BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028500
(208 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 60 WWDEVDQFLLLGAVPFPKDVPRLK-QLGVGGVITLNEPYETLV---PSSLYHAHGIDHLV 115
W+ +D +LLGA+P RL V GVIT+NE YET S + G++ L
Sbjct: 1 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 60
Query: 116 IPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPA 175
+ T D P+ ++ + V F G+ YVHCKAGR RS T+V YL++ + +P
Sbjct: 61 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPE 120
Query: 176 AALEYVRCRRPRVLLAPSQWKLI 198
A+E + R + + PSQ +++
Sbjct: 121 EAIEAIAKIRSHISIRPSQLEVL 143
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 60 WWDEVDQFLLLGAVPFPKDVPRLK-QLGVGGVITLNEPYETLV---PSSLYHAHGIDHLV 115
W+ +D +LLGA+P RL V GVIT+NE YET S + G++ L
Sbjct: 2 WYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 61
Query: 116 IPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPA 175
+ T D P+ ++ + V F G+ YVH KAGR RS T+V YL++ + +P
Sbjct: 62 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQVHNWSPE 121
Query: 176 AALEYVRCRRPRVLLAPSQWKLI 198
A+E + R + + PSQ +++
Sbjct: 122 EAIEAIAKIRSHISIRPSQLEVL 144
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 62 DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDY 121
DEV L LG + L++LG+ V+ + P + Y GI +L + D
Sbjct: 3 DEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEA-YEGLGIRYLGVEAHD- 60
Query: 122 LFAPSF---VDIRRAVDFIH-SNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAA 177
+P+F + + A DFIH + S G VHC G RS T+VL YL+ Y H+ A
Sbjct: 61 --SPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEA 118
Query: 178 LEYVRCRR 185
++ V+ R
Sbjct: 119 IKKVKDHR 126
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 62 DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETL---VPSSLYHAHGIDHLVIPT 118
+EV + +G +D+P+L++LG+ V+ E + ++ Y GI +L I
Sbjct: 29 NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKA 88
Query: 119 RDYLFAPSFVDIRRAVDFIHSNSCAGKT--TYVHCKAGRGRSTTIVLCYLVEYKHMAPAA 176
D RA DFI + A K VHC+ G RS T+V+ YL+ + M +
Sbjct: 89 NDTQEFNLSAYFERAADFIDQ-ALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 147
Query: 177 ALEYVRCRR 185
AL VR R
Sbjct: 148 ALSIVRQNR 156
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 62 DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETL---VPSSLYHAHGIDHLVIPT 118
+EV + +G +D+P+L++LG+ V+ E + ++ Y GI +L I
Sbjct: 30 NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKA 89
Query: 119 RDYLFAPSFVDIRRAVDFIHSNSCAGKT--TYVHCKAGRGRSTTIVLCYLVEYKHMAPAA 176
D RA DFI + A K VHC+ G RS T+V+ YL+ + M +
Sbjct: 90 NDTQEFNLSAYFERAADFIDQ-ALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 177 ALEYVRCRR 185
AL VR R
Sbjct: 149 ALSIVRQNR 157
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 62 DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDY 121
DEV L LG + L++LG+ V+ + P + Y GI +L + D
Sbjct: 4 DEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEA-YEGLGIRYLGVEAHD- 61
Query: 122 LFAPSF---VDIRRAVDFIH-SNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAA 177
+P+F + + A DFIH + S G VH G RS T+VL YL+ Y H+ A
Sbjct: 62 --SPAFDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEA 119
Query: 178 LEYVRCRR 185
++ V+ R
Sbjct: 120 IKKVKDHR 127
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 62 DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETL---VPSSLYHAHGIDHLVIPT 118
+EV + +G +D+P+L++LG+ V+ E + ++ Y GI +L I
Sbjct: 30 NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKA 89
Query: 119 RDYLFAPSFVDIRRAVDFIHSNSCAGKT--TYVHCKAGRGRSTTIVLCYLVEYKHMAPAA 176
D RA DFI + A K VH + G RS T+V+ YL+ + M +
Sbjct: 90 NDTQEFNLSAYFERAADFIDQ-ALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 177 ALEYVRCRR 185
AL VR R
Sbjct: 149 ALSIVRQNR 157
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
Query: 79 VPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFA----PSFVDIRRAV 134
+ K V +I LN+ + + + G DH D FA P+ ++ +
Sbjct: 211 IQYFKNHNVTTIIRLNK---RMYDAKRFTDAGFDH-----HDLFFADGSTPTDAIVKEFL 262
Query: 135 DFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQ 194
D + A VHCKAG GR+ T++ CY++++ M A + +VR RP ++ P Q
Sbjct: 263 DICEN---AEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ 319
