe
Confidence 456677888999876553 3 56555444 3343 5888887
No 425
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=22.55 E-value=99 Score=25.73 Aligned_cols=55 Identities=11% Similarity=0.141 Sum_probs=33.8
Q ss_pred CHHHHHHHHhcC-----CceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceE--EEeeCHHHHHHHH
Q 028497 43 TIEDALTLVSNS-----VRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCL--VWAKSDNLVRDIM 103 (208)
Q Consensus 43 tL~evL~~~~~~-----~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~i--i~Sf~~~~l~~l~ 103 (208)
.|.++++.+... ...+.+|.-... +.+..++.+++.|..+.. +.|++++.++.+.
T Consensus 122 ~l~~ll~~i~~~~~~~~~~eitie~~p~~------l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~ 183 (457)
T 1olt_A 122 QISRLMKLLRENFQFNADAEISIEVDPRE------IELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVN 183 (457)
T ss_dssp HHHHHHHHHHHHSCEEEEEEEEEEECSSS------CCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEccCc------CCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhC
Confidence 467777777652 135566664432 234567888898875543 5888877655443
No 426
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=22.48 E-value=2.4e+02 Score=20.95 Aligned_cols=59 Identities=14% Similarity=0.140 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCeEEE-eeC---CCH----HHHHHHHhC--CCCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 146 KLVRTFHGRNKRVFA-WTV---DDE----DSMRKMLHE--RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~-wtv---~~~----~~~~~~~~~--gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
.+.+.++++|+.+.. |.. .+. +.++.+++. .+++|++-+-..+..+++..+ +.|..+|+
T Consensus 148 gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~A~g~~~al~----~~g~~vP~ 216 (288)
T 3gv0_A 148 GFNRGIRDFGLTEFPIDAVTIETPLEKIRDFGQRLMQSSDRPDGIVSISGSSTIALVAGFE----AAGVKIGE 216 (288)
T ss_dssp HHHHHHHHTTCEECCCCSCCTTSCHHHHHHHHHHHTTSSSCCSEEEESCHHHHHHHHHHHH----TTTCCTTT
T ss_pred HHHHHHHHcCCCcchhheeccccchHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHH----HcCCCCCC
Confidence 456778899987643 211 222 346666655 489999988777777776655 66666653
No 427
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=22.46 E-value=1.8e+02 Score=21.54 Aligned_cols=9 Identities=22% Similarity=0.464 Sum_probs=5.5
Q ss_pred CCeEEEEEE
Q 028497 108 NVTAGYIIM 116 (208)
Q Consensus 108 ~~~~~~l~~ 116 (208)
...+|++..
T Consensus 19 ~~~Ig~i~~ 27 (296)
T 3brq_A 19 TQTLGLVVT 27 (296)
T ss_dssp CCEEEEEEC
T ss_pred CceEEEEeC
Confidence 456777664
No 428
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=22.39 E-value=1.4e+02 Score=23.48 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=25.6
Q ss_pred HHHHHHHhCCC-eEEEeeCCCHHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGRNK-RVFAWTVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~-~v~~wtv~~~~~~~~~~~~gvd~i~TD 183 (208)
-.++.++..|. .|.+ +..+++..+.+.++|++.++..
T Consensus 181 ~a~qla~~~Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~ 218 (352)
T 3fpc_A 181 MSVAGANHLGAGRIFA-VGSRKHCCDIALEYGATDIINY 218 (352)
T ss_dssp HHHHHHHTTTCSSEEE-ECCCHHHHHHHHHHTCCEEECG
T ss_pred HHHHHHHHcCCcEEEE-ECCCHHHHHHHHHhCCceEEcC
Confidence 35777888887 5666 3345666777788888877643
No 429
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=22.39 E-value=1.7e+02 Score=21.55 Aligned_cols=37 Identities=11% Similarity=0.050 Sum_probs=26.1
Q ss_pred HHHHHHhCCCeEEEeeC---CC-----HHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNKRVFAWTV---DD-----EDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv---~~-----~~~~~~~~~~gvd~i~TD 183 (208)
..++++++|++++.+.. ++ ++..+.+.+.++|.|++=
T Consensus 42 ~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a 86 (212)
T 1jkx_A 42 GLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLA 86 (212)
T ss_dssp HHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCCSEEEES
T ss_pred HHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHhcCCCEEEEe
Confidence 35778899999888753 33 344556667899988875
No 430
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=22.36 E-value=1.2e+02 Score=23.22 Aligned_cols=143 Identities=6% Similarity=0.002 Sum_probs=73.1
Q ss_pred CCHHHHHHHHhcCCceEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEe--eCH-------HHHHHHHhhccCCe--
Q 028497 42 TTIEDALTLVSNSVRKVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWA--KSD-------NLVRDIMRLSSNVT-- 110 (208)
Q Consensus 42 ptL~evL~~~~~~~~~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~S--f~~-------~~l~~l~~~~p~~~-- 110 (208)
+.++++++.++..++...+ + ... ..-...+.++.+++. .++.+ .+| +.+..+.++.+++.
T Consensus 14 ~d~~~vl~~a~~~gV~~i~-v-~~~----~~~~~~~~~la~~~~---~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~vaI 84 (254)
T 3gg7_A 14 PDPVAVARACEERQLTVLS-V-TTT----PAAWRGTLALAAGRP---HVWTALGFHPEVVSERAADLPWFDRYLPETRFV 84 (254)
T ss_dssp SSHHHHHHHHHHTTCEEEE-C-CSS----GGGHHHHHGGGTTCT---TEEECBCCCGGGTTTTGGGTHHHHHHGGGCSEE
T ss_pred CCHHHHHHHHHHCCCcEEE-e-cCC----HHHHHHHHHHHHhCC---CeEEEEeeCcccccccHHHHHHHHHHhhhccEE
Confidence 4688999988776544333 4 332 234455666655553 23333 233 23556666555431
Q ss_pred --EEEEEEecCCCc--hhh-------hHhhhhcCceEeecccccCHHHHHHHHhCCCe---EEEeeCCCHHHHHHHHhCC
Q 028497 111 --AGYIIMVDPSTG--FRT-------NLLRIRKAGVVGVYHPLIDEKLVRTFHGRNKR---VFAWTVDDEDSMRKMLHER 176 (208)
Q Consensus 111 --~~~l~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~---v~~wtv~~~~~~~~~~~~g 176 (208)
+|+-+....... ... ++++..+...++++......++++.+++.+.. |.=|.-.+.+.+++++++|
T Consensus 85 GEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~~~~~~il~~~~~~~~~v~H~fsG~~e~a~~~l~~G 164 (254)
T 3gg7_A 85 GEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAESEVLNCLEANPRSGTPILHWYSGSVTELRRAISLG 164 (254)
T ss_dssp EEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHCGGGEEEEEETCCSCHHHHHHHHHTT
T ss_pred EEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcHHHHHHHHHHcCCCCcEEEEeCCCCHHHHHHHHcCC
Confidence 222221100000 000 11233454544466655567777777766432 3334445788888888876
Q ss_pred ----CCEEEcCChHHHHHHHHH
Q 028497 177 ----VDAVVTSNPILFQRVMQD 194 (208)
Q Consensus 177 ----vd~i~TD~P~~~~~~~~~ 194 (208)
+.+.+| +...++++++.
T Consensus 165 ~yis~~g~~~-~~~~~~~~v~~ 185 (254)
T 3gg7_A 165 CWFSVGPTMV-RTQKGAALIRS 185 (254)
T ss_dssp CEEEECHHHH-TSHHHHHHHHH
T ss_pred cEEEECcccC-chHHHHHHHHH
Confidence 444555 55566666654
No 431
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=22.29 E-value=2.1e+02 Score=20.26 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=38.3
Q ss_pred HHHHHHHhCCCeEEEeeCCC---HHHHHHHHhC--CCCEEEcCChHHHHHHHHHH-Hhhhh
Q 028497 146 KLVRTFHGRNKRVFAWTVDD---EDSMRKMLHE--RVDAVVTSNPILFQRVMQDI-RTQCL 200 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~---~~~~~~~~~~--gvd~i~TD~P~~~~~~~~~~-~~~~~ 200 (208)
...+.+++.|+.+++.++.+ .+.++.+-.. |-..+..+.+..+.++++++ ..-|.
