BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028501
(208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0J709|UP12_ORYSJ Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2
Length = 283
Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 163/207 (78%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V+IDQDS+ DATIV+++ GDRLG L+DTMNALK+LGL+V K +V + + K K IT
Sbjct: 77 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 136
Query: 62 RLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIH 121
+L TGRK+ +P+LLE +RLTIINN+++YHPE+S QLA+G FG + P + +DVDIATHI
Sbjct: 137 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 196
Query: 122 VKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAA 181
+ +DGP RSLL +ETADRPGLLV+++KII D+N+ V+S E DTEGL+AK KFHVSY G
Sbjct: 197 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVSYRGKP 256
Query: 182 LNSSLSQVLVNCLRYYLRRPETDIDSY 208
L +L QVL N LRY+LRRP T+ SY
Sbjct: 257 LIKALQQVLANSLRYFLRRPTTEEGSY 283
>sp|P83643|UP12_ORYSI Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
sativa subsp. indica GN=OsI_027381 PE=1 SV=2
Length = 283
Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 163/207 (78%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V+IDQDS+ DATIV+++ GDRLG L+DTMNALK+LGL+V K +V + + K K IT
Sbjct: 77 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 136
Query: 62 RLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIH 121
+L TGRK+ +P+LLE +RLTIINN+++YHPE+S QLA+G FG + P + +DVDIATHI
Sbjct: 137 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 196
Query: 122 VKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAA 181
+ +DGP RSLL +ETADRPGLLV+++KII D+N+ V+S E DTEGL+AK KFHVSY G
Sbjct: 197 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVSYRGKP 256
Query: 182 LNSSLSQVLVNCLRYYLRRPETDIDSY 208
L +L QVL N LRY+LRRP T+ SY
Sbjct: 257 LIKALQQVLANSLRYFLRRPTTEEGSY 283
>sp|Q9AC53|GLND_CAUCR [Protein-PII] uridylyltransferase OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=glnD PE=3 SV=1
Length = 940
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
Query: 12 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRK--V 69
S+A V ++ DR G D A+ LG +V V T + F + TG
Sbjct: 733 SNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGC 792
Query: 70 EDPDLLERIRLTI----INNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKED 125
E+P L R+ + + L P + AF I AP +D D + V E
Sbjct: 793 ENPRALRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAI-APSVTIDNDASNDATVVEA 851
Query: 126 GPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
+ DRPGLL + K +AD + ++SA ID G A D F+V
Sbjct: 852 SGR---------DRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYV 892
Score = 37.4 bits (85), Expect = 0.079, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V ID D+++DAT+V+ S DR G L L D L + ++ G F++
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 62 RLDTGR 67
+ G+
Sbjct: 894 TTEGGK 899
>sp|B8GWX0|GLND_CAUCN [Protein-PII] uridylyltransferase OS=Caulobacter crescentus (strain
NA1000 / CB15N) GN=glnD PE=3 SV=1
Length = 940
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
Query: 12 SDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRK--V 69
S+A V ++ DR G D A+ LG +V V T + F + TG
Sbjct: 733 SNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGC 792
Query: 70 EDPDLLERIRLTI----INNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKED 125
E+P L R+ + + L P + AF I AP +D D + V E
Sbjct: 793 ENPRALRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAI-APSVTIDNDASNDATVVEA 851
Query: 126 GPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
+ DRPGLL + K +AD + ++SA ID G A D F+V
Sbjct: 852 SGR---------DRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYV 892
Score = 37.4 bits (85), Expect = 0.079, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V ID D+++DAT+V+ S DR G L L D L + ++ G F++