Query: 195 WKLI 198
L+
Sbjct: 320 QFLV 323
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 112 DHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKH 171
+++ +P D AP + D IHS S T VHC AG RS T+ + YL+++ +
Sbjct: 71 EYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHN 130
Query: 172 MAPAAALEYVRCRRPRVLLAPSQWK 196
+ A +V+ RRP + W+
Sbjct: 131 VCLLEAYNWVKARRPVIRPNVGFWR 155
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 67 FLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPS 126
FL LG +D+ +++L +G VI + T +P Y ++ +P D +
Sbjct: 10 FLFLGNEQDAQDLDTMQRLNIGYVINVT----THLPLYHYEKGLFNYKRLPATD----SN 61
Query: 127 FVDIRR-----AVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYV 181
++R+ ++ C GK +HC+AG RS TIV+ YL+++ M A ++V
Sbjct: 62 KQNLRQYFEEAFEFIEEAHQC-GKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFV 120
Query: 182 RCRRPRVLLAPS 193
+ +RP +++P+
Sbjct: 121 KGKRP--IISPN 130
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 68 LLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSF 127
L LG KD+ +L + + +I+++E + L+ I +L IP D P
Sbjct: 15 LYLGNFIDAKDLDQLGRNKITHIISIHESPQPLL-------QDITYLRIPVADTPEVPIK 67
Query: 128 VDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRP 186
+ ++FIH G VH AG RSTTIV Y++ + LE ++ RP
Sbjct: 68 KHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRP 126
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 67 FLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPS 126
FL LG +D+ +++L +G VI + T +P Y ++ +P D +
Sbjct: 14 FLFLGNEQDAQDLDTMQRLNIGYVINVT----THLPLYHYEKGLFNYKRLPATD----SN 65
Query: 127 FVDIRR-----AVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYV 181
++R+ ++ C GK +HC+AG RS TIV+ YL+++ M A ++V
Sbjct: 66 KQNLRQYFEEAFEFIEEAHQC-GKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFV 124
Query: 182 RCRRPRVLLAPS 193
+ +RP +++P+
Sbjct: 125 KGKRP--IISPN 134
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 82 LKQLGVGGVITLNE---PYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIH 138
L LGV +++L E P+ P H I P D I R V +
Sbjct: 31 LLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPD--------QIDRFVQIVD 82
Query: 139 SNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQWKLI 198
+ G+ VHC G GR+ T++ CYLV+ + +A A+ +R RP + Q K +
Sbjct: 83 EANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAV 142
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 79 VPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFA----PSFVDIRRAV 134
+ K V +I LN+ + + + G DH D FA P+ ++ +
Sbjct: 211 IQYFKNHNVTTIIRLNK---RMYDAKRFTDAGFDH-----HDLFFADGSTPTDAIVKEFL 262
Query: 135 DFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQ 194
D + A VH KAG GR+ T++ CY++++ M A + +VR RP ++ P Q
Sbjct: 263 DICEN---AEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ 319
Query: 195 WKLI 198
L+
Sbjct: 320 QFLV 323
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 63 EVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGI-DHLVIPTRDY 121
E+ +L LG+ D+ L+ G+ V+ ++ S H G+ + IP D
Sbjct: 6 EILPYLFLGSCSHSSDLQGLQACGITAVLNVS-------ASCPNHFEGLFRYKSIPVEDN 58
Query: 122 LFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYV 181
+ A+ FI +G VH +AG RS TI L YL++ + + A ++V
Sbjct: 59 QMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFV 118
Query: 182 RCRR 185
+ RR
Sbjct: 119 KQRR 122
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 68 LLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSF 127
L +G +D +L + V ++++++ ++ G+ +L IP D
Sbjct: 14 LYIGNFKDARDAEQLSKNKVTHILSVHDSARPML-------EGVKYLCIPAADSPSQNLT 66
Query: 128 VDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVR----C 183
+ ++ FIH G++ VHC AG RS T+V+ Y++ AL VR C
Sbjct: 67 RHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSC 126
Query: 184 RRPRV 188
P V
Sbjct: 127 ANPNV 131
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 82 LKQLGVGGVITLNE---PYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIH 138
L LGV +++L E P+ P H I P D I R V +
Sbjct: 32 LLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPD--------QIDRFVQIVD 83
Query: 139 SNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQWKLI 198
+ G+ VHC G GR+ T + CYLV+ + +A A+ +R RP + Q K +
Sbjct: 84 EANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAV 143
