BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028507
(208 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224126375|ref|XP_002329538.1| predicted protein [Populus trichocarpa]
gi|222870247|gb|EEF07378.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/208 (93%), Positives = 205/208 (98%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEGEAK+RELNVMFIETSAKAGFNIKPLFRKIAAALPGME LSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMEALSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ST G+ASQ+Q+QS GC+C
Sbjct: 181 QEDMVDVNLKSTGGSASQNQAQSGGCAC 208
>gi|623586|gb|AAA74117.1| putative [Nicotiana tabacum]
Length = 208
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/208 (93%), Positives = 202/208 (97%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV L
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVAL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEE EAK+RELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEAEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S+ NASQSQ+QS GC+C
Sbjct: 181 QEDMVDVNLKSSNANASQSQAQSGGCAC 208
>gi|255571107|ref|XP_002526504.1| protein with unknown function [Ricinus communis]
gi|223534179|gb|EEF35895.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/208 (93%), Positives = 203/208 (97%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGEAK+R+LNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S+ NASQSQ QS GC+C
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQSGGCAC 208
>gi|449461547|ref|XP_004148503.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
gi|449528471|ref|XP_004171228.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
Length = 208
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/208 (93%), Positives = 202/208 (97%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEGEAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ST A+QSQ QSSGC+C
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
>gi|255575776|ref|XP_002528787.1| protein with unknown function [Ricinus communis]
gi|223531790|gb|EEF33609.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/208 (92%), Positives = 204/208 (98%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQ+FLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEGEAK+R+LNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ST+ ASQSQ+QS GC+C
Sbjct: 181 QEDMVDVNLKSTSKTASQSQAQSGGCAC 208
>gi|15224916|ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|297828175|ref|XP_002881970.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|75318653|sp|O80501.1|RAH1B_ARATH RecName: Full=Ras-related protein RABH1b; Short=AtRABH1b; AltName:
Full=Ras-related protein Rab6A; Short=AtRab6A
gi|3341681|gb|AAC27463.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|21593488|gb|AAM65455.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis thaliana]
gi|110742258|dbj|BAE99055.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|297327809|gb|EFH58229.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|330255353|gb|AEC10447.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|741994|prf||2008312A GTP-binding protein
Length = 208
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/208 (92%), Positives = 201/208 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQSFLNT+KWIDEVRTERGSDVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEE EAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S+ NAS +Q QS GCSC
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208
>gi|225453266|ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
Length = 208
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/208 (92%), Positives = 202/208 (97%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQSFLNT+KWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGEAK+R+LNVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S+ NASQSQ Q+ GCSC
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQAGGCSC 208
>gi|356497062|ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 207
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/208 (93%), Positives = 203/208 (97%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNT+KWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEGEAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+STTG+A QSQ Q SGC+C
Sbjct: 181 QEDMVDVNLKSTTGSA-QSQPQPSGCAC 207
>gi|224067425|ref|XP_002302484.1| predicted protein [Populus trichocarpa]
gi|222844210|gb|EEE81757.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/208 (91%), Positives = 203/208 (97%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWI+EVR+ERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGEAK+R+LNVMFIETSAKAGFNIK LFRKIAAALPGMETLSS+K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S+ NASQSQ QS GC+C
Sbjct: 181 QEDMVDVNLKSSNANASQSQQQSGGCAC 208
>gi|226498830|ref|NP_001142363.1| hypothetical protein [Zea mays]
gi|194708444|gb|ACF88306.1| unknown [Zea mays]
gi|414886777|tpg|DAA62791.1| TPA: hypothetical protein ZEAMMB73_332722 [Zea mays]
Length = 208
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/208 (91%), Positives = 200/208 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWIDEVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGE K+++L VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNLRS N+SQSQ+Q+ GCSC
Sbjct: 181 QEDMVDVNLRSGNANSSQSQAQAGGCSC 208
>gi|414886776|tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, partial [Zea mays]
Length = 249
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/208 (91%), Positives = 200/208 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWIDEVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGE K+++L VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNLRS N+SQSQ+Q+ GCSC
Sbjct: 181 QEDMVDVNLRSGNANSSQSQAQAGGCSC 208
>gi|226501020|ref|NP_001150271.1| ras-related protein Rab-6A [Zea mays]
gi|242045718|ref|XP_002460730.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|194701460|gb|ACF84814.1| unknown [Zea mays]
gi|195637990|gb|ACG38463.1| ras-related protein Rab-6A [Zea mays]
gi|241924107|gb|EER97251.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|414590332|tpg|DAA40903.1| TPA: Ras protein Rab-6A [Zea mays]
Length = 208
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/208 (90%), Positives = 200/208 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGE K+++L VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNLRS N+SQSQ+Q+ GCSC
Sbjct: 181 QEDMVDVNLRSGNANSSQSQAQAGGCSC 208
>gi|357116841|ref|XP_003560185.1| PREDICTED: ras-related protein RABH1b-like [Brachypodium
distachyon]
Length = 293
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/208 (90%), Positives = 200/208 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 86 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 145
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 146 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 205
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGE K+++L VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 206 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 265
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S N+SQSQ+Q+ GCSC
Sbjct: 266 QEDMVDVNLKSGNANSSQSQAQAGGCSC 293
>gi|388498202|gb|AFK37167.1| unknown [Medicago truncatula]
Length = 206
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/208 (91%), Positives = 200/208 (96%), Gaps = 2/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNTSKWI+EVR+ERGSDVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVS EEGEAKSRELNVMFIETSAKAGFNIK LFRKIAAALPGMETLS+TK
Sbjct: 121 GNKTDLVEKRQVSTEEGEAKSRELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSTTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNLRS+T + SQ QS GCSC
Sbjct: 181 QEDMVDVNLRSSTSH--DSQPQSGGCSC 206
>gi|357482281|ref|XP_003611426.1| Ras-related protein Rab-6 [Medicago truncatula]
gi|355512761|gb|AES94384.1| Ras-related protein Rab-6 [Medicago truncatula]
Length = 226
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/226 (84%), Positives = 203/226 (89%), Gaps = 18/226 (7%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNT+KWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTTKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIE+GEAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEDGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNA------------------SQSQSQSSGCSC 208
QE++VDVNL+S++GNA +SQ QS GCSC
Sbjct: 181 QEDLVDVNLKSSSGNAQSQTQSNMVDVNLKSSSCHESQPQSGGCSC 226
>gi|356497064|ref|XP_003517384.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 206
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/208 (90%), Positives = 197/208 (94%), Gaps = 2/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+ YDVASRQ+FLNTSKWI+EVR+ERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIAYDVASRQTFLNTSKWIEEVRSERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVS EEGEAKSRELNVMFIE SAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNLRS+ G QSQ QS GC+C
Sbjct: 181 QEDMVDVNLRSSGGY--QSQPQSGGCAC 206
>gi|225427294|ref|XP_002281823.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
gi|147782540|emb|CAN75036.1| hypothetical protein VITISV_014840 [Vitis vinifera]
Length = 208
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/208 (93%), Positives = 205/208 (98%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEGEAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S++G+ASQSQ+Q+ GCSC
Sbjct: 181 QEDMVDVNLKSSSGSASQSQTQARGCSC 208
>gi|356541335|ref|XP_003539133.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 236
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/203 (93%), Positives = 197/203 (97%), Gaps = 1/203 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNT+KWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEGEAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQS 203
QE+MVDVNL+ST G+A QSQ QS
Sbjct: 181 QEDMVDVNLKSTNGSA-QSQPQS 202
>gi|255640576|gb|ACU20573.1| unknown [Glycine max]
Length = 213
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/203 (93%), Positives = 197/203 (97%), Gaps = 1/203 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNT+KWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEGEAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQS 203
QE+MVDVNL+ST G+A QSQ QS
Sbjct: 181 QEDMVDVNLKSTNGSA-QSQPQS 202
>gi|356525473|ref|XP_003531349.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/208 (88%), Positives = 197/208 (94%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNT+KW++EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEG+AKSRE +MFIETSAKAGFNIKPLFRKIAAALPGME+LSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMESLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ T N+SQ++ Q GCSC
Sbjct: 181 QEDMVDVNLKPTV-NSSQTEQQGGGCSC 207
>gi|356512701|ref|XP_003525055.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/208 (88%), Positives = 197/208 (94%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNT+KW++EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+AKSRE +MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ T N+SQ++ Q GCSC
Sbjct: 181 QEDMVDVNLKPTV-NSSQTEQQGGGCSC 207
>gi|449451431|ref|XP_004143465.1| PREDICTED: ras-related protein RABH1e-like [Cucumis sativus]
gi|449496434|ref|XP_004160133.1| PREDICTED: ras-related protein RABH1e-like [Cucumis sativus]
Length = 207
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/208 (88%), Positives = 196/208 (94%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSFLNT+KWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEG+AKSRE VMFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ N+SQS+ Q GC+C
Sbjct: 181 QEDMVDVNLKPAV-NSSQSEQQGGGCAC 207
>gi|356567704|ref|XP_003552057.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/208 (89%), Positives = 196/208 (94%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD YQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDINYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVA+RQSFLNT+KWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTNKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEG+AKSRE +MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSRESGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ T N+SQ++ Q GCSC
Sbjct: 181 QEDMVDVNLKPTV-NSSQAEQQGGGCSC 207
>gi|356563429|ref|XP_003549965.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 213
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/201 (91%), Positives = 194/201 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNTSKWI+EVR+ERGSDVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVS EEGEAKSRELNVMFIE SAKAGFNIK LFRKIAAALPGMETLS+TK
Sbjct: 121 GNKTDLVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSTTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQS 201
QE+MVDVNLRS+ + SQ QS
Sbjct: 181 QEDMVDVNLRSSGSHDSQPQS 201
>gi|224083679|ref|XP_002307084.1| predicted protein [Populus trichocarpa]
gi|222856533|gb|EEE94080.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/208 (87%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNTSKWI+EVRTERG DVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGGDVIVVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ K+RE VMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDGKAREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ T N+SQ++ Q GC+C
Sbjct: 181 QEDMVDVNLKPTV-NSSQAEQQGGGCAC 207
>gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis]
Length = 207
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/208 (87%), Positives = 198/208 (95%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVA+RQSFLNT++WI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+AK+RE VMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKAREFGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ T N+SQ++ ++ GCSC
Sbjct: 181 QEDMVDVNLKPTV-NSSQAEQKAGGCSC 207
>gi|351723117|ref|NP_001235476.1| uncharacterized protein LOC100527651 [Glycine max]
gi|255632858|gb|ACU16782.1| unknown [Glycine max]
Length = 213
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/202 (90%), Positives = 194/202 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVASRQ+FLNTSKWI+EVR+ERGSDVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVS EEGEAKSRELNVMFIE SAKAGFNIK LFRKI AALPGMETLS+TK
Sbjct: 121 GNKTDLVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIDAALPGMETLSTTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQ 202
QE+MVDVNLRS+ + SQ QS+
Sbjct: 181 QEDMVDVNLRSSGSHDSQPQSR 202
>gi|297807057|ref|XP_002871412.1| hypothetical protein ARALYDRAFT_487852 [Arabidopsis lyrata subsp.
lyrata]
gi|297317249|gb|EFH47671.1| hypothetical protein ARALYDRAFT_487852 [Arabidopsis lyrata subsp.
lyrata]
Length = 207
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/208 (87%), Positives = 197/208 (94%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNTSKWI++VRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ K+R+ V+FIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+++T N+SQ + Q GCSC
Sbjct: 181 QEDMVDVNLKTST-NSSQGEQQRGGCSC 207
>gi|255580884|ref|XP_002531261.1| protein with unknown function [Ricinus communis]
gi|223529146|gb|EEF31125.1| protein with unknown function [Ricinus communis]
Length = 207
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/208 (86%), Positives = 196/208 (94%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNTSKWI+EVRTERGSDVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIVVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ K++E VMFIETSAKAGFNIKPLFRKIA+ALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKAKEFGVMFIETSAKAGFNIKPLFRKIASALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ + N+SQ++ Q GC+C
Sbjct: 181 QEDMVDVNLKPSV-NSSQNEQQGGGCAC 207
>gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6 [Oryza sativa Japonica Group]
gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa Japonica Group]
Length = 208
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/208 (90%), Positives = 201/208 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGE K+++L VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+S+ N+SQSQ+Q+ GCSC
Sbjct: 181 QEDMVDVNLKSSNANSSQSQAQAGGCSC 208
>gi|145357850|ref|NP_196588.3| RAB GTPase H1E [Arabidopsis thaliana]
gi|75334962|sp|Q9LFT9.1|RAH1E_ARATH RecName: Full=Ras-related protein RABH1e; Short=AtRABH1e
gi|8953407|emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana]
gi|332004131|gb|AED91514.1| RAB GTPase H1E [Arabidopsis thaliana]
Length = 207
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/208 (86%), Positives = 196/208 (94%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNTSKWI++VRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ K+R+ V+FIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ T+ N++Q + Q GC+C
Sbjct: 181 QEDMVDVNLK-TSSNSAQGEQQRGGCAC 207
>gi|359497196|ref|XP_002271220.2| PREDICTED: ras-related protein RABH1e-like [Vitis vinifera]
Length = 207
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/208 (86%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAVVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV +RQSFLNTSKWI+EVRTERG+DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVGNRQSFLNTSKWIEEVRTERGTDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KSR+ VMFIETSAKAGFNIKPLFRKIA+ALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDTKSRDFGVMFIETSAKAGFNIKPLFRKIASALPGMETLSSTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
QE+MVDVNL+ + N+SQ++ Q GC+C
Sbjct: 181 QEDMVDVNLKPSV-NSSQTEQQGGGCAC 207
>gi|356538150|ref|XP_003537567.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 233
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/202 (89%), Positives = 192/202 (95%), Gaps = 1/202 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
LAKYKLVFLGDQSVGKTSIITRFMYDKFD YQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 33 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTNYQATIGIDFLSKTMYLEDRTVRLQLWDTA 92
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNT+KWI+EVRTERGSDVIIVLVGNKTDL
Sbjct: 93 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWIEEVRTERGSDVIIVLVGNKTDL 152
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
VEKRQVSIEEG+AKSRE +MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE+MVD
Sbjct: 153 VEKRQVSIEEGDAKSRESGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 212
Query: 187 VNLRSTTGNASQSQSQSSGCSC 208
VNL+ T N+SQ++ Q GCSC
Sbjct: 213 VNLKPTV-NSSQTEQQGGGCSC 233
>gi|297821449|ref|XP_002878607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324446|gb|EFH54866.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 207
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/208 (86%), Positives = 190/208 (91%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVA+R SFLNTSKWI+EVRTER DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRTERAGDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEG++K RE VMFIETSAKAGFNIKPLFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
E+MVDVNL+ T+ N+SQ Q GCSC
Sbjct: 181 NEDMVDVNLKPTS-NSSQGDQQGGGCSC 207
>gi|242046344|ref|XP_002461043.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
gi|241924420|gb|EER97564.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
Length = 209
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/210 (86%), Positives = 195/210 (92%), Gaps = 3/210 (1%)
Query: 1 MAP--VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV 58
MAP VSALAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTV
Sbjct: 1 MAPAVVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV 60
Query: 59 RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIV 118
RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSFLNTSKWIDEVRTERG DVIIV
Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSKWIDEVRTERGGDVIIV 120
Query: 119 LVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
LVGNKTDLV+KRQVS EEGE+K++ELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS+
Sbjct: 121 LVGNKTDLVDKRQVSTEEGESKAKELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSA 180
Query: 179 TKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
K E+MVDVNL+ T+ ++ Q SGC+C
Sbjct: 181 -KSEDMVDVNLKPTSSQSNSQQQAGSGCAC 209
>gi|388514011|gb|AFK45067.1| unknown [Lotus japonicus]
Length = 210
Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 176/189 (93%), Positives = 184/189 (97%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYD+ASRQ+FLNTSKWI+EV +ERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDIASRQTFLNTSKWIEEVHSERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVS EE EAK+RELNVMFIE SAKAGFNIK LFRKIAAALPGMETLS+TK
Sbjct: 121 GNKTDLVEKRQVSTEEAEAKARELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSTTK 180
Query: 181 QEEMVDVNL 189
QE+MVDVNL
Sbjct: 181 QEDMVDVNL 189
>gi|388512653|gb|AFK44388.1| unknown [Medicago truncatula]
Length = 207
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/208 (84%), Positives = 193/208 (92%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGD+SVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDRSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Q WDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNT+KW++EVR ERGSDVIIVLV
Sbjct: 61 QPWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRQERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEG+AKS+E +MFIETSAKAGFNIKPLFRKIA+ALPGMETLSST
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSKEFGIMFIETSAKAGFNIKPLFRKIASALPGMETLSSTN 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+E+MVDVNL+ T ++S ++ Q GCSC
Sbjct: 181 KEDMVDVNLKPTV-HSSNTEQQGGGCSC 207
>gi|414590929|tpg|DAA41500.1| TPA: hypothetical protein ZEAMMB73_483526 [Zea mays]
Length = 209
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/210 (87%), Positives = 198/210 (94%), Gaps = 3/210 (1%)
Query: 1 MAP--VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV 58
MAP VSALAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTV
Sbjct: 1 MAPAVVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV 60
Query: 59 RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIV 118
RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSFLNTSKWIDEVRTERG DVIIV
Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSKWIDEVRTERGGDVIIV 120
Query: 119 LVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
LVGNKTDLV+KRQVS EEGE+K++ELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS+
Sbjct: 121 LVGNKTDLVDKRQVSTEEGESKAKELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSA 180
Query: 179 TKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
KQE+MVDVNL+ST+ ++ Q + SGC+C
Sbjct: 181 -KQEDMVDVNLKSTSSQSNSQQQEGSGCAC 209
>gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekinensis]
Length = 206
Score = 365 bits (936), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 177/208 (85%), Positives = 195/208 (93%), Gaps = 2/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA V+ LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMY+EDRT+RL
Sbjct: 1 MAAVTPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYMEDRTLRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNTSKWI++VRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ K+R+ V+FIETSAKAGFNIKPLFRKI+AALPGM+TL ST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDFGVIFIETSAKAGFNIKPLFRKISAALPGMDTL-STR 179
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
Q +MVDVNLRS+T NASQ + Q GCSC
Sbjct: 180 QGDMVDVNLRSST-NASQGEQQGGGCSC 206
>gi|15227173|ref|NP_179816.1| RAB GTPase-like protein H1D [Arabidopsis thaliana]
gi|75337262|sp|Q9SID8.1|RAH1D_ARATH RecName: Full=Ras-related protein RABH1d; Short=AtRABH1d
gi|4567198|gb|AAD23614.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|330252194|gb|AEC07288.1| RAB GTPase-like protein H1D [Arabidopsis thaliana]
Length = 207
Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/208 (85%), Positives = 188/208 (90%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVA+R SFLNTSKWI+EVR ER DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVEKRQVSIEEG++K RE VMFIETSAKAGFNIKPLFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
E+MVDVNL+ T+ N+SQ Q CSC
Sbjct: 181 NEDMVDVNLKPTS-NSSQGDQQGGACSC 207
>gi|302769738|ref|XP_002968288.1| rab family GTPase [Selaginella moellendorffii]
gi|302788640|ref|XP_002976089.1| rab family GTPase [Selaginella moellendorffii]
gi|300156365|gb|EFJ22994.1| rab family GTPase [Selaginella moellendorffii]
gi|300163932|gb|EFJ30542.1| rab family GTPase [Selaginella moellendorffii]
Length = 209
Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 174/207 (84%), Positives = 193/207 (93%), Gaps = 3/207 (1%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 6 ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 65
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYDVA+RQSFLNT++W++EVRTERGSDVIIVLVG
Sbjct: 66 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTARWVEEVRTERGSDVIIVLVG 125
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLV+KRQVSIEEG+AK+RE VM+IETSAKAGFNIK LFRKIAAALPGME LSS KQ
Sbjct: 126 NKTDLVDKRQVSIEEGDAKAREFGVMYIETSAKAGFNIKALFRKIAAALPGMEALSSAKQ 185
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
E++VDV+L++ N S++++ GC+C
Sbjct: 186 EDLVDVSLKT---NPPPSETKAGGCAC 209
>gi|384247403|gb|EIE20890.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 212
Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/189 (89%), Positives = 184/189 (97%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 7 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 66
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSFLNT++WI+EVRTERGSDVI+VLVGNK
Sbjct: 67 DTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWIEEVRTERGSDVIVVLVGNK 126
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDLV+KRQVSIEEG+AK+RE NVMFIETSAKAGFNIK LFRKIAAALPGME+LS+ KQE+
Sbjct: 127 TDLVDKRQVSIEEGDAKAREFNVMFIETSAKAGFNIKALFRKIAAALPGMESLSAAKQED 186
Query: 184 MVDVNLRST 192
+VDVNL +T
Sbjct: 187 LVDVNLSAT 195
>gi|218199658|gb|EEC82085.1| hypothetical protein OsI_26083 [Oryza sativa Indica Group]
Length = 244
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/244 (76%), Positives = 200/244 (81%), Gaps = 36/244 (14%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKR------------------------------------QVSIEEGEAKSREL 144
GNKTDLV+K QVSIEEGE K+++L
Sbjct: 121 GNKTDLVDKSYYAMIEQYNNLAQNSLPYNFSWIKLKVCDSKQCHVMQVSIEEGEGKAKDL 180
Query: 145 NVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSS 204
VMFIETSAKAGFNIK LFRKIAAALPGMETLSS KQE+MVDVNL+S+ N+SQSQ+Q+
Sbjct: 181 GVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNANSSQSQAQAG 240
Query: 205 GCSC 208
GCSC
Sbjct: 241 GCSC 244
>gi|222637080|gb|EEE67212.1| hypothetical protein OsJ_24329 [Oryza sativa Japonica Group]
Length = 244
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/244 (76%), Positives = 200/244 (81%), Gaps = 36/244 (14%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+V+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKR------------------------------------QVSIEEGEAKSREL 144
GNKTDLV+K QVSIEEGE K+++L
Sbjct: 121 GNKTDLVDKSYYAMIEQYDNLAQNSLPYNFSWIKLKVCDSKQCHVMQVSIEEGEGKAKDL 180
Query: 145 NVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSS 204
VMFIETSAKAGFNIK LFRKIAAALPGMETLSS KQE+MVDVNL+S+ N+SQSQ+Q+
Sbjct: 181 GVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNANSSQSQAQAG 240
Query: 205 GCSC 208
GCSC
Sbjct: 241 GCSC 244
>gi|168066679|ref|XP_001785261.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162663131|gb|EDQ49913.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/205 (82%), Positives = 191/205 (93%), Gaps = 3/205 (1%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 12 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 71
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSFLNT++W++EVRTERGSDVII+LVGNK
Sbjct: 72 DTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWVEEVRTERGSDVIIMLVGNK 131
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDLV+KRQVSIEEG+AK++E VMFIETS+KAGFNIK LFRKIAAALPGME LSS K ++
Sbjct: 132 TDLVDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAALPGMEALSSHK-DD 190
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+VDVNL+ TT Q++ ++ GC+C
Sbjct: 191 LVDVNLKPTTN--PQAEGKAGGCAC 213
>gi|168062328|ref|XP_001783133.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665383|gb|EDQ52070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 209
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/205 (82%), Positives = 193/205 (94%), Gaps = 3/205 (1%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQSVGKTS+ITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 8 VSPLAKYKLVFLGDQSVGKTSVITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSFLNT++W++EVRTERGSDVII+LVGNK
Sbjct: 68 DTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWVEEVRTERGSDVIIMLVGNK 127
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL++KRQVSIEEG+AK++E VMFIETS+KAGFNIK LFRKIAAALPGME LSS+K ++
Sbjct: 128 TDLLDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAALPGMEALSSSK-DD 186
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+VDVNL+ST+ +Q+ S++ CSC
Sbjct: 187 LVDVNLKSTSN--AQADSKAGACSC 209
>gi|357113652|ref|XP_003558615.1| PREDICTED: ras-related protein RABH1b-like [Brachypodium
distachyon]
Length = 215
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/215 (78%), Positives = 192/215 (89%), Gaps = 7/215 (3%)
Query: 1 MAPV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
MAPV SALAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+R
Sbjct: 1 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTIR 60
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTER-GSDVIIV 118
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYDV RQSFL+TS WIDEV+TER G+DV+IV
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLHTSTWIDEVKTERAGTDVLIV 120
Query: 119 LVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
LVGNKTDLV+KRQV +EGEAK++E VMFIETSAKAGFN+KPLFRKIA +LPGM+ LSS
Sbjct: 121 LVGNKTDLVDKRQVPTDEGEAKAQEHGVMFIETSAKAGFNVKPLFRKIATSLPGMDALSS 180
Query: 179 TKQEEMVDVNLRSTTGN-----ASQSQSQSSGCSC 208
KQE+MVD+NLR +G+ A+Q + ++ GCSC
Sbjct: 181 AKQEDMVDINLRPASGSKAPGAAAQQEQKAGGCSC 215
>gi|168061935|ref|XP_001782940.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162665558|gb|EDQ52238.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 172/207 (83%), Positives = 191/207 (92%), Gaps = 3/207 (1%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 10 ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 69
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSFLNTS+WI+EV TERGSDVII+LVG
Sbjct: 70 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSRWIEEVLTERGSDVIIMLVG 129
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLV+KRQVSIEEG+AK++E+ VMFIETS+KAGFNIK LFRKIAAALPGME LSS K
Sbjct: 130 NKTDLVDKRQVSIEEGDAKAKEVGVMFIETSSKAGFNIKALFRKIAAALPGMEALSSHK- 188
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+++VDVNL+ TT Q + ++ GC+C
Sbjct: 189 DDLVDVNLKPTTN--PQGEGKAGGCAC 213
>gi|168014471|ref|XP_001759775.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162688905|gb|EDQ75279.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 211
Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 169/207 (81%), Positives = 192/207 (92%), Gaps = 3/207 (1%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 8 ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 67
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYDV++RQSF+NT++W++EVRTERGSDVII+LVG
Sbjct: 68 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFMNTARWVEEVRTERGSDVIIMLVG 127
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLV+KRQVSIEEG+AK++E VMFIETS+KAGFNIK LFRKIAAALPGMET+SS K
Sbjct: 128 NKTDLVDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAALPGMETMSSHK- 186
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+++VDVNL+ T +Q++ + GC+C
Sbjct: 187 DDLVDVNLKPTLN--TQTEGKPGGCAC 211
>gi|72255617|gb|AAZ66935.1| 117M18_16 [Brassica rapa]
Length = 216
Score = 352 bits (902), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 173/217 (79%), Positives = 196/217 (90%), Gaps = 10/217 (4%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA V+ LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAAVTPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTLRL 60
Query: 61 QL--W-------DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTER 111
QL W DTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNTSKW+++VRTER
Sbjct: 61 QLCLWCLICAFQDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWVEDVRTER 120
Query: 112 GSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
G+DVIIVLVGNKTDLV+KRQVSIEEG+ K+R+ V+FIETSAKAGFNIKPLFRKI+AALP
Sbjct: 121 GNDVIIVLVGNKTDLVDKRQVSIEEGDNKARDFGVIFIETSAKAGFNIKPLFRKISAALP 180
Query: 172 GMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
GM+TLSS KQ +MVDVNL+S+ ++SQ++ QS GCSC
Sbjct: 181 GMDTLSSAKQGDMVDVNLKSSN-HSSQAEQQSGGCSC 216
>gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa
Japonica Group]
Length = 215
Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 169/215 (78%), Positives = 189/215 (87%), Gaps = 7/215 (3%)
Query: 1 MAPV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
MAPV SALAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVR
Sbjct: 1 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVR 60
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYDV RQSFL+ SKWI+EV T+RG DVIIVL
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLSISKWIEEVNTQRGGDVIIVL 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDLV+KRQ+S +EGEAK++E MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS
Sbjct: 121 VGNKTDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSA 180
Query: 180 KQEEMVDVNLRST------TGNASQSQSQSSGCSC 208
KQE+MVD+NLR +G +Q + ++ GCSC
Sbjct: 181 KQEDMVDINLRPAASGQIPSGAEAQEEQKAGGCSC 215
>gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa
Japonica Group]
Length = 215
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/215 (78%), Positives = 189/215 (87%), Gaps = 7/215 (3%)
Query: 1 MAPV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
MAPV SALAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVR
Sbjct: 1 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVR 60
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYDV +QSFL+ SKWI+EV T+RG DVIIVL
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTGKQSFLSISKWIEEVNTQRGGDVIIVL 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDLV+KRQ+S +EGEAK++E MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS
Sbjct: 121 VGNKTDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSA 180
Query: 180 KQEEMVDVNLRST------TGNASQSQSQSSGCSC 208
KQE+MVD+NLR +G +Q + ++ GCSC
Sbjct: 181 KQEDMVDINLRPAASGQIPSGAEAQEEQKAGGCSC 215
>gi|307104270|gb|EFN52525.1| GTP binding protein [Chlorella variabilis]
Length = 211
Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 166/186 (89%), Positives = 176/186 (94%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 6 VQPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 65
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVVVYDV SRQSFLN +W++EVR ERGSDVIIVLVGNK
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAVVVYDVTSRQSFLNIQRWVEEVRAERGSDVIIVLVGNK 125
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDLV+KRQVSIEEG+AK+RELNVMFIETSAKAGFNIK LFRKIAAALPGME L+S KQE+
Sbjct: 126 TDLVDKRQVSIEEGDAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMEALNSAKQED 185
Query: 184 MVDVNL 189
+VD+NL
Sbjct: 186 LVDINL 191
>gi|168002794|ref|XP_001754098.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162694652|gb|EDQ80999.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 211
Score = 345 bits (884), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 164/205 (80%), Positives = 191/205 (93%), Gaps = 3/205 (1%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDN+YQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 10 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQLW 69
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAV+VYDV++RQSFLNT++W++EVRTERG+DVI++LVGNK
Sbjct: 70 DTAGQERFRSLIPSYIRDSSVAVIVYDVSNRQSFLNTARWVEEVRTERGNDVIVMLVGNK 129
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDLV+KRQVSIEEG+AK++EL VMFIETS+KAGFNIK LFRKIA ALPGME LSS K ++
Sbjct: 130 TDLVDKRQVSIEEGDAKAKELQVMFIETSSKAGFNIKALFRKIAVALPGMEALSSHK-DD 188
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+VDVNL+ T+ + ++++ GC+C
Sbjct: 189 LVDVNLKPTSN--ALAEAKEGGCAC 211
>gi|326503002|dbj|BAJ99126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 298
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/214 (76%), Positives = 185/214 (86%), Gaps = 6/214 (2%)
Query: 1 MAPV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
MAPV SALAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVR
Sbjct: 85 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVR 144
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYDV QSFL+TSKWIDEV T RG DV+IVL
Sbjct: 145 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDTQSFLHTSKWIDEVNTARGKDVLIVL 204
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDLV++RQV +EGEAK++E +F+ETSAKAGFNIK LFR IAA+LPGM+ +SS
Sbjct: 205 VGNKTDLVDQRQVPTDEGEAKAKEHGALFMETSAKAGFNIKALFRTIAASLPGMDAVSSA 264
Query: 180 KQEEMVDVNLRST-----TGNASQSQSQSSGCSC 208
KQE+MVD+NLR +G A Q + ++ GCSC
Sbjct: 265 KQEDMVDINLRPASGPAGSGTAGQQEEKAGGCSC 298
>gi|297734673|emb|CBI16724.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 163/179 (91%), Positives = 173/179 (96%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
DVASRQSFLNT+KWI+EVRTERGSDVIIVLVGNKTDLV+KRQVSIEEGEAK+R+LNVMFI
Sbjct: 61 DVASRQSFLNTAKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGEAKARDLNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAGFNIK LFRKIAAALPGMETLSS KQE+MVDVNL+S+ NASQSQ Q+ GCSC
Sbjct: 121 ETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNTNASQSQPQAGGCSC 179
>gi|326518973|dbj|BAJ92647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/214 (76%), Positives = 185/214 (86%), Gaps = 6/214 (2%)
Query: 1 MAPV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
MAPV SALAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVR
Sbjct: 61 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVR 120
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYDV QSFL+TSKWIDEV T RG DV+IVL
Sbjct: 121 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDTQSFLHTSKWIDEVNTARGKDVLIVL 180
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDLV++RQV +EGEAK++E +F+ETSAKAGFNIK LFR IAA+LPGM+ +SS
Sbjct: 181 VGNKTDLVDQRQVPTDEGEAKAKEHGALFMETSAKAGFNIKALFRTIAASLPGMDAVSSA 240
Query: 180 KQEEMVDVNLRST-----TGNASQSQSQSSGCSC 208
KQE+MVD+NLR +G A Q + ++ GCSC
Sbjct: 241 KQEDMVDINLRPASGPAGSGTAGQQEEKAGGCSC 274
>gi|388519757|gb|AFK47940.1| unknown [Lotus japonicus]
Length = 191
Score = 342 bits (876), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/192 (86%), Positives = 179/192 (93%), Gaps = 1/192 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+RQSFLNT+KW++EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+AKSRE +MFIETSAKAGFNIKPLFRKIAAALPG + +
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGWKHF-LLQ 179
Query: 181 QEEMVDVNLRST 192
E+MVDVNL+ T
Sbjct: 180 TEDMVDVNLKPT 191
>gi|302833886|ref|XP_002948506.1| RabH/Rab6 [Volvox carteri f. nagariensis]
gi|300266193|gb|EFJ50381.1| RabH/Rab6 [Volvox carteri f. nagariensis]
Length = 211
Score = 342 bits (876), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 167/208 (80%), Positives = 186/208 (89%), Gaps = 2/208 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP S LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 5 AP-SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYD+ +RQSFLNT++WI EVRTERG+DVII LVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTARWIQEVRTERGNDVIIFLVG 123
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL++KRQVSIEEG+AK+RELNV FIETSAKAG NIK LFRKIAAALPGME+++ KQ
Sbjct: 124 NKTDLIDKRQVSIEEGDAKARELNVNFIETSAKAGLNIKALFRKIAAALPGMESVTQNKQ 183
Query: 182 EEMVDVNLRSTTGNA-SQSQSQSSGCSC 208
E+M +V L ++T ++ +S CSC
Sbjct: 184 EQMEEVKLTTSTVTLDAKPPPPASTCSC 211
>gi|226507380|ref|NP_001147620.1| LOC100281229 [Zea mays]
gi|195612600|gb|ACG28130.1| ras-related protein Rab-6A [Zea mays]
gi|414865275|tpg|DAA43832.1| TPA: hypothetical protein ZEAMMB73_661349 [Zea mays]
Length = 213
Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 165/213 (77%), Positives = 189/213 (88%), Gaps = 5/213 (2%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VSALAKYKLVFLG+Q+VGKT+IITRFMYDKFD+TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAVVSALAKYKLVFLGNQAVGKTAIITRFMYDKFDDTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV RQSFLNTSKWI+EV T+RG DV+I LV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLNTSKWIEEVNTQRGGDVLIFLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KR+VS +EGEAK++E MF+ETSAKAGFN+KPLFRKIA +LPG++ LSS K
Sbjct: 121 GNKTDLVDKRKVSTDEGEAKAQEHGAMFMETSAKAGFNVKPLFRKIAGSLPGLDALSSGK 180
Query: 181 QEEMVDVNLRS-----TTGNASQSQSQSSGCSC 208
QE+MVD+NLR +G A+Q + +S GCSC
Sbjct: 181 QEDMVDINLRPASGSSASGAAAQLEQKSGGCSC 213
>gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158284201|gb|EDP09951.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 211
Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 166/208 (79%), Positives = 184/208 (88%), Gaps = 1/208 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A S LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 4 ATTSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYD+ +RQSFLNT++WI EVRTERG+DVII LVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTARWIQEVRTERGNDVIIFLVG 123
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL++KRQVSIEEG+AK+RELNV FIETSAKAG NIK LFRKIAAALPGME+++ KQ
Sbjct: 124 NKTDLIDKRQVSIEEGDAKARELNVNFIETSAKAGLNIKALFRKIAAALPGMESVTQNKQ 183
Query: 182 EEMVDVNLRSTTGNA-SQSQSQSSGCSC 208
E+M +V L ++T S+ + CSC
Sbjct: 184 EQMEEVKLTTSTVTLDSKPPPPPATCSC 211
>gi|168057732|ref|XP_001780867.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162667723|gb|EDQ54346.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 210
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/206 (77%), Positives = 189/206 (91%), Gaps = 2/206 (0%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+S L+KYKLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 6 ISPLSKYKLVFLGDQSVGKTSIITRFMYDKFDQTYQPTIGIDFLSKTMYLEDRTVRLQLW 65
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAV+VYDV++RQSF+NT++W++EVR ERG DV++VLVGNK
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAVIVYDVSNRQSFVNTARWVEEVRAERGKDVVLVLVGNK 125
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDLV+KRQVS+EEGE K+REL+ + IETSAKAGFNIK LFRKIA ALPGME+++ +KQ++
Sbjct: 126 TDLVDKRQVSVEEGETKARELSALMIETSAKAGFNIKSLFRKIAGALPGMESVNPSKQDD 185
Query: 184 MVDVNLRSTTGNASQSQSQSS-GCSC 208
VD+NL+ TT N +QS+ Q++ GC+C
Sbjct: 186 YVDINLK-TTSNNTQSEGQTAGGCAC 210
>gi|167998402|ref|XP_001751907.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697005|gb|EDQ83342.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/208 (78%), Positives = 185/208 (88%), Gaps = 8/208 (3%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
+A VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 5 IATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 64
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVVVYD SFLNT +W++EVRTERGSDVII+LV
Sbjct: 65 QLWDTAGQERFRSLIPSYIRDSSVAVVVYD-----SFLNTVRWVEEVRTERGSDVIIMLV 119
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVS+EEG+AK+ E VMFIETS+ AGFNIK LFRKIAAALPGME LSS K
Sbjct: 120 GNKTDLVDKRQVSVEEGDAKANEFGVMFIETSSNAGFNIKALFRKIAAALPGMEALSSHK 179
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+++VDV+L+ T+ Q++ ++ GC+C
Sbjct: 180 -DDLVDVSLKPTSN--PQTEGKAGGCAC 204
>gi|312283531|dbj|BAJ34631.1| unnamed protein product [Thellungiella halophila]
Length = 213
Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/213 (79%), Positives = 184/213 (86%), Gaps = 5/213 (2%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VSALAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAAVSALAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGS-DVIIVL 119
QLWDTAGQERFRSLIPSYIRDSSVA+VVYDVA+RQ+FLN SKWID+V ERGS DVIIVL
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVANRQTFLNISKWIDDVHRERGSGDVIIVL 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS- 178
VGNKTDLVEKRQVSI EGE K +E VMFIETSAK FNIK LFRKIAAALPGM++ SS
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEHGVMFIETSAKENFNIKALFRKIAAALPGMDSYSSA 180
Query: 179 TKQEEMVDVNLRSTTGNA---SQSQSQSSGCSC 208
TK E+MVDVNL++T+ ++ Q GCSC
Sbjct: 181 TKSEDMVDVNLKTTSNSSQGEQQGGGGGGGCSC 213
>gi|297798016|ref|XP_002866892.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312728|gb|EFH43151.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/214 (78%), Positives = 183/214 (85%), Gaps = 6/214 (2%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAAVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG-SDVIIVL 119
QLWDTAGQERFRSLIPSYIRDSSVA+VVYDV++RQ+FLNTSKWID+V ERG SDVIIVL
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIDDVHRERGQSDVIIVL 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-S 178
VGNKTDLVEKRQVSI EGE K +E VMFIETSAK FNIK LFRKIAAALPG++T S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDTYSLA 180
Query: 179 TKQEEMVDVNLRSTTGNA----SQSQSQSSGCSC 208
TK E+MVDVNL++T+ ++ GCSC
Sbjct: 181 TKSEDMVDVNLKTTSNSSQGEQQGGGGGGGGCSC 214
>gi|297742149|emb|CBI33936.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 328 bits (841), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 166/179 (92%), Positives = 176/179 (98%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
DVASRQSFLNTSKWI+EVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAK+RELNVMFI
Sbjct: 61 DVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAGFNIK LFRKIAAALPGMETLSS KQE+MVDVNL+S++G+ASQSQ+Q+ GCSC
Sbjct: 121 ETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSSGSASQSQTQARGCSC 179
>gi|255072909|ref|XP_002500129.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
gi|226515391|gb|ACO61387.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
Length = 204
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/211 (75%), Positives = 181/211 (85%), Gaps = 10/211 (4%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M+ V+ +AKYKLVFLGDQSVGKTSII+RFMYDKFDN+YQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MSTVTPMAKYKLVFLGDQSVGKTSIISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVVVYDV+SR SF NTS+WIDEVRTERGSDVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSSRSSFANTSRWIDEVRTERGSDVIVVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL +KR+VS+EEG+A++RE VMFIETSAKAGFN+K LFRKIAAALPGME ++
Sbjct: 121 GNKTDLTDKREVSVEEGDARAREAGVMFIETSAKAGFNVKALFRKIAAALPGMEAPAAPA 180
Query: 181 ---QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
++ +VDV L + AS C+C
Sbjct: 181 AKVEDRLVDVKLTAPAPPASS-------CAC 204
>gi|356540581|ref|XP_003538766.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 208
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/191 (85%), Positives = 173/191 (90%), Gaps = 4/191 (2%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDF-LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
GKTSIITRFMYDKFDNTYQATIGIDF LSKT+Y+EDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 20 CGKTSIITRFMYDKFDNTYQATIGIDFFLSKTLYVEDRTVRLQLWDTAGQERFRSLIPSY 79
Query: 79 IRDSSVA-VVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEG 137
IRDSSVA V+ YDVASRQ+FLNTS+WI+EVR ERGSD IIV VGNKTDLV KRQVS EEG
Sbjct: 80 IRDSSVAYVIAYDVASRQTFLNTSRWIEEVRIERGSDAIIVHVGNKTDLVNKRQVSTEEG 139
Query: 138 EAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNAS 197
EAKSRELNVMFIE SAKAGFNIK LFRKIAAALPGMETLSSTKQE+MVDV+LRS G
Sbjct: 140 EAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVDLRSFGG--Y 197
Query: 198 QSQSQSSGCSC 208
QSQ QS GC+C
Sbjct: 198 QSQPQSGGCAC 208
>gi|388496116|gb|AFK36124.1| unknown [Medicago truncatula]
Length = 180
Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 156/173 (90%), Positives = 165/173 (95%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGD+SVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDRSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Q WDTAGQERFRSLIPSYIRDSSVAV+VYDVA RQSFLNT+KW++EVR ERGSDVIIVLV
Sbjct: 61 QPWDTAGQERFRSLIPSYIRDSSVAVIVYDVAHRQSFLNTNKWVEEVRQERGSDVIIVLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
GNKTDLVEKRQVSIEEG+AKS+E +MFIETSAKAGFNIKPLFRKIA+ALPGM
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSKEFGIMFIETSAKAGFNIKPLFRKIASALPGM 173
>gi|15236081|ref|NP_195699.1| Ras-related protein RABH1C [Arabidopsis thaliana]
gi|75337423|sp|Q9SMR4.1|RAH1C_ARATH RecName: Full=Ras-related protein RABH1c; Short=AtRABH1c
gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|332661734|gb|AEE87134.1| Ras-related protein RABH1C [Arabidopsis thaliana]
Length = 214
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/214 (76%), Positives = 183/214 (85%), Gaps = 6/214 (2%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG-SDVIIVL 119
QLWDTAGQERFRSLIPSYIRDSSVA+VVYDV++RQ+FLNTSKWI++V ERG S+VIIVL
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-S 178
VGNKTDLVEKRQVSI EGE K +E VMFIETSAK FNIK LFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180
Query: 179 TKQEEMVDVNLRSTTGNA----SQSQSQSSGCSC 208
TK ++MVDVNL++T+ ++ GCSC
Sbjct: 181 TKSDDMVDVNLKTTSNSSQGEQQGGAGGGGGCSC 214
>gi|296084653|emb|CBI25776.3| unnamed protein product [Vitis vinifera]
Length = 178
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/179 (84%), Positives = 168/179 (93%), Gaps = 1/179 (0%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYDKFD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDKFDATYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
DV +RQSFLNTSKWI+EVRTERG+DVIIVLVGNKTDLV+KRQVSIEEG+ KSR+ VMFI
Sbjct: 61 DVGNRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVSIEEGDTKSRDFGVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAGFNIKPLFRKIA+ALPGMETLSSTKQE+MVDVNL+ + N+SQ++ Q GC+C
Sbjct: 121 ETSAKAGFNIKPLFRKIASALPGMETLSSTKQEDMVDVNLKPSV-NSSQTEQQGGGCAC 178
>gi|58331779|gb|AAW70387.1| At5g10260 [Arabidopsis thaliana]
gi|89111880|gb|ABD60712.1| At5g10260 [Arabidopsis thaliana]
Length = 178
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/179 (85%), Positives = 169/179 (94%), Gaps = 1/179 (0%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
DVA+RQSFLNTSKWI++VRTERGSDVIIVLVGNKTDLV+KRQVSIEEG+ K+R+ V+FI
Sbjct: 61 DVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNKARDYGVIFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE+MVDVNL+ T+ N++Q + Q GC+C
Sbjct: 121 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK-TSSNSAQGEQQRGGCAC 178
>gi|383848739|ref|XP_003700005.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Megachile
rotundata]
Length = 211
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 178/204 (87%), Gaps = 1/204 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNPNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+
Sbjct: 129 DLSDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDT 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ +S N S+S+ + SGC C
Sbjct: 189 VDLQNQSPMQNGSESEGE-SGCIC 211
>gi|340718724|ref|XP_003397813.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Bombus
terrestris]
gi|350409814|ref|XP_003488852.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Bombus
impatiens]
Length = 211
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 178/204 (87%), Gaps = 1/204 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+
Sbjct: 129 DLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDT 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ +S N S+S+ + SGC C
Sbjct: 189 VDLQNQSPMQNGSESEGE-SGCIC 211
>gi|387016274|gb|AFJ50256.1| GTP-binding protein [Crotalus adamanteus]
Length = 208
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 176/205 (85%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q+ S GCSC
Sbjct: 189 IDIKLEK-----PQEQAVSEGGCSC 208
>gi|303277025|ref|XP_003057806.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460463|gb|EEH57757.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/216 (73%), Positives = 180/216 (83%), Gaps = 15/216 (6%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A V+ +AKYKLVFLGDQSVGKTS+I+RFMYDKFDN+YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 4 AGVTPMAKYKLVFLGDQSVGKTSVISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYDV+SR SFLN ++WIDEVRTERGSDVIIVLVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSSRASFLNCARWIDEVRTERGSDVIIVLVG 123
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP---------G 172
NKTDLVE+R+VS+EEG+A++RE VMFIE SAKAGFN+K LFRKIAAALP G
Sbjct: 124 NKTDLVERREVSVEEGDARAREHGVMFIECSAKAGFNVKALFRKIAAALPGAEAGVGAGG 183
Query: 173 METLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ ++++VDV L SQ + S+G SC
Sbjct: 184 GAAARAKAEDQLVDVKL------TSQPVASSAGSSC 213
>gi|226531121|ref|NP_001141348.1| uncharacterized protein LOC100273439 [Zea mays]
gi|194704110|gb|ACF86139.1| unknown [Zea mays]
Length = 190
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/192 (81%), Positives = 171/192 (89%), Gaps = 4/192 (2%)
Query: 17 DQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 76
DQ G++ F + F N QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP
Sbjct: 3 DQKTGRSR---GFGFVSFRNQ-QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 58
Query: 77 SYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEE 136
SYIRDSSVAV+V+DVASRQSFLNTSKWI+EVRTERGSDVIIVLVGNKTDLV+KRQVSIEE
Sbjct: 59 SYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEE 118
Query: 137 GEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNA 196
GE K+++L VMFIETSAKAGFNIK LFRKIAAALPGMETLSS KQE+MVDVNLRS N+
Sbjct: 119 GEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLRSGNANS 178
Query: 197 SQSQSQSSGCSC 208
SQSQ+Q+ GCSC
Sbjct: 179 SQSQAQAGGCSC 190
>gi|83751822|gb|ABC42924.1| GTP-binding protein [Anas platyrhynchos]
Length = 208
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 175/205 (85%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|126327867|ref|XP_001363218.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Monodelphis
domestica]
Length = 208
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPQEPPVNEGGCSC 208
>gi|163915527|gb|AAI57380.1| Rab6a protein [Danio rerio]
Length = 208
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPPEQPVSEGGCSC 208
>gi|291384296|ref|XP_002708751.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 2
[Oryctolagus cuniculus]
gi|301759055|ref|XP_002915364.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Ailuropoda
melanoleuca]
gi|332211361|ref|XP_003254788.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Nomascus
leucogenys]
gi|426245107|ref|XP_004016355.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479823|tpg|DAA21938.1| TPA: RAB6A, member RAS oncogene family-like isoform 2 [Bos taurus]
gi|355566853|gb|EHH23232.1| hypothetical protein EGK_06662 [Macaca mulatta]
gi|355752448|gb|EHH56568.1| hypothetical protein EGM_06013 [Macaca fascicularis]
gi|380788413|gb|AFE66082.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
gi|380788417|gb|AFE66084.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
Length = 208
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 175/205 (85%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|38679888|ref|NP_942599.1| ras-related protein Rab-6A isoform b [Homo sapiens]
gi|197102660|ref|NP_001125644.1| ras-related protein Rab-6A [Pongo abelii]
gi|397487240|ref|XP_003814713.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Pan paniscus]
gi|131796|sp|P20340.3|RAB6A_HUMAN RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|75055038|sp|Q5RAV6.3|RAB6A_PONAB RecName: Full=Ras-related protein Rab-6A
gi|4585565|gb|AAD25535.1|AF130986_1 RAS-related protein RAB6 [Homo sapiens]
gi|20379054|gb|AAM21087.1|AF498939_1 small GTP binding protein RAB6A [Homo sapiens]
gi|550072|gb|AAA60246.1| GTP-binding protein [Homo sapiens]
gi|54696264|gb|AAV38504.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|55728729|emb|CAH91104.1| hypothetical protein [Pongo abelii]
gi|61356023|gb|AAX41200.1| RAB6A member RAS oncogene family [synthetic construct]
gi|66911837|gb|AAH96818.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|119595313|gb|EAW74907.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595314|gb|EAW74908.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595316|gb|EAW74910.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595318|gb|EAW74912.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260519|dbj|BAF82437.1| unnamed protein product [Homo sapiens]
gi|158261287|dbj|BAF82821.1| unnamed protein product [Homo sapiens]
gi|190692045|gb|ACE87797.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|254071271|gb|ACT64395.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|261860502|dbj|BAI46773.1| RAB6A, member RAS oncogene family [synthetic construct]
Length = 208
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 175/205 (85%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579169|gb|ABO97232.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 158/205 (77%), Positives = 178/205 (86%), Gaps = 5/205 (2%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A V+ L KYKLVFLGDQSVGKTSII+RFMYDKFDN+YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 6 AGVTPLPKYKLVFLGDQSVGKTSIISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQ 65
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV+SR SF+N++KWI EV+ ERG DVII LVG
Sbjct: 66 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVSSRASFVNSAKWISEVKAERGGDVIIALVG 125
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL + R+VS EGEAK++E VMFIETSAKAGFN+K LFRKIAAALPGMET S+
Sbjct: 126 NKTDL-DGREVSAAEGEAKAKEEGVMFIETSAKAGFNVKVLFRKIAAALPGMETPSTKAD 184
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGC 206
E++V+V L TG A QS ++SS C
Sbjct: 185 EDLVEVKL---TGQAQQS-AKSSCC 205
>gi|13195674|ref|NP_077249.1| ras-related protein Rab-6A isoform 2 [Mus musculus]
gi|13638404|sp|P35279.4|RAB6A_MOUSE RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|313104164|sp|Q9WVB1.2|RAB6A_RAT RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|7670415|dbj|BAA95059.1| unnamed protein product [Mus musculus]
gi|26341820|dbj|BAC34572.1| unnamed protein product [Mus musculus]
gi|26350389|dbj|BAC38834.1| unnamed protein product [Mus musculus]
gi|26350969|dbj|BAC39121.1| unnamed protein product [Mus musculus]
gi|74144412|dbj|BAE36058.1| unnamed protein product [Mus musculus]
gi|74146903|dbj|BAE41406.1| unnamed protein product [Mus musculus]
gi|74227574|dbj|BAE35649.1| unnamed protein product [Mus musculus]
gi|112292961|dbj|BAF02858.1| Rab6A [Mus musculus]
gi|148684515|gb|EDL16462.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148684520|gb|EDL16467.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068773|gb|EDM18325.1| rCG39700, isoform CRA_b [Rattus norvegicus]
gi|149068775|gb|EDM18327.1| rCG39700, isoform CRA_b [Rattus norvegicus]
Length = 208
Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPQEQPVNEGGCSC 208
>gi|281211020|gb|EFA85186.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 487
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/205 (73%), Positives = 179/205 (87%), Gaps = 1/205 (0%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+ +L+KYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 284 MESLSKYKLVFLGDQSVGKTSIITRFMYDSFDITYQATIGIDFLSKTMYLEDRTVRLQLW 343
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVA+VVYD+ ++ SFLNT KWID+VR+ERG++V+I+LVGNK
Sbjct: 344 DTAGQERFRSLIPSYIRDSSVAIVVYDITNKNSFLNTIKWIDDVRSERGNNVVIMLVGNK 403
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL +KRQVS+EEGEAK++E +MF ETSAKAGFNIK LFRK+A+ALPG++T S + E
Sbjct: 404 TDLADKRQVSMEEGEAKAKEYEIMFTETSAKAGFNIKALFRKVASALPGIDTNSLGQAPE 463
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
M +V L ST N + ++ Q+S C C
Sbjct: 464 MAEVILSSTDNNKTPAE-QASMCRC 487
>gi|359322436|ref|XP_003639844.1| PREDICTED: ras-related protein Rab-6A [Canis lupus familiaris]
Length = 208
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 175/205 (85%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|395814868|ref|XP_003780961.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Otolemur
garnettii]
Length = 208
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPQEPTVSEGGCSC 208
>gi|289741525|gb|ADD19510.1| Rab protein 6 [Glossina morsitans morsitans]
Length = 208
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/205 (73%), Positives = 178/205 (86%), Gaps = 5/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEE 183
DL +KRQVS EEGE K++ELNVMF+ETSAKAG+N+K LFR++AAALPGM++ + TK E+
Sbjct: 128 DLSDKRQVSTEEGERKAKELNVMFVETSAKAGYNVKQLFRRVAAALPGMDSTTETKPSED 187
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
M DV+L G ++++ GC+C
Sbjct: 188 MQDVHL----GVQNETKDPEGGCAC 208
>gi|348538713|ref|XP_003456835.1| PREDICTED: ras-related protein Rab-6A-like [Oreochromis niloticus]
Length = 208
Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM+T +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKLE----KPPEQPTSEGGCSC 208
>gi|291235598|ref|XP_002737729.1| PREDICTED: Rab-protein 6-like [Saccoglossus kowalevskii]
Length = 210
Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 175/205 (85%), Gaps = 4/205 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ-EE 183
DL +KRQVSI+EGE K++ELNVM IETSAK G+N+K LFR++AAALPGME+ K ++
Sbjct: 129 DLADKRQVSIDEGERKAKELNVMHIETSAKTGYNVKQLFRRVAAALPGMESQEQKKNDQD 188
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
M++V L+ T + Q Q GC+C
Sbjct: 189 MIEVKLKDT---PQEPQQQEGGCAC 210
>gi|213511394|ref|NP_001133408.1| RAB6A, member RAS oncogene family [Salmo salar]
gi|209153892|gb|ACI33178.1| Ras-related protein Rab-6A [Salmo salar]
Length = 208
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+IEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVAIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPPEQPISEGGCSC 208
>gi|114052691|ref|NP_001040270.1| ras small monomeric GTPase Rab6 [Bombyx mori]
gi|87248577|gb|ABD36341.1| ras small monomeric GTPase Rab6 [Bombyx mori]
Length = 209
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEG+ K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V LR + G+ ++ Q S C C
Sbjct: 189 HEVILRQSPGD---NKEQDSSCVC 209
>gi|403175392|ref|XP_003334220.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171582|gb|EFP89801.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 310
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/206 (73%), Positives = 177/206 (85%), Gaps = 8/206 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+AL K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 111 AALKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 170
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYDV +R SF+NTS+W+D+VR ERG+DVIIVLVGNKT
Sbjct: 171 TAGQERFRSLIPSYIRDSSVAVVVYDVTNRTSFINTSRWVDDVRAERGNDVIIVLVGNKT 230
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM--ETLSSTKQE 182
DL ++RQVS EE E KS+EL+VMFIETSAKAG N+K LF+KIA ALPGM E+ ++T
Sbjct: 231 DLGDRRQVSTEEAERKSKELDVMFIETSAKAGHNVKTLFKKIAQALPGMDSESQTTTPAN 290
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+ +DV++ TT + Q SGC+C
Sbjct: 291 QTIDVSVSPTTND------QQSGCAC 310
>gi|410915364|ref|XP_003971157.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Takifugu
rubripes]
Length = 208
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM+T +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKLE----KPPELPANEGGCSC 208
>gi|390362735|ref|XP_791590.3| PREDICTED: ras-related protein Rab-6A-like [Strongylocentrotus
purpuratus]
Length = 211
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/210 (73%), Positives = 178/210 (84%), Gaps = 13/210 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE-E 183
DL +KRQVSI+EGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ TK +
Sbjct: 129 DLADKRQVSIDEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESADQTKPAGD 188
Query: 184 MVDVNL-----RSTTGNASQSQSQSSGCSC 208
M++V+L + TTGN GC+C
Sbjct: 189 MIEVSLEKNQQQETTGN-------EGGCAC 211
>gi|157112176|ref|XP_001657425.1| rab6 [Aedes aegypti]
gi|108878120|gb|EAT42345.1| AAEL006091-PB [Aedes aegypti]
Length = 210
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 173/204 (84%), Gaps = 2/204 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDT 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD L++ N+ Q GC C
Sbjct: 189 VD--LQTQPSNSGDQQDSEGGCMC 210
>gi|343098455|ref|NP_001230202.1| ras-related protein Rab-6A [Sus scrofa]
Length = 208
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
VD+ L Q Q S GCSC
Sbjct: 189 VDIKLEK-----PQEQPVSEGGCSC 208
>gi|348513460|ref|XP_003444260.1| PREDICTED: ras-related protein Rab-6B-like [Oreochromis niloticus]
Length = 208
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 174/204 (85%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKL----DKPQEPPTNEGGCSC 208
>gi|113206062|ref|NP_001038105.1| ras-related protein Rab-6A [Gallus gallus]
gi|118573265|sp|Q1KME6.3|RAB6A_CHICK RecName: Full=Ras-related protein Rab-6A
gi|93209536|gb|ABF00126.1| GTP-binding protein [Gallus gallus]
Length = 208
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/205 (73%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|47222578|emb|CAG02943.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM+T +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPPELPPNEGGCSC 208
>gi|126327865|ref|XP_001363135.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Monodelphis
domestica]
Length = 208
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPQEPPVNEGGCSC 208
>gi|189233646|ref|XP_972453.2| PREDICTED: similar to rab6 [Tribolium castaneum]
Length = 324
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 175/204 (85%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 124 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 183
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 184 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 243
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 244 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 303
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T ++ + GC+C
Sbjct: 304 QEVVLKDT---PNEVKDPDGGCAC 324
>gi|19923231|ref|NP_002860.2| ras-related protein Rab-6A isoform a [Homo sapiens]
gi|397487242|ref|XP_003814714.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Pan paniscus]
gi|4680635|gb|AAD27707.1|AF130122_1 small GTP binding protein RAB6 isoform [Homo sapiens]
gi|6684463|gb|AAF23593.1|AF119836_1 GTP-binding protein RAB6C [Homo sapiens]
gi|8163754|gb|AAF73841.1|AF198616_1 Rab GTPase RAB6A' [Homo sapiens]
gi|20379058|gb|AAM21089.1|AF498941_1 small GTP binding protein RAB6C [Homo sapiens]
gi|13177664|gb|AAH03617.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|16552748|dbj|BAB71371.1| unnamed protein product [Homo sapiens]
gi|46249771|gb|AAH68486.1| RAB6A protein [Homo sapiens]
gi|119595315|gb|EAW74909.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119595317|gb|EAW74911.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 208
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/205 (73%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|300797426|ref|NP_001180044.1| ras-related protein Rab-6A [Bos taurus]
gi|386782131|ref|NP_001248232.1| ras-related protein Rab-6A [Macaca mulatta]
gi|291384294|ref|XP_002708750.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 1
[Oryctolagus cuniculus]
gi|301759053|ref|XP_002915363.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Ailuropoda
melanoleuca]
gi|332211363|ref|XP_003254789.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Nomascus
leucogenys]
gi|426245109|ref|XP_004016356.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479822|tpg|DAA21937.1| TPA: RAB6A, member RAS oncogene family-like isoform 1 [Bos taurus]
gi|380788415|gb|AFE66083.1| ras-related protein Rab-6A isoform a [Macaca mulatta]
Length = 208
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/205 (73%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|213972608|ref|NP_445818.1| ras-related protein Rab-6A [Rattus norvegicus]
gi|254750706|ref|NP_001157135.1| ras-related protein Rab-6A isoform 1 [Mus musculus]
gi|17512290|gb|AAH19118.1| Rab6 protein [Mus musculus]
gi|74150583|dbj|BAE32315.1| unnamed protein product [Mus musculus]
gi|148684517|gb|EDL16464.1| RAB6, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149068776|gb|EDM18328.1| rCG39700, isoform CRA_d [Rattus norvegicus]
Length = 208
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPQEQPVNEGGCSC 208
>gi|195443010|ref|XP_002069232.1| GK21078 [Drosophila willistoni]
gi|194165317|gb|EDW80218.1| GK21078 [Drosophila willistoni]
Length = 208
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 128 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ + ++S+ GC+C
Sbjct: 188 QEVVLKDS---PNESKDPEGGCAC 208
>gi|45361477|ref|NP_989315.1| RAB6A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|39794406|gb|AAH64230.1| RAB6A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 208
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVV+D+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVFDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESSQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPPEQPVSEGGCSC 208
>gi|395814866|ref|XP_003780960.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Otolemur
garnettii]
Length = 208
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPQEPTVSEGGCSC 208
>gi|62898834|dbj|BAD97271.1| RAB6A, member RAS oncogene family isoform a variant [Homo sapiens]
Length = 208
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSD+II+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDIIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|395335642|gb|AFN54651.1| Rab GTPase [Litopenaeus vannamei]
Length = 211
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 174/204 (85%), Gaps = 1/204 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDF SKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFXSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME + K+ +M
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEP-TDNKKVDM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V LR + A ++ GC+C
Sbjct: 188 TEVVLRDSENAAEIGRTADGGCAC 211
>gi|147903483|ref|NP_001080506.1| RAB6A, member RAS oncogene family [Xenopus laevis]
gi|28302338|gb|AAH46683.1| Rab6-prov protein [Xenopus laevis]
Length = 208
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESSQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPPEQPVSEGGCSC 208
>gi|158297778|ref|XP_001238010.2| AGAP011363-PA [Anopheles gambiae str. PEST]
gi|157014741|gb|EAU76291.2| AGAP011363-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ + ++++ GC+C
Sbjct: 189 HEVVLKDS---PNETKDPEGGCAC 209
>gi|237829989|ref|XP_002364292.1| RAB6 protein [Toxoplasma gondii ME49]
gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gondii]
gi|211961956|gb|EEA97151.1| RAB6 protein [Toxoplasma gondii ME49]
gi|221507160|gb|EEE32764.1| RAB6 protein, putative [Toxoplasma gondii VEG]
Length = 209
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/207 (71%), Positives = 175/207 (84%), Gaps = 1/207 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A V+ L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQATIGIDFLSKT+YLEDRTVRLQ
Sbjct: 4 ATVAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSS AVVVYD+ +R SFLNT+KWI++VR ERG+DVII LVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVG 123
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL ++RQVS EEG K++E ++MF+ETSAKAG+NIK LFRK+A+ALPG+ET +
Sbjct: 124 NKTDLADRRQVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLASALPGLETQQTASD 183
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+MVDV L +T + S++S CSC
Sbjct: 184 AQMVDVQLNATPQQQDLT-SKTSSCSC 209
>gi|157112172|ref|XP_001657423.1| rab6 [Aedes aegypti]
gi|157112174|ref|XP_001657424.1| rab6 [Aedes aegypti]
gi|108878119|gb|EAT42344.1| AAEL006091-PA [Aedes aegypti]
gi|403182767|gb|EJY57618.1| AAEL006091-PC [Aedes aegypti]
Length = 209
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ + ++++ GC+C
Sbjct: 189 QEVVLKDS---PNETKDPEGGCAC 209
>gi|17137220|ref|NP_477172.1| Rab6 [Drosophila melanogaster]
gi|125985285|ref|XP_001356406.1| GA19714 [Drosophila pseudoobscura pseudoobscura]
gi|194765981|ref|XP_001965103.1| GF23429 [Drosophila ananassae]
gi|194861334|ref|XP_001969761.1| GG10272 [Drosophila erecta]
gi|195035425|ref|XP_001989178.1| GH10191 [Drosophila grimshawi]
gi|195147148|ref|XP_002014542.1| GL18897 [Drosophila persimilis]
gi|195351007|ref|XP_002042028.1| GM26307 [Drosophila sechellia]
gi|195387894|ref|XP_002052627.1| GJ20647 [Drosophila virilis]
gi|195472321|ref|XP_002088449.1| GE12402 [Drosophila yakuba]
gi|2313037|dbj|BAA21707.1| rab6 [Drosophila melanogaster]
gi|7297923|gb|AAF53168.1| Rab6 [Drosophila melanogaster]
gi|16648070|gb|AAL25300.1| GH09086p [Drosophila melanogaster]
gi|54644730|gb|EAL33470.1| GA19714 [Drosophila pseudoobscura pseudoobscura]
gi|190617713|gb|EDV33237.1| GF23429 [Drosophila ananassae]
gi|190661628|gb|EDV58820.1| GG10272 [Drosophila erecta]
gi|193905178|gb|EDW04045.1| GH10191 [Drosophila grimshawi]
gi|194106495|gb|EDW28538.1| GL18897 [Drosophila persimilis]
gi|194123852|gb|EDW45895.1| GM26307 [Drosophila sechellia]
gi|194149084|gb|EDW64782.1| GJ20647 [Drosophila virilis]
gi|194174550|gb|EDW88161.1| GE12402 [Drosophila yakuba]
gi|220945102|gb|ACL85094.1| Rab6-PA [synthetic construct]
gi|220954838|gb|ACL89962.1| Rab6-PA [synthetic construct]
Length = 208
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 128 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ + ++++ GC+C
Sbjct: 188 QEVVLKDS---PNETKDPEGGCAC 208
>gi|270014377|gb|EFA10825.1| hypothetical protein TcasGA2_TC001600 [Tribolium castaneum]
Length = 209
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 175/204 (85%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T ++ + GC+C
Sbjct: 189 QEVVLKDT---PNEVKDPDGGCAC 209
>gi|327267235|ref|XP_003218408.1| PREDICTED: ras-related protein Rab-6B-like [Anolis carolinensis]
Length = 208
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++ELNVMFIETSAK G+N+K LFR++A+ALPGME++ +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVASALPGMESVQEKSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKL----DKPQEPPASEGGCSC 208
>gi|410972687|ref|XP_003992789.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Felis catus]
Length = 208
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 173/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG Q VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGVQDVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|61806504|ref|NP_001013485.1| ras-related protein Rab-6B [Danio rerio]
gi|60552244|gb|AAH91529.1| Zgc:112018 [Danio rerio]
Length = 208
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNINSFQLTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME+L +E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAALPGMESLDDNNKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + SGCSC
Sbjct: 189 IDIKL----DKQPDPPATESGCSC 208
>gi|47228262|emb|CAG07657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANSEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L ++ GCSC
Sbjct: 189 IDIKL----DKPAEPTVPEGGCSC 208
>gi|345571504|gb|EGX54318.1| hypothetical protein AOL_s00004g351 [Arthrobotrys oligospora ATCC
24927]
Length = 211
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/205 (72%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ +RQSFLNTSKW+D+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTSKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME-TLSSTKQEE 183
DL +KRQV+ EEGE K++E VMFIETSAKAG N+K LF++IA ALPGME L ++
Sbjct: 132 DLNDKRQVTTEEGEKKAKEFKVMFIETSAKAGHNVKTLFKRIAQALPGMEGPLGDDAGKQ 191
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
M+DVN++ TG+ + + C+C
Sbjct: 192 MIDVNIKPETGSTA-----NDNCAC 211
>gi|48096836|ref|XP_392533.1| PREDICTED: ras-related protein Rab-6A [Apis mellifera]
gi|380012436|ref|XP_003690289.1| PREDICTED: ras-related protein Rab-6A-like [Apis florea]
Length = 209
Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T + +S S C+C
Sbjct: 189 QEVVLKDT---PIELKSSESSCAC 209
>gi|410924265|ref|XP_003975602.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Takifugu
rubripes]
gi|225706442|gb|ACO09067.1| Ras-related protein Rab-6B [Osmerus mordax]
Length = 208
Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L ++ GCSC
Sbjct: 189 IDIKL----DKPAEPTVPEGGCSC 208
>gi|49456921|emb|CAG46781.1| RAB6A [Homo sapiens]
Length = 208
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+++K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYDVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|54696262|gb|AAV38503.1| RAB6A, member RAS oncogene family [synthetic construct]
Length = 209
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 174/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFL +QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLVEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTRDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKL-----EKPQEQPVSEGGCSC 208
>gi|241723781|ref|XP_002404303.1| RAS-related protein, putative [Ixodes scapularis]
gi|215505389|gb|EEC14883.1| RAS-related protein, putative [Ixodes scapularis]
gi|346471859|gb|AEO35774.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 176/204 (86%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERG+DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ EEGE K++ELNVMFIETSAK+G+N+K LFR++AAALPGME TK E++
Sbjct: 129 DLSDKRQVTTEEGERKAKELNVMFIETSAKSGYNVKQLFRRVAAALPGMENTERTK-EDI 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VDV+L+ +++ GC+C
Sbjct: 188 VDVDLKD---GPTETPRPEGGCAC 208
>gi|229367302|gb|ACQ58631.1| Ras-related protein Rab-6B [Anoplopoma fimbria]
Length = 208
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 174/204 (85%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMY EDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYSEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWI++VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVSSFQQTSKWIEDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + Q+ GCSC
Sbjct: 189 IDIKL----DKPQEPQTTEGGCSC 208
>gi|383848737|ref|XP_003700004.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 175/204 (85%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNPNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLSDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T S+ S C+C
Sbjct: 189 QEVVLKDTPIELKASE---SSCAC 209
>gi|345494735|ref|XP_001604718.2| PREDICTED: ras-related protein Rab-6A-like [Nasonia vitripennis]
Length = 209
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 175/204 (85%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T + S+ S C+C
Sbjct: 189 QEVVLKDTPIELNASE---SSCAC 209
>gi|209735274|gb|ACI68506.1| Ras-related protein Rab-6B [Salmo salar]
Length = 208
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 174/204 (85%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRT RGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTGRGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLGDKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ + + Q+ GCSC
Sbjct: 189 IDIKM----DKPQEPQTTEGGCSC 208
>gi|195114920|ref|XP_002002015.1| GI14260 [Drosophila mojavensis]
gi|193912590|gb|EDW11457.1| GI14260 [Drosophila mojavensis]
Length = 208
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K+++LNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 128 DLSDKRQVSTEEGERKAKDLNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ + ++++ GC+C
Sbjct: 188 QEVVLKDS---PNETKDPEGGCAC 208
>gi|51480434|gb|AAH80215.1| Rab6b protein [Danio rerio]
Length = 207
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G N+K LFR++AAALPGME++ T +E M
Sbjct: 128 DLADKRQITIEEGEQRAKELSVMFIETSAKTGCNVKQLFRRVAAALPGMESMQETSKEGM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 188 IDIKL----DKPQEPPTTEGGCSC 207
>gi|417397129|gb|JAA45598.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFSSLIPSYIRDSTAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 189 IDIKLE----KPQEQPVNEGGCSC 208
>gi|405963194|gb|EKC28791.1| Ras-related protein Rab-6B [Crassostrea gigas]
Length = 209
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 175/204 (85%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++ EEGE K++EL+VMFIETSAKAG+N+K LFR++AAALPGME + K+ EM
Sbjct: 129 DLSDKRQITTEEGERKAKELSVMFIETSAKAGYNVKQLFRRVAAALPGMEQ-TEPKKGEM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T + + + GCSC
Sbjct: 188 TEVKLKDT--GPIEPEHKEGGCSC 209
>gi|340718722|ref|XP_003397812.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Bombus
terrestris]
gi|350409818|ref|XP_003488853.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Bombus
impatiens]
Length = 209
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 175/204 (85%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T S+ S C+C
Sbjct: 189 QEVVLKDTPIELKASE---SSCAC 209
>gi|307189589|gb|EFN73950.1| Ras-related protein Rab-6A [Camponotus floridanus]
gi|307196069|gb|EFN77792.1| Ras-related protein Rab-6A [Harpegnathos saltator]
gi|332025967|gb|EGI66120.1| Ras-related protein Rab-6A [Acromyrmex echinatior]
Length = 209
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 174/204 (85%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ + E+M
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T S+ S C+C
Sbjct: 189 QEVVLKDTPIELKASE---SSCAC 209
>gi|409107174|pdb|4DKX|A Chain A, Crystal Structure Of The Rab 6a'(Q72l)
gi|409107175|pdb|4DKX|B Chain B, Crystal Structure Of The Rab 6a'(Q72l)
Length = 216
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 173/205 (84%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAG ERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGLERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
+D+ L Q Q S GCSC
Sbjct: 189 IDIKLEK-----PQEQPVSEGGCSC 208
>gi|239788471|dbj|BAH70915.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 210
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 171/204 (83%), Gaps = 2/204 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV E+GE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM+ + E+
Sbjct: 129 DLTDKRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDVAENRPPEDT 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD L++ N SQ S C C
Sbjct: 189 VD--LQNHAANQGDSQEFESSCMC 210
>gi|229367060|gb|ACQ58510.1| Ras-related protein Rab-6B [Anoplopoma fimbria]
Length = 208
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 174/204 (85%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRF+YD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFVYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWI++VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIEDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIET AK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETGAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + Q+ GCSC
Sbjct: 189 IDIKL----DKQQEPQTTEGGCSC 208
>gi|221487362|gb|EEE25594.1| RAB6 protein, putative [Toxoplasma gondii GT1]
Length = 234
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 174/205 (84%), Gaps = 1/205 (0%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V+ L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQATIGIDFLSKT+YLEDRTVRLQLW
Sbjct: 31 VAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQLW 90
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSS AVVVYD+ +R SFLNT+KWI++VR ERG+DVII LVGNK
Sbjct: 91 DTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVGNK 150
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL ++RQVS EEG K++E ++MF+ETSAKAG+NIK LFRK+A+ALPG+ET + +
Sbjct: 151 TDLADRRQVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLASALPGLETQQTASDAQ 210
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
MVDV L +T + S++S CSC
Sbjct: 211 MVDVQLNATPQQQDLT-SKTSSCSC 234
>gi|432853316|ref|XP_004067647.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGME++ +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESVQEPSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + Q+ CSC
Sbjct: 189 IDIKL----DKPQEPQTTEGSCSC 208
>gi|427787277|gb|JAA59090.1| Putative rab-protein 6 [Rhipicephalus pulchellus]
Length = 208
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 176/204 (86%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERG+DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ E+GE K++ELNVMFIETSAK+G+N+K LFR++AAALPGME TK E++
Sbjct: 129 DLSDKRQVTTEDGERKAKELNVMFIETSAKSGYNVKQLFRRVAAALPGMENTERTK-EDI 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VDV+L+ +++ GC+C
Sbjct: 188 VDVDLKD---GPTETPRPEGGCAC 208
>gi|348501270|ref|XP_003438193.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oreochromis
niloticus]
Length = 208
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 170/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L ++ GCSC
Sbjct: 189 IDIKL----DKPAEPAVPEGGCSC 208
>gi|357017139|gb|AET50598.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 172/208 (82%), Gaps = 1/208 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M + L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQATIGIDFLSKT+YLEDRTVRL
Sbjct: 1 MTDTAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSS AVVVYD+ +R SF+NT+KWI++V ERG DV+I LV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFINTTKWIEDVWAERGKDVVIALV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL ++RQVS EEGE K+RE ++FIETSAKAG N+K LFRK+AAALPG+ET S
Sbjct: 121 GNKTDLSDRRQVSPEEGEQKAREQGILFIETSAKAGHNVKTLFRKLAAALPGLETQQSAS 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+MVDV L +T S+ ++SGCSC
Sbjct: 181 DAQMVDVQLNATPQQQDLSR-KASGCSC 207
>gi|291399811|ref|XP_002716636.1| PREDICTED: RAB6B, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 208
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME++ +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMESVQEKSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKL----DKPQEPPASEGGCSC 208
>gi|432916105|ref|XP_004079294.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 170/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAALPGMESLDDANPEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L ++ GCSC
Sbjct: 189 IDIKL----DKPAEPTVPEGGCSC 208
>gi|326437703|gb|EGD83273.1| small GTP binding protein RAB6A [Salpingoeca sp. ATCC 50818]
Length = 207
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 170/205 (82%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S+L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 SSLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ +R SF TS+WID+VR ERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNRSSFQQTSRWIDDVRAERGQDVIIMLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEE 183
DL +KRQVSI+EGE +++ELNVMFIETSAKAG N+K LFR++A ALPGME + +E
Sbjct: 128 DLADKRQVSIDEGERRAKELNVMFIETSAKAGHNVKELFRRVAGALPGMEASAEKNLDQE 187
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+ DV L T Q GCSC
Sbjct: 188 LTDVKLTETP-----EQPPQEGCSC 207
>gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus]
Length = 212
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 175/204 (85%), Gaps = 2/204 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ + K+ +M
Sbjct: 127 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMES-TENKKVDM 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V LR + NA+ + G C
Sbjct: 186 TEVVLRDSE-NAADIGRTADGGMC 208
>gi|30424655|ref|NP_776142.1| ras-related protein Rab-6B [Mus musculus]
gi|96975097|ref|NP_057661.3| ras-related protein Rab-6B [Homo sapiens]
gi|155371985|ref|NP_001094599.1| ras-related protein Rab-6B [Bos taurus]
gi|386781658|ref|NP_001248165.1| ras-related protein Rab-6B [Macaca mulatta]
gi|126325809|ref|XP_001364646.1| PREDICTED: ras-related protein Rab-6B-like [Monodelphis domestica]
gi|296228059|ref|XP_002759647.1| PREDICTED: ras-related protein Rab-6B [Callithrix jacchus]
gi|297672009|ref|XP_002814108.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pongo abelii]
gi|301777392|ref|XP_002924114.1| PREDICTED: ras-related protein Rab-6B-like [Ailuropoda melanoleuca]
gi|311269411|ref|XP_003132476.1| PREDICTED: ras-related protein Rab-6B-like [Sus scrofa]
gi|348582027|ref|XP_003476778.1| PREDICTED: ras-related protein Rab-6B-like [Cavia porcellus]
gi|395519193|ref|XP_003763735.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Sarcophilus
harrisii]
gi|395832821|ref|XP_003789452.1| PREDICTED: ras-related protein Rab-6B [Otolemur garnettii]
gi|397503903|ref|XP_003822554.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pan paniscus]
gi|402861531|ref|XP_003895143.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Papio anubis]
gi|403265826|ref|XP_003925113.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Saimiri
boliviensis boliviensis]
gi|426218278|ref|XP_004003376.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Ovis aries]
gi|426342170|ref|XP_004036386.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Gorilla gorilla
gorilla]
gi|13633595|sp|Q9NRW1.1|RAB6B_HUMAN RecName: Full=Ras-related protein Rab-6B
gi|47117095|sp|P61294.1|RAB6B_MOUSE RecName: Full=Ras-related protein Rab-6B
gi|229891504|sp|A6QR46.1|RAB6B_BOVIN RecName: Full=Ras-related protein Rab-6B
gi|7385001|gb|AAF61637.1|AF166492_1 small GTPase RAB6B [Homo sapiens]
gi|20379056|gb|AAM21088.1|AF498940_1 small GTP binding protein RAB6B [Homo sapiens]
gi|12803379|gb|AAH02510.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|26331000|dbj|BAC29230.1| unnamed protein product [Mus musculus]
gi|30583365|gb|AAP35927.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|38148674|gb|AAH60618.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|60655043|gb|AAX32085.1| RAB6B [synthetic construct]
gi|112292963|dbj|BAF02859.1| Rab6B [Mus musculus]
gi|119599564|gb|EAW79158.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119599565|gb|EAW79159.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148689117|gb|EDL21064.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|151557109|gb|AAI50112.1| RAB6B protein [Bos taurus]
gi|168279011|dbj|BAG11385.1| Ras-related protein Rab-6B [synthetic construct]
gi|189065457|dbj|BAG35296.1| unnamed protein product [Homo sapiens]
gi|190690565|gb|ACE87057.1| RAB6B, member RAS oncogene family protein [synthetic construct]
gi|296490967|tpg|DAA33065.1| TPA: ras-related protein Rab-6B [Bos taurus]
gi|380783157|gb|AFE63454.1| ras-related protein Rab-6B [Macaca mulatta]
gi|383408451|gb|AFH27439.1| ras-related protein Rab-6B [Macaca mulatta]
gi|384943778|gb|AFI35494.1| ras-related protein Rab-6B [Macaca mulatta]
gi|410206664|gb|JAA00551.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410261278|gb|JAA18605.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410287730|gb|JAA22465.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410328335|gb|JAA33114.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|417397131|gb|JAA45599.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKL----DKPQEPPASEGGCSC 208
>gi|15238317|ref|NP_201304.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
gi|75335533|sp|Q9LV79.1|RAH1A_ARATH RecName: Full=Ras-related protein RABH1a; Short=AtRABH1a
gi|8843763|dbj|BAA97311.1| GTP binding protein-like [Arabidopsis thaliana]
gi|332010596|gb|AED97979.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
Length = 206
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/199 (75%), Positives = 168/199 (84%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YKLVFLGDQ VGKTSIIT FMY KFD +YQATIGIDFLSKT EDRT RLQLWDTAGQE
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQE 67
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RF+SL+PSYIRDSSVAV+VYDVAS+QSF+NTSKWI+EVR ERGS VIIVLVGNKTDLV K
Sbjct: 68 RFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNK 127
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
RQVSIEEGE K+RE +F+ETSAKAGFNIKPLF KI +AL G E +S TKQE++VDVNL
Sbjct: 128 RQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNL 187
Query: 190 RSTTGNASQSQSQSSGCSC 208
+ ++ + Q S CSC
Sbjct: 188 KPLMFSSQANHQQESNCSC 206
>gi|240848863|ref|NP_001155439.1| rab6-like [Acyrthosiphon pisum]
gi|239788473|dbj|BAH70916.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 209
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 173/204 (84%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV E+GE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM+ + E+M
Sbjct: 129 DLTDKRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDVAENRPPEDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T +A+ + C+C
Sbjct: 189 QEVVLKDTPNDAANPE---KSCAC 209
>gi|297797521|ref|XP_002866645.1| hypothetical protein ARALYDRAFT_496719 [Arabidopsis lyrata subsp.