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 62 RLDTGR 67
+ G+
Sbjct: 894 TTEGGK 899
>sp|Q7NTY6|GLND_CHRVO [Protein-PII] uridylyltransferase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=glnD PE=3 SV=1
Length = 856
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 124 EDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALN 183
+D +L I DRPGLL I K++AD ++V SA+I T G A+D F VS GAAL
Sbjct: 781 DDKDSDFILSIVAGDRPGLLARIAKVLADYRLNVRSAKIMTLGGRAEDSFQVS--GAALK 838
Query: 184 S-----SLSQVLVNCLR 195
+L L+ LR
Sbjct: 839 DDKTALALEAALITALR 855
>sp|Q3J5H6|GLND_RHOS4 [Protein-PII] uridylyltransferase OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=glnD PE=3 SV=1
Length = 930
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 6 IDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDT 65
+D D + DAT + D G AL +G +V T T F +
Sbjct: 732 LDPDPDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSE 791
Query: 66 GRKVEDPDLLERIRLT-IINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKE 124
G E L RLT +I+ LK + E L + K +++ THI
Sbjct: 792 GSPYEISRL---PRLTSMIDKTLKGEVVAREALKDRD----KLKKREAQFRFPTHIAFDN 844
Query: 125 DGPK-RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
+G +++ ++T DRPGLL ++ + +A N+ + SA I T G D F+V
Sbjct: 845 EGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896
>sp|Q5LWE5|GLND_RUEPO [Protein-PII] uridylyltransferase OS=Ruegeria pomeroyi (strain ATCC
700808 / DSM 15171 / DSS-3) GN=glnD PE=3 SV=1
Length = 908
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 11/175 (6%)
Query: 4 VLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDV--AKGTVNTEGSVKQTKFFIT 61
+ +D D + DAT + D G AL +G +V A+ +G V T F
Sbjct: 707 IRLDPDEDRDATRACFAMADHPGIFSRMAGALALVGANVVDARSYTTKDGYV--TDAFWI 764
Query: 62 RLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIH 121
+ G E L R+ I+ L E + A+ IK EK +V THI
Sbjct: 765 QDAEGHPYEAARL-PRLSQMILKTL---KGEVVARDALKSRDKIKKREKAFNV--PTHIT 818
Query: 122 VKEDGPK-RSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
+G +++ ++T DRPGLL ++ + +A NV + +A I T G D F+V
Sbjct: 819 FDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYV 873
>sp|Q5FPT6|GLND_GLUOX [Protein-PII] uridylyltransferase OS=Gluconobacter oxydans (strain
621H) GN=glnD PE=3 SV=1
Length = 949
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V+ID ++ T+++++ DR G L D +AL L ++ + T G ++ F
Sbjct: 856 PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYG-MRAVDVFYV 914
Query: 62 RLDTGRKVEDPDLLERIRLTIINNL 86
R G K+ DP L R+R T++ +L
Sbjct: 915 RDLLGMKITDPVRLARLRETLLASL 939
Score = 34.7 bits (78), Expect = 0.41, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
+ +++ + DRPGLL ++ ++ ++ + SA I T G+ A D F+V
Sbjct: 867 RHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYV 914
>sp|Q9RAE4|GLND_RHILV [Protein-PII] uridylyltransferase OS=Rhizobium leguminosarum bv.
viciae GN=glnD PE=3 SV=2
Length = 944
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL EI +++D+++D++SA I T G D F+V+
Sbjct: 836 KFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I ++ T++++ DR G L + L DL LD+ + T G F++T
Sbjct: 825 PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884
Query: 62 RLDTGRKV 69
L G+K+
Sbjct: 885 DL-VGQKI 891
>sp|Q53245|GLND_RHITR [Protein-PII] uridylyltransferase OS=Rhizobium tropici GN=glnD PE=3
SV=2
Length = 948
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL EI +++D+++D++SA I T G D F+V+
Sbjct: 837 KFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V+I ++ T++++ DR G L + L DL LD+ + T G F++
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 62 RLDTGRKVED 71
L G+K+ +
Sbjct: 886 DL-VGQKISN 894
>sp|Q8UIF1|GLND_AGRT5 [Protein-PII] uridylyltransferase OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=glnD PE=3 SV=1
Length = 942
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS--YGGAALNSS 185