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 109 HGIDHLVIPTRDY--LFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYL 166
HG++ +PT D F P+ I RA+ HS VHC GR RS T+VL YL
Sbjct: 108 HGVEADDLPTFDLSVFFYPAAAFIDRALSDDHSK------ILVHCVMGRSRSATLVLAYL 161
Query: 167 VEYKHMAPAAALEYV---RCRRP 186
+ +K M A++ V RC P
Sbjct: 162 MIHKDMTLVDAIQQVAKNRCVLP 184
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 62 DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNE-PYETLVPSSLYHAHGIDHLVIPTRD 120
DEV L LG +D +L QLG+ V+ ++ + Y +++ I D
Sbjct: 47 DEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADD 106
Query: 121 YLFAPSFVDIRRAVDFIHSN-SCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALE 179
F V +I + S VHC G RS T+VL +L+ Y++M A++
Sbjct: 107 NPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQ 166
Query: 180 YVRCRR 185
V+ R
Sbjct: 167 TVQAHR 172
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 116 IPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPA 175
IP D A + A+DFI G VH +AG RS TI + YL++ K
Sbjct: 55 IPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLK 114
Query: 176 AALEYVRCRRPRV 188
A +Y++ RR V
Sbjct: 115 EAFDYIKQRRSMV 127
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 62 DEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNE-PYETLVPSSLYHAHGIDHLVIPTRD 120
DEV L LG +D +L QLG+ V+ ++ + Y +++ I D
Sbjct: 47 DEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADD 106
Query: 121 YLFAPSFVDIRRAVDFIHSN-SCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALE 179
F V +I + S VHC G RS T+VL +L+ ++M A++
Sbjct: 107 NPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQ 166
Query: 180 YVRCRR 185
V+ R
Sbjct: 167 TVQAHR 172
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 125 PSFVDIRRAVD--FIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPA-AALEYV 181
P+ VD+ + +D + S +HCKAG+GR+ T+V +L+E A ALEY
Sbjct: 93 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKAGKGRTGTLVSSWLLEDGKFDTAKEALEYF 152
Query: 182 RCRR 185
RR
Sbjct: 153 GSRR 156
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 135 DFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRV 188
D IHS T +HC AG RS + L YL++Y M+ A + + RP +
Sbjct: 88 DHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPII 141
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 63 EVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYL 122
E+ FL LG+ L LG+ ++ ++ P+ + H + IP D
Sbjct: 6 EILPFLYLGSAYHAARRDMLDALGITALLNVSSD----CPNH-FEGH-YQYKCIPVEDNH 59
Query: 123 FAPSFVDIRRAVDFIHS-NSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYV 181
A A+++I + C G+ VH +AG RS TI L YL+ K + A E+V
Sbjct: 60 KADISSWFMEAIEYIDAVKDCRGRVL-VHSQAGISRSATICLAYLMMKKRVRLEEAFEFV 118
Query: 182 RCRR 185
+ RR
Sbjct: 119 KQRR 122
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 101 VPSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTT 160
VP+ YH + +H D A +D+ IH+ + + +HC+ G RS T
Sbjct: 83 VPAVEYHHYRWEH------DSQIA---LDLPSLTSIIHAATTKREKILIHCQCGLSRSAT 133
Query: 161 IVLCYLVEYKHMAPAAALEYVRCRRPRV 188
+++ Y+++Y +++ + + ++ R ++
Sbjct: 134 LIIAYIMKYHNLSLRHSYDLLKSRADKI 161
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 125 PSFVDIRRAVD--FIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAA-ALEYV 181
P+ VD+ + +D + S +HCK G+GR+ T+V +L+E A ALEY
Sbjct: 93 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYF 152
Query: 182 RCRR 185
RR
Sbjct: 153 GSRR 156
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 125 PSFVDIRRAVD--FIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPA-AALEYV 181
P+ VD+ + +D + S +HCK G+GR+ T+V +L+E A ALEY
Sbjct: 83 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYF 142
Query: 182 RCRR 185
RR
Sbjct: 143 GSRR 146
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 132 RAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRV 188
A++FI VHC AG RS T+ + YL++ H++ A + V+ ++ +
Sbjct: 70 EAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNI 126
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 125 PSFVDIRRAVD--FIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAA-ALEYV 181
P+ VD+ + +D + S +HCK G+GR+ T+V +L+E A ALEY