T Consensus 137 ~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~~~~~~~~~~~~~~~~L~~~~~~i~~~iC~ 197 (202)
T 1ijb_A 137 RYVQGLKKKKVIVIPVGIGPHANLKQIRLIEKQAPENKAFVLSSVDELEQQRDEIVSYLCD 197 (202)
T ss_dssp HHHHHHHHTTEEEEEEEESTTSCHHHHHHHHHHCTTCCCEEESSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEecCCcCCHHHHHHHhCCCCcccEEEeCCHHHHHHHHHHHHHHhhc
Confidence 44677899999999988753 5667766543 34556667788888888876 33354
No 432
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=22.28 E-value=1.7e+02 Score=26.23 Aligned_cols=18 Identities=11% Similarity=0.246 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCCeEEEee
Q 028497 145 EKLVRTFHGRNKRVFAWT 162 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt 162 (208)
+.+++++|++|+++.+|.
T Consensus 399 k~lv~~ih~~Glk~GlW~ 416 (732)
T 2xn2_A 399 GHFADYVHEQGLKFGLWF 416 (732)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEe
Confidence 567999999999999995
No 433
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=22.24 E-value=1.8e+02 Score=25.13 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=15.3
Q ss_pred HHHHHHHHhCCCeEEEee
Q 028497 145 EKLVRTFHGRNKRVFAWT 162 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt 162 (208)
+.+++++|++|+++.+|.
T Consensus 253 k~lvd~lh~~Glk~Giw~ 270 (564)
T 1zy9_A 253 EEMAKVIAENGFIPGIWT 270 (564)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 567889999999998885
No 434
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=22.23 E-value=2.9e+02 Score=21.75 Aligned_cols=80 Identities=13% Similarity=0.060 Sum_probs=46.5
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHH---hCCCeEEEeeCCCHHHHHHHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFH---GRNKRVFAWTVDDEDSMRKML 173 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~g~~v~~wtv~~~~~~~~~~ 173 (208)
++++++++..|..++.+..... ... .+..+ .|++++-... .+++.++.+. ....++.+=+--+++.+..+.
T Consensus 198 ~Av~~~r~~~p~~~ieVEvdtl--de~-~eAl~-aGaD~I~LDn--~~~~~l~~av~~i~~~v~ieaSGGI~~~~i~~~a 271 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQIEVETL--DQL-RTALA-HGARSVLLDN--FTLDMMRDAVRVTEGRAVLEVSGGVNFDTVRAIA 271 (298)
T ss_dssp HHHHHHHHHC--CCCEEEESSH--HHH-HHHHH-TTCEEEEEES--CCHHHHHHHHHHHTTSEEEEEESSCSTTTHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEeCCH--HHH-HHHHH-cCCCEEEECC--CCHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHH
Confidence 5678888888877765554321 101 12222 6777665433 4455444332 234556666555788899999
Q ss_pred hCCCCEEEc
Q 028497 174 HERVDAVVT 182 (208)
Q Consensus 174 ~~gvd~i~T 182 (208)
+.|||+|-+
T Consensus 272 ~tGVD~isv 280 (298)
T 3gnn_A 272 ETGVDRISI 280 (298)
T ss_dssp HTTCSEEEC
T ss_pred HcCCCEEEE
Confidence 999999954
No 435
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=22.17 E-value=2.9e+02 Score=21.67 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=63.8
Q ss_pred eEEEEeecCCCCCchhHHHHHHHHHHhcCCcceEEEee--------CHHHHHHHHhhccCCeEEEEEEecCC--Cchhh-
Q 028497 57 KVILDAKVGPPSYEKGLAKDILSVIERTKCYNCLVWAK--------SDNLVRDIMRLSSNVTAGYIIMVDPS--TGFRT- 125 (208)
Q Consensus 57 ~l~lEiK~~~~~~~~~~~~~v~~~l~~~~~~~~ii~Sf--------~~~~l~~l~~~~p~~~~~~l~~~~~~--~~~~~- 125 (208)
.+.+|+=..+ + +.+... .+.|..+.-+.+. +...++.+++. .++++-.+...... .|...
T Consensus 39 ~~~lEvc~~s------~-~~a~~A-~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~-~~ipV~vMIRPRgGdF~Ys~~E 109 (287)
T 3iwp_A 39 GFLMEVCVDS------V-ESAVNA-ERGGADRIELCSGLSEGGTTPSMGVLQVVKQS-VQIPVFVMIRPRGGDFLYSDRE 109 (287)
T ss_dssp CSEEEEEESS------H-HHHHHH-HHHTCSEEEECBCGGGTCBCCCHHHHHHHHTT-CCSCEEEECCSSSSCSCCCHHH
T ss_pred CceEEEEeCC------H-HHHHHH-HHhCCCEEEECCCCCCCCCCCCHHHHHHHHHh-cCCCeEEEEecCCCCcccCHHH
Confidence 4567876643 2 222222 3446544445443 56788888874 45888666542211 12211
Q ss_pred --------hHhhhhcCceEeec----ccccCHHHHHHHH--hCCCeEEEee-----CCCHHHHHHHHhCCCCEEEcC
Q 028497 126 --------NLLRIRKAGVVGVY----HPLIDEKLVRTFH--GRNKRVFAWT-----VDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 126 --------~~~~~~~~~~~~~~----~~~~~~~~v~~~~--~~g~~v~~wt-----v~~~~~~~~~~~~gvd~i~TD 183 (208)
..++..|++.+.+. ...++.+..+.+- ..++.+-.-- .+..+.++.++++|++-|.|-
T Consensus 110 ~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTS 186 (287)
T 3iwp_A 110 IEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTS 186 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECC
Confidence 22345888887654 2346655444432 2344432221 123467888899999999986
No 436
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=22.13 E-value=2.4e+02 Score=20.98 Aligned_cols=15 Identities=0% Similarity=0.018 Sum_probs=7.8
Q ss_pred hHHHHHHHHHHhcCC
Q 028497 72 GLAKDILSVIERTKC 86 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~ 86 (208)
.+.+.+.+.+++.|+
T Consensus 25 ~~~~gi~~~a~~~g~ 39 (287)
T 3bbl_A 25 QFLSSMVREAGAVNY 39 (287)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 444555555555553
No 437
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=22.11 E-value=2.1e+02 Score=20.20 Aligned_cols=50 Identities=22% Similarity=0.305 Sum_probs=35.5
Q ss_pred HHHHHHHh--CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHG--RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~--~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++ .+.++.+.|.. +.+....+++.|++++++- .++.+.+.++..
T Consensus 60 ~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~ 114 (220)
T 1p2f_A 60 EICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRF 114 (220)
T ss_dssp HHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHH
Confidence 55666654 47888888764 4667888899999999876 556666666543
No 438
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=22.10 E-value=3e+02 Score=21.87 Aligned_cols=99 Identities=8% Similarity=0.104 Sum_probs=60.4
Q ss_pred HHHHHHHhhc-cCCeEEEEEEecC----CCch--hhhHh---hhhcCceEeecc------------cccCHHHHHHHHh-
Q 028497 97 NLVRDIMRLS-SNVTAGYIIMVDP----STGF--RTNLL---RIRKAGVVGVYH------------PLIDEKLVRTFHG- 153 (208)
Q Consensus 97 ~~l~~l~~~~-p~~~~~~l~~~~~----~~~~--~~~~~---~~~~~~~~~~~~------------~~~~~~~v~~~~~- 153 (208)
++++.+|+.. ++.++++=++... .... ...++ ...|++++.+.. .....++++.+++
T Consensus 207 eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~ 286 (349)
T 3hgj_A 207 QVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR 286 (349)
T ss_dssp HHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH
Confidence 4677777765 4677887554211 0000 11222 236788877542 1123455666655
Q ss_pred CCCeEEEee-CCCHHHHHHHHhCC-CCEEEcC-----ChHHHHHHHHHH
Q 028497 154 RNKRVFAWT-VDDEDSMRKMLHER-VDAVVTS-----NPILFQRVMQDI 195 (208)
Q Consensus 154 ~g~~v~~wt-v~~~~~~~~~~~~g-vd~i~TD-----~P~~~~~~~~~~ 195 (208)
.+++|.+-+ +.+.++++++++.| +|+|.-- +|+...++.+++
T Consensus 287 ~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l 335 (349)
T 3hgj_A 287 VGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKAL 335 (349)
T ss_dssp HCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHT
T ss_pred cCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHC
Confidence 478876654 67899999999999 9998866 456666666543
No 439
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=22.03 E-value=61 Score=26.00 Aligned_cols=15 Identities=13% Similarity=0.051 Sum_probs=9.8
Q ss_pred CHHHHHHHHhCCCeE
Q 028497 144 DEKLVRTFHGRNKRV 158 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v 158 (208)
..+.++.+.+.|+..