K +++ +E DRPGLL ++ +IAD+++D+ SA I T G D F+V+ +G N +
Sbjct: 838 KFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKVTNDN 897
Query: 186 LSQVLVNCLRYYLRRPETDI 205
+ L+ + E ++
Sbjct: 898 RQASIAQRLKAVMSEQEDEL 917
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I ++ T++++ DR G L D + DL LD+ + T G F++T
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 62 RLDTGRKV 69
L G+KV
Sbjct: 887 DL-FGQKV 893
>sp|Q1QDM9|GLND_PSYCK [Protein-PII] uridylyltransferase OS=Psychrobacter cryohalolentis
(strain K5) GN=glnD PE=3 SV=1
Length = 913
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 106 KAPEKKLDVDIATHIHVK-EDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT 164
+ P + D+AT I+ D + ++ +ET D+PGLL + ++ ++V +A I T
Sbjct: 812 RIPRQLKHFDVATTINFDFNDASNQHIMSLETLDQPGLLARVGQVFLQQQIEVHAARITT 871
Query: 165 EGLVAKDKFHVS 176
G A+D F++S
Sbjct: 872 LGERAEDMFYIS 883
>sp|A5ICM0|GLND_LEGPC [Protein-PII] uridylyltransferase OS=Legionella pneumophila (strain
Corby) GN=glnD PE=3 SV=1
Length = 861
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 118 THIHVK-------EDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAK 170
TH +VK ++ ++ L++ T DRPGLL I ++ +N+ + +A+I T G +
Sbjct: 768 THFNVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVE 827
Query: 171 DKFHVS-YGGAALNSSLSQVL 190
D F++S G +LN +L
Sbjct: 828 DMFYISNQTGYSLNHEEKTIL 848
>sp|Q5ZUS2|GLND_LEGPH [Protein-PII] uridylyltransferase OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=glnD PE=3 SV=1
Length = 861
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 118 THIHVK-------EDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAK 170
TH +VK ++ ++ L++ T DRPGLL I ++ +N+ + +A+I T G +
Sbjct: 768 THFNVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVE 827
Query: 171 DKFHVS-YGGAALNSSLSQVL 190
D F++S G +LN +L
Sbjct: 828 DMFYISNQTGYSLNHEEKTIL 848
>sp|Q5WVX6|GLND_LEGPL [Protein-PII] uridylyltransferase OS=Legionella pneumophila (strain
Lens) GN=glnD PE=3 SV=1
Length = 861
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 118 THIHVK-------EDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAK 170
TH +VK ++ ++ L++ T DRPGLL I ++ +N+ + +A+I T G +
Sbjct: 768 THFNVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVE 827
Query: 171 DKFHVS-YGGAALNSSLSQVL 190
D F++S G +LN +L
Sbjct: 828 DMFYISNQTGYSLNHEEKTIL 848
>sp|Q5X4J1|GLND_LEGPA [Protein-PII] uridylyltransferase OS=Legionella pneumophila (strain
Paris) GN=glnD PE=3 SV=1
Length = 861
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 118 THIHVK-------EDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAK 170
TH +VK ++ ++ L++ T DRPGLL I ++ +N+ + +A+I T G +
Sbjct: 768 THFNVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVE 827
Query: 171 DKFHVS-YGGAALNSSLSQVL 190
D F++S G +LN +L
Sbjct: 828 DMFYISNQTGYSLNHEEKTIL 848
>sp|Q4FUP5|GLND_PSYA2 [Protein-PII] uridylyltransferase OS=Psychrobacter arcticus (strain
DSM 17307 / 273-4) GN=glnD PE=3 SV=1
Length = 915
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 106 KAPEKKLDVDIATHIHVK-EDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT 164
+ P + D+ T I+ + D + ++ +ET D+PGLL + ++ ++V +A I T
Sbjct: 814 RIPRQLKHFDVETTINFEFNDASSQHIMSLETLDQPGLLARVGQVFLQQQIEVHAARITT 873
Query: 165 EGLVAKDKFHVS 176
G A+D F++S
Sbjct: 874 LGERAEDMFYIS 885
>sp|Q8G312|GLND_BRUSU [Protein-PII] uridylyltransferase OS=Brucella suis biovar 1 (strain
1330) GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|B0CIQ3|GLND_BRUSI [Protein-PII] uridylyltransferase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|A5VN81|GLND_BRUO2 [Protein-PII] uridylyltransferase OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|Q8YES3|GLND_BRUME [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|Q57FN0|GLND_BRUAB [Protein-PII] uridylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|Q2YNZ1|GLND_BRUA2 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain 2308)
GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|B2S8D8|GLND_BRUA1 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain S19)
GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|C0RGK0|GLND_BRUMB [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVED 71
L G K+ +
Sbjct: 894 DL-VGHKISN 902
>sp|A6WV84|GLND_OCHA4 [Protein-PII] uridylyltransferase OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=glnD PE=3 SV=1
Length = 934
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
K +++ +E DRPGLL E+ +I+D+++D+ SA I T G D F+V+
Sbjct: 845 KFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ ++ T++++ DR G L + + DL LD+A + T G F++T
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 62 RLDTGRKVEDPDLLERIRLTIINNL 86
L G K+ + IR ++ L
Sbjct: 894 DL-VGHKISNATRQGNIRRKLLGVL 917
>sp|A5ETJ9|GLND_BRASB [Protein-PII] uridylyltransferase OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=glnD PE=3 SV=1
Length = 931
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 138 DRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS-YGGAALNSSLSQVLV 191
DRPGLL E+ I+ +N+++ SA + T G A+D F+V+ GA +N+ Q +
Sbjct: 858 DRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQAAI 912
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ + T++++S DR G L + A+ L L++A V T G + F++T
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 62 RLDTGRKVEDP 72
L G ++ P
Sbjct: 897 DL-LGAQINAP 906
>sp|A4YKP3|GLND_BRASO [Protein-PII] uridylyltransferase OS=Bradyrhizobium sp. (strain
ORS278) GN=glnD PE=3 SV=1
Length = 931
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 138 DRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS-YGGAALNSSLSQVLV 191
DRPGLL E+ I+ +N+++ SA + T G A+D F+V+ GA +N+ Q +
Sbjct: 858 DRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQAAI 912
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ + T++++S DR G L + A+ L L++A V T G + F++T
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 62 RLDTGRKVEDP 72
L G ++ P
Sbjct: 897 DL-LGAQINAP 906
>sp|Q98C27|GLND_RHILO [Protein-PII] uridylyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=glnD PE=3 SV=1
Length = 933
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 130 SLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
S++ +E DRPGLL EI ++D+++D+ SA I T G D F+V+
Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P I ++ +++++ DR G L + L DL LD+A + T G F++T
Sbjct: 834 PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893
Query: 62 RLDTGRKVEDPDLLERIRLTIINNLLKYHPE 92
L TG+K++ P + IR ++ L PE
Sbjct: 894 DL-TGQKIDSPARIATIRNRLMATLEGIAPE 923
>sp|B4RC79|GLND_PHEZH [Protein-PII] uridylyltransferase OS=Phenylobacterium zucineum
(strain HLK1) GN=glnD PE=3 SV=1
Length = 938
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 16/159 (10%)
Query: 23 DRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFITRLDTGRKV--EDPDLLERIRL 80
DR +D A+ G +V V T + + F + +G+ DP L R+
Sbjct: 741 DRPRLFVDLAEAITAAGANVMGARVFTSRAGQALDVFYVQDASGQPFGSHDPRALARLAE 800
Query: 81 TII----NNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDIATHIHVKEDGPKRSLLYIET 136
T+ + P + L AF I P LD E +++
Sbjct: 801 TLACAARGEPVAREPRKPQDLGRTAAFAI-TPAVMLD---------NEASETSTVVEASG 850
Query: 137 ADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
DRPGLL + + I+D + + SA ID G A D F+V
Sbjct: 851 RDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYV 889
Score = 37.0 bits (84), Expect = 0.10, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V++D +++ +T+V+ S DR G L + D GL + ++ G F++
Sbjct: 831 PAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYVV 890
Query: 62 RLDTGRKVED 71
D GRK+ D
Sbjct: 891 DAD-GRKLTD 899
>sp|Q89VX9|GLND_BRAJA [Protein-PII] uridylyltransferase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=glnD PE=3 SV=2