Sbjct: 105 PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEALEYF 164
Query: 182 RCRR 185
RR
Sbjct: 165 GSRR 168
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 104 SLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVL 163
S+ +G+ L IP D PS + ++ S + VHC G GR+ TI+
Sbjct: 53 SILKKNGLQPLHIPIPDG-GVPSDSQFLTIMKWLLSEK---EGNLVHCVGGIGRTGTILA 108
Query: 164 CYLVEYKHMAPAAALEYVRCRRP 186
YL+ + + +A++ VR RP
Sbjct: 109 SYLILTEGLEVESAIDEVRLVRP 131
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 126 SFVDIRRAVDFIH-SNSCAGKTTYVHCKAGRGRSTTIVLCYLV------EYKHMAPAAAL 178
S +D RR V+ + SC VHC G GRS T VL +V K + AA L
Sbjct: 209 SLLDFRRKVNKCYRGRSCP---IIVHCSDGAGRSGTYVLIDMVLNKMAKGAKEIDIAATL 265
Query: 179 EYVRCRRPRVLLAPSQWKL 197
E++R +RP ++ Q++
Sbjct: 266 EHLRDQRPGMVQTKEQFEF 284
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 149 VHCKAGRGRSTTIVLCYLVEY-KHMAPAAALEY---VRCRRPRVLLAPSQWKLI 198
+HCKAG+GR+ ++ YL+ K + AL++ VR R + + PSQ + +
Sbjct: 116 IHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYV 169
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 63 EVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYL 122
E+ FL LG ++ L++ G+ ++ + +P+ +A + IP D+
Sbjct: 6 EILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPN----LPNLFENAGEFKYKQIPISDHW 61
Query: 123 FAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVR 182
A+ FI VH AG RS T+ + YL++ +++ A + V+
Sbjct: 62 SQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVK 121
Query: 183 CRRPRV 188
++ +
Sbjct: 122 MKKSNI 127
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 25/115 (21%)
Query: 96 PYETLVPSSL--YHAHGIDHLVIPTRDY---LFAPSFVDIRRAV---------------- 134
PY + + S L HGI H++ ++ P+F + R +
Sbjct: 17 PYSSAMKSKLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFF 76
Query: 135 ----DFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRR 185
+FI + G VH AG RS V+ Y++E M A YV+ RR
Sbjct: 77 PMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYVQERR 131
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 66 QFLLLGAVPFPKDVP----RLKQLGVGGVITLNEPY--ETLVPSSLYHAHG--IDHLVIP 117
FL+L A P P ++P L+ GV ++ + P TLV S H D P
Sbjct: 24 HFLILDA-PSPSNLPTYIKELQHRGVRHLVRVCGPTYDATLVKSRGIDVHSWPFDDGAPP 82
Query: 118 TRDYLFA-PSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAA 176
TR L + +D A S T VHC AG GR+ +V LVEY +++
Sbjct: 83 TRAVLDSWLKLLDTELARQQ-EDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALD 141
Query: 177 ALEYVRCRR 185
A+ +R +R
Sbjct: 142 AIALIREKR 150
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 127 FVDIRRAVDFIH-SNSCAGKTTYVHCKAGRGRSTTIVLCYLV------EYKHMAPAAALE 179
+D RR V+ + SC VHC G GR+ T +L +V K + AA LE
Sbjct: 209 LLDFRRKVNKCYRGRSCP---IIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLE 265
Query: 180 YVRCRRPRVLLAPSQWKL 197
+VR +RP ++ + Q++
Sbjct: 266 HVRDQRPGLVRSKDQFEF 283
>pdb|3V0J|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
pdb|3V0J|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
Length = 334
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 125 PSFVDIRRAVD--FIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAA-ALEYV 181
P+ VD+ + +D + S +H K G+GR+ T+V +L+E A ALEY
Sbjct: 98 PTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYF 157
Query: 182 RCRRPRVL 189
RR V
Sbjct: 158 GSRRTDVF 165
>pdb|3V0E|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576(C363s)
Length = 324
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 125 PSFVDIRRAVD--FIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPA-AALEYV 181
P+ VD+ + +D + S +H K G+GR+ T+V +L+E A ALEY
Sbjct: 83 PTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYF 142
Query: 182 RCRR 185
RR
Sbjct: 143 GSRR 146
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 132 RAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRV 188
A++FI VH AG RS T+ + YL++ H++ A + V+ ++ +
Sbjct: 73 EAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNI 129
>pdb|3V0D|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0D|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0F|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0F|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0G|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|C Chain C, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|D Chain D, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0H|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