T Consensus 95 ~~~~i~~a~~aGvd~ 109 (345)
T 1nvm_A 95 SVHDLKNAYQAGARV 109 (345)
T ss_dssp CHHHHHHHHHHTCCE
T ss_pred cHHHHHHHHhCCcCE
Confidence 456677777777654
No 440
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=21.99 E-value=2.2e+02 Score=20.19 Aligned_cols=49 Identities=12% Similarity=0.103 Sum_probs=33.7
Q ss_pred HHHHHHHhC--CCeEEEeeCCC-HHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVDD-EDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~-~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++. +.++.+.|..+ .+....+++.|++++++- .+..+.+.++.
T Consensus 63 ~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~ 116 (225)
T 1kgs_A 63 EILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRA 116 (225)
T ss_dssp HHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEeCCCCHHHHHHHHHH
Confidence 455555543 67888888755 456778889999999875 55666655554
No 441
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=21.97 E-value=2.6e+02 Score=21.04 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=38.3
Q ss_pred HHHHHHHhCCCeEE----EeeCCCH----HHHHHH-----HhC--CCCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 146 KLVRTFHGRNKRVF----AWTVDDE----DSMRKM-----LHE--RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 146 ~~v~~~~~~g~~v~----~wtv~~~----~~~~~~-----~~~--gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
.+.+.++++|+.+. ..+-.+. ..++.+ ++. .+++|++-+-..+..+++..+ +.|..+|+
T Consensus 152 Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~ai~~~nd~~A~g~~~al~----~~G~~vP~ 225 (303)
T 3kke_A 152 GYLETLASAGLRSEAAWVVDAGWEADAGSAALNTLYRGANLGKPDGPTAVVVASVNAAVGALSTAL----RLGLRVPE 225 (303)
T ss_dssp HHHHHHHHTTCCCCGGGEEECCSSHHHHHHHHHHHHHHHCTTSTTSCSEEEESSHHHHHHHHHHHH----HTTCCTTT
T ss_pred HHHHHHHHcCCCCCcceEEecCCChHHHHHHHHHhcchhhhcCCCCCcEEEECCHHHHHHHHHHHH----HcCCCCCC
Confidence 45677888998752 2232232 346666 654 499999988877777776555 66766663
No 442
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=21.87 E-value=94 Score=23.19 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=23.4
Q ss_pred HHHHHHhCCCeEEEeeCC--------CHHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNKRVFAWTVD--------DEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~--------~~~~~~~~~~~gvd~i~TD 183 (208)
..+.+.++|++++....+ +++-.+.+.+.++|.|++=
T Consensus 52 ~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dlivla 96 (215)
T 3da8_A 52 AAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSA 96 (215)
T ss_dssp HHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhhCCCEEEEc
Confidence 356778888887777542 1223455567788887763
No 443
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=21.86 E-value=91 Score=21.96 Aligned_cols=49 Identities=6% Similarity=0.002 Sum_probs=31.9
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHH---hCCCCEEEc--CChHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKML---HERVDAVVT--SNPILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~---~~gvd~i~T--D~P~~~~~~~~~~ 195 (208)
...++.++++|+++.+=|-+ ...+..+ .+|++.+.. +.|..+..+++++
T Consensus 42 ~~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~~~~g~~~K~~~l~~~~~~~ 95 (168)
T 3ewi_A 42 AIGISLLKKSGIEVRLISER--ACSKQTLSALKLDCKTEVSVSDKLATVDEWRKEM 95 (168)
T ss_dssp HHHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCCEECSCSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcEEEECCCChHHHHHHHHHHc
Confidence 34689999999999999876 3333333 578883332 4555566655543
No 444
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=21.81 E-value=2.7e+02 Score=21.19 Aligned_cols=31 Identities=6% Similarity=-0.163 Sum_probs=25.2
Q ss_pred ceEeecccccCHHHHHHHHhCCCeEEEeeCC
Q 028497 134 GVVGVYHPLIDEKLVRTFHGRNKRVFAWTVD 164 (208)
Q Consensus 134 ~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~ 164 (208)
..+.+.+...++..++.++++|+++..++..
T Consensus 205 ~~fr~PyG~~n~~~~~~~~~~Gy~~a~t~~~ 235 (268)
T 3vus_A 205 HVFVWPYGEANGIAIEELKKLGYDMFFTLES 235 (268)
T ss_dssp CEEECGGGCCCHHHHHHHHHTTCCEEECCCS
T ss_pred CEEEeCCCcCCHHHHHHHHHCCCcEEEEecC
Confidence 4566677788899999999999998888754
No 445
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=21.78 E-value=2.1e+02 Score=24.16 Aligned_cols=58 Identities=9% Similarity=0.147 Sum_probs=36.3
Q ss_pred HHHHHHHhCCCeEEEeeC-CCHHHHHHHH-hCCCCEEEcCC---hHHHHHHHHHHHhhhhhcCc
Q 028497 146 KLVRTFHGRNKRVFAWTV-DDEDSMRKML-HERVDAVVTSN---PILFQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv-~~~~~~~~~~-~~gvd~i~TD~---P~~~~~~~~~~~~~~~~~~~ 204 (208)
++-+.++++|.++.+-.. +..+.+.+++ +.|++.|++|. |.... .-...+..|.+.|.
T Consensus 69 ~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~~~~V~~~~~~~p~~~~-rd~~v~~~l~~~gi 131 (509)
T 1u3d_A 69 QLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLV-RDHRAKDVLTAQGI 131 (509)
T ss_dssp HHHHHHHHTTCCEEEEECSCHHHHHHHHHHHHTCCEEEEECCCSHHHHH-HHHHHHHHHHTTTC
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHcCCCEEEEecccCHHHHH-HHHHHHHHHHHcCc
Confidence 445567889999988764 4456677766 46999999873 33222 12234566655554
No 446
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=21.73 E-value=2.7e+02 Score=21.51 Aligned_cols=32 Identities=9% Similarity=0.044 Sum_probs=22.6
Q ss_pred cCceEeecccccC----HHHHHHHHhCCCeEEEeeC
Q 028497 132 KAGVVGVYHPLID----EKLVRTFHGRNKRVFAWTV 163 (208)
Q Consensus 132 ~~~~~~~~~~~~~----~~~v~~~~~~g~~v~~wtv 163 (208)
.++.+.+.++.+. .++++.++++|+.+.+|..
T Consensus 170 ~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~sp 205 (312)
T 1pyf_A 170 LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFP 205 (312)
T ss_dssp CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEEST
T ss_pred CceEEeccCCccccchHHHHHHHHHHcCCeEEEecc
Confidence 3455555555443 2489999999999999964
No 447
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=21.71 E-value=1.4e+02 Score=22.59 Aligned_cols=36 Identities=11% Similarity=0.193 Sum_probs=24.8
Q ss_pred HHHHHHhCCC-eEEEe-eCCCHHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNK-RVFAW-TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~-~v~~w-tv~~~~~~~~~~~~gvd~i~TD 183 (208)
+.+.++. |. .+..| .++++..++.+...|.|.|+-|
T Consensus 10 ~k~~l~~-g~~~~~~~l~v~~p~~~e~a~~~gaD~v~lD 47 (256)
T 1dxe_A 10 FKAALAA-KQVQIGCWSALSNPISTEVLGLAGFDWLVLD 47 (256)
T ss_dssp HHHHHHT-TCCEEEEEECSCSHHHHHHHTTSCCSEEEEE
T ss_pred HHHHHHC-CCCeEEEEEeCCCHHHHHHHHhCCCCEEEEc
Confidence 3344444 44 35566 3578888888888899988887
No 448
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=21.66 E-value=1.8e+02 Score=19.06 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=34.3
Q ss_pred HHHHHHHhC--CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++. +.++.+.|-. +.+....+++.|+++++.- .++.+.+.++.