lyrata]
gi|297312480|gb|EFH42904.1| hypothetical protein ARALYDRAFT_496719 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/199 (75%), Positives = 167/199 (83%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YKLVFLGDQ VGKTSIIT FMY KFD +YQATIGIDFLSKTM EDRT RLQLWDTAGQE
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTMRYEDRTFRLQLWDTAGQE 67
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RF+SL+PSYIRDSSVAV+VYDVAS+QSFLNTSKWI+EVR ERGS VIIVLVGNKTDLV K
Sbjct: 68 RFKSLVPSYIRDSSVAVIVYDVASKQSFLNTSKWIEEVRAERGSHVIIVLVGNKTDLVNK 127
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
RQVSIEEG+ K+RE +F+ETSAKAGFNIKPLF KI +AL G E +S TK E++VDVNL
Sbjct: 128 RQVSIEEGDNKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKPEDLVDVNL 187
Query: 190 RSTTGNASQSQSQSSGCSC 208
+ ++ Q S CSC
Sbjct: 188 KPLIISSQADHQQESNCSC 206
>gi|148227273|ref|NP_001090835.1| RAB6B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|110645498|gb|AAI18790.1| rab6b protein [Xenopus (Silurana) tropicalis]
Length = 208
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IE GE K++ELNVMFIETSAK G+N+K LFR++A+ALPGME ++ M
Sbjct: 129 DLADKRQITIEAGEQKAKELNVMFIETSAKTGYNVKQLFRRVASALPGMECSEEKSKDGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + Q +GCSC
Sbjct: 189 IDIKL----DKPQEPQVADAGCSC 208
>gi|148233560|ref|NP_001086132.1| RAB6B, member RAS oncogene family [Xenopus laevis]
gi|49257610|gb|AAH74238.1| MGC83971 protein [Xenopus laevis]
Length = 208
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE K+++LNVM+IETSAK G+N+K LFR++A+ALPGME ++ M
Sbjct: 129 DLADKRQITIEEGEQKAKDLNVMYIETSAKTGYNVKQLFRRVASALPGMECSEEKSKDGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + Q +GCSC
Sbjct: 189 IDIKL----DKPQEPQVADAGCSC 208
>gi|198430343|ref|XP_002121682.1| PREDICTED: similar to GTP-binding protein [Ciona intestinalis]
Length = 209
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 172/204 (84%), Gaps = 1/204 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAK G+N+K LFR++AAALPGME S K++ +
Sbjct: 127 DLSDKRQVSIEEGERKAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMEN-SPDKEKNV 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D + +QS S C C
Sbjct: 186 MDEVILDRKPQPEPTQSSESMCGC 209
>gi|348515487|ref|XP_003445271.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Oreochromis
niloticus]
gi|410913473|ref|XP_003970213.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Takifugu
rubripes]
Length = 211
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+E E K+RELNVM+IETSAKAG+N+K LFR++AAALPGM++ +E+M
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + S CSC
Sbjct: 192 IDIKLE----KQPEMTVTESSCSC 211
>gi|348515485|ref|XP_003445270.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Oreochromis
niloticus]
gi|410913475|ref|XP_003970214.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Takifugu
rubripes]
Length = 211
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+A+ SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+E E K+RELNVM+IETSAKAG+N+K LFR++AAALPGM++ +E+M
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + S CSC
Sbjct: 192 IDIKLE----KQPEMTVTESSCSC 211
>gi|393910638|gb|EJD75978.1| Ras-like protein [Loa loa]
Length = 207
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 171/204 (83%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR+IA ALPG+E K +M
Sbjct: 127 DLADKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIEADQRDKH-DM 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L + Q Q Q SGC C
Sbjct: 186 QEVKL--SDAPIRQVQMQESGCWC 207
>gi|328767797|gb|EGF77845.1| hypothetical protein BATDEDRAFT_20546 [Batrachochytrium
dendrobatidis JAM81]
Length = 203
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 174/204 (85%), Gaps = 8/204 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT RLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTTRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ +R SF+NTSKW+D+VR ERG+DVI+VLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNRNSFVNTSKWVDDVRAERGNDVIVVLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL ++RQVS +EGE K++E NVMFIETSAKAG+N+K LF+KIA ALPGMET + + +
Sbjct: 128 DLSDERQVSTDEGEKKAKEFNVMFIETSAKAGYNVKALFKKIAMALPGMETQGT--ENNV 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV + T ++S+ S C+C
Sbjct: 186 IDVKVNPT------AKSEGSSCAC 203
>gi|156717362|ref|NP_001096221.1| uncharacterized protein LOC100124772 [Xenopus (Silurana)
tropicalis]
gi|111309029|gb|AAI21384.1| LOC100124772 protein [Xenopus (Silurana) tropicalis]
Length = 210
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++ EEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGM++ +E+M
Sbjct: 131 DLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDM 190
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + SGCSC
Sbjct: 191 IDIKLE----KPPEQPVTESGCSC 210
>gi|213424141|pdb|3CWZ|A Chain A, Strucure Of Rab6(Gtp)-R6ip1 Complex
Length = 188
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 145/185 (78%), Positives = 167/185 (90%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 2 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAG ERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 62 TAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 121
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 122 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 181
Query: 185 VDVNL 189
+D+ L
Sbjct: 182 IDIKL 186
>gi|432877573|ref|XP_004073166.1| PREDICTED: ras-related protein Rab-6B-like isoform 3 [Oryzias
latipes]
Length = 211
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+A+ SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+E E K+RELNVM+IETSAKAG+N+K LFR++AAALPGM++ +E+M
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSAPEKSKEDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + S CSC
Sbjct: 192 IDIKLE----RQPEMTVTESSCSC 211
>gi|432877571|ref|XP_004073165.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 211
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+E E K+RELNVM+IETSAKAG+N+K LFR++AAALPGM++ +E+M
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSAPEKSKEDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + S CSC
Sbjct: 192 IDIKLE----RQPEMTVTESSCSC 211
>gi|348669592|gb|EGZ09414.1| hypothetical protein PHYSODRAFT_254677 [Phytophthora sojae]
Length = 202
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 170/205 (82%), Gaps = 3/205 (1%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ LAKYKLVFLGDQ VGKTS+ITRFMYD FDN YQATIGIDFLSKTMY+EDRTVRLQLW
Sbjct: 1 IAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVVVYD+ +R SFLNTSKWI++VRTERG DV+I+LVGNK
Sbjct: 61 DTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNK 120
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TD+ ++RQVSIEEG K++E NVMFIETSAKAG+NIK LFRK+A LPGME +
Sbjct: 121 TDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSN 180
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
++D+ L T ++ + C+C
Sbjct: 181 LIDIKL---TAAPPPKENTAEQCNC 202
>gi|313232635|emb|CBY19305.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 173/207 (83%), Gaps = 4/207 (1%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V L KYK+VFLG QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 8 VKPLRKYKVVFLGKQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAG ERFRSLIPSYIRDS+VAVVVYDVA+ SF TSKWID+VR ERG+DVII+LVGNK
Sbjct: 68 DTAGHERFRSLIPSYIRDSTVAVVVYDVANVNSFQQTSKWIDDVRAERGTDVIIMLVGNK 127
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL +KRQVS++EGE K+ EL VMFIETSAK G+N+K LFR++AAALPGME +E
Sbjct: 128 TDLSDKRQVSVDEGERKAAELKVMFIETSAKTGYNVKQLFRRVAAALPGMEV--KEDKEN 185
Query: 184 MVDVNLR--STTGNASQSQSQSSGCSC 208
+V+VNL+ + N+S + ++ GC C
Sbjct: 186 LVEVNLQKHQSQDNSSSAIKEAGGCQC 212
>gi|50927456|gb|AAH78662.1| RAB6B protein [Homo sapiens]
Length = 208
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+L GNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLAGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKL----DKPQEPPASEGGCSC 208
>gi|196002958|ref|XP_002111346.1| rab6 [Trichoplax adhaerens]
gi|190585245|gb|EDV25313.1| rab6 [Trichoplax adhaerens]
Length = 208
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 172/205 (83%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVV+D+ + SF TSKWID+VRTERG+DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVFDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQEE 183
DL +KRQVS EEGE K++ELNVMFIETSAKAG N+K LFR++AAALPGME+ S K+ +
Sbjct: 129 DLADKRQVSTEEGENKAKELNVMFIETSAKAGHNVKQLFRRVAAALPGMESAQDSGKRGD 188
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
VD+ T S+ GCSC
Sbjct: 189 QVDLQPHPTDDTPSE-----GGCSC 208
>gi|432877569|ref|XP_004073164.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 211
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++ EEGE +++ELNVMFIETSAK G+N+K LFR++AAALPGM++ +E+M
Sbjct: 132 DLADKRQITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSAPEKSKEDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + S CSC
Sbjct: 192 IDIKLE----RQPEMTVTESSCSC 211
>gi|167013419|pdb|3BBP|A Chain A, Rab6-Gtp:gcc185 Rab Binding Domain Complex
gi|167013420|pdb|3BBP|B Chain B, Rab6-Gtp:gcc185 Rab Binding Domain Complex
gi|167013421|pdb|3BBP|C Chain C, Rab6-Gtp:gcc185 Rab Binding Domain Complex
Length = 211
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 171/201 (85%), Gaps = 5/201 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAG ERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 132 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSG 205
+D+ L Q Q S G
Sbjct: 192 IDIKLEK-----PQEQPVSEG 207
>gi|318054582|ref|NP_001187853.1| ras-related protein Rab-6B [Ictalurus punctatus]
gi|308324148|gb|ADO29209.1| ras-related protein rab-6b [Ictalurus punctatus]
Length = 208
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 170/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYDV + SF TSKWI++VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDVTNVNSFQLTSKWIEDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQ+ +EEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME L +E M
Sbjct: 129 DLEEKRQILVEEGEQRAKELNVMFIETSAKTGTNVKQLFRRVAAALPGMENLDEMNKEGM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + S CSC
Sbjct: 189 IDIKL----DKVQEPPASESSCSC 208
>gi|321471489|gb|EFX82462.1| hypothetical protein DAPPUDRAFT_128059 [Daphnia pulex]
Length = 208
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K+RELNVMFIETSAKAG+N+K LFR++AAALPGME E++
Sbjct: 129 DLSDKRQVSTEEGERKARELNVMFIETSAKAGYNVKQLFRRVAAALPGMEA-DKKPPEDI 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+++L + + + GC+C
Sbjct: 188 TEIDLNNA---PVELKPAEGGCAC 208
>gi|391348759|ref|XP_003748610.1| PREDICTED: ras-related protein Rab-6A-like [Metaseiulus
occidentalis]
Length = 207
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 175/204 (85%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERG+DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGTDVIIMLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQVS E+GE K++EL VMFIETSAK+G+N+K LFR++A ALPGME +KQ ++
Sbjct: 128 DLSEKRQVSTEDGEKKAKELQVMFIETSAKSGYNVKQLFRRVANALPGMENTERSKQ-DI 186
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VDV+L+ G Q + + GC+C
Sbjct: 187 VDVDLKD--GPIEQPK-EDGGCAC 207
>gi|242005911|ref|XP_002423803.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507019|gb|EEB11065.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 209
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 173/204 (84%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEG K++ELNV FIETSAKAG+N+K LFR++AAALPGM++ + E+
Sbjct: 129 DLSDKRQVSSEEGVKKAKELNVKFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDR 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+V L+ T +Q Q+ GC+C
Sbjct: 189 QEVILKDT---PNQVQNPEGGCAC 209
>gi|298707324|emb|CBJ25951.1| Rab6, RAB family GTPase [Ectocarpus siliculosus]
Length = 217
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/206 (69%), Positives = 172/206 (83%), Gaps = 5/206 (2%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ LAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 16 IAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLW 75
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAV+VYD+ +R SFLNTSKWI++VR ERG+DV+++LVGNK
Sbjct: 76 DTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNK 135
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE- 182
TDL E+RQVS+EEGE +++ +MFIETSAK G+NIK LFRK+A ALPGMET +T
Sbjct: 136 TDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPATSNNA 195
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
++D+ L + A ++ + C+C
Sbjct: 196 NLIDIKLSA----APPTEDAARTCAC 217
>gi|77681452|ref|NP_001029351.1| ras-related protein Rab-6B [Danio rerio]
gi|71682167|gb|AAI00012.1| RAB6B, member RAS oncogene family [Danio rerio]
Length = 215
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 174/211 (82%), Gaps = 11/211 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV------ 58
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLGVSDLQ 68
Query: 59 -RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
RLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII
Sbjct: 69 ARLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGME++
Sbjct: 129 MLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQ 188
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
T +E M+D+ L + + GCSC
Sbjct: 189 ETSKEGMIDIKL----DKPQEPPTTEGGCSC 215
>gi|410915366|ref|XP_003971158.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Takifugu
rubripes]
Length = 208
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++ EEGE +++E++V+FIETSAKAG+N+K LFR++AAALPGM+T +E+M
Sbjct: 129 DLADKRQITTEEGEQRAKEMSVLFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 189 IDIKLE----KPPELPANEGGCSC 208
>gi|387018010|gb|AFJ51123.1| ras-related protein Rab-6A-like [Crotalus adamanteus]
Length = 212
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 13 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 72
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 73 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 132
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++ EEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGM+ +++M
Sbjct: 133 DLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDNAPEKSKDDM 192
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + +GCSC
Sbjct: 193 IDIKLE----KPPEQPVTENGCSC 212
>gi|320166564|gb|EFW43463.1| RAB6A [Capsaspora owczarzaki ATCC 30864]
Length = 223
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 174/203 (85%), Gaps = 1/203 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 21 NPMRKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 80
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ +R SF T+KWID+VR ERG+DVII+LVGNKT
Sbjct: 81 TAGQERFRSLIPSYIRDSSVAVVVYDITNRNSFQQTTKWIDDVRAERGNDVIIMLVGNKT 140
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME-TLSSTKQEE 183
DL +KRQVSIEEGEAKS+ELNVMFIETSAKAG+N+K LFR++AAALPGME + +++
Sbjct: 141 DLGDKRQVSIEEGEAKSKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEASPDKPNKDD 200
Query: 184 MVDVNLRSTTGNASQSQSQSSGC 206
+VDV L TT A+ C
Sbjct: 201 LVDVKLTETTPAAAAPAGMCGAC 223
>gi|66911325|gb|AAH97051.1| Zgc:63637 protein [Danio rerio]
Length = 211
Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 170/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+A+ SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+E E K+REL VM+IETSAKAG+N+K LFR++AAALPGM++ +E+M
Sbjct: 132 DLGDKRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + S CSC
Sbjct: 192 IDIKLE----KPPELPVTESSCSC 211
>gi|158254057|gb|AAI54222.1| Zgc:63637 [Danio rerio]
Length = 211
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 170/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+E E K+REL VM+IETSAKAG+N+K LFR++AAALPGM++ +E+M
Sbjct: 132 DLGDKRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + S CSC
Sbjct: 192 IDIKLE----KPPELPVTESSCSC 211
>gi|328849933|gb|EGF99105.1| hypothetical protein MELLADRAFT_40435 [Melampsora larici-populina
98AG31]
Length = 185
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/171 (84%), Positives = 159/171 (92%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 1 LKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 60
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAVVVYDVA+R SF+NTSKW+D+VR ERG+DVIIVLVGNKTDL
Sbjct: 61 GQERFRSLIPSYIRDSSVAVVVYDVANRTSFMNTSKWVDDVRAERGNDVIIVLVGNKTDL 120
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+KRQVS +E E KS+ELNVMFIETSAKAG N+K LF+KIA ALPGM+T S
Sbjct: 121 GDKRQVSSDEAEKKSKELNVMFIETSAKAGHNVKTLFKKIAQALPGMDTAS 171
>gi|449498485|ref|XP_004177271.1| PREDICTED: ras-related protein Rab-6A-like [Taeniopygia guttata]
Length = 211
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/200 (71%), Positives = 169/200 (84%), Gaps = 4/200 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 16 EFKLVSLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 75
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +
Sbjct: 76 ERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 135
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KRQ++ EEGE +++ELNVMFIETSAK G+N+K LFR++AAALPGM++ +E+M+D+
Sbjct: 136 KRQITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDMIDIK 195
Query: 189 LRSTTGNASQSQSQSSGCSC 208
L + SGCSC
Sbjct: 196 LE----KPPEQPVTESGCSC 211
>gi|47087033|ref|NP_998530.1| ras-related protein Rab-6A [Danio rerio]
gi|34784020|gb|AAH58059.1| Zgc:63637 [Danio rerio]
Length = 211
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 169/203 (83%), Gaps = 4/203 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 13 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 72
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTD
Sbjct: 73 AGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD 132
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L +KRQVS+E E K+REL VM+IETSAKAG+N+K LFR++AAALPGM++ +E+M+
Sbjct: 133 LGDKRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDMI 192
Query: 186 DVNLRSTTGNASQSQSQSSGCSC 208
D+ L + S CSC
Sbjct: 193 DIKLE----KPPELPVTESSCSC 211
>gi|325188888|emb|CCA23418.1| Rab6 family GTPase putative [Albugo laibachii Nc14]
Length = 248
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 172/205 (83%), Gaps = 3/205 (1%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L+KYK+VFLGDQ VGKTS+ITRFMYD FDN YQATIGIDFLSKTMY+EDRTVRLQLW
Sbjct: 47 ITPLSKYKIVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLW 106
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVVVYD+ +R SFLNT KWI++VRTERG DV+I+LVGNK
Sbjct: 107 DTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTIKWIEDVRTERGQDVVIMLVGNK 166
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TD+ ++RQV++EEG K+ + NV+FIE+SAKAG+NIKPLFRK+A LPGME ++
Sbjct: 167 TDISDRRQVTVEEGTEKATQENVLFIESSAKAGYNIKPLFRKLAVMLPGMENATNNGDAN 226
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
++D+ L T + ++ ++ C+C
Sbjct: 227 LIDIKL---TAAPAPKEATTNSCAC 248
>gi|339236385|ref|XP_003379747.1| GTP-binding protein Ryh1 [Trichinella spiralis]
gi|316977574|gb|EFV60659.1| GTP-binding protein Ryh1 [Trichinella spiralis]
Length = 207
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 173/205 (84%), Gaps = 5/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG ++K LFR++AAALPGM+ + +++
Sbjct: 127 DLSDKRQVSSEEGERKAKELNVMFIETSAKAGLHVKQLFRRVAAALPGMDETPTRPTQDV 186
Query: 185 VDVNLRSTTGNASQSQS-QSSGCSC 208
V R +T N +SQ Q GC C
Sbjct: 187 V----RISTQNDVKSQGLQDGGCWC 207
>gi|432898518|ref|XP_004076541.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 172/204 (84%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++ EEGE +++E+NV+FIETSAK G+N+K LFR++AAALPGM+T +E+M
Sbjct: 129 DLADKRQITTEEGEQRAKEMNVLFIETSAKTGYNVKQLFRRVAAALPGMDTSQDKSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L Q S+ S CSC
Sbjct: 189 IDIKLEKP---PEQPASEGS-CSC 208
>gi|313239407|emb|CBY14345.1| unnamed protein product [Oikopleura dioica]
Length = 210
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/205 (72%), Positives = 170/205 (82%), Gaps = 3/205 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYDV + SF T+KWID+VRTERG+DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDVTNINSFNQTNKWIDDVRTERGTDVIIVLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE- 183
DL +KRQVSI+EGE K++ELNVMFIETSAK G+N+K LFR++AAALPGME T +
Sbjct: 128 DLADKRQVSIDEGERKAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMEPKEQTSADSG 187
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
M D+ L+ ++ CSC
Sbjct: 188 MQDIRLKPLPN--PENPPGEGNCSC 210
>gi|351696990|gb|EHA99908.1| Ras-related protein Rab-6A [Heterocephalus glaber]
Length = 207
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 170/204 (83%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LF + AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFCR-AAALPGMESTQDRSREDM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 188 IDIKLE----KPQEQPVTEGGCSC 207
>gi|432853318|ref|XP_004067648.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 215
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 173/211 (81%), Gaps = 11/211 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT------- 57
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLSLSEPQ 68
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
VRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII
Sbjct: 69 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGME++
Sbjct: 129 MLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESVQ 188
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+E M+D+ L + Q+ CSC
Sbjct: 189 EPSKEGMIDIKL----DKPQEPQTTEGSCSC 215
>gi|432853320|ref|XP_004067649.1| PREDICTED: ras-related protein Rab-6B-like isoform 3 [Oryzias
latipes]
Length = 215
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 173/211 (81%), Gaps = 11/211 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR----- 59
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVR
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRIRSTA 68
Query: 60 --LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
LQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII
Sbjct: 69 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGME++
Sbjct: 129 MLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESVQ 188
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+E M+D+ L + Q+ CSC
Sbjct: 189 EPSKEGMIDIKL----DKPQEPQTTEGSCSC 215
>gi|327277372|ref|XP_003223439.1| PREDICTED: ras-related protein Rab-6A-like [Anolis carolinensis]
Length = 215
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 171/204 (83%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 16 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 75
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+V+D+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 76 TAGQERFRSLIPSYIRDSAAAVIVFDLTNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 135
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++ EEGE +++EL+VMFIETSAK G+N+K LFR++AAALPGM++ +++M
Sbjct: 136 DLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKDDM 195
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + SGCSC
Sbjct: 196 IDIKLE----KPPEQPVSESGCSC 215
>gi|410924267|ref|XP_003975603.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Takifugu
rubripes]
Length = 219
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 171/215 (79%), Gaps = 15/215 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV------ 58
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTV
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVGNLDFR 68
Query: 59 -----RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGS 113
RLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGS
Sbjct: 69 LSLQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGS 128
Query: 114 DVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DVII+LVGNKTDL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGM
Sbjct: 129 DVIIMLVGNKTDLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGM 188
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
E+L E M+D+ L ++ GCSC
Sbjct: 189 ESLDDANPEGMIDIKL----DKPAEPTVPEGGCSC 219
>gi|213410657|ref|XP_002176098.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
gi|212004145|gb|EEB09805.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
Length = 201
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 170/203 (83%), Gaps = 9/203 (4%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K+KLVFLG+QSVGKTS+ITRFMYD+FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 67
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDSSVA++VYD+ + SF+NT KWID+VR ER DVIIVLVGNKTD
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIDDVRAERSDDVIIVLVGNKTD 127
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L EKRQVS+EEGE K++EL +M +ETSAKAG+N+K LFR+IA LPGME + T+ +M+
Sbjct: 128 LAEKRQVSLEEGEQKAKELGIMHMETSAKAGYNVKQLFRRIAQMLPGMENV-DTQNTQMI 186
Query: 186 DVNLRSTTGNASQSQSQSSGCSC 208
DV++ Q + S C+C
Sbjct: 187 DVSI--------QPNTDESSCNC 201
>gi|449018630|dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [Cyanidioschyzon
merolae strain 10D]
Length = 211
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 171/188 (90%), Gaps = 1/188 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A +AL+KYKLVFLGDQ+VGKTSIITRFMYDKFDN YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 7 ATAAALSKYKLVFLGDQAVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQ 66
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYDV SR+SFLNT+KWI+EVR ERG++VIIVLVG
Sbjct: 67 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVTSRRSFLNTAKWIEEVRNERGNEVIIVLVG 126
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK+D +KRQVS+EEGEAK++EL+V+FIETSAK G N+K LFRKIAAALP + ++++
Sbjct: 127 NKSDQNDKRQVSVEEGEAKAKELDVLFIETSAKTGANVKALFRKIAAALP-GSSSTTSRG 185
Query: 182 EEMVDVNL 189
+++DV L
Sbjct: 186 SQLIDVKL 193
>gi|330792608|ref|XP_003284380.1| Rab GTPase [Dictyostelium purpureum]
gi|325085726|gb|EGC39128.1| Rab GTPase [Dictyostelium purpureum]
Length = 206
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 180/204 (88%), Gaps = 5/204 (2%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+ +L+KYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 1 MESLSKYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVA+VVYD+ ++ SFLNT KWI++VR ERG++V+I+LVGNK
Sbjct: 61 DTAGQERFRSLIPSYIRDSSVAIVVYDITNKNSFLNTIKWIEDVRNERGNNVVIMLVGNK 120
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QE 182
TDL +KRQVSIEEGEAK++E ++MF ETSAKAGFNIK LFRK+A+ALPG+++ S TK Q
Sbjct: 121 TDLADKRQVSIEEGEAKAQEYDIMFTETSAKAGFNIKALFRKVASALPGIDSNSMTKGQH 180
Query: 183 EMV-DVNLRSTTGNASQSQSQSSG 205
E++ +V++ T + QS + ++G
Sbjct: 181 EIISEVDISDT---SKQSAAANNG 201
>gi|440895300|gb|ELR47529.1| Ras-related protein Rab-6B [Bos grunniens mutus]
Length = 207
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 171/204 (83%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K FR++A+ALPGME + +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQ-FRRVASALPGMENVQEKSKEGM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + + GCSC
Sbjct: 188 IDIKL----DKPQEPPASEGGCSC 207
>gi|294951515|ref|XP_002787019.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239901609|gb|EER18815.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 203
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 169/204 (82%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD+ YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 3 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDSNYQATIGIDFLSKTMYLEDRTVRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ ++ SF+N KWID+VRTERG+DVII+LVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVAVVVYDITNKASFMNCEKWIDDVRTERGNDVIIMLVGNKT 122
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++E VMF E SAKAG+NIK LFRK+AAALP + +Q ++
Sbjct: 123 DLADKRQVSTEEGEQKAKEQGVMFTECSAKAGYNIKALFRKLAAALPQSNDQGAGQQGQI 182
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ L ++ S+ Q + C+C
Sbjct: 183 VDIQLNASN---SEPQEHAKKCAC 203
>gi|334188628|ref|NP_001190616.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
gi|332010597|gb|AED97980.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
Length = 213
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/206 (72%), Positives = 168/206 (81%), Gaps = 7/206 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW------ 63
YKLVFLGDQ VGKTSIIT FMY KFD +YQATIGIDFLSKT EDRT RLQLW
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSL 67
Query: 64 -DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
DTAGQERF+SL+PSYIRDSSVAV+VYDVAS+QSF+NTSKWI+EVR ERGS VIIVLVGN
Sbjct: 68 GDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGN 127
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLV KRQVSIEEGE K+RE +F+ETSAKAGFNIKPLF KI +AL G E +S TKQE
Sbjct: 128 KTDLVNKRQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQE 187
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
++VDVNL+ ++ + Q S CSC
Sbjct: 188 DLVDVNLKPLMFSSQANHQQESNCSC 213
>gi|399163145|gb|AFP33148.1| rab-6.1, partial [Caenorhabditis elegans]
Length = 204
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 169/202 (83%), Gaps = 3/202 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+AL K+KLVFLG+QSVGKTSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF T+KW+D+VR ERG DVIIVLVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS E+GE K+R+LNVMFIETSAKAG+N+K LFRKIA ALPG+ + +Q +
Sbjct: 126 DLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNI 185
Query: 185 VDVNLRSTTGNASQSQSQSSGC 206
V +N +A +SQ + C
Sbjct: 186 VIMN---PPKDAEESQGRQCPC 204
>gi|432916107|ref|XP_004079295.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 217
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 170/213 (79%), Gaps = 13/213 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV------ 58
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTV
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVGHECFC 68
Query: 59 ---RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDV 115
RLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T KWID+VRTERGSDV
Sbjct: 69 LQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDV 128
Query: 116 IIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
II+LVGNKTDL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME+
Sbjct: 129 IIMLVGNKTDLEEKRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAALPGMES 188
Query: 176 LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L E M+D+ L ++ GCSC
Sbjct: 189 LDDANPEGMIDIKL----DKPAEPTVPEGGCSC 217
>gi|17553774|ref|NP_498993.1| Protein RAB-6.1 [Caenorhabditis elegans]
gi|464527|sp|P34213.1|RAB6A_CAEEL RecName: Full=Ras-related protein Rab-6.1
gi|3877850|emb|CAA77590.1| Protein RAB-6.1 [Caenorhabditis elegans]
Length = 205
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 169/202 (83%), Gaps = 3/202 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+AL K+KLVFLG+QSVGKTSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 7 NALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF T+KW+D+VR ERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS E+GE K+R+LNVMFIETSAKAG+N+K LFRKIA ALPG+ + +Q +
Sbjct: 127 DLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNI 186
Query: 185 VDVNLRSTTGNASQSQSQSSGC 206
V +N +A +SQ + C
Sbjct: 187 VIMN---PPKDAEESQGRQCPC 205
>gi|428180040|gb|EKX48909.1| hypothetical protein GUITHDRAFT_151724 [Guillardia theta CCMP2712]
Length = 207
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 144/202 (71%), Positives = 166/202 (82%), Gaps = 4/202 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
LAKYKLVFLGDQSVGKTSIITRFMYDKFD+TYQATIGIDFLSKTMYL+DR VRLQLWDTA
Sbjct: 10 LAKYKLVFLGDQSVGKTSIITRFMYDKFDSTYQATIGIDFLSKTMYLDDRVVRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYDV +R+SF N KWIDEVR ERG DVI+ LVGNKTDL
Sbjct: 70 GQERFRSLIPSYIRDSSVAVIVYDVTNRESFDNAGKWIDEVRQERGEDVILALVGNKTDL 129
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
EKR+V+ EEGE K++ ++F+ETSAKAG N+K LFR++A LPG E + K E+V+
Sbjct: 130 AEKRRVTREEGEEKAKSFKILFVETSAKAGLNVKSLFRQLAQQLPGAENAAVKKDSELVE 189
Query: 187 VNLRSTTGNASQSQSQSSGCSC 208
V L + SQ ++ S CSC
Sbjct: 190 VKLDT----PSQQKNPSGACSC 207
>gi|225714626|gb|ACO13159.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
gi|290561885|gb|ADD38340.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
Length = 213
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/206 (72%), Positives = 170/206 (82%), Gaps = 3/206 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQV E+GE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ SS Q
Sbjct: 129 DLSEKRQVPTEDGERKAKELNVMFIETSAKAGYNVKLLFRRVAAALPGMDS-SSADQGAN 187
Query: 185 VDVNLRST--TGNASQSQSQSSGCSC 208
L++ Q+ SGC+C
Sbjct: 188 TTGGLKTVELIEKPIPEQTMESGCTC 213
>gi|169621732|ref|XP_001804276.1| hypothetical protein SNOG_14076 [Phaeosphaeria nodorum SN15]
gi|160704321|gb|EAT78701.2| hypothetical protein SNOG_14076 [Phaeosphaeria nodorum SN15]
Length = 205
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 172/204 (84%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ ++++F NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRGERGNDVIIVLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ N+MFIETSAK G N+K LF++IA ALPGME Q +M
Sbjct: 128 DLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQSQM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N SQ Q +SS CSC
Sbjct: 188 IDVNI-----NPSQPQQESS-CSC 205
>gi|296415924|ref|XP_002837633.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633511|emb|CAZ81824.1| unnamed protein product [Tuber melanosporum]
Length = 208
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 168/204 (82%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ +R SF NT+KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITNRTSFQNTTKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ EEGE K++E VMFIETSAKAG N+K LF++IA ALPGME + EM
Sbjct: 130 DLNDKRQVTTEEGEKKAKEFKVMFIETSAKAGHNVKTLFKRIAQALPGMEGTLNEPNSEM 189
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
++V++ + + S CSC
Sbjct: 190 INVDI-----DRNDSTQADGSCSC 208
>gi|209737742|gb|ACI69740.1| Ras-related protein Rab-6B [Salmo salar]
Length = 212
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 168/208 (80%), Gaps = 8/208 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR----L 60
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVR L
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRNSVRL 68
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T KWID+VRTERGSDVII+LV
Sbjct: 69 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNMNSFQQTCKWIDDVRTERGSDVIIMLV 128
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL EKRQ++IE GE +++ELNVMFIETSAK G N+K LFR++AA LPGME+L
Sbjct: 129 GNKTDLEEKRQITIEAGEQRAKELNVMFIETSAKTGTNVKQLFRRVAATLPGMESLDDVN 188
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
E M+D+ L ++ GCSC
Sbjct: 189 PEGMIDIKL----DKPAEPTVPEGGCSC 212
>gi|358060564|dbj|GAA93714.1| hypothetical protein E5Q_00360 [Mixia osmundae IAM 14324]
Length = 252
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 169/205 (82%), Gaps = 7/205 (3%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
AL K+KLVFLGDQ+ GKTS+IT+FMY FD TYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 53 ALKKFKLVFLGDQNAGKTSLITQFMYGSFDATYQATIGIDFLSKTMYLEDRTVRLQLWDT 112
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDSSVAVVVYD+ +R SF +T+KWID+VR ERGSDVIIVLVGNKTD
Sbjct: 113 AGQERFRSLIPSYIRDSSVAVVVYDITNRSSFASTNKWIDDVRAERGSDVIIVLVGNKTD 172
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS--STKQEE 183
L +KRQV+ EE E ++++L VMFIETSAKAG N+K LFRKIA ALPGM+ S + +
Sbjct: 173 LNDKRQVTTEEAEKRAKDLGVMFIETSAKAGHNVKTLFRKIAQALPGMDRDSEQAAGTNQ 232
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
M+DV T S + +SSGCSC
Sbjct: 233 MIDV-----TSKPSDAAPESSGCSC 252
>gi|357619652|gb|EHJ72138.1| ras small monomeric GTPase Rab6 [Danaus plexippus]
Length = 208
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/181 (77%), Positives = 163/181 (90%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS E+G+ K++ELNVMFIETSAKAG+N+K LFR++AAALPGM++ S E+
Sbjct: 129 DLSDKRQVSTEDGDRKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAESKPPEDS 188
Query: 185 V 185
+
Sbjct: 189 I 189
>gi|341900805|gb|EGT56740.1| CBN-RAB-6.1 protein [Caenorhabditis brenneri]
Length = 205
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/202 (71%), Positives = 169/202 (83%), Gaps = 3/202 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+AL K+KLVFLG+QSVGKTSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 7 NALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF T+KW+D+VR ERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS E+GE K+R+LNVMFIETSAKAG+N+K LFRKIA ALPG+ + +Q +
Sbjct: 127 DLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEEAPEQPNI 186
Query: 185 VDVNLRSTTGNASQSQSQSSGC 206
V +N +A +S+ + C
Sbjct: 187 VIMN---PPKDAEESEGRQCPC 205
>gi|66828353|ref|XP_647531.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897470|sp|Q55FK2.1|RAB6_DICDI RecName: Full=Ras-related protein Rab-6
gi|60475552|gb|EAL73487.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 171/204 (83%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+ +L+KYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 1 MESLSKYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVA+VVYD+ ++ SF NT KWI++VR ERG++V+I+LVGNK
Sbjct: 61 DTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVIMLVGNK 120
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL +KRQVSIEEGEAK++E ++MF ETSAKAGFNIK LFRK+A+ALPG+++ S TK +
Sbjct: 121 TDLADKRQVSIEEGEAKAKEYDIMFTETSAKAGFNIKALFRKVASALPGIDSNSMTKNQH 180
Query: 184 MVDVNLRSTTGNASQSQSQSSGCS 207
+ + T G + CS
Sbjct: 181 EIISEVDITDGGKPALKEGDGFCS 204
>gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces pombe 972h-]
gi|134131|sp|P17608.1|RYH1_SCHPO RecName: Full=GTP-binding protein ryh1
gi|5077|emb|CAA36715.1| ryh1 [Schizosaccharomyces pombe]
gi|2330800|emb|CAB11173.1| GTPase Ryh1 [Schizosaccharomyces pombe]
Length = 201
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 168/203 (82%), Gaps = 9/203 (4%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K+KLVFLG+QSVGKTS+ITRFMYD+FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 67
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDSSVA++VYD+ + SF+NT KWI++VR ERG DVIIVLVGNKTD
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTD 127
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L +KRQV+ EEGE K++EL +M +ETSAKAG N+K LFRKIA LPGME + T+ +M+
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENV-ETQSTQMI 186
Query: 186 DVNLRSTTGNASQSQSQSSGCSC 208
DV++ Q S C+C
Sbjct: 187 DVSI--------QPNENESSCNC 201
>gi|268574940|ref|XP_002642449.1| C. briggsae CBR-RAB-6.1 protein [Caenorhabditis briggsae]
Length = 205
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 167/204 (81%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+AL K+KLVFLG+QSVGKTSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 7 NALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF T+KW+D+VR ERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS E+GE K+R+LNVMFIETSAKAG+N+K LFRKIA ALPG+ + +Q +
Sbjct: 127 DLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNI 186
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
V +N + +Q C C
Sbjct: 187 VIMNPPKDS-----EDNQGRQCPC 205
>gi|339717366|pdb|2Y8E|A Chain A, Crystal Structure Of D. Melanogaster Rab6 Gtpase Bound To
Gmppnp
gi|339717367|pdb|2Y8E|B Chain B, Crystal Structure Of D. Melanogaster Rab6 Gtpase Bound To
Gmppnp
Length = 179
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/170 (82%), Positives = 158/170 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM+
Sbjct: 130 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMD 179
>gi|308471931|ref|XP_003098195.1| CRE-RAB-6.1 protein [Caenorhabditis remanei]
gi|308269346|gb|EFP13299.1| CRE-RAB-6.1 protein [Caenorhabditis remanei]
Length = 205
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 168/204 (82%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+AL K+KLVFLG+QSVGKTSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 7 NALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF T+KW+D+VR ERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS E+GE K+R+LNVMFIETSAKAG+N+K LFRKIA ALPG+ + +Q +
Sbjct: 127 DLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNI 186
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
V +N + +++ C C
Sbjct: 187 VIMNPPKDS-----EETEGRQCPC 205
>gi|388857378|emb|CCF49052.1| probable YPT6-GTP-binding protein of the rab family [Ustilago
hordei]
Length = 218
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 164/203 (80%), Gaps = 1/203 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 16 LRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAVVVYD+ +R SF NTSKW+D+VR ERG+DVIIVLVGNKTDL
Sbjct: 76 GQERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDL 135
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE-EMV 185
+KRQV+ +E E K++E NVMFIETSAKAG N+K LF+KIA ALPGM+ S
Sbjct: 136 SDKRQVTTDEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALPGMDKDSDVANAGPTA 195
Query: 186 DVNLRSTTGNASQSQSQSSGCSC 208
+ N+ T A + S C C
Sbjct: 196 NKNIDVTAPPAQTTMHDGSSCKC 218
>gi|324525564|gb|ADY48564.1| Ras-related protein Rab-6.2 [Ascaris suum]
Length = 207
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/181 (79%), Positives = 160/181 (88%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR+IA ALPG+E K +
Sbjct: 127 DLADKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIEPDQKDKHDNP 186
Query: 185 V 185
V
Sbjct: 187 V 187
>gi|189205773|ref|XP_001939221.1| GTP-binding protein ryh1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330935415|ref|XP_003304956.1| hypothetical protein PTT_17690 [Pyrenophora teres f. teres 0-1]
gi|187975314|gb|EDU41940.1| GTP-binding protein ryh1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311318146|gb|EFQ86893.1| hypothetical protein PTT_17690 [Pyrenophora teres f. teres 0-1]
Length = 204
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 170/204 (83%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ ++++F NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRGERGNDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ N+MFIETSAK G N+K LF++IA ALPGME Q +M
Sbjct: 127 DLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQSQM 186
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N SQ Q S CSC
Sbjct: 187 IDVNI-----NPSQP-PQDSSCSC 204
>gi|443689406|gb|ELT91802.1| hypothetical protein CAPTEDRAFT_169557 [Capitella teleta]
Length = 213
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 141/181 (77%), Positives = 162/181 (89%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLED+T+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDKTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF TSKWID+VRTERG+DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFQQTSKWIDDVRTERGTDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS EEGE K++EL VMFIETSAKAG+N+K LFR++AAALPGME +TK +
Sbjct: 129 DLSDKRQVSTEEGERKAKELGVMFIETSAKAGYNVKQLFRRVAAALPGMEQKEATKDDNN 188
Query: 185 V 185
+
Sbjct: 189 I 189
>gi|343427853|emb|CBQ71379.1| probable YPT6-GTP-binding protein of the rab family [Sporisorium
reilianum SRZ2]
Length = 218
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 163/203 (80%), Gaps = 1/203 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 16 LRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAVVVYD+ +R SF NTSKW+D+VR ERG+DVIIVLVGNKTDL
Sbjct: 76 GQERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDL 135
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
+KRQV+ EE E K++E NVMFIETSAKAG N+K LF+KIA ALPGM+ +
Sbjct: 136 SDKRQVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALPGMDKDADAANGGAAA 195
Query: 187 V-NLRSTTGNASQSQSQSSGCSC 208
N+ T A + S C C
Sbjct: 196 NKNIDVTAAPAQTTMEDGSSCKC 218
>gi|73535740|pdb|1YZQ|A Chain A, Gppnhp-Bound Rab6 Gtpase
Length = 170
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 140/169 (82%), Positives = 157/169 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 2 SPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 62 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 121
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGM
Sbjct: 122 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGM 170
>gi|451856251|gb|EMD69542.1| hypothetical protein COCSADRAFT_78453 [Cochliobolus sativus ND90Pr]
gi|452003327|gb|EMD95784.1| hypothetical protein COCHEDRAFT_1087944 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 171/204 (83%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ ++++F NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRGERGNDVIIVLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ N+MFIETSAK G N+K LF++IA ALPGME Q +M
Sbjct: 128 DLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQSQM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N SQ +Q + CSC
Sbjct: 188 IDVNI-----NPSQP-AQENSCSC 205
>gi|336367247|gb|EGN95592.1| hypothetical protein SERLA73DRAFT_186692 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379967|gb|EGO21121.1| hypothetical protein SERLADRAFT_475872 [Serpula lacrymans var.
lacrymans S7.9]
Length = 214
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/200 (72%), Positives = 169/200 (84%), Gaps = 4/200 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 19 RTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDSSVA+VV+D+ +RQSFL+TSKWID+VR+ERG+DVIIVLVGNK DL +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KRQV++EE AKS +LN+MF+ETSAKAG N+K LF+KIA +LPGME Q ++ +
Sbjct: 139 KRQVTLEEATAKSTQLNIMFMETSAKAGHNVKGLFKKIAMSLPGME---KEGQSDVQNAK 195
Query: 189 LRSTTGNASQSQSQSSGCSC 208
+ TT ASQ +S CSC
Sbjct: 196 IDVTTAEASQV-PDASQCSC 214
>gi|260796185|ref|XP_002593085.1| hypothetical protein BRAFLDRAFT_210049 [Branchiostoma floridae]
gi|229278309|gb|EEN49096.1| hypothetical protein BRAFLDRAFT_210049 [Branchiostoma floridae]
Length = 196
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/190 (74%), Positives = 165/190 (86%), Gaps = 4/190 (2%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 10 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 69
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQVS+E+GE
Sbjct: 70 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSLEDGER 129
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEEMVDVNLRSTTGNASQ 198
K++ELNVMFIETSAK G+N+K LFR++AAALPGME+ K +E+M++V L+ T +
Sbjct: 130 KAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMESSQDQKNKEDMIEVKLKDT---PQE 186
Query: 199 SQSQSSGCSC 208
QSQ GC+C
Sbjct: 187 PQSQEGGCAC 196
>gi|392572292|gb|EIW65444.1| hypothetical protein TREMEDRAFT_70574 [Tremella mesenterica DSM
1558]
Length = 216
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 169/204 (82%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 18 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 77
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ +R SFLNTSKW+D+VR ERG DVIIVLVGNKT
Sbjct: 78 TAGQERFRSLIPSYIRDSSVAVIVYDITNRTSFLNTSKWVDDVRNERGQDVIIVLVGNKT 137
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ EE + +++EL VM IETSAKAG N+K LF+KIA ALPG +
Sbjct: 138 DLNDKRQVTPEELDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGGAENKDAGGNQK 197
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV+ +TTG + Q+SGCSC
Sbjct: 198 IDVS--ATTG---EEPPQASGCSC 216
>gi|410915368|ref|XP_003971159.1| PREDICTED: ras-related protein Rab-6A-like isoform 3 [Takifugu
rubripes]
Length = 220
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 172/216 (79%), Gaps = 16/216 (7%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV------ 58
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTV
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVGAFVSA 68
Query: 59 ------RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG 112
RLQLWDTAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERG
Sbjct: 69 ATSLGIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG 128
Query: 113 SDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
SDVII+LVGNKTDL +KRQ++ EEGE +++E++V+FIETSAKAG+N+K LFR++AAALPG
Sbjct: 129 SDVIIMLVGNKTDLADKRQITTEEGEQRAKEMSVLFIETSAKAGYNVKQLFRRVAAALPG 188
Query: 173 METLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
M+T +E+M+D+ L + + GCSC
Sbjct: 189 MDTTQDKSREDMIDIKLE----KPPELPANEGGCSC 220
>gi|47225306|emb|CAG09806.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 161/179 (89%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL +KRQ++ EEGE +++ELNVMFIETSAK G+N+K LFR++AAALPGM++ +E+
Sbjct: 126 DLADKRQITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKED 184
>gi|444513620|gb|ELV10424.1| Ras-related protein Rab-6B [Tupaia chinensis]
Length = 357
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 160/178 (89%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K FR++A+ALPGME + +E
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQXFRRVASALPGMENVQEKSKE 186
>gi|440793018|gb|ELR14219.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 195
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 135/176 (76%), Positives = 162/176 (92%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA + LAKYKLVFLGDQSVGKTSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAGSNPLAKYKLVFLGDQSVGKTSIITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVA+VVYD+ +R +FL+T++W++++R ERG+DVI++LV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNRTTFLDTARWVEDIRAERGNDVILMLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
GNKTDL +KR VS EEGE+K++E MFIETSAKAG+N+KPLFR++AAALPG++ +
Sbjct: 121 GNKTDLADKRCVSAEEGESKAKEFGAMFIETSAKAGYNVKPLFRQVAAALPGIDPI 176
>gi|432898520|ref|XP_004076542.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Oryzias
latipes]
Length = 215
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 11/211 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT------- 57
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLTLSDGQ 68
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
+RLQLWDTAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII
Sbjct: 69 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL +KRQ++ EEGE +++E+NV+FIETSAK G+N+K LFR++AAALPGM+T
Sbjct: 129 MLVGNKTDLADKRQITTEEGEQRAKEMNVLFIETSAKTGYNVKQLFRRVAAALPGMDTSQ 188
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+E+M+D+ L Q S+ S CSC
Sbjct: 189 DKSREDMIDIKLEKP---PEQPASEGS-CSC 215
>gi|395517929|ref|XP_003763122.1| PREDICTED: ras-related protein Rab-6A-like [Sarcophilus harrisii]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/193 (73%), Positives = 161/193 (83%), Gaps = 4/193 (2%)
Query: 16 GDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
G VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI
Sbjct: 26 GKIKVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 85
Query: 76 PSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIE 135
PSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIE
Sbjct: 86 PSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIE 145
Query: 136 EGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGN 195
EGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L
Sbjct: 146 EGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLEK---- 201
Query: 196 ASQSQSQSSGCSC 208
+ GCSC
Sbjct: 202 PQEPPVNEGGCSC 214
>gi|344296650|ref|XP_003420019.1| PREDICTED: ras-related protein Rab-6B-like [Loxodonta africana]
Length = 192
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 161/178 (90%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKE 186
>gi|347838050|emb|CCD52622.1| similar to ras-related protein Rab-6A [Botryotinia fuckeliana]
Length = 207
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 169/205 (82%), Gaps = 8/205 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++R+SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNRKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQEE 183
DL +KR+V+ EGE ++++ N+MFIETSAK G N+K LFR+IA ALPGME ++ +
Sbjct: 130 DLNDKREVTTSEGEEEAKKNNLMFIETSAKLGHNVKTLFRRIAQALPGMEGADNAATPNQ 189
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
M+DVN+ T N GC+C
Sbjct: 190 MIDVNVNPTPAN-------QEGCAC 207
>gi|410045696|ref|XP_003313253.2| PREDICTED: ras-related protein Rab-6A [Pan troglodytes]
Length = 315
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/192 (73%), Positives = 163/192 (84%), Gaps = 6/192 (3%)
Query: 18 QSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 77
+SVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPS
Sbjct: 129 RSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPS 188
Query: 78 YIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEG 137
YIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEG
Sbjct: 189 YIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEG 248
Query: 138 EAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNAS 197
E K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L
Sbjct: 249 ERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKL-----EKP 303
Query: 198 QSQSQS-SGCSC 208
Q Q S GCSC
Sbjct: 304 QEQPVSEGGCSC 315
>gi|242818595|ref|XP_002487149.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713614|gb|EED13038.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 171/204 (83%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGME + + +M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEAQRGENQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N SQ + + GC+C
Sbjct: 192 IDVNI-----NPSQP-TNNDGCAC 209
>gi|296217099|ref|XP_002754841.1| PREDICTED: ras-related protein Rab-6A [Callithrix jacchus]
Length = 198
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 170/206 (82%), Gaps = 9/206 (4%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+ +L+K +F+ SVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLW
Sbjct: 1 MCSLSKSVFLFI---SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 57
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNK
Sbjct: 58 DTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNK 117
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+
Sbjct: 118 TDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSRED 177
Query: 184 MVDVNLRSTTGNASQSQSQS-SGCSC 208
M+D+ L Q Q S GCSC
Sbjct: 178 MIDIKL-----EKPQEQPVSEGGCSC 198
>gi|170087436|ref|XP_001874941.1| GTP binding protein [Laccaria bicolor S238N-H82]
gi|164650141|gb|EDR14382.1| GTP binding protein [Laccaria bicolor S238N-H82]
Length = 213
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 169/204 (82%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 15 SPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA+VV+D+ +RQSFL+T+KWID+VR+ERG+DVIIVLVGNK
Sbjct: 75 TAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKA 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV++EE AKS +LN+MF+ETSAKAG N+K LF+KIA +LPGME +
Sbjct: 135 DLSDKRQVTLEEATAKSTQLNIMFMETSAKAGHNVKSLFKKIAMSLPGMEKENQADPNTK 194
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV TT A + ++S CSC
Sbjct: 195 IDV----TTPTAGEI-PEASQCSC 213
>gi|395757271|ref|XP_003780268.1| PREDICTED: ras-related protein Rab-6C-like [Pongo abelii]
Length = 254
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 166/205 (80%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+ITRFMYD FDNTYQATIGIDFLSKTMYLED T+RL LWD
Sbjct: 9 NPLTKFKLVFLGEQSVAKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDGTIRLPLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIPSYIRDS+ AVVVY + + SF T+KWID+VRTERGSDVII LVGNKT
Sbjct: 69 TAGQERLRSLIPSYIRDSAAAVVVYGITNVNSFQQTTKWIDDVRTERGSDVIITLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K+++LNVMFIETSAKAG+N+K LFR++AA LPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKQLNVMFIETSAKAGYNVKQLFRRVAAVLPGMESTQDGSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSS-GCSC 208
D+ L Q Q S GCSC
Sbjct: 189 SDIKLEK-----PQEQPVSERGCSC 208
>gi|440639268|gb|ELR09187.1| Ras-like protein Rab-6B [Geomyces destructans 20631-21]
Length = 209
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 173/206 (83%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS--TKQE 182
DL ++R+V+ ++GE ++++ N+MFIETSAK G NIK LFR+IA ALPGME S +
Sbjct: 131 DLNDRREVTTQQGEEEAKKNNLMFIETSAKVGHNIKNLFRRIAQALPGMEGADSAASAGN 190
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DVN+ N++QSQ GC+C
Sbjct: 191 QMIDVNI----NNSTQSQ---EGCAC 209
>gi|408398703|gb|EKJ77831.1| hypothetical protein FPSE_01924 [Fusarium pseudograminearum CS3096]
Length = 208
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 170/206 (82%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL EKR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 130 DLNEKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGSDAAAQASN 189
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV T N QSQ GC+C
Sbjct: 190 QMIDV----KTNNTQQSQ---EGCAC 208
>gi|340370332|ref|XP_003383700.1| PREDICTED: ras-related protein Rab-6A-like [Amphimedon
queenslandica]
Length = 210
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 143/205 (69%), Positives = 171/205 (83%), Gaps = 4/205 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF +KWI++VR ERG+DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFQQVNKWIEDVRAERGTDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEE 183
DL +KRQVS++EGE K++EL VMFIETSAKAG+N+K LFR++AAALPGME + +++
Sbjct: 129 DLQDKRQVSMDEGERKAQELGVMFIETSAKAGYNVKQLFRRVAAALPGMENNQEKQNKDD 188
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+V+V L N S Q + C C
Sbjct: 189 IVEVRLPE---NGSGEQQDENKCWC 210
>gi|342873488|gb|EGU75655.1| hypothetical protein FOXB_13843 [Fusarium oxysporum Fo5176]
Length = 208
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 171/206 (83%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 130 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGSDAAAQASN 189
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV T N+ QSQ GC+C
Sbjct: 190 QMIDV----KTNNSQQSQ---EGCAC 208
>gi|301093026|ref|XP_002997362.1| Rab6 family GTPase, putative [Phytophthora infestans T30-4]
gi|262110760|gb|EEY68812.1| Rab6 family GTPase, putative [Phytophthora infestans T30-4]
Length = 238
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 167/205 (81%), Gaps = 7/205 (3%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ LAKYKLVFLGDQ VGKTS+ITRFMYD FDN YQATIGIDFLSKTMY+EDRTVRLQLW
Sbjct: 41 IAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLW 100
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQ+ LIPSYIRDSSVAVVVYD+ +R SFLNTSKWI++VRTERG DV+I+LVGNK
Sbjct: 101 DTAGQD----LIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNK 156
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TD+ ++RQVSIEEG K++E NVMFIETSAKAG+NIK LFRK+A LPGME +
Sbjct: 157 TDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSN 216
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
++D+ L T + ++ + C+C
Sbjct: 217 LIDIKL---TAAPAPKENTAEQCNC 238
>gi|392864275|gb|EAS34901.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 209
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 171/204 (83%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G+N+K LFR+IA ALPGME + +M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIAQALPGMEGEAGRGDNQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N +Q S + GC+C
Sbjct: 192 IDVNI-----NPTQPVS-NEGCAC 209
>gi|212530474|ref|XP_002145394.1| RAS small monomeric GTPase Rab6, putative [Talaromyces marneffei
ATCC 18224]
gi|210074792|gb|EEA28879.1| RAS small monomeric GTPase Rab6, putative [Talaromyces marneffei
ATCC 18224]
Length = 209
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 171/204 (83%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGM+ + + +M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMDGEAQRGENQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N SQ + + GC+C
Sbjct: 192 IDVNI-----NPSQP-TNNDGCAC 209
>gi|389644110|ref|XP_003719687.1| Ras-like protein Rab-6A [Magnaporthe oryzae 70-15]
gi|351639456|gb|EHA47320.1| Ras-like protein Rab-6A [Magnaporthe oryzae 70-15]
Length = 209
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 171/206 (83%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDGMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE ++++ N+MFIETSAK G N++PLF++IA +LPGME + +Q
Sbjct: 131 DLNDKREVTTQQGEEEAKKNNLMFIETSAKVGHNVQPLFKRIARSLPGMEGTEAAQQAAS 190
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV +T Q+Q GC+C
Sbjct: 191 QMIDVKTNNT-------QAQQEGCAC 209
>gi|326671399|ref|XP_003199429.1| PREDICTED: ras-related protein Rab-6A-like [Danio rerio]
Length = 192
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 161/192 (83%), Gaps = 4/192 (2%)
Query: 17 DQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 76
D +VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIP
Sbjct: 5 DFAVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIP 64
Query: 77 SYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEE 136
SYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEE
Sbjct: 65 SYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEE 124
Query: 137 GEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNA 196
GE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L
Sbjct: 125 GERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLE----KP 180
Query: 197 SQSQSQSSGCSC 208
+ GCSC
Sbjct: 181 PEQPVSEGGCSC 192
>gi|354499457|ref|XP_003511825.1| PREDICTED: ras-related protein Rab-6A-like [Cricetulus griseus]
Length = 188
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/191 (73%), Positives = 162/191 (84%), Gaps = 6/191 (3%)
Query: 19 SVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
+VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSY
Sbjct: 3 TVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 62
Query: 79 IRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGE 138
IRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE
Sbjct: 63 IRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGE 122
Query: 139 AKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQ 198
K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L Q
Sbjct: 123 RKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEK-----PQ 177
Query: 199 SQSQS-SGCSC 208
Q S GCSC
Sbjct: 178 EQPVSEGGCSC 188
>gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
Length = 219
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/168 (82%), Positives = 154/168 (91%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 1 MRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 60
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAVVVYD+ +R SF NTSKW+D+VR ERG+DVIIVLVGNKTDL
Sbjct: 61 GQERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDL 120
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KRQV+ EE E K++E NVMFIETSAKAG N+K LF+KIA ALPGM+
Sbjct: 121 SDKRQVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALPGMD 168
>gi|410971408|ref|XP_003992161.1| PREDICTED: uncharacterized protein LOC101087341 [Felis catus]
Length = 832
Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats.