Length = 929
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS-YGGAALNSSL 186
+ +++ + DRPGLL E+ I+ +N+++ SA + T G A+D F+V+ GA +N+
Sbjct: 847 RYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPT 906
Query: 187 SQ 188
Q
Sbjct: 907 RQ 908
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P V I+ + T++++S DR G L + A+ L L++A V T G + F++T
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 62 RLDTGRKVEDP 72
L G ++ P
Sbjct: 896 DL-LGAQINAP 905
>sp|Q8RQD1|GLND_AZOBR [Protein-PII] uridylyltransferase OS=Azospirillum brasilense
GN=glnD PE=3 SV=1
Length = 933
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
P VLID ++++ T+++++ DR G L D AL +L L ++ ++T G K F
Sbjct: 845 PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGE-KAIDVFYV 903
Query: 62 RLDTGRKVEDPDLLERIRLTIINNL 86
+ G KV + L +IR +++ L
Sbjct: 904 KDVFGLKVTHENKLAQIRERLLHAL 928
Score = 34.3 bits (77), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 130 SLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
+++ + DRPGLL ++ + + ++ + + SA+I T G A D F+V
Sbjct: 858 TVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903
>sp|B9JZI2|GLND_AGRVS [Protein-PII] uridylyltransferase OS=Agrobacterium vitis (strain S4
/ ATCC BAA-846) GN=glnD PE=3 SV=1
Length = 941
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHV 175
K +++ IE DR GLL E+ ++AD+++D+ SA I T G D F+V
Sbjct: 837 KFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYV 884
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 2 PHVLIDQDSNSDATIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVNTEGSVKQTKFFIT 61
PHV I ++ T++++ DR+G L + L DL LD+ + T G F++
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 62 RLDTGRKVEDPDLLERIRLTIINNLLKYHPESSEQLAMG 100
L G+K+ + + I + + + + E EQ+ G
Sbjct: 886 DL-VGQKITNENRQGSISVRLKAVMSEQPDELREQMPSG 923
>sp|Q31G41|GLND_THICR [Protein-PII] uridylyltransferase OS=Thiomicrospira crunogena
(strain XCL-2) GN=glnD PE=3 SV=1
Length = 888
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 108 PEKKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGL 167
P + ++ THI +E + + L I T D PGLL +I + + V A+I+T G
Sbjct: 794 PRRIRVFEMPTHIQFQEINEELTELSISTKDIPGLLAKIGQAFKSCKIRVHDAKINTVGE 853
Query: 168 VAKDKFHVS 176
A+D F +S
Sbjct: 854 KAEDTFMIS 862
>sp|Q3SWE0|GLND_NITWN [Protein-PII] uridylyltransferase OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=glnD PE=3 SV=1
Length = 925
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
+ +++ + DRPGLL ++ I+ +N+++ SA + T G A+D F+V+
Sbjct: 846 RHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894
>sp|Q485H4|GLND_COLP3 [Protein-PII] uridylyltransferase OS=Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) GN=glnD PE=3 SV=1
Length = 878
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 110 KKLDVDIATHIHVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVA 169
KK V + + +K R+++ I DRPGLL I ++ + V++ SA+I T G A
Sbjct: 789 KKFKVPLRVNF-IKIHAKNRTMIEIIALDRPGLLSNISQVFLEARVNIHSAKITTFGEKA 847
Query: 170 KDKFHVS 176
D F +S
Sbjct: 848 DDVFTIS 854
>sp|Q87MD6|GLND_VIBPA [Protein-PII] uridylyltransferase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=glnD PE=3 SV=1
Length = 874
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 106 KAPEKKLDVDIATHI-HVKEDGPKRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDT 164
+ P K ++ T + + G K +L+ D PGLL ++ + AD+N+++ A+I T
Sbjct: 774 RTPNKLQHFNVKTKVDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITT 833
Query: 165 EGLVAKDKF 173
G A+D F
Sbjct: 834 IGERAEDLF 842
>sp|Q1QRM1|GLND_NITHX [Protein-PII] uridylyltransferase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=glnD PE=3 SV=1
Length = 931
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
+ +++ + DRPGLL ++ I+ +N+++ SA + T G A+D F+V+
Sbjct: 848 RHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVT 896