T Consensus 83 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~ 136 (150)
T 4e7p_A 83 EVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHT 136 (150)
T ss_dssp HHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHH
Confidence 566666654 5677777754 5677888999999998885 45555555544
No 449
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=21.61 E-value=2.7e+02 Score=21.58 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=16.6
Q ss_pred HHHHhCCCeEEEeeCC-CHH----HHHHHHhCCCCEEEc
Q 028497 149 RTFHGRNKRVFAWTVD-DED----SMRKMLHERVDAVVT 182 (208)
Q Consensus 149 ~~~~~~g~~v~~wtv~-~~~----~~~~~~~~gvd~i~T 182 (208)
+.+.++|+.+.+...+ +.+ .++.+...++||||.
T Consensus 90 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~ 128 (348)
T 3bil_A 90 STASKAGLATIITNSNEDATTMSGSLEFLTSHGVDGIIC 128 (348)
T ss_dssp HHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSCEEE
T ss_pred HHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 4455566665544332 221 234445566666654
No 450
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=21.55 E-value=55 Score=24.28 Aligned_cols=21 Identities=24% Similarity=0.272 Sum_probs=18.8
Q ss_pred CCCHHHHHHHHhCCCCEEEcC
Q 028497 163 VDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 163 v~~~~~~~~~~~~gvd~i~TD 183 (208)
=|+-..++++++.|+|+|-+|
T Consensus 22 ENTl~Af~~A~~~G~d~iE~D 42 (224)
T 1vd6_A 22 ENTLESFRLALEAGLDGVELD 42 (224)
T ss_dssp TTSHHHHHHHHHTTCSEEEEE
T ss_pred cchHHHHHHHHHcCCCEEEEE
Confidence 478899999999999999887
No 451
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=21.44 E-value=2.5e+02 Score=20.75 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=38.3
Q ss_pred HHHHHHHhCCCeE----EEeeCCCH----HHHHHHHhC--CCCEEEcCChHHHHHHHHHHHhhhhhcCccccC
Q 028497 146 KLVRTFHGRNKRV----FAWTVDDE----DSMRKMLHE--RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLIR 208 (208)
Q Consensus 146 ~~v~~~~~~g~~v----~~wtv~~~----~~~~~~~~~--gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~~ 208 (208)
.+.+.++++|+.+ ...+-.+. +.++.+++. .+++|++.+-..+..+++..+ +.|..+|+
T Consensus 148 gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~----~~g~~vP~ 216 (289)
T 3g85_A 148 GFIETCHKNGIKISENHIIAAENSIHGGVDAAKKLMKLKNTPKALFCNSDSIALGVISVLN----KRQISIPD 216 (289)
T ss_dssp HHHHHHHHTTCBCCGGGEEECCSSHHHHHHHHHHHTTSSSCCSEEEESSHHHHHHHHHHHH----HTTCCTTT
T ss_pred HHHHHHHHcCCCCChhheeccCCCHHHHHHHHHHHHcCCCCCcEEEEcCCHHHHHHHHHHH----HcCCCCCC
Confidence 4567788899875 22332332 345666664 489999988877777776555 66666653
No 452
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=21.44 E-value=1.9e+02 Score=24.83 Aligned_cols=59 Identities=10% Similarity=0.166 Sum_probs=37.4
Q ss_pred HHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEcCC---hHHHHHHHHHHHhhhhhcCcc
Q 028497 146 KLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVTSN---PILFQRVMQDIRTQCLEEGFS 205 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~TD~---P~~~~~~~~~~~~~~~~~~~~ 205 (208)
++-+.++++|.++++...+..+.+..++ +.||+.|.+|. |....+ -+..+..|.+.|..
T Consensus 72 ~L~~~L~~~G~~L~v~~G~~~~vl~~L~~~~~~~~V~~n~~~~p~~~~R-D~~v~~~l~~~gI~ 134 (537)
T 3fy4_A 72 DLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQAL-DVKVKDYASSTGVE 134 (537)
T ss_dssp HHHHHHHHTTCCCEEEESCHHHHHHHHHTTSCEEEEEECCCCSHHHHHH-HHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCceEEEECCHHHHHHHHHHHcCCCEEEEeccccHHHHHH-HHHHHHHHHHcCCe
Confidence 4455677888888888776666677776 46899998883 332221 12345566566543
No 453
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=21.29 E-value=58 Score=25.85 Aligned_cols=22 Identities=9% Similarity=0.215 Sum_probs=20.4
Q ss_pred eCCCHHHHHHHHhCCCCEEEcC
Q 028497 162 TVDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 162 tv~~~~~~~~~~~~gvd~i~TD 183 (208)
.+|+-+.++.+++.|+++|-+|
T Consensus 35 ~vNTl~~~~~a~~~GAn~IE~D 56 (302)
T 3rlg_A 35 MVNAIGQIDEFVNLGANSIETD 56 (302)
T ss_dssp CCCSHHHHHHHHHTTCSEEEEE
T ss_pred hhhhHHHHHHHHHcCCCEEEEE
Confidence 4899999999999999999887
No 454
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=21.26 E-value=55 Score=24.51 Aligned_cols=20 Identities=10% Similarity=0.190 Sum_probs=18.1
Q ss_pred CCHHHHHHHHhCCCCEEEcC
Q 028497 164 DDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 164 ~~~~~~~~~~~~gvd~i~TD 183 (208)
|+-..++++++.|+|+|-+|
T Consensus 28 NTl~Af~~A~~~Gad~iE~D 47 (234)
T 1o1z_A 28 NTLEAFMKAIEAGANGVELD 47 (234)
T ss_dssp TSHHHHHHHHHTTCSEEEEE
T ss_pred chHHHHHHHHHcCCCEEEEE
Confidence 77889999999999999887
No 455
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=21.23 E-value=1.7e+02 Score=18.79 Aligned_cols=49 Identities=8% Similarity=0.139 Sum_probs=32.6
Q ss_pred HHHHHHHh----CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHG----RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~----~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++ ..+++.+.|.. +......+++.|++++++= .++.+...++.
T Consensus 65 ~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~ 120 (136)
T 3t6k_A 65 TLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYRVKN 120 (136)
T ss_dssp HHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHHHHHHH
Confidence 34455544 36778877764 4666778899999998875 55555555554
No 456
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=21.23 E-value=1.6e+02 Score=21.48 Aligned_cols=11 Identities=18% Similarity=0.202 Sum_probs=5.0
Q ss_pred HHHHHHhCCCe
Q 028497 147 LVRTFHGRNKR 157 (208)
Q Consensus 147 ~v~~~~~~g~~ 157 (208)
.++.+...++.
T Consensus 50 ~~~~l~~~~vd 60 (255)
T 1byk_A 50 HLGVLKRRNID 60 (255)
T ss_dssp HHHHHHTTTCC
T ss_pred HHHHHHhcCCC
Confidence 34444444444
No 457
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=21.15 E-value=1.7e+02 Score=18.78 Aligned_cols=49 Identities=6% Similarity=-0.013 Sum_probs=29.8
Q ss_pred HHHHHHHhC--CCeEEEeeCCCHHHHHHHHhCCCCEEEcC--ChHHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVDDEDSMRKMLHERVDAVVTS--NPILFQRVMQDI 195 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~~ 195 (208)
++++.+++. ..++.+.+.. .+....+++.|++++++= .+..+.+.++..
T Consensus 72 ~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 124 (143)
T 2qv0_A 72 LLAQNISQFAHKPFIVFITAW-KEHAVEAFELEAFDYILKPYQESRIINMLQKL 124 (143)
T ss_dssp HHHHHHTTSTTCCEEEEEESC-CTTHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHccCCCceEEEEeCC-HHHHHHHHhCCcceEEeCCCCHHHHHHHHHHH
Confidence 445555543 3345555554 345677889999998875 455666555543
No 458
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=21.14 E-value=1.5e+02 Score=24.11 Aligned_cols=38 Identities=11% Similarity=-0.001 Sum_probs=30.9
Q ss_pred CHHHHHHHHhCCCeEEEe-eCCCHHHHHHHHhCCCCEEE
Q 028497 144 DEKLVRTFHGRNKRVFAW-TVDDEDSMRKMLHERVDAVV 181 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~w-tv~~~~~~~~~~~~gvd~i~ 181 (208)
..+++++++++|+.|.+= |.-+.+++..+++.|++.++
T Consensus 177 ~~~~i~~l~~~gi~vs~GHs~A~~e~~~~a~~~Ga~~~T 215 (381)
T 3iv8_A 177 KPEHIEKLVKAGIVVSIGHTNATYSEARKSFESGITFAT 215 (381)
T ss_dssp CHHHHHHHHHTTCEEEECSBCCCHHHHHHHHHTTCCEES
T ss_pred cHHHHHHHHHCCCEEEecCCCCCHHHHHHHHHcCCCEee
Confidence 378999999999998874 56678888888888888743
No 459
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=21.13 E-value=2.6e+02 Score=20.81 Aligned_cols=17 Identities=12% Similarity=0.120 Sum_probs=8.3
Q ss_pred HHHHHHHHhCCCeEEEe
Q 028497 145 EKLVRTFHGRNKRVFAW 161 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~w 161 (208)
...++.+.+.|+++.+.