Identities = 136/191 (71%), Positives = 160/191 (83%), Gaps = 4/191 (2%)
Query: 18 QSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 77
Q VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS
Sbjct: 646 QGVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 705
Query: 78 YIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEG 137
YIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEG
Sbjct: 706 YIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEG 765
Query: 138 EAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNAS 197
E +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L
Sbjct: 766 EQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL----DKPQ 821
Query: 198 QSQSQSSGCSC 208
+ + GCSC
Sbjct: 822 EPPASEGGCSC 832
>gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6 [Aspergillus fumigatus Af293]
gi|119481981|ref|XP_001261019.1| rab6 [Neosartorya fischeri NRRL 181]
gi|66853530|gb|EAL93854.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus
Af293]
gi|119409173|gb|EAW19122.1| rab6 [Neosartorya fischeri NRRL 181]
gi|159129947|gb|EDP55061.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus
A1163]
Length = 207
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 171/206 (83%), Gaps = 11/206 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGME + ++ +M
Sbjct: 131 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEG-EANRESQM 189
Query: 185 VDVNL--RSTTGNASQSQSQSSGCSC 208
+DVN+ R TT N GC+C
Sbjct: 190 IDVNINPRETTSN--------DGCAC 207
>gi|453081493|gb|EMF09542.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 207
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 168/204 (82%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ S++SF T KW+D+VR ERGSDVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITSKKSFEQTRKWVDDVRGERGSDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKR+V+ ++GE +S+ L MF+ETSAK G N+K LF+KIA ALPGME
Sbjct: 130 DLGEKREVTAQQGEEESKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQGPANT 189
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ NA++ +S+ GC+C
Sbjct: 190 IDVNV-----NAAKPESE-GGCNC 207
>gi|20071543|gb|AAH26915.1| Rab6 protein, partial [Mus musculus]
Length = 184
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/188 (73%), Positives = 159/188 (84%), Gaps = 4/188 (2%)
Query: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR
Sbjct: 1 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 60
Query: 81 DSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAK 140
DS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K
Sbjct: 61 DSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERK 120
Query: 141 SRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQ 200
++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L +
Sbjct: 121 AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLE----KPQEQP 176
Query: 201 SQSSGCSC 208
GCSC
Sbjct: 177 VNEGGCSC 184
>gi|145251179|ref|XP_001397103.1| Ras-related protein Rab-6A [Aspergillus niger CBS 513.88]
gi|134082633|emb|CAK42527.1| unnamed protein product [Aspergillus niger]
gi|350636440|gb|EHA24800.1| hypothetical protein ASPNIDRAFT_40721 [Aspergillus niger ATCC 1015]
gi|358373872|dbj|GAA90468.1| secretion related GTPase C [Aspergillus kawachii IFO 4308]
Length = 209
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGME ++ +M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEANRGDNQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ + + + GC+C
Sbjct: 192 IDVNI------TPKETTTNDGCAC 209
>gi|348555281|ref|XP_003463452.1| PREDICTED: ras-related protein Rab-6A-like [Cavia porcellus]
Length = 214
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 167/204 (81%), Gaps = 8/204 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SAL+ + ++ + VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 19 SALSLHGIL----RPVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 75 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 135 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 194
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 195 IDIKLE----KPQEQPVTEGGCSC 214
>gi|326924238|ref|XP_003208337.1| PREDICTED: ras-related protein Rab-6A-like [Meleagris gallopavo]
Length = 200
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/189 (72%), Positives = 161/189 (85%), Gaps = 4/189 (2%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 16 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 75
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+VAV+V+D+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE
Sbjct: 76 RDSAVAVIVFDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 135
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQS 199
K+RELN+M+IETSAKAG+N+K LFR++AAALPGM++ +E+M+D+ L +
Sbjct: 136 KARELNMMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDMIDIKLE----KPPEQ 191
Query: 200 QSQSSGCSC 208
SGCSC
Sbjct: 192 PVTESGCSC 200
>gi|338727025|ref|XP_001496149.3| PREDICTED: ras-related protein Rab-6A-like [Equus caballus]
Length = 187
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/190 (74%), Positives = 161/190 (84%), Gaps = 6/190 (3%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 3 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 62
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE
Sbjct: 63 RDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 122
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQS 199
K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L Q
Sbjct: 123 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEK-----PQE 177
Query: 200 QSQS-SGCSC 208
Q S GCSC
Sbjct: 178 QPVSEGGCSC 187
>gi|255953207|ref|XP_002567356.1| Pc21g02920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589067|emb|CAP95189.1| Pc21g02920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 208
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 169/206 (82%), Gaps = 10/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGME + + M
Sbjct: 131 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEAKQGESTM 190
Query: 185 VDVNL--RSTTGNASQSQSQSSGCSC 208
+DVN+ + TT N GC+C
Sbjct: 191 IDVNISPKETTSN--------DGCAC 208
>gi|258573301|ref|XP_002540832.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
gi|237901098|gb|EEP75499.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
Length = 210
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 171/204 (83%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYL+DRTVRLQLWD
Sbjct: 13 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLDDRTVRLQLWD 72
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 73 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 132
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G+N+K LFR+IA ALPGME + +M
Sbjct: 133 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIANALPGMEGEAGRGDNQM 192
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N +Q S + GC+C
Sbjct: 193 IDVNI-----NPTQPVS-NDGCAC 210
>gi|299753222|ref|XP_001833137.2| ryh1 [Coprinopsis cinerea okayama7#130]
gi|298410200|gb|EAU88826.2| ryh1 [Coprinopsis cinerea okayama7#130]
Length = 214
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/200 (69%), Positives = 170/200 (85%), Gaps = 5/200 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 20 RTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDSSVA+VV+D+ +RQSFL+T+KWID+VR+ERG+DVIIVLVGNK DL +
Sbjct: 80 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKADLSD 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KRQV++EE K+ +LN+MF+ETSAKAG N+K LF+KIA +LPGME ++ + +DV
Sbjct: 140 KRQVTVEEATTKATQLNIMFMETSAKAGHNVKSLFKKIAMSLPGMEKDATAEANTKIDV- 198
Query: 189 LRSTTGNASQSQSQSSGCSC 208
+T A++ ++S C+C
Sbjct: 199 ---STPTAAEV-PEASQCNC 214
>gi|425767204|gb|EKV05779.1| hypothetical protein PDIP_81350 [Penicillium digitatum Pd1]
gi|425769088|gb|EKV07595.1| hypothetical protein PDIG_72080 [Penicillium digitatum PHI26]
Length = 209
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGME + + M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEAKQGESTM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ + + + + GC+C
Sbjct: 192 IDVNI------SPKETTTNDGCAC 209
>gi|169762832|ref|XP_001727316.1| Ras-related protein Rab-6A [Aspergillus oryzae RIB40]
gi|238488653|ref|XP_002375564.1| RAS small monomeric GTPase Rab6, putative [Aspergillus flavus
NRRL3357]
gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697952|gb|EED54292.1| RAS small monomeric GTPase Rab6, putative [Aspergillus flavus
NRRL3357]
gi|391866828|gb|EIT76096.1| GTPase Rab6/YPT6/Ryh1, small G protein superfamily [Aspergillus
oryzae 3.042]
Length = 209
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 170/206 (82%), Gaps = 10/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGME S + ++
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEGSRGESQV 191
Query: 185 VDVNL--RSTTGNASQSQSQSSGCSC 208
+DVN+ + TT N GC+C
Sbjct: 192 IDVNINPKETTTN--------DGCAC 209
>gi|268576735|ref|XP_002643347.1| C. briggsae CBR-RAB-6.2 protein [Caenorhabditis briggsae]
Length = 205
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/181 (77%), Positives = 160/181 (88%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ +EGE K++ELNVMFIETSAKAG+N+K LFR+IA ALPG+ +Q +
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVEQPNV 185
Query: 185 V 185
V
Sbjct: 186 V 186
>gi|341903589|gb|EGT59524.1| CBN-RAB-6.2 protein [Caenorhabditis brenneri]
Length = 205
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/169 (81%), Positives = 156/169 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL +KRQV+ +EGE K++ELNVMFIETSAKAG+N+K LFR+IA ALPG+
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGI 174
>gi|302692114|ref|XP_003035736.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
gi|300109432|gb|EFJ00834.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
Length = 210
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 169/204 (82%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 SPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA+VV+D+ +RQSFL+TSKWID+VR+ERG+DVIIVLVGNK
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKA 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV++EE AK+++LN+MF+ETSAKAG N+K LF+KIA +LPGM+ +
Sbjct: 132 DLSDKRQVTLEEATAKAQQLNIMFMETSAKAGHNVKSLFKKIAMSLPGMDKEGQSDANTK 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV+ + TG ++S C C
Sbjct: 192 IDVST-AQTGEV----PEASQCQC 210
>gi|308489025|ref|XP_003106706.1| CRE-RAB-6.2 protein [Caenorhabditis remanei]
gi|308253360|gb|EFO97312.1| CRE-RAB-6.2 protein [Caenorhabditis remanei]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/169 (81%), Positives = 156/169 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL +KRQV+ +EGE K++ELNVMFIETSAKAG+N+K LFR+IA ALPG+
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGI 174
>gi|17570073|ref|NP_510790.1| Protein RAB-6.2 [Caenorhabditis elegans]
gi|74966331|sp|Q22782.1|RAB6B_CAEEL RecName: Full=Ras-related protein Rab-6.2
gi|351059242|emb|CCD74453.1| Protein RAB-6.2 [Caenorhabditis elegans]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/169 (81%), Positives = 156/169 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL +KRQV+ +EGE K++ELNVMFIETSAKAG+N+K LFR+IA ALPG+
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGI 174
>gi|294881140|ref|XP_002769264.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|294956149|ref|XP_002788825.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239872542|gb|EER01982.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239904437|gb|EER20621.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 167/206 (81%), Gaps = 5/206 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD+ YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 3 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDSNYQATIGIDFLSKTMYLEDRTVRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ ++ SF+N KWID+VRTERG+DVII+LVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVAVVVYDITNKASFMNCEKWIDDVRTERGNDVIIMLVGNKT 122
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQE 182
DL +KRQVS EEGE K++E VMF E SAKAG+NIK LFRK+AAALP Q
Sbjct: 123 DLADKRQVSTEEGEQKAKEQGVMFTECSAKAGYNIKALFRKLAAALPQSNDQGAGQQGQN 182
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
++VD+ L ++ S+ + + C+C
Sbjct: 183 QIVDIQLNASN---SEPEEHARKCAC 205
>gi|390597749|gb|EIN07148.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 214
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/200 (70%), Positives = 167/200 (83%), Gaps = 4/200 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 19 RTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDSSVA+VV+D+ +R SFL+TSKWID+VR+ERG+DVIIVLVGNK DL +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KRQV++EE KS+E+NVMF+ETSAKAG N+K LF+KIA +LPGME S ++ +
Sbjct: 139 KRQVTLEEATTKSQEMNVMFMETSAKAGHNVKSLFKKIAMSLPGME---SQADKDAANTK 195
Query: 189 LRSTTGNASQSQSQSSGCSC 208
+ TT A+ ++S C C
Sbjct: 196 IDVTTTKAADV-PEASQCQC 214
>gi|310795170|gb|EFQ30631.1| Ras family protein [Glomerella graminicola M1.001]
Length = 209
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 169/206 (82%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 131 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTDAAAQASS 190
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV + +QS GC+C
Sbjct: 191 QMIDV-------KTTPAQSSQEGCAC 209
>gi|452978536|gb|EME78299.1| hypothetical protein MYCFIDRAFT_190637 [Pseudocercospora fijiensis
CIRAD86]
Length = 207
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 167/204 (81%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ S++SF T KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITSQKSFQQTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKR+V+ ++GE +S+ L MF+ETSAK G N+K LF+KIA ALPGME
Sbjct: 130 DLSEKREVTAQQGEEESKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQGPANT 189
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ NA + +S+ GC+C
Sbjct: 190 IDVNV-----NAQKPESE-GGCNC 207
>gi|399163147|gb|AFP33149.1| rab-6.2, partial [Caenorhabditis elegans]
Length = 204
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/169 (81%), Positives = 156/169 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 5 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 124
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL +KRQV+ +EGE K++ELNVMFIETSAKAG+N+K LFR+IA ALPG+
Sbjct: 125 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGI 173
>gi|409082156|gb|EKM82514.1| hypothetical protein AGABI1DRAFT_111121 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199982|gb|EKV49906.1| GTP binding protein [Agaricus bisporus var. bisporus H97]
Length = 214
Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/200 (69%), Positives = 170/200 (85%), Gaps = 5/200 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 20 RTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDSSVA+VV+D+ +RQSF++T+KWI++VR+ERG+DVIIVLVGNK DL +
Sbjct: 80 ERFRSLIPSYIRDSSVAIVVFDITNRQSFMSTTKWIEDVRSERGNDVIIVLVGNKADLSD 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KRQV++EE AK+ +LN+MF+ETSAKAG N+K LF+KIA +LPGME + + +DV
Sbjct: 140 KRQVTLEEATAKATQLNIMFMETSAKAGHNVKGLFKKIAMSLPGMEKENQSDTNTKIDV- 198
Query: 189 LRSTTGNASQSQSQSSGCSC 208
TT +A + ++S C+C
Sbjct: 199 ---TTSSAGEV-PEASSCNC 214
>gi|380485929|emb|CCF39041.1| Ras-like protein Rab-6A [Colletotrichum higginsianum]
Length = 209
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 169/206 (82%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 131 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGSDAATQASS 190
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV + +QS GC+C
Sbjct: 191 QMIDV-------KTAPAQSSQEGCAC 209
>gi|294873005|ref|XP_002766487.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239867367|gb|EEQ99204.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 205
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 166/206 (80%), Gaps = 5/206 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD+ YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 3 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDSNYQATIGIDFLSKTMYLEDRTVRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVV YD+ ++ SF+N KWID+VRTERG+DVII+LVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVAVVGYDITNKASFMNCEKWIDDVRTERGNDVIIMLVGNKT 122
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQE 182
DL +KRQVS EEGE K++E VMF E SAKAG+NIK LFRK+AAALP Q
Sbjct: 123 DLADKRQVSTEEGEQKAKEQGVMFTECSAKAGYNIKALFRKLAAALPQSNDQGAGQQGQS 182
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
++VD+ L ++ S+ Q + C+C
Sbjct: 183 QIVDIQLNASN---SEPQEHAKKCAC 205
>gi|225558550|gb|EEH06834.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|240274987|gb|EER38502.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 209
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGM+ + +M
Sbjct: 132 DLNDKREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGANQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N +Q S + GC+C
Sbjct: 192 IDVNI-----NPTQPVS-NDGCAC 209
>gi|393216771|gb|EJD02261.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 165/204 (80%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 15 SPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA+VV+D+ +RQSFL+T KWIDEVR+ERG+DVIIVLVGNK
Sbjct: 75 TAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTRKWIDEVRSERGNDVIIVLVGNKA 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V++E+ + + EL +MF+ETSAKAG N+K LFRKIA ALPGME S+ E
Sbjct: 135 DLSDKREVTLEQAQELADELKIMFMETSAKAGHNVKSLFRKIALALPGMEKESAATDAEN 194
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
V++ N ++S C C
Sbjct: 195 NKVDVTKPNEN---EIPEASNCQC 215
>gi|261193297|ref|XP_002623054.1| rab6 [Ajellomyces dermatitidis SLH14081]
gi|239588659|gb|EEQ71302.1| rab6 [Ajellomyces dermatitidis SLH14081]
gi|239614016|gb|EEQ91003.1| rab6 [Ajellomyces dermatitidis ER-3]
gi|327353362|gb|EGE82219.1| GTP-binding protein ryh1 [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGM+ + +M
Sbjct: 132 DLNDKREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGANQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N +Q S + GC+C
Sbjct: 192 IDVNI-----NPTQPVS-NDGCAC 209
>gi|325094335|gb|EGC47645.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 209
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGM+ + +M
Sbjct: 132 DLNDKREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRIAQALPGMDDDAGRGANQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N +Q S + GC+C
Sbjct: 192 IDVNI-----NPTQPVS-NDGCAC 209
>gi|398391937|ref|XP_003849428.1| hypothetical protein MYCGRDRAFT_101238 [Zymoseptoria tritici
IPO323]
gi|339469305|gb|EGP84404.1| hypothetical protein MYCGRDRAFT_101238 [Zymoseptoria tritici
IPO323]
Length = 207
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 167/204 (81%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYDV S++SF T KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDVTSQKSFAQTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKR+V+ ++GE +++ L MF+ETSAK G N+K LF+KIA ALPGME
Sbjct: 130 DLNEKREVTAQQGEEEAKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQAAANT 189
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N ++ +S+ GC+C
Sbjct: 190 IDVNV-----NQTKPESE-GGCNC 207
>gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254827|gb|EAL17571.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 213
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 166/204 (81%), Gaps = 7/204 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 17 TPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 76
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ +R SF NTSKW+D+VR ERG DVIIVLVGNKT
Sbjct: 77 TAGQERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLVGNKT 136
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ E+ + +++EL VM IETSAKAG N+K LF+KIA ALPG S K
Sbjct: 137 DLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGG---SEAKDNGT 193
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+++ S + Q Q+SGCSC
Sbjct: 194 TKIDVSS----SPQEVPQASGCSC 213
>gi|110590290|pdb|2GIL|A Chain A, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590291|pdb|2GIL|B Chain B, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590292|pdb|2GIL|C Chain C, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590293|pdb|2GIL|D Chain D, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
Length = 162
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/162 (84%), Positives = 153/162 (94%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +
Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 120
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAAL
Sbjct: 121 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 162
>gi|156349251|ref|XP_001621980.1| hypothetical protein NEMVEDRAFT_v1g176370 [Nematostella vectensis]
gi|156208357|gb|EDO29880.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 167/207 (80%), Gaps = 7/207 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + SF TSKWID+VRTERG+DVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNYNSFQQTSKWIDDVRTERGNDVIIMLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG---METLSSTKQ 181
DL +KRQV+ EEGE K++ELNVMFIETSAKAG+N+K ++R +A LP M T +
Sbjct: 127 DLSDKRQVTAEEGERKAKELNVMFIETSAKAGYNVKQMYRNLALELPAGKDMMTEWGEYE 186
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
++++ V L+ T Q + C C
Sbjct: 187 DDLIKVTLQHT----PQQLDNAGSCGC 209
>gi|452838904|gb|EME40844.1| hypothetical protein DOTSEDRAFT_178065 [Dothistroma septosporum
NZE10]
Length = 207
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 166/204 (81%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ S++SF T KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITSKKSFEQTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKR+V+ + GE +S+ L MF+ETSAK G N+K LF+KIA ALPGME
Sbjct: 130 DLSEKREVTAQMGEEESKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQGVANT 189
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ NA + +S+ GC+C
Sbjct: 190 IDVNV-----NAPKPESE-GGCNC 207
>gi|367053789|ref|XP_003657273.1| hypothetical protein THITE_2152148 [Thielavia terrestris NRRL 8126]
gi|347004538|gb|AEO70937.1| hypothetical protein THITE_2152148 [Thielavia terrestris NRRL 8126]
Length = 210
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/206 (68%), Positives = 168/206 (81%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE +++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 132 DLNDKREVTTQQGEEEAKRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTDAAAQASS 191
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV T A Q Q GC+C
Sbjct: 192 QMIDVK----TPAAPQPQ---EGCAC 210
>gi|355560026|gb|EHH16754.1| hypothetical protein EGK_12093, partial [Macaca mulatta]
gi|355747048|gb|EHH51662.1| hypothetical protein EGM_11085, partial [Macaca fascicularis]
Length = 186
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 160/190 (84%), Gaps = 4/190 (2%)
Query: 19 SVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
+VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 1 TVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 60
Query: 79 IRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGE 138
IRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE
Sbjct: 61 IRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGE 120
Query: 139 AKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQ 198
+++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L +
Sbjct: 121 QRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL----DKPQE 176
Query: 199 SQSQSSGCSC 208
+ GCSC
Sbjct: 177 PPASEGGCSC 186
>gi|406868593|gb|EKD21630.1| Ras family protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 208
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 169/206 (82%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL--SSTKQE 182
DL +KR+V+ ++GE ++++ N+MFIETSAK G N+K LF++IA ALPGM+ S+
Sbjct: 130 DLNDKREVTTQQGEEEAKKNNLMFIETSAKVGHNVKNLFKRIAQALPGMDGAEGSAATGN 189
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV++ T N GC+C
Sbjct: 190 QMIDVSINPTPAN-------QEGCAC 208
>gi|295667515|ref|XP_002794307.1| GTP-binding protein YPT52 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286413|gb|EEH41979.1| GTP-binding protein YPT52 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226291866|gb|EEH47294.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 209
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL ++R+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGM+ + +M
Sbjct: 132 DLNDRREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGANQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N +Q S + GC+C
Sbjct: 192 IDVNI-----NPTQPVS-NDGCAC 209
>gi|432108419|gb|ELK33169.1| Ras-related protein Rab-6B [Myotis davidii]
Length = 207
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 168/213 (78%), Gaps = 11/213 (5%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M P +A K VF G+ +GKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MPPPQPVANDKAVFPGE--LGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRL 58
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LV
Sbjct: 59 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLV 118
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME +
Sbjct: 119 GNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKS 178
Query: 181 QE-----EMVDVNLRSTTGNASQSQSQSSGCSC 208
+E ++D+ L + + GCSC
Sbjct: 179 KEGTLPPAVIDIKL----DKPQEPPASEGGCSC 207
>gi|297672011|ref|XP_002814109.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Pongo abelii]
gi|332818086|ref|XP_001147918.2| PREDICTED: ras-related protein Rab-6B [Pan troglodytes]
gi|397503905|ref|XP_003822555.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Pan paniscus]
gi|402861533|ref|XP_003895144.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Papio anubis]
gi|426342172|ref|XP_004036387.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Gorilla gorilla
gorilla]
gi|221040792|dbj|BAH12073.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 159/189 (84%), Gaps = 4/189 (2%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 11 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 70
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE
Sbjct: 71 RDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQ 130
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQS 199
+++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L +
Sbjct: 131 RAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL----DKPQEP 186
Query: 200 QSQSSGCSC 208
+ GCSC
Sbjct: 187 PASEGGCSC 195
>gi|403265828|ref|XP_003925114.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 195
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 159/189 (84%), Gaps = 4/189 (2%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 11 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 70
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE
Sbjct: 71 RDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQ 130
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQS 199
+++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L +
Sbjct: 131 RAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL----DKPQEP 186
Query: 200 QSQSSGCSC 208
+ GCSC
Sbjct: 187 PASEGGCSC 195
>gi|393245652|gb|EJD53162.1| GTP binding protein [Auricularia delicata TFB-10046 SS5]
Length = 214
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 169/204 (82%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 15 SPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA+VV+D+ +R SFL+T+KWID+VR+ERGSDVIIVLVGNK
Sbjct: 75 TAGQERFRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGSDVIIVLVGNKA 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ EE K+ E+N+MF+ETSAKAG N+K LF+KIA +LPG+E +S +
Sbjct: 135 DLSDKRQVTHEEATNKATEMNIMFMETSAKAGHNVKSLFKKIAMSLPGVEKEASADAQN- 193
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+++++T N ++S C+C
Sbjct: 194 AKIDVKNTPVN---EVPEASTCNC 214
>gi|402082888|gb|EJT77906.1| Ras-like protein Rab-6A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 209
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 170/204 (83%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWI++VR ERG+DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIEDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + +Q
Sbjct: 131 DLNDKRQVTTQQGEDEAKKFNLMFVETSAKVGHNVKNLFKRIALALPGMEGTEAAQQATS 190
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
++++S + +Q+ + C+C
Sbjct: 191 QIIDIKS-----NNTQAANEPCAC 209
>gi|392595561|gb|EIW84884.1| GTP binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 214
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/201 (68%), Positives = 165/201 (82%), Gaps = 6/201 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 19 RTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 78
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDSSVA+VV+D+ +RQSFL+T+KWI++VR+ERG+DVIIVLVGNK DL +
Sbjct: 79 ERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIEDVRSERGNDVIIVLVGNKADLSD 138
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-STKQEEMVDV 187
KRQV++EE KS E+N+MF+ETSAKAG N+K LF+KIA +LPGME + Q +DV
Sbjct: 139 KRQVTLEEATTKSTEMNIMFMETSAKAGHNVKSLFKKIALSLPGMEKEGQADAQNTKIDV 198
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
T ++S C+C
Sbjct: 199 -----TSTQPAPVPEASQCNC 214
>gi|397611796|gb|EJK61478.1| hypothetical protein THAOC_18027, partial [Thalassiosira oceanica]
Length = 307
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 168/216 (77%), Gaps = 13/216 (6%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A V+ LAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 96 ASVAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQ 155
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYDV +R SFLNTSKW+++VR ERG+DV+I LVG
Sbjct: 156 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRASFLNTSKWVEDVRAERGNDVVICLVG 215
Query: 122 NKTDL-VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET----- 175
NKTDL +KRQVS EEGE K+ + N++F+E SAKAG+N+K LFRK+A +LPG +
Sbjct: 216 NKTDLGNDKRQVSTEEGEEKATKDNLLFMECSAKAGYNVKSLFRKLATSLPGTDAQNGAA 275
Query: 176 ---LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ ++D+ L N +++ GC C
Sbjct: 276 GANTAGAGGSNLIDIKLSQAPANLDEAK----GCGC 307
>gi|392567066|gb|EIW60241.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 214
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 168/212 (79%), Gaps = 9/212 (4%)
Query: 3 PVSA------LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR 56
PV+A L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSK MYLEDR
Sbjct: 6 PVTADFSSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDR 65
Query: 57 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVI 116
TVRLQLWDTAGQER+RSLIPSYIRD SVA+VV+D+ +RQSFL+TSKWID+VR+ERG+DVI
Sbjct: 66 TVRLQLWDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVI 125
Query: 117 IVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
IVLVGNK DL +KRQV++EE AK++ELN+MF+ETSAKAG N+K LF+KIA +L GME
Sbjct: 126 IVLVGNKADLSDKRQVTLEEANAKAQELNIMFMETSAKAGHNVKSLFKKIAMSLVGMEKE 185
Query: 177 SSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + +++ S N SQ C C
Sbjct: 186 NEAADAQNTKIDVTSPPTNEVPDASQ---CQC 214
>gi|353236471|emb|CCA68465.1| probable YPT6-GTP-binding protein of the rab family [Piriformospora
indica DSM 11827]
Length = 219
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 165/205 (80%), Gaps = 1/205 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 15 SPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA+VVYD+ +R SFL+TSKWID+VR+ERG+DVIIVLVGNK
Sbjct: 75 TAGQERFRSLIPSYIRDSSVAIVVYDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKA 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTKQEE 183
DL +KRQV+ EE K+ +LN+MF+ETSAKAG N+K LF+KIA ALPGM+ ST
Sbjct: 135 DLSDKRQVTHEEASTKATQLNLMFMETSAKAGHNVKSLFKKIAMALPGMDNGAGSTGPAG 194
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+ V + ++ ++S C C
Sbjct: 195 VEAVAQKIDVSESAAKVPEASQCQC 219
>gi|367032973|ref|XP_003665769.1| hypothetical protein MYCTH_2309779 [Myceliophthora thermophila ATCC
42464]
gi|347013041|gb|AEO60524.1| hypothetical protein MYCTH_2309779 [Myceliophthora thermophila ATCC
42464]
Length = 210
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 166/204 (81%), Gaps = 5/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ ++GE +++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 132 DLNDKREVTTQQGEEEAKRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTDAAAQASS 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+++++ A Q GC+C
Sbjct: 192 QMIDVKTPAAPAPQ-----EGCAC 210
>gi|148684518|gb|EDL16465.1| RAB6, member RAS oncogene family, isoform CRA_d [Mus musculus]
Length = 179
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/170 (78%), Positives = 154/170 (90%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
+GKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 1 LGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 60
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE
Sbjct: 61 RDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 120
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L
Sbjct: 121 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKL 170
>gi|400599769|gb|EJP67460.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 208
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 169/206 (82%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKT++ITRFMYD FDN YQAT+GIDF SKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTALITRFMYDCFDNMYQATVGIDFFSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYDV++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDVSNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 130 DLNDKREVTTQQGEDEAKKNNLMFVETSAKLGHNVKHLFKRIAQALPGMEGTDAAAQASS 189
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+++DV T A Q+Q GCSC
Sbjct: 190 QIIDVK----TNTAQQAQ---EGCSC 208
>gi|171683621|ref|XP_001906753.1| hypothetical protein [Podospora anserina S mat+]
gi|170941770|emb|CAP67424.1| unnamed protein product [Podospora anserina S mat+]
Length = 213
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 169/210 (80%), Gaps = 14/210 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME------TLSS 178
DL +KR+V+ +GE ++R+ N+MF+ETSAKAG N+K LF+KIA ALPGME S+
Sbjct: 132 DLNDKREVTTAQGEEEARKNNLMFVETSAKAGHNVKNLFKKIAQALPGMEGADGSAAASA 191
Query: 179 TKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV +STT Q GC C
Sbjct: 192 QASSQMIDV--KSTT------TPQQDGCGC 213
>gi|410057389|ref|XP_003954210.1| PREDICTED: ras-related protein Rab-6C-like [Pan troglodytes]
Length = 254
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 164/205 (80%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+ITRFMYD FDNTYQATIGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ LNV FIET AKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVRFIETRAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
D+ L Q Q S GCSC
Sbjct: 189 SDIKLEK-----PQEQPVSEGGCSC 208
>gi|358396900|gb|EHK46275.1| secretion-related small GTPase RAB6/RYH1/SRG3 [Trichoderma
atroviride IMI 206040]
Length = 207
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 167/206 (81%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE +++ + F+ETSAK G N++ LF++IA ALPGME S Q
Sbjct: 129 DLNDKREVTTQQGEEEAKRQGLRFVETSAKLGHNVQNLFKRIAQALPGMEGSDSATQATN 188
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV R+ T Q Q GCSC
Sbjct: 189 QMIDV--RTNT-----QQPQQEGCSC 207
>gi|325303662|tpg|DAA34344.1| TPA_inf: Rab6 subfamily protein [Amblyomma variegatum]
Length = 174
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/166 (81%), Positives = 154/166 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERG+DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
DL +KRQV+ EEGE K++ELNVMFIETSAK+G+N+K LFR++AAAL
Sbjct: 129 DLSDKRQVTTEEGERKAKELNVMFIETSAKSGYNVKQLFRRVAAAL 174
>gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergillus niger]
Length = 210
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 169/205 (82%), Gaps = 7/205 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE- 183
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGME ++ +
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEANRGDNQT 191
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
++DVN+ + + + GC+C
Sbjct: 192 VIDVNI------TPKETTTNDGCAC 210
>gi|290993933|ref|XP_002679587.1| rab small GTPase [Naegleria gruberi]
gi|284093204|gb|EFC46843.1| rab small GTPase [Naegleria gruberi]
Length = 230
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 168/217 (77%), Gaps = 17/217 (7%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYK+VFLGDQ+VGKTSIITRFMYD FD TY TIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 14 KYKIVFLGDQAVGKTSIITRFMYDSFDTTYHNTIGIDFLSKTMYLEDRTVRLQLWDTAGQ 73
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV- 127
ERFRSLIPSYIRDSSVA++VYD+ S+QSF+NT+KWI++VRTERG DVI+VLVGNKTDL
Sbjct: 74 ERFRSLIPSYIRDSSVAIIVYDITSKQSFMNTNKWIEDVRTERGDDVIVVLVGNKTDLAS 133
Query: 128 --EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ---- 181
+KRQVSIEEGE+K++E +MF+ETSAKAG+NIK LF K+A ALP S+T
Sbjct: 134 DSDKRQVSIEEGESKAKEYGIMFLETSAKAGYNIKTLFTKVANALPTAVDASATSNPTPS 193
Query: 182 ------EEMVDVNLRST----TGNASQSQSQSSGCSC 208
++ V LR T + S S+ +S C C
Sbjct: 194 TPTTSGNDVFLVPLRQTKLPESTQESTSEQPASYCQC 230
>gi|395333800|gb|EJF66177.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 214
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 168/212 (79%), Gaps = 9/212 (4%)
Query: 3 PVSA------LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR 56
PV+A L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSK MYLEDR
Sbjct: 6 PVTADFSSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDR 65
Query: 57 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVI 116
TVRLQLWDTAGQER+RSLIPSYIRD SVA+VV+D+ +RQSFL+TSKWID+VR+ERG+DVI
Sbjct: 66 TVRLQLWDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVI 125
Query: 117 IVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
IVLVGNK DL +KRQV++EE AK+ +LN+MF+ETSAKAG N+K LF+KIA +L GME
Sbjct: 126 IVLVGNKADLSDKRQVTLEEANAKATQLNIMFMETSAKAGHNVKSLFKKIAMSLVGMEKE 185
Query: 177 SSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + + +++ S N SQ C C
Sbjct: 186 NEQSEAQNTKIDVTSPPQNEVPDASQ---CQC 214
>gi|296806631|ref|XP_002844115.1| GTP-binding protein ryh1 [Arthroderma otae CBS 113480]
gi|238845417|gb|EEQ35079.1| GTP-binding protein ryh1 [Arthroderma otae CBS 113480]
Length = 209
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 167/204 (81%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAVVVYD+++ +SF NT KW+D+VR ERG+DVII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ E+GE ++++ +MFIETSAK G N+K LF+KIA ALPGME ++ +M
Sbjct: 132 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGEATNSDNQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV++ T + CSC
Sbjct: 192 IDVSINPT------KPVSNDACSC 209
>gi|389749162|gb|EIM90339.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 170/205 (82%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
++L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKT+YL+DRTVRLQLWD
Sbjct: 15 TSLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTLYLDDRTVRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VA+VV+D+ +R SF++T+KWID+VR+ERG+DV++VLVGNK
Sbjct: 75 TAGQERFRSLIPSYIRDSTVAIVVFDITNRASFMSTTKWIDDVRSERGNDVMVVLVGNKA 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV++EE AKS++LN+MF+ETSAKAG N+K LF+KIA +LPGME K+ +
Sbjct: 135 DLSDKRQVTLEEATAKSQQLNIMFMETSAKAGHNVKSLFKKIAMSLPGME-----KENQN 189
Query: 185 VDVNLR-STTGNASQSQSQSSGCSC 208
+ N + T + ++S C C
Sbjct: 190 AEPNAKIDVTSPQTAEIPEASQCQC 214
>gi|430811133|emb|CCJ31387.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 203
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 157/194 (80%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+KLVFLGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 10 KFKLVFLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLI SYIRDSSVA+VVYD+ +R SF+NT++WID+++ ERG+DVIIV+VGNKTDL
Sbjct: 70 ERFRSLIASYIRDSSVAIVVYDITNRTSFINTNRWIDDIKAERGNDVIIVIVGNKTDLNN 129
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KRQV+ EEGE ++EL MF+ETSAK G N+K LF++I LPG+ MVDVN
Sbjct: 130 KRQVTTEEGEKMAKELKTMFMETSAKTGHNVKALFKEITLILPGIGNAHDLNNSLMVDVN 189
Query: 189 LRSTTGNASQSQSQ 202
+ N QS Q
Sbjct: 190 IGQREINPQQSNCQ 203
>gi|306014631|gb|ADM76369.1| Rab-like protein, partial [Picea sitchensis]
gi|306014633|gb|ADM76370.1| Rab-like protein, partial [Picea sitchensis]
gi|306014635|gb|ADM76371.1| Rab-like protein, partial [Picea sitchensis]
gi|306014637|gb|ADM76372.1| Rab-like protein, partial [Picea sitchensis]
gi|306014639|gb|ADM76373.1| Rab-like protein, partial [Picea sitchensis]
gi|306014641|gb|ADM76374.1| Rab-like protein, partial [Picea sitchensis]
gi|306014643|gb|ADM76375.1| Rab-like protein, partial [Picea sitchensis]
gi|306014645|gb|ADM76376.1| Rab-like protein, partial [Picea sitchensis]
gi|306014647|gb|ADM76377.1| Rab-like protein, partial [Picea sitchensis]
gi|306014649|gb|ADM76378.1| Rab-like protein, partial [Picea sitchensis]
gi|306014651|gb|ADM76379.1| Rab-like protein, partial [Picea sitchensis]
gi|306014653|gb|ADM76380.1| Rab-like protein, partial [Picea sitchensis]
gi|306014655|gb|ADM76381.1| Rab-like protein, partial [Picea sitchensis]
gi|306014657|gb|ADM76382.1| Rab-like protein, partial [Picea sitchensis]
gi|306014659|gb|ADM76383.1| Rab-like protein, partial [Picea sitchensis]
gi|306014661|gb|ADM76384.1| Rab-like protein, partial [Picea sitchensis]
gi|306014663|gb|ADM76385.1| Rab-like protein, partial [Picea sitchensis]
gi|306014665|gb|ADM76386.1| Rab-like protein, partial [Picea sitchensis]
gi|306014667|gb|ADM76387.1| Rab-like protein, partial [Picea sitchensis]
gi|306014669|gb|ADM76388.1| Rab-like protein, partial [Picea sitchensis]
gi|306014671|gb|ADM76389.1| Rab-like protein, partial [Picea sitchensis]
gi|306014673|gb|ADM76390.1| Rab-like protein, partial [Picea sitchensis]
gi|306014675|gb|ADM76391.1| Rab-like protein, partial [Picea sitchensis]
gi|306014677|gb|ADM76392.1| Rab-like protein, partial [Picea sitchensis]
gi|306014679|gb|ADM76393.1| Rab-like protein, partial [Picea sitchensis]
gi|306014681|gb|ADM76394.1| Rab-like protein, partial [Picea sitchensis]
gi|306014683|gb|ADM76395.1| Rab-like protein, partial [Picea sitchensis]
gi|306014685|gb|ADM76396.1| Rab-like protein, partial [Picea sitchensis]
gi|306014687|gb|ADM76397.1| Rab-like protein, partial [Picea sitchensis]
gi|306014689|gb|ADM76398.1| Rab-like protein, partial [Picea sitchensis]
gi|306014691|gb|ADM76399.1| Rab-like protein, partial [Picea sitchensis]
gi|306014693|gb|ADM76400.1| Rab-like protein, partial [Picea sitchensis]
gi|306014695|gb|ADM76401.1| Rab-like protein, partial [Picea sitchensis]
gi|306014697|gb|ADM76402.1| Rab-like protein, partial [Picea sitchensis]
gi|306014699|gb|ADM76403.1| Rab-like protein, partial [Picea sitchensis]
gi|306014701|gb|ADM76404.1| Rab-like protein, partial [Picea sitchensis]
gi|306014703|gb|ADM76405.1| Rab-like protein, partial [Picea sitchensis]
gi|306014705|gb|ADM76406.1| Rab-like protein, partial [Picea sitchensis]
gi|306014707|gb|ADM76407.1| Rab-like protein, partial [Picea sitchensis]
gi|306014709|gb|ADM76408.1| Rab-like protein, partial [Picea sitchensis]
gi|306014711|gb|ADM76409.1| Rab-like protein, partial [Picea sitchensis]
gi|306014713|gb|ADM76410.1| Rab-like protein, partial [Picea sitchensis]
gi|306014715|gb|ADM76411.1| Rab-like protein, partial [Picea sitchensis]
gi|306014717|gb|ADM76412.1| Rab-like protein, partial [Picea sitchensis]
Length = 160
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/161 (85%), Positives = 153/161 (95%), Gaps = 1/161 (0%)
Query: 48 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEV 107
SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+V+DVA+RQSFLNT++WI+EV
Sbjct: 1 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEV 60
Query: 108 RTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
RTERGSDVIIVLVGNKTDLV+KRQVSIEEG+AK+RE VMFIETSAKAGFNIK LFRKIA
Sbjct: 61 RTERGSDVIIVLVGNKTDLVDKRQVSIEEGDAKAREFGVMFIETSAKAGFNIKALFRKIA 120
Query: 168 AALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
AALPGMETLSSTKQE+MVDVNL+ T N+SQ++ ++ GCSC
Sbjct: 121 AALPGMETLSSTKQEDMVDVNLKPTV-NSSQAEQKAGGCSC 160
>gi|346326194|gb|EGX95790.1| RAS small monomeric GTPase Rab6 [Cordyceps militaris CM01]
Length = 208
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/206 (66%), Positives = 167/206 (81%), Gaps = 9/206 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKT++ITRFMYD FDN YQAT+GIDF SKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTALITRFMYDCFDNMYQATVGIDFFSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYDV++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDVSNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA +LPGME + Q
Sbjct: 130 DLNDKREVTTQQGEDEAKKNNLMFVETSAKLGHNVKNLFKRIAQSLPGMEGTDAAAQASS 189
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+++DV +T Q GCSC
Sbjct: 190 QIIDVKTNTT-------QQAQEGCSC 208
>gi|219122405|ref|XP_002181536.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406812|gb|EEC46750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 236
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 168/213 (78%), Gaps = 12/213 (5%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ LAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 28 LAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQLW 87
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVVVYDV++R SFLNT+KW+++VR ERG+DV+I LVGNK
Sbjct: 88 DTAGQERFRSLIPSYIRDSSVAVVVYDVSNRSSFLNTAKWVEDVRAERGNDVVICLVGNK 147
Query: 124 TDL-VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG-------MET 175
TDL +KRQVS EEGE ++ + ++F+E SAKAG+N+K LFRK+A ALPG
Sbjct: 148 TDLGNDKRQVSTEEGEERATKDGLLFMECSAKAGYNVKSLFRKLATALPGTADAANGNGA 207
Query: 176 LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
++ +VD+ L + N +++S C C
Sbjct: 208 NANANSANLVDIKLSAAPANIDEAKS----CGC 236
>gi|332814413|ref|XP_003309297.1| PREDICTED: ras-related protein Rab-6C-like [Pan troglodytes]
Length = 254
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 163/204 (79%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+ITRFMYD FDNTYQATIGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ LNV FIET AKAG+N+K LFR++AAA PGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVRFIETRAKAGYNVKQLFRRVAAASPGMESTQDRSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
D+ L Q SQ GCSC
Sbjct: 189 SDIKLEKP---QEQPVSQ-GGCSC 208
>gi|327304701|ref|XP_003237042.1| GTP-binding protein ryh1 [Trichophyton rubrum CBS 118892]
gi|326460040|gb|EGD85493.1| GTP-binding protein ryh1 [Trichophyton rubrum CBS 118892]
gi|326472998|gb|EGD97007.1| Ras small monomeric GTPase [Trichophyton tonsurans CBS 112818]
Length = 209
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 166/204 (81%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAVVVYD+++ +SF NT KW+D+VR ERG+DVII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ E+GE ++++ +MFIETSAK G N+K LF+KIA ALPGME + +M
Sbjct: 132 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGETPNSDNQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV++ T + C+C
Sbjct: 192 IDVSINPT------KPVSNDACAC 209
>gi|315045802|ref|XP_003172276.1| GTP-binding protein ryh1 [Arthroderma gypseum CBS 118893]
gi|311342662|gb|EFR01865.1| GTP-binding protein ryh1 [Arthroderma gypseum CBS 118893]
Length = 209
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 166/204 (81%), Gaps = 6/204 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAVVVYD+++ +SF NT KW+D+VR ERG+DVII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ E+GE ++++ +MFIETSAK G N+K LF+KIA ALPGME + +M
Sbjct: 132 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGETPNTDNQM 191
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV++ T + C+C
Sbjct: 192 IDVSINPT------KPVSNDACAC 209
>gi|449295568|gb|EMC91589.1| hypothetical protein BAUCODRAFT_79545 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 165/207 (79%), Gaps = 6/207 (2%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + L K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYL+DRTVRLQ
Sbjct: 6 AYTNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLDDRTVRLQ 65
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYD+ S +SF KW+D+VR ERG DVIIVLVG
Sbjct: 66 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITSLKSFQQCRKWVDDVRGERGQDVIIVLVG 125
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL EKR+VS++ GE +S++L +F+ETSAK G N+K LF+KIA ALPGME
Sbjct: 126 NKTDLGEKREVSVQMGEEESKKLGCLFVETSAKVGHNVKGLFKKIAQALPGMEGEGVQGA 185
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N + +S+ GC+C
Sbjct: 186 ANTIDVNV-----NPQKPESE-GGCNC 206
>gi|110591381|pdb|2FE4|A Chain A, The Crystal Structure Of Human Neuronal Rab6b In Its
Inactive Gdp-Bound Form
gi|110591397|pdb|2FFQ|A Chain A, The Crystal Structure Of Human Neuronal Rab6b In Its
Active Gtpgs-Bound Form
gi|166235341|pdb|2E9S|A Chain A, Human Neuronal Rab6b In Three Intermediate Forms
gi|166235342|pdb|2E9S|B Chain B, Human Neuronal Rab6b In Three Intermediate Forms
gi|166235343|pdb|2E9S|C Chain C, Human Neuronal Rab6b In Three Intermediate Forms
Length = 171
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/163 (80%), Positives = 152/163 (93%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG
Sbjct: 1 GKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 60
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL
Sbjct: 61 QERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLA 120
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
+KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+AL
Sbjct: 121 DKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 163
>gi|223997454|ref|XP_002288400.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220975508|gb|EED93836.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 202
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/186 (75%), Positives = 159/186 (85%), Gaps = 8/186 (4%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
+AP LAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRL
Sbjct: 24 LAP---LAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRL 80
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVVVYDV +R SFLNTSKW+++VR ERG+DV+I LV
Sbjct: 81 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRASFLNTSKWVEDVRAERGNDVVICLV 140
Query: 121 GNKTDLV-EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
GNKTDL +KRQVS EEGE K+ + ++F+E SAKAG+N+K LFRK+A +LPG + +
Sbjct: 141 GNKTDLGNDKRQVSTEEGEEKASKDGLLFMECSAKAGYNVKSLFRKLATSLPGKQ----S 196
Query: 180 KQEEMV 185
KQE V
Sbjct: 197 KQEHTV 202
>gi|58261886|ref|XP_568353.1| hypothetical protein CNM00590 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57230526|gb|AAW46836.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 213
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 164/204 (80%), Gaps = 7/204 (3%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 17 TPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 76
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TA ERFRSLIPSYIRDSSVAV+VYD+ +R SF NTSKW+D+VR ERG DVIIVLVGNKT
Sbjct: 77 TALFERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLVGNKT 136
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ E+ + +++EL VM IETSAKAG N+K LF+KIA ALPG S K
Sbjct: 137 DLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGG---SEAKDNGT 193
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+++ S + Q Q+SGCSC
Sbjct: 194 TKIDVSS----SPQEVPQASGCSC 213
>gi|116875763|ref|NP_115520.2| ras-related protein Rab-6C [Homo sapiens]
gi|166214970|sp|Q9H0N0.2|RAB6C_HUMAN RecName: Full=Ras-related protein Rab-6C; AltName: Full=Rab6-like
protein WTH3
gi|62822497|gb|AAY15045.1| unknown [Homo sapiens]
gi|119615768|gb|EAW95362.1| RAB6C, member RAS oncogene family [Homo sapiens]
gi|119632105|gb|EAX11700.1| hCG2014445 [Homo sapiens]
Length = 254
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 163/205 (79%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+ITRF YD FDNTYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+EEGE K++ LNV FIET AKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
D+ L Q Q+ S GCSC
Sbjct: 189 SDIKLEK-----PQEQTVSEGGCSC 208
>gi|300120200|emb|CBK19754.2| unnamed protein product [Blastocystis hominis]
Length = 219
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 164/210 (78%), Gaps = 7/210 (3%)
Query: 2 AP-VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
AP ++ L KYKLVFLGD VGKTSIITRFMYD FD++YQATIGIDFLSKTMYL+DRTVRL
Sbjct: 14 APRMTPLEKYKLVFLGDPGVGKTSIITRFMYDTFDSSYQATIGIDFLSKTMYLDDRTVRL 73
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYD+ +R SF NT KW+ +VR ERG DV+IVLV
Sbjct: 74 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDLTNRTSFENTRKWLSDVRVERGDDVVIVLV 133
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL + RQVS EGEA ++ELNV+FIETSAK FN+ LFRK+A LPG
Sbjct: 134 GNKTDLSDSRQVSTNEGEALAKELNVLFIETSAKCNFNVTALFRKVATTLPGEGKPKKEG 193
Query: 181 QEE--MVDVNLRSTTGNASQSQSQSSGCSC 208
+ E + +N+ S +++++GCSC
Sbjct: 194 ESENKFIKINVES----KGTDEAKNAGCSC 219
>gi|327289792|ref|XP_003229608.1| PREDICTED: ras-related protein Rab-6A-like, partial [Anolis
carolinensis]
Length = 167
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 131/165 (79%), Positives = 150/165 (90%)
Query: 19 SVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
+VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSY
Sbjct: 3 TVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 62
Query: 79 IRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGE 138
IRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE
Sbjct: 63 IRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGE 122
Query: 139 AKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+
Sbjct: 123 RKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSRED 167
>gi|117938299|ref|NP_001071105.1| RAB6C-like [Homo sapiens]
gi|62702327|gb|AAX93251.1| unknown [Homo sapiens]
gi|63145796|gb|AAY33873.1| WTH3DI [Homo sapiens]
gi|112292965|dbj|BAF02860.1| Rab6C [Homo sapiens]
gi|151555103|gb|AAI48668.1| RAB6C-like [synthetic construct]
gi|157169764|gb|AAI53206.1| RAB6C-like [synthetic construct]
Length = 254
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 162/205 (79%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+ITRF YD FDNTYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AVVVYD+ + SF T+KWID+VRTE GSDVII LVGNKT
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ LNV FIET AKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
D+ L Q Q+ S GCSC
Sbjct: 189 SDIKLEK-----PQEQTVSEGGCSC 208
>gi|396465538|ref|XP_003837377.1| similar to ras-related protein Rab-6A [Leptosphaeria maculans JN3]
gi|312213935|emb|CBX93937.1| similar to ras-related protein Rab-6A [Leptosphaeria maculans JN3]
Length = 210
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 161/200 (80%), Gaps = 19/200 (9%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ ++++F NT KW+D+VR+ER +DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRSERSNDVIIVLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ +GE ++++ N+MFIETSAK G N+K LF++IA ALPGME
Sbjct: 128 DLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGME---------- 177
Query: 185 VDVNLRSTTGNASQSQSQSS 204
G Q QSQ+S
Sbjct: 178 ---------GEGQQGQSQTS 188
>gi|23820936|gb|AAN39685.1|AF309646_1 Rab6-like protein WTH3 [Homo sapiens]
gi|12052973|emb|CAB66661.1| hypothetical protein [Homo sapiens]
gi|49065364|emb|CAG38500.1| RAB6C [Homo sapiens]
gi|111306488|gb|AAI21000.1| RAB6C, member RAS oncogene family [Homo sapiens]
gi|117644696|emb|CAL37813.1| hypothetical protein [synthetic construct]
gi|117645978|emb|CAL38456.1| hypothetical protein [synthetic construct]
gi|117646278|emb|CAL38606.1| hypothetical protein [synthetic construct]
gi|117646424|emb|CAL38679.1| hypothetical protein [synthetic construct]
gi|208965414|dbj|BAG72721.1| RAB6C, member RAS oncogene family [synthetic construct]
Length = 254
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 162/205 (79%), Gaps = 6/205 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+ITRF YD FDNTYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVS+EEGE K++ LNV FIET AK G+N+K LFR++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSVEEGERKAKGLNVTFIETRAKTGYNVKQLFRRVAAALPGMESTQDGSREDM 188
Query: 185 VDVNLRSTTGNASQSQSQS-SGCSC 208
D+ L Q Q+ S GCSC
Sbjct: 189 SDIKLEK-----PQEQTVSEGGCSC 208
>gi|48766845|gb|AAT46563.1| Rab [Marsupenaeus japonicus]
Length = 214
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 147/159 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 163
DL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LF
Sbjct: 127 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLF 165
>gi|401411219|ref|XP_003885057.1| RAB5C, member RAS oncogene family, related, partial [Neospora
caninum Liverpool]
gi|325119476|emb|CBZ55029.1| RAB5C, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 185
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/167 (77%), Positives = 151/167 (90%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A V+ L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQATIGIDFLSKT+YLEDRTVRLQ
Sbjct: 4 ATVAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSS AVVVYD+ +R SFLNT+KWI++VR ERG+DVII LVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVG 123
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAA 168
NKTDL ++RQVS EEG K++E ++MF+ETSAKAG+NIK LFRK+++
Sbjct: 124 NKTDLADRRQVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLSS 170
>gi|302892455|ref|XP_003045109.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726034|gb|EEU39396.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 166/206 (80%), Gaps = 14/206 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 125 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGTDAAAQASS 184
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV T NA QSQ GC+C
Sbjct: 185 QMIDV----KTNNAQQSQ---EGCAC 203
>gi|164655602|ref|XP_001728930.1| hypothetical protein MGL_3924 [Malassezia globosa CBS 7966]
gi|159102818|gb|EDP41716.1| hypothetical protein MGL_3924 [Malassezia globosa CBS 7966]
Length = 223
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 153/169 (90%), Gaps = 1/169 (0%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SA+ K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+DRTVRLQLWD
Sbjct: 12 SAMRKFKLVFLGEQSVGKTSLITRFMYDTFDGNYQATIGIDFLSKTMYLDDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA+VVYDV +R+SF +TSKW+++VR ERG++VII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAIVVYDVTNRESFKSTSKWVEDVRAERGNEVIIALVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSREL-NVMFIETSAKAGFNIKPLFRKIAAALPG 172
DL +KR+VS EEGE +++E NVMF+ETSAKAG N+ PLF+KIA ALPG
Sbjct: 132 DLNDKREVSTEEGEQRAKEYNNVMFLETSAKAGHNVMPLFKKIAQALPG 180
>gi|46111195|ref|XP_382655.1| hypothetical protein FG02479.1 [Gibberella zeae PH-1]
Length = 203
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 165/206 (80%), Gaps = 14/206 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL EKR+V+ ++GE ++++ N+MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 125 DLNEKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGSDAAAQASN 184
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV T N QSQ GC+C
Sbjct: 185 QMIDV----KTNNTQQSQ---EGCAC 203
>gi|321264959|ref|XP_003197196.1| GTPase, Ras-like GTP binding protein; Ypt6p [Cryptococcus gattii
WM276]
gi|317463675|gb|ADV25409.1| GTPase, Ras-like GTP binding protein, putative; Ypt6p [Cryptococcus
gattii WM276]
Length = 211
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 163/204 (79%), Gaps = 9/204 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 17 TPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 76
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
T ERFRSLIPSYIRDSSVAV+VYD+ +R SF NTSKW+D+VR ERG DVIIVLVGNKT
Sbjct: 77 TG--ERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLVGNKT 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQV+ E+ + +++EL VM IETSAKAG N+K LF+KIA ALPG + +
Sbjct: 135 DLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGGNEAKDSGATK- 193
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV+ + Q Q+SGCSC
Sbjct: 194 IDVSA------SPQEVPQASGCSC 211
>gi|402225252|gb|EJU05313.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 161/202 (79%), Gaps = 3/202 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 16 LKRTKIVLLGDQSVGKTSLITRFMYDTFDQTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVA+VV+D+ +R SFL+T+KWID+VR+ERG DVIIVLVGNK DL
Sbjct: 76 GQERFRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGGDVIIVLVGNKADL 135
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
RQV+ EE + KS EL+++++ETSAKAG N+K LF+KIA LPG E +E
Sbjct: 136 SNDRQVTQEEAQQKSTELDIIYMETSAKAGHNVKTLFKKIAMLLPGNEKEGEQAKEGNQK 195
Query: 187 VNLRSTTGNASQSQSQSSGCSC 208
+++ S N + Q+S C+C
Sbjct: 196 IDVTSPAKNET---PQASNCAC 214
>gi|403413298|emb|CCL99998.1| predicted protein [Fibroporia radiculosa]
Length = 231
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 153/179 (85%), Gaps = 6/179 (3%)
Query: 2 APVSA------LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED 55
+PVSA L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSK MYLED
Sbjct: 4 SPVSADFSSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLED 63
Query: 56 RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDV 115
RTVRLQLWDTAGQER+RSLIPSYIRD SVA+VV+D+ +RQSFL+TSKWID+VR+ERGSDV
Sbjct: 64 RTVRLQLWDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGSDV 123
Query: 116 IIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
IIVLVGNK DL +KRQV +EE K+ +L +MF+ETSAKAG N+K LF+KIA L GME
Sbjct: 124 IIVLVGNKADLSDKRQVMLEEANTKATQLEIMFMETSAKAGHNVKSLFKKIAMELVGME 182
>gi|148684516|gb|EDL16463.1| RAB6, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149068774|gb|EDM18326.1| rCG39700, isoform CRA_c [Rattus norvegicus]
Length = 175
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 150/179 (83%), Gaps = 4/179 (2%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L + GCSC
Sbjct: 121 ETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEK----PQEQPVNEGGCSC 175
>gi|355714968|gb|AES05180.1| RAB6A, member RAS oncoprotein family [Mustela putorius furo]
Length = 164
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 146/156 (93%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIK 160
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVK 164
>gi|344030204|ref|NP_001230648.1| ras-related protein Rab-6A isoform c [Homo sapiens]
gi|402894607|ref|XP_003910445.1| PREDICTED: ras-related protein Rab-6A [Papio anubis]
gi|410972689|ref|XP_003992790.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Felis catus]
gi|441645568|ref|XP_004090672.1| PREDICTED: ras-related protein Rab-6A [Nomascus leucogenys]
Length = 175
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 151/180 (83%), Gaps = 6/180 (3%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS+ AVVVY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQS-SGCSC 208
ETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L Q Q S GCSC
Sbjct: 121 ETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEK-----PQEQPVSEGGCSC 175
>gi|351708549|gb|EHB11468.1| Ras-related protein Rab-6B, partial [Heterocephalus glaber]
Length = 174
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/166 (78%), Positives = 151/166 (90%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
DL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K + ++A AL
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQVRARLALAL 174
>gi|126644156|ref|XP_001388214.1| RAB6 protein [Cryptosporidium parvum Iowa II]
gi|126117287|gb|EAZ51387.1| RAB6 protein, putative [Cryptosporidium parvum Iowa II]
Length = 219
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 126/178 (70%), Positives = 152/178 (85%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ ++K+K VFLG+QSVGKTSIITRFMYD FDN YQATIGIDFLSKT+YLEDRT+RLQLWD
Sbjct: 8 NQISKFKFVFLGEQSVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTIRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ +R +FLNT+KWI++VR ERG DVII L+GNK
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNRSTFLNTTKWIEDVRNERGKDVIISLIGNKA 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
DL ++RQV EE E ++E N+MFIETSAK G+NIK LF+K+A+ LP ++ + K E
Sbjct: 128 DLEDRRQVKYEEAEKLAQENNIMFIETSAKNGYNIKSLFKKLASTLPNLDYIQEGKNE 185
>gi|156049367|ref|XP_001590650.1| hypothetical protein SS1G_08390 [Sclerotinia sclerotiorum 1980]
gi|154692789|gb|EDN92527.1| hypothetical protein SS1G_08390 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 186
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 133/191 (69%), Positives = 157/191 (82%), Gaps = 8/191 (4%)
Query: 19 SVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
SVGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 3 SVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 62
Query: 79 IRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGE 138
IRDSSVAVVVYD+++R+SF NT KW+D+VR ERG+DVIIVLVGNKTDL +KR+V+ EGE
Sbjct: 63 IRDSSVAVVVYDISNRKSFQNTRKWVDDVRGERGNDVIIVLVGNKTDLNDKREVTTSEGE 122
Query: 139 AKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQEEMVDVNLRSTTGNAS 197
++++ N+MFIETSAK G N+K LFR+IA ALPGME ++ +M+DVN+ T N
Sbjct: 123 EEAKKNNLMFIETSAKLGHNVKTLFRRIAQALPGMEGADNAATPNQMIDVNVNPTPVN-- 180
Query: 198 QSQSQSSGCSC 208
GC+C
Sbjct: 181 -----QEGCAC 186
>gi|226478096|emb|CAX72741.1| RAB family [Schistosoma japonicum]
gi|226478548|emb|CAX72769.1| RAB family [Schistosoma japonicum]
gi|257206356|emb|CAX82829.1| RAB family [Schistosoma japonicum]
gi|257206638|emb|CAX82947.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 163/204 (79%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD F+N YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + +SF TSKWID+VR ERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR V+ EEGE + +LNVMFIETSAKAG+N+K LFR+IA L E + + ++
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
++V L + + +Q C C
Sbjct: 185 IEVKLHDASKDTDFNQRV---CWC 205
>gi|259483929|tpe|CBF79720.1| TPA: hypothetical protein similar to small GTP-binding protein
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 184
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 151/169 (89%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALP +
Sbjct: 132 DLSDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPDL 180
>gi|221043662|dbj|BAH13508.1| unnamed protein product [Homo sapiens]
Length = 175
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 150/180 (83%), Gaps = 6/180 (3%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS+ AVVVY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQS-SGCSC 208
ETSAKAG+N+K LFR++AAALPGME+ +E+M D+ L Q Q S GCSC
Sbjct: 121 ETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMTDIKLEK-----PQEQPVSEGGCSC 175
>gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein [Plasmodium berghei]
gi|6759653|gb|AAF27979.1|AF093827_1 GTP binding protein [Plasmodium berghei]
Length = 207
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 160/204 (78%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL + R+V+ EEG K++E N MF ETSAKAG NIK LF+KIAA LP +E ++ + +
Sbjct: 127 DLADLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLEN-NNNHEANV 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ L + N ++ S C C
Sbjct: 186 VDIQLTNDMNN--NEKNMLSKCLC 207
>gi|82596931|ref|XP_726467.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii]
Length = 282
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 160/204 (78%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 82 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 141
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG DVIIVLVGNKT
Sbjct: 142 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGNKT 201
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL + R+V+ EEG K++E N MF ETSAKAG NIK LF+KIAA LP +E ++ + +
Sbjct: 202 DLADLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLEN-NNNHEANV 260
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ L + N ++ S C C
Sbjct: 261 VDIQLTNDMNN--NEKNILSKCLC 282
>gi|431838418|gb|ELK00350.1| Ras-related protein Rab-6A [Pteropus alecto]
Length = 171
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/158 (81%), Positives = 146/158 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPL 162
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K +
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQV 166
>gi|449683751|ref|XP_002159099.2| PREDICTED: ras-related protein Rab-6A-like [Hydra magnipapillata]
Length = 176
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 151/179 (84%), Gaps = 3/179 (1%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF TSKWID+VR ERGSDVII+LVGNKTDL EKRQV+ E GEAK++ELNVMFI
Sbjct: 61 DITNVNSFQQTSKWIDDVRVERGSDVIIMLVGNKTDLAEKRQVATESGEAKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAG N+K LFRK+A+ALPGME + K+E++++V L+ + Q+ + GC C
Sbjct: 121 ETSAKAGHNVKQLFRKVASALPGMEN-TPDKKEDLIEVTLKDNPQD--QNNQEGRGCPC 176
>gi|56757515|gb|AAW26922.1| SJCHGC02777 protein [Schistosoma japonicum]
Length = 205
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 163/204 (79%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD F+N YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + +SF TSKWID+VR ERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR V+ EEGE + +LNVMFIETSAKAG+N+K LFR+IA L E + + ++
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
++V L + + +Q C C
Sbjct: 185 MEVKLHDASKDTDFNQRV---CWC 205
>gi|164429212|ref|XP_961894.2| GTP-binding protein ryh1 [Neurospora crassa OR74A]
gi|157072984|gb|EAA32658.2| GTP-binding protein ryh1 [Neurospora crassa OR74A]
Length = 218
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 160/209 (76%), Gaps = 5/209 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSK-----TMYLEDRTVR 59
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK TMYLEDRTVR
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKACSTPTMYLEDRTVR 69
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVL
Sbjct: 70 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVL 129
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDL +KR+V+ +GE ++R N+MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 130 VGNKTDLNDKREVTTAQGEEEARRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTGGE 189
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ +S+ GC+C
Sbjct: 190 GAGGAGTGAAATRIDVSSKETVAQEGCAC 218
>gi|336471794|gb|EGO59955.1| GTP-binding protein ryh1 [Neurospora tetrasperma FGSC 2508]
gi|350292910|gb|EGZ74105.1| GTP-binding protein ryh1 [Neurospora tetrasperma FGSC 2509]
Length = 218
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 160/209 (76%), Gaps = 5/209 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSK-----TMYLEDRTVR 59
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK TMYLEDRTVR
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKACSIPTMYLEDRTVR 69
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVL
Sbjct: 70 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVL 129
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDL +KR+V+ +GE ++R N+MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 130 VGNKTDLNDKREVTTAQGEEEARRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTGGE 189
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ +S+ GC+C
Sbjct: 190 GAGGAGTGAAATRIDVSSKETVAQEGCAC 218
>gi|226478016|emb|CAX72701.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 162/204 (79%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG QSVGKTS+ITRFMYD F+N YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGGQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + +SF TSKWID+VR ERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR V+ EEGE + +LNVMFIETSAKAG+N+K LFR+IA L E + + ++
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
++V L + + +Q C C
Sbjct: 185 IEVKLHDASKDTDFNQRV---CWC 205
>gi|226478066|emb|CAX72726.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 163/204 (79%), Gaps = 4/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD F+N YQATIGI+FLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGINFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + +SF TSKWID+VR ERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR V+ EEGE + +LNVMFIETSAKAG+N+K LFR+IA L E + + ++
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
++V L + + +Q C C
Sbjct: 185 IEVKLHDASKDTDFNQRV---CWC 205
>gi|225680073|gb|EEH18357.1| GTP-binding protein ryh1 [Paracoccidioides brasiliensis Pb03]
Length = 205
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 164/204 (80%), Gaps = 10/204 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK DRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKV----DRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL ++R+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALPGM+ + +M
Sbjct: 128 DLNDRREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGANQM 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DVN+ N +Q S + GC+C
Sbjct: 188 IDVNI-----NPTQPVS-NDGCAC 205
>gi|348515489|ref|XP_003445272.1| PREDICTED: ras-related protein Rab-6A-like isoform 3 [Oreochromis
niloticus]
Length = 179
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/156 (82%), Positives = 144/156 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIK 160
DL +KRQVS+E E K+RELNVM+IETSAKAG+N+K
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVK 167
>gi|389583987|dbj|GAB66721.1| small GTPase Rab6 [Plasmodium cynomolgi strain B]
Length = 207
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 160/204 (78%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG DVII LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL + R+V+ EEG K++E N MF ETSAKAG NIK LF+KIAA LP ++ S++ +
Sbjct: 127 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLDN-SNSNDANV 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ L T A+ ++ S C C
Sbjct: 186 VDIQL--TNNAAANEKNMLSKCMC 207
>gi|443914817|gb|ELU36556.1| ryh1 [Rhizoctonia solani AG-1 IA]
Length = 189
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 127/170 (74%), Positives = 149/170 (87%), Gaps = 5/170 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L + K+V LGDQSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYL+DRTVRLQLWD
Sbjct: 13 APLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLDDRTVRLQLWD 72
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA+VVYD+ S ++KWID+VR+ERG+DVIIVLVGNK
Sbjct: 73 TAGQERFRSLIPSYIRDSSVAIVVYDITSE-----SAKWIDDVRSERGTDVIIVLVGNKA 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KRQV++EE ++ ELN+MF+ETSAKAG N+K LF+KIA +LPGME
Sbjct: 128 DLSDKRQVTMEEATQRANELNIMFMETSAKAGHNVKTLFKKIAMSLPGME 177
>gi|56757031|gb|AAW26687.1| SJCHGC02776 protein [Schistosoma japonicum]
gi|257206208|emb|CAX82755.1| RAB family [Schistosoma japonicum]
Length = 203
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 163/202 (80%), Gaps = 4/202 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD F+N YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ + +SF TSKWID+VR ERGSDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR V+ EEGE + +LNVMFIETSAKAG+N+K LFR+IA L E + + ++
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDY 184
Query: 185 VDVNLRSTTGNASQSQSQSSGC 206
+++ ++Q ++ GC
Sbjct: 185 IEL---KPIEPPQENQWKTCGC 203
>gi|157817539|ref|NP_001102245.1| ras-related protein Rab-6B [Rattus norvegicus]
gi|194221614|ref|XP_001496020.2| PREDICTED: ras-related protein Rab-6B-like [Equus caballus]
gi|345789199|ref|XP_853481.2| PREDICTED: ras-related protein Rab-6B [Canis lupus familiaris]
gi|149018752|gb|EDL77393.1| RAB6B, member RAS oncogene family (predicted) [Rattus norvegicus]
Length = 175
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/179 (70%), Positives = 149/179 (83%), Gaps = 4/179 (2%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE +++EL+VMFI