pdb|3V0H|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
Length = 339
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 125 PSFVDIRRAVD--FIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAA-ALEYV 181
P+ VD+ + +D + S +H K G+GR+ T+V +L+E A ALEY
Sbjct: 98 PTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYF 157
Query: 182 RCRR 185
RR
Sbjct: 158 GSRR 161
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Query: 90 VITLNEPY----ETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGK 145
++TLN+P E + +H HG + IP +D+ AV +
Sbjct: 465 LVTLNQPQARQGEQVRVVRQFHFHGWPEIGIPAE----GKGMIDLIAAVQKQQQQTGNHP 520
Query: 146 TTYVHCKAGRGRSTTIVLCYLVEYKHMAPA-----AALEYVRCRRPRVLLAPSQWKL 197
T VHC AG GR+ T + + + A A++ +R +RP ++ Q++
Sbjct: 521 IT-VHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEF 576
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 104 SLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVL 163
S+ +G+ L IP D PS + ++ S + VH G GR+ TI+
Sbjct: 53 SILKKNGLQPLHIPIPDG-GVPSDSQFLTIMKWLLSEK---EGNLVHSVGGIGRTGTILA 108
Query: 164 CYLVEYKHMAPAAALEYVRCRRP 186
YL+ + + +A++ VR RP
Sbjct: 109 SYLILTEGLEVESAIDEVRLVRP 131
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 68 LLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYL--FAP 125
LLLG+ D+ LK+ V ++ + E S + I L +P + L F
Sbjct: 11 LLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTY-KSISILDLPETNILSYFPE 69
Query: 126 SFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRR 185
F +FI VH AG R+ IV+ +L+ + + +A V+ R
Sbjct: 70 CF-------EFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNAR 122
Query: 186 PRV 188
P +
Sbjct: 123 PSI 125
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 144 GKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRP 186
G + V+CK GR RS + YL+ ++ + A + V+ RP
Sbjct: 89 GGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARP 131
>pdb|3F41|A Chain A, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
pdb|3F41|B Chain B, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
Length = 629
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 100 LVPSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRST 159
+ L +G+ + I D+++ PS +I ++F + A + HC+AG GR+T
Sbjct: 488 MTEQQLVEKNGLHYYRIAATDHIW-PSAANIDEFINFTRT-MPANAWLHFHCQAGAGRTT 545
Query: 160 TIVLCY 165
+ Y
Sbjct: 546 AYMAMY 551
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 109 HGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCY 165
HG ++ + +D+ F P D+ + ++F S Y HC AG GR+T ++ +
Sbjct: 199 HGANYFRLTLQDH-FRPDDPDVDKFLEFYKSLPKDAWLHY-HCYAGMGRTTIFMVMH 253
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 68 LLLGA-VPFPKDVPRLKQLGVGGVITLN-----EPYETLVPSSLYHAH---GIDHLVIPT 118
L++G+ + P+DV +L+++GV + L E + + S +A I H+
Sbjct: 20 LIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEI 79
Query: 119 RDYLFAPSFVDIRRAVDFI-----HSNSCAGKTTYVHCKAGRGRSTTIVLCY 165
RD+ D+R + + + G TYVH AG GR+ + L Y
Sbjct: 80 RDF----DAFDLRXRLPAVVGTLYKAVKRNGGVTYVHSTAGXGRAPAVALTY 127
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 112 DHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIV----LCYLV 167
DH V T D L ++ R V S VHC AG GR+ T + L Y +
Sbjct: 210 DHGVPDTTDLL-----INFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFIAIDRLIYQI 264
Query: 168 EYKHMAPAAALEY-VRCRRPRVLLAPSQW 195
E ++ + Y +R RP ++ Q+
Sbjct: 265 ENENTVDVYGIVYDLRMHRPLMVQTEDQY 293
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 140 NSCAGKT--TYVHCKAGRGRSTTIV-----LCYLVEYKHMAPAAALEYVRCRRPRVLLAP 192
N AGK VHC AG GR+ ++ +C + + + P + +R +R ++ P
Sbjct: 231 NKRAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTP 290
Query: 193 SQWKLI 198
SQ++ +
Sbjct: 291 SQYRFV 296
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 129 DIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIV-----LCYLVEYKHMAPAAALEYVRC 183
D V+++ S + VHC AG GR+ +V +C + P + +R
Sbjct: 194 DFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRD 253
Query: 184 RRPRVLLAPSQWKLI 198
+R ++ SQ+K +
Sbjct: 254 QRAMMVQTSSQYKFV 268