T Consensus 85 ~~~~~~l~~~~iPvV~~ 101 (289)
T 2fep_A 85 DEHVAEFKRSPVPIVLA 101 (289)
T ss_dssp HHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHhcCCCEEEE
Confidence 34444555555555443
No 460
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=21.10 E-value=3.1e+02 Score=21.65 Aligned_cols=43 Identities=9% Similarity=0.044 Sum_probs=31.8
Q ss_pred HHHHHHHhC--CCeEEE-eeCCCHHHHHHHHhCCCCEEEcCChHHH
Q 028497 146 KLVRTFHGR--NKRVFA-WTVDDEDSMRKMLHERVDAVVTSNPILF 188 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~-wtv~~~~~~~~~~~~gvd~i~TD~P~~~ 188 (208)
..+..+++. +++|.+ -++.+.+++.+++.+|+|+|..-.|-..
T Consensus 240 ~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~ 285 (349)
T 1p0k_A 240 ASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLK 285 (349)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHH
Confidence 345555442 688765 4689999999999999999998765433
No 461
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=21.10 E-value=1.1e+02 Score=24.07 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=26.5
Q ss_pred eEEEeeCCCHHHHHHHHhCCCCEEEcCC--hHHHHHHHH
Q 028497 157 RVFAWTVDDEDSMRKMLHERVDAVVTSN--PILFQRVMQ 193 (208)
Q Consensus 157 ~v~~wtv~~~~~~~~~~~~gvd~i~TD~--P~~~~~~~~ 193 (208)
++.+ .+++.++++.+++.|+|+|.+|. |+.+++..+
T Consensus 210 kI~v-ev~tlee~~eA~~aGaD~I~ld~~~~e~l~~~v~ 247 (296)
T 1qap_A 210 PVEV-EVENLDELDDALKAGADIIMLDNFNTDQMREAVK 247 (296)
T ss_dssp CEEE-EESSHHHHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred cEEE-EeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHH
Confidence 4444 56778889999999999999994 455555443
No 462
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=21.08 E-value=1.7e+02 Score=21.60 Aligned_cols=38 Identities=13% Similarity=0.313 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCeEEEeeCC---C-----HHHHHHHHhCCCCEEEcC
Q 028497 146 KLVRTFHGRNKRVFAWTVD---D-----EDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~---~-----~~~~~~~~~~gvd~i~TD 183 (208)
...+.++++|++++.+... + ++..+.+.+.++|.|+.=
T Consensus 44 ~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dliv~a 89 (212)
T 3av3_A 44 KVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQIDWIALA 89 (212)
T ss_dssp HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCCCEEEEc
Confidence 3457788888888876542 2 234455667888888765
No 463
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=21.07 E-value=1.8e+02 Score=23.39 Aligned_cols=49 Identities=18% Similarity=0.189 Sum_probs=36.4
Q ss_pred HHHHHHHh-CCCeEE---EeeCCCHHHHHHHHhCCCCEEEc-------CChHHHHHHHHH
Q 028497 146 KLVRTFHG-RNKRVF---AWTVDDEDSMRKMLHERVDAVVT-------SNPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~-~g~~v~---~wtv~~~~~~~~~~~~gvd~i~T-------D~P~~~~~~~~~ 194 (208)
++++.+++ -.++|. .=++++++++..+++.|+|+|.- ++|....+.+.+
T Consensus 230 ell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ 289 (330)
T 2yzr_A 230 EVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVE 289 (330)
T ss_dssp HHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHH
Confidence 67777776 456764 23678999999999999999873 577776665553
No 464
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=21.07 E-value=1.7e+02 Score=19.11 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=27.0
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHH----HHHHh---CCCCEEEcCChHHHHHHHHHHH
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSM----RKMLH---ERVDAVVTSNPILFQRVMQDIR 196 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~----~~~~~---~gvd~i~TD~P~~~~~~~~~~~ 196 (208)
+++.+-=++-.|+.+ |.+.+++++ +++.+ .|+=.|..+.-+.+...+++++
T Consensus 11 D~dtv~GFrLaGi~~--~~v~~~ee~~~~~~~l~~~~digIIlIte~~a~~i~~~i~~~~ 68 (109)
T 2d00_A 11 DPETAQGFRLAGLEG--YGASSAEEAQSLLETLVERGGYALVAVDEALLPDPERAVERLM 68 (109)
T ss_dssp CHHHHHHHHHTTSEE--EECSSHHHHHHHHHHHHHHCCCSEEEEETTTCSCHHHHHHHHT
T ss_pred CHHHHHHHHHcCCeE--EEeCCHHHHHHHHHHHhhCCCeEEEEEeHHHHHhhHHHHHHHH
Confidence 355566667778854 355565544 33332 2444444445555555555553
No 465
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=21.06 E-value=1.3e+02 Score=21.24 Aligned_cols=38 Identities=29% Similarity=0.505 Sum_probs=23.4
Q ss_pred HHHHHHHHhCCCeEEEee--CCCHHHHHHHH----h-CCCCEEEc
Q 028497 145 EKLVRTFHGRNKRVFAWT--VDDEDSMRKML----H-ERVDAVVT 182 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt--v~~~~~~~~~~----~-~gvd~i~T 182 (208)
+.+.+.+++.|..+...+ .|+.+.++..+ + .++|.|+|
T Consensus 34 ~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVit 78 (169)
T 1y5e_A 34 QLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLT 78 (169)
T ss_dssp HHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEE
T ss_pred HHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 445666778888776543 35655554443 2 26888877
No 466
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=21.02 E-value=2.4e+02 Score=21.76 Aligned_cols=38 Identities=8% Similarity=0.124 Sum_probs=22.5
Q ss_pred HHHHHHHhCCCeEEEeeCC-CH----HHHHHHHh--CCCCEEEcC
Q 028497 146 KLVRTFHGRNKRVFAWTVD-DE----DSMRKMLH--ERVDAVVTS 183 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~wtv~-~~----~~~~~~~~--~gvd~i~TD 183 (208)
.+-+.++++|+.+.+...+ +. ..++.++. .++|||+.-
T Consensus 25 g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~ 69 (350)
T 3h75_A 25 FMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLV 69 (350)
T ss_dssp HHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEE
T ss_pred HHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 3445666777777665443 32 23555666 478887764
No 467
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=21.01 E-value=1.7e+02 Score=18.64 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=32.4
Q ss_pred HHHHHHh-CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 147 LVRTFHG-RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 147 ~v~~~~~-~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
+++.++. .+.++.+.+.. +......+++.|++++++- .+..+.+.++.
T Consensus 73 ~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~ 124 (140)
T 3cg0_A 73 TAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIEM 124 (140)
T ss_dssp HHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHHH
Confidence 3444433 57788877764 5667788899999998875 45555555554
No 468
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=20.99 E-value=2.6e+02 Score=20.75 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=37.1
Q ss_pred HHHHHHHhCCCeEE---EeeC-CCH----HHHHHHHh-C---CCCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 146 KLVRTFHGRNKRVF---AWTV-DDE----DSMRKMLH-E---RVDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 146 ~~v~~~~~~g~~v~---~wtv-~~~----~~~~~~~~-~---gvd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
.+.+.++++|+.+. ++.. .+. ..++.+++ . .+++|++-+-..+..+++..+ +.|..+|
T Consensus 146 Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~~~d~~a~g~~~al~----~~G~~vP 215 (287)
T 3bbl_A 146 GYLEAMQTAQLPIETGYILRGEGTFEVGRAMTLHLLDLSPERRPTAIMTLNDTMAIGAMAAAR----ERGLTIG 215 (287)
T ss_dssp HHHHHHHHTTCCCCGGGEEECCSSHHHHHHHHHHHHTSCTTTSCSEEEESSHHHHHHHHHHHH----HTTCCBT
T ss_pred HHHHHHHHcCCCCChhhEEeCCCCHHHHHHHHHHHHhhCCCCCCcEEEECCcHHHHHHHHHHH----HcCCCCC
Confidence 35667888898642 2222 232 34667776 4 689999987777777776555 5566555
No 469
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=20.97 E-value=53 Score=25.44 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=26.0
Q ss_pred HHHHHHHHhCCCeEEEeeCCC-----HHHHHHHHhCCCCE
Q 028497 145 EKLVRTFHGRNKRVFAWTVDD-----EDSMRKMLHERVDA 179 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~-----~~~~~~~~~~gvd~ 179 (208)
.++++.++++|+++++-|-++ ......+..+|+..