Sbjct: 61 DITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAK G+N+K LFR++A+ALPGME + +E M+D+ L + + GCSC
Sbjct: 121 ETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL----DKPQEPPASEGGCSC 175
>gi|440472892|gb|ELQ41722.1| GTP-binding protein ryh1 [Magnaporthe oryzae Y34]
gi|440483954|gb|ELQ64166.1| GTP-binding protein ryh1 [Magnaporthe oryzae P131]
Length = 216
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 165/213 (77%), Gaps = 16/213 (7%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKT-------MYLEDRT 57
+ L K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK + T
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDGMYQATIGIDFLSKASKPPAHPHRSSEST 70
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVII
Sbjct: 71 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVII 130
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
VLVGNKTDL +KR+V+ ++GE ++++ N+MFIETSAK G N++PLF++IA +LPGME
Sbjct: 131 VLVGNKTDLNDKREVTTQQGEEEAKKNNLMFIETSAKVGHNVQPLFKRIARSLPGMEGTE 190
Query: 178 STKQ--EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ +Q +M+DV +T Q+Q GC+C
Sbjct: 191 AAQQAASQMIDVKTNNT-------QAQQEGCAC 216
>gi|209880834|ref|XP_002141856.1| Ras family protein Rab-6A [Cryptosporidium muris RN66]
gi|209557462|gb|EEA07507.1| Ras family protein Rab-6A, putative [Cryptosporidium muris RN66]
Length = 220
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 163/213 (76%), Gaps = 9/213 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+K VFLG+QSVGKTSIITRFMYD FDN YQATIGIDFLSKT+YLEDRT+RLQLWD
Sbjct: 8 NQLNKFKFVFLGEQSVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTIRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+ +R ++LNT+KWI++VR ERG DVII LVGNK
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNRSTYLNTTKWIEDVRNERGKDVIIALVGNKA 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET---LSSTKQ 181
DL +KRQV +EGE + + +++FIETSAK G+NIK +FRK+A+ LP +E+ S+TK
Sbjct: 128 DLDDKRQVRYDEGEKLANDNDIIFIETSAKNGYNIKSIFRKLASTLPTLESKLDHSNTKS 187
Query: 182 EEMVDVNLRSTTGNA------SQSQSQSSGCSC 208
+ N ST N S+ GC C
Sbjct: 188 SSNANDNSNSTGKNVELRLGDENSRFNYKGCIC 220
>gi|213515204|ref|NP_001133402.1| Ras-related protein Rab-6C [Salmo salar]
gi|209153591|gb|ACI33170.1| Ras-related protein Rab-6C [Salmo salar]
Length = 175
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/179 (70%), Positives = 148/179 (82%), Gaps = 4/179 (2%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS++AVVVY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTIAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++ EEGE +++ELNVMFI
Sbjct: 61 DITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITTEEGEQRAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAK G+N+K LFR++AAALPGM++ +E+M+D+ L A S CSC
Sbjct: 121 ETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDMIDIKLEKPPEMA----VTESSCSC 175
>gi|258597414|ref|XP_001348128.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
gi|254832720|gb|AAN36041.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 159/204 (77%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG DVII LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL + R+V+ EEG K++E N MF ETSAKAG NIK LF+KIA+ LP ++ ++ + +
Sbjct: 127 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNLDN-TNNNEANV 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ L T + ++ S C C
Sbjct: 186 VDIQL--TNNSNKNDKNMLSKCLC 207
>gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum]
Length = 240
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 159/204 (77%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 40 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 99
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG DVII LVGNKT
Sbjct: 100 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 159
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL + R+V+ EEG K++E N MF ETSAKAG NIK LF+KIA+ LP ++ ++ + +
Sbjct: 160 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNLDN-TNNNEANV 218
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ L T + ++ S C C
Sbjct: 219 VDIQL--TNNSNKNDKNMLSKCLC 240
>gi|348501272|ref|XP_003438194.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oreochromis
niloticus]
Length = 185
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 153/204 (75%), Gaps = 27/204 (13%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVV RGSDVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVV-----------------------RGSDVIIMLVGNKT 105
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL EKRQ++IEEGE +++ELNVMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 106 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEGM 165
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L ++ GCSC
Sbjct: 166 IDIKL----DKPAEPAVPEGGCSC 185
>gi|340521862|gb|EGR52096.1| Ras-like GTP-binding protein [Trichoderma reesei QM6a]
Length = 203
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/206 (64%), Positives = 160/206 (77%), Gaps = 14/206 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE +++ + F+ETSAK G N++ LF++IA ALPGME + Q
Sbjct: 125 DLNDKREVTTQQGEEEAKRQGLRFVETSAKLGHNVQNLFKRIAQALPGMEGSDAAAQATN 184
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV +T Q GCSC
Sbjct: 185 QMIDVRTNTT-------QPPQEGCSC 203
>gi|1628428|emb|CAA63555.1| GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 158/204 (77%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG DVII LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 126
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL + R+V+ EEG K++E N MF ETSAKAG NIK LF+K A+ LP ++ ++ + +
Sbjct: 127 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKLPNLDN-TNNNEANV 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
VD+ L T + ++ S C C
Sbjct: 186 VDIQL--TNNSNKNDKNMLSKCLC 207
>gi|154286400|ref|XP_001543995.1| GTP-binding protein ryh1 [Ajellomyces capsulatus NAm1]
gi|150407636|gb|EDN03177.1| GTP-binding protein ryh1 [Ajellomyces capsulatus NAm1]
Length = 232
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 158/204 (77%), Gaps = 18/204 (8%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSK--------------- 49
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKVGSQPSSNRPPRLPF 71
Query: 50 ---TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDE 106
TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+
Sbjct: 72 IMGTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDD 131
Query: 107 VRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
VR ERG+DVIIVLVGNKTDL ++R+V+ +GE ++++ +MFIETSAK G N+K LFR+I
Sbjct: 132 VRGERGNDVIIVLVGNKTDLNDRREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRI 191
Query: 167 AAALPGMETLSSTKQEEMVDVNLR 190
A ALPGM+ S E+ D + +
Sbjct: 192 AQALPGMDDESGRACEQRWDAHAK 215
>gi|384493318|gb|EIE83809.1| GTP-binding protein Ryh1 [Rhizopus delemar RA 99-880]
Length = 203
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 159/205 (77%), Gaps = 10/205 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QS K + Y + ATIGIDFLSKTMYL+DRT+RLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSGNKQNWKNIAHYKIY-----ATIGIDFLSKTMYLDDRTIRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSV VVVYD+ SR SFLNTSKWID+VR ERG+DVIIVLVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVCVVVYDITSRSSFLNTSKWIDDVRAERGTDVIIVLVGNKT 122
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ-EE 183
DL +KRQV++EEGE K+++ N+MFIETSAKAG+NIK +FRKI ALPGME + Q E+
Sbjct: 123 DLNDKRQVTVEEGEKKAKDYNIMFIETSAKAGYNIKAMFRKIGHALPGMENNAEDGQKEQ 182
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+ V+L T S ++SGC+C
Sbjct: 183 LTKVDLTDT----STRNEEASGCAC 203
>gi|358378155|gb|EHK15837.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 159/206 (77%), Gaps = 14/206 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++GE +++ + F+ETSAK G N++ LF++IA ALPGME + Q
Sbjct: 125 DLNDKREVTTQQGEEEAKRQGLRFVETSAKLGHNVQNLFKRIAQALPGMEGSDAAAQATN 184
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV +T GCSC
Sbjct: 185 QMIDVRTNTTA-------PPQEGCSC 203
>gi|290462723|gb|ADD24409.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
Length = 160
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/152 (83%), Positives = 138/152 (90%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD + SF TSKWID+VRTERGSD II+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDAIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAG 156
DL EKRQV E+GE K++ELNVMFIETSAKAG
Sbjct: 129 DLSEKRQVPTEDGERKAKELNVMFIETSAKAG 160
>gi|256085306|ref|XP_002578863.1| rab6 [Schistosoma mansoni]
gi|350645823|emb|CCD59585.1| rab6, putative [Schistosoma mansoni]
Length = 203
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/166 (75%), Positives = 145/166 (87%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMY+ FDN YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLQKFKLVFLGEQSVGKTSLITRFMYETFDNLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSS AVVVYD+ + SF SKW+D+VR ERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSAAVVVYDICNAGSFHQASKWVDDVRNERGGDVIIILVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
DL +KR+V+ EEGE +++L VMFIETSAKAG+N+K LFR+IA L
Sbjct: 126 DLSDKRKVTTEEGELLAKKLEVMFIETSAKAGYNVKVLFRRIATEL 171
>gi|452825788|gb|EME32783.1| Rab family, other [Galdieria sulphuraria]
Length = 178
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYDKFDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
DV +R SFL+ ++W++EV+ ERG DV++VLVGNKTD E+RQVS EEGEAK++E +MF+
Sbjct: 61 DVTNRASFLSVNRWLEEVKNERGEDVVLVLVGNKTDQAERRQVSTEEGEAKAKEYGIMFM 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAGFN+K LFRKIA+ALPGME++ +MVD+ L +T ++S + C C
Sbjct: 121 ETSAKAGFNVKALFRKIASALPGMESVQEPSHMQMVDIKLNTTNTETTES-NHVQRCRC 178
>gi|47550805|ref|NP_999930.1| RAB6A, member RAS oncogene family [Danio rerio]
gi|27881933|gb|AAH44491.1| RAB6A, member RAS oncogene family [Danio rerio]
Length = 181
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 151/204 (74%), Gaps = 31/204 (15%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVV VII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVV---------------------------VIIMLVGNKT 101
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 102 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 161
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 162 IDIKLE----KPPEQPVSEGGCSC 181
>gi|167524248|ref|XP_001746460.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775222|gb|EDQ88847.1| predicted protein [Monosiga brevicollis MX1]
Length = 214
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 9/211 (4%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYD---KFDNTY---QATIGIDFLSKTMYLEDRT 57
+ L K+KLVFLG+QS + + D + Y QATIGIDFLSKTMYLEDRT
Sbjct: 7 ANPLRKFKLVFLGEQSGTLSPCKAQSEPDLPAPHSSLYAWTQATIGIDFLSKTMYLEDRT 66
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+ +R SF TSKWID+VR ERGSDV+I
Sbjct: 67 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRNSFQQTSKWIDDVRAERGSDVVI 126
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL +KR+VS+EEGEAK++ELNVMFIETSAKAG N+K LF+++AAALPGME+ +
Sbjct: 127 MLVGNKTDLNDKREVSLEEGEAKAKELNVMFIETSAKAGHNVKQLFKRVAAALPGMESTA 186
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+E + ++ T + Q +S CSC
Sbjct: 187 EANKETEAPLTVKIT---ETSDQQPASACSC 214
>gi|336265072|ref|XP_003347310.1| hypothetical protein SMAC_07167 [Sordaria macrospora k-hell]
gi|380088515|emb|CCC13542.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 232
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/185 (69%), Positives = 149/185 (80%), Gaps = 18/185 (9%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSK--------------- 49
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDN YQATIGIDFLSK
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKACSTPLDRAAPEGHN 69
Query: 50 ---TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDE 106
TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+
Sbjct: 70 GRRTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDD 129
Query: 107 VRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
VR ERG+DVIIVLVGNKTDL +KR+V+ +GE ++R N+MF+ETSAK G N+K LF++I
Sbjct: 130 VRAERGNDVIIVLVGNKTDLNDKREVTTAQGEEEARRNNLMFVETSAKLGHNVKTLFKRI 189
Query: 167 AAALP 171
A ALP
Sbjct: 190 AQALP 194
>gi|388583972|gb|EIM24273.1| GTP-binding protein ryh1 [Wallemia sebi CBS 633.66]
Length = 208
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 157/202 (77%), Gaps = 9/202 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYL+DRT+RLQLWDTA
Sbjct: 16 LKKFKLVFLGEQSVGKTSLITRFMYDTFDKTYQATIGIDFLSKTMYLDDRTIRLQLWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAVVVYDV+++ S+ NTSKWI+EV+ ERG DVIIVLVGNK DL
Sbjct: 76 GQERFRSLIPSYIRDSSVAVVVYDVSNKNSYDNTSKWIEEVKQERGDDVIIVLVGNKVDL 135
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
EK +V+ ++ + ++FIETSAK+GFN+K LF++IA ALP E +S +
Sbjct: 136 SEK-EVNNDQVKEYCDNNGILFIETSAKSGFNVKQLFKRIALALPASEQDNSQNDNVKIQ 194
Query: 187 VNLRSTTGNASQSQSQSSGCSC 208
V+ +Q Q S C+C
Sbjct: 195 VD--------NQQADQQSSCNC 208
>gi|91089681|ref|XP_974614.1| PREDICTED: similar to Rab-protein 6 CG6601-PA [Tribolium castaneum]
gi|270012633|gb|EFA09081.1| hypothetical protein TcasGA2_TC006800 [Tribolium castaneum]
Length = 210
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/184 (68%), Positives = 150/184 (81%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYKLVFLG+QSVGKTSIIT+FMYD FD YQAT+GIDFLSKTMYL D+TVRLQLWDT
Sbjct: 13 SLQKYKLVFLGEQSVGKTSIITKFMYDSFDTAYQATVGIDFLSKTMYLTDKTVRLQLWDT 72
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIP+YIRDSSVAVVV+DV + ++F T+KWI++VR ERG VI+ LVGNK D
Sbjct: 73 AGQERFRSLIPAYIRDSSVAVVVFDVTNIETFHQTTKWINDVRMERGDSVIVFLVGNKVD 132
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L + RQVSIEEGE K++ELNV F+ETSAK G NIK LF++I +L E S E+
Sbjct: 133 LKDLRQVSIEEGEQKAKELNVTFVETSAKVGLNIKQLFKRITESLVVCEEPKSDNSSELQ 192
Query: 186 DVNL 189
+V+L
Sbjct: 193 EVSL 196
>gi|6808528|gb|AAF28422.1|AF124200_1 Rab6-like protein [Homo sapiens]
Length = 175
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/167 (73%), Positives = 143/167 (85%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+ITRF YD FDNTYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KRQVS+EEGE K++ LNV FIET AK G+N+K LFR++AAALP
Sbjct: 129 DLADKRQVSVEEGERKAKGLNVTFIETRAKTGYNVKQLFRRVAAALP 175
>gi|403337670|gb|EJY68057.1| Rab6 [Oxytricha trifallax]
gi|403366411|gb|EJY83007.1| Rab6 [Oxytricha trifallax]
Length = 235
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 147/175 (84%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYK+VFLGDQSVGKTS+I RF D FD YQATIGIDFLSKTMY++D+ VRLQLWDTAGQ
Sbjct: 13 KYKIVFLGDQSVGKTSLILRFTQDTFDGNYQATIGIDFLSKTMYVDDKMVRLQLWDTAGQ 72
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYI+DSSVAVVVYD+ ++ SF N KWID+ + RG+D++I+LVGNK D+ E
Sbjct: 73 ERFRSLIPSYIKDSSVAVVVYDITNKFSFTNVQKWIDDAKAIRGNDLLIILVGNKIDMAE 132
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
KRQV EEG+A ++EL VMFIETSAKAG NI+ LF+ +A +LPGME+ +T++ +
Sbjct: 133 KRQVGTEEGQALAKELGVMFIETSAKAGINIRQLFQNLATSLPGMESAGATRKGD 187
>gi|405123513|gb|AFR98277.1| Rab6 GTPase [Cryptococcus neoformans var. grubii H99]
Length = 210
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 160/205 (78%), Gaps = 12/205 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV-RLQLW 63
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+ +LQL
Sbjct: 17 TPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTLGKLQL- 75
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
ERFRSLIPSYIRDSSVAV+VYD+ +R SF NTSKW+D+VR ERG DVIIVLVGNK
Sbjct: 76 ---SIERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLVGNK 132
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL +KRQV+ E+ + +++EL VM IETSAKAG N+K LF+KIA ALPG S K
Sbjct: 133 TDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIALALPGG---SEAKDNG 189
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+++ + + Q Q+SGCSC
Sbjct: 190 TTKIDVSA----SPQEVPQASGCSC 210
>gi|50547479|ref|XP_501209.1| YALI0B22154p [Yarrowia lipolytica]
gi|49647075|emb|CAG83462.1| YALI0B22154p [Yarrowia lipolytica CLIB122]
Length = 200
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 159/208 (76%), Gaps = 8/208 (3%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M + K+KLV +G+QSVGKTS+ITR MYDKFD Y+ATIGI FLSK MYL DRT+RL
Sbjct: 1 MTETGQIQKFKLVIVGEQSVGKTSLITRIMYDKFDQNYEATIGIQFLSKPMYLPDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSL+P+YIRDS +A+VVY + SR+SF++ KWI++V+ ERG+ V+++LV
Sbjct: 61 QLWDTAGQERFRSLVPAYIRDSHIAIVVYAIDSRKSFVDVDKWIEDVKAERGNQVVLMLV 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNK+DL E R+V+ EEG+ K+++ + +F+ETSAKAG N+K + K+A+ LPG+ET T
Sbjct: 121 GNKSDLEESREVTTEEGQEKAKQYDALFLETSAKAGHNVKSILNKVASELPGLETALKTD 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
Q E++DVN+ ++ + CSC
Sbjct: 181 QSELIDVNIT--------NEPEQDSCSC 200
>gi|322709933|gb|EFZ01508.1| RAS small monomeric GTPase Rab6 [Metarhizium anisopliae ARSEF 23]
Length = 234
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/156 (77%), Positives = 142/156 (91%)
Query: 19 SVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
+VGKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 45 AVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 104
Query: 79 IRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGE 138
IRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKTDL EKR+V+ ++GE
Sbjct: 105 IRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKTDLNEKREVTTQQGE 164
Query: 139 AKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
++++ N+MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 165 DEAKKNNLMFMETSAKLGHNVKNLFKRIAQALPGME 200
>gi|50311935|ref|XP_455999.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645135|emb|CAG98707.1| KLLA0F20471p [Kluyveromyces lactis]
Length = 212
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQ
Sbjct: 4 AAGKTLRKYKIVFLGEQGVGKTSLITRFMYDTFDDNYQATIGIDFLSKTMYLDDKTIRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLV 120
LWDTAGQERFRSLIPSYIRDS VA+VVYDV +R+SF KWI++V+ ERG + VI+V+V
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSHVAIVVYDVTNRKSFEYIDKWIEDVKMERGEENVILVIV 123
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
GNK+DLVE+RQVS EEGE KS LN +FIETS KAGFN+K LF+KIA LP + ST
Sbjct: 124 GNKSDLVEERQVSTEEGERKSTVLNAKLFIETSTKAGFNVKTLFKKIAKLLPEFQDAQST 183
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + A+ +SQ S C
Sbjct: 184 PLDNDTNDKKPGVINLAAPDESQQSNGCC 212
>gi|441621491|ref|XP_003265428.2| PREDICTED: uncharacterized protein LOC100590410 [Nomascus
leucogenys]
Length = 474
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 146/190 (76%), Gaps = 21/190 (11%)
Query: 19 SVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
SVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 306 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 365
Query: 79 IRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGE 138
IRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE
Sbjct: 366 IRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGE 425
Query: 139 AKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQ 198
+++EL+VMFIETSAK G+N+K +E M+D+ L +
Sbjct: 426 QRAKELSVMFIETSAKTGYNVK-----------------QKSKEGMIDIKL----DKPQE 464
Query: 199 SQSQSSGCSC 208
+ GCSC
Sbjct: 465 PPASEGGCSC 474
>gi|322693940|gb|EFY85784.1| RAS small monomeric GTPase Rab6 [Metarhizium acridum CQMa 102]
Length = 490
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 141/155 (90%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
+GKTS+ITRFMYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 35 IGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 94
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKTDL EKR+V+ ++GE
Sbjct: 95 RDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKTDLNEKREVTTQQGED 154
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
++++ N+MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 155 EAKKNNLMFMETSAKLGHNVKNLFKRIAQALPGME 189
>gi|323446136|gb|EGB02421.1| hypothetical protein AURANDRAFT_35265 [Aureococcus anophagefferens]
Length = 213
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 160/214 (74%), Gaps = 9/214 (4%)
Query: 1 MAPVSA--------LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMY 52
MAP + LAKYKLVFLGDQ VGKT II RF+YD FD YQATIGIDFLSKTMY
Sbjct: 1 MAPAAGGGGRELAPLAKYKLVFLGDQGVGKTCIINRFVYDSFDKNYQATIGIDFLSKTMY 60
Query: 53 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG 112
LEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD +R SFL++SKWI +VR ERG
Sbjct: 61 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDTTARASFLDSSKWIADVRAERG 120
Query: 113 SDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
DV++VLVGNKTDL ++RQVS+EEGEAK+R ++F+ETSAKAG N+K LFR +AAALP
Sbjct: 121 DDVVVVLVGNKTDLADRRQVSVEEGEAKARAERILFVETSAKAGVNVKRLFRDVAAALP- 179
Query: 173 METLSSTKQEEMVDVNLRSTTGNASQSQSQSSGC 206
+ +VD+ L + A + C
Sbjct: 180 GAAGAPPPAAGLVDIKLTANPNGAGDDGAAKCAC 213
>gi|426369724|ref|XP_004051834.1| PREDICTED: ras-related protein Rab-6A, partial [Gorilla gorilla
gorilla]
Length = 158
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/158 (78%), Positives = 137/158 (86%)
Query: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR
Sbjct: 1 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 60
Query: 81 DSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAK 140
DS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K
Sbjct: 61 DSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERK 120
Query: 141 SRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
++ELNVMFIETSAKAG+N+K A +E L S
Sbjct: 121 AKELNVMFIETSAKAGYNVKQRIGSCHVAQASLELLDS 158
>gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 160/211 (75%), Gaps = 5/211 (2%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P +L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQL
Sbjct: 4 PNKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQL 63
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVG 121
WDTAGQERFRSLIPSYIRDS VA+VVYD+ ++SF KWI++V+ ERG D VI+ +VG
Sbjct: 64 WDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFDCIDKWIEDVKNERGEDNVILCVVG 123
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
NK+DL ++RQVS E+GE K++EL +F+ETS KAG+N+K LF+KIA +LP + ST
Sbjct: 124 NKSDLTDERQVSTEDGEKKAKELGAKIFMETSTKAGYNVKNLFKKIAKSLPEFQNSESTP 183
Query: 181 QEEMVDVNLRSTTG---NASQSQSQSSGCSC 208
+E + + TG + + Q S C C
Sbjct: 184 LDETENSDNTKKTGIIDITTNDELQQSSCQC 214
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
Length = 215
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 165/212 (77%), Gaps = 12/212 (5%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGS-DVIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA+VVYD+ ++SF KWI++V+TERGS +VI+ +VGNK+
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKTERGSENVILCIVGNKS 126
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQV+ EEGEAK++EL +F+ETS KAG N+K LF+KIA +LP + ST
Sbjct: 127 DLSDERQVTTEEGEAKAKELGATIFMETSTKAGHNVKNLFKKIAKSLPEFQNSDSTP--- 183
Query: 184 MVDVNLRSTTGNASQ------SQSQSSG-CSC 208
+ D N +T N +Q +++++ G C C
Sbjct: 184 LDDNNESNTANNKAQVIDISSTENENQGNCQC 215
>gi|344296898|ref|XP_003420139.1| PREDICTED: ras-related protein Rab-6A-like [Loxodonta africana]
Length = 363
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 144/172 (83%), Gaps = 6/172 (3%)
Query: 38 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSF 97
++ATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS+ AVVVYD+ + SF
Sbjct: 197 WEATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSF 256
Query: 98 LNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGF 157
T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+
Sbjct: 257 QQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGY 316
Query: 158 NIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQS-SGCSC 208
N+K LFR++AAALPGME+ +E+M+D+ L Q Q S GCSC
Sbjct: 317 NVKQLFRRVAAALPGMESTQDRSREDMIDIKLEK-----PQEQPVSEGGCSC 363
>gi|259906587|gb|ACW84383.1| GTPase, partial [Fenneropenaeus chinensis]
Length = 155
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/142 (86%), Positives = 133/142 (93%)
Query: 12 LVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF 71
LVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF
Sbjct: 14 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF 73
Query: 72 RSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQ 131
RSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ
Sbjct: 74 RSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQ 133
Query: 132 VSIEEGEAKSRELNVMFIETSA 153
VS EEGE K++ELNVMFIETSA
Sbjct: 134 VSTEEGERKAKELNVMFIETSA 155
>gi|294657272|ref|XP_459580.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
gi|199432566|emb|CAG87807.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
Length = 204
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 154/193 (79%), Gaps = 4/193 (2%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVR 59
M + L KYK+VFLGDQSVGKTS+ITRFMYD FD+ Y ATIGIDFLSKTMYLED +T+R
Sbjct: 1 MDKSNILRKYKIVFLGDQSVGKTSLITRFMYDTFDDQYAATIGIDFLSKTMYLEDNKTIR 60
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDS VAV+ YD+ +++SF N +KWI +V+ ERG DVIIV+
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSHVAVICYDITNKKSFENLNKWIQDVKLERGDDVIIVV 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMF-IETSAKAGFNIKPLFRKIAAALPGME--TL 176
VGNK+DL KRQV++EE EA + +N F IETS KA N+K LF+KIA++LP +E T
Sbjct: 121 VGNKSDLNNKRQVTMEECEAYLKSINGKFCIETSTKANHNVKQLFKKIASSLPDVEKSTK 180
Query: 177 SSTKQEEMVDVNL 189
T Q E VD+N+
Sbjct: 181 DETTQPETVDINI 193
>gi|449284060|gb|EMC90642.1| Ras-related protein Rab-6A, partial [Columba livia]
Length = 187
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 150/192 (78%), Gaps = 8/192 (4%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 1 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 60
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE
Sbjct: 61 RDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 120
Query: 140 KSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM--VDVNLRSTTGNAS 197
K++ELNVMFIETSAKAG+N+K + + L + + +M +D+ L
Sbjct: 121 KAKELNVMFIETSAKAGYNVKQVRTRWLKWLLLVHPCGTGDVPDMGLIDIKLEK-----P 175
Query: 198 QSQSQS-SGCSC 208
Q Q S GCSC
Sbjct: 176 QEQPVSEGGCSC 187
>gi|326914674|ref|XP_003203649.1| PREDICTED: ras-related protein Rab-6A-like, partial [Meleagris
gallopavo]
Length = 271
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/141 (85%), Positives = 133/141 (94%)
Query: 20 VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 50 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 109
Query: 80 RDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEA 139
RDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE
Sbjct: 110 RDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 169
Query: 140 KSRELNVMFIETSAKAGFNIK 160
K++ELNVMFIETSAKAG+N+K
Sbjct: 170 KAKELNVMFIETSAKAGYNVK 190
>gi|410075027|ref|XP_003955096.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS 2517]
gi|372461678|emb|CCF55961.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS 2517]
Length = 235
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 159/202 (78%), Gaps = 4/202 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L+KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 19 SLSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 78
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG-SDVIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA+VVYD+ ++SF KW+D+V+ ERG +V++ +VGNK
Sbjct: 79 AGQERFRSLIPSYIRDSKVAIVVYDITKKKSFEFIDKWVDDVKNERGEENVVLCIVGNKN 138
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQVS EEGEAK+++L +F+ETS KAG+N+K LF++IA +LP E S E
Sbjct: 139 DLGDERQVSTEEGEAKAKKLGAKIFMETSTKAGYNVKNLFKRIAKSLP--EFQSENTDES 196
Query: 184 MVDVNLRSTTGNASQSQSQSSG 205
+D L S TG + S + +G
Sbjct: 197 SLDNKLSSNTGGNNSSSNGKAG 218
>gi|395732216|ref|XP_003776036.1| PREDICTED: ras-related protein Rab-6C-like [Pongo abelii]
Length = 221
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/180 (68%), Positives = 143/180 (79%), Gaps = 6/180 (3%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLED T+RL+LWDTAGQER RSLIPSY RDS+ AV VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDGTIRLRLWDTAGQERLRSLIPSYSRDSAAAVAVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF T+KWID+VRTERGSDVII LVGNKTDL +KRQVSIE+GE K++ELNVMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIITLVGNKTDLADKRQVSIEDGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQS-SGCSC 208
ET AKAG+N+K LFR++AA LPGME+ +E+M D+ L Q Q S GCSC
Sbjct: 121 ETRAKAGYNVKQLFRRVAAVLPGMESTQDRSREDMSDIKLEK-----PQEQPVSEGGCSC 175
>gi|320586660|gb|EFW99330.1| Ras small monomeric GTPase [Grosmannia clavigera kw1407]
Length = 174
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 145/179 (81%), Gaps = 5/179 (2%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDN YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY
Sbjct: 1 MYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+++ +SF NT KWID+VR ERG+DVIIVLVGNKTDL +KR+V+ ++GE +++ N+MF+
Sbjct: 61 DISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKTDLNDKREVTTQQGEEEAKRNNLMFV 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAK G N+KPLF++IA ALPGME + Q +++++T SQ GC+C
Sbjct: 121 ETSAKVGHNVKPLFKRIAQALPGMEGTDAAAQASSQMIDVKTTPAPPSQ-----EGCAC 174
>gi|255712777|ref|XP_002552671.1| KLTH0C10384p [Lachancea thermotolerans]
gi|238934050|emb|CAR22233.1| KLTH0C10384p [Lachancea thermotolerans CBS 6340]
Length = 234
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 157/214 (73%), Gaps = 8/214 (3%)
Query: 3 PVSA------LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR 56
P+SA L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+
Sbjct: 21 PMSANRAGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDK 80
Query: 57 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-V 115
T+RLQLWDTAGQERFRSLIPSYIRDS VA+VVYDV +++SF KW+++V++ERG + V
Sbjct: 81 TIRLQLWDTAGQERFRSLIPSYIRDSHVAIVVYDVTNKKSFEYIDKWVEDVKSERGEENV 140
Query: 116 IIVLVGNKTDLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGME 174
++ +VGNK DL ++RQVS EEGE K++ LN +FIETS K GFN+K LFRKIA LP +
Sbjct: 141 VLCIVGNKNDLSDERQVSTEEGERKAQVLNAKIFIETSTKVGFNVKNLFRKIAKTLPEFQ 200
Query: 175 TLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
S ++ N + + + S C C
Sbjct: 201 KSDSVPLDDNATKNKPDVIDITTNEEQEQSSCQC 234
>gi|366992854|ref|XP_003676192.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS 4309]
gi|342302058|emb|CCC69831.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS 4309]
Length = 222
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 160/218 (73%), Gaps = 17/218 (7%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
AL KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 7 ALTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA+VVYD+ ++SF KWI++V+ ERG D VI+ +VGNK+
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKNERGDDNVILCIVGNKS 126
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQV+IEEGE K++ L +F+ETS KAG+N+K LF+KIA +LP + + +
Sbjct: 127 DLSDERQVTIEEGENKAKILGADIFMETSTKAGYNVKNLFKKIAKSLPEFQNSDTNPLD- 185
Query: 184 MVDVNLRSTTGNAS-------------QSQSQSSGCSC 208
D N ++ N S + Q Q+ GC C
Sbjct: 186 -TDGNGKNNKANESSGDKPGIIDISTNEEQEQAGGCQC 222
>gi|367017001|ref|XP_003682999.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
gi|359750662|emb|CCE93788.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
Length = 222
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 161/217 (74%), Gaps = 11/217 (5%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P +L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQL
Sbjct: 6 PGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQL 65
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVG 121
WDTAGQERFRSLIPSYIRDS VA+VVYD+ ++SF KWI++V+ ERG + VI+ +VG
Sbjct: 66 WDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEFIDKWIEDVKNERGEENVILCIVG 125
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGM---ETLS 177
NK+DL ++RQVS EEGEAK++ L +F+ETS KAG N+K LF+KIA +LP +
Sbjct: 126 NKSDLADERQVSTEEGEAKAKLLGAKIFMETSTKAGHNVKNLFKKIAKSLPEFQEGQHAG 185
Query: 178 STKQEEMVDVNLRSTTGNA------SQSQSQSSGCSC 208
+ + + +V + G+ ++ Q+Q GC C
Sbjct: 186 ALEGDNSNEVGKKEANGSGVIDITTTEDQAQGGGCQC 222
>gi|365990439|ref|XP_003672049.1| hypothetical protein NDAI_0I02380 [Naumovozyma dairenensis CBS 421]
gi|343770823|emb|CCD26806.1| hypothetical protein NDAI_0I02380 [Naumovozyma dairenensis CBS 421]
Length = 222
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 158/215 (73%), Gaps = 13/215 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+VVYD+ ++SF KWI++V+ ERG D VI+ +VGNK D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIVVYDITKKESFDFIDKWINDVKNERGEDNVILCIVGNKND 127
Query: 126 LVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALP-----------GM 173
L ++RQVSIEEGE K+++L +F+ETS KAG+N+K LF++IA +LP G
Sbjct: 128 LTDQRQVSIEEGENKAKQLGANIFMETSTKAGYNVKTLFKRIAKSLPEFQNSTSDPLSGD 187
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+S K + V + +++ Q SGC C
Sbjct: 188 SKTTSDKNDANVGNDKAGIIDISTEEGQQQSGCQC 222
>gi|121716549|ref|XP_001275840.1| rab6 [Aspergillus clavatus NRRL 1]
gi|119403997|gb|EAW14414.1| rab6 [Aspergillus clavatus NRRL 1]
Length = 229
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 159/232 (68%), Gaps = 47/232 (20%)
Query: 17 DQSVGKTSIITRFMYDKFDNTYQATIGIDFLSK--------------------------- 49
D VGKTS+ITRFMYD FDNTYQATIGIDFLSK
Sbjct: 5 DTIVGKTSLITRFMYDSFDNTYQATIGIDFLSKVYSILAPIPMTLSGSTPACFCVALHLQ 64
Query: 50 -------------TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQS 96
TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +S
Sbjct: 65 PVHIELIFGFAHQTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKS 124
Query: 97 FLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAG 156
F NT KWID+VR ERG+DVIIVLVGNKTDL +KR+V+ +GE ++++ +MFIETSAK G
Sbjct: 125 FQNTRKWIDDVRGERGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVG 184
Query: 157 FNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
N+K LFR+IA ALPGME + ++ +M+DVN+ + + + + GC+C
Sbjct: 185 HNVKQLFRRIAQALPGMEG-EANRESQMIDVNI------SPKETTSNDGCAC 229
>gi|426337217|ref|XP_004032617.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-6C-like
[Gorilla gorilla gorilla]
Length = 278
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 146/185 (78%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSV KTS+IT YQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITEXXXXXXXXXYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER RSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTE GSDVII LVGN+T
Sbjct: 69 TAGQERLRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITLVGNRT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ LNV FIET AKAG+N+K LF ++AAALPGME+ +E+M
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFGRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNL 189
D+ L
Sbjct: 189 SDIKL 193
>gi|401624481|gb|EJS42537.1| ypt6p [Saccharomyces arboricola H-6]
Length = 216
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 160/214 (74%), Gaps = 15/214 (7%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG-SDVIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA+VVYD+ R+SF KWI++V+ ERG +VI+ +VGNK+
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIVVYDITKRKSFEYIDKWIEDVKNERGEENVILCIVGNKS 126
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQ+S EEGE K++ L +F+ETS KAG+N+K LF+KIA +LP + ST
Sbjct: 127 DLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKTLFKKIAKSLPEFQNSDSTP--- 183
Query: 184 MVDVNLRSTTGNASQ---------SQSQSSGCSC 208
+D + +GN ++ + + SGC C
Sbjct: 184 -LDGENANNSGNQNKPGVIDISTTDEQEQSGCQC 216
>gi|355704896|gb|EHH30821.1| Ras-related protein Rab-41, partial [Macaca mulatta]
gi|355757440|gb|EHH60965.1| Ras-related protein Rab-41, partial [Macaca fascicularis]
Length = 222
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 150/194 (77%), Gaps = 3/194 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+ SVGKTS+ITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCKSKLLFLGEPSVGKTSVITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 87
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+LVGNK D
Sbjct: 88 AGQERFHSLIPSYIRDSTIAVVVYDITNISSFKETDKWVEHVRAERGDDVVIMLVGNKID 147
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ EEGE KSR LNVMFIETSAK G+N+K LFR++ +AL TL K E V
Sbjct: 148 LDNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVVSALLSTRTLPPPK-EGTV 206
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 207 EIELESFEESGNRS 220
>gi|229462781|sp|Q5JT25.2|RAB41_HUMAN RecName: Full=Ras-related protein Rab-41
gi|119625752|gb|EAX05347.1| RAB41, member RAS homolog family [Homo sapiens]
Length = 222
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 152/194 (78%), Gaps = 3/194 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+QSVGKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 87
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+L+GNK D
Sbjct: 88 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKID 147
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ E+GE KSR LNVMFIETSAK G+N+K LFR++A+AL T S +E V
Sbjct: 148 LDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTV 206
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 207 EIELESFEESGNRS 220
>gi|354470906|ref|XP_003497685.1| PREDICTED: ras-related protein Rab-6B-like, partial [Cricetulus
griseus]
Length = 165
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/169 (69%), Positives = 140/169 (82%), Gaps = 4/169 (2%)
Query: 40 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLN 99
ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF
Sbjct: 1 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQ 60
Query: 100 TSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNI 159
TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+
Sbjct: 61 TSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNV 120
Query: 160 KPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
K LFR++A+ALPGME + +E M+D+ L + + GCSC
Sbjct: 121 KQLFRRVASALPGMENVQEKSKEGMIDIKL----DKPQEPPASEGGCSC 165
>gi|448090573|ref|XP_004197105.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|448094995|ref|XP_004198136.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|359378527|emb|CCE84786.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|359379558|emb|CCE83755.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 155/198 (78%), Gaps = 5/198 (2%)
Query: 5 SALAKYKLVFLGDQS-VGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQL 62
S L KYK+VFLGDQS VGKTS+ITRFMYD FD+ Y ATIGIDFLSKTMYLED +T+RLQL
Sbjct: 8 SVLRKYKIVFLGDQSAVGKTSLITRFMYDTFDDQYAATIGIDFLSKTMYLEDNKTIRLQL 67
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDS VAVV YD+ +R+SF N KWI +V++ERG DVIIV+VGN
Sbjct: 68 WDTAGQERFRSLIPSYIRDSHVAVVCYDITNRKSFQNLHKWIQDVKSERGEDVIIVIVGN 127
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMF-IETSAKAGFNIKPLFRKIAAALPGMETLS--ST 179
K DL +RQV+ EEGE ++ + F IETS KA N+K LF+KIA++LP E+ + ++
Sbjct: 128 KLDLNARRQVTSEEGEEYAKSVGASFSIETSTKANHNVKLLFKKIASSLPEFESTAQNNS 187
Query: 180 KQEEMVDVNLRSTTGNAS 197
Q E V++N+ + +S
Sbjct: 188 SQSETVEINVEPSAPESS 205
>gi|320580277|gb|EFW94500.1| GTPase, Ras-like GTP binding protein [Ogataea parapolymorpha DL-1]
Length = 200
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 158/208 (75%), Gaps = 15/208 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLGDQ VGKTS+ITRFMYD FD Y ATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 2 LTKYKIVFLGDQGVGKTSLITRFMYDTFDAHYAATIGIDFLSKTMYLDDKTIRLQLWDTA 61
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS+VA++VYD+ +++SF N SKW D V+ ERGS+V+I+LVGNK+DL
Sbjct: 62 GQERFRSLIPSYIRDSNVAIIVYDITNKESFQNVSKWFDYVKQERGSNVLIILVGNKSDL 121
Query: 127 VEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK----- 180
E + + EEGE+ ++L FIETS+K G+N+K LF+K+A LP ++ ++ +
Sbjct: 122 -ENKIIPNEEGESMCKKLGCNFFIETSSKNGYNVKNLFKKVAKLLPELQDENTDQALDND 180
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ +M+DV A+ +Q + GC C
Sbjct: 181 KVQMIDV--------AANNQEAADGCQC 200
>gi|390479890|ref|XP_002763014.2| PREDICTED: ras-related protein Rab-41 [Callithrix jacchus]
Length = 224
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/182 (67%), Positives = 142/182 (78%), Gaps = 1/182 (0%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
K KLVFLGD S+GKTSIITRFMYD F T+QAT+GIDFLSK MYLEDR V+LQLWDTAG
Sbjct: 30 CKAKLVFLGDPSLGKTSIITRFMYDSFGCTFQATVGIDFLSKNMYLEDRIVQLQLWDTAG 89
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QERF SLIPSYIR S++AVVVYDV + SF T KW++ VR ERG DV+I+LVGNK DL
Sbjct: 90 QERFHSLIPSYIRGSTIAVVVYDVTNINSFKETDKWVERVRAERGDDVVIMLVGNKIDLN 149
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+RQV+ EEGE KSR LNVMFIETSAK +N+ LFR +A+ALP T S +E V++
Sbjct: 150 NERQVTAEEGEEKSRNLNVMFIETSAKTSYNVDKLFRCVASALPSTST-SPPPKEGTVEI 208
Query: 188 NL 189
L
Sbjct: 209 QL 210
>gi|444320471|ref|XP_004180892.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
gi|387513935|emb|CCH61373.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
Length = 207
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 156/209 (74%), Gaps = 14/209 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 6 LTKYKIVFLGEQGVGKTSLITRFMYDTFDEHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 65
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+VVYD+ ++SF KWI +V+ ERG D VI+ +VGNK+D
Sbjct: 66 GQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIQDVKNERGDDGVILCIVGNKSD 125
Query: 126 LVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMET-----LSST 179
L ++RQVS EEGE K++ L +F+ETS KAG+N+K LF+KIA +LP E L +
Sbjct: 126 LSDQRQVSNEEGENKAKLLGADIFMETSTKAGYNVKNLFKKIAKSLPEFENTEGNPLENE 185
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
++ ++D+ ++ Q +GC C
Sbjct: 186 ERAGVIDI-------GENEEPKQEAGCQC 207
>gi|254579943|ref|XP_002495957.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
gi|238938848|emb|CAR27024.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
Length = 214
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 160/206 (77%), Gaps = 3/206 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 9 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA+VVYD+ R+SF KWI++V+ ERG + VI+ +VGNK+
Sbjct: 69 AGQERFRSLIPSYIRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGEENVILCIVGNKS 128
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGM-ETLSSTKQE 182
DL ++RQVS EEGE K++ L +F+ETS KAG+N+K LF++IA +LP E+ ++ ++
Sbjct: 129 DLSDERQVSTEEGETKAKVLGAKIFMETSTKAGYNVKNLFKRIAKSLPEFQESPNTGVKD 188
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + N ++ + Q+S C C
Sbjct: 189 DSNENNAGVIDITTNEEEQQASSCQC 214
>gi|448526176|ref|XP_003869288.1| Ypt6 protein [Candida orthopsilosis Co 90-125]
gi|380353641|emb|CCG23152.1| Ypt6 protein [Candida orthopsilosis]
Length = 215
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 152/207 (73%), Gaps = 7/207 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY TIGIDFLSKTMYLE+ +TVRLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEEGKTVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SFLN KWI +V+ ERG DV+IVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFLNLDKWIKDVKVERGDDVVIVLVGNKSD 128
Query: 126 LVE-KRQVSIEEGEAKSREL-NVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
L KRQVS+EE E ++ + FIETS KA N+K LF+KIA +LP + +E
Sbjct: 129 LANTKRQVSVEEVEQLHNKIGSNFFIETSTKANHNVKLLFKKIAQSLPDFNNDEDEENQE 188
Query: 184 MVDVN----LRSTTGNASQSQSQSSGC 206
+ N + T N ++Q SS C
Sbjct: 189 QANTNKPETINITIENDDKNQGTSSCC 215
>gi|397498900|ref|XP_003820211.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41 [Pan
paniscus]
Length = 222
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 151/194 (77%), Gaps = 3/194 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+QSVGKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 87
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ V ERG DV+I+L+GNK D
Sbjct: 88 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVXAERGDDVVIMLLGNKID 147
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ E+GE KSR LNVMFIETSAK G+N+K LFR++A+AL T S +E V
Sbjct: 148 LDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTV 206
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 207 EIELESFEESGNRS 220
>gi|365759371|gb|EHN01162.1| Ypt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842296|gb|EJT44532.1| YPT6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 216
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 161/215 (74%), Gaps = 17/215 (7%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA++VYD+ R+SF KWI++V+ ERG + VI+ +VGNK+
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGEENVILCIVGNKS 126
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQ+S EEGE K++ L +F+ETS KAG+N+K LF++IA +LP + ST
Sbjct: 127 DLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKTLFKRIAKSLPEFQNSESTP--- 183
Query: 184 MVDVNLRSTTGN----------ASQSQSQSSGCSC 208
+D +T+GN ++ Q Q+S C C
Sbjct: 184 -LDGENANTSGNQNKPGVIDISTTEEQEQTS-CQC 216
>gi|349579968|dbj|GAA25129.1| K7_Ypt6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 215
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 157/212 (74%), Gaps = 12/212 (5%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA++VYD+ R+SF KWI++V+ ERG + VI+ +VGNK+
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKS 126
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQ+S EEGE K+ L +F+ETS KAG+N+K LF+KIA +LP + ST
Sbjct: 127 DLSDERQISTEEGEKKAELLGAKIFMETSTKAGYNVKALFKKIAKSLPEFQNSESTP--- 183
Query: 184 MVDVNLRSTTGN-------ASQSQSQSSGCSC 208
+ + N S N ++ + + S C C
Sbjct: 184 LDNENANSANQNKPGVIDISTAEEQEQSACQC 215
>gi|6323291|ref|NP_013363.1| Ypt6p [Saccharomyces cerevisiae S288c]
gi|2500077|sp|Q99260.1|YPT6_YEAST RecName: Full=GTP-binding protein YPT6
gi|577182|gb|AAB67381.1| Ylr262cp [Saccharomyces cerevisiae]
gi|927545|emb|CAA42166.1| Ypt6p [Saccharomyces cerevisiae]
gi|45269764|gb|AAS56262.1| YLR262C [Saccharomyces cerevisiae]
gi|151941095|gb|EDN59475.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405321|gb|EDV08588.1| GTP-binding protein YPT6 [Saccharomyces cerevisiae RM11-1a]
gi|207342890|gb|EDZ70519.1| YLR262Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148244|emb|CAY81491.1| Ypt6p [Saccharomyces cerevisiae EC1118]
gi|285813678|tpg|DAA09574.1| TPA: Ypt6p [Saccharomyces cerevisiae S288c]
gi|392297767|gb|EIW08866.1| Ypt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 156/209 (74%), Gaps = 6/209 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA++VYD+ R+SF KWI++V+ ERG + VI+ +VGNK+
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKS 126
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST---- 179
DL ++RQ+S EEGE K++ L +F+ETS KAG+N+K LF+KIA +LP + ST
Sbjct: 127 DLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSLPEFQNSESTPLDS 186
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + N ++ + + S C C
Sbjct: 187 ENANSANQNKPGVIDISTAEEQEQSACQC 215
>gi|403305127|ref|XP_003943122.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41 [Saimiri
boliviensis boliviensis]
Length = 225
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 141/184 (76%), Gaps = 1/184 (0%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KLVFLG+QSVGKTSIITRF YD F T+QAT+G+DFLSKTM LEDR V+LQLWDT
Sbjct: 29 SLCKAKLVFLGEQSVGKTSIITRFTYDSFGCTFQATVGVDFLSKTMCLEDRIVQLQLWDT 88
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIR S++AVVVYD SF T KW++ VR ERG DV+I+LVGNK D
Sbjct: 89 AGQERFHSLIPSYIRGSTIAVVVYDPGDISSFKETDKWVEHVRAERGDDVVIMLVGNKID 148
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ EEGE KSR LNVMFIETSAK +N+ LFR +A+ LP T S +E +
Sbjct: 149 LNNKRQVTAEEGEEKSRNLNVMFIETSAKTSYNVDKLFRHVASVLPSTST-SHPPKEGPI 207
Query: 186 DVNL 189
++ L
Sbjct: 208 EIQL 211
>gi|403216033|emb|CCK70531.1| hypothetical protein KNAG_0E02720 [Kazachstania naganishii CBS
8797]
Length = 231
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 153/203 (75%), Gaps = 12/203 (5%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
AL+KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D T+R QLWDT
Sbjct: 13 ALSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDHTIRFQLWDT 72
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA+VVYD+ ++SF KW+++V+ ER +D VI +VGNK+
Sbjct: 73 AGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWVEDVKNERSADNVIFCIVGNKS 132
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQVS EEGE K++ L +F+ETS KAG+N+K LF+KIA +LP +
Sbjct: 133 DLTDERQVSTEEGEQKTKVLGAQIFMETSTKAGYNVKNLFKKIAKSLPEFQD-------- 184
Query: 184 MVDVN-LRSTTGNASQSQSQSSG 205
D N L S +GN +Q +G
Sbjct: 185 -TDTNTLDSNSGNQQGGSAQGNG 206
>gi|256271753|gb|EEU06790.1| Ypt6p [Saccharomyces cerevisiae JAY291]
Length = 215
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 156/212 (73%), Gaps = 12/212 (5%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA++VYD+ R+SF KWI++V+ ERG + VI+ +VGNK+
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKS 126
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL ++RQ+S EEGE K++ L +F+ETS K G+N+K LF+KIA +LP + ST
Sbjct: 127 DLSDERQISTEEGEKKAKLLGAKIFMETSTKEGYNVKALFKKIAKSLPEFQNSESTP--- 183
Query: 184 MVDVNLRSTTGN-------ASQSQSQSSGCSC 208
+ N S N ++ + + S C C
Sbjct: 184 LDSENANSANQNKPGVIDISTAEEQEQSACQC 215
>gi|426396293|ref|XP_004064382.1| PREDICTED: ras-related protein Rab-41 [Gorilla gorilla gorilla]
Length = 221
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+QS GKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCKSKLLFLGEQS-GKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 86
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+L+GNK D
Sbjct: 87 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKID 146
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ EEGE KSR LNVMFIETSAK G+N+K LFR++A+AL T S +E V
Sbjct: 147 LDNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTV 205
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 206 EIELESFEESGNRS 219
>gi|50292103|ref|XP_448484.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527796|emb|CAG61445.1| unnamed protein product [Candida glabrata]
Length = 219
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 157/217 (72%), Gaps = 21/217 (9%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 9 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDNYQATIGIDFLSKTMYLDDKTIRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGS-DVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+VVYD+ R+SF KWI++V+ ERG+ +VI+ +VGNK+D
Sbjct: 69 GQERFRSLIPSYIRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGAENVILCVVGNKSD 128
Query: 126 LVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
L ++RQV+ EEGE K+++L +F++TS K G+N+K LF+KIA +LP + + E
Sbjct: 129 LADERQVTAEEGEKKAQDLGAKIFMQTSTKVGYNVKNLFKKIAKSLPEFQDSDANPLE-- 186
Query: 185 VDVNLRSTTGN-------------ASQSQSQSSGCSC 208
N GN + QSQ SGC C
Sbjct: 187 ---NTGGAAGNRNSNKAGVIDISTTDEDQSQ-SGCQC 219
>gi|10120632|pdb|1D5C|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab6 Complexed
With Gdp
Length = 162
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/162 (71%), Positives = 136/162 (83%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYKLVFLG+Q+VGKTSIITRF YD FDN YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQ
Sbjct: 1 KYKLVFLGEQAVGKTSIITRFXYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG DVII LVGNKTDL +
Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 120
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
R+V+ EEG K++E N F ETSAKAG NIK LF+K A+ L
Sbjct: 121 LRKVTYEEGXQKAQEYNTXFHETSAKAGHNIKVLFKKTASKL 162
>gi|297716924|ref|XP_002834740.1| PREDICTED: ras-related protein Rab-41 [Pongo abelii]
Length = 221
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L + KL+FLG+QS GKTSIITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCESKLLFLGEQS-GKTSIITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 86
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+LVGNK D
Sbjct: 87 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLVGNKID 146
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ EEGE KSR LNVMFIETSAK G+N+K LFR++A+A T S +E V
Sbjct: 147 LDNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASAFLSTRT-SPPPKEGTV 205
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 206 EIELESFEESGNRS 219
>gi|254572922|ref|XP_002493570.1| GTPase, Ras-like GTP binding protein involved in the secretory
pathway [Komagataella pastoris GS115]
gi|238033369|emb|CAY71391.1| GTPase, Ras-like GTP binding protein involved in the secretory
pathway [Komagataella pastoris GS115]
Length = 203
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/202 (59%), Positives = 149/202 (73%), Gaps = 8/202 (3%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
AL KYK+VFLGDQ VGKTS+ITRFMYD F++ Y AT+GIDFLSKT+YL+D+TVRLQLWDT
Sbjct: 2 ALTKYKIVFLGDQGVGKTSLITRFMYDTFNDHYAATVGIDFLSKTLYLDDKTVRLQLWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSL+PSYIRDS+VA++VYD S+ SF + KW D+VR ERG +VII LV NK D
Sbjct: 62 AGQERFRSLVPSYIRDSNVAIIVYDTTSKSSFQSVDKWCDDVRNERGENVIICLVANKAD 121
Query: 126 LVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAAL------PGMETLSS 178
L ++R +S E+GE K+ L V +FIETS K G+N+K LFRK+A L PG +
Sbjct: 122 LADQRVISTEDGEKKATGLKVDLFIETSTKKGYNVKNLFRKVAKTLLEQDGSPGQDPKID 181
Query: 179 TKQEEMVDVNLRSTTGNASQSQ 200
EM+D+ + N SQ Q
Sbjct: 182 NDGVEMIDL-AEANVENESQCQ 202
>gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|374110173|gb|AEY99078.1| FAGR257Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 147/175 (84%), Gaps = 2/175 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L+KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKT+YL+DRT+RLQLWDTA
Sbjct: 10 LSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTVYLDDRTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG-SDVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+VVYD+ +++SF KW+++VR ERG ++I+ +VGNK+D
Sbjct: 70 GQERFRSLIPSYIRDSHVAIVVYDITNKKSFEYIDKWVEDVRNERGEENLILCIVGNKSD 129
Query: 126 LVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
LV++R+V++EEGE K++ LN +F+ETS KAGFN+ LF++IA LP + T
Sbjct: 130 LVDERKVTVEEGENKAKLLNAKIFVETSTKAGFNVGALFKRIAKLLPEFQNGKGT 184
>gi|340376610|ref|XP_003386825.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 159/204 (77%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + K+K+VFLG+++VGKTSIITRFMYD FD+ YQATIGIDFL+KTMYL+DRTVRLQLWD
Sbjct: 5 NPMRKFKIVFLGEEAVGKTSIITRFMYDTFDSNYQATIGIDFLAKTMYLDDRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF++L+P+YIRDS++A+VVYD+ + SF +WI++VR ERG DV+IVL GNK
Sbjct: 65 TAGQERFKALVPAYIRDSAIAIVVYDITNSASFDAVDQWIEDVRAERGDDVVIVLTGNKL 124
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL E R +S E+GE+K++ELNV+F+ETSAK+G NIK LF++ ALP ME ++E
Sbjct: 125 DL-EDRVISTEKGESKAKELNVIFVETSAKSGANIKQLFKRAVLALPSMEIEEEEEEENK 183
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+ ++ T + + QS+ C C
Sbjct: 184 KEDIVQVTP--VEEEKDQSTVCWC 205
>gi|332247166|ref|XP_003272726.1| PREDICTED: ras-related protein Rab-41 [Nomascus leucogenys]
Length = 221
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+QS GKTS+ITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLWKSKLLFLGEQS-GKTSVITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 86
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+LVGNK D
Sbjct: 87 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLVGNKID 146
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ EEGE KSR LNVMFIETSAK G+N+K LF+++A+AL T S +E V
Sbjct: 147 LDNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFQRVASALLSTRT-SPPPKEGTV 205
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 206 EIELESFEESGNRS 219
>gi|354545927|emb|CCE42656.1| hypothetical protein CPAR2_202990 [Candida parapsilosis]
Length = 215
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 152/207 (73%), Gaps = 7/207 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY TIGIDFLSKTMYLE+ +TVRLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEEGKTVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SFLN KWI +V+ ERG DV+IVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFLNLDKWIKDVKVERGDDVVIVLVGNKSD 128
Query: 126 LVE-KRQVSIEEGEAKSREL-NVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
L KRQVS+EE E ++ + FIETS KA N+K LF+KIA +LP + + E
Sbjct: 129 LASTKRQVSVEEVEQLHNKIGSKFFIETSTKANHNVKLLFKKIAQSLPDFNNDENDENRE 188
Query: 184 MVDVN----LRSTTGNASQSQSQSSGC 206
+ + + T N ++Q SS C
Sbjct: 189 PANADKPETINITIENDDKNQGTSSCC 215
>gi|296011025|ref|NP_001027898.2| ras-related protein Rab-41 [Homo sapiens]
gi|109658998|gb|AAI17240.1| RAB41, member RAS oncogene family [Homo sapiens]
gi|313882768|gb|ADR82870.1| Unknown protein [synthetic construct]
Length = 221
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+QS GKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCKSKLLFLGEQS-GKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 86
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+L+GNK D
Sbjct: 87 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKID 146
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ E+GE KSR LNVMFIETSAK G+N+K LFR++A+AL T S +E V
Sbjct: 147 LDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTV 205
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 206 EIELESFEESGNRS 219
>gi|402910441|ref|XP_003917886.1| PREDICTED: ras-related protein Rab-41 [Papio anubis]
Length = 223
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+ S GKTS+ITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCKSKLLFLGEPS-GKTSVITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 86
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+LVGNK D
Sbjct: 87 AGQERFHSLIPSYIRDSTIAVVVYDITNISSFKETDKWVEHVRAERGDDVVIMLVGNKID 146
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L KRQV+ EEGE KSR LNVMFIETSAK G+N+K LFR + +AL TL K E V
Sbjct: 147 LDNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRHVVSALLSTRTLPPPK-EGTV 205
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 206 EIELESFEESGNRS 219
>gi|152013703|gb|ABS19967.1| ras small monomeric GTPase Rab6 protein [Artemia franciscana]
Length = 150
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/142 (81%), Positives = 130/142 (91%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVF G+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFPGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TS+WID+VRTERG+DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSRWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVEKRQVSIEEGEAKSRELNV 146
DL +KRQVS EEGE ++RELNV
Sbjct: 129 DLSDKRQVSTEEGERRARELNV 150
>gi|150866330|ref|XP_001385886.2| hypothetical protein PICST_61694 [Scheffersomyces stipitis CBS
6054]
gi|149387586|gb|ABN67857.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 224
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 142/172 (82%), Gaps = 3/172 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYL+D RT+RLQLWDT
Sbjct: 19 LRKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLDDNRTIRLQLWDT 78
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SF N KWI +V+ ERG DVIIVLVGNK+D
Sbjct: 79 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFNNLDKWIKDVKLERGDDVIIVLVGNKSD 138
Query: 126 LV-EKRQVSIEEGEAKSREL-NVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
L +KRQV++E+ EA R++ + FIETS KA N+K LF+KIA +LP T
Sbjct: 139 LANDKRQVTLEDVEALHRKVGSKFFIETSTKANHNVKLLFKKIAQSLPEFNT 190
>gi|363750482|ref|XP_003645458.1| hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889092|gb|AET38641.1| Hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
Length = 221
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 17/212 (8%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
AL+KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKT+YL+DR +RLQLWDT
Sbjct: 9 ALSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTVYLDDRNIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG-SDVIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA+VVYDV +++SF KW+++V+TERG ++I+ +VGNK
Sbjct: 69 AGQERFRSLIPSYIRDSHVAIVVYDVTNKRSFEYIDKWVEDVKTERGEENLILCIVGNKN 128
Query: 125 DLVEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALP---------GME 174
DLV++R VS +EGE K++ LN +F+ETS KAGFN+K LF+ IA LP G+
Sbjct: 129 DLVDERSVSTKEGEMKAQLLNAKIFMETSTKAGFNVKQLFKSIAKLLPEFQNTKVSSGVL 188
Query: 175 TLSSTKQEE------MVDVNLRSTTGNASQSQ 200
S K ++D++ +T GN S Q
Sbjct: 189 DGESEKHNNGGDKPGVIDISTPATGGNESSCQ 220
>gi|145534476|ref|XP_001452982.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834215|emb|CAI44484.1| rab_A75 [Paramecium tetraurelia]
gi|124420682|emb|CAK85585.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 152/208 (73%), Gaps = 6/208 (2%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V+ L+KYKLVFLGDQSVGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLW
Sbjct: 9 VAPLSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLW 68
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDS+VAVV YDV +QSF + +KWI++VR ERG+DVII LV NK
Sbjct: 69 DTAGQERFRSLIPSYIRDSAVAVVCYDVEVKQSFDSVAKWIEDVRLERGNDVIIFLVANK 128
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS----- 178
DL E R VS E+G A ++E + FIE SAK+G N++ LF++IAA LPG ET
Sbjct: 129 IDL-ENRVVSTEQGAALAKEQDAHFIEVSAKSGSNVELLFKQIAATLPGTETSQMVNSVV 187
Query: 179 TKQEEMVDVNLRSTTGNASQSQSQSSGC 206
+ + ++ + +T G + + S C
Sbjct: 188 NQANQPSNIKIDNTQGQDQEKNDRKSCC 215
>gi|340386562|ref|XP_003391777.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 158/204 (77%), Gaps = 3/204 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + K+K+VFLG+++VGKTSIITRFMYD FD+ YQATIGIDFL+KTMYL+DR VRLQLWD
Sbjct: 5 NPMRKFKIVFLGEEAVGKTSIITRFMYDTFDSNYQATIGIDFLAKTMYLDDRMVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF++L+P+YIRDS++A+VVYD+ + SF +WI++VR ERG DV+IVL GNK
Sbjct: 65 TAGQERFKALVPAYIRDSAIAIVVYDITNSASFDAVDQWIEDVRAERGDDVVIVLTGNKL 124
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL E R +S E+GE+K++ELNV+F+ETSAK+G NIK LF++ ALP ME ++E
Sbjct: 125 DL-EDRVISTEKGESKAKELNVIFVETSAKSGANIKQLFKRAVLALPSMEIEEEEEEENK 183
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+ ++ T + + QS+ C C
Sbjct: 184 KEDIVQVTP--VEEEKDQSTVCWC 205
>gi|412991207|emb|CCO16052.1| predicted protein [Bathycoccus prasinos]
Length = 295
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/224 (60%), Positives = 161/224 (71%), Gaps = 38/224 (16%)
Query: 17 DQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLI 75
DQSVGKTS+I+RFMYDKFD TYQATIGIDFLSKT++LE+ R VRLQLWDTAGQERFRSLI
Sbjct: 78 DQSVGKTSVISRFMYDKFDATYQATIGIDFLSKTVHLENSRGVRLQLWDTAGQERFRSLI 137
Query: 76 PSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIE 135
PSYIRDSSVAV+VYDVA+RQSFLN +KWIDEV+ ERG +V+I +VGNKTDLVE+R+V E
Sbjct: 138 PSYIRDSSVAVIVYDVANRQSFLNVAKWIDEVKQERGENVVIAIVGNKTDLVEEREVETE 197
Query: 136 EGEAKSRELNV-------------------MFIETSAKAGFNIKPLFRKIAAALPGMET- 175
EGE +R LNV +FIE SAKAG+N+K LFRKIA ALP +
Sbjct: 198 EGEKFARGLNVGNSSSHSESGSTNGGNGGAIFIEASAKAGYNVKALFRKIAMALPSADVN 257
Query: 176 -----------LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ +E++VDV L ST N+ +SGC+C
Sbjct: 258 ANNTNNNNNSASEANAKEQLVDVKLTSTNANS------ASGCAC 295
>gi|313241573|emb|CBY33817.1| unnamed protein product [Oikopleura dioica]
Length = 180
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/173 (65%), Positives = 137/173 (79%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
+ PV +L KYKLVFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKT+ ++D TVRL
Sbjct: 4 LQPVQSLKKYKLVFLGEQGVGKTSLITRFMYDSFDQHYQATIGIDFLSKTLQIDDNTVRL 63
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDS+V ++VY+V +SF WI +V+ +RG DVII LV
Sbjct: 64 QLWDTAGQERFRSLIPSYIRDSNVGIIVYNVTEEKSFSKIDTWIKDVKDQRGEDVIIFLV 123
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
GNKTDL KR+V I E K+ E NV FIETSAK+G+N+ LF++IA A+ G+
Sbjct: 124 GNKTDLEAKRKVDISVAEKKAAEHNVHFIETSAKSGYNVNALFQRIARAITGL 176
>gi|358338307|dbj|GAA56637.1| Ras-related protein Rab-6.2 [Clonorchis sinensis]
Length = 336
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 143/183 (78%), Gaps = 12/183 (6%)
Query: 9 KYKLVFLGDQSV------GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
K L+FL +S GKTS+ITRFMY+ FD+ YQATIGIDFLSKTMYLEDRT+RLQL
Sbjct: 110 KTPLLFLAVRSCADALSFGKTSLITRFMYETFDSVYQATIGIDFLSKTMYLEDRTIRLQL 169
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAVVVYD+ +SF T+KWID+VR ERGSDVII+LVGN
Sbjct: 170 WDTAGQERFRSLIPSYIRDSSVAVVVYDICVVESFQQTAKWIDDVRNERGSDVIIMLVGN 229
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL +KR+V+ EEGE +R+LNVMFIETSAKAG+N+K A+P ++ L S
Sbjct: 230 KTDLSDKRKVTTEEGERLARDLNVMFIETSAKAGYNVK------VVAIPSVKYLVSVTPN 283
Query: 183 EMV 185
V
Sbjct: 284 RCV 286
>gi|340504136|gb|EGR30614.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 230
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/170 (66%), Positives = 136/170 (80%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L KYKLVFLGDQ+VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLQKYKLVFLGDQAVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVV YDV +RQSF N +KWI++VR ER +VII LVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVVCYDVTNRQSFDNVTKWIEDVRNERRQEVIICLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
D+ +KRQ+ +G KS+EL+V + E SA +G NI LF++IA LPG E
Sbjct: 131 DMQDKRQIQYADGLQKSKELDVKYFEVSALSGENIPQLFKEIACMLPGAE 180
>gi|255721801|ref|XP_002545835.1| GTP-binding protein ryh1 [Candida tropicalis MYA-3404]
gi|240136324|gb|EER35877.1| GTP-binding protein ryh1 [Candida tropicalis MYA-3404]
Length = 215
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 151/210 (71%), Gaps = 13/210 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SF N KWI +V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 L-VEKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGM-------ETL 176
L +KRQVS+E+ E ++ FIETS KA N+K LF+KIA +LP +
Sbjct: 129 LATDKRQVSLEDVEILQNKIGARFFIETSTKANHNVKLLFKKIAQSLPEFNQDENSEDAN 188
Query: 177 SSTKQEEMVDVNLRSTTGNASQSQSQSSGC 206
+ E VD+ S N +Q S+ C
Sbjct: 189 NKNNHPETVDI---SIDNNTDTNQGSSTCC 215
>gi|241958896|ref|XP_002422167.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223645512|emb|CAX40171.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 219
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 153/208 (73%), Gaps = 13/208 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SF N KWI +V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-EKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK--- 180
L +KRQVS+++ E ++ FIETS KA N+K LF+KIA +LP S+ K
Sbjct: 129 LASDKRQVSLDDVEQLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPDFNQESNDKAND 188
Query: 181 -------QEEMVDVNLRSTTGNASQSQS 201
Q E +D+ + +T G SQ S
Sbjct: 189 DHNQNNNQSETIDITIDNTAGPNSQGTS 216
>gi|145529337|ref|XP_001450457.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831341|emb|CAI39286.1| rab_B75 [Paramecium tetraurelia]
gi|124418068|emb|CAK83060.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 153/213 (71%), Gaps = 15/213 (7%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V+ L+KYKLVFLGDQSVGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLW
Sbjct: 9 VAPLSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLW 68
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDS+VAVV YDV +QSF + KWI++VR ERG+DVII LV NK
Sbjct: 69 DTAGQERFRSLIPSYIRDSAVAVVCYDVEVKQSFESVVKWIEDVRLERGNDVIIFLVANK 128
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL E R +S E+G ++E + FIE SAK G N++ LF++IAA LPG ET +
Sbjct: 129 IDL-ENRVISTEQGATLAKEQDAHFIEVSAKLGSNVELLFKQIAATLPGTET------SQ 181
Query: 184 MVD--VNLRSTTGN------ASQSQSQSSGCSC 208
MV+ VN + N +Q+Q + G SC
Sbjct: 182 MVNSVVNHPTQPNNIILDDPQNQNQEKKDGKSC 214
>gi|307777798|dbj|BAJ21295.1| Rab-family small GTPase Rab6A [Tetrahymena thermophila]
Length = 229
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 135/170 (79%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L+KYKLVFLGDQ VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVV YD+ ++ SF N +KWI++VR ERG DVII LVG+K
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHDVIICLVGSKN 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DLV+KR V +G+ K++EL+V F E SA G N++ LFR IA LPG E
Sbjct: 131 DLVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANMLPGAE 180
>gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Trypanosoma cruzi strain CL Brener]
gi|70879437|gb|EAN92612.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 268
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 135/167 (80%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+A+ K+K+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+ +++RTVRL +WD
Sbjct: 30 AAVVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWD 89
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIR+SS +VVYD+ SR SFL T KWIDEVR ERG V+I LVGNK
Sbjct: 90 TAGQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKL 149
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
D EKR VS EE + K+ E N++F+E SAK G N+K LFRK+A ALP
Sbjct: 150 DAQEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEALP 196
>gi|303313355|ref|XP_003066689.1| Ras-related protein Rab-6A , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106351|gb|EER24544.1| Ras-related protein Rab-6A , putative [Coccidioides posadasii C735
delta SOWgp]
Length = 180
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 131/145 (90%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+++ +SF NT KW+D+VR ERG+DVIIVLVGNKTDL +KR+V+ +GE ++++ +MFI
Sbjct: 61 DISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGME 174
ETSAK G+N+K LFR+IA ALPGME
Sbjct: 121 ETSAKVGYNVKQLFRRIAQALPGME 145
>gi|118383836|ref|XP_001025072.1| Ras family protein [Tetrahymena thermophila]
gi|89306839|gb|EAS04827.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 277
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 135/170 (79%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L+KYKLVFLGDQ VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVV YD+ ++ SF N +KWI++VR ERG DVII LVG+K
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHDVIICLVGSKN 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DLV+KR V +G+ K++EL+V F E SA G N++ LFR IA LPG E
Sbjct: 131 DLVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANMLPGAE 180
>gi|410056591|ref|XP_003954065.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41 [Pan
troglodytes]
Length = 221
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L K KL+FLG+QS GKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDT
Sbjct: 28 SLCKSKLLFLGEQS-GKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 86
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ V ERG DV+I+L+GNK D
Sbjct: 87 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVXAERGDDVVIMLLGNKID 146
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
KRQV+ E+GE KSR LNVMFIETSAK G+N+K LFR++A+AL T S +E V
Sbjct: 147 FDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTV 205
Query: 186 DVNLRS--TTGNAS 197
++ L S +GN S
Sbjct: 206 EIELESFEESGNRS 219
>gi|313215908|emb|CBY37318.1| unnamed protein product [Oikopleura dioica]
Length = 478
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/137 (83%), Positives = 127/137 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYDV + SF T+KWID+VRTERG+DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDVTNINSFNQTNKWIDDVRTERGTDVIIVLVGNKT 127
Query: 125 DLVEKRQVSIEEGEAKS 141
DL +KRQVSI+EGE K+
Sbjct: 128 DLADKRQVSIDEGERKA 144
>gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
gi|134066794|emb|CAM65254.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
Length = 274
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 136/172 (79%), Gaps = 2/172 (1%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRL 60
A S++ K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++LED R VRL
Sbjct: 17 ASSSSMQKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRL 76
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
LWDTAGQERF SLIPSYIR+S+ VVVYD+ SR +F + KWIDEVR+E G DV+I+LV
Sbjct: 77 HLWDTAGQERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLV 136
Query: 121 GNKTDLV-EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK D E+R+VS EE K+ E NV+F+E SAK G NIK +FR++AAALP
Sbjct: 137 GNKVDQASERREVSAEEAMKKASECNVLFMEVSAKHGTNIKHMFRQVAAALP 188
>gi|344231005|gb|EGV62890.1| hypothetical protein CANTEDRAFT_115849 [Candida tenuis ATCC 10573]
Length = 209
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 137/168 (81%), Gaps = 3/168 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQ VGKTS+ITRFMYD FD Y ATIGIDFLSKTMYLED +T+RLQLWDT
Sbjct: 10 LRKYKIVFLGDQGVGKTSLITRFMYDTFDEQYAATIGIDFLSKTMYLEDNKTIRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS+VA++ YD+ +++SF N KWI EV+ ERG DVIIV+VGNK+D
Sbjct: 70 AGQERFRSLIPSYIRDSNVAIICYDITNKKSFDNLDKWISEVKLERGEDVIIVIVGNKSD 129
Query: 126 LVEKRQVSIEEGE--AKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
L KRQVS EE E KS E +++ETS KA NIK LF+KIA +LP
Sbjct: 130 LNNKRQVSAEELETLGKSIENCSIYLETSTKANHNIKLLFKKIAKSLP 177
>gi|145501222|ref|XP_001436593.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403734|emb|CAK69196.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 137/172 (79%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V+ L+KYKLVFLGDQSVGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLW
Sbjct: 9 VAPLSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLW 68
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDS+VAVV YDV + SF + ++WI +VR ERG+DVII +V NK
Sbjct: 69 DTAGQERFRSLIPSYIRDSAVAVVCYDVEVKTSFASITRWISDVRLERGNDVIIFIVANK 128
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
D++ +R +S EEG ++E + FIE SAK G N++ LF++IAA LPG ET
Sbjct: 129 IDVLNERVISTEEGANLAKECDAHFIEVSAKTGNNVELLFKQIAATLPGTET 180
>gi|399219055|emb|CCF75942.1| unnamed protein product [Babesia microti strain RI]
Length = 220
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 148/187 (79%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+ KYK+V LG+QS GKTSI+TRFMYD F++TYQATIGIDFLSKT+ ++ +RLQLWDT
Sbjct: 14 GIKKYKIVLLGEQSSGKTSIVTRFMYDTFESTYQATIGIDFLSKTITVKKTQLRLQLWDT 73
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSL+PSYIRDSS AV+ YD+ +R+SF NT+KWID+VR ER ++ I++LVGNKTD
Sbjct: 74 AGQERFRSLMPSYIRDSSAAVITYDITNRKSFENTTKWIDDVRRERANNAILILVGNKTD 133
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
LV+KRQVS EEGE +++ ++F ETSAK G NI +F +A +L S T E++V
Sbjct: 134 LVDKRQVSYEEGEEHAKKYGMIFQETSAKEGTNISKIFFDVAESLLDFNAGSVTIPEKLV 193
Query: 186 DVNLRST 192
D++L S+
Sbjct: 194 DIDLHSS 200
>gi|449666816|ref|XP_002162274.2| PREDICTED: ras-related protein Rab-6A-like [Hydra magnipapillata]
Length = 174
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 140/179 (78%), Gaps = 5/179 (2%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FD+TYQATIGIDFLSKTMYLEDRTVRLQ+WDTAGQERFRSLIPSYIRDSS A+VVY
Sbjct: 1 MYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQIWDTAGQERFRSLIPSYIRDSSAAIVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ + SF KWI++VR ERG DV+I+LVGNKTDL +KR++S+E+GE K++EL V+FI
Sbjct: 61 DITNTNSFAQVDKWIEDVRAERGDDVVIMLVGNKTDLTDKRRISMEQGEKKAKELGVIFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
E+SAK N+K LFR+I+A+LPG++ K +E L S + Q+ SS C+C
Sbjct: 121 ESSAKTAHNVKQLFRRISASLPGIDDKEDDKPKE-----LDSVIHPLVEKQNDSSYCTC 174
>gi|344231004|gb|EGV62889.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 260
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 137/168 (81%), Gaps = 3/168 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQ VGKTS+ITRFMYD FD Y ATIGIDFLSKTMYLED +T+RLQLWDT
Sbjct: 61 LRKYKIVFLGDQGVGKTSLITRFMYDTFDEQYAATIGIDFLSKTMYLEDNKTIRLQLWDT 120
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS+VA++ YD+ +++SF N KWI EV+ ERG DVIIV+VGNK+D
Sbjct: 121 AGQERFRSLIPSYIRDSNVAIICYDITNKKSFDNLDKWISEVKLERGEDVIIVIVGNKSD 180
Query: 126 LVEKRQVSIEEGE--AKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
L KRQVS EE E KS E +++ETS KA NIK LF+KIA +LP
Sbjct: 181 LNNKRQVSAEELETLGKSIENCSIYLETSTKANHNIKLLFKKIAKSLP 228
>gi|378732802|gb|EHY59261.1| Ras-like protein Rab-6B [Exophiala dermatitidis NIH/UT8656]
Length = 174
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 143/181 (79%), Gaps = 9/181 (4%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY
Sbjct: 1 MYDSFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-KRQVSIEEGEAKSRELNVMF 148
D++SR++F T KWID+VR ERG+DVI+VLVGNKTDL + KR+V+ ++GE +++ +F
Sbjct: 61 DISSRKTFEQTRKWIDDVRGERGNDVIVVLVGNKTDLGDSKREVTTQQGEEEAKRAGAIF 120
Query: 149 IETSAKAGFNIKPLFRKIAAALPGMETLS-STKQEEMVDVNLRSTTGNASQSQSQSSGCS 207
+ETSAK G N+K LFR+IA ALPGME+ S +M+DV++ + + GC+
Sbjct: 121 METSAKLGHNVKALFRRIAQALPGMESEGESQPNPQMIDVSI-------NNQKPAEEGCA 173
Query: 208 C 208
C
Sbjct: 174 C 174
>gi|68485957|ref|XP_713097.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46434574|gb|EAK93979.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 224
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 154/219 (70%), Gaps = 22/219 (10%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SF N KWI +V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-EKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK--- 180
L +KRQVS+++ E ++ FIETS KA N+K LF+KIA +LP S+ K
Sbjct: 129 LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPDFNQDSNDKSND 188
Query: 181 -------------QEEMVDVNLRSTTGNASQSQSQSSGC 206
Q E +D+ + +T N Q S+ C
Sbjct: 189 NNNNNNNNNNNNNQSETIDITIDNTAPNP---QGTSTCC 224
>gi|398009439|ref|XP_003857919.1| small GTP binding protein rab6-like protein [Leishmania donovani]
gi|322496122|emb|CBZ31193.1| small GTP binding protein rab6-like protein [Leishmania donovani]
Length = 274
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 136/172 (79%), Gaps = 2/172 (1%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRL 60
A S++ K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++LED R VRL
Sbjct: 17 ASSSSMQKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRL 76
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
LWDTAGQERF SLIPSYIR+S+ VVVYD+ SR +F + KWIDEVR+E G DV+I+LV
Sbjct: 77 HLWDTAGQERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLV 136
Query: 121 GNKTDLV-EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK D E+R+VS EE K+ E NV+F+E SAK G NIK +FR++AAALP
Sbjct: 137 GNKVDQASERREVSAEEAMKKAFECNVLFMEVSAKHGTNIKHMFRQVAAALP 188
>gi|407854096|gb|EKG06642.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 272
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 133/165 (80%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+K+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+ +++RTVRL +WDTA
Sbjct: 35 VVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTA 94
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIR+SS +VVYD+ SR SFL T KWIDEVR ERG V+I LVGNK D
Sbjct: 95 GQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKLDA 154
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR VS EE + K+ E N++F+E SAK G N+K LFRK+A ALP
Sbjct: 155 QEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEALP 199
>gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei]
gi|261326389|emb|CBH09349.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 230
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 137/173 (79%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + K+K+V LGDQ+VGKTS+ITRFMYD FD YQATIGIDF SKT+++ +R RL
Sbjct: 20 AETAPVVKHKIVLLGDQAVGKTSLITRFMYDTFDQQYQATIGIDFFSKTLHINNRATRLH 79
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQERFRSLIPSYIR+S+ VVVYD+ SR SFL+T KWIDEVR RG DVII LVG
Sbjct: 80 VWDTAGQERFRSLIPSYIRNSAATVVVYDITSRSSFLSTFKWIDEVRAARGDDVIIALVG 139
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK D+ EKR+VS +E + ++ E ++F+E SAK G N+K LFRK+A A+P +E
Sbjct: 140 NKCDVQEKREVSADEAQKRADENRLIFVEVSAKTGTNVKSLFRKVAEAIPVVE 192
>gi|68486004|ref|XP_713074.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46434549|gb|EAK93955.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 219
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 153/214 (71%), Gaps = 17/214 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SF N KWI +V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-EKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGME--------- 174
L +KRQVS+++ E ++ FIETS KA N+K LF+KIA +LP
Sbjct: 129 LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPDFNQDSNDKSND 188
Query: 175 --TLSSTKQEEMVDVNLRSTTGNASQSQSQSSGC 206
++ Q E +D+ + +T N Q S+ C
Sbjct: 189 NNNNNNNNQSETIDITIDNTAPNP---QGTSTCC 219
>gi|149239262|ref|XP_001525507.1| GTP-binding protein ryh1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451000|gb|EDK45256.1| GTP-binding protein ryh1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 220
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/168 (69%), Positives = 138/168 (82%), Gaps = 3/168 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY TIGIDFLSKTMYLED +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEDGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SF N +KWI +V+ ERG DVI+VLVGNK D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFTNLNKWIKDVKLERGDDVIMVLVGNKLD 128
Query: 126 LV-EKRQVSIEEGEA-KSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
L +KRQVS+E+ E ++ + FIETS KA N+K LF+KIA +LP
Sbjct: 129 LANDKRQVSLEDVEQLHNKTGSKFFIETSTKANHNVKLLFKKIAQSLP 176
>gi|407409243|gb|EKF32227.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi
marinkellei]
Length = 283
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 133/165 (80%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+K+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+ +++RTVRL +WDTA
Sbjct: 39 VVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTA 98
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIR+SS +VVYD+ SR SFL T KWIDEVR ERG V+I LVGNK+D
Sbjct: 99 GQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKSDA 158
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR VS EE + K+ E N++F+E SAK G N+K LFRK+A LP
Sbjct: 159 QEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAELLP 203
>gi|343473101|emb|CCD14917.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 231
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/167 (63%), Positives = 136/167 (81%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ +AKYK+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+++++R V L +WD
Sbjct: 25 THMAKYKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTLHVDNRAVWLHVWD 84
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIR+S+ A++VYD+ SR SFL+T W+DEVR RGSDV++ LVGNK
Sbjct: 85 TAGQERFRSLIPSYIRNSAAAIIVYDITSRVSFLSTFDWVDEVRKVRGSDVVVALVGNKC 144
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
D E+R+VS EE + K+ E ++F+E SAK G N+K LFRK+A A+P
Sbjct: 145 DAQERREVSTEEAQKKADEYCLIFVEVSAKQGTNVKSLFRKVAEAMP 191
>gi|238880071|gb|EEQ43709.1| GTP-binding protein ryh1 [Candida albicans WO-1]
Length = 218
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 153/213 (71%), Gaps = 16/213 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SF N KWI +V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-EKRQVSIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAALPGME--------- 174
L +KRQVS+++ E ++ FIETS KA N+K LF+KIA +LP
Sbjct: 129 LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPDFNQDSNDKSND 188
Query: 175 -TLSSTKQEEMVDVNLRSTTGNASQSQSQSSGC 206
++ Q E +D+ + +T N Q S+ C
Sbjct: 189 NNNNNNNQSETIDITIDNTAPNP---QGTSTCC 218
>gi|389592722|ref|XP_003721632.1| small GTP binding protein rab6-like protein [Leishmania major
strain Friedlin]
gi|321438164|emb|CBZ11916.1| small GTP binding protein rab6-like protein [Leishmania major
strain Friedlin]
Length = 274
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/168 (66%), Positives = 135/168 (80%), Gaps = 2/168 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWD 64
++ K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++L+D R VRL LWD
Sbjct: 21 SMPKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRLHLWD 80
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SLIPSYIR+S+ VVVYD+ SR +F + KWIDEVR+E G+DV+I+LVGNK
Sbjct: 81 TAGQERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGADVVIMLVGNKV 140
Query: 125 DLV-EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
D E+R+VS EE K+ E +V+F+E SAK G NIK +FR++AAALP
Sbjct: 141 DQASERREVSAEEAMKKASECSVLFMEVSAKHGTNIKHMFRQVAAALP 188
>gi|395546267|ref|XP_003775011.1| PREDICTED: ras-related protein Rab-6.1-like [Sarcophilus harrisii]
Length = 334
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/157 (70%), Positives = 131/157 (83%), Gaps = 3/157 (1%)
Query: 19 SVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
VGKTS+ITRF+YD FDN YQATIGIDFLSKTMYLEDR++RLQLWDTAGQERFRSLIPSY
Sbjct: 34 PVGKTSLITRFVYDSFDNNYQATIGIDFLSKTMYLEDRSIRLQLWDTAGQERFRSLIPSY 93
Query: 79 IRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGE 138
IRDS+VA++VYD+ + +F T++WI EVRTERG D+II+LVGNK DL KR+VS EEG+
Sbjct: 94 IRDSTVAIIVYDITNINTFYQTTRWIREVRTERGGDIIIMLVGNKNDLGHKREVSPEEGK 153
Query: 139 AKSRELNVMFIETSAKAGFNIKPL---FRKIAAALPG 172
K+++LNVMFIETSAK G+N+K R AA PG
Sbjct: 154 QKAKDLNVMFIETSAKTGYNVKQASDRLRVRAARKPG 190
>gi|328354607|emb|CCA41004.1| GTP-binding protein YPT6 [Komagataella pastoris CBS 7435]
Length = 250
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 143/195 (73%), Gaps = 8/195 (4%)
Query: 13 VFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 72
VFLGDQ VGKTS+ITRFMYD F++ Y AT+GIDFLSKT+YL+D+TVRLQLWDTAGQERFR
Sbjct: 56 VFLGDQGVGKTSLITRFMYDTFNDHYAATVGIDFLSKTLYLDDKTVRLQLWDTAGQERFR 115
Query: 73 SLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQV 132
SL+PSYIRDS+VA++VYD S+ SF + KW D+VR ERG +VII LV NK DL ++R +
Sbjct: 116 SLVPSYIRDSNVAIIVYDTTSKSSFQSVDKWCDDVRNERGENVIICLVANKADLADQRVI 175
Query: 133 SIEEGEAKSRELNV-MFIETSAKAGFNIKPLFRKIAAAL------PGMETLSSTKQEEMV 185
S E+GE K+ L V +FIETS K G+N+K LFRK+A L PG + EM+
Sbjct: 176 STEDGEKKATGLKVDLFIETSTKKGYNVKNLFRKVAKTLLEQDGSPGQDPKIDNDGVEMI 235
Query: 186 DVNLRSTTGNASQSQ 200
D+ + N SQ Q
Sbjct: 236 DL-AEANVENESQCQ 249
>gi|401414254|ref|XP_003871625.1| small GTP binding protein rab6-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487843|emb|CBZ23087.1| small GTP binding protein rab6-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 274
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 131/165 (79%), Gaps = 2/165 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++L+D R VRL LWDTAG
Sbjct: 24 KHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRLHLWDTAG 83
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QERF SLIPSYIR+S+ VVVYD+ SR +F + KWIDEVR+E G DV+I+LVGNK D
Sbjct: 84 QERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLVGNKVDQA 143
Query: 128 -EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
E+R+VS EE K+ E NV+F E SAK G NIK +FR++AAALP
Sbjct: 144 SERREVSAEEAMKKATECNVLFTEVSAKHGTNIKHMFRQVAAALP 188
>gi|68063329|ref|XP_673670.1| rab6 [Plasmodium berghei strain ANKA]
gi|56491691|emb|CAI01585.1| rab6, putative [Plasmodium berghei]
Length = 176
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 137/179 (76%), Gaps = 3/179 (1%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A+VVY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ +RQSF NT+KWI ++ ERG DVIIVLVGNKTDL + R+V+ EEG K++E N MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTDLADLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAG NIK LF+KIAA LP +E ++ + +VD+ L + N ++ S C C
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLPNLEN-NNNHEANVVDIQLTNDMNN--NEKNMLSKCLC 176
>gi|326477305|gb|EGE01315.1| rab6 [Trichophyton equinum CBS 127.97]
Length = 203
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 150/204 (73%), Gaps = 12/204 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+IT FMYD T + FLS EDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITGFMYDS-STTRTSNYRNGFLS-----EDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAVVVYD+++ +SF NT KW+D+VR ERG+DVII LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 125
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KR+V+ E+GE ++++ +MFIETSAK G N+K LF+KIA ALPGME + +M
Sbjct: 126 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGETPNSDNQM 185
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+DV++ T + C+C
Sbjct: 186 IDVSINPT------KPVSNDACAC 203
>gi|297304080|ref|XP_002808583.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41-like
[Macaca mulatta]
Length = 228
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 146/199 (73%), Gaps = 9/199 (4%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ-----ATIGIDFLSKTMYLEDRTVRL 60
+L K KL+FLG+ S GKTS+ITRFMY+ F Q + IDFLSKTMYLED+ V+L
Sbjct: 28 SLCKSKLLFLGEPS-GKTSVITRFMYNSFGCACQVSPSPSNCXIDFLSKTMYLEDQIVQL 86
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
QLWDTAGQERF SLIPSYIRDS++AVVVYD+ + SF T KW++ VR ERG DV+I+LV
Sbjct: 87 QLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNISSFKETDKWVEHVRAERGDDVVIMLV 146
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNK DL KRQV+ EEGE KSR LNVMFIETSAK G+N+K LFR++ +AL TL K
Sbjct: 147 GNKIDLDNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVVSALLSTRTLPPPK 206
Query: 181 QEEMVDVNLRS--TTGNAS 197
E V++ L S +GN S
Sbjct: 207 -EGTVEIELESFEESGNRS 224
>gi|221042816|dbj|BAH13085.1| unnamed protein product [Homo sapiens]
Length = 144
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/139 (76%), Positives = 125/139 (89%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTE
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAAL
Sbjct: 61 RGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 120
Query: 171 PGMETLSSTKQEEMVDVNL 189
PGME+ +E+M+D+ L
Sbjct: 121 PGMESTQDRSREDMIDIKL 139
>gi|307949535|gb|ADN96603.1| Rab GTPase 6 [Euplotes octocarinatus]
Length = 220
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 145/205 (70%), Gaps = 3/205 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+A KYK+VFLGDQSV KTSII RFM+D FD YQATIGIDFLSK M ++D+ VRLQLWD
Sbjct: 15 TAPVKYKVVFLGDQSVCKTSIILRFMHDTFDPNYQATIGIDFLSKAMVVDDKMVRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF+SLIPSYI+DSS A+V YD+ S+Q+F + W+D+ R RG +V I++VGNK
Sbjct: 75 TAGQERFKSLIPSYIQDSSFAIVCYDITSKQTFEHVKTWVDDARNIRGDNVSIIIVGNKI 134
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL E+R+V EEG+ + EL V FIE SAKAG NIK LF+ +A+ LPG E + ++
Sbjct: 135 DLAEQREVYTEEGKKLADELGVSFIEASAKAGINIKALFKTLASNLPGNENGKTKGKDAG 194
Query: 185 VDVNLRSTTGNASQSQSQSS---GC 206
V + N + +++ GC
Sbjct: 195 VQLKKEEKDKNDNDEDAKTKKKPGC 219
>gi|156099119|ref|XP_001615562.1| small GTPase Rab6 [Plasmodium vivax Sal-1]
gi|148804436|gb|EDL45835.1| small GTPase Rab6, putative [Plasmodium vivax]
Length = 176
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 137/179 (76%), Gaps = 3/179 (1%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A+VVY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ +RQSF NT+KWI ++ ERG DVII LVGNKTDL + R+V+ EEG K++E N MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAG NIK LF+KIAA LP ++ S++ +VD+ L T A+ ++ S C C
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLPNLDN-SNSNDANVVDIQL--TNNAAANEKNMLSKCMC 176
>gi|221056628|ref|XP_002259452.1| rab6 [Plasmodium knowlesi strain H]
gi|193809523|emb|CAQ40225.1| rab6, putative [Plasmodium knowlesi strain H]
Length = 176
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 137/179 (76%), Gaps = 3/179 (1%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A+VVY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ +RQSF NT+KWI ++ ERG DVII LVGNKTDL + R+V+ EEG K++E N MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAG NIK LF+KIAA LP ++ S++ +VD+ L + G + ++ S C C
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLPNLDN-SNSNDANVVDIQLTNNGG--ANDKNILSKCMC 176
>gi|115451265|ref|NP_001049233.1| Os03g0191400 [Oryza sativa Japonica Group]
gi|113547704|dbj|BAF11147.1| Os03g0191400 [Oryza sativa Japonica Group]
gi|125585227|gb|EAZ25891.1| hypothetical protein OsJ_09728 [Oryza sativa Japonica Group]
Length = 189
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 147/215 (68%), Gaps = 33/215 (15%)
Query: 1 MAPV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
MAPV SALAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQ G + + L+ +
Sbjct: 1 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQ---GYSWAGEVPELDPK--- 54
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
L G + R RQSFL+ SKWI+EV T+RG DVIIVL
Sbjct: 55 LHQGFFCGSDCLRY--------------------RQSFLSISKWIEEVNTQRGGDVIIVL 94
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDLV+KRQ+S +EGEAK++E MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS
Sbjct: 95 VGNKTDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSA 154
Query: 180 KQEEMVDVNLRST------TGNASQSQSQSSGCSC 208
KQE+MVD+NLR +G +Q + ++ GCSC
Sbjct: 155 KQEDMVDINLRPAASGQIPSGAEAQEEQKAGGCSC 189
>gi|340500026|gb|EGR26932.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 227
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 136/170 (80%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L+KYKLVFLGDQ+VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLSKYKLVFLGDQAVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+ YD+ ++ SF N +KW+++VR ERG +VII LVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVICYDITNKSSFENITKWVEDVRAERGQEVIICLVGNKT 130
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
D+ +KR + +E + K++EL+V F E SA +G NI+ LF+ I LPG E
Sbjct: 131 DMQDKRAIQQQEAQQKAKELDVKFFEVSALSGDNIQQLFKAIGGMLPGAE 180
>gi|344303734|gb|EGW33983.1| hypothetical protein SPAPADRAFT_59389 [Spathaspora passalidarum
NRRL Y-27907]
Length = 209
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/156 (71%), Positives = 130/156 (83%), Gaps = 3/156 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 10 LRKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAV+ YD+ +++SFLN KWI +V+ ERG DVIIVLVGNK+D
Sbjct: 70 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFLNLDKWIKDVKLERGDDVIIVLVGNKSD 129
Query: 126 LV-EKRQVSIEEGEAKSREL-NVMFIETSAKAGFNI 159
L +KRQVS+E+ E ++ + FIETS KA NI
Sbjct: 130 LANDKRQVSVEDVEQLHNKIGSKFFIETSTKANHNI 165
>gi|302665614|ref|XP_003024416.1| hypothetical protein TRV_01379 [Trichophyton verrucosum HKI 0517]
gi|291188469|gb|EFE43805.1| hypothetical protein TRV_01379 [Trichophyton verrucosum HKI 0517]
Length = 176
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 130/157 (82%), Gaps = 12/157 (7%)
Query: 18 QSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 77
++VGKTS+ITRFMYD FDNTYQATIGIDFLSK LWDTAGQERFRSLIPS
Sbjct: 14 ETVGKTSLITRFMYDSFDNTYQATIGIDFLSK------------LWDTAGQERFRSLIPS 61
Query: 78 YIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEG 137
YI++S+VAVVVYD+++ +SF NT KW+D+VR ERG+DVII LVGNKTDL +KR+V+ E+G
Sbjct: 62 YIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKTDLNDKREVTTEQG 121
Query: 138 EAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
E ++++ +MFIETSAK G N+K LF+KIA ALPGME
Sbjct: 122 EEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGME 158
>gi|300121531|emb|CBK22050.2| unnamed protein product [Blastocystis hominis]
Length = 298
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 132/169 (78%), Gaps = 1/169 (0%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V + +YK VFLGD GKTSIITRF+YD FD TYQ+TIGIDFLSKT+ +R +R+QLW
Sbjct: 63 VKSSERYKFVFLGDAGTGKTSIITRFIYDSFDPTYQSTIGIDFLSKTILYNNRPIRMQLW 122
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQERF+SLIPSYIRDSSVAV+VYD++SR SF N KW+ +VR +R +VI+V+VGNK
Sbjct: 123 DTAGQERFQSLIPSYIRDSSVAVIVYDISSRSSFDNVMKWVRDVRDQR-DEVILVIVGNK 181
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
TDL + R V+IEEG+ + + N MF E+SAK +NI +FRK+ LPG
Sbjct: 182 TDLSDSRAVTIEEGQKLAEDNNAMFFESSAKCNYNIDTVFRKVVEKLPG 230
>gi|349803423|gb|AEQ17184.1| putative rab6a member ras oncogene family [Pipa carvalhoi]
Length = 126
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 117/126 (92%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 1 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 60
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 61 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 120
Query: 125 DLVEKR 130
DL +KR
Sbjct: 121 DLADKR 126
>gi|340960873|gb|EGS22054.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 213
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 145/209 (69%), Gaps = 13/209 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKT---MYLEDRTVRLQ 61
+ L K+KLVFLG+QS G I + NT D T MYLEDRTVRLQ
Sbjct: 13 NPLKKFKLVFLGEQS-GMRHCIRQDDIGASTNTIAPNSWQDLAHHTLHTMYLEDRTVRLQ 71
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVG
Sbjct: 72 LWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFENTRKWIDDVRAERGNDVIIVLVG 131
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL +KR+V+ ++GE ++R ++MFIETSAK G N+K LF++IA ALPGME + Q
Sbjct: 132 NKTDLADKREVTTQQGEEEARRQDLMFIETSAKLGHNVKTLFKRIAQALPGMEGTDAAAQ 191
Query: 182 --EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DV +T + GC+C
Sbjct: 192 ASSQMIDVKTPATP-------APQEGCAC 213
>gi|384487253|gb|EIE79433.1| GTP-binding protein ryh1 [Rhizopus delemar RA 99-880]
Length = 153
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 132/160 (82%), Gaps = 9/160 (5%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLED+TVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD+++RQSF NTSKWID+VR E
Sbjct: 1 MYLEDKTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDISNRQSFTNTSKWIDDVRAE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNK+DL +KR+V+ ++GE +++ELNVMFIETSAKAG N+K LF+KIA +L
Sbjct: 61 RGDDVIIVLVGNKSDLSDKREVTTDDGEKRAKELNVMFIETSAKAGHNVKTLFKKIAQSL 120
Query: 171 PGME--TLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PG++ + S ++ M VNL +T +S +S C+C
Sbjct: 121 PGVDGSAIQSDSKDSMQKVNLNNT-------ESNTSSCAC 153
>gi|70948028|ref|XP_743573.1| rab6 [Plasmodium chabaudi chabaudi]
gi|56523134|emb|CAH77100.1| rab6, putative [Plasmodium chabaudi chabaudi]
Length = 175
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 135/179 (75%), Gaps = 4/179 (2%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A+VVY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ +RQSF NT+KWI ++ ERG DVIIVLVGNKTDL + R+V+ EEG K++E N MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTDLADLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETSAKAG NIK LF+KIAA LP ++ + +VD+ L T + ++ + C C
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLP-NLENNNNNEANVVDIQL---TNDMDNDKNMLNKCLC 175
>gi|403352976|gb|EJY76019.1| Rab6, RAB family GTPase [Oxytricha trifallax]
Length = 221
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 139/189 (73%), Gaps = 3/189 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYK+VFLGDQSVGKTSII RF+YD FD YQATIGIDF+S MY+ED+ + L LWDTAGQ
Sbjct: 15 KYKVVFLGDQSVGKTSIIHRFIYDSFDENYQATIGIDFMSHKMYVEDKIIILNLWDTAGQ 74
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERF+SLIPSYI+DS+VA+VV+D+ SRQSF + KWI++ + R DV+++L GNK DL +
Sbjct: 75 ERFKSLIPSYIKDSAVAIVVFDITSRQSFQSVDKWIEDAKNLRDDDVLLILAGNKADLAD 134
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
+RQVS EE + + N+M+ E SA+AG NI F ++A L G+ET + +Q E+ +
Sbjct: 135 QRQVSYEEATDYAAKRNIMYFEVSARAGTNITMCFNQLAKKLTGIET-NPIQQSEIKNTG 193
Query: 189 --LRSTTGN 195
L +GN
Sbjct: 194 FTLNQPSGN 202
>gi|340505433|gb|EGR31760.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 223
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 134/174 (77%), Gaps = 5/174 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYKLVF+GDQSVGK+SII RFMYD F T Q T+GIDF++KT++LE++T+RLQLWDTAGQ
Sbjct: 12 KYKLVFIGDQSVGKSSIINRFMYDNFTGTQQPTVGIDFVAKTLHLENKTIRLQLWDTAGQ 71
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSYIRDS ++VYD + SF N +KW+D VR ERG DV+IVL+ NK DL +
Sbjct: 72 ERFRSLIPSYIRDSDAGIIVYDTTNLSSFQNLNKWLDYVREERGKDVLIVLLANKIDLAD 131
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
+RQVS E+G + E ++F E SAK G NI+ +F++I+ +L LSS KQ+
Sbjct: 132 QRQVSTEDGNKFATEQGLLFFEVSAKDGNNIQNVFKQISYSL-----LSSDKQD 180
>gi|384491008|gb|EIE82204.1| hypothetical protein RO3G_06909 [Rhizopus delemar RA 99-880]
Length = 154
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 133/161 (82%), Gaps = 10/161 (6%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MY+E++TVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++S+ +FLNT+KWID+VR E
Sbjct: 1 MYVEEKTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDISSKSTFLNTTKWIDDVRAE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG++ I+VLVGNKTDL EKR+V+ EEGE +++ELNVMFIETSAKAG N+K LFR+IA AL
Sbjct: 61 RGTEAIVVLVGNKTDLNEKREVTTEEGEKRAKELNVMFIETSAKAGHNVKSLFRRIAQAL 120
Query: 171 PGMETLSS---TKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PG S +++++M VNL + S S+++GC+C
Sbjct: 121 PGNNGYSQSIVSEKDQMQKVNL-------NNSGSEATGCAC 154
>gi|170036653|ref|XP_001846177.1| trypsin [Culex quinquefasciatus]
gi|167879490|gb|EDS42873.1| trypsin [Culex quinquefasciatus]
Length = 283
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/133 (77%), Positives = 119/133 (89%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTE
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RGSDVII+LVGNKTDL +KRQVS EEGE K++ELNVMFIETSAKAG+N+K LFR++AAAL
Sbjct: 61 RGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 120
Query: 171 PGMETLSSTKQEE 183
PGM++ + E+
Sbjct: 121 PGMDSTENKPPED 133
>gi|345314089|ref|XP_001515936.2| PREDICTED: ras-related protein Rab-6A-like, partial
[Ornithorhynchus anatinus]
Length = 147
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/152 (69%), Positives = 124/152 (81%), Gaps = 6/152 (3%)
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
+RLQLWDTAGQERFRSLIPSYIRDS+ AVVVYD+ + SF T+KWID+VRTERGSDVII
Sbjct: 1 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 60
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+
Sbjct: 61 MLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESSQ 120
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQS-SGCSC 208
+E+M+D+ L Q Q S GCSC
Sbjct: 121 DKSREDMIDIKLEK-----PQEQPVSEGGCSC 147
>gi|154303651|ref|XP_001552232.1| GTP-binding protein [Botryotinia fuckeliana B05.10]
Length = 152
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/159 (65%), Positives = 127/159 (79%), Gaps = 8/159 (5%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++R+SF NT KW+D+VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNRKSFQNTRKWVDDVRGE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG+DVIIVLVGNKTDL +KR+V+ EGE ++++ N+MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTSEGEEEAKKNNLMFIETSAKLGHNVKTLFRRIAQAL 120
Query: 171 PGMETL-SSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PGME ++ +M+DVN+ T N GC+C
Sbjct: 121 PGMEGADNAATPNQMIDVNVNPTPAN-------QEGCAC 152
>gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila]
gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777802|dbj|BAJ21297.1| Rab-family small GTPase Rab6B [Tetrahymena thermophila]
Length = 227
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+ K+K+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ ++++T+RLQLWDT
Sbjct: 8 PVVKFKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTLQMDNKTLRLQLWDT 67
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF+SLIPSYIRDS+ A++VYD+ ++ SF N +KW++EV+ ERG++ I ++GNK+D
Sbjct: 68 AGQERFKSLIPSYIRDSNAAIIVYDITNQNSFSNVTKWVEEVKEERGNNAFIFILGNKSD 127
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L E R+VS+EEG+AK+++ + F E SAK G NI F+ ++ L G + + Q+
Sbjct: 128 L-EDRKVSLEEGQAKAKQFGLNFCEVSAKTGQNISSFFKNLSMTLSGGNSNETPNQQLQT 186
Query: 186 D 186
D
Sbjct: 187 D 187
>gi|429328144|gb|AFZ79904.1| Ras-related rab6 small GTP-binding protein, putative [Babesia equi]
Length = 224
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 140/188 (74%), Gaps = 9/188 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+QS GKTSI+TRF+YD F Y ATIGIDFLSKT+ +T+RLQLWDTAGQ
Sbjct: 12 RNKIVLLGEQSAGKTSIVTRFVYDHFIPAYAATIGIDFLSKTVTANGKTMRLQLWDTAGQ 71
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSL+PSYIRDSS A+VVYD+ +R SF T +W+ E++ RG +IV+VGNKTDL++
Sbjct: 72 ERFRSLMPSYIRDSSAAIVVYDITNRDSFTRTKQWVQEIKDMRGDKAVIVIVGNKTDLLD 131
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE----EM 184
KR+VS EEGE+ ++E+N +F ETSAK G N+ LF +A L L +T+ E ++
Sbjct: 132 KRKVSYEEGESHAKEMNCLFRETSAKNGDNVHELFNLVAVKL-----LKTTEPEPVSDKL 186
Query: 185 VDVNLRST 192
VD++L+ +
Sbjct: 187 VDIDLKPS 194
>gi|407920188|gb|EKG13405.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 152
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/158 (64%), Positives = 125/158 (79%), Gaps = 6/158 (3%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++R+SF NT KW+D+VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNRKSFENTRKWVDDVRGE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG+DVIIVLVGNKTDL +KR+V+ +GE ++++ N+MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNNLMFIETSAKLGHNVKTLFRRIAQAL 120
Query: 171 PGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PGME + +M+DVN+ Q GC+C
Sbjct: 121 PGMEGENQQNPSQMIDVNVNPNPPEEGQ------GCAC 152
>gi|328873768|gb|EGG22134.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 175
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 144/206 (69%), Gaps = 32/206 (15%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+ +L+KYKLVFLGDQSVGK I I LS+
Sbjct: 1 MESLSKYKLVFLGDQSVGKVRWI-----------------IPLLSQ-------------- 29
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
D +GQERFRSLIPSYIRDSSVA+VVYD+ ++ SFLNT KWI++VR+ERG++V+I+LVGNK
Sbjct: 30 DLSGQERFRSLIPSYIRDSSVAIVVYDITNKNSFLNTIKWIEDVRSERGNNVVIMLVGNK 89
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
TDL +KRQVSIEEGEAK++E +MF ETSAKAGFNIK LFRK+A+ALPG++T S K E
Sbjct: 90 TDLADKRQVSIEEGEAKAKEYEIMFTETSAKAGFNIKALFRKVASALPGIDTNSIAKSAE 149
Query: 184 MVDVNL-RSTTGNASQSQSQSSGCSC 208
M ++++ +S N + S+S GC C
Sbjct: 150 MNEIDIAQSDKNNKGVTTSESGGCRC 175
>gi|406601670|emb|CCH46723.1| Guanine nucleotide-binding protein subunit beta 2 [Wickerhamomyces
ciferrii]
Length = 1045
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 100/172 (58%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FD+ Y ATIGIDFLSKTMYL+D+TVRLQLWDTAGQERFRSLIPSYIRDS VAV+VY
Sbjct: 1 MYDTFDDNYAATIGIDFLSKTMYLDDKTVRLQLWDTAGQERFRSLIPSYIRDSHVAVIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNV-MF 148
D+ S++SF KWI++V+ ER +V++ LVGNK DL +KRQVS+E+GEAK++EL+ +F
Sbjct: 61 DITSKKSFELVDKWIEDVKAERSENVVLCLVGNKNDLADKRQVSLEDGEAKAKELSCSIF 120
Query: 149 IETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQ 200
IETS K G+N+K +F+K+A +LP E +++ E + + T + + S+
Sbjct: 121 IETSTKLGYNVKNMFKKVAKSLPEFEESKNSQPEGEIPIRSVVTKNDVTPSK 172
>gi|125542724|gb|EAY88863.1| hypothetical protein OsI_10338 [Oryza sativa Indica Group]
Length = 203
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 149/216 (68%), Gaps = 21/216 (9%)
Query: 1 MAPV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVR 59
MAPV SALAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQ G + + L+ +
Sbjct: 1 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQ---GYSWAGEVPELDPK--- 54
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVV-VYDVASRQSFLNTSKWIDEVRTERGSDVIIV 118
L G + R D V + QSFL+ SKWI+EV T+RG DVIIV
Sbjct: 55 LHQGFFCGSDCLRC-------DWQVNFIYTLFSLLLQSFLSISKWIEEVNTQRGGDVIIV 107
Query: 119 LVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
LVGNKTDLV+KRQ+S +EGEAK++E MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS
Sbjct: 108 LVGNKTDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSS 167
Query: 179 TKQEEMVDVNLRST------TGNASQSQSQSSGCSC 208
KQE+MVD+NLR +G +Q + ++ GCSC
Sbjct: 168 AKQEDMVDINLRPAASGQIPSGAEAQEEQKAGGCSC 203
>gi|242818601|ref|XP_002487150.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713615|gb|EED13039.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 152
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/158 (64%), Positives = 128/158 (81%), Gaps = 6/158 (3%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWVDDVRGE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG+DVIIVLVGNKTDL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PGME + + +M+DVN+ N SQ + + GC+C
Sbjct: 121 PGMEGEAQRGENQMIDVNI-----NPSQP-TNNDGCAC 152
>gi|340502549|gb|EGR29228.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 219
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 146/208 (70%), Gaps = 11/208 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYK+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ L+++T+RLQLWDTAGQ
Sbjct: 12 KYKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTLTLDNKTLRLQLWDTAGQ 71
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERF+SLIPSYIRDS+ A++VYDV ++ SF N +KWI+EV+ ERG+D +I ++GNK DL E
Sbjct: 72 ERFKSLIPSYIRDSNAAIIVYDVTNQASFNNLTKWIEEVKEERGNDALIFVLGNKADL-E 130
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG----------METLSS 178
R+VS EE + + ++ N+ E SAK+G NI F+++A +L G ++ S
Sbjct: 131 DRKVSAEECQQQLKQFNLKLQEVSAKSGQNIGTFFKQLAQSLSGGQSNENQSKPGQSQQS 190
Query: 179 TKQEEMVDVNLRSTTGNASQSQSQSSGC 206
+++ + L++ N + + SGC
Sbjct: 191 EGEKDKQPITLKNQKNNGQEKEKNKSGC 218
>gi|312373514|gb|EFR21237.1| hypothetical protein AND_17346 [Anopheles darlingi]
Length = 194
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/121 (85%), Positives = 111/121 (91%)
Query: 36 NTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQ 95
N QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ +
Sbjct: 31 NIVQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNAN 90
Query: 96 SFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKA 155
SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQVS EEGE K++ELNVMFIETSAKA
Sbjct: 91 SFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKA 150
Query: 156 G 156
G
Sbjct: 151 G 151
>gi|403222371|dbj|BAM40503.1| small GTP binding protein rab6 [Theileria orientalis strain
Shintoku]
Length = 222
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 146/199 (73%), Gaps = 9/199 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+QS GKTSI+TRF+YD + Y ATIGIDFLSK + + RT+RLQLWDTAGQ
Sbjct: 14 RNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQRTMRLQLWDTAGQ 73
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSL+PSYIRDSS A+VVYD+ +R+SF T WI +++ RG +IV+VGNKTDL++
Sbjct: 74 ERFRSLMPSYIRDSSSAIVVYDITNRESFERTRNWIKDIKDMRGDKAVIVVVGNKTDLLD 133
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEEMVDV 187
KR VS EEGE+ ++E+N F ETSAK G N++ LF +A+ L ++T+ + +VD+
Sbjct: 134 KRTVSFEEGESLAKEMNCFFRETSAKNGDNVQELFTLVASEL--LKTIEPEPVNDRLVDI 191
Query: 188 NLRSTTGNASQSQSQSSGC 206
+LR + + S+++GC
Sbjct: 192 DLRPS------APSENTGC 204
>gi|320036381|gb|EFW18320.1| rab6 [Coccidioides posadasii str. Silveira]
Length = 152
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/158 (64%), Positives = 128/158 (81%), Gaps = 6/158 (3%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG+DVIIVLVGNKTDL +KR+V+ +GE ++++ +MFIETSAK G+N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PGME + +M+DVN+ N +Q S + GC+C
Sbjct: 121 PGMEGEAGRGDNQMIDVNI-----NPTQPVS-NEGCAC 152
>gi|115388191|ref|XP_001211601.1| GTP-binding protein ryh1 [Aspergillus terreus NIH2624]
gi|114195685|gb|EAU37385.1| GTP-binding protein ryh1 [Aspergillus terreus NIH2624]
Length = 151
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 11/160 (6%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG+DVIIVLVGNKTDL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEEMVDVNL--RSTTGNASQSQSQSSGCSC 208
PGME + +Q +M+DVN+ + TT N GC+C
Sbjct: 121 PGMEG-EANQQNQMIDVNINPKETTSN--------DGCAC 151
>gi|340052328|emb|CCC46604.1| putative small GTP-binding protein RAB6 [Trypanosoma vivax Y486]
Length = 223
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 130/176 (73%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+YK+V LGDQSVGKTSIITRF+ F+ +Y ATIGIDF SKT+ L+ TVRL +WDTAGQ
Sbjct: 10 RYKVVLLGDQSVGKTSIITRFINGTFEESYHATIGIDFFSKTLLLDGVTVRLHVWDTAGQ 69
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFR+LIP YIRDS+ +VVYDVASR SFLNT KW+D+VR RG++ IIVLVGNK+D E
Sbjct: 70 ERFRALIPGYIRDSAATLVVYDVASRLSFLNTFKWVDDVRALRGNETIIVLVGNKSDEHE 129
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
+R+V+ EE + K+ E +MF E SA G + LF+K+A L E S K E+
Sbjct: 130 RREVTAEEAQEKADEYGIMFTEVSAMLGTGVGALFKKVAETLVLAEGTVSNKTVEV 185
>gi|281343000|gb|EFB18584.1| hypothetical protein PANDA_013372 [Ailuropoda melanoleuca]
Length = 123
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 99/123 (80%), Positives = 114/123 (92%)
Query: 40 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLN 99
ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF
Sbjct: 1 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQ 60
Query: 100 TSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNI 159
TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+
Sbjct: 61 TSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNV 120
Query: 160 KPL 162
K +
Sbjct: 121 KQV 123
>gi|443898918|dbj|GAC76251.1| cAMP-dependent protein kinase catalytic subunit [Pseudozyma
antarctica T-34]
Length = 2447
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 131/193 (67%), Gaps = 38/193 (19%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
+LVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER
Sbjct: 8 QLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 67
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKW--IDEVRTERGSDVI------------ 116
FRSLIPSYIRDSSVAVVVYD+ TSKW R RG ++
Sbjct: 68 FRSLIPSYIRDSSVAVVVYDI--------TSKWPRPQAQRQRRGVELTRWENRPGLVPEH 119
Query: 117 IVLVGNKTDLVEKRQ----------------VSIEEGEAKSRELNVMFIETSAKAGFNIK 160
I + G + +R+ V+ EE E K++E NVMFIETSAKAG N+K
Sbjct: 120 IEMGGRRACGARQRRDHRARGQQDGSERQEVVTTEEAEQKAQEFNVMFIETSAKAGHNVK 179
Query: 161 PLFRKIAAALPGM 173
LF+KIA ALPGM
Sbjct: 180 VLFKKIAQALPGM 192
>gi|307777800|dbj|BAJ21296.1| Rab-family small GTPase Rab6C [Tetrahymena thermophila]
Length = 224
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 146/219 (66%), Gaps = 21/219 (9%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYKLVF+GDQSVGKTSII RF+ D F T Q T+GIDF++KT++L+++T+RLQLWDTA
Sbjct: 10 VKKYKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A++VYD+ ++ SF + +KW+D VR ERG V+IVL+ NK DL
Sbjct: 70 GQERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDYVREERGDGVLIVLLANKLDL 129
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
++R V +G+ +++ N++F E SAK G NI +F+ +A L G E + Q +M D
Sbjct: 130 PDQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFKNLAQLLQGSE---KSDQTDM-D 185
Query: 187 VNLR-----------------STTGNASQSQSQSSGCSC 208
+ ++ ST +A Q+Q C C
Sbjct: 186 LGIKGAANNSKCTTAGGTIQLSTNQDAPVKQTQDKQCQC 224
>gi|229594060|ref|XP_001025689.3| Ras family protein [Tetrahymena thermophila]
gi|225567120|gb|EAS05444.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 225
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 140/192 (72%), Gaps = 4/192 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYKLVF+GDQSVGKTSII RF+ D F T Q T+GIDF++KT++L+++T+RLQLWDTA
Sbjct: 10 VKKYKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A++VYD+ ++ SF + +KW+D VR ERG V+IVL+ NK DL
Sbjct: 70 GQERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDYVREERGDGVLIVLLANKLDL 129
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
++R V +G+ +++ N++F E SAK G NI +F+ +A L G E + Q +M D
Sbjct: 130 PDQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFKNLAQLLQGSE---KSDQTDM-D 185
Query: 187 VNLRSTTGNASQ 198
+ ++ N S+
Sbjct: 186 LGIKGAASNNSK 197
>gi|323308000|gb|EGA61255.1| Ypt6p [Saccharomyces cerevisiae FostersO]
Length = 185
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 135/188 (71%), Gaps = 12/188 (6%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDTAGQERFRSLIPSYIRDS VA++VY
Sbjct: 1 MYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKTDLVEKRQVSIEEGEAKSRELNV-M 147
D+ R+SF KWI++V+ ERG + VI+ +VGNK+DL ++RQ+S EEGE K++ L +
Sbjct: 61 DITKRKSFEYIDKWIEDVKNERGDENVIVCIVGNKSDLSDERQISTEEGEKKAKLLGAKI 120
Query: 148 FIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGN-------ASQSQ 200
F+ETS KAG+N+K LF+KIA +LP + ST + N S N ++ +
Sbjct: 121 FMETSTKAGYNVKALFKKIAKSLPEFQNSESTP---LDSENANSANQNKPGVIDISTAEE 177
Query: 201 SQSSGCSC 208
+ S C C
Sbjct: 178 QEQSACQC 185
>gi|116194366|ref|XP_001222995.1| hypothetical protein CHGG_03781 [Chaetomium globosum CBS 148.51]
gi|88179694|gb|EAQ87162.1| hypothetical protein CHGG_03781 [Chaetomium globosum CBS 148.51]
Length = 153
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 126/160 (78%), Gaps = 9/160 (5%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG+DVIIVLVGNKTDL +KR+V+ ++GE +++ N+MF+ETSAK G N+K LF++IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTQQGEDEAKRNNLMFVETSAKLGHNVKTLFKRIAQAL 120
Query: 171 PGMETLSSTKQ--EEMVDVNLRSTTGNASQSQSQSSGCSC 208
PGME + Q +M+DV + + +Q GC+C
Sbjct: 121 PGMEGADAVAQAANQMIDVKTPA-------APAQQEGCAC 153
>gi|323303807|gb|EGA57590.1| Ypt6p [Saccharomyces cerevisiae FostersB]
gi|323332365|gb|EGA73774.1| Ypt6p [Saccharomyces cerevisiae AWRI796]
gi|323336508|gb|EGA77775.1| Ypt6p [Saccharomyces cerevisiae Vin13]
gi|323347457|gb|EGA81728.1| Ypt6p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764092|gb|EHN05617.1| Ypt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 185
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 135/188 (71%), Gaps = 12/188 (6%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLWDTAGQERFRSLIPSYIRDS VA++VY
Sbjct: 1 MYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNKTDLVEKRQVSIEEGEAKSRELNV-M 147
D+ R+SF KWI++V+ ERG + VI+ +VGNK+DL ++RQ+S EEGE K++ L +
Sbjct: 61 DITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKI 120
Query: 148 FIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGN-------ASQSQ 200
F+ETS KAG+N+K LF+KIA +LP + ST + N S N ++ +
Sbjct: 121 FMETSTKAGYNVKALFKKIAKSLPEFQNSESTP---LDSENANSANQNKPGVIDISTAEE 177
Query: 201 SQSSGCSC 208
+ S C C
Sbjct: 178 QEQSACQC 185
>gi|401884254|gb|EJT48423.1| hypothetical protein A1Q1_02555 [Trichosporon asahii var. asahii
CBS 2479]
gi|406695853|gb|EKC99152.1| hypothetical protein A1Q2_06556 [Trichosporon asahii var. asahii
CBS 8904]
Length = 202
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 141/211 (66%), Gaps = 34/211 (16%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFM----YDKFDNTYQA---TIGIDFLSKTMYLEDRT 57
S L K+KLVFLG+QSVGKTS+ITRF+ + D +A T GIDFLSKTMYLEDRT
Sbjct: 19 SPLKKFKLVFLGEQSVGKTSLITRFVSLPGQARADTPARAPTLTAGIDFLSKTMYLEDRT 78
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
VRLQLWDTAGQ + D R SFLNT+KW+D+VR ERG DVII
Sbjct: 79 VRLQLWDTAGQ------------------LTTD---RNSFLNTTKWVDDVRNERGDDVII 117
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
VLVGNKTDL +KRQV+ E+ + +++EL VM IETSAKAG N+K LF+KIA ALPG +
Sbjct: 118 VLVGNKTDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKALFKKIAMALPGGNVEA 177
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ST + +DV+ ++ Q+SGC+C
Sbjct: 178 STTANQKIDVSA------PAEEPPQASGCAC 202
>gi|294888433|ref|XP_002772463.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239876689|gb|EER04279.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 152/214 (71%), Gaps = 23/214 (10%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQ 61
P+S+ +K++FLGDQSVGKTSIITRF+Y FD YQATIGIDF++K + L+D R ++LQ
Sbjct: 15 PISS---HKVIFLGDQSVGKTSIITRFLYGAFDTHYQATIGIDFVAKVITLDDGRMIKLQ 71
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD--VIIVL 119
LWDTAGQERFRSLIP+Y+RD++ VVV+D++S++SF + W+D+VR E+G++ V IVL
Sbjct: 72 LWDTAGQERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSWVDQVRDEKGTNGGVEIVL 131
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-------G 172
VGNK D+ + RQVS EE A + EL + + ETSAK+G +I +F +IA ++P G
Sbjct: 132 VGNKADMADLRQVSNEEASALAEELGLKYFETSAKSGIDIDEIFTEIAKSIPEEDPVVGG 191
Query: 173 METLSSTKQEEMVDVNLRSTTGNASQSQSQSSGC 206
T+ T +E+ NA+ ++SQS GC
Sbjct: 192 SNTIKVTSGDEL---------SNAA-AKSQSCGC 215
>gi|71031448|ref|XP_765366.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352322|gb|EAN33083.1| GTP-binding protein rab6, putative [Theileria parva]
Length = 222
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 145/200 (72%), Gaps = 3/200 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+QS GKTSI+TRF+YD + Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 14 RNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQKTMRLQLWDTAGQ 73
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSL+PSYIRDSS A+VVYD+ +R+SF T +WI +++ RG +IV+VGNKTDL++
Sbjct: 74 ERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVVVGNKTDLLD 133
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEEMVDV 187
KR VS EEG++ + E+N F ETSAK G N++ LF +A L ++T+ +++VD+
Sbjct: 134 KRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATEL--LKTIEPEPVSDKLVDI 191
Query: 188 NLRSTTGNASQSQSQSSGCS 207
+L+ + + S S + S S
Sbjct: 192 DLKPSAPSESTSCAGRSAAS 211
>gi|84994386|ref|XP_951915.1| small GTP-binding protein, Rab family [Theileria annulata strain
Ankara]
gi|65302076|emb|CAI74183.1| small GTP-binding protein, Rab family, putative [Theileria
annulata]
Length = 222
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 145/200 (72%), Gaps = 3/200 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+QS GKTSI+TRF+YD + Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 14 RNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQKTMRLQLWDTAGQ 73
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSL+PSYIRDSS A+VVYD+ +R+SF T +WI +++ RG +IV+VGNKTDL++
Sbjct: 74 ERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVVVGNKTDLLD 133
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEEMVDV 187
KR VS EEG++ + E+N F ETSAK G N++ LF +A L ++T+ +++VD+
Sbjct: 134 KRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATEL--LKTIEPEPVSDKLVDI 191
Query: 188 NLRSTTGNASQSQSQSSGCS 207
+L+ + + S S + S S
Sbjct: 192 DLKPSAPSESTSCAGRSAAS 211
>gi|345315420|ref|XP_001505766.2| PREDICTED: ras-related protein Rab-6B-like, partial
[Ornithorhynchus anatinus]
Length = 205
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/123 (79%), Positives = 110/123 (89%)
Query: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR
Sbjct: 1 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 60
Query: 81 DSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAK 140
DS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KR++S++
Sbjct: 61 DSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRKISMKRAGDG 120
Query: 141 SRE 143
R+
Sbjct: 121 DRK 123
>gi|18266415|gb|AAL67567.1|AF461434_1 small GTP binding protein rab6 [Babesia gibsoni]
Length = 227
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 145/210 (69%), Gaps = 12/210 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+QS GKTSI+TRF+YD F Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 20 RIKIVLLGEQSTGKTSIVTRFVYDHFVQQYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFR+L+PSYIRDSS A+VVYD+ +R+SF +W+ +++ RG IIV+VGNKTDL++
Sbjct: 80 ERFRTLMPSYIRDSSAAIVVYDITNRESFERVKEWVKDIKELRGDKAIIVIVGNKTDLLD 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEEMVDV 187
KR+VS +EGE ++ +L +F ETSAK G NI LF +A L ++ L +++VD+
Sbjct: 140 KRKVSYDEGEEEAGKLECLFCETSAKNGDNINDLFNTMATEL--LKNLEPVPVNDKLVDI 197
Query: 188 NLRSTTGNASQSQSQ---------SSGCSC 208
+L+ ++ + + S + C+C
Sbjct: 198 DLKGSSNDTPSNCSDRTKNTYLTVTKACAC 227
>gi|260950339|ref|XP_002619466.1| hypothetical protein CLUG_00625 [Clavispora lusitaniae ATCC 42720]
gi|238847038|gb|EEQ36502.1| hypothetical protein CLUG_00625 [Clavispora lusitaniae ATCC 42720]
Length = 172
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 134/180 (74%), Gaps = 12/180 (6%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVV 88
MYD FD+ Y ATIGIDFLSKTMYLED +TVRLQLWDTAGQERFRSLIPSYIRDS VAV+
Sbjct: 1 MYDTFDDQYAATIGIDFLSKTMYLEDNKTVRLQLWDTAGQERFRSLIPSYIRDSHVAVIC 60
Query: 89 YDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMF 148
YD+ S++SF + +KW+++VR ERG +VI+V+VGNK+DL KRQVS E+ EA + + F
Sbjct: 61 YDITSKKSFDSLAKWVNDVRMERGEEVIVVIVGNKSDLSAKRQVSAEDAEAFCKSVGGKF 120
Query: 149 -IETSAKAGFNIKPLFRKIAAALPGM-ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGC 206
IETS KA N+K LF++IAA LP E+ + +Q E V++++ + +SSGC
Sbjct: 121 VIETSTKANHNVKLLFKRIAACLPEFSESAAEAEQPETVNISIEA---------PESSGC 171
>gi|409045798|gb|EKM55278.1| hypothetical protein PHACADRAFT_184090 [Phanerochaete carnosa
HHB-10118-sp]
Length = 218
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 120/151 (79%), Gaps = 22/151 (14%)
Query: 2 APVSA------LAKYKLVFLGDQSVGKTSIITR--------FMYDKFDNTYQATIGIDFL 47
+PV+A L + K+V LGDQSVGKTS+ITR FMYD FDNTYQATIGIDFL
Sbjct: 5 SPVTADFSSPPLKRSKIVLLGDQSVGKTSLITRRVVSLRLTFMYDTFDNTYQATIGIDFL 64
Query: 48 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVAS--------RQSFLN 99
SK MYLEDRTVRLQLWDTAGQER+RSLIPSYIRD SVA+VV+D+ + RQSFL+
Sbjct: 65 SKAMYLEDRTVRLQLWDTAGQERYRSLIPSYIRDCSVAIVVFDITTFIDIVFVDRQSFLS 124
Query: 100 TSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
TSKWID+VR+ERG+DVI+VLVGNK DL +KR
Sbjct: 125 TSKWIDDVRSERGNDVIVVLVGNKADLSDKR 155
>gi|119191778|ref|XP_001246495.1| hypothetical protein CIMG_00266 [Coccidioides immitis RS]
Length = 143
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/158 (63%), Positives = 126/158 (79%), Gaps = 15/158 (9%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KW+D+VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG+DVIIVLVGNKTDL +KR+V+ +GE ++++ +MFIETSAK G+N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PGM E++DVN+ N +Q S + GC+C
Sbjct: 121 PGM---------EVIDVNI-----NPTQPVS-NEGCAC 143
>gi|156088339|ref|XP_001611576.1| Ras family protein [Babesia bovis]
gi|154798830|gb|EDO08008.1| Ras family protein [Babesia bovis]
Length = 227
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 137/187 (73%), Gaps = 3/187 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+Q+ GKTSI+TRF+YD F Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 20 RIKIVLLGEQNTGKTSIVTRFVYDHFVPAYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFR+L+PSYIRDSS A+VVYD+ S +SF WI +++ RG II++VGNKTDL++
Sbjct: 80 ERFRTLMPSYIRDSSAAIVVYDITSPESFEKVKDWIKDIKELRGDKAIIMIVGNKTDLLD 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEEMVDV 187
KR+VS +EGE ++++L +F ETSAK G NI LF ++ L M+ L +++VD+
Sbjct: 140 KRKVSYDEGEEEAKKLECLFCETSAKNGDNINDLFNTVSTEL--MKNLEPVPVNDKLVDI 197
Query: 188 NLRSTTG 194
+L+S +
Sbjct: 198 DLKSNSA 204
>gi|74834283|emb|CAI44504.1| rab_A74 [Paramecium tetraurelia]
Length = 219
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 127/166 (76%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDTA
Sbjct: 10 MQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A++ YD+ + +SF + KWI++V+ ERG +V+I ++GNKTDL
Sbjct: 70 GQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKTDL 129
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
+RQ+ + EAK++EL F E SAK+ N+ F+K++ L G
Sbjct: 130 ESERQIQFDVAEAKAKELGASFSEVSAKSAHNVAEFFKKLSYDLQG 175
>gi|145540924|ref|XP_001456151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423961|emb|CAK88754.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 127/166 (76%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDTA
Sbjct: 10 MQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A++ YD+ + +SF + KWI++V+ ERG +V+I ++GNKTDL
Sbjct: 70 GQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKTDL 129
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
+RQ+ + EAK++EL F E SAK+ N+ F+K++ L G
Sbjct: 130 ESERQIQFDVAEAKAKELGASFSEVSAKSAHNVAEFFKKLSYDLQG 175
>gi|5020094|gb|AAD38018.1|AF148210_1 GTPase Rab6 [Rattus norvegicus]
Length = 140
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 116/144 (80%), Gaps = 4/144 (2%)
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII+LVGNKT
Sbjct: 1 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 60
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
DL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M
Sbjct: 61 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 120
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ L + GCSC
Sbjct: 121 IDIKLEK----PQEQPVNEGGCSC 140
>gi|74833811|emb|CAI39365.1| rab_A32 [Paramecium tetraurelia]
Length = 215
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 129/167 (77%), Gaps = 1/167 (0%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A AK+K+VF+G+Q+VGKTSII RF+Y++ ++Q TIGIDFLSK + +E++TVRLQLWDT
Sbjct: 10 AFAKFKIVFIGNQAVGKTSIIARFVYEQIPQSHQPTIGIDFLSKCIQVENKTVRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS AV+ YDV++ QSF + W++ VR ERGSDV+ VL+ NK D
Sbjct: 70 AGQERFRSLIPSYIRDSHAAVLCYDVSNAQSFADIKSWLEYVREERGSDVVGVLIANKID 129
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
+E+R V+ +EGE ++E +++ E SAK G N++ F+ +A L G
Sbjct: 130 -IEERVVTTQEGEKLAKEQELLYYEVSAKEGTNVQQTFKNLALKLLG 175
>gi|145477535|ref|XP_001424790.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391856|emb|CAK57392.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 129/167 (77%), Gaps = 1/167 (0%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A AK+K+VF+G+Q+VGKTSII RF+Y++ ++Q TIGIDFLSK + +E++TVRLQLWDT
Sbjct: 10 AFAKFKIVFIGNQAVGKTSIIARFVYEQIPQSHQPTIGIDFLSKCIQVENKTVRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS AV+ YDV++ QSF + W++ VR ERGSDV+ VL+ NK D
Sbjct: 70 AGQERFRSLIPSYIRDSHAAVLCYDVSNAQSFADIKSWLEYVREERGSDVVGVLIANKID 129
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
+E+R V+ +EGE ++E +++ E SAK G N++ F+ +A L G
Sbjct: 130 -IEERVVTTQEGEKLAKEQELLYYEVSAKEGTNVQQTFKNLALKLLG 175
>gi|145549235|ref|XP_001460297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428126|emb|CAK92900.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 126/168 (75%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ KYK+VFLGDQ+VGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWD
Sbjct: 8 GPMQKYKIVFLGDQAVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS A++ +D+ + +SF N +WI++V+ ERG +V+I ++GNK
Sbjct: 68 TAGQERFRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIYILGNKI 127
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
DL +RQ+ ++ E K++EL F E SAK+ N+ F+K++ L G
Sbjct: 128 DLENERQIPTKQAEDKAKELGAQFQEVSAKSAINVAEFFKKLSYDLLG 175
>gi|223941194|dbj|BAH23089.1| small GTP binding protein Rab6 [Babesia bigemina]
Length = 217
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 123/162 (75%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+Q+ GKTSI+TRF+YD F Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 20 RIKIVLLGEQNTGKTSIVTRFVYDHFVPAYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFR+L+PSYIRDSS A+VVYD+ SR+SF WI +++ RG +IVLVGNKTDL++
Sbjct: 80 ERFRTLMPSYIRDSSAAIVVYDITSRESFDKVGDWIKDIKELRGDKAVIVLVGNKTDLLD 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
KR+VS +EGE ++++ +F ETSAK G NI LF IA L
Sbjct: 140 KRKVSYDEGEEQAKKFGCLFCETSAKNGDNINDLFNPIATEL 181
>gi|340501463|gb|EGR28249.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 217
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A+ KYK+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ L+++T+RLQLWDT
Sbjct: 10 AVMKYKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTIQLDNKTLRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF+SLIPSYIRDS+ A++VYDV ++ SF N SKWI+EV+ ERG+D +I ++GNK+D
Sbjct: 70 AGQERFKSLIPSYIRDSNAAIIVYDVTNQSSFNNLSKWIEEVKEERGNDALIFVLGNKSD 129
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
L E + EE ++ N+ + SAK+G NI F+++A AL G + + +
Sbjct: 130 L-EDTKNQQEEFNQSLKQFNLSVQKVSAKSGNNIGNFFKQLAEALSGGQQIDN 181
>gi|145488520|ref|XP_001430264.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833736|emb|CAI39339.1| rab_B32 [Paramecium tetraurelia]
gi|124397360|emb|CAK62866.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 141/208 (67%), Gaps = 6/208 (2%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A AK+K+VF+G+Q+VGKTSII RF+Y++ +Q TIGIDFLSK + ++++TVRLQLWDT
Sbjct: 10 AFAKFKIVFIGNQAVGKTSIIARFVYEQIPEQHQPTIGIDFLSKCIQVDNKTVRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS AV+ YDV++ QSF + W+D VR ERGSDV+ VL+ NK D
Sbjct: 70 AGQERFRSLIPSYIRDSHAAVLCYDVSNAQSFADIKAWLDYVREERGSDVVGVLIANKID 129
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM-----ETLSSTK 180
++ R V+ +EGE ++E ++++ E SAK G N++ F+ +A L G + + +
Sbjct: 130 -IKDRVVTTQEGEKLAQEQDLLYYEVSAKEGTNVQQTFKNLALKLLGPIQDVEQPTTEIE 188
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
Q + N++ + QS C C
Sbjct: 189 QSTNNNNNIQIKPQDKQTPQSDQQKCQC 216
>gi|145537620|ref|XP_001454521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422287|emb|CAK87124.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 127/167 (76%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDT
Sbjct: 9 PMQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS A++ YD+ + +SF + KWI++V+ ERG +V+I ++GNK D
Sbjct: 69 AGQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKID 128
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
L ++R + + GEAK++EL F E SAK+ N+ F+K++ L G
Sbjct: 129 LDQERVIQTDVGEAKAKELGASFSEVSAKSAHNVSEFFKKLSYDLQG 175
>gi|190348918|gb|EDK41472.2| hypothetical protein PGUG_05570 [Meyerozyma guilliermondii ATCC
6260]
Length = 180
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/185 (56%), Positives = 124/185 (67%), Gaps = 14/185 (7%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVV 88
MYD FD+ Y ATIGIDFLSKTMYLED RT+RLQLWDTAGQERFRSLIPSYIRDS VAVV
Sbjct: 1 MYDTFDDQYAATIGIDFLSKTMYLEDNRTIRLQLWDTAGQERFRSLIPSYIRDSHVAVVC 60
Query: 89 YDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMF 148
YD+ +++SF N KWI++VR ERG D IIVLVGNK DL KRQV+ EE E +++ F
Sbjct: 61 YDITNKKSFQNLEKWINDVRLERGDDAIIVLVGNKLDLKNKRQVTAEECEELHKKVGSKF 120
Query: 149 -IETSAKAGFNIKPLFRKIAAALP------GMETLSSTKQEEMVDVNLRSTTGNASQSQS 201
IETS KA N+K LF+KI LP G + E +D+ + +
Sbjct: 121 YIETSTKANHNVKLLFKKIGQCLPDSSDGEGNGDSQNAGNTETIDITVNQN------PEG 174
Query: 202 QSSGC 206
Q SGC
Sbjct: 175 QKSGC 179
>gi|256053248|ref|XP_002570111.1| rab6 [Schistosoma mansoni]
gi|350646524|emb|CCD58834.1| rab6, putative [Schistosoma mansoni]
Length = 196
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P ++ K K VFLG+ GKTSII RFM+D FD Y ATIGIDF+SKT+ ++++RLQL
Sbjct: 7 PEYSIIKSKCVFLGEHGAGKTSIILRFMHDTFDPAYHATIGIDFVSKTLCFNEKSIRLQL 66
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQERF SLIPSYI+DSSVA+VVYDV SR+SF+ KWI E+RTER S +I LVGN
Sbjct: 67 WDTAGQERFSSLIPSYIKDSSVAIVVYDVTSRESFVRADKWISEIRTERPSKTLIFLVGN 126
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL +KR V+ EE K+ + N+ F+ETSAK F I LF ++ + +++++++K+
Sbjct: 127 KVDLEDKRVVTTEEAAKKAEKENLFFVETSAKTDFQINKLFDEVVMEI--VKSINNSKEN 184
Query: 183 EMV 185
E +
Sbjct: 185 ERI 187
>gi|146184753|ref|XP_001030061.2| Ras family protein [Tetrahymena thermophila]
gi|146142676|gb|EAR82398.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777804|dbj|BAJ21298.1| Rab-family small GTPase Rab6D [Tetrahymena thermophila]
Length = 265
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 137/197 (69%), Gaps = 10/197 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+KT++++D+++RL LWDTAGQ
Sbjct: 20 KHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRLSLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSY+RD++ AV+V+DV +++SF N +WI + + RGS+ VLV NK DL
Sbjct: 80 ERFRSLIPSYLRDATCAVIVFDVTNKESFSNVDRWIKDYKDNRGSEAPCVLVANKIDLKL 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL---------PGMETLSST 179
R+V + + E K++E N+ F E SAK G N+ +F+ +A +L P + L++
Sbjct: 140 TREVQLADLEKKAKENNMKFYEISAKTGENVANMFKDMAISLQPVENSILSPNADNLNNQ 199
Query: 180 KQE-EMVDVNLRSTTGN 195
K++ + + N + +TGN
Sbjct: 200 KKDYQFANQNKQPSTGN 216
>gi|340500436|gb|EGR27313.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 201
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+KT++++D+T+RLQLWDTAGQ
Sbjct: 20 KHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTVGVDFLAKTLHVDDKTIRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSY+RD++ AV+V+DV +++SF NT +WI + + RG++ +LV NK D
Sbjct: 80 ERFRSLIPSYLRDATCAVIVFDVTNKESFSNTERWIKDYKDNRGAEAPCILVANKIDQKL 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL-PGMETLSSTKQ 181
+R++S E+GE K++ + + E SAK G N+ +F+ +A L P +S TKQ
Sbjct: 140 QREISQEDGEKKAKSFEMNYYEISAKTGENVVNMFKSMALQLNPSDNIVSPTKQ 193
>gi|74831248|emb|CAI39270.1| rab_B74 [Paramecium tetraurelia]
Length = 219
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 126/164 (76%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDTA
Sbjct: 10 MQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A++ YD+ + +SF + KWI++V+ ERG +V+I ++GNK DL
Sbjct: 70 GQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKIDL 129
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
++R + + GEAK++EL F E SAK+ N+ F+K++ L
Sbjct: 130 DQERVIQTDVGEAKAKELGASFSEVSAKSAHNVSEFFKKLSYDL 173
>gi|340506147|gb|EGR32356.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 248
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 131/176 (74%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+K++ L+D+ +RLQLWDTAGQ
Sbjct: 21 KHKIIFLGDQYVGKTCIIERFMYDVFDEKSHPTVGVDFLAKSIKLDDKNIRLQLWDTAGQ 80
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSY+RD++ A++V+DV +++SF N +W+ + R RG+D VL+GNK D+ +
Sbjct: 81 ERFRSLIPSYLRDATCAIIVFDVTNKESFNNIERWLKDYRDNRGNDASCVLIGNKIDMKQ 140
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEM 184
R++S ++ E K + LN+++ + SAK G N++ +F +A +L +E + K+EE+
Sbjct: 141 IREISQQQAEEKGKMLNMLYFDISAKTGENVQNMFLTMAKSLIPIENNNILKREEI 196
>gi|146413158|ref|XP_001482550.1| hypothetical protein PGUG_05570 [Meyerozyma guilliermondii ATCC
6260]
Length = 180
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 123/185 (66%), Gaps = 14/185 (7%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVV 88
MYD FD+ Y ATIGIDFL KTMYLED RT+RLQLWDTAGQERFRSLIPSYIRDS VAVV
Sbjct: 1 MYDTFDDQYAATIGIDFLLKTMYLEDNRTIRLQLWDTAGQERFRSLIPSYIRDSHVAVVC 60
Query: 89 YDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMF 148
YD+ +++SF N KWI++VR ERG D IIVLVGNK DL KRQV+ EE E +++ F
Sbjct: 61 YDITNKKSFQNLEKWINDVRLERGDDAIIVLVGNKLDLKNKRQVTAEECEELHKKVGSKF 120
Query: 149 -IETSAKAGFNIKPLFRKIAAALP------GMETLSSTKQEEMVDVNLRSTTGNASQSQS 201
IETS KA N+K LF+KI LP G + E +D+ + +
Sbjct: 121 YIETSTKANHNVKLLFKKIGQCLPDSSDGEGNGDSQNAGNTETIDITVNQN------PEG 174
Query: 202 QSSGC 206
Q SGC
Sbjct: 175 QKSGC 179
>gi|29841343|gb|AAP06375.1| similar to NM_130025 putative small GTP-binding protein in
Arabidopsis thaliana [Schistosoma japonicum]
Length = 211
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 126/177 (71%), Gaps = 1/177 (0%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
++ K K VFLGD VGKT II RFMY+ FD Y+ATIGIDF+SKT+ +++VRLQLWDT
Sbjct: 10 SVTKAKCVFLGDYGVGKTCIILRFMYETFDRAYKATIGIDFVSKTLCFNEKSVRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYI+DS VA+VVYDV +R SF+ S WI E+R ER S ++ LVGNK D
Sbjct: 70 AGQERFRSLIPSYIKDSFVAIVVYDVTNRDSFIKASDWIKEIRAERSSKTLVFLVGNKVD 129
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL-PGMETLSSTKQ 181
L ++R VS EE K+ + N+ FIETSAK F I+ LF ++ + M L +Q
Sbjct: 130 LEDERVVSAEEAAEKAEKENLFFIETSAKTDFQIQKLFDEVVKEIVKNMHNLDEQEQ 186
>gi|313234682|emb|CBY10635.1| unnamed protein product [Oikopleura dioica]
Length = 148
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 112/144 (77%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FD YQATIGIDFLSKT+ ++D TVRLQLWDTAGQERFRSLIPSYIRDS+V ++VY
Sbjct: 1 MYDSFDQHYQATIGIDFLSKTLQIDDNTVRLQLWDTAGQERFRSLIPSYIRDSNVGIIVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
+V +SF WI +V+ +RG DVII LVGNKTDL KR+V I E K+ E N+ FI
Sbjct: 61 NVTEEKSFAKIDTWIKDVKDQRGDDVIIFLVGNKTDLEAKRKVDISVAEKKAAEHNIHFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGM 173
ETSAK+G+N+ LF++IA A+ G+
Sbjct: 121 ETSAKSGYNVNALFQRIARAITGL 144
>gi|74831371|emb|CAI39291.1| rab_C69 [Paramecium tetraurelia]
Length = 221
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ KYK+VFLGDQ+VGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWD
Sbjct: 8 GPMQKYKIVFLGDQAVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS A++ +D+ + +SF N +WI++V+ ERG +V+I ++GNK
Sbjct: 68 TAGQERFRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIYILGNKI 127
Query: 125 DLVEKRQVSIEEGEAKSR---ELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
DL +RQ+ ++ E K++ EL F E SAK+ N+ F+K++ L G
Sbjct: 128 DLENERQIPTKQAEDKAKVFSELGAQFQEVSAKSAINVAEFFKKLSYDLLG 178
>gi|117939079|dbj|BAF36693.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 206
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 138/189 (73%), Gaps = 5/189 (2%)
Query: 16 GDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
GDQ VGKTSI++RFM+D ++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+
Sbjct: 1 GDQGVGKTSILSRFMFDSLESNYPPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLL 60
Query: 76 PSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIE 135
P+YIRD + AV+V+DV +R SF + WI++VR +V++++VGNKTDL +KRQVS E
Sbjct: 61 PNYIRDCAAAVIVFDVTNRLSFEHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVSSE 120
Query: 136 EGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGN 195
E + K+ L + E SAKAG+N+K LF+KIA L + +++E+ + N+ + TG
Sbjct: 121 ELQDKANVLCCLSTEASAKAGYNVKNLFKKIALTLL---NVGGSQRED--NSNVLNLTGE 175
Query: 196 ASQSQSQSS 204
A S + +S
Sbjct: 176 AHSSVATAS 184
>gi|117939075|dbj|BAF36691.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 205
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 137/190 (72%), Gaps = 3/190 (1%)
Query: 16 GDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
GDQ VGKTSI++RFM+D F++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+
Sbjct: 1 GDQGVGKTSILSRFMFDSFESNYLPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLL 60
Query: 76 PSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIE 135
P+YIRD + AV+V+DV +R SF + WI++VR +V++++VGNKTDL +KRQV E
Sbjct: 61 PNYIRDCAAAVIVFDVTNRLSFDHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVRTE 120
Query: 136 EGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGN 195
E + K+ L+ + E SAKAG+N+K LF++IA L ++ + EE +V S
Sbjct: 121 ELQEKANLLSCLSTEASAKAGYNVKNLFKRIAVTLL---SVGGSPPEENTNVLNLSGEAY 177
Query: 196 ASQSQSQSSG 205
+S + + +SG
Sbjct: 178 SSATNTAASG 187
>gi|67901230|ref|XP_680871.1| hypothetical protein AN7602.2 [Aspergillus nidulans FGSC A4]
gi|40742992|gb|EAA62182.1| hypothetical protein AN7602.2 [Aspergillus nidulans FGSC A4]
Length = 169
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 15/169 (8%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QS T + + G FL M +RTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSGAHTL------------SLHSQTGARFL---MLYYNRTVRLQLWD 56
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGNKT
Sbjct: 57 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 116
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA ALP +
Sbjct: 117 DLSDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPDL 165
>gi|344249535|gb|EGW05639.1| Ras-related protein Rab-6B [Cricetulus griseus]
Length = 140
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 113/129 (87%), Gaps = 2/129 (1%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF TSKWID+VRTE
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RGSDVII+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K + ++A +L
Sbjct: 61 RGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQVRTQLAMSL 120
Query: 171 --PGMETLS 177
G+E L+
Sbjct: 121 SCSGLEALT 129
>gi|117939077|dbj|BAF36692.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 205
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 122/155 (78%)
Query: 16 GDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
GDQ VGKTSI++RFM+D F++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+
Sbjct: 1 GDQGVGKTSILSRFMFDSFESNYLPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLL 60
Query: 76 PSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIE 135
P+YIRD + AV+V+DV +R S+ + WI++VR +V++++VGNKTDL +KRQV+ E
Sbjct: 61 PNYIRDCAAAVIVFDVTNRLSYEHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVTSE 120
Query: 136 EGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
E + K+ L + E SAKAG+N+K +F+KIA L
Sbjct: 121 ELQEKANALCCLSTEASAKAGYNVKNVFKKIAVTL 155
>gi|385305861|gb|EIF49808.1| gtp-binding protein ryh1 [Dekkera bruxellensis AWRI1499]
Length = 139
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/138 (68%), Positives = 115/138 (83%), Gaps = 2/138 (1%)
Query: 7 LAKYKL-VFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
L KYK+ V LGDQ VGKTS+ITRFMYD FD+ Y ATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 2 LTKYKISVSLGDQGVGKTSLITRFMYDTFDSHYAATIGIDFLSKTMYLDDKTIRLQLWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS+VA+VVYD+ +R S + KW+D +R ERG DV+I+LVGNK+D
Sbjct: 62 AGQERFRSLIPSYIRDSNVAIVVYDITNRDSXNDVQKWLDYIREERGKDVLIILVGNKSD 121
Query: 126 LVEKRQVSIEEGEAKSRE 143
L +K V+ +E E S++
Sbjct: 122 LKDK-VVTSDEAEELSKK 138
>gi|74834309|emb|CAI44512.1| rab_C15 [Paramecium tetraurelia]
Length = 217
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Query: 4 VSALAKYKLVFLGDQSVGKT--SIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
V+ L+KYKL +G ++ R M +K + T+GIDF+SKT+Y EDRT+RLQ
Sbjct: 9 VAPLSKYKLWERHPLQIGLCLIHLMGRIMQEKVKLQNKPTVGIDFISKTLYYEDRTIRLQ 68
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDS+VAVV YDV + SF + ++WI +VR ERG+DVII +V
Sbjct: 69 LWDTAGQERFRSLIPSYIRDSAVAVVCYDVEVKTSFASITRWISDVRLERGNDVIIFIVA 128
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
NK D V+ R +S EEG ++E + FIE SAK G N++ LF++IAA LPG ET
Sbjct: 129 NKID-VDNRVISTEEGANLAKECDAHFIEVSAKTGNNVELLFKQIAATLPGTET 181
>gi|449691705|ref|XP_002170841.2| PREDICTED: ras-related protein Rab-6A-like [Hydra magnipapillata]
Length = 175
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 125/179 (69%), Gaps = 4/179 (2%)
Query: 30 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 89
MYD FD+TYQATIGIDFLSKT+ + ++ + LQ+WDTAG ERFRSLIP+YIRD S AV VY
Sbjct: 1 MYDSFDSTYQATIGIDFLSKTLVVGEKKIHLQIWDTAGTERFRSLIPNYIRDLSAAVAVY 60
Query: 90 DVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFI 149
D+ S SF + ID+VR ER SDV+IVL GNKTDL EKR+VS+E+G +++EL V F+
Sbjct: 61 DITSVSSFDQVERSIDDVRKER-SDVVIVLCGNKTDLTEKRRVSMEQGARRAKELGVTFM 119
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
E SAK G N+K LF IA+AL S++K+E+ +N+ + SS C C
Sbjct: 120 EASAKTGHNVKKLFLHIASALVNE---SNSKKEKSKPINIIVSPHTEKYIDPDSSYCGC 175
>gi|324514427|gb|ADY45866.1| GTP-binding protein ryh1 [Ascaris suum]
Length = 226
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 119/164 (72%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGK+SIIT+F+ ++ Y ATIGIDF SK + +E +TVRLQ+WDTA
Sbjct: 34 LTKYKIVFLGEQGVGKSSIITKFLRNEVAEDYIATIGIDFFSKNIVVEGKTVRLQIWDTA 93
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSY+RDS VAV+VYDV+S SF T +W + V +R D+ I+LVGNK+DL
Sbjct: 94 GQERFRSLIPSYLRDSDVAVIVYDVSSPTSFAKTRQWFNYVNRQRAGDIAIILVGNKSDL 153
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
+KR++S E GE + N ++ SA G NI+ LF IA L
Sbjct: 154 TDKRKISYESGERIAAAWNCRHMDVSALTGRNIQELFVFIAGTL 197
>gi|340503282|gb|EGR29885.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 213
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 125/184 (67%), Gaps = 9/184 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K++FLGDQ VGKT II RFMYD FD TIG+DFL+KT+ ++++++RLQLWDTAGQ
Sbjct: 21 KHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTIGVDFLAKTITIDEKSIRLQLWDTAGQ 80
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIPSY+RD++ AV+V+D+ + SF N KWI + + RG D +LV NK D+
Sbjct: 81 ERFRSLIPSYLRDATCAVIVFDITQKTSFDNLDKWIQDYKDNRGIDAPFILVANKLDMKL 140
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL---------PGMETLSST 179
R+V+ +E E K++ + V + E SAK G N+ +F+ +A +L PG ++
Sbjct: 141 SREVTQQEAEQKAQSIRVNYYEISAKTGENVLNMFKSMATSLQPIEQSILNPGQSNENNK 200
Query: 180 KQEE 183
Q+E
Sbjct: 201 NQDE 204
>gi|340501363|gb|EGR28156.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 127/186 (68%), Gaps = 21/186 (11%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYK+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ LE++T+RLQLWDTA
Sbjct: 10 VVKYKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTISLENKTLRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDV--------------------ASRQSFLNTSKWIDE 106
GQERF+SLIPSYIRDS+ A++VY+V + SF N SKWI+E
Sbjct: 70 GQERFKSLIPSYIRDSNAAIIVYEVIRVFIYYFYYFQLFFYLKKQKDQSSFNNLSKWIEE 129
Query: 107 VRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
V+ ERG+D +I ++GNK+DL E R+VS E ++ + E SAK+G NI F+++
Sbjct: 130 VKEERGNDALIFVLGNKSDL-EDRKVSTTEATQVLKQFGLNVQEVSAKSGQNIGTFFKQL 188
Query: 167 AAALPG 172
+ AL G
Sbjct: 189 SYALSG 194
>gi|183231256|ref|XP_655064.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802558|gb|EAL49676.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 196
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 135/205 (65%), Gaps = 9/205 (4%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F+ Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMNGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AV+VYD+ RQSF + KWI++VR++ ++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL R+V+ +E AK + M ETSAK NI LF I L TL +E
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLS---TLEPPVEEH 176
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+ V+L S +++++S+G C
Sbjct: 177 IETVSLGS-----KKAENESNGGCC 196
>gi|183232546|ref|XP_655103.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801978|gb|EAL49717.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709304|gb|EMD48591.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 135/205 (65%), Gaps = 9/205 (4%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F+ Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AV+VYD+ RQSF + KWI++VR++ ++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL R+V+ +E AK + M ETSAK NI LF I L TL +E
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLS---TLEPPVEEH 176
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
+ V+L S +++++S+G C
Sbjct: 177 IETVSLGS-----KKAENESNGGCC 196
>gi|117939023|dbj|BAF36665.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 179
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 118/150 (78%)
Query: 21 GKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTSI++RFM+D F++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+P+YIR
Sbjct: 1 GKTSILSRFMFDSFESNYLPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLLPNYIR 60
Query: 81 DSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAK 140
D + AV+V+DV +R SF + WI++VR +V++++VGNKTDL +KRQV EE + K
Sbjct: 61 DCAAAVIVFDVTNRLSFDHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVRTEELQEK 120
Query: 141 SRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
+ L+ + E SAKAG+N+K +F++IA L
Sbjct: 121 ANLLSCLSTEASAKAGYNVKNIFKRIAVTL 150
>gi|357463331|ref|XP_003601947.1| Ras-related protein RABH1B [Medicago truncatula]
gi|355490995|gb|AES72198.1| Ras-related protein RABH1B [Medicago truncatula]
Length = 119
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/116 (78%), Positives = 106/116 (91%), Gaps = 2/116 (1%)
Query: 93 SRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETS 152
+RQSFLNT+KW++EVR ERGSDVIIVLVGNKTDLVEKRQVSIEEG+AKSRE +MFIETS
Sbjct: 6 NRQSFLNTNKWVEEVRAERGSDVIIVLVGNKTDLVEKRQVSIEEGDAKSRESGIMFIETS 65
Query: 153 AKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
AKAGFNIKPLFRKIA+ALPGME+L STKQ++MVDVNL+ST +S+++ Q GCSC
Sbjct: 66 AKAGFNIKPLFRKIASALPGMESL-STKQDDMVDVNLKSTA-YSSRTEQQGGGCSC 119
>gi|167389639|ref|XP_001739030.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897453|gb|EDR24605.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 8/203 (3%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AV+VYD+ RQSF N KWI++VR++ ++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL R+V+ +E AK + ETSAK NI LF I L TL +E
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKLS---TLEPPVEEH 176
Query: 184 MVDVNLRSTTGNASQSQSQSSGC 206
+ V++ GN + GC
Sbjct: 177 IETVSI----GNKKAENESNGGC 195
>gi|388500442|gb|AFK38287.1| unknown [Lotus japonicus]
Length = 106
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/94 (94%), Positives = 91/94 (96%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASR 94
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVAS+
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASK 94
>gi|56790148|dbj|BAD82870.1| small GTPase EhRabX22 [Entamoeba histolytica]
Length = 192
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 132/200 (66%), Gaps = 9/200 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K K+VFLGD SVGKT II RFM F+ Y+ATIG DF +KTM ++++++LQ+WDTAGQ
Sbjct: 2 KQKIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQ 61
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+RSLIPSYIRDSS AV+VYD+ RQSF + KWI++VR++ ++ + LVGNK DL
Sbjct: 62 ERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNKLDL-G 120
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