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 130 IRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIV 162
+R D+I+ + AG T VHC AG GR+ T +
Sbjct: 208 VRTVRDYINRSPGAGPTV-VHCSAGVGRTGTFI 239
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 130 IRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIV 162
+R D+I+ + AG T VHC AG GR+ T +
Sbjct: 224 VRTVRDYINRSPGAGPTV-VHCSAGVGRTGTFI 255
>pdb|2BOY|A Chain A, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|B Chain B, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|C Chain C, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|D Chain D, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|E Chain E, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|F Chain F, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|G Chain G, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|H Chain H, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
Length = 254
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 17/80 (21%)
Query: 35 AGARILFYPTLLYNVFRNKIQAEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLN 94
AG PTL +FR KI+ DE +F L VP P ++P+ N
Sbjct: 130 AGEYSFINPTLPDYLFRGKIRT-----DENGRFTLRTIVPAPYEIPK------------N 172
Query: 95 EPYETLVPSSLYHAHGIDHL 114
P L+ ++ +HA HL
Sbjct: 173 GPTGALLAAAGWHAWRPAHL 192
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 130 IRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIV 162
+R D+I+ + AG T VHC AG GR+ T +
Sbjct: 205 VRTVRDYINRSPGAGPTV-VHCSAGVGRTGTFI 236
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 82 LKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAP---SFVDIRRAVDFIH 138
+++L GV T+ E ++L GI L P D AP VD ++ I
Sbjct: 54 IEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDG--APPSNQIVDDWLSLVKIK 111
Query: 139 SNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRR 185
G VHC AG GR+ +V L+E M A++++R +R
Sbjct: 112 FREEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKR 157
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 149 VHCKAGRGRSTTIV----LCYLVEYKHMAPAAALEY-VRCRRPRVLLAPSQW 195
VHC AG GR+ T + L Y +E ++ + Y +R RP ++ Q+
Sbjct: 242 VHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQY 293
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 82 LKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAP---SFVDIRRAVDFIH 138
+++L GV T+ E ++L GI L P D AP VD ++ I
Sbjct: 54 IEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDD--GAPPSNQIVDDWLSLVKIK 111
Query: 139 SNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRR 185
G VHC AG GR+ +V L+E M A++++R +R
Sbjct: 112 FREEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKR 157
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 57 EFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGI 111
++RW ++D + + AV +PRL + G GG I + LVP++ +G+
Sbjct: 131 DWRWVIDIDLWGSIHAVE--AFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV 183
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 144 GKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRR 185
G VHC AG GR+ +V L+E M A++++R +R
Sbjct: 100 GSCVAVHCVAGLGRAPVLVALALIE-SGMKYEDAIQFIRQKR 140
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 144 GKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRR 185
G VHC AG GR+ +V L+E M A++++R +R
Sbjct: 97 GSCVAVHCVAGLGRAPVLVALALIE-SGMKYEDAIQFIRQKR 137
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 139 SNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALE 179
+ C G VHC G R+ +V YL+ +AP A++
Sbjct: 108 TEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAID 148
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.141 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,208,123
Number of Sequences: 62578
Number of extensions: 259385
Number of successful extensions: 769
Number of sequences better than 100.0: 60
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 714
Number of HSP's gapped (non-prelim): 62
length of query: 208
length of database: 14,973,337
effective HSP length: 94
effective length of query: 114
effective length of database: 9,091,005
effective search space: 1036374570
effective search space used: 1036374570
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.5 bits)