T Consensus 107 ~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~ 146 (262)
T 3ocu_A 107 VEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG 146 (262)
T ss_dssp HHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCc
Confidence 467888999999999888653 34566677788763
No 470
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=20.96 E-value=1.6e+02 Score=18.42 Aligned_cols=49 Identities=10% Similarity=0.105 Sum_probs=33.4
Q ss_pred HHHHHHHh--CCCeEEEeeCC-CHHHHHHHHhCCCCEEEcC--ChHHHHHHHHH
Q 028497 146 KLVRTFHG--RNKRVFAWTVD-DEDSMRKMLHERVDAVVTS--NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~--~g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD--~P~~~~~~~~~ 194 (208)
++++.+++ .+.++.+.|.. +......+++.|++++++- .++.+.+.++.
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~ 117 (126)
T 1dbw_A 64 ELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIER 117 (126)
T ss_dssp HHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHH
Confidence 44555554 35778777764 5667888899999999876 45566555554
No 471
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.90 E-value=1.3e+02 Score=21.07 Aligned_cols=38 Identities=21% Similarity=0.335 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCCeEEEee--CCCHHHHHHHH----hC-CCCEEEc
Q 028497 145 EKLVRTFHGRNKRVFAWT--VDDEDSMRKML----HE-RVDAVVT 182 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt--v~~~~~~~~~~----~~-gvd~i~T 182 (208)
+.+.+.+++.|..+...+ .|+.+.++..+ +. ++|.|+|
T Consensus 24 ~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVit 68 (164)
T 2is8_A 24 LAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILT 68 (164)
T ss_dssp HHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred HHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 456677888898876553 36665554444 32 6888887
No 472
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=20.89 E-value=1.1e+02 Score=22.80 Aligned_cols=14 Identities=0% Similarity=-0.166 Sum_probs=6.4
Q ss_pred HHHHHHhCCCeEEE
Q 028497 147 LVRTFHGRNKRVFA 160 (208)
Q Consensus 147 ~v~~~~~~g~~v~~ 160 (208)
.++.+...++.-.+
T Consensus 52 ~~~~l~~~~vdgiI 65 (280)
T 3gyb_A 52 PITSALSMRPDGII 65 (280)
T ss_dssp HHHHHHTTCCSEEE
T ss_pred HHHHHHhCCCCEEE
Confidence 44444445544333
No 473
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=20.85 E-value=1.7e+02 Score=18.47 Aligned_cols=49 Identities=16% Similarity=0.243 Sum_probs=31.9
Q ss_pred HHHHHHHhC--CCeEEEeeCC-CHHHHHHHHhCCCCEEEcC---ChHHHHHHHHH
Q 028497 146 KLVRTFHGR--NKRVFAWTVD-DEDSMRKMLHERVDAVVTS---NPILFQRVMQD 194 (208)
Q Consensus 146 ~~v~~~~~~--g~~v~~wtv~-~~~~~~~~~~~gvd~i~TD---~P~~~~~~~~~ 194 (208)
++++.+++. ..++.+.|.. +......+++.|++++++- .++.+.+.++.
T Consensus 68 ~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i~~ 122 (130)
T 3eod_A 68 KLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFA 122 (130)
T ss_dssp HHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHH
Confidence 445555544 4677777764 4666788899999998865 34556655554
No 474
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=20.77 E-value=2e+02 Score=24.31 Aligned_cols=61 Identities=8% Similarity=0.032 Sum_probs=40.1
Q ss_pred hhhcCceEe-ecccccC-HHHHHHHHhCCCeEEEeeCCCHHHHHHHHhC--------CCCEEEcCChHHHH
Q 028497 129 RIRKAGVVG-VYHPLID-EKLVRTFHGRNKRVFAWTVDDEDSMRKMLHE--------RVDAVVTSNPILFQ 189 (208)
Q Consensus 129 ~~~~~~~~~-~~~~~~~-~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~~--------gvd~i~TD~P~~~~ 189 (208)
...|++..- ....+-| ......+...|++|+.|--.+.+++.+++.. +.+.|+=|--+...
T Consensus 66 ~a~GAev~~~~cN~~STqd~~aaal~~~gi~v~A~kget~eey~~~~~~~l~~~~~~~p~~ilDDGgDl~~ 136 (464)
T 3n58_A 66 KVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATM 136 (464)
T ss_dssp HHTTCEEEEECSSTTCCCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTCCTTSCCCSEEEESSSHHHH
T ss_pred HHcCCeEEEecCCCCCCcHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHcccCCCCCCEEEECchHHHH
Confidence 457877532 2223333 4566667889999999998888888777642 37777766554433
No 475
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=20.76 E-value=2.6e+02 Score=20.58 Aligned_cols=58 Identities=21% Similarity=0.194 Sum_probs=37.0
Q ss_pred HHHHHHHhCCCeEEE-e--eCCCH----HHHHHHHhCC--CCEEEcCChHHHHHHHHHHHhhhhhcCcccc
Q 028497 146 KLVRTFHGRNKRVFA-W--TVDDE----DSMRKMLHER--VDAVVTSNPILFQRVMQDIRTQCLEEGFSLI 207 (208)
Q Consensus 146 ~~v~~~~~~g~~v~~-w--tv~~~----~~~~~~~~~g--vd~i~TD~P~~~~~~~~~~~~~~~~~~~~~~ 207 (208)
.+.+.++++|+.+.. | +-.+. ..++.+++.+ +++|++-+-..+..+++..+ +.|..+|
T Consensus 137 gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~----~~g~~vP 203 (280)
T 3gyb_A 137 SFEATMRAHGLEPLSNDYLGPAVEHAGYTETLALLKEHPEVTAIFSSNDITAIGALGAAR----ELGLRVP 203 (280)
T ss_dssp HHHHHHHHTTCCCEECCCCSCCCHHHHHHHHHHHHHHCTTCCEEEESSHHHHHHHHHHHH----HHTCCTT
T ss_pred HHHHHHHHcCcCCCcccccCCCCHHHHHHHHHHHHhCCCCCCEEEECChHHHHHHHHHHH----HcCCCCC
Confidence 356678889987652 3 11222 3456666554 89999988777777776555 5565555
No 476
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=20.74 E-value=3.4e+02 Score=21.92 Aligned_cols=61 Identities=16% Similarity=0.359 Sum_probs=39.7
Q ss_pred CHHHHHHHHhCCCeEEEee--------CCC--HHHHHHHHhCCCC-EEEcCChHHHHHHH-HHHHhhhhhcCc
Q 028497 144 DEKLVRTFHGRNKRVFAWT--------VDD--EDSMRKMLHERVD-AVVTSNPILFQRVM-QDIRTQCLEEGF 204 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wt--------v~~--~~~~~~~~~~gvd-~i~TD~P~~~~~~~-~~~~~~~~~~~~ 204 (208)
++++++.++++|+.+-+=- +.+ ..-+.++++.||. .|-||+|......+ .++..-|...|+
T Consensus 242 d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~~ll~~Gv~v~l~TDdp~~~~~~l~~e~~~a~~~~gl 314 (367)
T 3iar_A 242 DQALYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTKRDMGF 314 (367)
T ss_dssp CHHHHHHHHHTTCEEEECHHHHHHTSSSCTTSCCHHHHHHHTTCCEEECCBSHHHHTCCHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHhCCcEEEECHHHHHHhCCCCCcccChHHHHHHCCCEEEECCCCccccCCCHHHHHHHHHHHcCC
Confidence 5689999999999986531 211 2368899999988 57799987654322 234444433444
No 477
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=20.74 E-value=1.7e+02 Score=19.31 Aligned_cols=40 Identities=10% Similarity=0.270 Sum_probs=29.9
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHHHHHH----hCCCCE-EEcC
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSMRKML----HERVDA-VVTS 183 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~----~~gvd~-i~TD 183 (208)
+++.++++...|.+..+-.+++++++..+. +.|+.. ++.|
T Consensus 37 ~~~~~~~W~~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~D 81 (115)
T 2zv3_A 37 NPRAVDEWLREGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRD 81 (115)
T ss_dssp CHHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CHHHHHHHHHCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 577888888999998888888888777665 567553 5533
No 478
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=20.72 E-value=3.3e+02 Score=21.86 Aligned_cols=26 Identities=15% Similarity=-0.040 Sum_probs=12.2
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHHHHH
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSMRKM 172 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~~~~ 172 (208)
+++-++.+.+.++ ..++++.++++.+
T Consensus 89 ~~~~~~~~~~~~i---~~~vds~~~l~~l 114 (388)
T 1bd0_A 89 RPADAALAAQQRI---ALTVFRSDWLEEA 114 (388)
T ss_dssp CGGGHHHHHHTTE---EEEECCHHHHHHH
T ss_pred CHHHHHHHHHcCC---EEEECCHHHHHHH
Confidence 3444444444443 2455555555444
No 479
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=20.61 E-value=54 Score=24.97 Aligned_cols=92 Identities=11% Similarity=0.135 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhcCCcceEEEe--e-------C-HHHHHHHHhhccCCeEEEEEEecCCCc--hh----hhH-------h
Q 028497 72 GLAKDILSVIERTKCYNCLVWA--K-------S-DNLVRDIMRLSSNVTAGYIIMVDPSTG--FR----TNL-------L 128 (208)
Q Consensus 72 ~~~~~v~~~l~~~~~~~~ii~S--f-------~-~~~l~~l~~~~p~~~~~~l~~~~~~~~--~~----~~~-------~ 128 (208)
.....++++++++++.-..|.. . . ++.++++.+ .+..+|-=...++... .. .++ .