>sp|Q2SX00|GLND_BURTA [Protein-PII] uridylyltransferase OS=Burkholderia thailandensis
(strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)
GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.034, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|Q63T10|GLND_BURPS [Protein-PII] uridylyltransferase OS=Burkholderia pseudomallei
(strain K96243) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.034, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|Q62JC2|GLND_BURMA [Protein-PII] uridylyltransferase OS=Burkholderia mallei (strain
ATCC 23344) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.034, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|A3NAV0|GLND_BURP6 [Protein-PII] uridylyltransferase OS=Burkholderia pseudomallei
(strain 668) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|Q3JR26|GLND_BURP1 [Protein-PII] uridylyltransferase OS=Burkholderia pseudomallei
(strain 1710b) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|A3NWN4|GLND_BURP0 [Protein-PII] uridylyltransferase OS=Burkholderia pseudomallei
(strain 1106a) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|A1V572|GLND_BURMS [Protein-PII] uridylyltransferase OS=Burkholderia mallei (strain
SAVP1) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|A2SB69|GLND_BURM9 [Protein-PII] uridylyltransferase OS=Burkholderia mallei (strain
NCTC 10229) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|A3MKU6|GLND_BURM7 [Protein-PII] uridylyltransferase OS=Burkholderia mallei (strain
NCTC 10247) GN=glnD PE=3 SV=1
Length = 858
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 131 LLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGGAALNSSLSQVL 190
+L + DRPGLL I +++A+ V V +A I+T G +D F + G + N QV
Sbjct: 790 ILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFMLDGTGLSDNRLQIQVE 849
Query: 191 VNCLR 195
LR
Sbjct: 850 TELLR 854
>sp|Q0T842|GLND_SHIF8 [Protein-PII] uridylyltransferase OS=Shigella flexneri serotype 5b
(strain 8401) GN=glnD PE=3 SV=1
Length = 890
Score = 38.5 bits (88), Expect = 0.037, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGG-AALNSSL 186
++S L + D+PGLL + KI AD+ + + A I T G +D F ++ ALN+ L
Sbjct: 813 RKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALNNEL 872
Query: 187 SQ 188
Q
Sbjct: 873 QQ 874
>sp|A5WCX0|GLND_PSYWF [Protein-PII] uridylyltransferase OS=Psychrobacter sp. (strain
PRwf-1) GN=glnD PE=3 SV=1
Length = 899
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 91 PESSEQLAMGEAFGIKAPE------KKL-----DVDIATHIHVK-EDGPKRSLLYIETAD 138
PES E+L K PE K+L + + T I + ++ ++ + T D
Sbjct: 775 PESREELTRRLIDAFKNPETPKLVQKRLPRRLKNFQVPTTIDFNYNEASRQHVMSLTTLD 834
Query: 139 RPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVS 176
+PGLL I ++ + ++V +A I T G A+D F++S
Sbjct: 835 QPGLLARIGQVFLNEGIEVHAARITTLGERAEDMFYIS 872
>sp|Q83MD4|GLND_SHIFL [Protein-PII] uridylyltransferase OS=Shigella flexneri GN=glnD PE=3
SV=1
Length = 890
Score = 38.1 bits (87), Expect = 0.039, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 128 KRSLLYIETADRPGLLVEIMKIIADVNVDVESAEIDTEGLVAKDKFHVSYGG-AALNSSL 186
++S L + D+PGLL + KI AD+ + + A I T G +D F ++ ALN+ L
Sbjct: 813 RKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALNNEL 872
Query: 187 SQ 188
Q
Sbjct: 873 QQ 874
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,103,158
Number of Sequences: 539616
Number of extensions: 3002816
Number of successful extensions: 8626
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 8376
Number of HSP's gapped (non-prelim): 258
length of query: 208
length of database: 191,569,459
effective HSP length: 112
effective length of query: 96
effective length of database: 131,132,467
effective search space: 12588716832
effective search space used: 12588716832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)