R+V+ +E AK + M ETSAK NI LF I L TL +E + V+
Sbjct: 121 HREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLS---TLEPPVEEHIETVS 177
Query: 189 LRSTTGNASQSQSQSSGCSC 208
L S +++++S+G C
Sbjct: 178 LGS-----KKAENESNGGCC 192
>gi|440295244|gb|ELP88157.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 197
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 133/207 (64%), Gaps = 12/207 (5%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE--DRTVRLQ 61
+S L K+K+VFLGD SVGKT II RFM F Y+ATIG DF SKT+ E +TV+LQ
Sbjct: 1 MSGLKKHKIVFLGDSSVGKTCIIGRFMTSSFCTNYEATIGTDFSSKTLTDEATQQTVQLQ 60
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SLIPSYIRDSSVAV+VYD+ RQ+F N W+++V ++ DVI+ +VG
Sbjct: 61 IWDTAGQERYHSLIPSYIRDSSVAVIVYDINDRQTFDNIDNWVEDVHSKEKGDVILFIVG 120
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR+V+ +E AK+ + ETSAK N+ LF+ I L L TK
Sbjct: 121 NKLDL-GKREVTQKEAIAKADYHHCQCFETSAKENCNVTELFKAITERLCA---LQPTKD 176
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
E + VNL+ +Q +++G C
Sbjct: 177 ETVETVNLK------TQPTEKTNGGCC 197
>gi|11558651|emb|CAC17834.1| secretion related GTPase (SrgC) [Aspergillus niger]
Length = 138
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 113/146 (77%), Gaps = 8/146 (5%)
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAVVVYD+++ +SF NT KWID+VR ERG+DVIIVLVGN
Sbjct: 1 WDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGN 60
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL +KR+V+ +GE ++++ +MFIETSAK G N+K LFR+IA A PGME S ++
Sbjct: 61 KTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAXAXPGMEV--SHRRH 118
Query: 183 EMVDVNLRSTTGNASQSQSQSSGCSC 208
+M+DVN+ + + GC+C
Sbjct: 119 QMIDVNI------TRKETXTNDGCAC 138
>gi|340507324|gb|EGR33304.1| ras small monomeric gtpase, putative [Ichthyophthirius multifiliis]
Length = 189
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 104/125 (83%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYKLVF+GDQSVGKTSII RF+YD F T Q T+GIDF++KT++L+++T+RLQLWDTA
Sbjct: 10 VKKYKLVFIGDQSVGKTSIINRFIYDNFVGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A++ YDV QSF N SKWI+ V+ ERG++V+ +L+GNK DL
Sbjct: 70 GQERFRSLIPSYIRDSDAAILTYDVTKAQSFQNLSKWIEYVKEERGNEVLTILLGNKIDL 129
Query: 127 VEKRQ 131
E RQ
Sbjct: 130 QENRQ 134
>gi|340501713|gb|EGR28462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 585
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 119/163 (73%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
K+K++FLGDQ VGK+ II RFMYD FD +T+G+DFL+KT++ D++VRLQLWDTAG
Sbjct: 368 VKHKIIFLGDQQVGKSCIIERFMYDVFDEKSHSTVGVDFLAKTLHTGDKSVRLQLWDTAG 427
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QERFRSLIPSY+RD++ A++V+DV +++S N KWI + + RG++ VLV NK DL
Sbjct: 428 QERFRSLIPSYLRDANCAIIVFDVTTKESLDNIDKWIKDYKDNRGTEAYCVLVANKIDLK 487
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
R ++ E + K++ LN+ + E SAK+G NI F++++ L
Sbjct: 488 LSRVITTETAQQKAQSLNMPYYEVSAKSGENILETFKQVSTYL 530
>gi|167389097|ref|XP_001738817.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897808|gb|EDR24880.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 128/203 (63%), Gaps = 8/203 (3%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AV+VYD+ RQSF N KWI++VR++ ++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
DL R+V+ +E AK + ETSAK NI LF I L TL ++
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKLS---TLEPPVEDH 176
Query: 184 MVDVNLRSTTGNASQSQSQSSGC 206
+ V++ GN + GC
Sbjct: 177 IETVSI----GNKKAENESNGGC 195
>gi|224086807|ref|XP_002335184.1| predicted protein [Populus trichocarpa]
gi|222833035|gb|EEE71512.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/96 (92%), Positives = 91/96 (94%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQS 96
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVAS S
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASELS 96
>gi|2865392|gb|AAC32735.1| GTP binding protein [Plasmodium falciparum]
Length = 116
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/110 (76%), Positives = 97/110 (88%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FDN YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD 114
TAGQERFRSLIPSYIRDS+ A+VVYD+ +RQSF NT+KWI ++ ERG D
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKD 116
>gi|384499370|gb|EIE89861.1| hypothetical protein RO3G_14572 [Rhizopus delemar RA 99-880]
Length = 142
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 114/162 (70%), Gaps = 24/162 (14%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYD+ +VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITK------------DVRAE 48
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG +VIIVLVGNKTDL +KR+V++EEGE K+ + V+FIETSAKAG N+K LF++IA AL
Sbjct: 49 RGLEVIIVLVGNKTDLSDKREVTLEEGEKKASDTGVLFIETSAKAGHNVKSLFKRIALAL 108
Query: 171 PGMET----LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PGM + Q + VD+N + Q+ SS C+C
Sbjct: 109 PGMNNDANGIEEKDQLQKVDLN--------TSEQTNSSSCAC 142
>gi|357463333|ref|XP_003601948.1| Ras-related protein Rab-6A [Medicago truncatula]
gi|355490996|gb|AES72199.1| Ras-related protein Rab-6A [Medicago truncatula]
Length = 101
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/93 (93%), Positives = 89/93 (95%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MVTVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVAS 93
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVAT 93
>gi|281353162|gb|EFB28746.1| hypothetical protein PANDA_003355 [Ailuropoda melanoleuca]
Length = 105
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 97/105 (92%)
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
VRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII
Sbjct: 1 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 60
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPL 162
+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K +
Sbjct: 61 MLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQV 105
>gi|344252929|gb|EGW09033.1| Ras-related protein Rab-6A [Cricetulus griseus]
Length = 108
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/105 (80%), Positives = 97/105 (92%)
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVII 117
VRLQLWDTAGQERFRSLIPSYIRDS+VAVVVYD+ + SF T+KWID+VRTERGSDVII
Sbjct: 1 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 60
Query: 118 VLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPL 162
+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K +
Sbjct: 61 MLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQV 105
>gi|55733645|emb|CAH93499.1| hypothetical protein [Pongo abelii]
Length = 129
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 104/133 (78%), Gaps = 4/133 (3%)
Query: 76 PSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIE 135
PSYIRDS+VAVVVYD+ + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IE
Sbjct: 1 PSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIE 60
Query: 136 EGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGN 195
EGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L
Sbjct: 61 EGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL----DK 116
Query: 196 ASQSQSQSSGCSC 208
+ + GCSC
Sbjct: 117 PQEPPASEGGCSC 129
>gi|429858023|gb|ELA32859.1| ras small monomeric GTPase [Colletotrichum gloeosporioides Nara
gc5]
Length = 151
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 121/171 (70%), Gaps = 21/171 (12%)
Query: 38 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSF 97
YQATIGIDFLSK + T+G LIPSYIRDSSVAV+VYD+++ +SF
Sbjct: 2 YQATIGIDFLSKARFPT----------TSG------LIPSYIRDSSVAVLVYDISNAKSF 45
Query: 98 LNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGF 157
NT KWID+VR ERG+DVIIVLVGNKTDL +KR+V+ ++GE ++++ N+MF+ETSAK G
Sbjct: 46 QNTKKWIDDVRAERGNDVIIVLVGNKTDLNDKREVTTQQGEEEAKKNNLMFVETSAKLGH 105
Query: 158 NIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
N+K LF++IA ALPGME + +Q +++++T +SQ GC+C
Sbjct: 106 NVKTLFKRIAQALPGMEGTDAAQQASSQMIDVKTTPAASSQ-----EGCAC 151
>gi|384487952|gb|EIE80132.1| GTP-binding protein RAB6 [Rhizopus delemar RA 99-880]
Length = 124
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 109/160 (68%), Gaps = 38/160 (23%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTE 110
MYLED+TVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD+++RQSF+NTSKWID+VR E
Sbjct: 1 MYLEDKTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDISNRQSFINTSKWIDDVRAE 60
Query: 111 RGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLV ETSAKAG N+K LF+KIA +L
Sbjct: 61 RGEDVIIVLV-----------------------------ETSAKAGHNVKTLFKKIAQSL 91
Query: 171 PGME--TLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
PG++ T+ S ++ M VNL +T +S +SGC+C
Sbjct: 92 PGVDGSTIQSDSKDSMQKVNLNNT-------ESNTSGCAC 124
>gi|254566325|ref|XP_002490273.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|238030069|emb|CAY67992.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|328350666|emb|CCA37066.1| Ras-related protein ORAB-1 [Komagataella pastoris CBS 7435]
Length = 206
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 132/204 (64%), Gaps = 10/204 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D FD+ ++TIG FL++T+ L++RT ++ ++WDT
Sbjct: 11 FAQFKLVLLGESAVGKSSIVHRFVTDSFDDLRESTIGAAFLTQTIQLDERTTIKFEIWDT 70
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ A+V YD+ S WI E++ + +D+++ LVGNK D
Sbjct: 71 AGQERYKSLAPMYYRNANCALVAYDITQESSLDRAKSWIQELQKQASADIVVALVGNKLD 130
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQEEM 184
L +R+VS +E + + EL ++F E SAK G IK +F IA+ LP E L S+TK+
Sbjct: 131 LEAERKVSTKEAKEYADELGLIFKEISAKTGEGIKDVFHSIASKLPVEEKLNSATKRRRN 190
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+N ST S CSC
Sbjct: 191 IDLNRPSTNNQES--------CSC 206
>gi|440299778|gb|ELP92315.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 184
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 122/194 (62%), Gaps = 13/194 (6%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++A+ K+K+VFLGD SVGKT II RFM F+N Y++ + + +T++LQ+W
Sbjct: 1 MAAMMKHKIVFLGDSSVGKTCIIGRFMTGDFNNGYESLVCKN---------GKTIQLQIW 51
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDS+ AVVVYDV RQ+F N S+W+ +++ ++ + LVGNK
Sbjct: 52 DTAGQERYRSLIPSYIRDSAAAVVVYDVNDRQTFENVSRWVKDLKELEKGNIFVYLVGNK 111
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
D+ E R+V +E AK EL+ ETSAK NI LF IA L TL E
Sbjct: 112 IDM-ETREVQQKEALAKGEELHCNCFETSAKTNINISELFASIAENLC---TLPIPADEH 167
Query: 184 MVDVNLRSTTGNAS 197
+ VN+ +GN S
Sbjct: 168 VEVVNVNKNSGNTS 181
>gi|312072937|ref|XP_003139294.1| Rab6A [Loa loa]
Length = 123
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 86/90 (95%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASR 94
TAGQERFRSLIPSYIRDS+VAVVVYD+ S+
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITSQ 96
>gi|145535658|ref|XP_001453562.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834359|emb|CAI44524.1| rab_B51 [Paramecium tetraurelia]
gi|124421284|emb|CAK86165.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 118/177 (66%), Gaps = 2/177 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A K KLVFLG+ VGKTSII RF+ + FD Q T+GIDF+SK M ++ +T+RL LWDT
Sbjct: 5 ARQKQKLVFLGNSFVGKTSIIERFVQNTFDPKSQPTVGIDFISKNMTIDGKTMRLLLWDT 64
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SLIP Y+RD+ AV+V+DV SR SF + +W EV+ RG++ +IV++GNK D
Sbjct: 65 AGQERFHSLIPGYVRDAQCAVIVFDVTSRHSFESLDRWFKEVKQTRGNEALIVILGNKID 124
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
+R VS +E + + ++++ E SAK G I+ +I ALP +L T+ +
Sbjct: 125 A--ERVVSADEAREYAIKKDILYYEVSAKTGKGIEEAMEQICLALPTEHSLLITQSQ 179
>gi|170586196|ref|XP_001897865.1| Ras-related protein Rab-6B [Brugia malayi]
gi|158594260|gb|EDP32844.1| Ras-related protein Rab-6B, putative [Brugia malayi]
Length = 160
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 67 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 126
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVAS 93
TAGQERFRSLIPSYIRDS+VAVVVYD+ S
Sbjct: 127 TAGQERFRSLIPSYIRDSTVAVVVYDITS 155
>gi|406604009|emb|CCH44471.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 208
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 126/202 (62%), Gaps = 7/202 (3%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + D+T++ ++WDTAGQER
Sbjct: 10 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCIIGDKTIKFEIWDTAGQER 69
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK- 129
F SL P Y R++ A+VVYD+ SF+ WI E+ + D+II LVGNK D+VE+
Sbjct: 70 FASLAPMYYRNAQAALVVYDITKPASFIKARHWIKELHEQASKDIIIALVGNKLDVVEED 129
Query: 130 ---RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
R+V+ EEGE + E ++F+ETSAK FN+K +F I +P E ++++ ++ D
Sbjct: 130 ESNRKVAYEEGETLANEEGLIFLETSAKTSFNVKEVFMNIGQKIPNPENVTASGEQGRND 189
Query: 187 VNLRSTTGNASQSQSQSSGCSC 208
+ N S +++GC+C
Sbjct: 190 ARVDLNVNNDS---VENNGCNC 208
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 133/215 (61%), Gaps = 17/215 (7%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQ 61
P + A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ +
Sbjct: 11 PGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFE 70
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L G
Sbjct: 71 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAG 130
Query: 122 NKTDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV +KR V + EA +RE ++F ETSAK N++ LF IA LP G
Sbjct: 131 NKLDLVTDSPDKRAVQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGP 190
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L S + V+LR + N +Q+ GC+C
Sbjct: 191 RNLRSNPRP---GVDLRPESAN-----TQAGGCNC 217
>gi|402594689|gb|EJW88615.1| GTP-binding protein ryh1 [Wuchereria bancrofti]
Length = 100
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVAS 93
TAGQERFRSLIPSYIRDS+VAVVVYD+ S
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITS 95
>gi|350534828|ref|NP_001232399.1| putative RAB6A member RAS oncogene family variant 4 [Taeniopygia
guttata]
gi|197129907|gb|ACH46405.1| putative RAB6A member RAS oncogene family variant 4 [Taeniopygia
guttata]
Length = 135
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 84/88 (95%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTA
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASR 94
GQERFRSLIPSYIRDS+ AVVVYD+ SR
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITSR 98
>gi|123389208|ref|XP_001299687.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|72536122|gb|AAZ73169.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121880590|gb|EAX86757.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 129/200 (64%), Gaps = 11/200 (5%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K+V +GD SVGKTSII +F+Y+ + +QAT+GIDF SK + ++ + V++Q+WDTAGQE
Sbjct: 6 HKVVLVGDSSVGKTSIINQFIYESISDEHQATVGIDFFSKQIEVDGKVVKMQIWDTAGQE 65
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVI---IVLVGNKTDL 126
+F SLIPSYIRDS+VAV VYD+ S +SF + +W T+ SD+ +V VGNKTDL
Sbjct: 66 KFSSLIPSYIRDSTVAVFVYDITSEESFDHLERW-----TKLVSDIANPSLVFVGNKTDL 120
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
+ RQV IE + S E FIE SAKA NIK LF+ I A +P ++ K E +
Sbjct: 121 SDARQVPIERLQNYSEEKKGKFIEVSAKAPTNIKELFQMI-AEIPPVDLPEPAK--ETTN 177
Query: 187 VNLRSTTGNASQSQSQSSGC 206
V + S + ++S GC
Sbjct: 178 VKAPANLNANSNNNAKSGGC 197
>gi|313213264|emb|CBY37104.1| unnamed protein product [Oikopleura dioica]
gi|313226486|emb|CBY21631.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 113/169 (66%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F + ++TIG FL++T+ L+D TV+ ++WDTAGQ
Sbjct: 13 QFKLVLLGEAAVGKSSLVLRFVKGEFKDHQESTIGAAFLTQTVCLDDVTVKFEIWDTAGQ 72
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R + AVVVYD+ +F W+ E+R + D++I L GNK DL
Sbjct: 73 ERYHSLAPMYYRGAQAAVVVYDIQCPDTFSRAQAWVKELRQQANQDIVIALAGNKADLAA 132
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
KR++ EE E ++E N++F+ETSAK N+ LF +IA LP ++ S
Sbjct: 133 KREIETEEAEVYAKENNLLFMETSAKTALNVNDLFLQIAKKLPKKDSQS 181
>gi|226372644|gb|ACO51947.1| Ras-related protein Rab-5B [Rana catesbeiana]
Length = 213
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GNK+DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
EKR V EE +A + + +++F+ETSAK N+ LF IA +P + + T
Sbjct: 137 AEKRMVEFEEAQAYAEDTSLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAARNRG 196
Query: 187 VNLRSTTGNASQSQSQSSGCS 207
VNL+ S Q +S CS
Sbjct: 197 VNLQ-----GSDQQPRSGCCS 212
>gi|385302406|gb|EIF46539.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 208
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 132/205 (64%), Gaps = 11/205 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE-DRTVRLQLWDT 65
++KLV LG+ +VGK+SI+ RF+ D F++ ++TIG FL++T+ L+ D TV+ ++WDT
Sbjct: 12 FVQFKLVLLGESAVGKSSIVQRFVKDSFNDFKESTIGAAFLTQTIDLDSDTTVKFEIWDT 71
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER+RSL Y R++ A+VVYD+ + S WI E++ + ++++I LVGNKTD
Sbjct: 72 AGQERYRSLASIYYRNAQSALVVYDITQKASLDKAKYWIKELQKQASNNIVIALVGNKTD 131
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE-- 183
L E+RQ+ EE +A + E ++F E SAK+G IK FR+IA +P ETL + +
Sbjct: 132 LEEERQIPTEEAQAFANEAGLLFFEVSAKSGKGIKDCFREIALKMPIEETLKRRRDRKRG 191
Query: 184 MVDVNLRSTTGNASQSQSQSSGCSC 208
VD+N R +T N Q C+C
Sbjct: 192 TVDLNKRPST-NEQQ-------CAC 208
>gi|427786891|gb|JAA58897.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 218
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 APQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAG 133
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR V +EE +A S E ++F+ETSAK N+ +F IA LP E +S
Sbjct: 134 NKADLASKRAVELEEAQAYSEENGLLFMETSAKTAMNVNDIFLAIAKKLPKTEQGTSAVG 193
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGC 206
R + S+ QS GC
Sbjct: 194 GGASGQGRRGV--DLSEHPQQSGGC 216
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 15/213 (7%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++W
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIW 73
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNK 133
Query: 124 TDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMET 175
DLV +KR +S + E +RE ++F ETSAK N+K LF IA LP G
Sbjct: 134 LDLVTESPDKRAISTADAEQYAREAGLLFFETSAKTCENVKELFTAIAKKLPIDQAGPRN 193
Query: 176 LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L +Q + VNLR A+Q+Q +GC+C
Sbjct: 194 LRPGQQRQ--GVNLRP---EANQTQG-PAGCNC 220
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 133/213 (62%), Gaps = 15/213 (7%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++W
Sbjct: 15 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK
Sbjct: 75 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNK 134
Query: 124 TDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMET 175
DLV +KR +S + E +RE ++F ETSAK N+K LF IA LP G
Sbjct: 135 LDLVTESPDKRAISTADAEQYAREAGLLFFETSAKTSENVKELFTAIAKKLPIDQAGPRN 194
Query: 176 LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L +Q VNLR A+Q+Q +GC+C
Sbjct: 195 LRPGQQRP--GVNLRP---EANQTQG-PAGCNC 221
>gi|401400583|ref|XP_003880812.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
gi|325115224|emb|CBZ50779.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 241
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 14/204 (6%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 43 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGSCIVKFEIWDTAGQ 102
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRT--ERGSDVIIVLVGNKTDL 126
ER+RSL P Y R ++ AVVVYD+++R SF W+ E++T +R S+V+I L GNK DL
Sbjct: 103 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQTVNDR-SNVVIALAGNKEDL 161
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
+RQV +E + + E ++FIETSAK G N+ LF +IAAALP S + +
Sbjct: 162 GAERQVPKQEAQQYADEHGILFIETSAKTGHNVNELFYEIAAALP----KSRKEHDPHAG 217
Query: 187 VNLRSTTGNASQSQSQSSG--CSC 208
L N +Q Q SSG C+C
Sbjct: 218 FQL-----NKTQEQKSSSGSWCAC 236
>gi|47086269|ref|NP_998050.1| ras-related protein Rab-5B [Danio rerio]
gi|42744592|gb|AAH66634.1| RAB5B, member RAS oncogene family [Danio rerio]
Length = 214
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 122/197 (61%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++
Sbjct: 14 PQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEI 73
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGN 133
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL +KR V EE + + + ++F+ETSAK N+ LF IA +P +T + T
Sbjct: 134 KADLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTDTQNPTHAA 193
Query: 183 EMVDVNLRSTTGNASQS 199
VNL+ +++S
Sbjct: 194 RHRGVNLQDPDAQSTRS 210
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 132/215 (61%), Gaps = 17/215 (7%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQ 61
P + A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ +
Sbjct: 11 PGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFE 70
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L G
Sbjct: 71 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAG 130
Query: 122 NKTDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV +KR + + EA +RE ++F ETSAK+ N++ LF IA LP G
Sbjct: 131 NKLDLVTDSPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKLPLDQAGP 190
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L S + V+LR Q++GCSC
Sbjct: 191 RNLRSNPRP---GVDLRPEAAG-----PQANGCSC 217
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++K+V LGD SVGK+SI+ R D++ + TIG FL+KT+ ++ T++ ++WDTAGQ
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R S+ A+VVYD+ S SF+ KWIDE+R G++ +I LVGNK DL +
Sbjct: 68 ERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGS-GNEAVIFLVGNKCDLAD 126
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
R ++ EE E +R L++ +IETSAKA N+ LF +IA LP E
Sbjct: 127 SRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE 172
>gi|443707017|gb|ELU02811.1| hypothetical protein CAPTEDRAFT_227582 [Capitella teleta]
Length = 210
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 8/205 (3%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
P S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 12 GPQSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 71
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L G
Sbjct: 72 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVRELQRQASPNIVIALAG 131
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR V EE +A + E +++F+ETSAK N+ +F IA LP E + +Q
Sbjct: 132 NKADLANKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEQ-AGQQQ 190
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGC 206
V+L SQ S GC
Sbjct: 191 SRQRGVDL-------SQENQPSGGC 208
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 132/211 (62%), Gaps = 17/211 (8%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV +KR V + EA +RE ++F ETSAK N++ LF IA LP G L
Sbjct: 135 LVTDSPDKRAVQAADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
S+ + V+LR + N +Q+ GC+C
Sbjct: 195 SSARP---GVDLRPESTN-----TQAGGCNC 217
>gi|9988838|gb|AAG10794.1|AF296447_1 Rab5 [Toxoplasma gondii]
Length = 240
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 9/201 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 44 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQ 103
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRT-ERGSDVIIVLVGNKTDLV 127
ER+RSL P Y R ++ AVVVYD+++R SF W+ E+++ S+V+I L GNK DL
Sbjct: 104 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLA 163
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+RQV +E + + E ++F+ETSAK G N+ LF +IAAALP + K+ +
Sbjct: 164 AERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALP-----KTRKEHDPPGF 218
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
L T Q S SS C+C
Sbjct: 219 QLNKTQ---EQKSSSSSWCAC 236
>gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3]
Length = 202
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M +++ +K++F+GD SVGKTSII +++Y+ Y +TIGID+LSK + D+ ++L
Sbjct: 1 MKNITSTPFHKIIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYLSKIVNEADKPIQL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Q+WDTAGQE+F SLIP+YIR S++AV+VYD+ +QSF N W V ++ ++V
Sbjct: 61 QIWDTAGQEKFHSLIPAYIRSSTIAVLVYDITCKQSFDNIQTWYQMVI--NNAEPAFIIV 118
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNK+DL +R SIEEG+ + ++N FIETSA NI LF I +E ++ +
Sbjct: 119 GNKSDLDSERANSIEEGKKFANQINAKFIETSAITSENISQLFDIIIQIPIPVEEVAQEE 178
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
++ M+ + + Q++GC C
Sbjct: 179 KQVMITI----PSDKMDTKAPQNNGCGC 202
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++K+V LGD SVGK+SI+ R D++ + TIG FL+KT+ ++ T++ ++WDTAGQ
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R S+ A+VVYD+ S SF KWIDE+R G++ II LVGNK DL +
Sbjct: 68 ERYHSLTPMYYRGSNAALVVYDITSDSSFTQAKKWIDELRGS-GNEAIIFLVGNKCDLAD 126
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
R ++ EE E +R L++ +IETSAKA N+ LF +IA LP E
Sbjct: 127 SRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE 172
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 122/200 (61%), Gaps = 6/200 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GNK+DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
EKR V EE +A + + ++F+ETSAK N+ LF IA +P + + T
Sbjct: 137 AEKRMVEYEEAQAYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAARNRG 196
Query: 187 VNLRSTTGNASQSQSQSSGC 206
VN++ + Q SGC
Sbjct: 197 VNVQGS------EQQPRSGC 210
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++K+V LGD SVGK+SI+ R D++ + TIG FL+KT+ ++ T++ ++WDTAGQ
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R S+ A+VVYD+ S SF+ KWIDE+R G++ II LVGNK DL
Sbjct: 68 ERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGS-GNEAIIFLVGNKCDLDN 126
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
R ++ EE E +R L++ +IETSAKA N+ LF +IA LP E
Sbjct: 127 SRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE 172
>gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas]
Length = 213
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 123/200 (61%), Gaps = 6/200 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GNK+DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAGNKSDL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
+KR V EE +A + E +++F+ETSAK N+ +F IA LP E
Sbjct: 138 AQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEG-GGPAPSRPGG 196
Query: 187 VNLRSTTGNASQSQSQSSGC 206
VNL N+ Q+Q GC
Sbjct: 197 VNL-----NSQQTQQSEGGC 211
>gi|410896506|ref|XP_003961740.1| PREDICTED: ras-related protein Rab-5B-like [Takifugu rubripes]
Length = 216
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 118/188 (62%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++
Sbjct: 15 PQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEI 74
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGN 134
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL E+R V EE + + + ++F+ETSAK N+ LF IA +P +T + T
Sbjct: 135 KADLAERRLVEFEEAQTYAEDTGLLFMETSAKTAMNVNDLFLAIAKKMPKTDTQNPTHAV 194
Query: 183 EMVDVNLR 190
VNL+
Sbjct: 195 RHRGVNLQ 202
>gi|348537690|ref|XP_003456326.1| PREDICTED: ras-related protein Rab-5B-like [Oreochromis niloticus]
Length = 216
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 121/193 (62%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
EKR V EE + + + ++F+ETSAK N+ LF IA +P +T + T
Sbjct: 139 AEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTDTQNPTHAARHRG 198
Query: 187 VNLRSTTGNASQS 199
VNL+ +++++
Sbjct: 199 VNLQDPDAHSTRA 211
>gi|440295423|gb|ELP88336.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 197
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 115/172 (66%), Gaps = 5/172 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT---VRLQLWDT 65
KYK+VF+GD SVGKT II RFM F N Y+AT+G DF SK + +D+T V+LQ+WDT
Sbjct: 6 KYKVVFIGDSSVGKTCIIGRFMSGMFVNEYEATVGTDFSSK-LVTDDKTKQTVQLQIWDT 64
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQE++ SLIPSYIR+S VAVVVYD++ R SF + +WI V++E DV + LVGNK D
Sbjct: 65 AGQEKYHSLIPSYIRESRVAVVVYDISDRDSFNDLDEWISLVKSEEKKDVFLFLVGNKND 124
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+ KR+V+ +E K+ ETSAK NI LF+ I L +E +S
Sbjct: 125 -IGKREVTQKEALDKADYYQCQSFETSAKENCNITELFKAITERLCSIEPIS 175
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 122/201 (60%), Gaps = 5/201 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GNK+DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
EKR V EE + + + ++F+ETSAK N+ LF IA +P + + T
Sbjct: 137 AEKRMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAAHNRG 196
Query: 187 VNLRSTTGNASQSQSQSSGCS 207
VN+ + S+ Q +S C
Sbjct: 197 VNV-----HGSEQQPRSGCCG 212
>gi|47213194|emb|CAF95985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 213
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 122/197 (61%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++
Sbjct: 15 PQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEI 74
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R + A+VV+D+ ++ W+ E++ + +++I L GN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETLERAKAWVKELQRQASPNIVIALAGN 134
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL E+R V EE + + E ++F+ETSAK N+ LF IA +P +T + T
Sbjct: 135 KADLAERRLVEFEEAQTYAEETGLLFMETSAKTAMNVNDLFLAIAKKMPKTDTQNPTHAV 194
Query: 183 EMVDVNLRSTTGNASQS 199
VNL+ +++++
Sbjct: 195 RHRGVNLQDPDTHSTRA 211
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 132/209 (63%), Gaps = 11/209 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS--ST 179
LV +KR VS + EA +RE ++F ETSAK N++ LF IA LP ++ +
Sbjct: 137 LVTEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLP-LDQVGPRHA 195
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + VNL S+ G +Q+ C+C
Sbjct: 196 RPGQRPGVNLTSSEGANTQTNGP---CAC 221
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 125/207 (60%), Gaps = 9/207 (4%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER+ SL P Y R + A+VVYD+ +++SF W+ E++ + +++I L GNK
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP---GMETLSSTKQ 181
DL KR V EE +A + + ++F+ETSAK N+ +F IA LP G S +
Sbjct: 136 DLANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPKGDGTGGGPSGRG 195
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
E +D+ G Q QS SSG C
Sbjct: 196 HEGIDI------GQEGQGQSVSSGLCC 216
>gi|221502146|gb|EEE27890.1| RAB, putative [Toxoplasma gondii VEG]
Length = 241
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 12/203 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 44 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQ 103
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRT-ERGSDVIIVLVGNKTDLV 127
ER+RSL P Y R ++ AVVVYD+++R SF W+ E+++ S+V+I L GNK DL
Sbjct: 104 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLA 163
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+RQV +E + + E ++F+ETSAK G N+ LF +IAAALP T++E
Sbjct: 164 AERQVPNQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALP------KTRKEHDPHA 217
Query: 188 NLRSTTGNASQSQ--SQSSGCSC 208
+ N +Q Q S SS C+C
Sbjct: 218 GFQL---NKTQEQKSSSSSWCAC 237
>gi|237839103|ref|XP_002368849.1| Rab 5 [Toxoplasma gondii ME49]
gi|211966513|gb|EEB01709.1| Rab 5 [Toxoplasma gondii ME49]
Length = 241
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 12/203 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 44 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQ 103
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRT-ERGSDVIIVLVGNKTDLV 127
ER+RSL P Y R ++ AVVVYD+++R SF W+ E+++ S+V+I L GNK DL
Sbjct: 104 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLA 163
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+RQV +E + + E ++F+ETSAK G N+ LF +IAAALP T++E
Sbjct: 164 AERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALP------KTRKEHDPHA 217
Query: 188 NLRSTTGNASQSQ--SQSSGCSC 208
+ N +Q Q S SS C+C
Sbjct: 218 GFQL---NKTQEQKSSSSSWCAC 237
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 131/213 (61%), Gaps = 15/213 (7%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++W
Sbjct: 16 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIW 75
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK
Sbjct: 76 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNK 135
Query: 124 TDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMET 175
DLV +KR + + E +RE ++F ETSAK N++ LF IA LP G
Sbjct: 136 LDLVTESPDKRAIQTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKLPLDQAGPRN 195
Query: 176 LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L +Q VNLR A+Q+Q GC+C
Sbjct: 196 LRPGQQR--AGVNLRP---EANQTQG-PGGCNC 222
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 121/200 (60%), Gaps = 6/200 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GNK+DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
EKR V EE + + + ++F+ETSAK N+ LF IA +P + + T
Sbjct: 137 AEKRMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHGAHNRG 196
Query: 187 VNLRSTTGNASQSQSQSSGC 206
VN++ + Q SGC
Sbjct: 197 VNVQGS------EQQPRSGC 210
>gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|11992279|gb|AAG42497.1|AF323991_1 small GTP-binding protein RAB5B [Oryza sativa Indica Group]
gi|108706223|gb|ABF94018.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113547459|dbj|BAF10902.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|215740565|dbj|BAG97221.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768306|dbj|BAH00535.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192105|gb|EEC74532.1| hypothetical protein OsI_10050 [Oryza sativa Indica Group]
gi|222624202|gb|EEE58334.1| hypothetical protein OsJ_09439 [Oryza sativa Japonica Group]
Length = 199
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 31 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ AVVVYD+ S +SF W+ E++ D+I+VLVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLVGNKADLH 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
E R VS +E + + + N++FIETSAK NI +F +IA LP
Sbjct: 151 ENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRLP 194
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 124/204 (60%), Gaps = 9/204 (4%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTAG
Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAG 78
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ +++SF W+ E++ + +++I L GNK DL
Sbjct: 79 QERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADLA 138
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP---GMETLSSTKQEEM 184
KR V EE +A + + ++F+ETSAK N+ +F IA LP G S + E
Sbjct: 139 NKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLPKGDGSGGGPSGRGHEG 198
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
+D+ G Q QS SSG C
Sbjct: 199 IDI------GQEGQGQSVSSGLCC 216
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 135/215 (62%), Gaps = 16/215 (7%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQ 61
P + A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ +
Sbjct: 11 PGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFE 70
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L G
Sbjct: 71 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAG 130
Query: 122 NKTDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV +KR ++ + EA ++E ++F ETSAK N+K LF IA LP G
Sbjct: 131 NKLDLVTENPDKRAIATADAEAYAKEAGLLFFETSAKTNTNVKELFTAIAKKLPLDQAGP 190
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L + + V+LR A+ +Q ++GCSC
Sbjct: 191 RNLRTNARP---GVDLRP---EAAGTQG-ANGCSC 218
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 114/176 (64%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 13 APQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAG 132
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
NK+DL KR V EE +A + E ++F+ETSAK N+ +F IA LP E S
Sbjct: 133 NKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSEVSS 188
>gi|365758386|gb|EHN00232.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 209
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 119/201 (59%), Gaps = 3/201 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-- 128
F SL P Y R++ A+VVYDV QSF+ W+ E+ + D+II LVGNK D+++
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDVLQDG 128
Query: 129 -KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+R+V+ EEGE + E ++F ETSAK G N+ +F I +P + E
Sbjct: 129 GERKVAKEEGEKLAEEKGLLFFETSAKTGENVNNVFLGIGEKIPLKKAEEQNNANEGESN 188
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
N R A+ S +S CSC
Sbjct: 189 NQRVDLNAANNGTSANSACSC 209
>gi|449298295|gb|EMC94310.1| hypothetical protein BAUCODRAFT_544119 [Baudoinia compniacensis
UAMH 10762]
Length = 227
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 16/215 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+D+T V+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDQTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 135
Query: 126 LVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP--------GM 173
L E KR + + EA +RE ++F ETSAK N+K LF IA LP GM
Sbjct: 136 LAESDPSKRAIEKADAEAYAREAGLLFFETSAKTSENVKELFTAIAKKLPIEQASQRGGM 195
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + + VD+ R G + + GC+C
Sbjct: 196 RSAAGGR-PGGVDLGNRQAGGQT--TAGAAGGCNC 227
>gi|123401208|ref|XP_001301812.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736246|gb|AAX97452.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121883039|gb|EAX88882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K K+VFLG VGKTS++ R M D+F N Y TIG+DF +K + ++ RTV LQ+WDTAGQ
Sbjct: 4 KCKVVFLGSAGVGKTSLLNRLMTDEFSNQYNTTIGVDFFTKPVQVQGRTVTLQIWDTAGQ 63
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERF+SL+PSYIRDSSVAV+VYDV+ +SF +W + V ERG++ VLVGNK DL
Sbjct: 64 ERFKSLMPSYIRDSSVAVIVYDVSDEKSFDEAQEWYETVMHERGNEAKCVLVGNKIDLER 123
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+ + + AK R++ IETSAK + LF+ I+ P
Sbjct: 124 RVDLKHVDDFAKPRQMQT--IETSAKTSSGVARLFKLISELAP 164
>gi|367007916|ref|XP_003688687.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
gi|357526997|emb|CCE66253.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
Length = 213
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S +A KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + ++D T++ ++WD
Sbjct: 3 SNVASVKLVLLGEAAVGKSSIVVRFVSNDFSENKEPTIGAAFLTQRVNIDDHTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYDV QSF+ W+ E+ + D++I L GNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHWVKELHEQASGDIVIALAGNKV 122
Query: 125 DLVE-----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
DL+E +R+V+ EEG+ + E N++F ETSAK G+N+ +F + +P
Sbjct: 123 DLIEENGENERKVATEEGQKLADEENLLFFETSAKTGYNVNEIFLAVGDKIP 174
>gi|72165047|ref|XP_783878.1| PREDICTED: ras-related protein Rab-5B-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 124/207 (59%), Gaps = 14/207 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNQETFGRAKTWVKELQRQASPNIVIALAGNKADL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-----GMETLSSTKQ 181
KR V EE +A + E +++F+ETSAK N+ +F IA LP G T
Sbjct: 137 ANKRMVEFEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNDQVGGPTSGQRGT 196
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
VD+ ++S QSSG C
Sbjct: 197 NRGVDL---------TESNQQSSGGCC 214
>gi|356576246|ref|XP_003556244.1| PREDICTED: ras-related protein RABF1 [Glycine max]
Length = 200
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 113/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLL 151
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V++++G + + ++ FIETSAK NI LF +IA LP
Sbjct: 152 EKREVAVQDGTDYAEKNDMFFIETSAKTADNINELFEEIAKRLP 195
>gi|384499462|gb|EIE89953.1| hypothetical protein RO3G_14664 [Rhizopus delemar RA 99-880]
Length = 193
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 123/198 (62%), Gaps = 19/198 (9%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+SIIT+++ D F + TIG FL+K +EDR ++ +WDTAGQER
Sbjct: 15 KLVLLGDSSVGKSSIITKYVTDTFIEGREVTIGAAFLAKICSIEDRIIKFDIWDTAGQER 74
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
FRSL P Y R+++ A++V+DV + SF +W+DE+ DV+I LVGNK DL + R
Sbjct: 75 FRSLAPMYYRNAAAAMIVFDVTNYNSFTGAKRWVDELPL----DVMIALVGNKIDLEQDR 130
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLR 190
QVS++E + E ++++IETSA+ G NI +F +IA +P L +TK + +N++
Sbjct: 131 QVSVDEIKEYVAEKDLIYIETSARLGINIHHVFNEIAKNVP----LKTTKTQT---INIK 183
Query: 191 STTGNASQSQSQSSGCSC 208
Q C+C
Sbjct: 184 --------DNHQHHSCAC 193
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 117/170 (68%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKAD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR VS + EA ++E N++F ETSAK N+K LF IA LP
Sbjct: 137 LVAEQPDKRAVSTADAEAYAKEANLLFFETSAKTAENVKELFTAIAKKLP 186
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 116/170 (68%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKAD 135
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR V + EA +RE N++F ETSAK N+K LF IA LP
Sbjct: 136 LVAEQPDKRAVPTADAEAYAREANLLFFETSAKTAENVKELFTAIAKKLP 185
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 130/213 (61%), Gaps = 15/213 (7%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S +A KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + ++T++ ++WD
Sbjct: 3 SNVASIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMGNQTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SL P Y R++ A+VVYD+ QSF+ W+ E+ + +II LVGNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKSIIIALVGNKL 122
Query: 125 DLV---EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME------T 175
DL+ E+R+V+ EE E+ ++E ++F ETSAK G N+ +F I +P +
Sbjct: 123 DLLESDEERKVAREEAESLAQEEGLLFFETSAKTGDNVNEVFLGIGEKIPLKQQEVQNGN 182
Query: 176 LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+S + VD+N+ ++G + SSGC+C
Sbjct: 183 GASVNEVSRVDLNVAGSSG------ANSSGCNC 209
>gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein RAB5B [Oryza sativa]
gi|5931625|dbj|BAA84717.1| rab5B [Oryza sativa Japonica Group]
Length = 199
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 31 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ AVVVYD+ S +SF W+ E++ D+I+VLVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLVGNKADLH 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R VS +E + + + N++FIETSAK NI +F +IA LP
Sbjct: 151 KNRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRLP 194
>gi|449444622|ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
gi|449490416|ref|XP_004158599.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
Length = 199
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S SF W+ E++ D+I+ LVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALVGNKADLQ 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V++++G + + + FIETSAK NI LF +IA LP
Sbjct: 151 EKRKVTVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLP 194
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 124/207 (59%), Gaps = 8/207 (3%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 ATMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSG 133
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR V E+ ++ + + ++F+ETSAK N+ +F IA LP + +Q
Sbjct: 134 NKADLASKRMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIAKKLPKSDNTPGGQQ 193
Query: 182 EEMVD--VNLRSTTGNASQSQSQSSGC 206
+ VNLR T S S GC
Sbjct: 194 SSQRNQGVNLRET------SPQHSGGC 214
>gi|17066210|emb|CAD12439.1| Rab5c GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 117/182 (64%), Gaps = 4/182 (2%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+RSL P Y R +S AV+VYD+ +++SF WI E+++ +D+II L GNK DL E R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKNDLEEHR 148
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLR 190
V E E+ + N++FIETSAK G N+ LF +IA LP L +QE+ + +
Sbjct: 149 AVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP----LHKKEQEKCPAIQIN 204
Query: 191 ST 192
+T
Sbjct: 205 NT 206
>gi|406604593|emb|CCH43933.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 239
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 125/200 (62%), Gaps = 3/200 (1%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRL 60
+P + A++KLV LG+ +VGK+S++ RF+ D FD+ ++TIG FL++T+ L+D T ++
Sbjct: 38 SPETRFAQFKLVLLGESAVGKSSVVHRFVKDSFDDFRESTIGAAFLTQTIQLDDTTTIKF 97
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
++WDTAGQER++SL P Y R+++ A+VVYD+ S W E++ + D++I L
Sbjct: 98 EIWDTAGQERYKSLAPMYYRNANAAIVVYDITQESSLERAKAWTKELQRQANQDIVIALA 157
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNK DL +RQV E E + E ++F E SAK+G IK +F KIA LP L +
Sbjct: 158 GNKVDLESQRQVPKEIAETFASEEGLLFFEVSAKSGEGIKEIFTKIAEKLPLESQLKPNR 217
Query: 181 -QEEMVDVNLRSTTGNASQS 199
Q + VD+ R +T N S
Sbjct: 218 LQNKGVDLQ-RPSTNNQKNS 236
>gi|327276980|ref|XP_003223244.1| PREDICTED: ras-related protein Rab-5B-like [Anolis carolinensis]
Length = 215
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 115/175 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + +++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E S+
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQST 189
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 135/215 (62%), Gaps = 16/215 (7%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQ 61
P + A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ +
Sbjct: 11 PGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFE 70
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L G
Sbjct: 71 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAG 130
Query: 122 NKTDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV +KR ++ + EA ++E ++F ETSAK N+K LF IA LP G
Sbjct: 131 NKLDLVTENPDKRAIATADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKLPLDQAGP 190
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L + + V+LR A+ +Q ++GC+C
Sbjct: 191 RNLRTNTRP---GVDLRP---EAAGTQG-ANGCAC 218
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 17/215 (7%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQ 61
P + A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ +
Sbjct: 11 PGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFE 70
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L G
Sbjct: 71 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAG 130
Query: 122 NKTDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV +KR + + EA +RE ++F ETSAK N++ LF IA LP G
Sbjct: 131 NKLDLVTDSPDKRAIQTVDAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGP 190
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L S + V+LR Q++ CSC
Sbjct: 191 RNLRSNPRP---GVDLRPEAAG-----PQANSCSC 217
>gi|326436303|gb|EGD81873.1| RAB5C protein [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 127/199 (63%), Gaps = 10/199 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T V+ ++WDTAG
Sbjct: 11 QFKLVLLGETAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDGTKVKFEIWDTAG 70
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ S SFL W+ E++ + + +I L GNK DL
Sbjct: 71 QERYHSLAPMYYRGAQAAIVVYDITSHASFLRAKSWVKELQKQAENVAVIALAGNKADLA 130
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+R+V EE EA ++E ++F+ETSAK FN+ +F IA LP + T++ + V
Sbjct: 131 ARREVQTEEVEAYAQEEKLLFMETSAKTAFNVVEIFAAIAKHLPKNQ---DTRRGD--GV 185
Query: 188 NLRSTTGNASQSQSQSSGC 206
NLR A ++++S GC
Sbjct: 186 NLR----RAEAAEAKSGGC 200
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 18 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 77
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 78 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 137
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR VS + EA +RE ++F ETSAK N+K LF IA LP
Sbjct: 138 LVNEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVKDLFTAIAKKLP 187
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 17/211 (8%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV +KR + + EA +RE ++F ETSAK+ N++ LF IA LP G L
Sbjct: 135 LVMDSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
S + V+LR Q++ CSC
Sbjct: 195 SNPRP---GVDLRPEAAG-----PQANNCSC 217
>gi|145508972|ref|XP_001440430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834482|emb|CAI44559.1| rab_A51 [Paramecium tetraurelia]
gi|124407647|emb|CAK73033.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K KLVFLG+ VGKTSII RF+ + FD Q T+GIDF+ K + ++ + +RL LWDTAGQ
Sbjct: 8 KQKLVFLGNSYVGKTSIIERFVSNTFDPKSQPTVGIDFIGKNITIDGKNMRLLLWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERF SLIP Y+RD+ A++V+DV SR SF + +W +EV+ RG++ IV++GNK D
Sbjct: 68 ERFHSLIPGYVRDAQCAIIVFDVTSRHSFESLDRWFNEVKQTRGNEAAIVILGNKIDA-- 125
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
+R +S +E + + ++++ E SAK G I+ +I ALP
Sbjct: 126 ERVISSQEARDYAMKKDILYYEVSAKTGKGIEEAMEQICLALPA 169
>gi|84626822|gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
Length = 200
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
K KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 KVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVVVYD+ S +SF W+ E++ D+++ LVGNK DL
Sbjct: 92 QERYAALAPLYYRGAAVAVVVYDITSPESFAKAQYWVKELQKHGSPDIVMALVGNKADLH 151
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V+ ++G + + + FIETSAK NI LF +IA LP
Sbjct: 152 EKREVTTQDGIDCAEKNGMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113693|gb|EDO15242.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 126/209 (60%), Gaps = 5/209 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + ++D TV+ ++WD
Sbjct: 3 SNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIDDHTVKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SL P Y R++ A+VVYDV+ QSF+ W+ E++ SD+II L GNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDVSKPQSFIKARHWVKELQERASSDIIIALAGNKV 122
Query: 125 DLVE---KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP--GMETLSST 179
D+VE +R+V+ EEG+ + E ++F ETSAK G N+ +F I +P ++
Sbjct: 123 DIVEDGGERKVATEEGQKLADEEGLLFFETSAKTGQNVNEVFLAIGEKIPIKKPNEHANN 182
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ + N R ++ + + SGC+C
Sbjct: 183 ANADGSNDNNRVDITSSDNNAAAVSGCNC 211
>gi|90079481|dbj|BAE89420.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 113/171 (66%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F+ W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFVRAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|387017972|gb|AFJ51104.1| ras-related protein Rab-5B-like [Crotalus adamanteus]
Length = 214
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 114/174 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + +++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E S
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQS 188
>gi|399217553|emb|CCF74440.1| unnamed protein product [Babesia microti strain RI]
Length = 226
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 109/167 (65%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SA +YKLV LG+ +VGK+ + TRF D F + +TIG F++KT+ LE V+ ++WD
Sbjct: 43 SATYQYKLVLLGETAVGKSCLTTRFCKDVFLDYQDSTIGAAFMTKTINLESSVVKFEIWD 102
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER+RSL P Y R +S A++VYD+ S +F WI+E++ +DVII L GNK
Sbjct: 103 TAGQERYRSLAPMYYRGASAALIVYDITSADTFEQARSWINELKAVSRADVIIALAGNKV 162
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
DL R V IE + ++ N +F+ETSAK G N++ +F KIA LP
Sbjct: 163 DLERNRSVDIETAQNFAKLNNCLFMETSAKTGHNVQEMFMKIANLLP 209
>gi|124505771|ref|XP_001350999.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
gi|23510642|emb|CAD49027.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+RSL P Y R +S AV+VYD+ +++SF WI E+++ +D+II L GNK DL E R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKNDLEEHR 148
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLR 190
V E E+ + N++FIETSAK G N+ LF +IA LP L +QE + +
Sbjct: 149 AVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP----LHKKEQERCPAIQIN 204
Query: 191 ST 192
+T
Sbjct: 205 NT 206
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 115/176 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E S++
Sbjct: 135 ADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTS 190
>gi|223995249|ref|XP_002287308.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220976424|gb|EED94751.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 193
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 108/165 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 5 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTA 64
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A+VVYD+ + SF W+ E++ DV+I + GNK DL
Sbjct: 65 GQERYRSLAPMYYRGAAAAIVVYDITNPDSFAGAKSWVKELQRRGDQDVVIAMAGNKADL 124
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQV EE A + E ++ +ETSAK N+K LF +IA LP
Sbjct: 125 EARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLP 169
>gi|6324663|ref|NP_014732.1| Vps21p [Saccharomyces cerevisiae S288c]
gi|549795|sp|P36017.1|VPS21_YEAST RecName: Full=Vacuolar protein sorting-associated protein 21;
AltName: Full=GTP-binding protein YPT51; AltName:
Full=Vacuolar protein-targeting protein 12
gi|441477|emb|CAA82543.1| VPS21 product [Saccharomyces cerevisiae]
gi|483567|emb|CAA53769.1| ypt51p [Saccharomyces cerevisiae]
gi|1164935|emb|CAA64010.1| YOR3154c [Saccharomyces cerevisiae]
gi|1420257|emb|CAA99285.1| VPS21 [Saccharomyces cerevisiae]
gi|151945713|gb|EDN63954.1| small GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190407421|gb|EDV10688.1| vacuolar protein sorting-associated protein 21 [Saccharomyces
cerevisiae RM11-1a]
gi|207341191|gb|EDZ69312.1| YOR089Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272985|gb|EEU07949.1| Vps21p [Saccharomyces cerevisiae JAY291]
gi|259149571|emb|CAY86375.1| Vps21p [Saccharomyces cerevisiae EC1118]
gi|285814973|tpg|DAA10866.1| TPA: Vps21p [Saccharomyces cerevisiae S288c]
gi|323302866|gb|EGA56670.1| Vps21p [Saccharomyces cerevisiae FostersB]
gi|323307162|gb|EGA60445.1| Vps21p [Saccharomyces cerevisiae FostersO]
gi|323331470|gb|EGA72885.1| Vps21p [Saccharomyces cerevisiae AWRI796]
gi|323335502|gb|EGA76787.1| Vps21p [Saccharomyces cerevisiae Vin13]
gi|323346523|gb|EGA80810.1| Vps21p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352075|gb|EGA84612.1| Vps21p [Saccharomyces cerevisiae VL3]
gi|349581251|dbj|GAA26409.1| K7_Vps21p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763044|gb|EHN04575.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296418|gb|EIW07520.1| Vps21p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 210
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 8/204 (3%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-- 128
F SL P Y R++ A+VVYDV QSF+ W+ E+ + D+II LVGNK D+++
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 128
Query: 129 -KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP---GMETLSSTKQEEM 184
+R+V+ EEGE + E ++F ETSAK G N+ +F I +P E S++ + E
Sbjct: 129 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLKTAEEQNSASNERE- 187
Query: 185 VDVNLRSTTGNASQSQSQSSGCSC 208
N R A+ S +S CSC
Sbjct: 188 -SNNQRVDLNAANDGTSANSACSC 210
>gi|255718227|ref|XP_002555394.1| KLTH0G08206p [Lachancea thermotolerans]
gi|238936778|emb|CAR24957.1| KLTH0G08206p [Lachancea thermotolerans CBS 6340]
Length = 212
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 111/170 (65%), Gaps = 3/170 (1%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SAL KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + D T++ ++WD
Sbjct: 3 SALTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMGDHTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SL P Y R++ A+VVYDV QSF+ W+ E+R + D+II LVGNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELREQASKDIIIALVGNKL 122
Query: 125 DLVE---KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
D+VE +R+V++EE E + + ++F ETSAK G N+ +F I +P
Sbjct: 123 DMVETGAERKVALEEAENLASQEGLLFFETSAKTGSNVNEVFLAIGQKIP 172
>gi|340500595|gb|EGR27462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 169
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 94/119 (78%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+KT++++D+++RLQLWDTAG
Sbjct: 18 VKHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRLQLWDTAG 77
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
QERFRSLIPSY+RD++ AV+V+DV S++SF + KW+ + + RG + ++ NKTDL
Sbjct: 78 QERFRSLIPSYLRDATCAVIVFDVTSQESFNSIDKWVKDYKDHRGPEAPCIIGANKTDL 136
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 131/213 (61%), Gaps = 16/213 (7%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+D T V+ ++W
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDNTTVKFEIW 73
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIVIALAGNK 133
Query: 124 TDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMET 175
DLV +KR + + E +RE ++F ETSAK N++ LF IA LP G
Sbjct: 134 LDLVTENPDKRAIPAADAEQYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGPRN 193
Query: 176 LSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ S + VD+ +T+G ++GC+C
Sbjct: 194 IRSGPR-PGVDLRPEATSGQG------AAGCNC 219
>gi|25304086|gb|AAH40143.1| RAB5B protein, partial [Homo sapiens]
Length = 267
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 67 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 126
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 127 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 186
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 187 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 237
>gi|344229410|gb|EGV61296.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229411|gb|EGV61297.1| hypothetical protein CANTEDRAFT_116954 [Candida tenuis ATCC 10573]
Length = 213
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 121/203 (59%), Gaps = 8/203 (3%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + D+T++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDKTIKYEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK- 129
F SL P Y R++ A+VVYD+ SFL W+ E+ + D+ I LVGNK DLVE
Sbjct: 71 FASLAPMYYRNAQAALVVYDITKPASFLKARHWVKELHEQASKDITIALVGNKYDLVEDE 130
Query: 130 ------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 183
R+VS+EEG+ + + ++F ETSAK +N+ +F I +P + +Q
Sbjct: 131 NDGDTLRKVSVEEGQKLAEDEGLLFFETSAKTSYNVNEVFVGIGTKIPESSAPTGVQQAG 190
Query: 184 MVDVNLRSTTGNASQSQSQSSGC 206
+ TTG AS +Q Q+SGC
Sbjct: 191 NEAGRIDLTTGAASTTQ-QTSGC 212
>gi|403273236|ref|XP_003928426.1| PREDICTED: ras-related protein Rab-5B-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAHAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus]
gi|388498868|gb|AFK37500.1| unknown [Lotus japonicus]
Length = 200
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGNPDIVMALVGNKADLL 151
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V++++G + + + FIETSAK NI LF +IA LP
Sbjct: 152 EKREVAVQDGIDYAEKNGMFFIETSAKTADNINELFEEIAKRLP 195
>gi|355714962|gb|AES05178.1| RAB5B, member RAS oncoprotein family [Mustela putorius furo]
Length = 246
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 47 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 106
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 107 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 166
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 167 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 217
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 113/172 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
KR V +E +A + + +++F+ETSAK N+ +F IA LP E S+
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQSA 189
>gi|321448228|gb|EFX61364.1| hypothetical protein DAPPUDRAFT_69789 [Daphnia pulex]
Length = 141
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 101/132 (76%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K+VF+GDQSVGK+SII RF+ ++FD+ + T+GIDF+SK + +++++VRLQLWDTAGQ
Sbjct: 1 KFKIVFIGDQSVGKSSIINRFIKNEFDSAHNPTVGIDFVSKNVTVKEKSVRLQLWDTAGQ 60
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFRSLIP Y+RDS +V+DV + SF N + W+D V+ RG DV IV++ NK D VE
Sbjct: 61 ERFRSLIPGYLRDSHAVFLVFDVTNADSFQNLNMWLDYVKENRGEDVAIVIIANKIDQVE 120
Query: 129 KRQVSIEEGEAK 140
+R VS + + K
Sbjct: 121 ERAVSSADAKEK 132
>gi|157117083|ref|XP_001658691.1| rab5 [Aedes aegypti]
gi|108876182|gb|EAT40407.1| AAEL007845-PA [Aedes aegypti]
Length = 214
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 121/200 (60%), Gaps = 10/200 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ ++WDTA
Sbjct: 22 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTA 81
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ SF W+ E++ + +++I L GNK DL
Sbjct: 82 GQERYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGNKADL 141
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
V KR V EE + + E ++F+ETSAK N+ +F I LP E +
Sbjct: 142 VNKRMVDYEEAKQYADENGLLFMETSAKTAVNVNDIFLAIGKKLPKNEGAGQQQ------ 195
Query: 187 VNLRSTTGNASQSQSQSSGC 206
N+R T S+ Q+SGC
Sbjct: 196 -NIRPTQNEQSR---QNSGC 211
>gi|190345894|gb|EDK37861.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 14/207 (6%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK- 129
F SL P Y R++ A+VVYD+ SF+ W+ E+ + D+ I LVGNK DLVE
Sbjct: 71 FASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKHDLVEDD 130
Query: 130 --------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
R+VSIEEG+ + E ++F ETSAK +N+ +F I + +P + S +Q
Sbjct: 131 NDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPEAPS-SKPQQ 189
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ D + +TG A + GC+C
Sbjct: 190 PQATDGRIDLSTGTAPAAD----GCAC 212
>gi|440897250|gb|ELR48982.1| Ras-related protein Rab-5B, partial [Bos grunniens mutus]
Length = 227
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 27 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 86
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 87 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 146
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 147 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 197
>gi|301760474|ref|XP_002916104.1| PREDICTED: ras-related protein Rab-5B-like [Ailuropoda melanoleuca]
gi|281353251|gb|EFB28835.1| hypothetical protein PANDA_004070 [Ailuropoda melanoleuca]
Length = 215
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|294942675|ref|XP_002783640.1| rab6, putative [Perkinsus marinus ATCC 50983]
gi|239896142|gb|EER15436.1| rab6, putative [Perkinsus marinus ATCC 50983]
Length = 392
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 118/168 (70%), Gaps = 5/168 (2%)
Query: 43 GIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTS 101
GIDF++K + L+D R+V+LQLWDTAGQERFRSLIP+Y+RD++ VVV+D+ S +SF +
Sbjct: 228 GIDFVAKVLTLDDGRSVKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLTSEESFNSVR 287
Query: 102 KWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKP 161
W+ +V E+GS V IVLVGNK D+ + RQVS EE A + EL V + ETSAK+G +I+
Sbjct: 288 SWMSQVEDEKGSGVKIVLVGNKADMADSRQVSGEEARALAGELGVRYFETSAKSGVDIEQ 347
Query: 162 LFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNA-SQSQSQSSGCSC 208
+F +IA ++PG + S+ Q +R T+G+ + + ++S CSC
Sbjct: 348 IFTEIAKSIPGENSASAGSQGSDT---IRVTSGDGMNNTATKSQSCSC 392
>gi|402886385|ref|XP_003906610.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Papio anubis]
gi|402886387|ref|XP_003906611.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Papio anubis]
gi|355564343|gb|EHH20843.1| Ras-related protein Rab-5B [Macaca mulatta]
gi|355786201|gb|EHH66384.1| Ras-related protein Rab-5B [Macaca fascicularis]
gi|380787145|gb|AFE65448.1| ras-related protein Rab-5B isoform 1 [Macaca mulatta]
gi|383410993|gb|AFH28710.1| ras-related protein Rab-5B [Macaca mulatta]
gi|384940030|gb|AFI33620.1| ras-related protein Rab-5B [Macaca mulatta]
Length = 215
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 131/215 (60%), Gaps = 16/215 (7%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQ 61
P + A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ +
Sbjct: 11 PGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFE 70
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L G
Sbjct: 71 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAG 130
Query: 122 NKTDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV +KR + + EA +RE ++F ETSAK N+K LF IA LP G
Sbjct: 131 NKLDLVTEHPDKRAIPTADAEAYAREAGLLFFETSAKTSTNVKELFAAIAKKLPLDQAGP 190
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L +T + V+LR A +Q + C+C
Sbjct: 191 RNLRTTPRP---GVDLRP---EAPGTQG-AGACNC 218
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR V E EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 137 LVTEQPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKLP 186
>gi|402470455|gb|EJW04677.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 194
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 112/162 (69%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YKLV LG SVGK+S++ +++ +F+ ++TIG F +KT+ L+D V+ ++WDTAGQE
Sbjct: 11 YKLVVLGYYSVGKSSLVMKYVKREFNPNEESTIGAAFCAKTVQLKDCNVKYEIWDTAGQE 70
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
R+ SLIP Y R + VA++VYD+ + QSF KW+DE++ E+ D + VLVGNK+DL
Sbjct: 71 RYNSLIPMYYRGAQVALIVYDITNPQSFTCAKKWVDELKEEKPKDFLKVLVGNKSDLDAS 130
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R++ E+G + + ++F ETSAK G+N+ +F +A+ LP
Sbjct: 131 RKIHFEDGLNYAEQNGLLFYETSAKTGYNVDKIFEDVASILP 172
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 116/170 (68%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKAD 135
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR V + EA ++E N++F ETSAK N+K LF IA LP
Sbjct: 136 LVAEQPDKRAVPTTDAEAYAKEANLLFFETSAKTAENVKELFTAIAKKLP 185
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 116/170 (68%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 14 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 73
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 74 AGQERYKSLAPMYYRNANCAVVVYDITQAASLEKAKAWVKELQRQANENIIIALAGNKAD 133
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR VS + EA ++E ++F ETSAK N+K LF IA LP
Sbjct: 134 LVAEQPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVKELFTAIAKKLP 183
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 116/157 (73%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K+V +GD +VGK++++TR+ ++F++ +ATIG++F +++M + + V+ Q+WDTAGQE
Sbjct: 14 FKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEVKAQVWDTAGQE 73
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ +Y R + A+VVYD+ +Q+F N SKW+DE+RT GS V+ +LVGNK DL +
Sbjct: 74 RFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDLTDI 133
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
R+VS+EEG+ + N+ F+ETSA A N+K F+ +
Sbjct: 134 REVSVEEGKELAESENLFFMETSALASTNVKTAFQNV 170
>gi|354488169|ref|XP_003506243.1| PREDICTED: ras-related protein Rab-5B-like [Cricetulus griseus]
gi|344256418|gb|EGW12522.1| Ras-related protein Rab-5B [Cricetulus griseus]
Length = 215
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella]
Length = 215
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 123/205 (60%), Gaps = 8/205 (3%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++W
Sbjct: 15 VGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALSGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ-- 181
DL KR V EE + + E ++F+ETSAK N+ +F IA LP + Q
Sbjct: 135 ADLSSKRMVDYEEAQTYAEENGLLFMETSAKTAMNVNDIFLAIAKKLPKSDNTQGGPQAA 194
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGC 206
+ V+L+ T +Q SSGC
Sbjct: 195 QRQRGVDLQET------NQQSSSGC 213
>gi|417408967|gb|JAA51011.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 242
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 42 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 101
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 102 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 161
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 162 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 212
>gi|4506371|ref|NP_002859.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|28916687|ref|NP_803130.1| ras-related protein Rab-5B isoform 1 [Mus musculus]
gi|197099504|ref|NP_001125512.1| ras-related protein Rab-5B [Pongo abelii]
gi|354725902|ref|NP_001238965.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|73968313|ref|XP_531627.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Canis lupus
familiaris]
gi|291389411|ref|XP_002711110.1| PREDICTED: RAB5B, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|332207599|ref|XP_003252883.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Nomascus
leucogenys]
gi|332839019|ref|XP_003313654.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan troglodytes]
gi|344266193|ref|XP_003405165.1| PREDICTED: ras-related protein Rab-5B-like [Loxodonta africana]
gi|348580964|ref|XP_003476248.1| PREDICTED: ras-related protein Rab-5B-like [Cavia porcellus]
gi|390467774|ref|XP_002752642.2| PREDICTED: ras-related protein Rab-5B [Callithrix jacchus]
gi|397509152|ref|XP_003825000.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan paniscus]
gi|397509154|ref|XP_003825001.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan paniscus]
gi|410046526|ref|XP_003952209.1| PREDICTED: ras-related protein Rab-5B [Pan troglodytes]
gi|410964757|ref|XP_003988919.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Felis catus]
gi|426224979|ref|XP_004006646.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Ovis aries]
gi|46577637|sp|P61020.1|RAB5B_HUMAN RecName: Full=Ras-related protein Rab-5B
gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B
gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B
gi|20379050|gb|AAM21085.1|AF498937_1 small GTP binding protein RAB5B [Homo sapiens]
gi|35839|emb|CAA38653.1| ras related protein Rab5b [Homo sapiens]
gi|871435|emb|CAA59016.1| rab5b [Mus musculus]
gi|26349073|dbj|BAC38176.1| unnamed protein product [Mus musculus]
gi|31873318|emb|CAD97650.1| hypothetical protein [Homo sapiens]
gi|45708723|gb|AAH32740.1| RAB5B protein [Homo sapiens]
gi|49456341|emb|CAG46491.1| RAB5B [Homo sapiens]
gi|55728309|emb|CAH90899.1| hypothetical protein [Pongo abelii]
gi|117645878|emb|CAL38406.1| hypothetical protein [synthetic construct]
gi|119617268|gb|EAW96862.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617269|gb|EAW96863.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|127797687|gb|AAH50558.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798430|gb|AAH56422.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798643|gb|AAH65298.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|148692650|gb|EDL24597.1| RAB5B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|158258631|dbj|BAF85286.1| unnamed protein product [Homo sapiens]
gi|187952647|gb|AAI37575.1| RAB5B, member RAS oncogene family [Mus musculus]
gi|208967242|dbj|BAG73635.1| RAB5B, member RAS oncogene family [synthetic construct]
gi|223459814|gb|AAI37576.1| Rab5b protein [Mus musculus]
gi|410217062|gb|JAA05750.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410268074|gb|JAA22003.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410299464|gb|JAA28332.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410340889|gb|JAA39391.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|444518222|gb|ELV12033.1| Ras-related protein Rab-5B [Tupaia chinensis]
Length = 215
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|329664122|ref|NP_001193120.1| ras-related protein Rab-5B [Bos taurus]
gi|296487563|tpg|DAA29676.1| TPA: RAB5B, member RAS oncogene family-like [Bos taurus]
Length = 215
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|3153154|emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crystallinum]
Length = 201
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR-TVRLQLWDTAG 67
K KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D TV+ ++WDTAG
Sbjct: 33 KVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSSTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S +SF W+ E++ D+I+ LVGNK DL
Sbjct: 93 QERYAALAPLYYRGAAVAVIVYDITSPESFTKAQYWVKELQKHGSPDIIMALVGNKADLQ 152
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
E+R+V ++G + + + FIETSAK NI LF +IA LP
Sbjct: 153 ERREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 196
>gi|219111761|ref|XP_002177632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410517|gb|EEC50446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 107/163 (65%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ L+D TV+ ++WDTAGQ
Sbjct: 15 HFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDATVKFEIWDTAGQ 74
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+RSL P Y R +S A+VVYD+ + SF W+ E++ +V+I L GNK DL
Sbjct: 75 ERYRSLAPMYYRGASAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAGNKADLET 134
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+R V EE A ++E ++ +ETSAK N+K LF +IA LP
Sbjct: 135 RRAVEFEEANAYAQENGILHLETSAKNANNVKSLFIEIAKTLP 177
>gi|112292957|dbj|BAF02856.1| Rab5B [Mus musculus]
Length = 229
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 29 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 88
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 89 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 148
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 149 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 199
>gi|121583768|ref|NP_001073405.1| ras-related protein Rab-5B [Rattus norvegicus]
gi|120537414|gb|AAI29102.1| RAB5B, member RAS oncogene family [Rattus norvegicus]
gi|149029654|gb|EDL84825.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 215
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|149756750|ref|XP_001504847.1| PREDICTED: ras-related protein Rab-5B-like [Equus caballus]
Length = 215
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|395540530|ref|XP_003772206.1| PREDICTED: ras-related protein Rab-5B [Sarcophilus harrisii]
Length = 215
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|60826707|gb|AAX36768.1| RAB5B member RAS oncogene family [synthetic construct]
Length = 216
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|260807647|ref|XP_002598620.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
gi|229283893|gb|EEN54632.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
Length = 213
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 16 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GNK DL
Sbjct: 76 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQASPNIVIALSGNKADL 135
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST-KQEEMV 185
KR V EE +A + + +++F+ETSAK N+ +F IA LP E Q +
Sbjct: 136 ANKRMVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKLPKNEPAGGAGNQAQGR 195
Query: 186 DVNLRSTTGNASQSQSQSSGC 206
V+L+ TGN Q SS C
Sbjct: 196 RVDLKE-TGN----QQASSTC 211
>gi|291001341|ref|XP_002683237.1| rab family small GTPase [Naegleria gruberi]
gi|284096866|gb|EFC50493.1| rab family small GTPase [Naegleria gruberi]
Length = 213
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 123/204 (60%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + +KLV LG+ SVGK+S++ RF+ +F ++TIG FL++T+ L D V+ ++
Sbjct: 8 PNAKSVPFKLVLLGESSVGKSSLVLRFVRGQFFEYQESTIGAAFLTQTVPLGDTIVKFEI 67
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER++SL P Y R ++ A+VVYD+ S SF W+ E++ + ++++I L GN
Sbjct: 68 WDTAGQERYKSLAPMYYRGAAAAIVVYDITSADSFQRAKNWVKELQRQGTTNIVIALAGN 127
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL +KRQV E ++ + + ++F+ETSAKA N+ LF IA LP ET ++
Sbjct: 128 KVDLEDKRQVESAEAKSYAEDNGLLFMETSAKAATNVNELFVAIARKLPSKETDNNNNVN 187
Query: 183 EMVDVNLRSTTGNASQSQSQSSGC 206
+ + G+ + Q GC
Sbjct: 188 SDLTPAIIPKPGDQPPERKQKGGC 211
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 126/208 (60%), Gaps = 10/208 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W+ E++ + D+II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVIVYDITQSSSLDKAKAWVKELQRQAKEDIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV +KR + + EA +RE ++F ETSAK N++ LF IA LP T+
Sbjct: 137 LVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGPRHTR 196
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ V+L N + S CSC
Sbjct: 197 PGQRPGVSLTPENANT----NVSGPCSC 220
>gi|388518999|gb|AFK47561.1| unknown [Medicago truncatula]
Length = 199
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+ YD+ S +SF W+ E++ D+++ LVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQ 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V++E+G + + + FIETSAK NI LF +IA LP
Sbjct: 151 EKREVAVEDGMDYAEKNGMFFIETSAKTADNINELFEEIAKRLP 194
>gi|335307623|ref|XP_003360910.1| PREDICTED: ras-related protein Rab-5B-like [Sus scrofa]
Length = 215
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|54020962|ref|NP_001005723.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49522606|gb|AAH75323.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 113/171 (66%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + +++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLTSKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKTE 185