T Consensus 54 ~~~~~il~iL~~~~vkATFFv~g~~~g~~~~~~~p~~lr~i~~--~GheIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 131 (254)
T 2iw0_A 54 TFTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRA--DGHLVGSHTYAHPDLNTLSSADRISQMRQLEEATR 131 (254)
T ss_dssp TTHHHHHHHHHHHTCCCEEEECSBSSSBTTSTTHHHHHHHHHH--TTCEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEEECCcccccccccCHHHHHHHHH--CCCEEEeeccCCCCcccCCHHHHHHHHHHHHHHHH
Confidence 4557789999999986554432 2 1 245666654 3455542211222110 11 111 1
Q ss_pred hhhcC--ceEeecccccCHHHHHHHHhCCCeEEEeeCCC
Q 028497 129 RIRKA--GVVGVYHPLIDEKLVRTFHGRNKRVFAWTVDD 165 (208)
Q Consensus 129 ~~~~~--~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~ 165 (208)
+..|. .++.+.+...++...+.+++.|+.+..|++++
T Consensus 132 ~~~G~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~w~~d~ 170 (254)
T 2iw0_A 132 RIDGFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDTNLDT 170 (254)
T ss_dssp HHHSCEESEECCGGGCCCHHHHHHHHHTTCEEECCSEEC
T ss_pred HHhCCCCCEEECCCCCCCHHHHHHHHHcCCeEEEeCCCC
Confidence 22443 34555566778899999999999999998753
No 480
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=20.61 E-value=2.5e+02 Score=20.81 Aligned_cols=37 Identities=5% Similarity=-0.005 Sum_probs=16.7
Q ss_pred HHHHHHhCCCC--EEEcCChHH--HHHHHHHHHhhhhhcCc
Q 028497 168 SMRKMLHERVD--AVVTSNPIL--FQRVMQDIRTQCLEEGF 204 (208)
Q Consensus 168 ~~~~~~~~gvd--~i~TD~P~~--~~~~~~~~~~~~~~~~~ 204 (208)
..+++++.|.. ++++..+.. ..+-++.++..+.+.|.
T Consensus 122 a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 162 (292)
T 3k4h_A 122 VAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADI 162 (292)
T ss_dssp HHHHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCC
Confidence 45566666643 234433321 12223344555555554
No 481
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=20.57 E-value=1.6e+02 Score=24.40 Aligned_cols=18 Identities=11% Similarity=0.049 Sum_probs=15.4
Q ss_pred HHHHHHHHhCCCeEEEee
Q 028497 145 EKLVRTFHGRNKRVFAWT 162 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wt 162 (208)
+.+++++|+.|+++.+|.
T Consensus 97 ~~l~~~ih~~Glk~Giw~ 114 (433)
T 3cc1_A 97 KPLSDAIHDLGLKFGIHI 114 (433)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCeeEEEe
Confidence 578899999999988885
No 482
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=20.55 E-value=1.8e+02 Score=22.64 Aligned_cols=36 Identities=8% Similarity=0.191 Sum_probs=25.4
Q ss_pred HHHHHHhCCC-eEEEee-CCCHHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNK-RVFAWT-VDDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~-~v~~wt-v~~~~~~~~~~~~gvd~i~TD 183 (208)
+.+.++ .|. .+.+|. .+++..++.+...|.|.|+-|
T Consensus 30 ~k~~l~-~G~~~~gl~~~~~~p~~~e~a~~~GaD~v~lD 67 (287)
T 2v5j_A 30 FKAALK-AGRPQIGLWLGLSSSYSAELLAGAGFDWLLID 67 (287)
T ss_dssp HHHHHH-TTCCEEEEEECSCCHHHHHHHHTSCCSEEEEE
T ss_pred HHHHHH-CCCcEEEEEEECCCHHHHHHHHhCCCCEEEEe
Confidence 334444 455 677774 567888888888888888887
No 483
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=20.45 E-value=2.4e+02 Score=23.51 Aligned_cols=61 Identities=15% Similarity=0.114 Sum_probs=40.1
Q ss_pred hhhcCceEe-ecccccC-HHHHHHHHhCCCeEEEeeCCCHHHHHHHHh---------CCCCEEEcCChHHHH
Q 028497 129 RIRKAGVVG-VYHPLID-EKLVRTFHGRNKRVFAWTVDDEDSMRKMLH---------ERVDAVVTSNPILFQ 189 (208)
Q Consensus 129 ~~~~~~~~~-~~~~~~~-~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~---------~gvd~i~TD~P~~~~ 189 (208)
...|++..- ...++-| ......+.+.|++|+.|--.+.+++.+++. .+.+.|+-|--+...
T Consensus 64 ~~~GA~v~~~~~n~~stqd~~aaal~~~gi~v~a~~ge~~~ey~~~~~~~l~~~~~~~~p~~ilDdGgdl~~ 135 (436)
T 3h9u_A 64 VELGAEVRWASCNIFSTQDHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTN 135 (436)
T ss_dssp HHTTCEEEEECSSTTTCCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHH
T ss_pred HHcCCEEEEecCCCCCCcHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHHhcccCCCCceEeccccHHHH
Confidence 457887532 2233334 455666788999999999888888876653 357777766554443
No 484
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=20.43 E-value=2.2e+02 Score=19.76 Aligned_cols=51 Identities=6% Similarity=0.175 Sum_probs=32.6
Q ss_pred HHHHHHHHhCCCeEEEeeCCCH---HHHHH-HHhCCC----CEEEcC------------ChHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDE---DSMRK-MLHERV----DAVVTS------------NPILFQRVMQDI 195 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~---~~~~~-~~~~gv----d~i~TD------------~P~~~~~~~~~~ 195 (208)
.++++.++++|+++.+-|-+.. ..+.. +-..|+ +.|++- .|..+..++++.
T Consensus 40 ~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 40 KETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp HHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 4678899999999999985543 44444 445665 455542 345566666554
No 485
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=20.40 E-value=1.2e+02 Score=23.18 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=24.3
Q ss_pred HHHHhCCCeEEEee-C-CCHHHHHHHHhCCCCEEEcC
Q 028497 149 RTFHGRNKRVFAWT-V-DDEDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 149 ~~~~~~g~~v~~wt-v-~~~~~~~~~~~~gvd~i~TD 183 (208)
+.+++....+.+|. . +++..++++...|.|.|+-|
T Consensus 8 ~~l~~g~~~~g~~~~~~~~p~~~e~a~~~g~D~vilD 44 (261)
T 3qz6_A 8 KKLSAGKSVVGTMLNLVYNPDIVRIYAEAGLDYFIVD 44 (261)
T ss_dssp HHHHTTCCEEEEEESSCCCTTHHHHHHHTTCSEEEEE
T ss_pred HHHHCCCCEEEEEEecCCCHHHHHHHhcCCcCEEEEe
Confidence 34444445556673 3 77888888888888888877
No 486
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=20.32 E-value=97 Score=23.32 Aligned_cols=8 Identities=13% Similarity=-0.243 Sum_probs=4.1
Q ss_pred CeEEEEEE
Q 028497 109 VTAGYIIM 116 (208)
Q Consensus 109 ~~~~~l~~ 116 (208)
..+|++..
T Consensus 6 ~~Igvi~~ 13 (304)
T 3o1i_D 6 EKICAIYP 13 (304)
T ss_dssp CEEEEEES
T ss_pred cEEEEEeC
Confidence 34555553
No 487
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=20.32 E-value=2.2e+02 Score=21.07 Aligned_cols=14 Identities=14% Similarity=0.344 Sum_probs=6.7
Q ss_pred HHHHHhCCCCEEEc
Q 028497 169 MRKMLHERVDAVVT 182 (208)
Q Consensus 169 ~~~~~~~gvd~i~T 182 (208)
++.+...++|||+.
T Consensus 51 ~~~l~~~~vdgiI~ 64 (290)
T 2fn9_A 51 FDAIIAAGYDAIIF 64 (290)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 33444455555553
No 488
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=20.32 E-value=1.8e+02 Score=22.60 Aligned_cols=36 Identities=8% Similarity=0.128 Sum_probs=18.0
Q ss_pred HHHHHHhCCCeEEEeeCCCHHHHHHHHhCCCCEEEc
Q 028497 147 LVRTFHGRNKRVFAWTVDDEDSMRKMLHERVDAVVT 182 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~~~~~~~~~~~~gvd~i~T 182 (208)
.++.++..|-++..-|+-|....+-+-+.|+|.|.+
T Consensus 8 ~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilv 43 (275)
T 1o66_A 8 TLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLV 43 (275)
T ss_dssp HHHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEE
Confidence 344444445455555555555555555555555544
No 489
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=20.30 E-value=2e+02 Score=19.07 Aligned_cols=40 Identities=13% Similarity=0.251 Sum_probs=30.3
Q ss_pred CHHHHHHHHhCCCeEEEeeCCCHHHHHHHHh----CCCCE-EEcC
Q 028497 144 DEKLVRTFHGRNKRVFAWTVDDEDSMRKMLH----ERVDA-VVTS 183 (208)
Q Consensus 144 ~~~~v~~~~~~g~~v~~wtv~~~~~~~~~~~----~gvd~-i~TD 183 (208)
+++.++++...|.+..+-.+++++++..+.+ .|+.. ++.|
T Consensus 39 ~~~~~~~W~~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~D 83 (117)
T 1rlk_A 39 NRDVFNEWYDEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQD 83 (117)
T ss_dssp CHHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CHHHHHHHHHCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 5788888899999999888888888777653 47554 5644
No 490
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=20.30 E-value=3e+02 Score=21.19 Aligned_cols=52 Identities=10% Similarity=0.055 Sum_probs=37.5
Q ss_pred HHHHHHHHhCCCeEEE--eeCC---CHHHHHHHHhCCCCEEEc-CChHHHHHHHHHHH
Q 028497 145 EKLVRTFHGRNKRVFA--WTVD---DEDSMRKMLHERVDAVVT-SNPILFQRVMQDIR 196 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~--wtv~---~~~~~~~~~~~gvd~i~T-D~P~~~~~~~~~~~ 196 (208)
..+.+.+.++|+.+.. +..+ -...+.++.+.++|+|+. -++..+..+++..+
T Consensus 168 ~~~~~~~~~~G~~v~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~ 225 (366)
T 3td9_A 168 NFFINKFTELGGQVKRVFFRSGDQDFSAQLSVAMSFNPDAIYITGYYPEIALISRQAR 225 (366)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCCCCHHHHHHHHHTCCSEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHHhcCCCEEEEccchhHHHHHHHHHH
Confidence 3456678899998643 3222 246788888999999998 67778887777665
No 491
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=20.25 E-value=1.1e+02 Score=21.57 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=21.7
Q ss_pred HHHHHH----HHhCCCeEEEee-C-CCHHHHHHHH----hCCCCEEEc
Q 028497 145 EKLVRT----FHGRNKRVFAWT-V-DDEDSMRKML----HERVDAVVT 182 (208)
Q Consensus 145 ~~~v~~----~~~~g~~v~~wt-v-~~~~~~~~~~----~~gvd~i~T 182 (208)
+.+.+. +++.|..+..++ + |+.+.+...+ +.++|.|+|
T Consensus 28 ~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~~DlVit 75 (167)
T 2g2c_A 28 PLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALKQGARFIIT 75 (167)
T ss_dssp HHHHHHHCC----CEEEEEEEEEECSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhHHhHHHHCCCEEeEEEEeCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 455666 778888876543 3 5655544443 336888887
No 492
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=20.19 E-value=1.4e+02 Score=23.31 Aligned_cols=38 Identities=3% Similarity=0.010 Sum_probs=28.9
Q ss_pred HHHHHHHHhCCCeEEEeeCCCHHHHHHHH-hCCCCEEEc
Q 028497 145 EKLVRTFHGRNKRVFAWTVDDEDSMRKML-HERVDAVVT 182 (208)
Q Consensus 145 ~~~v~~~~~~g~~v~~wtv~~~~~~~~~~-~~gvd~i~T 182 (208)
.++++.++++|+++.+-|-.....++..+ .+|++.++.
T Consensus 185 ~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~ 223 (317)
T 4eze_A 185 LTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS 223 (317)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE
Confidence 46789999999999999877666655554 568777655
No 493
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.15 E-value=1.3e+02 Score=22.31 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=24.2
Q ss_pred HHHHHHhCCCeEEEeeCC---C-----HHHHHHHHhCCCCEEEcC
Q 028497 147 LVRTFHGRNKRVFAWTVD---D-----EDSMRKMLHERVDAVVTS 183 (208)
Q Consensus 147 ~v~~~~~~g~~v~~wtv~---~-----~~~~~~~~~~gvd~i~TD 183 (208)
..++++++|++++.+... + ++..+.+.+.++|.|+.=
T Consensus 43 ~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a 87 (216)
T 2ywr_A 43 AIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKGVELVVLA 87 (216)
T ss_dssp HHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcCCCEEEEe
Confidence 356778888888776542 2 334455667788887764
No 494
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=20.07 E-value=3.2e+02 Score=21.38 Aligned_cols=81 Identities=11% Similarity=0.092 Sum_probs=50.5
Q ss_pred HHHHHHHhhccCCeEEEEEEecCCCchhhhHhhhhcCceEeecccccCHHHHHHHHh-C--CCeEEEeeCCCHHHHHHHH
Q 028497 97 NLVRDIMRLSSNVTAGYIIMVDPSTGFRTNLLRIRKAGVVGVYHPLIDEKLVRTFHG-R--NKRVFAWTVDDEDSMRKML 173 (208)
Q Consensus 97 ~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~--g~~v~~wtv~~~~~~~~~~ 173 (208)
+.++.+++..|..++.+.... . .-. .+. -..|++++.... .+++.++.+.+ . .+++.+=+-=+++.+..+.
T Consensus 197 ~ai~~~r~~~~~~kI~vev~t-l-ee~-~eA-~~aGaD~I~ld~--~~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a 270 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEVEVEN-L-DEL-DDA-LKAGADIIMLDN--FNTDQMREAVKRVNGQARLEVSGNVTAETLREFA 270 (296)
T ss_dssp HHHHHHHHHSTTSCEEEEESS-H-HHH-HHH-HHTTCSEEEESS--CCHHHHHHHHHTTCTTCCEEECCCSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEeCC-H-HHH-HHH-HHcCCCEEEECC--CCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHH
Confidence 457788887876566654431 1 101 111 236788776543 66665555443 2 3666666544899999999
Q ss_pred hCCCCEEEcC
Q 028497 174 HERVDAVVTS 183 (208)
Q Consensus 174 ~~gvd~i~TD 183 (208)
+.|||+|-+-
T Consensus 271 ~~GvD~isvG 280 (296)
T 1qap_A 271 ETGVDFISVG 280 (296)
T ss_dssp HTTCSEEECS
T ss_pred HcCCCEEEEe
Confidence 9999999874
Done!