>gi|146420668|ref|XP_001486288.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 14/207 (6%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK- 129
F SL P Y R++ A+VVYD+ SF+ W+ E+ + D+ I LVGNK DLVE
Sbjct: 71 FASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKHDLVEDD 130
Query: 130 --------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
R+VSIEEG+ + E ++F ETSAK +N+ +F I + +P L +Q
Sbjct: 131 NDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIPEAPLLKP-QQ 189
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ D + +TG A + GC+C
Sbjct: 190 PQATDGRIDLSTGTA----PAADGCAC 212
>gi|351703636|gb|EHB06555.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 215
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVDYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR +S + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 137 LVNEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLP 186
>gi|448114201|ref|XP_004202515.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359383383|emb|CCE79299.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 132/226 (58%), Gaps = 27/226 (11%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M+ SA+ KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSQASAVTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
++WDTAGQERF SL P Y R++ A+VVYD+ SF+ +W+ E++ + D+ I LV
Sbjct: 61 EIWDTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALV 120
Query: 121 GNKTDLVEK--------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
GNK DLVE R VSIEEG+ + E ++F ETSAK N+ +F I +P
Sbjct: 121 GNKYDLVESDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIP- 179
Query: 173 METLSSTK----------QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
ETL+ST+ + +D+ S+T NAS + S C+C
Sbjct: 180 -ETLTSTRPGTGATGSSGSDGRIDL---SSTPNASTNDS----CAC 217
>gi|431914002|gb|ELK15264.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 256
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 56 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 115
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 116 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 175
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 176 ADLANKRVVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 226
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 131/212 (61%), Gaps = 18/212 (8%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV +KR + + EA +RE ++F ETSAK N++ LF IA LP G L
Sbjct: 135 LVTENPDKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSG-CSC 208
+T + V+LR T S +Q +G C+C
Sbjct: 195 TTPRP---GVDLRPET-----SGTQGAGACNC 218
>gi|50550089|ref|XP_502517.1| YALI0D07128p [Yarrowia lipolytica]
gi|49648385|emb|CAG80705.1| YALI0D07128p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 123/207 (59%), Gaps = 17/207 (8%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ ++F + TIG FL++ DRT++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCNFPDRTIKFEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-- 128
F SL P Y R++ A+VVYD+ QSF+ W+ E++++ +II LVGNK DLV+
Sbjct: 71 FASLAPMYYRNAQTALVVYDITKPQSFIKARHWVSELKSQASPGIIIALVGNKRDLVDDD 130
Query: 129 --KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET-----LSSTKQ 181
R+V+ +EG+ + E ++F ETSAK G N+K +F IA +P + L ++
Sbjct: 131 ESARKVAEDEGKQLAEEEGLLFFETSAKTGLNVKDVFMAIAQKIPEEQKAPSGGLRGAEE 190
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ VD+N S S C+C
Sbjct: 191 DSRVDLN--------SAVAGPESSCAC 209
>gi|225448984|ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
gi|147864853|emb|CAN79376.1| hypothetical protein VITISV_009584 [Vitis vinifera]
gi|296085986|emb|CBI31427.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 112/171 (65%), Gaps = 1/171 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRL 60
AP + + KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+
Sbjct: 25 APDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 84
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
++WDTAGQER+ +L P Y R ++VAVVVYD+ S +SF W+ E++ D+++ LV
Sbjct: 85 EIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPESFNKAQYWVKELQKHGSPDIVMALV 144
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK DL E R+V +++G + + + FIETSAK NI LF +IA LP
Sbjct: 145 GNKADLHENREVPVQDGIDYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|428174756|gb|EKX43650.1| hypothetical protein GUITHDRAFT_159784 [Guillardia theta CCMP2712]
Length = 204
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 113/179 (63%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV LG+ +VGK+S++ RF+ +F + ++TIG FL++T+ L D TV+ ++WDTAGQE
Sbjct: 11 FKLVLLGEGAVGKSSLVLRFVRGQFFDYQESTIGAAFLTQTVALNDTTVKFEIWDTAGQE 70
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
R+ SL P Y R ++ A+VVYD+ S SF W+ E++ + +++I L GNK+DL K
Sbjct: 71 RYHSLAPMYYRGAAAAIVVYDITSTDSFARAKSWVRELQRQGNPNIVIALAGNKSDLASK 130
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
R+V +E + E N+MF+ETSAK N+ LF +IA LP + + VN
Sbjct: 131 RKVEPDEARQYAEENNIMFMETSAKTASNVNELFVQIARKLPKQQQQDKPSGSANIKVN 189
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|67469385|ref|XP_650671.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467319|gb|EAL45284.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790150|dbj|BAD82871.1| small GTPase EhRabX23 [Entamoeba histolytica]
gi|449705577|gb|EMD45593.1| small GTPase EhRabX23, putative [Entamoeba histolytica KU27]
Length = 186
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++K+VF+GD SVGKT II RF FD +Y ATIG DF+++ M ++++ + LQ+WDTA
Sbjct: 4 ICRHKVVFIGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSLIP+YIR +SV V+VYD++ +Q+F N W DEV + ++ +VGNK D
Sbjct: 64 GQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDREST--LVYIVGNKVD- 120
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
+R V+ EEG KS + + FIETSA I LF IA+ L
Sbjct: 121 -SQRGVTKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNL 163
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 2 APV-SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
APV + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+
Sbjct: 14 APVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKF 73
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
++WDTAGQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L
Sbjct: 74 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALA 133
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
GNK DL KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 134 GNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSE 187
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIVIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR +S + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 137 LVTEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKLP 186
>gi|407040921|gb|EKE40414.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 186
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++K+VF+GD SVGKT II RF FD +Y ATIG DF+++ M ++++ + LQ+WDTA
Sbjct: 4 ICRHKVVFIGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSLIP+YIR +SV V+VYD++ +Q+F N W DEV + ++ +VGNK D
Sbjct: 64 GQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDREST--LVYIVGNKVD- 120
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
+R V+ EEG KS + + FIETSA I LF IA+ L
Sbjct: 121 -SERGVTKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNL 163
>gi|297816780|ref|XP_002876273.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322111|gb|EFH52532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL
Sbjct: 93 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V E+G + + + FIETSAK NI LF +I LP
Sbjct: 153 EKREVPTEDGIGLAEKNGMFFIETSAKTADNINQLFEEIGKRLP 196
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 113/173 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 52 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 111
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 112 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 171
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ +F IA LP E ++T
Sbjct: 172 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 224
>gi|426348255|ref|XP_004041753.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Gorilla gorilla
gorilla]
Length = 249
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 113/173 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 52 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 111
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 112 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 171
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ +F IA LP E ++T
Sbjct: 172 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 224
>gi|440292390|gb|ELP85595.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 202
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 113/168 (67%), Gaps = 3/168 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+A++K+ +GD SVGKT II RF FD +Y ATIG DF+++ M ++ + + LQ+WDTA
Sbjct: 19 IARFKIAVVGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQLMEVDSKKIELQIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSLIP+YIR SSV ++VYDV RQSF N WI+EV E+ S ++ LV NK D
Sbjct: 79 GQERYRSLIPNYIRGSSVVLIVYDVNDRQSFNNVDSWINEV-PEKDS-TLVYLVANKID- 135
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
++R V+ EEG KS +L+ FIETSA I LF IA L ++
Sbjct: 136 SDQRNVTKEEGMKKSYQLSSRFIETSALKDIGIADLFEDIATNLAPLK 183
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E+R + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELRRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 113/173 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 52 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 111
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 112 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 171
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ +F IA LP E ++T
Sbjct: 172 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 224
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ +++ T++ ++WDTAGQ
Sbjct: 7 HFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTIGAAFLTQTVNVDNVTIKFEIWDTAGQ 66
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+RSL P Y R ++ A+VVYD+ SR+SF W+ E++ +V+I L GNK DL E
Sbjct: 67 ERYRSLAPMYYRGAAAAIVVYDITSRESFNGAKTWVKELQRRGDPNVVIALAGNKCDLEE 126
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
RQ+ EE E + E ++F+ETSAK N++ +F I LP +E D
Sbjct: 127 NRQIPREEAEEYAVENGLLFMETSAKMALNVREIFESIGHKLP-----KGAPVQEKTDAF 181
Query: 189 LRSTTGNASQSQSQSSGCSC 208
+ A QS+ C C
Sbjct: 182 VI-----APPQQSEKKKCDC 196
>gi|241959174|ref|XP_002422306.1| GTP-binding protein, putative; vacuolar protein sorting-associated
protein, putative; vacuolar protein-targeting protein,
putative [Candida dubliniensis CD36]
gi|223645651|emb|CAX40312.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 16/211 (7%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP +A+ KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ +
Sbjct: 6 APATAV---KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYE 62
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQERF SL P Y R++ AVVVYD+ SF+ W+ E+ + D+ I LVG
Sbjct: 63 IWDTAGQERFASLAPMYYRNAQAAVVVYDITKPASFIKARHWVKELHEQANRDITIALVG 122
Query: 122 NKTDLVEK---------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
NK DLVE R+VSIEEG+ + E ++F ETSAK G N+ +F I + +P
Sbjct: 123 NKLDLVEDDSAEDGETLRKVSIEEGQTLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPS 182
Query: 173 METLSSTKQE----EMVDVNLRSTTGNASQS 199
+ S QE +D+ + NA++S
Sbjct: 183 VTVAGSEAQESSNGRRIDLTANTDDSNATRS 213
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 114/157 (72%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K+V +GD +VGK++++TR+ ++F+ +ATIG++F +++M + + V+ Q+WDTAGQE
Sbjct: 14 FKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEVKAQVWDTAGQE 73
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ +Y R + A+VVYD+ +Q+F N SKW+DE+RT GS V+ +LVGNK DL
Sbjct: 74 RFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDLTNI 133
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
R+VS+EEG+ + N+ F+ETSA A N+K F+ +
Sbjct: 134 REVSVEEGKELAESENLFFMETSALASTNVKTAFQNV 170
>gi|167383306|ref|XP_001736482.1| rab6 [Entamoeba dispar SAW760]
gi|165901130|gb|EDR27285.1| rab6, putative [Entamoeba dispar SAW760]
Length = 186
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 113/164 (68%), Gaps = 4/164 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++K+VF+GD SVGKT II RF FD +Y ATIG DF+++ M ++++ + LQ+WDTA
Sbjct: 4 ICRHKVVFIGDCSVGKTCIIGRFTSKIFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSLIP+YIR +SV V+VYD++ +Q+F N W DEV +R S ++ +VGNK D
Sbjct: 64 GQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEV-PDRNS-TLVYIVGNKVD- 120
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
+R V+ EEG KS + + FIETSA I LF IA+ L
Sbjct: 121 -SERGVTKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNL 163
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 112/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ +R +F W+ E++ + +++I L GNK D+
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIALAGNKADV 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|18410144|ref|NP_567008.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75169988|sp|Q9CB01.1|RABF1_ARATH RecName: Full=Ras-related protein RABF1; Short=AtRABF1; AltName:
Full=Ras-related protein Ara-6; AltName:
Full=Ras-related protein Rab5C; Short=AtRab5C
gi|13160603|dbj|BAB32953.1| Ara6 [Arabidopsis thaliana]
gi|27754459|gb|AAO22677.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|28393957|gb|AAO42386.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|332645777|gb|AEE79298.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 202
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL
Sbjct: 93 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V E+G + + + FIETSAK NI LF +I LP
Sbjct: 153 EKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLP 196
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 113/173 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ +F IA LP E ++T
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 191
>gi|327275534|ref|XP_003222528.1| PREDICTED: ras-related protein Rab-5C-like [Anolis carolinensis]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 113/173 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F+ W+ E++ + S+++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNMDTFVRAKNWVKELQRQASSNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ F IA LP E +T
Sbjct: 139 GSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNETFMAIAKKLPKNEPQCAT 191
>gi|426348257|ref|XP_004041754.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Gorilla gorilla
gorilla]
Length = 286
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 113/173 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 89 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 148
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 149 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 208
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ +F IA LP E ++T
Sbjct: 209 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 261
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 119/202 (58%), Gaps = 16/202 (7%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+V LGD VGKTSI+ RF FD Q T+G F+ K + D+T + Q+WDTAGQE+
Sbjct: 8 KVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWDTAGQEK 67
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+RSL P Y RD+ A++VYD+ +R SF KW+ E+R +++ I +VGNK DL+++
Sbjct: 68 YRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQELREHGPANITIAVVGNKVDLIDRE 127
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN-- 188
V +E + + ELN +F TSAK NI+ LF +IA ++EE D+N
Sbjct: 128 DVKYDEAKQYANELNAIFQYTSAKENQNIESLFIQIA------------EKEEQKDINPT 175
Query: 189 -LRSTTGNASQSQ-SQSSGCSC 208
+S G +Q Q Q GC+C
Sbjct: 176 KPQSNKGFQNQVQRPQGGGCNC 197
>gi|357146391|ref|XP_003573975.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 200
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
K KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 31 KVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R + AVVVYD+ S +SF W+ E++ D+++ LVGNK DL
Sbjct: 91 QERYAALAPLYYRGAGAAVVVYDITSAESFSKAQYWVKELQKHGSQDMVMALVGNKADLH 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR VS ++ + + ++ F+ETSAK NI LF +IA LP
Sbjct: 151 EKRTVSSQDAQEYAERNSMFFVETSAKTADNINQLFEEIAKRLP 194
>gi|255630597|gb|ACU15658.1| unknown [Glycine max]
Length = 204
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLL 151
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
EKR+V++++G + + ++ FIETSAK NI LF +IA
Sbjct: 152 EKREVAVQDGTDYAEKNDMFFIETSAKTADNINELFEEIA 191
>gi|110590632|pdb|2HEI|A Chain A, Crystal Structure Of Human Rab5b In Complex With Gdp
gi|110590633|pdb|2HEI|B Chain B, Crystal Structure Of Human Rab5b In Complex With Gdp
Length = 179
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 112/170 (65%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++WD
Sbjct: 4 SKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWD 63
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 64 TAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKA 123
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 124 DLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 173
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 16/211 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV +KR + + EA +RE ++F ETSAK N+K LF IA LP G L
Sbjct: 135 LVTESPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVKELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+T + V+LR A +Q S C+C
Sbjct: 195 TTPRP---GVDLRP---EAPGTQGAGS-CNC 218
>gi|291237556|ref|XP_002738699.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 215
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 110/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYDV ++ +F W+ E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDVTNQDTFARAKTWVKELQRQASPNIVIALAGNKADL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V EE +A + + +++F+ETSAK N+ +F IA LP
Sbjct: 137 ANKRMVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKLP 181
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein, PIR
Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 113/173 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ +F IA LP E ++T
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 191
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTE 186
>gi|49168452|emb|CAG38721.1| RAB5B [Homo sapiens]
Length = 215
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 112/171 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + +++LV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFELVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL KR V EE +A + + +++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|387861356|gb|AFK08607.1| Rab GTPase [Litopenaeus vannamei]
Length = 210
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 113/172 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 16 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GNK DL
Sbjct: 76 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKADL 135
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
KR V EE + + E +++F+ETSAK N+ +F IA LP ++ +S
Sbjct: 136 ANKRMVEYEEAQTYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKSDSTAS 187
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLD 135
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR V + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 136 LVAEQPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKLP 185
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP S ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L++ TV+ +
Sbjct: 14 AP-SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ S++SF W+ E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITSQESFAKAKNWVKELQRQASPNIVIALSG 132
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
NK DL KR V EE +A + + ++F+ETSAK N+ +F IA LP
Sbjct: 133 NKADLANKRVVEYEEAQAYADDNALLFMETSAKTAMNVNDIFLAIAKKLP 182
>gi|402222754|gb|EJU02820.1| GTP-binding protein RAB5 [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 114/173 (65%), Gaps = 1/173 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ LED TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDGTTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R ++ A+ VYD+ S WI E++ + ++I L GNK+DL
Sbjct: 66 QERYKSLAPMYYRSAACAICVYDITQSASLEKAKSWIRELQRQADPSIVIALCGNKSDLA 125
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
+RQVS EE + + E +M+ ETSAK G + +F +IA LP + L + +
Sbjct: 126 ARRQVSQEEAQKFAEEEGLMWCETSAKTGEGVNEIFDRIAHKLPEVAPLQAQR 178
>gi|225713422|gb|ACO12557.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290462345|gb|ADD24220.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290561497|gb|ADD38149.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 110/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYDV ++ SF+ W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V EE + + E ++F+ETSAK N+ +F +IA LP
Sbjct: 139 NTKRLVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKLP 183
>gi|291406117|ref|XP_002719438.1| PREDICTED: RAB5C, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 112/172 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
KR V +E +A + + +++F+ETSAK N+ +F IA LP E S+
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQSA 190
>gi|323448788|gb|EGB04682.1| hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens]
Length = 195
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 111/165 (67%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++++ LE+ TV+ ++WDTA
Sbjct: 6 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTA 65
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A+VVYD+ +++SF W+ E++ +VII L GNK DL
Sbjct: 66 GQERYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL 125
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR+V EE + S E ++ +ETSAK ++K LF++IA LP
Sbjct: 126 QNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLP 170
>gi|254573032|ref|XP_002493625.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|238033424|emb|CAY71446.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|328354547|emb|CCA40944.1| Ras-like GTP-binding protein YPT1 [Komagataella pastoris CBS 7435]
Length = 218
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 22/224 (9%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M+ + KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + D+T++
Sbjct: 1 MSSNKQITAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCTIGDKTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
++WDTAGQERF+SL P Y R++ A+VVYDV +SF+ W++E+ + ++II L
Sbjct: 61 EIWDTAGQERFQSLAPMYYRNAQAALVVYDVTKPKSFIKARHWVNELHEQASKNIIIALC 120
Query: 121 GNKTDLVE----------------KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFR 164
GNK D+VE KR+VS++EG+ + + ++F ETSAK GFN+ +F
Sbjct: 121 GNKYDIVESEDNDVSTENEDDDSRKRKVSVQEGQTLADDEGLLFFETSAKTGFNVNEVFT 180
Query: 165 KIAAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
I +P + + +E VD+ N S S S C C
Sbjct: 181 TIGKHIPEATSSENAAGQERVDLT------NRLDSSSTESTCQC 218
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +FL W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFLRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQDAQAYAEDNSLLFMETSAKTAMNVNEVFMAIAKKLPKNE 186
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride IMI
206040]
Length = 220
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 137 LVNEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLP 186
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 137 LVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLP 186
>gi|367004961|ref|XP_003687213.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
gi|357525516|emb|CCE64779.1| hypothetical protein TPHA_0I02780 [Tetrapisispora phaffii CBS 4417]
Length = 208
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 119/171 (69%), Gaps = 7/171 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED--RTVRLQLWD 64
+ ++KLV LGD SVGK+SI+ RF+ D FD ++TIG FLS+T+ LE+ + ++ ++WD
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVYRFVKDSFDEFRESTIGAAFLSQTITLEENNQVIKFEIWD 60
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVGNK 123
TAGQER++SL P Y R+++ A+VVYDV + S + WI+E++ + G++ ++I LVGNK
Sbjct: 61 TAGQERYKSLAPMYYRNANAALVVYDVTAPDSLMKAKSWIEELKKKVGNEELVICLVGNK 120
Query: 124 TDLVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
D+ E KR++ EE + + + N++F E SAK G+N+K +F+KI L
Sbjct: 121 VDICEEDDTKRKIEFEEAKDWANDENLLFYEVSAKTGYNVKEVFQKIGEQL 171
>gi|348511330|ref|XP_003443197.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 120/184 (65%), Gaps = 3/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF+ W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME---TLSSTKQEE 183
KR + ++ ++ + + +++F+ETSAK N+ +F IA LP E T +ST +
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQATGASTGRNR 198
Query: 184 MVDV 187
VD+
Sbjct: 199 GVDL 202
>gi|20072723|gb|AAH27378.1| Rab5c protein, partial [Mus musculus]
Length = 203
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 6 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 65
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 66 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 125
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 126 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 173
>gi|383854195|ref|XP_003702607.1| PREDICTED: ras-related protein Rab-5C-like [Megachile rotundata]
Length = 214
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F+ W+ E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V EE + + E ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 111/173 (64%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++ + +D TV+ +
Sbjct: 15 APQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFE 74
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L G
Sbjct: 75 IWDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAG 134
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK+DL KR V EE +A + E ++F+ETSAK N+ +F IA LP E
Sbjct: 135 NKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSE 187
>gi|225717846|gb|ACO14769.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 220
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 108/163 (66%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTAGQ
Sbjct: 25 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQ 84
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R + A+VVYDV ++ SF W+ E++ + +++I L GNK DL
Sbjct: 85 ERYHSLAPMYYRGAQAAIVVYDVTNQDSFTRAKNWVKELQRQASPNIVIALAGNKNDLTT 144
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V EE + + E ++F+ETSAK N+ +F +IA LP
Sbjct: 145 KRLVMYEEAQTYAEENGLLFMETSAKTALNVNDIFMEIAKKLP 187
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 131/211 (62%), Gaps = 16/211 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ ++FD+ ++TIG FL++T+ L+D T V+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLDDSTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV +KR +S + EA +RE ++F ETSAK+ N+ LF IA LP G +
Sbjct: 135 LVTENPDKRAISTADAEAYAREAGLLFFETSAKSSTNVHELFTAIAKKLPLDQAGPRNMR 194
Query: 178 STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+T + V+LR A +Q S C+C
Sbjct: 195 TTPRP---GVDLRP---EAPGTQGAGS-CNC 218
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L++ TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F+ + W+ E++ + ++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFMRATTWVKELQRQASPSIVIALAGNKADL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V EE +A + E ++F+ETSAK N+ +F IA LP E
Sbjct: 137 GNKRVVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 184
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 109/163 (66%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTAGQ
Sbjct: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R + A+VVYD+ +++SF W+ E++ + +++I L GNK DL
Sbjct: 80 ERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADLAN 139
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V EE +A + + ++F+ETSAK N+ +F IA LP
Sbjct: 140 KRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLP 182
>gi|340378375|ref|XP_003387703.1| PREDICTED: ras-related protein Rab-5C-like [Amphimedon
queenslandica]
Length = 221
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 111/169 (65%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++
Sbjct: 15 PREKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEI 74
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKNWVKELQRQASPNIVIALAGN 134
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
K DL KR V ++ +A + E +++F+ETSAK N+ +F IA LP
Sbjct: 135 KADLASKRMVEYDDAQAYAEENSLLFMETSAKTAMNVNEIFLAIAKKLP 183
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR V + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 135 LVADNPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIARKLP 184
>gi|50979062|ref|NP_001003261.1| ras-related protein Rab-5C [Canis lupus familiaris]
gi|1710027|sp|P51147.1|RAB5C_CANFA RecName: Full=Ras-related protein Rab-5C
gi|415377|emb|CAA81626.1| Rab5c protein [Canis lupus familiaris]
Length = 216
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 110/169 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 298 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 357
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 358 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 417
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 418 ASKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEP 466
>gi|301773541|ref|XP_002922175.1| PREDICTED: ras-related protein Rab-5C-like [Ailuropoda melanoleuca]
gi|281344533|gb|EFB20117.1| hypothetical protein PANDA_011151 [Ailuropoda melanoleuca]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|403304464|ref|XP_003942816.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Saimiri
boliviensis boliviensis]
gi|403304466|ref|XP_003942817.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Saimiri
boliviensis boliviensis]
gi|403304468|ref|XP_003942818.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + ++F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 SSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLD 135
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 136 LVTEQPDKRAIETADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKLP 185
>gi|149723790|ref|XP_001495006.1| PREDICTED: ras-related protein Rab-5C-like [Equus caballus]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 STKRAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTE 186
>gi|113866024|ref|NP_077776.2| ras-related protein Rab-5C [Mus musculus]
gi|38258917|sp|P35278.2|RAB5C_MOUSE RecName: Full=Ras-related protein Rab-5C
gi|18606182|gb|AAH23027.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|20988213|gb|AAH29678.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|74186351|dbj|BAE42948.1| unnamed protein product [Mus musculus]
gi|74195703|dbj|BAE39656.1| unnamed protein product [Mus musculus]
gi|74204684|dbj|BAE35411.1| unnamed protein product [Mus musculus]
gi|112292959|dbj|BAF02857.1| Rab5C [Mus musculus]
gi|148670588|gb|EDL02535.1| RAB5C, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|156095051|ref|XP_001613561.1| small GTPase Rab5c [Plasmodium vivax Sal-1]
gi|148802435|gb|EDL43834.1| small GTPase Rab5c, putative [Plasmodium vivax]
Length = 214
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 117/182 (64%), Gaps = 4/182 (2%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+RSL P Y R +S AV+VYD+ +++SF WI E+++ +D+II L GNK DL + R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKKDLEKNR 148
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLR 190
V E E+ + N++FIETSAK G N+ LF +IA LP L +Q++ + +
Sbjct: 149 VVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP----LHKKEQDKFSGIQIN 204
Query: 191 ST 192
+T
Sbjct: 205 NT 206
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTAGQ
Sbjct: 19 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 78
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R + A+VVYD+ +++SF W+ E++ + ++++ L GNK D+
Sbjct: 79 ERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVAN 138
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KR V EE A + + ++F+ETSAK N+ +F IA LP + + E V+
Sbjct: 139 KRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP----IGPAQGEPTGTVD 194
Query: 189 LRSTTGNASQSQSQSSGCSC 208
+ +Q Q Q G C
Sbjct: 195 M-------NQPQQQQKGSCC 207
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AASSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I + G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIAIAG 133
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 125/208 (60%), Gaps = 10/208 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDEATTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKLD 135
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV +KR + + EA ++E ++F ETSAK N++ LF IA LP + +
Sbjct: 136 LVTEQQDKRVIQTADAEAYAKEAGLLFFETSAKTSENVRELFTAIAKKLPLDQAGPRNPR 195
Query: 181 QEEMVDVNLRSTTGNASQSQSQSSGCSC 208
V+LR N +GCSC
Sbjct: 196 SGPRPGVDLRPEAANT----QGGAGCSC 219
>gi|347800697|ref|NP_001099310.2| ras-related protein Rab-5C [Rattus norvegicus]
gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norvegicus]
gi|165970759|gb|AAI58857.1| Rab5c protein [Rattus norvegicus]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|344285066|ref|XP_003414284.1| PREDICTED: ras-related protein Rab-5C-like [Loxodonta africana]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E +A + + +++F+ETSAK N+ +F IA LP E + T
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNVT 191
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA +RE ++F ETSAK N+ LF IA LP
Sbjct: 137 LVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVANLFTAIAKKLP 186
>gi|189237939|ref|XP_001813105.1| PREDICTED: similar to small GTP binding protein RAB5 [Tribolium
castaneum]
gi|270008253|gb|EFA04701.1| Rab-protein 5 [Tribolium castaneum]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKQDL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V EE + + E ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRMVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 186
>gi|395826386|ref|XP_003786399.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Otolemur
garnettii]
gi|395826388|ref|XP_003786400.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Otolemur
garnettii]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 120/201 (59%), Gaps = 11/201 (5%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTAG
Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAG 78
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ +++SF W+ E++ + ++++ L GNK D+
Sbjct: 79 QERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVA 138
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
KR V EE A + + ++F+ETSAK N+ +F IA LP + + E V
Sbjct: 139 NKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP----IGPAQGEPTGTV 194
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
++ +Q Q Q G C
Sbjct: 195 DM-------NQPQQQQKGSCC 208
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ASKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNE 185
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|68479347|ref|XP_716205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68479514|ref|XP_716121.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483715|ref|XP_714216.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483800|ref|XP_714175.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435716|gb|EAK95092.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435764|gb|EAK95139.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437777|gb|EAK97117.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437866|gb|EAK97205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238880208|gb|EEQ43846.1| vacuolar protein sorting-associated protein 21 [Candida albicans
WO-1]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 123/211 (58%), Gaps = 16/211 (7%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP +A+ KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ +
Sbjct: 6 APATAV---KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYE 62
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQERF SL P Y R++ A+VVYD+ SF+ W+ E+ + D+ I LVG
Sbjct: 63 IWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVG 122
Query: 122 NKTDLVEK---------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
NK DLVE R+VS+EEG++ + E ++F ETSAK G N+ +F I + +P
Sbjct: 123 NKLDLVEDDSAEDGETLRKVSVEEGQSLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPS 182
Query: 173 METLSSTKQE----EMVDVNLRSTTGNASQS 199
+ QE +D+ + NA +S
Sbjct: 183 VTVTGGEAQEGSNGRRIDLTANTDNANAPRS 213
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 116/170 (68%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+D T V+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIGAAFLTQTISLDDNTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S +W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR ++ + EA ++E ++F ETSAK N++ LF IA LP
Sbjct: 137 LVTAQPDKRAITTADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKLP 186
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTAGQ
Sbjct: 18 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 77
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R + A+VVYD+ +++SF W+ E++ + ++++ L GNK D+
Sbjct: 78 ERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVAN 137
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
KR V EE A + + ++F+ETSAK N+ +F IA LP + + E V+
Sbjct: 138 KRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP----IGPAQGEPTGTVD 193
Query: 189 LRSTTGNASQSQSQSSGCSC 208
+ +Q Q Q G C
Sbjct: 194 M-------NQPQQQQKGSCC 206
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 115/182 (63%), Gaps = 1/182 (0%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K++ +GD VGK+ ++ RF D + ++Y +TIG+DF KT+ +ED+ ++LQ+WDTAGQE
Sbjct: 9 FKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + ++VYDV R SF N WI E+ DV VL+GNK DL
Sbjct: 69 RFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKVLIGNKIDLKND 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
R VS EEG+ + N+ F+ETSAK N++ F+ +A + L + +Q+ V++NL
Sbjct: 129 RNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLEN-QQKGRVNINL 187
Query: 190 RS 191
+
Sbjct: 188 NA 189
>gi|403217405|emb|CCK71899.1| hypothetical protein KNAG_0I01080 [Kazachstania naganishii CBS
8797]
Length = 253
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 115/173 (66%), Gaps = 7/173 (4%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
PV+++ KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + T++ ++
Sbjct: 4 PVTSI---KLVLLGEVAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNINEHTIKFEI 60
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQERF SL P Y R++ A+VVYDV QSF+ W+ E+ + D+II LVGN
Sbjct: 61 WDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGN 120
Query: 123 KTDLVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
K D+++ +R+V+ EEGE ++E N++F ETSAK G N+ +F KI +P
Sbjct: 121 KIDMLDEDPTERKVAREEGEKLAQEENLLFFETSAKTGANVNEVFLKIGENVP 173
>gi|224113085|ref|XP_002316386.1| predicted protein [Populus trichocarpa]
gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222865426|gb|EEF02557.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + TIG FLS+T+ L+D T ++ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTIKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S ++F W+ E++ D+++ LVGNK DL
Sbjct: 93 QERYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V ++G + + + FIETSAK NI LF +IA LP
Sbjct: 153 EKREVPTQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 196
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|156083945|ref|XP_001609456.1| Ras-related protein Rab-5 [Babesia bovis T2Bo]
gi|154796707|gb|EDO05888.1| Ras-related protein Rab-5 [Babesia bovis]
Length = 222
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 112/166 (67%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+ ++KLV LGD SVGK+S++ RF+ + F ++TIG F+++++ L+D TV+ ++WDT
Sbjct: 29 SFYQFKLVILGDTSVGKSSLVGRFVKNTFLEFQESTIGAAFMTQSVSLDDCTVKFEIWDT 88
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER+R+L P Y R SS AV+VYD+ R+SF WI E++ G +V++ L GNK D
Sbjct: 89 AGQERYRTLAPMYYRGSSAAVIVYDITMRESFQQAKGWIQELQAHVGPNVVLALAGNKVD 148
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
L R+VS E E + N +F+ETSAK G ++ LF +IA A+P
Sbjct: 149 LDSSREVSREVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIP 194
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 222
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 121/206 (58%), Gaps = 2/206 (0%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 16 AAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFE 75
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L G
Sbjct: 76 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFDRAKNWVKELQRQASPNIVIALAG 135
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK D+ KR V +E +A + + +++F+ETSAK N+ +F IA LP E + Q
Sbjct: 136 NKADIANKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGTAGQ 195
Query: 182 --EEMVDVNLRSTTGNASQSQSQSSG 205
V+L T S S G
Sbjct: 196 GGRTRTGVDLEQTNPQGSSSSRCCGG 221
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTIKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNE 185
>gi|154421140|ref|XP_001583584.1| Ras family protein [Trichomonas vaginalis G3]
gi|72536124|gb|AAZ73170.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121917826|gb|EAY22598.1| Ras family protein [Trichomonas vaginalis G3]
Length = 218
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A+ ++K+VF+G+ +VGKTSII ++MYD +Q T+GIDF +KT+ E +++R+Q+WDT
Sbjct: 2 AMIQHKVVFVGNSAVGKTSIINQYMYDSVSADHQPTVGIDFFAKTVNYEGKSIRMQIWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQE+F SLIPSYIRDS+VA+ V+D+ SR SF + KW V +II VGNK D
Sbjct: 62 AGQEKFHSLIPSYIRDSTVAIFVFDITSRSSFEDLEKWFKMVLDIANPRLII--VGNKCD 119
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L +R+V+ ++ E + + +IETSA A NI LF IA+ E+ + +
Sbjct: 120 LDAEREVTKDDAEKYAIIKSADYIETSAIAPTNITELFNLIASTPSESESTPQNTNQLAL 179
Query: 186 DVNLR 190
D R
Sbjct: 180 DTTPR 184
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|164661221|ref|XP_001731733.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
gi|159105634|gb|EDP44519.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
Length = 220
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 132/220 (60%), Gaps = 15/220 (6%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQL 62
+S++A +KLV LG+ SVGK+S+ RF+ D+F++ ++TIG FL++T+ +D T++L++
Sbjct: 1 MSSVASFKLVLLGESSVGKSSVALRFVKDQFEDYRESTIGAAFLTQTVRRQDGATIKLEI 60
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER++SL P Y R++ A+VVYD+ ++SF N WI E++ +++ I LVGN
Sbjct: 61 WDTAGQERYKSLAPMYYRNAHCALVVYDITEQESFENAKSWIRELQRHADANITIALVGN 120
Query: 123 KTDLVE-KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP---GM----- 173
K DL E R VS E+G+ + +MF+ETSAK N+ LF +A LP GM
Sbjct: 121 KLDLAETSRTVSAEDGQKYADSEGLMFMETSAKTPTNVTELFTLVANKLPLDRGMGVKRG 180
Query: 174 ETLSSTKQEEMVDVNLRSTT-----GNASQSQSQSSGCSC 208
E+ + + R G +SQ + CSC
Sbjct: 181 ESAAGGGSGGAAGASARPANGPVKLGTSSQPSTNQDACSC 220
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 117/188 (62%), Gaps = 11/188 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + ++F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 SSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ---------- 188
Query: 187 VNLRSTTG 194
N +STTG
Sbjct: 189 -NAQSTTG 195
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 137 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 184
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 21 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 80
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 81 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 140
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 141 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSE 188
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF +F ++TIG FL++T+ ++D TV+ ++WDTAGQ
Sbjct: 35 QFKLVLLGESAVGKSSLVLRFAKGQFHEFQESTIGAAFLTQTVCMDDMTVKFEIWDTAGQ 94
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER++SL P Y R + A+VVYD+ +++SF W++E++ + +++I L GNK DL
Sbjct: 95 ERYQSLAPMYYRAARAAIVVYDITNQKSFTKAKNWVNELQRQALPNIVIALAGNKADLAS 154
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS---STKQEEMV 185
R+V E +A + E ++F+ETSAK N+ +F IA LP E S S +++V
Sbjct: 155 SRKVEFNEAQAYAEENGLLFMETSAKTAMNVNDIFWAIAKELPKTEAASGGLSGAGKQVV 214
Query: 186 DV 187
D+
Sbjct: 215 DL 216
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 110/161 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++V+D+ ++ SF KW+ E++ + ++++ L GNK DL++ R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+VS EE E ++E ++ F+ETSAK N+K +F +IA LP
Sbjct: 132 KVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLP 172
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 136
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 137 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 184
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 113/168 (67%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
++++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ +++SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR + ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEMFMAIAKKLPKNE 186
>gi|225711468|gb|ACO11580.1| Ras-related protein Rab-18 [Caligus rogercresseyi]
Length = 211
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 2/209 (0%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M + L KL+ +G+ VGK+S++ RF D FD + ATIG+DF KT+ ++ V+L
Sbjct: 1 MMEDAILTSLKLLIIGESGVGKSSLLLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRT-ERGSDVIIVL 119
+WDTAGQERFR+L PSY R A++VYDV SR+SF N W++E+ T D++ +L
Sbjct: 61 AIWDTAGQERFRTLTPSYYRGGQGAILVYDVTSRESFSNVENWLNELDTYTTNHDIVKML 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNK DL +KR VS EEG+ +R+ +MFIE SAK ++ F ++ + L
Sbjct: 121 VGNKCDLEDKRVVSKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEA 180
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
+N++S NAS +G C
Sbjct: 181 AN-SAGGINVKSDNNNASGDSQSCAGYYC 208
>gi|156387431|ref|XP_001634207.1| predicted protein [Nematostella vectensis]
gi|156221287|gb|EDO42144.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 111/161 (68%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+S++ RF D F NTY +TIG+DF +T+ ++ +T++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR+L +Y R + V++YDV ++FL+ S+W++EV V +LVGNK DL++
Sbjct: 69 RFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDC 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
RQV + + +L++ FIETSAK N++ +FR +AA L
Sbjct: 129 RQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAEL 169
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ LED TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLEDGSTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVVVYD+ S WI E++ + ++I L GNK DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSASLEKAKTWIRELQRQADPSIVIALCGNKVDLE 125
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
E+RQV EE + ++E +M+ ETSAK G + +F ++A LP
Sbjct: 126 ERRQVLQEEAQNYAKEEGLMWGETSAKTGLGVNDIFTELAKKLP 169
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNE 185
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR-TVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+D+ TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQSTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVVVYD+ S WI E++ + ++I L GNK DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNKLDLA 125
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQVS EE + + E +M+ ETSAK G ++ +F IA LP
Sbjct: 126 ARRQVSQEEAQKYAEEEGLMWAETSAKTGEGVQEIFTAIAKKLP 169
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSE 186
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDHQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSE 186
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 GSKRAVDFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 132/206 (64%), Gaps = 11/206 (5%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE---DRTVRLQ 61
+ + ++KLV LGD SVGK+SI+ RF+ D FD ++TIG FLS+T+ LE D T++ +
Sbjct: 21 ATMLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKLEKHPDVTIKFE 80
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERG-SDVIIVLV 120
+WDTAGQER++SL P Y R+++ A++VYDV S + W++E++ + G D++I L
Sbjct: 81 IWDTAGQERYKSLAPMYYRNANAALIVYDVTQPGSLVKAQSWVEELKNKVGDQDLVICLA 140
Query: 121 GNKTDLVEK----RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL---PGM 173
GNK D+ ++ R+V E+ + ++E ++F ETSAK G + +F++I + GM
Sbjct: 141 GNKVDICDEDATAREVQREDAQLYAQEQGLLFYETSAKTGAGVSAIFQEIGERVYQKKGM 200
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQS 199
E SST+ + ++V L+ + N S S
Sbjct: 201 EVPSSTQARKPLNVELQRPSTNDSTS 226
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 131/213 (61%), Gaps = 20/213 (9%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 135
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV +KR + + EA ++E ++F ETSAK N++ LF IA LP G L
Sbjct: 136 LVNEHPDKRAIQTADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKLPLDQAGPRNLR 195
Query: 178 STKQEEMVDVNLRS-TTGNASQSQSQSSG-CSC 208
S + V+LR +TG +Q +G C C
Sbjct: 196 SNPRP---GVDLRPESTG------TQGAGNCQC 219
>gi|221052324|ref|XP_002257738.1| Rab5c GTPase [Plasmodium knowlesi strain H]
gi|193807569|emb|CAQ38074.1| Rab5c GTPase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 108/161 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+RSL P Y R +S AV+VYD+ +++SF WI E+++ +D+II L GNK DL + R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKKDLEKNR 148
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
V E E+ + N++FIETSAK G N+ LF +IA LP
Sbjct: 149 VVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP 189
>gi|66801327|ref|XP_629589.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996490|sp|Q54DA7.1|RAB4_DICDI RecName: Full=Ras-related protein Rab-4
gi|60462986|gb|EAL61182.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 205
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 127/199 (63%), Gaps = 3/199 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K + +G QSVGK+ ++ RF+ +KF + TIG+DF S+ + ++ + V+LQ+WDTAGQER
Sbjct: 9 KFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
FRS++ SY R S+ +VYDV +R+S+ + + W+ +V++ DV I+LVGNK DL E+R
Sbjct: 69 FRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQR 128
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE-EMVDVNL 189
+V+ E ++E ++F+ETSA G ++ +F K + M + S + E + V +
Sbjct: 129 EVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTI--MTKIDSGEVNLEHLGVQI 186
Query: 190 RSTTGNASQSQSQSSGCSC 208
S +GN ++ SS CSC
Sbjct: 187 SSDSGNVTKKPGDSSNCSC 205
>gi|226531049|ref|NP_001149278.1| LOC100282900 [Zea mays]
gi|195625976|gb|ACG34818.1| ras-related protein RHN1 [Zea mays]
gi|223949965|gb|ACN29066.1| unknown [Zea mays]
gi|413957021|gb|AFW89670.1| Ras protein RHN1 [Zea mays]
Length = 200
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 32 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ A+VVYD+ S +SF W+ E++ +++VLVGNK DL
Sbjct: 92 QERYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVGNKADLH 151
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R VS ++ + + + N+ FIETSAK NI LF +IA LP
Sbjct: 152 DNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|242036893|ref|XP_002465841.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
gi|241919695|gb|EER92839.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
Length = 200
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 32 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ A+VVYD+ S +SF W+ E++ +++VLVGNK DL
Sbjct: 92 QERYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVGNKADLH 151
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R VS ++ + + + N+ FIETSAK NI LF +IA LP
Sbjct: 152 DNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|432910626|ref|XP_004078445.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 114/172 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF+ W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
KR + ++ ++ + + +++F+ETSAK N+ +F IA LP E ++
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPAAA 190
>gi|448111644|ref|XP_004201890.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359464879|emb|CCE88584.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 129/224 (57%), Gaps = 23/224 (10%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M+ SA+ KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSQASAVTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
++WDTAGQERF SL P Y R++ A+VVYD+ SF+ +W+ E++ + D+ I LV
Sbjct: 61 EIWDTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALV 120
Query: 121 GNKTDLVEK--------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF----RKIAA 168
GNK DLVE R VSIEEG+ + E ++F ETSAK N+ +F +KI
Sbjct: 121 GNKYDLVESDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPE 180
Query: 169 AL----PGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L PG S+ + +D+ S+T N S + S C+C
Sbjct: 181 NLTSNRPGTGATGSSGSDGRIDL---SSTPNPSTNDS----CAC 217
>gi|297262644|ref|XP_001096821.2| PREDICTED: ras-related protein Rab-5B-like [Macaca mulatta]
Length = 207
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 110/169 (65%)
Query: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG 172
DL KR V EE +A + + +++F+ETSAK N+ LF I L G
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKNLGG 183
>gi|118381174|ref|XP_001023748.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|5738170|gb|AAD50282.1|AF169952_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89305515|gb|EAS03503.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777888|dbj|BAJ21340.1| Rab-family small GTPase Rab2G [Tetrahymena thermophila]
Length = 207
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 106/156 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K + +GD SVGK++I+ +FM KF + TIG++F SK + ++ + V+LQ+WDTAGQE
Sbjct: 7 FKYIIIGDSSVGKSAILLQFMEGKFKAEHDTTIGVEFGSKIIQVKGKNVKLQVWDTAGQE 66
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
F+S+ SY R S A +VYDV +R+SF N KW++E + + +VLVGNK DL K
Sbjct: 67 SFKSITRSYYRGSICAFLVYDVTNRESFTNIQKWLEETQNYANDKITLVLVGNKIDLANK 126
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRK 165
RQVS +EG +++ + F+ETSAK G NI +FRK
Sbjct: 127 RQVSYDEGHEFAQKQEIQFVETSAKMGQNIDQVFRK 162
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKLPKNE 185
>gi|410895511|ref|XP_003961243.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 221
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 2/201 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 20 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 79
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK D+
Sbjct: 80 GQERYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADI 139
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV- 185
KR V +E + + E +++F+ETSAK N+ +F IA LP E Q V
Sbjct: 140 ANKRAVEHQEAQTYADENSLLFMETSAKTAINVNEIFMAIAKKLPKSEPQGGPGQGGRVR 199
Query: 186 -DVNLRSTTGNASQSQSQSSG 205
V+L+ SQ S G
Sbjct: 200 TGVDLQEAAPQGRSSQCCSGG 220
>gi|432883290|ref|XP_004074250.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVEFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSE 186
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQVSSLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA +RE ++F ETSAK+ N++ LF IA LP
Sbjct: 135 LVMDSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKLP 184
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 112/173 (64%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VV+D+ + +F W+ E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLTNKRNVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|391334640|ref|XP_003741710.1| PREDICTED: ras-related protein Rab-5C-like [Metaseiulus
occidentalis]
Length = 210
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 124/207 (59%), Gaps = 10/207 (4%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 13 ATAGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDLTNPDTFSRAKTWVKELQRQASPNIVIALAG 132
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR V E +A + E ++F+ETSAK N+ +F IA LP + ++ +Q
Sbjct: 133 NKADLASKRAVETAEAQAYADENQLLFMETSAKTATNVNDIFLAIAKKLPKND--AANQQ 190
Query: 182 EEMVDVNLRSTTGNASQSQSQSSGCSC 208
+ ++V A ++S SG C
Sbjct: 191 GQRLNV--------AQSAESNQSGGCC 209
>gi|298705900|emb|CBJ29030.1| Rab5, RAB family GTPase [Ectocarpus siliculosus]
Length = 195
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++ + L+D TV+ ++WDTA
Sbjct: 6 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTA 65
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A+VVYDV +++SF W+ E++ +VII L GNK DL
Sbjct: 66 GQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL 125
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQV EE + + ++ +ETSAK+ N+K +F +IA LP
Sbjct: 126 EHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLP 170
>gi|410904529|ref|XP_003965744.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 112/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF+ W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR + ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 186
>gi|224097801|ref|XP_002311076.1| predicted protein [Populus trichocarpa]
gi|222850896|gb|EEE88443.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + TIG FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S ++F W+ E++ D+++ LVGNK DL
Sbjct: 93 QERYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKADLQ 152
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V ++G + + + F+ETSAK NI LF +IA LP
Sbjct: 153 EKREVPTQDGIDYAEKNGMFFMETSAKTADNINQLFEEIAKRLP 196
>gi|380019933|ref|XP_003693855.1| PREDICTED: ras-related protein Rab-5C-like [Apis florea]
Length = 214
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F+ W+ E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E + + E ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRIVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|357114010|ref|XP_003558794.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 199
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 31 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ A+VVYD+ S +SF W+ E++ +I+VLVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAAAIVVYDITSPESFKKAQYWVKELQKHGNPGIIMVLVGNKADLH 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
E R V +E + + + ++ F+ETSAK NI LF +IA LP
Sbjct: 151 ESRSVPTQEAQEYAEKNSMFFMETSAKTADNINQLFEEIAKRLP 194
>gi|351721304|ref|NP_001236437.1| uncharacterized protein LOC100305769 [Glycine max]
gi|255626561|gb|ACU13625.1| unknown [Glycine max]
Length = 203
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 109/159 (68%), Gaps = 1/159 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLL 151
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
EKR+V++++G + + + FIETSAK NI LF ++
Sbjct: 152 EKREVAVQDGTDYAEKNGMFFIETSAKTADNINELFEEL 190
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 51 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 110
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 111 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 170
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E +A + + +++F+ETSAK N+ +F IA LP
Sbjct: 171 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLP 215
>gi|389751301|gb|EIM92374.1| GTP-binding protein RAB5 [Stereum hirsutum FP-91666 SS1]
Length = 208
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+D TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVNLDDGMTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVVVYD+ S WI E++ + ++I L GNK+DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNKSDLA 125
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQV+ EE + + E +M+ ETSAK+G + +F IA LP
Sbjct: 126 ARRQVTQEEAQKYAEEEGLMWAETSAKSGEGVSDIFTAIAKKLP 169
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 135 LVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLP 184
>gi|55670031|pdb|1TU3|A Chain A, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670032|pdb|1TU3|B Chain B, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670033|pdb|1TU3|C Chain C, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670034|pdb|1TU3|D Chain D, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670035|pdb|1TU3|E Chain E, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
Length = 171
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 110/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 5 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 64
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 65 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 124
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 125 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 169
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA +RE ++F ETSAK N++ LF IA LP
Sbjct: 135 LVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLP 184
>gi|351700360|gb|EHB03279.1| Ras-related protein Rab-6A [Heterocephalus glaber]
Length = 151
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 100/137 (72%), Gaps = 6/137 (4%)
Query: 73 SLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQV 132
+LIPSYIRDS+ AVV DV + F T+KWID VRTERGSDVII+L+GNKTDL +KRQV
Sbjct: 20 ALIPSYIRDSAAAVVFCDVTNVNLFQQTTKWID-VRTERGSDVIIMLLGNKTDLADKRQV 78
Query: 133 SIEEGEAKSRELNVMFIETSAKAGFNIKPLF-RKIAAALPGMETLSSTKQEEMVDVNLRS 191
SIEEGE K++ELNVMF ETSAKAG ++K LF R++AAALPGME+ + +M+D+ L
Sbjct: 79 SIEEGERKAKELNVMFTETSAKAGDSVKQLFRRRVAAALPGMESAQDRSRADMIDIKLE- 137
Query: 192 TTGNASQSQSQSSGCSC 208
+ GCSC
Sbjct: 138 ---KPQEQPVTEGGCSC 151
>gi|294654743|ref|XP_456809.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
gi|199429115|emb|CAG84784.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
Length = 221
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 127/213 (59%), Gaps = 17/213 (7%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + DRT++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK- 129
F+SL P Y R++ A+VVYD+ SF+ W+ E+ + D+ I LVGNK DL E
Sbjct: 71 FQSLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKYDLAEND 130
Query: 130 -------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
R+VSIEEG+ + E ++F ETSAK+ +N+ +F I + +P +T +++
Sbjct: 131 NENEESLRKVSIEEGKNLAEEEGLLFFETSAKSSYNVNDVFVGIGSKIP--DTSANSGTA 188
Query: 183 EMVDVNLRST-------TGNASQSQSQSSGCSC 208
++VN +S + ++ ++ + C+C
Sbjct: 189 SGLNVNGQSNNEGRIDLSAGSNNNRGGADACAC 221
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 110/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 4 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ ++WDTA
Sbjct: 23 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFEIWDTA 82
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ SF W+ E++ + +++I L GNK DL
Sbjct: 83 GQERYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAGNKADL 142
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
R V EE + + + ++F+ETSAK N+ +F IA LP E +
Sbjct: 143 ANSRVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIAKKLPKNEGTGPQQ------ 196
Query: 187 VNLRSTTGNASQSQSQSSGC 206
N+R T S+ Q+SGC
Sbjct: 197 -NIRPTQNEQSR---QNSGC 212
>gi|145491373|ref|XP_001431686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398791|emb|CAK64288.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 112/161 (69%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K + +GD SVGK+ ++ +F+ KF + TIG++F SKT+ + + ++LQ+WDTAGQE
Sbjct: 8 FKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQIWDTAGQE 67
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
F+S+ SY R S A++VYDV SR SF N S+W++E ++ + +VLV NKTDL +K
Sbjct: 68 SFKSITRSYYRGSICALIVYDVTSRDSFENISRWMEETKSYANDKITLVLVANKTDLSDK 127
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
R +S EEG+ +++ +++F+E SAK GF + +F++ A A+
Sbjct: 128 RVISAEEGQTFAKKHDLIFVEASAKTGFQVDKIFQEAAEAV 168
>gi|237831479|ref|XP_002365037.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962701|gb|EEA97896.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487113|gb|EEE25359.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
gi|221506799|gb|EEE32416.1| rab12, putative [Toxoplasma gondii VEG]
Length = 238
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 127/211 (60%), Gaps = 7/211 (3%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P+ L +KLV +GD VGK+ ++ RF D F +Y TIG+DF +T+ +++ V+LQ+
Sbjct: 30 PLDHL--FKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQI 87
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQERFR++ +Y R + V+VYDV R+SFL+ +W+ EV + +LVGN
Sbjct: 88 WDTAGQERFRTITSAYYRGADGIVLVYDVTDRESFLHVDEWLAEVNRYANENTCKILVGN 147
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM-ETLSSTKQ 181
K + + RQVS+EEG+ K+ EL + FIETSAK N+ F +A L M ++ +
Sbjct: 148 KCEKADDRQVSVEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELIKMKQSAGAAAG 207
Query: 182 EEMVDVNLR---STTGNASQSQSQSSG-CSC 208
+ +R TG +++ +Q +G CSC
Sbjct: 208 RGVGPQGMRIASQPTGADNRAMAQRTGNCSC 238
>gi|317419436|emb|CBN81473.1| Ras-related protein Rab-5C [Dicentrarchus labrax]
Length = 221
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 125/208 (60%), Gaps = 9/208 (4%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 15 AVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFE 74
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L G
Sbjct: 75 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 134
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK D+ KR V ++E + + + +++F+ETSAK N+ +F IA LP + + Q
Sbjct: 135 NKADIANKRAVELQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDPQAGAGQ 194
Query: 182 EEMVDVNLRSTTG---NASQSQSQSSGC 206
R+ TG + QS+SS C
Sbjct: 195 ------GGRTRTGVDLQEAAPQSRSSQC 216
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 136
Query: 126 LVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV+ KR + + +A ++E ++F ETSAK N++ LF +IA LP
Sbjct: 137 LVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLP 186
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 215
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F I LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKKLPKNE 185
>gi|50305705|ref|XP_452813.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641946|emb|CAH01664.1| KLLA0C13728p [Kluyveromyces lactis]
Length = 208
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 14/211 (6%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + D T++ ++WD
Sbjct: 3 SNVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMADHTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SL P Y R++ A+VVYDV QSF+ W+ E+ + ++I LVGNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKGIVIALVGNKM 122
Query: 125 DLVEK---RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST-- 179
DL+E R+V+ EE E S+E N++F ETSAK G N+ +F I +P ++ S
Sbjct: 123 DLLESEEDRKVAKEEAEKLSQEENLLFFETSAKTGDNVNEVFLAIGEKIPLKKSDGSNTD 182
Query: 180 ----KQEEMVDVNLRSTTGNASQSQSQSSGC 206
++ +D+N T N + S GC
Sbjct: 183 GLRGTEDGRIDLNKPDDTSNPN-----SCGC 208
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 5/199 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F +T+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RF ++ SY R + ++VYD+ + +SF N KW+ + DV +++GNK D+ +K
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMILGNKCDMTDK 129
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
R VSIE GE+ +RE ++ F+ETSAKA NI+ FR++A A+ L T +E D
Sbjct: 130 RVVSIERGESIAREHDIRFMETSAKANINIERAFRELAEAI-----LDKTSGKETTDNPD 184
Query: 190 RSTTGNASQSQSQSSGCSC 208
R + + + C
Sbjct: 185 RVVVNRGTGDKPPAYKACC 203
>gi|325180967|emb|CCA15376.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 196
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTA 66
+KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ L D V+ ++WDTA
Sbjct: 7 CHFKLVLLGDTAVGKSCLVVRFVRDEFYEFQEPTIGAAFLTQTVNLSDGCAVKFEIWDTA 66
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A+VVYDV ++ SF W+ E++ S+V+I L GNK DL
Sbjct: 67 GQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDSNVVIALAGNKADL 126
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
+R V++EE + + ++ +ETSAK N+K LF IA LP T S+
Sbjct: 127 ETRRAVTLEEARQYAEDNGILHLETSAKTSANVKNLFVAIATNLPQSNTQSN-------- 178
Query: 187 VNLRSTTGNASQSQSQSSGC 206
R T A + S+S GC
Sbjct: 179 ---RDTFPLAQPTASKSKGC 195
>gi|119393795|gb|ABL74413.1| Rab5 [Anopheles gambiae]
Length = 213
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ ++WDTA
Sbjct: 22 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTA 81
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + SF W+ E++ + +++I L GNK DL
Sbjct: 82 GQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADL 141
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
R V EE + + + ++F+ETSAK N+ +F IA LP E +
Sbjct: 142 ANSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPKNEGAGPQQ------ 195
Query: 187 VNLRSTTGNASQSQSQSSGC 206
N+R T +++ Q+SGC
Sbjct: 196 -NIRPTQ---NETNRQNSGC 211
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 110/161 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++V+DV ++ SF KW+ E++ + ++++ L GNK+DL++ R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE + ++E + F+ETSAK N+K +F +IA LP
Sbjct: 132 KVTAEEAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172
>gi|340718353|ref|XP_003397633.1| PREDICTED: ras-related protein Rab-5C-like [Bombus terrestris]
gi|350401655|ref|XP_003486219.1| PREDICTED: ras-related protein Rab-5C-like [Bombus impatiens]
Length = 214
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F+ W+ E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E + + E ++F+ETSAK N+ +F IA LP E
Sbjct: 138 SNKRVVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR + ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKLPKNE 186
>gi|410911128|ref|XP_003969042.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSE 186
>gi|294899961|ref|XP_002776830.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239884031|gb|EER08646.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 232
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 121/202 (59%), Gaps = 11/202 (5%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
A +++ LGD +VGK+S++ RF ++FD+ + TIG+DF KT+ ++DR VRLQ+WDTAG
Sbjct: 22 ATARILVLGDSAVGKSSLLMRFCENRFDSNFVITIGVDFRVKTINIQDREVRLQIWDTAG 81
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QERFR++ P+Y R++ +++YD+ +SF N W+ + V +LVGNK D+
Sbjct: 82 QERFRTITPAYYRNAMGVLLIYDMTDSKSFKNVDYWVRNLDEHADKTVQKLLVGNKADMA 141
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL-----------PGMETL 176
KR+VS EEG+A + + + F ETSAK+G N++ FR IA + P +
Sbjct: 142 AKRKVSTEEGQALADKYGMTFFETSAKSGLNVEQAFRAIAERVCDSYDLLNGIEPRVHNN 201
Query: 177 SSTKQEEMVDVNLRSTTGNASQ 198
S V ++ R TG A +
Sbjct: 202 GSVASSNAVKLSDRRGTGGAGE 223
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 115/172 (66%), Gaps = 5/172 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++W
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIW 73
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNK 133
Query: 124 TDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
DLV +KR ++ E+ +RE ++F ETSAK N++ LF IA LP
Sbjct: 134 LDLVTEQPDKRAITTEDASNYAREAGLLFFETSAKTSENVRELFTAIAKKLP 185
>gi|344230490|gb|EGV62375.1| GTP-binding protein of the rab/ypt family [Candida tenuis ATCC
10573]
Length = 218
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 126/208 (60%), Gaps = 8/208 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR--TVRLQLWD 64
A++KLV LG+ +VGK+SI+ RF+ + FDN ++TIG FL++T+ L + T++ ++WD
Sbjct: 10 FAQFKLVLLGESAVGKSSIVHRFVKNTFDNFRESTIGAAFLTQTITLPESKTTIKFEIWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER++SL P Y R++ A+ VYD+ + SF WI E++ + ++I LVGNK
Sbjct: 70 TAGQERYKSLAPMYYRNAHAALCVYDITNPSSFTKAQDWIKELKKQAPEGIVICLVGNKL 129
Query: 125 DLVEKRQVSIEE-----GEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
DL E+RQV +E E +E NV++ E SAK+G + +F KI ALP E ++
Sbjct: 130 DLSEERQVDEQEVLQYVQELNHQENNVLWAECSAKSGEGVLDIFNKIGRALPVEEVINGA 189
Query: 180 KQEEMVDVNLRSTTGNASQSQS-QSSGC 206
+ + A Q+ S Q+SGC
Sbjct: 190 SSRARQVGSRKPGVDLARQAHSPQNSGC 217
>gi|345560497|gb|EGX43622.1| hypothetical protein AOL_s00215g358 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 125/209 (59%), Gaps = 12/209 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 13 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDT 72
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++I L GNK D
Sbjct: 73 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANESIVIALAGNKLD 132
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
L KR + + EA ++E ++F+ETSAK N++ LF IA LP +
Sbjct: 133 LATANPSKRAIETADAEAYAKEAGLLFLETSAKTAENVQELFTAIARKLPTDQAGPRRGA 192
Query: 182 EEM--VDVNLRSTTGNASQSQSQSSGCSC 208
+ VD+N T N + GC+C
Sbjct: 193 PGIRGVDMNRTPQTANLN-----GQGCAC 216
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 119/189 (62%), Gaps = 3/189 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD++++ SF KW+ E++ + ++++ L GNK DL++ R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLR 190
+V+ EE + ++E + FIETSAK N+ +F +IA LP ++ + ++D R
Sbjct: 132 KVTAEEAQVYAQEYGLFFIETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD---R 188
Query: 191 STTGNASQS 199
T AS S
Sbjct: 189 PTESTASAS 197
>gi|366990719|ref|XP_003675127.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
gi|342300991|emb|CCC68756.1| hypothetical protein NCAS_0B06720 [Naumovozyma castellii CBS 4309]
Length = 212
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 131/216 (60%), Gaps = 18/216 (8%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SA+ KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + D TV+ ++WD
Sbjct: 3 SAVTSIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNINDNTVKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYDV QSF+ WI E+ + D+II LVGNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHWIKELHEQANKDMIIALVGNKV 122
Query: 125 DLVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-----GMET 175
D++E +R+V+ EEGE + E ++F ETSAK G N+ F I +P ET
Sbjct: 123 DVLENNEDERKVAREEGEKLAEEEGLLFFETSAKTGLNVTETFVAIGEKIPLKTAGDQET 182
Query: 176 LS---STKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
S + E+ +D+ + +GNA+ Q++GCSC
Sbjct: 183 DSNGVAISDEQRIDL---ANSGNAA---GQTAGCSC 212
>gi|149235389|ref|XP_001523573.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452982|gb|EDK47238.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 221
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 124/220 (56%), Gaps = 19/220 (8%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP +A+ KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + DRT++ +
Sbjct: 6 APATAV---KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYE 62
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQERF SL P Y R++ A+VVYD+ SF+ W+ E+ + D+II LVG
Sbjct: 63 IWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDIIIALVG 122
Query: 122 NKTDLVEK---------------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
NK DLVE R+VS EEG+A + E ++F ETSAK +N+ +F I
Sbjct: 123 NKYDLVEDEPELESAAEGNTDLLRKVSKEEGQALADEEGLLFFETSAKTSYNVNDVFVAI 182
Query: 167 AAALPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGC 206
+P LS QE + + N + ++S+ C
Sbjct: 183 GGKIPET-NLSRGAQESTNEGGRIDLSTNPNAGATRSTCC 221
>gi|83315332|ref|XP_730748.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490566|gb|EAA22313.1| Rab1 protein [Plasmodium yoelii yoelii]
Length = 207
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 119/201 (59%), Gaps = 8/201 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YK++ +GD VGK+ I+ RF D F +Y TIG+DF +T+ ++D+ V+LQ+WDTAGQE
Sbjct: 13 YKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTLKVDDKVVKLQIWDTAGQE 72
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ +Y R + +++YD R SFL+ + W+ E+ D +LVGNK D ++
Sbjct: 73 RFRTITSAYYRGADGIIIIYDTTDRNSFLHINDWMAEINKYTNDDTCKLLVGNKFDCKDE 132
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL--PGMETLSSTKQEEMVDV 187
+V EGE+K++ELN+ FIETSAK N++ F I L + ++ V
Sbjct: 133 IEVPTAEGESKAKELNIPFIETSAKDSLNVELAFTMITQELIKKKKKKNINSVNNNQTKV 192
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
NL +S + QSS CSC
Sbjct: 193 NL------SSDDRDQSSLCSC 207
>gi|319401891|ref|NP_001187496.1| ras-related protein rab-5a [Ictalurus punctatus]
gi|308323159|gb|ADO28716.1| ras-related protein rab-5a [Ictalurus punctatus]
Length = 217
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 20 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 79
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 80 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 139
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR + ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 140 ASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 187
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 106/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 30 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 89
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF + W+ E+ + +++I L GNK DL
Sbjct: 90 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRATTWVKELHKQASPNIVIALAGNKADLS 149
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V EE + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 150 NIRVVEYEEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 193
>gi|348513153|ref|XP_003444107.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKNE 186
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 114/182 (62%), Gaps = 1/182 (0%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K++ +GD VGK+ ++ RF D + ++Y +TIG+DF KT+ +ED+ ++LQ+WDTAGQE
Sbjct: 9 FKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + ++VYDV R SF N WI E+ DV +L+GNK DL
Sbjct: 69 RFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKND 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
R VS EEG+ + N+ F+ETSAK N++ F+ +A + L + +Q+ ++NL
Sbjct: 129 RNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLEN-QQKGRANINL 187
Query: 190 RS 191
+
Sbjct: 188 NA 189
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex With
Gppnhp
Length = 170
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 4 ICQFKLVLLGESEVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|27066018|pdb|1N6O|A Chain A, Crystal Structure Of Human Rab5a A30k Mutant Complex With
Gppnhp
Length = 170
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 4 ICQFKLVLLGESKVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|115482198|ref|NP_001064692.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|78708729|gb|ABB47704.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639301|dbj|BAF26606.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|215687260|dbj|BAG91825.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765709|dbj|BAG87406.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 250
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 82 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAG 141
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R + A+VVYD+ S +SF W+ E++ D+I+ LVGNK DL
Sbjct: 142 QERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSPDMIMALVGNKADLH 201
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R VS ++ + + + FIETSAK NI LF +IA LP
Sbjct: 202 DNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRLP 245
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 118/182 (64%), Gaps = 1/182 (0%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+L + KL LGD VGK+S++ RF+ D F+ ++TIG F+SKT+ +ED+T + Q+WDT
Sbjct: 5 SLREVKLCLLGDAGVGKSSLVLRFVADSFNENSESTIGASFMSKTLIVEDQTFKYQIWDT 64
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQE++R L P Y R+++ A++VY++ +QSF W+ E+R S++I+ + GNK+D
Sbjct: 65 AGQEKYRGLAPMYYRNAAAAIIVYEITRKQSFEALKHWVKELRQFGPSNIILAIAGNKSD 124
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMV 185
L +RQVS +E + + ++ +F+ETSA N+ LF ++ LP E+++ K V
Sbjct: 125 LESQRQVSSDEAKEYADSIDALFVETSALTADNVSYLFEALSKRLP-QESIAQPKPASTV 183
Query: 186 DV 187
+
Sbjct: 184 QL 185
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 109/161 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F + ++TIG FL++T+ + + TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ + +SF KW+ E++ + +++++ L GNK DL KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNAESFARAKKWVQELQRQGNANLVMALAGNKADLAAKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
++ +EG++ + E + F+ETSAK N+ LF +IA LP
Sbjct: 132 KIETQEGQSYADENGLFFMETSAKTAENVNELFYEIARKLP 172
>gi|328856833|gb|EGG05952.1| hypothetical protein MELLADRAFT_116620 [Melampsora larici-populina
98AG31]
Length = 216
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ + F ++TIG FL++T+ L+D+T ++ ++WDTAG
Sbjct: 14 QFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVQLDDQTTIKYEIWDTAG 73
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVVVYD+ S S WI E++ + S ++I L GNK DL
Sbjct: 74 QERYKSLAPMYYRNANCAVVVYDITSSASLEKAKNWIRELQRQADSQIVIALAGNKADLE 133
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
E+RQVS + + E N++F ETSAK N+ +F+ IA LP
Sbjct: 134 ERRQVSTADARQFAEEENLLFFETSAKDATNVHEIFQAIAKKLP 177
>gi|27066009|pdb|1N6I|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp
gi|27066010|pdb|1N6K|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp And Aluminum Fluoride
gi|27066012|pdb|1N6L|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gtp
Length = 170
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 4 ICQFKLVLLGESPVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 106/168 (63%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++
Sbjct: 5 PGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEI 64
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R ++ A+VVYD+ + SF KW+ E++ + + I+ L GN
Sbjct: 65 WDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGN 124
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
K D+VE RQV EE + ++E + F+ETSAK N+ +F +IA L
Sbjct: 125 KADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|357119478|ref|XP_003561466.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 203
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 107/160 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+V LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KVVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVSDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A+VVYD++++ SF+ KW+ E++ + + ++ L GNK DL+E R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDISNQASFIRAKKWVQELQAQGNPNTVVALAGNKADLLETR 132
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
QV IEE + ++E + F+ETSAK N+ +F +IA L
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRL 172
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 136
Query: 126 LVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV+ KR + + +A ++E ++F ETSAK N++ LF +IA LP
Sbjct: 137 LVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLP 186
>gi|427784137|gb|JAA57520.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 191
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 105/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+ LGD VGK+SI+ RF+Y+ F+++ ++TIG F+ K + L DRT + +WDTAGQER
Sbjct: 8 KVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWDTAGQER 67
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+R+L P Y R + AV+VYD+ S +SF W+ E++ ++++ + GNK DL + R
Sbjct: 68 YRALAPMYYRGAGAAVIVYDITSMESFNAVQSWVRELQLHGDPNIVLGIAGNKCDLEDHR 127
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+VS+ GE+ + + +F+ETSA NI+ LF IA +P
Sbjct: 128 EVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKVP 168
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 5 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 64
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 65 GQERYHSLAPXYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 124
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F ETSAK N+ +F IA LP
Sbjct: 125 ANKRAVDFQEAQSYADDNSLLFXETSAKTSXNVNEIFXAIAKKLP 169
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 105/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLVVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ S SF KW+ E++ + ++++ L GNK DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V++EE + E + F+ETSAK N+ +F +IA LP
Sbjct: 132 KVTVEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLP 172
>gi|27066016|pdb|1N6N|A Chain A, Crystal Structure Of Human Rab5a A30r Mutant Complex With
Gppnhp
Length = 170
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 4 ICQFKLVLLGESRVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|350537173|ref|NP_001232748.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128640|gb|ACH45138.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 216
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F+ W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ + + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|89258417|gb|ABD65432.1| Rab5 [Suberites domuncula]
Length = 207
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 107/165 (64%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++
Sbjct: 15 PREKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEI 74
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R + A+VVYD+ + +F+ W+ E++ + +++I L GN
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNNDTFVRAKSWVKELQRQASPNIVIALAGN 134
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
K DL KR V EE + E +++F+ETSAK N+ +F IA
Sbjct: 135 KADLASKRMVDFEEAHVYAEENSLLFMETSAKTAMNVNDIFLAIA 179
>gi|115454491|ref|NP_001050846.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|40538929|gb|AAR87186.1| putative small GTP-binding protein [Oryza sativa Japonica Group]
gi|108710277|gb|ABF98072.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113549317|dbj|BAF12760.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|215692370|dbj|BAG87790.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695240|dbj|BAG90431.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 104/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A+VVYD+ + SF KW+ E++ + S ++ L GNK DL+E R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALAGNKADLLETR 132
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
QV IEE + ++E + F+ETSAK N+ +F +IA L
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRL 172
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 106/160 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 73
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A+VVYD+ + SF KW+ E++ + S+ I+ L GNK DL++ R
Sbjct: 74 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIVALAGNKADLLDTR 133
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
QVS +E +A ++E + F+ETSAK N+ +F +IA L
Sbjct: 134 QVSADEAKAYAQENGLFFMETSAKTATNVNDVFYEIAKKL 173
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++K+V LGD SVGK+SI+ R ++ + TIG FL+KT+ ++ T++ + WDTAGQ
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKGEYKEFQENTIGAAFLTKTLIVDKDTIKFECWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R S+ A+VV+D+ S S+ KW+DE+R E +D +I LVGNK DL
Sbjct: 68 ERYHSLTPMYYRGSNAALVVFDITSDSSYAQAKKWVDELR-ESANDTMIFLVGNKCDLEG 126
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
R V+ E+ EA +R ++V +IETSAK+ N+ LF +A LP E
Sbjct: 127 SRSVTKEDAEAYARSISVDYIETSAKSNINVSELFDLVARKLPKTE 172
>gi|332017090|gb|EGI57889.1| Ras-related protein Rab-5C [Acromyrmex echinatior]
Length = 214
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 108/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E + + E ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
gi|126093571|gb|ABN68260.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
Length = 215
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 120/210 (57%), Gaps = 17/210 (8%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK- 129
F SL P Y R++ A+VVYD+ SF+ W+ E+ + D+ I LVGNK DLVE
Sbjct: 71 FASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQASKDITIALVGNKYDLVEDD 130
Query: 130 ------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-----GMETLSS 178
R+VS+EEG+ + E ++F ETSAK +N+ +F I + +P G +
Sbjct: 131 TEEESLRKVSVEEGKGLAEEEGLLFFETSAKTSYNVNDVFIGIGSKIPEAASAGPNQIHQ 190
Query: 179 TKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
T + +D+ T + + + C+C
Sbjct: 191 TNNDGRIDL-----TSDPNNRPRAAGDCAC 215
>gi|422294642|gb|EKU21942.1| Ras-related protein Rab-5C, partial [Nannochloropsis gaditana
CCMP526]
Length = 261
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++ + LED TV+ ++WDTA
Sbjct: 72 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTA 131
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSL P Y R +S A+VVYD+ + +SF W+ E++ VII L GNK DL
Sbjct: 132 GQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADL 191
Query: 127 V-EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V +++ E +RE ++ ETSAK N+K LF +IA LP
Sbjct: 192 AGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLP 237
>gi|307189232|gb|EFN73680.1| Ras-related protein Rab-5C [Camponotus floridanus]
gi|322784961|gb|EFZ11732.1| hypothetical protein SINV_10350 [Solenopsis invicta]
Length = 214
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 108/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E + + E ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 112/170 (65%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
LV +KR + + EA ++E ++F ETSAK N+ LF IA LP
Sbjct: 137 LVTEQPDKRAIPAADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKLP 186
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 108/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E + + E ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|325303414|tpg|DAA34126.1| TPA_exp: Rab5-related subfamily protein 481 [Amblyomma variegatum]
Length = 179
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 APQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAG 133
Query: 122 NKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
NK DL +R V +EE +A S E ++F+ETSAK +F IA
Sbjct: 134 NKADLASQRAVELEEAQAYSEEXGLLFMETSAKTAMKRHDIFLAIA 179
>gi|168030601|ref|XP_001767811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680893|gb|EDQ67325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 111/168 (66%), Gaps = 2/168 (1%)
Query: 12 LVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQER 70
LV LGD VGK+ I+ RF+ +FD + + T+G FLS+T+ L+D T V+ ++WDTAGQER
Sbjct: 5 LVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIWDTAGQER 64
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ AVVVYD+ + ++FL W+ E++ D+++ LVGNK DL +R
Sbjct: 65 YASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLENER 124
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-GMETLS 177
+VS E +A ++ + FIETSAK N+ LF +IA LP G +LS
Sbjct: 125 EVSHAEAQAYAKSNGMFFIETSAKTSENVNQLFEEIAKRLPRGQSSLS 172
>gi|224142139|ref|XP_002324416.1| predicted protein [Populus trichocarpa]
gi|222865850|gb|EEF02981.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 106/160 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GKTS++ RF+ +F ++TIG F ++ + L + T++ +WDTAGQER
Sbjct: 12 KLVLLGDMGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIKFDIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ AVVVYD+ S SF KW+ E++ + ++I+ LVGNK DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVTELQRQGNPNLIMFLVGNKVDLQQKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
+V IEEGE ++E ++F+ETSAK N+ LF +IA L
Sbjct: 132 KVGIEEGEQYAKENGMVFLETSAKTAQNVNELFYEIAKRL 171
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 106/168 (63%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++
Sbjct: 5 PGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEI 64
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R ++ A+VVYD+ + SF KW+ E++ + + I+ L GN
Sbjct: 65 WDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGN 124
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
K D+VE RQV EE + ++E + F+ETSAK N+ +F +IA L
Sbjct: 125 KADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG F ++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGSCFSTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYAEDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|321476259|gb|EFX87220.1| hypothetical protein DAPPUDRAFT_230436 [Daphnia pulex]
Length = 227
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 108/165 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 30 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 89
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GNK DL
Sbjct: 90 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKVWVKELQRQASPNIVIALAGNKADL 149
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E + + E ++F+ETSAK N+ +F IA LP
Sbjct: 150 AAKRAVEFDEAKGYAEENGLLFMETSAKTAMNVNDIFLAIAKKLP 194
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR-TVRLQLWDTA 66
+KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ LED TV+ ++WDTA
Sbjct: 7 CHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTA 66
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A+VVYDV ++ SF W+ E++ +V+I L GNK DL
Sbjct: 67 GQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADL 126
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V EE + + +++ +ETSAK N+K LF IA LP
Sbjct: 127 EARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLP 171
>gi|344303655|gb|EGW33904.1| hypothetical protein SPAPADRAFT_59281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 124/209 (59%), Gaps = 13/209 (6%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK- 129
F SL P Y R++ A+VVYD+ SF+ W+ E+ + D+ I LVGNK DLV+
Sbjct: 71 FASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQAAKDITIALVGNKYDLVQDD 130
Query: 130 ----------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
R+VS+EEG+ + E ++F ETSAK +N+ +F I +P +L+S+
Sbjct: 131 DEGQGEREGVRKVSVEEGQNLAAEEGLLFYETSAKTSYNVNDVFIGIGNKIPEAASLASS 190
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
++ + + +T NAS S + CSC
Sbjct: 191 PEQNNNEGRIDLST-NAS-SNGNRNLCSC 217
>gi|45383121|ref|NP_989856.1| ras-related protein Rab-5C [Gallus gallus]
gi|326934183|ref|XP_003213173.1| PREDICTED: ras-related protein Rab-5C-like [Meleagris gallopavo]
gi|82246551|sp|Q98932.1|RAB5C_CHICK RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like
protein
gi|1531769|emb|CAA69142.1| rab5C-like protein [Gallus gallus]
gi|449267489|gb|EMC78432.1| Ras-related protein Rab-5C [Columba livia]
Length = 216
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F+ W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ + + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|145522440|ref|XP_001447064.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831433|emb|CAI39304.1| rab_A70 [Paramecium tetraurelia]
gi|124414564|emb|CAK79667.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 112/161 (69%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K + +GD SVGK+ ++ +F+ KF + TIG++F SKT+ + + ++LQ+WDTAGQE
Sbjct: 8 FKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQIWDTAGQE 67
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
F+S+ SY R S A++VYDV SR SF N ++W++E ++ + +VLV NKTDL +K
Sbjct: 68 SFKSITRSYYRGSICALIVYDVTSRDSFENITRWMEETKSYANDKITLVLVANKTDLSDK 127
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
R +S EEG+ +++ +++F+E SAK GF + +F++ A A+
Sbjct: 128 RVISAEEGQTFAKKHDLIFVEASAKTGFQVDKIFQEAAEAV 168
>gi|294879180|ref|XP_002768586.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239871257|gb|EER01304.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 238
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 109/160 (68%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
A +++ LGD +VGK+S++ RF ++FD+ + TIG+DF KT+ +++R +RLQ+WDTAG
Sbjct: 28 ATARILVLGDSAVGKSSLLMRFCENRFDSNFVITIGVDFRVKTLDIQERKIRLQIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QERFR++ P+Y R++ +++YD+ +SF N W+ + V +LVGNK D+
Sbjct: 88 QERFRTITPAYYRNAMGVLLIYDMTDLKSFKNVDYWVRNLDQHADKTVQKLLVGNKADMA 147
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
KR+VS EEG+A + + + F ETSAK+G N++ FR IA
Sbjct: 148 AKRKVSTEEGQALADKYGMTFFETSAKSGLNVEAAFRAIA 187
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK D+
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADI 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR + +E +A + + +++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAIDQQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|4678309|emb|CAB41100.1| small GTP-binding protein-like (fragment) [Arabidopsis thaliana]
Length = 224
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL
Sbjct: 91 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
EKR+V E+G + + + FIETSAK NI LF + LP
Sbjct: 151 EKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEVCTSFLP 194
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 115/172 (66%), Gaps = 5/172 (2%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++W
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIW 73
Query: 64 DTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L GNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNK 133
Query: 124 TDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
DLV +KR ++ E+ ++E ++F ETSAK N++ LF IA LP
Sbjct: 134 LDLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKLP 185
>gi|27066021|pdb|1N6R|A Chain A, Crystal Structure Of Human Rab5a A30l Mutant Complex With
Gppnhp
Length = 170
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 4 ICQFKLVLLGESLVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQE + SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQEGYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|346473575|gb|AEO36632.1| hypothetical protein [Amblyomma maculatum]
Length = 194
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 109/171 (63%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
M+ ++ + K+ LGD VGK+SI+ RF+Y+ F+++ ++TIG F+ K + L DRT +
Sbjct: 1 MSTMNTTTEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKF 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
+WDTAGQER+R+L P Y R ++ AV+VYD+ S SF W+ E++ ++ + +
Sbjct: 61 NIWDTAGQERYRALAPMYYRGAAAAVIVYDITSMDSFNAVQSWVRELQLHGEQNIALGIA 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK DL + R+VS+ GE+ + + +F+ETSA NI+ LF IA +P
Sbjct: 121 GNKCDLEDHREVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKVP 171
>gi|116782322|gb|ABK22463.1| unknown [Picea sitchensis]
gi|116793226|gb|ABK26663.1| unknown [Picea sitchensis]
gi|224284237|gb|ACN39854.1| unknown [Picea sitchensis]
Length = 200
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 111/166 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + + +V+L++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVKLEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ + SF+ KW+ E++ + ++++ L GNK+D++EK
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLDSFVRAKKWVQELQKQGNPNMVMALAGNKSDMIEKS 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
+VS EE + ++E + F+ETSAK N+ LF +IA LP E +
Sbjct: 132 KVSPEEAKVYAQENGLFFMETSAKTAQNVNELFYEIARRLPKAEPV 177
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 110/161 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++V+DV ++ SF KW+ E++ + ++++ L GNK+DL++ R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ E+ + ++E + F+ETSAK N+K +F +IA LP
Sbjct: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172
>gi|294950399|ref|XP_002786610.1| Rab5, putative [Perkinsus marinus ATCC 50983]
gi|239900902|gb|EER18406.1| Rab5, putative [Perkinsus marinus ATCC 50983]
Length = 226
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 9/184 (4%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMY-LEDRTV--R 59
P++ L +KLV LGD SVGK+ ++ RF +F + TIG F+++T+ D V +
Sbjct: 17 PLTVL-HHKLVLLGDASVGKSCMVVRFARGEFYEYQEPTIGAAFMTQTVSPFPDSPVQIK 75
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
++WDTAGQER+RSL P Y R ++ AVVVYD+ SR+SF +W++E+R+ DV+I
Sbjct: 76 FEIWDTAGQERYRSLAPMYYRGAAAAVVVYDITSRESFEGAKRWVNELRSSHNPDVVIAF 135
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
GNK+DL E+R+V + G ++E +++F+ETSAK G N+ +F +I G L
Sbjct: 136 CGNKSDLAEEREVPTQRGAEYAQENDLLFVETSAKTGANVHHVFVEI-----GQGELGKA 190
Query: 180 KQEE 183
+EE
Sbjct: 191 NKEE 194
>gi|384493256|gb|EIE83747.1| ras protein [Rhizopus delemar RA 99-880]
Length = 208
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D FD ++TIG FL++T+ L+D T V+ ++WDTAG
Sbjct: 11 QFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVKFEIWDTAG 70
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK+DL
Sbjct: 71 QERYKSLAPMYYRNANCAVIVYDITQASSLDKAKAWVNELQRQADPNIVIALAGNKSDLG 130
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+R + + + + E ++F ETSAK N+ LF IA +P ++ L+ + ++ +
Sbjct: 131 ARRAIETKVAQEYADEAGLLFFETSAKTAENVHDLFLAIAKRMP-LDQLADSSRKNRNGL 189
Query: 188 NLRS----TTGNASQSQSQSSGCSC 208
N R TGN ++GC+C
Sbjct: 190 NSRGVDLENTGN------DANGCAC 208
>gi|392570863|gb|EIW64035.1| GTP-binding protein RAB5 [Trametes versicolor FP-101664 SS1]
Length = 209
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 126/209 (60%), Gaps = 14/209 (6%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ LED T V+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLEDSTTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVVVYD+ S WI E++ + ++I L GNK DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSTSLEKAKSWIRELQRQADPSIVIALCGNKLDLA 125
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP--------GMETLSST 179
+RQVS EE + + E +M+ ETSAK+G + +F IA LP G +
Sbjct: 126 ARRQVSQEEAKKYAEEEGLMWGETSAKSGEGVSEIFNAIAKKLPLTAAPSARGGASRPGA 185
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
VD+N ++ G Q Q+ C+C
Sbjct: 186 AGRTGVDLNKQAAGG-----QGQNEACNC 209
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
Length = 207
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 131/212 (61%), Gaps = 17/212 (8%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR----TVRLQL 62
+ ++KLV LGD SVGK+SI+ RF+ D F++ ++TIG FLS+T+ L D V+ ++
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVNRFVKDSFEDLRESTIGAAFLSQTIKLNDNGKEVIVKFEI 60
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSD-VIIVLVG 121
WDTAGQER++SL P Y R+++ A+VVYD+ S W++E++ + G D ++I LVG
Sbjct: 61 WDTAGQERYKSLAPMYYRNANAALVVYDITELDSLNKAKTWVEELKNKVGDDNIVIYLVG 120
Query: 122 NKTDLVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
NK D+ E KR VS+E + ++E ++FIETSAK G NIK F++I E L
Sbjct: 121 NKLDVCEKDSSKRLVSLEGAKEYAKEQGLLFIETSAKTGANIKETFQEIG------EKLY 174
Query: 178 STKQEEMVDVNLRSTTGNASQSQ-SQSSGCSC 208
K+ E V+ +L TG S+ S + SC
Sbjct: 175 DIKKTE-VNTDLDGNTGEIEISKPSTNDTTSC 205
>gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A+ + K+ LGD VGK+SI+ RF+ D FD+ TIG FL+KT+ + + +WDT
Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SL P Y R S+ AV+VYD+ SF KW+ E++ D+++ + GNK D
Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKND 121
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
L + R+V +E + + + +FIETSA+ NI+ LF+KI+ +P +E
Sbjct: 122 LGDIREVPTKEAKEFAESIAALFIETSARNAVNIEELFQKISKQIPPLEN 171
>gi|260946147|ref|XP_002617371.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
gi|238849225|gb|EEQ38689.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
Length = 213
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 125/219 (57%), Gaps = 22/219 (10%)
Query: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 61
AP +++ KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + DRT++ +
Sbjct: 5 APATSV---KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTVGDRTIKYE 61
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQERF SL P Y R++ A+VVYD+ SF+ W+ E+ + D+ I LVG
Sbjct: 62 IWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQAAKDITIALVG 121
Query: 122 NKTDLVEK--------RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF----RKIAAA 169
NK DLV R+VS+ EG+A + E ++F ETSAK N+ +F KI A
Sbjct: 122 NKYDLVAADNDTDESLRKVSVAEGQALAEEEGLLFFETSAKTSHNVNDVFVAIGSKIPEA 181
Query: 170 LPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
P ET + +D+ +GN +S +S C+C
Sbjct: 182 KPADETPGPRGESGRIDL-----SGNG--QRSGASDCAC 213
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+ ++ RF D + +T+ ATIG+DF KT+ ++ + V+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + +VVY V Q+F N +W+ E+ VI +L+GNK DL ++
Sbjct: 69 RFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASETVIKLLIGNKCDLEDE 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAA-ALPGMETLSSTKQEEMVDV 187
R V++E+G+ + LNV F+E SAK N+ LF KIA + ++ S++K E D+
Sbjct: 129 RAVTVEQGQELANSLNVSFMEASAKKSLNVDELFNKIATDIMKNIQPASTSKPSEQADL 187
>gi|55962807|emb|CAI11701.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 180
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 107/165 (64%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++
Sbjct: 14 PQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEI 73
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R + A+VV+D+ ++F W+ E++ + +++I L GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGN 133
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
K DL +KR V EE + + + ++F+ETSAK N+ LF I
Sbjct: 134 KADLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIG 178
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 105/168 (62%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++
Sbjct: 5 PGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEI 64
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R ++ A+VVYD+ + SF KW+ E++ + + I+ L GN
Sbjct: 65 WDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGN 124
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
K D++E RQV EE ++E + F+ETSAK N+ +F +IA L
Sbjct: 125 KADMIEARQVPAEEARTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 121/199 (60%), Gaps = 3/199 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+ ++ RF D + +T+ ATIG+DF KT+ + V+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQINGLNVKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + +VVY V Q+F N +W+ E+ VI +L+GNK DL ++
Sbjct: 69 RFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQWLQEIERYASESVIKLLIGNKCDLEDE 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
R V++E+G+ + LNV F+E+SAK N+ LF KIA + M+ L ++ D
Sbjct: 129 RAVTVEQGQELANSLNVSFMESSAKKALNVDELFNKIATDI--MKNLQTSNTPSKTDDKA 186
Query: 190 RSTTGNA-SQSQSQSSGCS 207
+ GN ++ + + S CS
Sbjct: 187 NLSKGNGKAKPEKKKSFCS 205
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 117/189 (61%), Gaps = 3/189 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ S SF KW+ E++ + ++++ L GNK+DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALTGNKSDLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLR 190
+V+ EE + E + F+ETSAK+ N+ +F +IA LP + + +VD R
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNPAGMVLVD---R 188
Query: 191 STTGNASQS 199
T G+ + S
Sbjct: 189 PTEGSRAAS 197
>gi|303390262|ref|XP_003073362.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303302508|gb|ADM12002.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 197
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 116/171 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K+V LG SVGK+S++ +++ +F+ ++TIG FL+KT++ + +++ ++WDTAGQE
Sbjct: 13 FKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTPEGSIKFEIWDTAGQE 72
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
R+ SLIP Y R + VA++VYD+ S +SF +W++E+ E+ + I VL+GNK+DL E
Sbjct: 73 RYNSLIPMYYRGAQVALIVYDITSVESFETAKRWVEELSFEKPREFIKVLIGNKSDLEED 132
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
R+V ++G+ + N++F E+SAK G NI +F IA +P E +TK
Sbjct: 133 RKVEFQQGKEYADSQNLLFFESSAKTGKNIAEIFNAIAEKVPKEEVKKNTK 183
>gi|440794437|gb|ELR15598.1| ras-related protein Rab-2A, putative [Acanthamoeba castellanii str.
Neff]
Length = 200
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 113/165 (68%), Gaps = 4/165 (2%)
Query: 3 PVSALAKYKLVF----LGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV 58
P S YK +F +GD +VGK+ ++ +F +F + TIG++F S+T+ +ED V
Sbjct: 12 PPSQALPYKYLFKYIIVGDTAVGKSCLLLQFTDKRFQPVHDLTIGVEFGSRTLTIEDNQV 71
Query: 59 RLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIV 118
+LQ+WDTAGQE+FRS+ SY R ++ A++VYD+ R++F + + W+++ R S+++I+
Sbjct: 72 KLQIWDTAGQEKFRSITRSYYRGAAGALLVYDITRRETFEHLTSWLEDCRKYSNSNIVIM 131
Query: 119 LVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 163
L+GNK DL KRQVS EEG A ++E N++F+ETSAK N++ F
Sbjct: 132 LIGNKCDLESKRQVSKEEGAAFAKEHNLLFLETSAKTAENVEQAF 176
>gi|308321755|gb|ADO28020.1| ras-related protein rab-5a [Ictalurus furcatus]
Length = 217
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 20 ICQFKLVLLGESAVGKSSLMLRFVKGQFHEFQESTIGGAFLTQTVCLDDTTVKFEIWDTA 79
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 80 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 139
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR + ++ ++ + + +++F+ETSAK N+ +F IA LP E
Sbjct: 140 ASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 187
>gi|294896680|ref|XP_002775678.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239881901|gb|EER07494.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 188
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 119/171 (69%), Gaps = 12/171 (7%)
Query: 42 IGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNT 100
+GIDF++K + L+D R ++LQLWDTAGQERFRSLIP+Y+RD++ VVV+D++S++SF +
Sbjct: 24 LGIDFVAKVITLDDGRMIKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLSSKESFNSV 83
Query: 101 SKWIDEVRTERGSD--VIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFN 158
W+D+VR E+G++ V IVLVGNK D+ + RQVS EE A + EL + + ETSAK+G +
Sbjct: 84 RSWVDQVRDEKGTNGGVEIVLVGNKADMADLRQVSNEEANALAEELGLKYFETSAKSGID 143
Query: 159 IKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNA---SQSQSQSSGC 206
I +F +IA ++P + + +R T+G+ + ++SQS GC
Sbjct: 144 IDEIFTEIAKSIPEEDPVLGGSN------TIRVTSGDELSNAAAKSQSCGC 188
>gi|403167509|ref|XP_003327295.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167062|gb|EFP82876.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 215
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ + F ++TIG FL++T+ + E T++ ++WDTAG
Sbjct: 15 QFKLVLLGESAVGKSSLVLRFVQNDFQEYRESTIGAAFLTQTVKINEQTTIKFEIWDTAG 74
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVVVYD+ S S WI E++ + + ++I L GNK DL
Sbjct: 75 QERYKSLAPMYYRNANCAVVVYDITSSASLEKAKVWIRELQKQADAQIVIALAGNKADLE 134
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
E+RQV EE + + E N++F ETSAK N+ +F IA LP S +
Sbjct: 135 ERRQVPTEEAQRFAEEENLLFFETSAKDSTNVTDIFTAIAKKLPLDSAASRGPRGSASGA 194
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
+ +Q+++Q C+C
Sbjct: 195 RTSGAGVSLNQAETQDGPCAC 215
>gi|410923777|ref|XP_003975358.1| PREDICTED: ras-related protein Rab-31-like [Takifugu rubripes]
Length = 194
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A+ + K+ LGD VGK+SI+ RF+ D FD+ TIG FL+KT+ + +WDT
Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SL P Y R S+ AV+VYD+ SF KW+ E++ D+++ + GNK D
Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKND 121
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
L + R+V ++E + + + +FIETSA+ NI+ LF+KI+ +P +E
Sbjct: 122 LGDIREVPMKEAKEFAESIAAIFIETSARNAVNIEELFQKISKQIPPLEN 171
>gi|388579646|gb|EIM19967.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 231
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 125/221 (56%), Gaps = 23/221 (10%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ LED+ ++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSVVLRFVQNDFQEYKEPTIGAAFLTQKCRLEDKVIKFEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-- 128
FRSL P Y R++ AVVVYD+ S SF W+ E++ + +VII LVGNK DLVE
Sbjct: 71 FRSLAPMYYRNALSAVVVYDITSSSSFEKAKSWVKELQRQASPNVIIALVGNKLDLVEGS 130
Query: 129 -------------------KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAA 169
R +S +E +A + E N++F ETSAK G + +F +IA
Sbjct: 131 QEEEEEERDDATATPNQDQSRAISRDEAQAYAEESNLLFFETSAKTGEGVVEVFTEIAKK 190
Query: 170 LPGMETLSSTKQEEMVDVNLRSTTGNASQSQSQSSG--CSC 208
+P + ++STK + NA+ QS+ G C+C
Sbjct: 191 IPLEQIVNSTKSRAQDQTQQNNVNLNANNGQSKQVGDNCAC 231
>gi|198426781|ref|XP_002122313.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 217
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 122/202 (60%), Gaps = 7/202 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLQDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
KR V ++ + + E ++F+ETSAK ++ +F IA LP E +S ++
Sbjct: 139 SNKRMVEHDDAVSYAEENGLLFMETSAKTAMHVNDIFLAIAEKLPKNEAGASANRQS-AG 197
Query: 187 VNLRSTTGNASQSQSQSSGCSC 208
V L +T + SG SC
Sbjct: 198 VGLTAT------DNREGSGKSC 213
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 118/190 (62%), Gaps = 11/190 (5%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+ ++ RF D + ++Y +TIG+DF +T+ LE++TV+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + ++VYDV R SF N +WI E+ +V +LVGNK DLV K
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSK 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
R V+ +EG + + FIETSAK +N++ F +A + ++ V VN
Sbjct: 129 RVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEI-----------KKRVQVNS 177
Query: 190 RSTTGNASQS 199
++T G+A Q
Sbjct: 178 QNTRGSAQQG 187
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 110/161 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 73
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++V+DV ++ SF KW+ E++ + ++++ L GNK+DL++ R
Sbjct: 74 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 133
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ E+ + ++E + F+ETSAK N+K +F +IA LP
Sbjct: 134 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 174
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 121/204 (59%), Gaps = 5/204 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD VGK+ ++ RF D F +Y TIG+DF +T+ +++ V+LQ+WDTAGQE
Sbjct: 14 FKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQE 73
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ +Y R + V+VYDV R SF + +W+ EV + +LVGNK + +
Sbjct: 74 RFRTITSAYYRGADGIVLVYDVTDRDSFGHVDEWLAEVNRYANENTCKILVGNKCEKADD 133
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGM-ETLSSTKQEEMVDVN 188
RQVS EEG+ K+ EL + FIETSAK N+ F +A L M ++ S+
Sbjct: 134 RQVSAEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELIKMKQSASAAGGRSAGPQG 193
Query: 189 LR---STTGNASQSQSQSSG-CSC 208
+R TG +++ +Q SG CSC
Sbjct: 194 MRIASQPTGAENRAMAQRSGNCSC 217
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 111/175 (63%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ SVGK+S++ RF+ +F ++TIG FL++T++L D V+ ++WDTA
Sbjct: 18 ICQFKLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTIHLNDVAVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ ++ +F W+ E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQATPGIVIALAGNKLDL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
R V +E + + E ++F+ETSAK N+ +F+ IA LP ET ++ Q
Sbjct: 138 NTMRSVQTDESQTYAYENGLLFMETSAKTSANVTEIFKAIAEKLPKNETTNTAGQ 192
>gi|302694753|ref|XP_003037055.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
gi|300110752|gb|EFJ02153.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
Length = 208
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+D TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDGTTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVVVYD+ S WI E++ + ++I L GNK DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSTSLEKARTWIRELQRQADPSIVIALCGNKADLA 125
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQV+ EE + + E +M+ ETSAK G + +F IA LP
Sbjct: 126 ARRQVTQEEAQKYAEEEGLMWGETSAKTGEGVADIFTAIAKKLP 169
>gi|348521996|ref|XP_003448512.1| PREDICTED: ras-related protein Rab-31-like [Oreochromis niloticus]
Length = 194
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 106/170 (62%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A+ + K+ LGD VGK+SI+ RF+ D FD+ TIG FL+KT+ + + +WDT
Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SL P Y R S+ AV+VYD+ SF KW+ E++ D+++ + GNK D
Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKND 121
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
L + R+V ++E + + + +FIETSA+ N++ LF+KI+ +P +E
Sbjct: 122 LGDIREVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQIPPLEN 171
>gi|401623607|gb|EJS41700.1| vps21p [Saccharomyces arboricola H-6]
Length = 210
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 107/164 (65%), Gaps = 3/164 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-- 128
F SL P Y R++ A+VVYDV QSF+ W+ E+ + D+II LVGNK D+++
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKVDMLQEG 128
Query: 129 -KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V+ EEGE + E ++F ETSAK G N+ +F I +P
Sbjct: 129 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 113/157 (71%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K+V +GD +VGK++++ R+ ++F ++TIG++F ++TM ++ + ++ Q+WDTAGQE
Sbjct: 15 FKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQIWDTAGQE 74
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ +Y R + A+VVYD++ RQ+F N S+W+DE+ T +V+ V+VGNKTDL++
Sbjct: 75 RFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVGNKTDLLDA 134
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
R+VS EEG A + N+ F+ETSA N++ F+ +
Sbjct: 135 REVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTV 171
>gi|432911409|ref|XP_004078665.1| PREDICTED: ras-related protein Rab-31-like [Oryzias latipes]
Length = 194
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 106/170 (62%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
A+ + K+ LGD VGK+SI+ RF+ D FD+ TIG FL+KT+ + + +WDT
Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQERF SL P Y R S+ AV+VYD+ SF KW+ E++ D+++ + GNK D
Sbjct: 62 AGQERFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKND 121
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
L + R+V ++E + + + +FIETSA+ N++ LF+KI+ +P +E
Sbjct: 122 LGDIREVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQIPPLEN 171
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 104/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A+VVYD+ + SF KW+ E++ + + I+ L GNK D+++ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDAR 132
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
QV EE +A ++E + F+ETSAK N+ +F +IA L
Sbjct: 133 QVPAEEAKAYAQENGLFFMETSAKTAINVNDIFYEIAKKL 172
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ S SF KW+ E++ + ++++ L GNK DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE + E + F+ETSAK N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLP 172
>gi|332375757|gb|AEE63019.1| unknown [Dendroctonus ponderosae]
Length = 258
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 2/199 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNT-YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+K + LGD VGKTS++ +F KF+++ + AT+GI F +K + ++D V+LQ+WDTAGQ
Sbjct: 60 HKTILLGDSGVGKTSLLVKFDTGKFESSKFSATVGIGFTTKVVQVDDSKVKLQIWDTAGQ 119
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERFR + +Y RD+ +++YDV +++SF N W+ E++ DV+I+L+GNK D
Sbjct: 120 ERFRCVTHAYYRDAHALLLLYDVTNKKSFDNIRAWLGEIKDYAHDDVVIMLLGNKADCGS 179
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 188
R + EEGE +RE V F+ETSAK+G N++ F IA L ++ Q V
Sbjct: 180 DRAIKREEGERLAREYRVTFMETSAKSGQNVELAFHAIARDLTSRNAANADPQRFNVQDY 239
Query: 189 LRSTTGNASQSQSQSSGCS 207
+R+ + +S Q + C+
Sbjct: 240 VRAQAQHGPES-PQCAACA 257
>gi|444317893|ref|XP_004179604.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
gi|387512645|emb|CCH60085.1| hypothetical protein TBLA_0C02780 [Tetrapisispora blattae CBS 6284]
Length = 220
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV-RLQLWDT 65
+ ++KLV LGD SVGK+SI+ RF+ D FD ++TIG FLS+T+ L+++TV + ++WDT
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVNRFVKDSFDELRESTIGAAFLSQTITLKNKTVIKFEIWDT 60
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGS-DVIIVLVGNKT 124
AGQER++SL P Y R+++ A+VVYD+ S + W+DE++++ G +++I LVGNK
Sbjct: 61 AGQERYKSLAPMYYRNANAALVVYDITENDSLMKAQSWVDELKSKVGDENLVICLVGNKI 120
Query: 125 DLVE----KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
DL + KR V ++ + + E N+MF E SAK+G N+K +F+ I L
Sbjct: 121 DLCDEDESKRVVLTKDAKDYADEQNLMFYEVSAKSGENVKEVFQVIGEKL 170
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 105/168 (62%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++
Sbjct: 5 PGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEI 64
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ L P Y R ++ A+VVYD+ + SF KW+ E++ + + I+ L GN
Sbjct: 65 WDTAGQERYHGLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGN 124
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
K D+VE RQV EE + ++E + F+ETSAK N+ +F +IA L
Sbjct: 125 KADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 126/199 (63%), Gaps = 5/199 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD SVGK+ ++ RF D + +TY +TIG+DF +T+ L+ ++V+LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + ++VYDV R+SF N +W+ E+ V +LVGNK DLV+
Sbjct: 70 RFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVDS 129
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG-METLSSTKQEEMVDVN 188
+ V EE +A + L + F+ETSAK N++ F +++ + M + + +++ V V+
Sbjct: 130 KVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKNKMASQPAAERKSTVHVH 189
Query: 189 LRSTTGNASQSQSQSSGCS 207
++ G Q Q QSS CS
Sbjct: 190 MK---GQPIQ-QQQSSCCS 204
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + +VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E ++ + + +++F++TSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMKTSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF W+ E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V +E + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 190
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF W+ E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V +E + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 190
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF W+ E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V +E + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 190
>gi|297263149|ref|XP_001094209.2| PREDICTED: ras-related protein Rab-43-like [Macaca mulatta]
Length = 270
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 127/206 (61%), Gaps = 7/206 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD SVGKT ++ RF F +TIG+DF KT+ ++ + V+LQ+WDTAGQE
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R ++ A++ YD+ R SFL+ WI++VR GS+++ +L+GNK+DL E
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSEL 138
Query: 130 RQVSIEEGEAKSRELNVMF-IETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQEEMVD 186
R+VS+ E ++ + +++ IETSAK N++ F ++A L L S K + +
Sbjct: 139 REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQ 198
Query: 187 VNLR----STTGNASQSQSQSSGCSC 208
+N + +TG++ S + S C
Sbjct: 199 LNSKDXRGPSTGHSPDSATHSHTRLC 224
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 28 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF W+ E+ + +++I L GNK DL
Sbjct: 88 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 147
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V +E + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 148 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 191
>gi|145332843|ref|NP_001078287.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|222423401|dbj|BAH19672.1| AT3G54840 [Arabidopsis thaliana]
gi|332645778|gb|AEE79299.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 193
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAV+VYD+ S +SF W+ E++ D+++ LVGNK DL
Sbjct: 93 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLF 163
EKR+V E+G + + + FIETSAK NI LF
Sbjct: 153 EKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188
>gi|443897405|dbj|GAC74746.1| GTPase Rab5/YPT51 [Pseudozyma antarctica T-34]
Length = 221
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 114/167 (68%), Gaps = 2/167 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
+ ++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L+ +T V+ ++WDT
Sbjct: 9 MLQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLDAQTTVKFEIWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVVVYD+ S WI E++ + ++II L GNK D
Sbjct: 69 AGQERYKSLAPMYYRNANCAVVVYDITQPSSLDKAKAWIRELQRQADPNIIIALAGNKAD 128
Query: 126 LVE-KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
L +R V+ EE E ++E N++F+ETSAK N+ LF IA LP
Sbjct: 129 LASTRRAVATEEAEKYAQEENLLFLETSAKDSSNVSELFTMIARKLP 175
>gi|315040105|ref|XP_003169430.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
gi|311346120|gb|EFR05323.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
Length = 216
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 129/215 (60%), Gaps = 17/215 (7%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYL-EDRTVRLQ 61
P + A++KLV LG+ +VGK+S++ RF+ D+FD+ ++TIG FL++T+ L E TV+ +
Sbjct: 10 PSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFE 69
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AVVVYD+ S W+ E++ + ++II L G
Sbjct: 70 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAG 129
Query: 122 NKTDLV----EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV +KR + + A ++E ++F ETSAK N++ LF IA LP G
Sbjct: 130 NKLDLVNESPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGP 189
Query: 174 ETLSSTKQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
L + + V+LR + N +Q CSC
Sbjct: 190 RNLRANPRP---GVDLRPESAN-----TQGGACSC 216
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 28 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF W+ E+ + +++I L GNK DL
Sbjct: 88 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 147
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V +E + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 148 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 191
>gi|70953492|ref|XP_745844.1| Rab1 protein [Plasmodium chabaudi chabaudi]
gi|56526291|emb|CAH76774.1| Rab1 protein, putative [Plasmodium chabaudi chabaudi]
Length = 207
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 8/201 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YK++ +GD VGK+ I+ RF D F +Y TIG+DF +T+ ++D+ V+LQ+WDTAGQE
Sbjct: 13 YKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTLKVDDKVVKLQIWDTAGQE 72
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ +Y R + +++YD R SFL+ + W+ E+ D +LVGNK D ++
Sbjct: 73 RFRTITSAYYRGADGIIIIYDTTDRNSFLHINDWMTEINKYTNEDTCKLLVGNKFDCKDE 132
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL--PGMETLSSTKQEEMVDV 187
+V EGE+K++ELN+ FIETSAK N++ F I L + + V
Sbjct: 133 IEVPTAEGESKAKELNIPFIETSAKDSLNVELAFTMITQELIKKKKKKNINPANNNQAKV 192
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
NL +S Q+S CSC
Sbjct: 193 NL------SSDDVDQNSLCSC 207
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF W+ E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V +E + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 190
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 109/169 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S+ RF+ +F + ++TIG FL++T+ + + TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLSLRFVRGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ + SF KW+ E++ + ++++ L GNK DL KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSAKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
+V EEG++ + E + F+ETSAK N+ LF +IA LP + +T
Sbjct: 132 KVEAEEGQSYAEENGLFFMETSAKTAQNVNELFYEIARKLPKAQPAQAT 180
>gi|209880089|ref|XP_002141484.1| Ras family protein [Cryptosporidium muris RN66]
gi|209557090|gb|EEA07135.1| Ras family protein [Cryptosporidium muris RN66]
Length = 219
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 118/186 (63%), Gaps = 5/186 (2%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQE 69
KLV LGD SVGK+ ++ RF D+F + TIG F+++++ ++D V+ ++WDTAGQE
Sbjct: 15 KLVLLGDASVGKSCLVVRFAKDEFSEYQEPTIGAAFMTQSVNIDDDYIVKFEIWDTAGQE 74
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
R+RSL P Y R ++ A+VVYD+ + SF WI E+++ +D++I LVGNK DL
Sbjct: 75 RYRSLAPMYYRGAAAAIVVYDITNSDSFDGAKSWISELKSINNNDIVIALVGNKCDLEGN 134
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN- 188
R VS E ++E +++++ETSAK G N++ +F +IA LP + + + D N
Sbjct: 135 RTVSSEIARCYAKENDILYLETSAKTGHNVQEIFEEIARKLPNSKRFD---RSDFSDPNK 191
Query: 189 LRSTTG 194
L+ +TG
Sbjct: 192 LKKSTG 197
>gi|73535759|pdb|1Z0D|A Chain A, Gdp-bound Rab5c Gtpase
gi|73535760|pdb|1Z0D|C Chain C, Gdp-bound Rab5c Gtpase
Length = 167
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 109/166 (65%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
++ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDT
Sbjct: 2 SICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AG ER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK D
Sbjct: 62 AGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKAD 121
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
L KR V +E +A + + +++F+ETSAK N+ +F IA LP
Sbjct: 122 LASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLP 167
>gi|328874189|gb|EGG22555.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 108/163 (66%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ F + ++TIG FL++T+ L D TV+ ++WDTAGQ
Sbjct: 9 QFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQ 68
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ +L P Y R + A+VVYD+ S+ SF KW+ E++ + +++I L GNK DL
Sbjct: 69 ERYHTLAPMYYRGAQAAIVVYDIRSQDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAA 128
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR+V E + + E ++F+ETSAK N+ LF +IA LP
Sbjct: 129 KRKVETAEAQQYAEENGLLFMETSAKTAQNVNELFVEIAKKLP 171
>gi|302781680|ref|XP_002972614.1| rab family GTPase [Selaginella moellendorffii]
gi|300160081|gb|EFJ26700.1| rab family GTPase [Selaginella moellendorffii]
Length = 205
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 111/175 (63%), Gaps = 2/175 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDR-TVRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD + + T+G FLS+T+ L+D TV+ ++WDTAG
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPSSKVTVGASFLSQTIALQDSSTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R +S AVVVYD+ S++SF W+ E++ + +++ LVGNK DL
Sbjct: 91 QERYASLAPLYYRGASAAVVVYDLTSKESFQKAQYWVKELQKHANAGIVLALVGNKADLD 150
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTKQ 181
R VS +E A + ++ F E SAK NI LF +IA LP G +L+ +Q
Sbjct: 151 NLRTVSTDEARAYAESNSMFFTEASAKTAGNINELFEEIAKRLPRGQPSLTVKQQ 205
>gi|320580341|gb|EFW94564.1| GTPase [Ogataea parapolymorpha DL-1]
Length = 849
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 123/197 (62%), Gaps = 11/197 (5%)
Query: 15 LGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLE-DRTVRLQLWDTAGQERFRS 73
LG+ +VGK+SI+ RF+ D F ++ ++TIG FL++T+ ++ + TV+ ++WDTAGQER+RS
Sbjct: 661 LGESAVGKSSIVHRFVKDSFTDSRESTIGAAFLTQTIQIDANTTVKFEIWDTAGQERYRS 720
Query: 74 LIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVS 133
L Y R++ A+VV+D+ S WI E++ + S ++I LVGNK DL E+R++S
Sbjct: 721 LASMYYRNAQAALVVFDITQESSLDKAKYWIKELQKQASSGIVIALVGNKLDLEEERKIS 780
Query: 134 IEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--EEMVDVNLRS 191
+E +A + EL +M+ E SAK G +K F+ IA LP E LS Q VD+N R
Sbjct: 781 KDEAQAFANELGLMYAEVSAKTGEKVKDCFKDIALKLPLEEKLSQQGQRRRRTVDLNQRP 840
Query: 192 TTGNASQSQSQSSGCSC 208
+T N Q C+C
Sbjct: 841 ST-NEQQ-------CAC 849
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 106/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ S SF KW+ E++ + ++++ L GNK+DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKSDLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE + E + F+ETSAK+ N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLP 172
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 107/162 (66%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV LGD +VGK+S + RF+ ++F Q TIG FL++T+ LED V+ ++WDTAGQE
Sbjct: 9 FKLVLLGDAAVGKSSCVERFVKNEFFEFQQPTIGAAFLTQTIPLEDYIVKFEIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
R+RSL P Y R ++ A+VVYD+ SF WI E++ + +D++I L GNK DL +
Sbjct: 69 RYRSLAPMYYRGAAAALVVYDITDPDSFDGAKTWIQELQRQGAADIVIGLAGNKLDLSSQ 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R++ +E ++ + E +F ETSAK G N++ +F IA LP
Sbjct: 129 RKIDSKEAKSFADENGCIFYETSAKTGANVQEIFVAIAQKLP 170
>gi|66824005|ref|XP_645357.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75014117|sp|Q86JP3.1|RAB5A_DICDI RecName: Full=Ras-related protein Rab-5A
gi|60473482|gb|EAL71426.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 108/167 (64%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ F + ++TIG FL++T+ L D TV+ ++WDTAGQ
Sbjct: 9 QFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQ 68
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ +L P Y R + A+VVYD+ S SF KW+ E++ + +++I L GNK DL
Sbjct: 69 ERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAA 128
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
KR+V E + + E ++F+ETSAK N+ LF +IA LP T
Sbjct: 129 KRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKTPT 175
>gi|384483295|gb|EIE75475.1| hypothetical protein RO3G_00179 [Rhizopus delemar RA 99-880]
Length = 206
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 128/209 (61%), Gaps = 4/209 (1%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VR 59
MA ++KLV LG+ +VGK+S++ RF+ D FD ++TIG FL++T+ L+D T V+
Sbjct: 1 MAQQGKTYQFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVK 60
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVL 119
++WDTAGQER++SL P Y R+++ AVVVYD+ S W++E++ + +++I L
Sbjct: 61 FEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVNELQRQADPNIVIAL 120
Query: 120 VGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
GNK+DL +R + + + + E ++F ETSAK N+ LF IA +P ++ L+ +
Sbjct: 121 AGNKSDLGARRAIETKVAQEYADEAGLLFFETSAKTAENVHDLFLAIAKRMP-LDQLADS 179
Query: 180 KQEEMVDVNLRSTTGNASQSQSQSSGCSC 208
++ +N R + S + ++ C+C
Sbjct: 180 SRKTRNGLNSRGV--DLENSGNNANSCAC 206
>gi|47210398|emb|CAF91320.1| unnamed protein product [Tetraodon nigroviridis]
Length = 210
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 108/165 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 11 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 70
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK D+
Sbjct: 71 GQERYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADI 130
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E + + + +++F+ETSAK N+ +F IA LP
Sbjct: 131 TNKRAVEHQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLP 175
>gi|50291301|ref|XP_448083.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527394|emb|CAG61034.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-- 128
F SL P Y R++ A+VVYDV QSF+ W+ E++ + D+II LVGNK D++E
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELQEQASKDIIIALVGNKIDVLENG 128
Query: 129 -KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDV 187
+R VS EE E + E N++F ETSAK+G NI +F I +P ++T + +
Sbjct: 129 TERSVSREEAEKLAEEENLLFFETSAKSGENITDVFLAIGEKVP-LKTANQANVPNNANE 187
Query: 188 NLRSTTGNASQSQSQSSGCSC 208
N R + + + +S CSC
Sbjct: 188 NQRVDLTSVVNNPAANSSCSC 208
>gi|225712132|gb|ACO11912.1| Ras-related protein Rab-18 [Lepeophtheirus salmonis]
gi|290462753|gb|ADD24424.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KL+ +G+ VGK+S++ RF D FD + ATIG+DF KT+ ++ V+L +WDTA
Sbjct: 7 LTSLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTA 66
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRT-ERGSDVIIVLVGNKTD 125
GQERFR+L PSY R A++VYDV +R SF N W++E+ T D++ +LVGNK D
Sbjct: 67 GQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIVKMLVGNKCD 126
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
L EKR +S EEG+ +R+ +MFIE+SAK ++ F ++
Sbjct: 127 LEEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEEL 167
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 28 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLV 127
QER+ SL P Y R + A+VVYD+ ++ SF W+ E+ + +++I L GNK DL
Sbjct: 88 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 147
Query: 128 EKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R V +E + + E ++F+ETSAK G N+ +F IA LP
Sbjct: 148 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 191
>gi|290561625|gb|ADD38212.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KL+ +G+ VGK+S++ RF D FD + ATIG+DF KT+ ++ V+L +WDTA
Sbjct: 7 LTSLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTA 66
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRT-ERGSDVIIVLVGNKTD 125
GQERFR+L PSY R A++VYDV +R SF N W++E+ T D++ +LVGNK D
Sbjct: 67 GQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIVKMLVGNKCD 126
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 166
L EKR +S EEG+ +R+ +MFIE+SAK ++ F ++
Sbjct: 127 LEEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEEL 167
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 106/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S+ RF+ +F + ++TIG FL++T+ + + TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLALRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ + SF KW+ E++ + ++++ L GNK DL KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSSKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
++ EEG++ + E + F+ETSAK N+ LF +IA LP
Sbjct: 132 KIEAEEGQSYAEENGLFFMETSAKTSQNVNELFYEIARKLP 172
>gi|295789553|pdb|3MJH|A Chain A, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
gi|295789555|pdb|3MJH|C Chain C, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
Length = 168
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 3 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 62
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
G ER+ SL P Y R + A+VVYD+ + +SF W+ E++ + +++I L GNK DL
Sbjct: 63 GLERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 122
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V +E ++ + + +++F+ETSAK N+ +F IA LP
Sbjct: 123 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 167
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 106/163 (65%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ ++WDTAGQ
Sbjct: 15 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVAVDDVTVKFEIWDTAGQ 74
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 75 ERYHSLAPMYYRGAQAAIVVYDITNADTFQRARSWVKELQRQANPNIVIALAGNKADLAS 134
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
K+QV E A + E ++F+ETSAK N+ +F IA LP
Sbjct: 135 KQQVDTNEARAYAEENGLLFMETSAKNAMNVTEIFMAIAKKLP 177
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 109/176 (61%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ + +SF KW+ E++ + ++++ GNK DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
+V+ EE + E + FIETSAK N+ +F +IA LP + + +VD
Sbjct: 132 KVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNPAGMVLVD 187
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ S SF KW+ E++ + ++++ L GNK DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE + E + F+ETSAK N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKRLP 172
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 114/169 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ ++ SF KW+ E++ + ++++ L GNK+DL++ R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
+V+ E+ + ++E + F+ETSAK+ N+ +F +IA LP ++ + +T
Sbjct: 132 KVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
>gi|108863008|gb|ABA99930.2| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
Length = 249
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 104/165 (63%)
Query: 3 PVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 62
P + + KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++
Sbjct: 5 PGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEI 64
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGN 122
WDTAGQER+ SL P Y R ++ A+VVYD+ + SF KW+ E++ + + I+ L GN
Sbjct: 65 WDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGN 124
Query: 123 KTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
K D+VE RQV EE + ++E + F+ETSAK N+ +F +I
Sbjct: 125 KADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIG 169
>gi|13096181|pdb|1HUQ|A Chain A, 1.8a Crystal Structure Of The Monomeric Gtpase Rab5c
(Mouse)
Length = 164
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 108/164 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 1 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 60
Query: 67 GQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDL 126
GQER+ SL P Y R + A+VVYD+ + +F W+ E++ + +++I L GNK DL
Sbjct: 61 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 120
Query: 127 VEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL 170
KR V +E +A + + +++F+ETSAK N+ +F IA L
Sbjct: 121 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 164
>gi|340382595|ref|XP_003389804.1| PREDICTED: ras-related protein Rab-22A-like [Amphimedon
queenslandica]
Length = 195
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 106/166 (63%)
Query: 6 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
AL + KL LG+ VGKT I+ RF+ D F + T+G F +KT+ + D ++ Q+WDT
Sbjct: 2 ALHEVKLCLLGESGVGKTCIVNRFVSDVFSDKEPLTVGAAFSTKTIQVNDHSILFQIWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD 125
AGQE++R L P Y R S+ AVVVYD+ + +SF+ WI E+R ++++ + GNK D
Sbjct: 62 AGQEKYRGLAPMYYRGSAAAVVVYDITNLKSFIEMQSWIQELRQLGPPNLVLAIAGNKLD 121
Query: 126 LVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+ E RQV+ +GE ++ +N +F+E SAK N+K LF +IA +P
Sbjct: 122 ISESRQVTASKGEEYAKSVNAIFMECSAKDDTNVKDLFSRIADTIP 167
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQE 69
KLV LGD SVGK+ ++ RF D+F + TIG F+++++ ++D TV+ ++WDTAGQE
Sbjct: 15 KLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQE 74
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
R+RSL P Y R ++ A+VVYD+ + ++F WI E++ +D+++ LVGNK DL
Sbjct: 75 RYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYDLESS 134
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
R V E ++E ++ ETSAK G+N++ LF +IA LP + L S
Sbjct: 135 RTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPNTKKLDSN 184
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 109/176 (61%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ + +SF KW+ E++ + ++++ GNK DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVD 186
+V+ EE + E + FIETSAK N+ +F +IA LP + + +VD
Sbjct: 132 KVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNPAGMVLVD 187
>gi|242006074|ref|XP_002423881.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507127|gb|EEB11143.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 215
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +D TV+ ++WDTAGQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICDDDLTVKFEIWDTAGQ 80
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+ SL P Y R + A+VVYD+ + +F W+ E++ +++I L GNK DL +
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDIQNMDTFGKAKSWVKELQRHASPNIVIALAGNKADLSD 140
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E +A +++ ++F+ETSAK N+ +F IA LP E
Sbjct: 141 KRMVETDEAQAYAQDHGLLFMETSAKTAMNVNEIFLAIAKKLPKNE 186
>gi|170586982|ref|XP_001898258.1| Ras-related protein Rab-26 [Brugia malayi]
gi|158594653|gb|EDP33237.1| Ras-related protein Rab-26, putative [Brugia malayi]
Length = 211
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 114/181 (62%), Gaps = 4/181 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ ++ +GD GKT ++ RF D F +N + +T+GID+ +K + + D V+LQ+WDTAGQ
Sbjct: 19 FTVMLIGDSCCGKTCLLVRFKDDAFLNNNFISTVGIDYRNKLIKVNDAKVKLQIWDTAGQ 78
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ERF ++ +Y RD+ ++VYD+ +RQSF+N W+ ++ V+I LVGNK DL
Sbjct: 79 ERFLAITTTYYRDADALLLVYDLTNRQSFINIRDWLTRIKENAKETVLITLVGNKMDLQR 138
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE---EMV 185
R+V EEG+ + N+ FIETSAK+G N+K F+ IA L M+ S K + E+V
Sbjct: 139 GRKVKYEEGKQLAEAYNIAFIETSAKSGQNVKETFQDIARKLVKMKNGESVKSKSAIELV 198
Query: 186 D 186
D
Sbjct: 199 D 199
>gi|7767071|pdb|1EK0|A Chain A, Gppnhp-Bound Ypt51 At 1.48 A Resolution
Length = 170
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE-- 128
F SL P Y R++ A+VVYDV QSF+ W+ E+ + D+II LVGNK D ++
Sbjct: 65 FASLAPXYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDXLQEG 124
Query: 129 -KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V+ EEGE + E ++F ETSAK G N+ +F I +P
Sbjct: 125 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 114/184 (61%), Gaps = 5/184 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K++ +GD VGK+ ++ RF D + ++Y +TIG+DF KT+ +ED+ ++LQ+WDTAGQE
Sbjct: 9 FKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + ++VYDV R SF N WI E+ DV +L+GNK DL
Sbjct: 69 RFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNKIDLKND 128
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPG---METLSSTKQEEMVD 186
R VS EEG+ + N+ F+ETSAK N++ F+ +A + ET++ K ++
Sbjct: 129 RNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYEIKNKSQHETINKGKTN--IN 186
Query: 187 VNLR 190
+N R
Sbjct: 187 LNAR 190
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 4/178 (2%)
Query: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
MA S +KL+ +GD VGKT I+ RF D F+ T+ +TIGIDF KT L + ++L
Sbjct: 1 MAKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKIKL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Q+WDTAGQERF ++ SY R++ ++VYDV + +SF N +KW+ ++ +V +++
Sbjct: 61 QIWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLQNIQEHAAEEVDKMIL 120
Query: 121 GNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL----PGME 174
GNK D+ +KR +S E+GEA SRE + F+ETSAK NI+ F +A ++ PG+E
Sbjct: 121 GNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFMDLAESILERTPGVE 178
>gi|50234889|ref|NP_940892.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910891|ref|NP_001191812.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910893|ref|NP_001191813.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910895|ref|NP_001191814.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910897|ref|NP_001191815.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|332261797|ref|XP_003279953.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Nomascus
leucogenys]
gi|332261799|ref|XP_003279954.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Nomascus
leucogenys]
gi|332261801|ref|XP_003279955.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Nomascus
leucogenys]
gi|332817855|ref|XP_003339099.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|332817859|ref|XP_003310046.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Pan troglodytes]
gi|410037466|ref|XP_003950231.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|426342028|ref|XP_004036318.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Gorilla gorilla
gorilla]
gi|426342030|ref|XP_004036319.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Gorilla gorilla
gorilla]
gi|74727944|sp|Q86YS6.1|RAB43_HUMAN RecName: Full=Ras-related protein Rab-43; AltName: Full=Ras-related
protein Rab-41
gi|27549389|gb|AAO17291.1| RAB43 [Homo sapiens]
gi|38382891|gb|AAH62319.1| RAB43, member RAS oncogene family [Homo sapiens]
gi|119599689|gb|EAW79283.1| hCG2022580, isoform CRA_f [Homo sapiens]
gi|158255464|dbj|BAF83703.1| unnamed protein product [Homo sapiens]
gi|383413231|gb|AFH29829.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|384941264|gb|AFI34237.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|410219510|gb|JAA06974.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410251892|gb|JAA13913.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410301460|gb|JAA29330.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410331215|gb|JAA34554.1| RAB43, member RAS oncogene family [Pan troglodytes]
Length = 212
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 123/202 (60%), Gaps = 11/202 (5%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD SVGKT ++ RF F +TIG+DF KT+ ++ + V+LQ+WDTAGQE
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R ++ A++ YD+ R SFL+ WI++VR GS+++ +L+GNK+DL E
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSEL 138
Query: 130 RQVSIEEGEAKSRELNVMF-IETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQEEMVD 186
R+VS+ E ++ + +++ IETSAK N++ F ++A L L S K + +
Sbjct: 139 REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQ 198
Query: 187 VNLRSTTGNASQSQSQSSGCSC 208
+N S+ + GC C
Sbjct: 199 LN--------SKDIGEGWGCGC 212
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 103/161 (63%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ S +SF KW+ E++ + ++++ L GNK DL +KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE + E + F ETSAK N+ F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLP 172
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 109/169 (64%), Gaps = 1/169 (0%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQE 69
KLV LGD SVGK+ ++ RF D+F + TIG F+++++ ++D TV+ ++WDTAGQE
Sbjct: 15 KLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQE 74
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
R+RSL P Y R ++ A+VVYD+ + ++F WI E++ +D+++ LVGNK DL
Sbjct: 75 RYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYDLESS 134
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
R V E ++E ++ ETSAK G+N++ LF +IA LP + L S
Sbjct: 135 RTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPNTKKLDS 183
>gi|148232808|ref|NP_001084521.1| RAB5B, member RAS oncogene family [Xenopus laevis]
gi|46250314|gb|AAH68736.1| MGC81204 protein [Xenopus laevis]
Length = 185
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 109/163 (66%)
Query: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++WD
Sbjct: 16 SKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWD 75
Query: 65 TAGQERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKT 124
TAGQER+ SL P Y R + A+VVYD+ ++++F W+ E++ + +++I L GNK
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKA 135
Query: 125 DLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 167
DL KR V EE +A + + +++F+ETSAK N+ LF I
Sbjct: 136 DLTSKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIG 178
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 103/161 (63%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K V LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 67
Query: 71 FRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKR 130
+ SL P Y R ++ A++VYD+ S SF KW+ E++ + ++++ L GNK DL +KR
Sbjct: 68 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 127
Query: 131 QVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE + E + F+ETSAK N+ +F +IA LP
Sbjct: 128 EVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLP 168
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +TV+LQ+WDTAGQE
Sbjct: 37 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTAGQE 96
Query: 70 RFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEK 129
RFR++ SY R + ++VYDV R+SF N W+ E+ V +LVGNK DL K
Sbjct: 97 RFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCDLTSK 156
Query: 130 RQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 189
R V+ EEG+ + N+ FIETSAK N++ F +A+ + + +Q+ + N+
Sbjct: 157 RTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKA--RVQVNQQQSRPNANV 214
Query: 190 RSTTGNASQSQSQSSGCS 207
R G + +S SSGC
Sbjct: 215 R--LGPSQPVRSVSSGCC 230
>gi|32492054|gb|AAP85299.1| Rab5, partial [Babesia bovis]
Length = 208
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 109/163 (66%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+++LV LGD SVGK+S+ RF+ + F ++TIG F+++++ L+D TV+ ++WDTAGQ
Sbjct: 18 QFELVILGDTSVGKSSLDGRFVRNTFLEFQESTIGAAFMTQSVSLDDCTVKFEIWDTAGQ 77
Query: 69 ERFRSLIPSYIRDSSVAVVVYDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVE 128
ER+R+L P Y R SS AV+VYD+ +SF WI E++ G +V++ L GNK DL
Sbjct: 78 ERYRTLAPMYYRGSSAAVIVYDITMHESFQQAKGWIQELQAHVGPNVVLALAGNKVDLDS 137
Query: 129 KRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALP 171
R+VS E E + N +F+ETSAK G ++ LF +IA A+P
Sbjct: 138 SREVSREVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIP 180
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,710,700,074
Number of Sequences: 23463169
Number of extensions: 97072545
Number of successful extensions: 345139
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17113
Number of HSP's successfully gapped in prelim test: 7725
Number of HSP's that attempted gapping in prelim test: 307730
Number of HSP's gapped (non-prelim): 25706
length of query: 208
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 72
effective length of database: 9,168,204,383
effective search space: 660110715576
effective search space used: 660110715576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)